Citrus Sinensis ID: 035786
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 693 | 2.2.26 [Sep-21-2011] | |||||||
| C0LGK4 | 915 | Probable LRR receptor-lik | yes | no | 0.940 | 0.712 | 0.532 | 0.0 | |
| Q42371 | 976 | LRR receptor-like serine/ | no | no | 0.784 | 0.557 | 0.327 | 7e-64 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.773 | 0.486 | 0.313 | 9e-61 | |
| C0LGQ5 | 1249 | LRR receptor-like serine/ | no | no | 0.821 | 0.455 | 0.308 | 4e-60 | |
| Q9FIZ3 | 1252 | LRR receptor-like serine/ | no | no | 0.731 | 0.404 | 0.306 | 1e-59 | |
| C0LGW6 | 966 | LRR receptor-like serine/ | no | no | 0.790 | 0.567 | 0.324 | 2e-58 | |
| Q9LHP4 | 1141 | Receptor-like protein kin | no | no | 0.790 | 0.480 | 0.309 | 1e-57 | |
| C0LGV1 | 1135 | LRR receptor-like serine/ | no | no | 0.767 | 0.468 | 0.312 | 4e-57 | |
| Q9LJF3 | 1164 | Receptor-like protein kin | no | no | 0.809 | 0.481 | 0.302 | 6e-57 | |
| Q9LVP0 | 1102 | Probable leucine-rich rep | no | no | 0.743 | 0.467 | 0.328 | 3e-56 |
| >sp|C0LGK4|Y2165_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1 | Back alignment and function desciption |
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Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/663 (53%), Positives = 457/663 (68%), Gaps = 11/663 (1%)
Query: 26 QRSALLDLRSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFA 85
++ LL+LRSSLGLR DWP++ +PC WRG+QC+NG +I INISGF+RTRIG+LNP+F+
Sbjct: 36 EKLILLNLRSSLGLRGTDWPIKGDPCVDWRGIQCENGSIIGINISGFRRTRIGKLNPQFS 95
Query: 86 VDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLN 145
VD L NLT LS FNASGL+LPG+IPEWFG L AL+VLDL SCS++G +P + GNL+ L
Sbjct: 96 VDPLRNLTRLSYFNASGLALPGTIPEWFGVSLLALEVLDLSSCSVNGVVPFTLGNLTSLR 155
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
L LS NSL VP++LG+L LS LDLSRN TG +P + S L NL L+++SN+ TG
Sbjct: 156 TLNLSQNSLTSLVPSSLGQLLNLSQLDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGP 215
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLA 265
IP GL +LS + LN S N+ + IPSE+G+L L++ DLS NS+SGS+P ELR L L
Sbjct: 216 IPPGLGALSKLIHLNFSSNSFSSPIPSELGDLVNLVDFDLSINSLSGSVPQELRKLSKLQ 275
Query: 266 KLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG 325
+ I +N L G L LF QLQ + L N G+LP + P LR LD+++NN TG
Sbjct: 276 LMAIGDNLLSGTLPVDLFSAESQLQTLVLRENGFSGSLPDVCWSLPKLRILDIAKNNFTG 335
Query: 326 SWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADD-RGRNVSL 384
P S + + + +IS+N YG+L + R+F ++DLS NYF+G + D G NVS+
Sbjct: 336 LLPYSSYDSDQIAEMVDISSNTFYGEL-TPILRRFRIMDLSGNYFEGKLPDYVTGENVSV 394
Query: 385 GRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHEEKSSKRWIFILVGVF 444
NCL++ Q+ S C FY RGL FD+FG QP S+R + IL V
Sbjct: 395 TSNCLRNERRQKPSAICAAFYKSRGLDFDDFGRPNLTQPTSKNASSGISRRTVIILAAVG 454
Query: 445 GGLGFI---AILVIVLVLILRRCDKGIANQRGSANVGPVPEGH-STPPPKDPAI--VSGV 498
GG+ FI IL I+LVL +R + A QRG+ N P P G S PPK +S +
Sbjct: 455 GGVAFILLFVILPIILVLCMRHRRR--AAQRGN-NDRPKPAGEASQQPPKGAQTFDLSRL 511
Query: 499 GDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMEL 558
G++F+YEQLL+AT F++ NLIK+GHSG+LF+G L G VV+KK+ + K E Y+ EL
Sbjct: 512 GNAFSYEQLLQATEEFNDANLIKRGHSGNLFRGFLENGIPVVIKKIDVREGKSEGYISEL 571
Query: 559 DLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITR 618
+LFS+ H RLVP LG CLE+E++K LVYK+M GDLASSL R ++ E D L+SLDWITR
Sbjct: 572 ELFSKAGHQRLVPFLGHCLENESQKFLVYKFMRHGDLASSLFRKSENEGDGLKSLDWITR 631
Query: 619 LKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLT 678
LKIA+GAAEGLSYLHHEC+PPLVHRDVQASSILLDDKFEVRLGSLSE +AQGD++Q+ ++
Sbjct: 632 LKIALGAAEGLSYLHHECSPPLVHRDVQASSILLDDKFEVRLGSLSEAYAQGDAYQSRIS 691
Query: 679 RFL 681
R L
Sbjct: 692 RLL 694
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q42371|ERECT_ARATH LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1 | Back alignment and function description |
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Score = 245 bits (626), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 206/629 (32%), Positives = 300/629 (47%), Gaps = 85/629 (13%)
Query: 77 IGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPG 136
+G ++P L LT L F+ SL GSIPE G A QVLDL L+G IP
Sbjct: 201 VGNISP-----DLCQLTGLWYFDVRNNSLTGSIPETIG-NCTAFQVLDLSYNQLTGEIPF 254
Query: 137 SFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLT--- 193
G L ++ L L GN L+G +P+ +G ++ L+ LDLS NLL+G IP +LGNLT
Sbjct: 255 DIGFL-QVATLSLQGNQLSGKIPSVIGLMQALAVLDLSGNLLSGSIP---PILGNLTFTE 310
Query: 194 RLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGS 253
+L L SN TG IP L ++S + +L L+DN LTG IP E+G L L +L+++ N + G
Sbjct: 311 KLYLHSNKLTGSIPPELGNMSKLHYLELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGP 370
Query: 254 LPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNL 313
+P L NL L + N G + F L+ + ++LS N + G +P L NL
Sbjct: 371 IPDHLSSCTNLNSLNVHGNKFSGTIPRA-FQKLESMTYLNLSSNNIKGPIPVELSRIGNL 429
Query: 314 RFLDLSRNNITGSWPILSTNGNASGAV-FNISNNMLYGDL--NSSSFRKFSLIDLSSNYF 370
LDLS N I G P S+ G+ + N+S N + G + + + R IDLS+N
Sbjct: 430 DTLDLSNNKINGIIP--SSLGDLEHLLKMNLSRNHITGVVPGDFGNLRSIMEIDLSNNDI 487
Query: 371 QGTVADDRGR----------------NVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDN 414
G + ++ + NV NCL S+ S + + + F
Sbjct: 488 SGPIPEELNQLQNIILLRLENNNLTGNVGSLANCL-SLTVLNVSHNNLVGDIPKNNNFSR 546
Query: 415 FGVLEPMQPP--------VPQHEEKSSKRWIFILVGVFG-GLGFIAILVIVLVLILRRCD 465
F + P P H+ + + R + G +G + IL++VL+ R
Sbjct: 547 FSPDSFIGNPGLCGSWLNSPCHDSRRTVRVSISRAAILGIAIGGLVILLMVLIAACRP-- 604
Query: 466 KGIANQRGSANVGPVPEGHSTPPPKDPAIVSGVGDS-------------FTYEQLLRATG 512
H+ PP D ++ V S YE ++R T
Sbjct: 605 ------------------HNPPPFLDGSLDKPVTYSTPKLVILHMNMALHVYEDIMRMTE 646
Query: 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKK-ESYMMELDLFSRVSHARLVP 571
N SE +I G S ++K L V +K++ H+ + + + EL++ S + H LV
Sbjct: 647 NLSEKYIIGHGASSTVYKCVLKNCKPVAIKRLYSHNPQSMKQFETELEMLSSIKHRNLVS 706
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
L L H LL Y Y+ G L LH T ++LDW TRLKIA GAA+GL+Y
Sbjct: 707 LQAYSLSH-LGSLLFYDYLENGSLWDLLHGPT-----KKKTLDWDTRLKIAYGAAQGLAY 760
Query: 632 LHHECNPPLVHRDVQASSILLDDKFEVRL 660
LHH+C+P ++HRDV++S+ILLD E RL
Sbjct: 761 LHHDCSPRIIHRDVKSSNILLDKDLEARL 789
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Receptor kinase that, together with ERL1 and ERL2, regulates aerial architecture, including inflorescence (e.g. shoot apical meristem-originating organ shape, elongation of the internode and pedicels, and adaxial-abaxial polarity), and stomatal patterning (e.g. density and clustering), probably by tuning cell division and expansion. Modulates plant transpiration efficiency by controlling stomatal density, leaf photosynthetic capacity, epidermal cell expansion, mesophyll cell proliferation and cell-cell contact. Probable major trait regulating canalization (maintenance of phenotype despite varying environment) in many aspect of the plant physiology (e.g. plant morphology, light-dependent leaves number, branch number, flowering time, phytate and mineral concentrations) by transducing microenvironmental variation into phenotypic differentiation (ecological amplifier). May maintain development integrity in heat stress conditions. Regulates cell wall composition and structure. Confers resistance to the pathogenic bacteria Ralstonia solanacearum and to the necrotrophic fungi Plectosphaerella cucumerina and Pythium irregulare, and required for callose deposition upon infection. Resistance to P.cucumerina seems cell wall-mediated. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 235 bits (599), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 180/574 (31%), Positives = 281/574 (48%), Gaps = 38/574 (6%)
Query: 105 LPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGE 164
L G IP G+ VLD+ + SLSG IP F L +L L N L+GN+P L
Sbjct: 391 LEGKIPPLIGF-YSNFSVLDMSANSLSGPIPAHFCRFQTLILLSLGSNKLSGNIPRDLKT 449
Query: 165 LKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDN 224
K L+ L L N LTG +P + L NLT L L N+ +G I + L L +++ L L++N
Sbjct: 450 CKSLTKLMLGDNQLTGSLPIELFNLQNLTALELHQNWLSGNISADLGKLKNLERLRLANN 509
Query: 225 ALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFP 284
TG IP E+GNL K++ ++S N ++G +P EL + +L +S N G +++ L
Sbjct: 510 NFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSGNKFSGYIAQEL-G 568
Query: 285 TLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNIS 344
L L+++ LS N+L G +P + L L L N ++ + P+ + NIS
Sbjct: 569 QLVYLEILRLSDNRLTGEIPHSFGDLTRLMELQLGGNLLSENIPVELGKLTSLQISLNIS 628
Query: 345 NNMLYGDLNSS--SFRKFSLIDLSSNYFQGTVADDRGRNVSLGRNCLQSVASQRSSEDCR 402
+N L G + S + + ++ L+ N G + G +SL + + + D
Sbjct: 629 HNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPASIGNLMSLLICNISNNNLVGTVPDTA 688
Query: 403 LFYAERGLTF-DNFGVLEPM----QPPVPQHEEK-------SSKRWIFILVGVFGGLGFI 450
+F F N G+ QP VP + K S ++ I + + G F+
Sbjct: 689 VFQRMDSSNFAGNHGLCNSQRSHCQPLVPHSDSKLNWLINGSQRQKILTITCIVIGSVFL 748
Query: 451 AILVIVLVLILRRCDKGIANQRGSANVGPVPEGHSTPPPKDPAIVSGVGDSFTYEQLLRA 510
+ + I RR +A E + P D G FTY+ L+ A
Sbjct: 749 ITFLGLCWTIKRREPAFVA-----------LEDQTKPDVMDSYYFPKKG--FTYQGLVDA 795
Query: 511 TGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLH---SFKKESYMMELDLFSRVSHA 567
T NFSE ++ +G G ++K ++GG + VKK++ + S+ E+ ++ H
Sbjct: 796 TRNFSEDVVLGRGACGTVYKAEMSGGEVIAVKKLNSRGEGASSDNSFRAEISTLGKIRHR 855
Query: 568 RLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE 627
+V L G C H+ LL+Y+YM G L L R E + L LDW R +IA+GAAE
Sbjct: 856 NIVKLYGFCY-HQNSNLLLYEYMSKGSLGEQLQRG---EKNCL--LDWNARYRIALGAAE 909
Query: 628 GLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
GL YLHH+C P +VHRD+++++ILLD++F+ +G
Sbjct: 910 GLCYLHHDCRPQIVHRDIKSNNILLDERFQAHVG 943
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 233 bits (594), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 195/632 (30%), Positives = 285/632 (45%), Gaps = 63/632 (9%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVL 147
S+G L L+ + L G +P G L +LDL LSGSIP SFG L L L
Sbjct: 475 SIGRLKELNLLHLRQNELVGGLPASLG-NCHQLNILDLADNQLSGSIPSSFGFLKGLEQL 533
Query: 148 YLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG-----------------------EIPN 184
L NSL GN+P +L L+ L+ ++LS N L G EIP
Sbjct: 534 MLYNNSLQGNLPDSLISLRNLTRINLSHNRLNGTIHPLCGSSSYLSFDVTNNGFEDEIPL 593
Query: 185 AISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELD 244
+ NL RL L N TG+IP L + + L++S NALTG IP ++ KL +D
Sbjct: 594 ELGNSQNLDRLRLGKNQLTGKIPWTLGKIRELSLLDMSSNALTGTIPLQLVLCKKLTHID 653
Query: 245 LSKNSISGSLPLELRGLRNLAKLVISEN-------------------GLEGQLSEGLFP- 284
L+ N +SG +P L L L +L +S N L+G G P
Sbjct: 654 LNNNFLSGPIPPWLGKLSQLGELKLSSNQFVESLPTELFNCTKLLVLSLDGNSLNGSIPQ 713
Query: 285 ---TLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVF 341
L L V++L N+ G+LP + L L LSRN++TG P+ +
Sbjct: 714 EIGNLGALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRNSLTGEIPVEIGQLQDLQSAL 773
Query: 342 NISNNMLYGDLNSS--SFRKFSLIDLSSNYFQGTVADDRGRNVSLG------RNCLQSVA 393
++S N GD+ S+ + K +DLS N G V G SLG N +
Sbjct: 774 DLSYNNFTGDIPSTIGTLSKLETLDLSHNQLTGEVPGSVGDMKSLGYLNVSFNNLGGKLK 833
Query: 394 SQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHEEKSSKRWIFILVGVFGGLGFIAIL 453
Q S F GL ++ Q + S R + +++ L I ++
Sbjct: 834 KQFSRWPADSFLGNTGLCGSPLSRCNRVRSNNKQ--QGLSARSV-VIISAISALTAIGLM 890
Query: 454 VIVLVLILRRCDKGIANQRGSANVGPVPEGHSTPPPKDPAIVSGVGDS-FTYEQLLRATG 512
++V+ L ++ + G + S+ P +G S +E ++ AT
Sbjct: 891 ILVIALFFKQ-RHDFFKKVGHGSTAYTSSSSSSQATHKPLFRNGASKSDIRWEDIMEATH 949
Query: 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLV 570
N SE +I G SG ++K L G TV VKK+ +S+ E+ R+ H LV
Sbjct: 950 NLSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMSNKSFSREVKTLGRIRHRHLV 1009
Query: 571 PLLGQCL-EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGL 629
L+G C + E LL+Y+YM G + LH + + + LDW RL+IA+G A+G+
Sbjct: 1010 KLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGV 1069
Query: 630 SYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
YLHH+C PP+VHRD+++S++LLD E LG
Sbjct: 1070 EYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLG 1101
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Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FIZ3|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 176/575 (30%), Positives = 272/575 (47%), Gaps = 68/575 (11%)
Query: 97 SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAG 156
SF+ + G IP G + L L L +G IP +FG +S L++L +S NSL+G
Sbjct: 580 SFDVTENGFEGDIPLELG-KSTNLDRLRLGKNQFTGRIPRTFGKISELSLLDISRNSLSG 638
Query: 157 NVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSI 216
+P LG KKL+++DL+ N L+G IP + L L L L+SN F G +P+ ++SL++I
Sbjct: 639 IIPVELGLCKKLTHIDLNNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIFSLTNI 698
Query: 217 QFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276
L L N+L G IP E+GNL L L+L +N +SG LP + L L +L +S N L G
Sbjct: 699 LTLFLDGNSLNGSIPQEIGNLQALNALNLEENQLSGPLPSTIGKLSKLFELRLSRNALTG 758
Query: 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNA 336
++ + D +DLS N G +P+T+ P L LDLS N + G P
Sbjct: 759 EIPVEIGQLQDLQSALDLSYNNFTGRIPSTISTLPKLESLDLSHNQLVGEVP-------- 810
Query: 337 SGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRGRNVSLGRNCLQSVASQR 396
G + GD+ S + ++LS N +G + Q
Sbjct: 811 -GQI---------GDMKSLGY-----LNLSYNNLEG------------------KLKKQF 837
Query: 397 SSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHEEKSSKRW------IFILVGVFGGLGFI 450
S F GL P+ SK +++ L I
Sbjct: 838 SRWQADAFVGNAGLC----------GSPLSHCNRAGSKNQRSLSPKTVVIISAISSLAAI 887
Query: 451 AILVIVLVLILRRCDKGIANQRGSANVGPVPEGHSTPPPKDPAIVSGVGDS-FTYEQLLR 509
A++V+V++L ++ RG G ++ + P +G S ++ ++
Sbjct: 888 ALMVLVIILFFKQNHDLFKKVRG----GNSAFSSNSSSSQAPLFSNGGAKSDIKWDDIME 943
Query: 510 ATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHS--FKKESYMMELDLFSRVSHA 567
AT +E +I G SG ++K L G T+ VKK+ +S+ E+ + H
Sbjct: 944 ATHYLNEEFMIGSGGSGKVYKAELKNGETIAVKKILWKDDLMSNKSFNREVKTLGTIRHR 1003
Query: 568 RLVPLLGQCL-EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAA 626
LV L+G C + + LL+Y+YM G + LH + + + L W TRLKIA+G A
Sbjct: 1004 HLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEV--LGWETRLKIALGLA 1061
Query: 627 EGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
+G+ YLH++C PP+VHRD+++S++LLD E LG
Sbjct: 1062 QGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLG 1096
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Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Involved in the nuclear division phase of megagametogenesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGW6|ERL1_ARATH LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 194/597 (32%), Positives = 293/597 (49%), Gaps = 49/597 (8%)
Query: 92 LTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSG 151
LT L F+ G +L G+IPE G + Q+LD+ ++G IP + G L ++ L L G
Sbjct: 214 LTGLWYFDVRGNNLTGTIPESIG-NCTSFQILDISYNQITGEIPYNIGFL-QVATLSLQG 271
Query: 152 NSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLT---RLNLASNFFTGQIPS 208
N L G +P +G ++ L+ LDLS N L G IP +LGNL+ +L L N TG IPS
Sbjct: 272 NRLTGRIPEVIGLMQALAVLDLSDNELVGPIP---PILGNLSFTGKLYLHGNMLTGPIPS 328
Query: 209 GLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLV 268
L ++S + +L L+DN L G IP E+G L++L EL+L+ N + G +P + L +
Sbjct: 329 ELGNMSRLSYLQLNDNKLVGTIPPELGKLEQLFELNLANNRLVGPIPSNISSCAALNQFN 388
Query: 269 ISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP 328
+ N L G + F L L ++LS N G +P L NL LDLS NN +GS P
Sbjct: 389 VHGNLLSGSIPLA-FRNLGSLTYLNLSSNNFKGKIPVELGHIINLDKLDLSGNNFSGSIP 447
Query: 329 ILSTNGNASGA-VFNISNNMLYGDLNSS--SFRKFSLIDLSSNYFQGTVADDRGRNVSLG 385
+ T G+ + N+S N L G L + + R +ID+S N G + + G+ +L
Sbjct: 448 L--TLGDLEHLLILNLSRNHLSGQLPAEFGNLRSIQMIDVSFNLLSGVIPTELGQLQNLN 505
Query: 386 RNCLQSVASQRSSED----CRLFYAERGLTFDNF-GVLEPMQ------PPVPQHEEKSSK 434
L + D C ++F+N G++ PM+ P
Sbjct: 506 SLILNNNKLHGKIPDQLTNC-FTLVNLNVSFNNLSGIVPPMKNFSRFAPASFVGNPYLCG 564
Query: 435 RWIFILVG------VFGGLGFIAILVIVLVLILRRCDKGIANQRGSANVGPVPEGHSTPP 488
W+ + G VF I I++ V+ L+ C +A + S + +G S
Sbjct: 565 NWVGSICGPLPKSRVFSRGALICIVLGVITLL---CMIFLAVYK-SMQQKKILQGSSKQA 620
Query: 489 PKDPAIVSGVGDS--FTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKV-S 545
+V D T++ ++R T N +E +I G S ++K L + +K++ +
Sbjct: 621 EGLTKLVILHMDMAIHTFDDIMRVTENLNEKFIIGYGASSTVYKCALKSSRPIAIKRLYN 680
Query: 546 LHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDL 605
+ + EL+ + H +V L G L T LL Y YM G L LH
Sbjct: 681 QYPHNLREFETELETIGSIRHRNIVSLHGYALS-PTGNLLFYDYMENGSLWDLLH----- 734
Query: 606 EDDSLQS--LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660
SL+ LDW TRLKIA+GAA+GL+YLHH+C P ++HRD+++S+ILLD+ FE L
Sbjct: 735 --GSLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHL 789
|
Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ER and ERL2. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LHP4|RCH2_ARATH Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 297/644 (46%), Gaps = 96/644 (14%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVL 147
S+G L+ L F S GSIP +L L L +SG IP G L++L +
Sbjct: 341 SIGRLSFLEEFMISDNKFSGSIPTTIS-NCSSLVQLQLDKNQISGLIPSELGTLTKLTLF 399
Query: 148 YLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLT-------------- 193
+ N L G++P L + L LDLSRN LTG IP+ + +L NLT
Sbjct: 400 FAWSNQLEGSIPPGLADCTDLQALDLSRNSLTGTIPSGLFMLRNLTKLLLISNSLSGFIP 459
Query: 194 ----------RLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIEL 243
RL L N TG+IPSG+ SL I FL+ S N L G +P E+G+ +L +
Sbjct: 460 QEIGNCSSLVRLRLGFNRITGEIPSGIGSLKKINFLDFSSNRLHGKVPDEIGSCSELQMI 519
Query: 244 DLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGAL 303
DLS NS+ GSLP + L L L +S N G++ L L L + LS N G++
Sbjct: 520 DLSNNSLEGSLPNPVSSLSGLQVLDVSANQFSGKIPASL-GRLVSLNKLILSKNLFSGSI 578
Query: 304 PATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFS 361
P +L + L+ LDL N ++G P + N+S+N L G + S +S K S
Sbjct: 579 PTSLGMCSGLQLLDLGSNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLNKLS 638
Query: 362 LIDLSSNYFQGTVADDRGRNVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDN--FGVLE 419
++DLS N +G +A ++++ S S + + G DN F L
Sbjct: 639 ILDLSHNMLEGDLAPLAN---------IENLVSLNIS-----YNSFSGYLPDNKLFRQLS 684
Query: 420 PMQPPVPQHEEKSSKRWIFILVGVFGGLG--------------------FIAILVIVLVL 459
P + S++ F+ GLG +L+I+ +
Sbjct: 685 PQDLEGNKKLCSSTQDSCFLTYRKGNGLGDDGDASRTRKLRLTLALLITLTVVLMILGAV 744
Query: 460 ILRRCDKGIANQRGSANVGPVPEGHSTPPPKDPAIVSGVGDSFTYEQLLRATGNFSETNL 519
+ R + I N+R S +G + TP K +F+ +Q++R E N+
Sbjct: 745 AVIRARRNIDNERDS-ELGETYKWQFTPFQK---------LNFSVDQIIRC---LVEPNV 791
Query: 520 IKKGHSGDLFKGTLAGGTTVVVKKV------SLHSFK----KESYMMELDLFSRVSHARL 569
I KG SG +++ + G + VKK+ H K ++S+ E+ + H +
Sbjct: 792 IGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNI 851
Query: 570 VPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGL 629
V LG C T +LL+Y YM G L S LH SLDW R +I +GAA+GL
Sbjct: 852 VRFLGCCWNRNT-RLLMYDYMPNGSLGSLLHERRG------SSLDWDLRYRILLGAAQGL 904
Query: 630 SYLHHECNPPLVHRDVQASSILLDDKFEVRLGS--LSELHAQGD 671
+YLHH+C PP+VHRD++A++IL+ FE + L++L +GD
Sbjct: 905 AYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGD 948
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGV1|RCH1_ARATH LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 206/660 (31%), Positives = 309/660 (46%), Gaps = 128/660 (19%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVL 147
S GNL+ L S ++ GSIP +Q + + +SG IP G L LN+
Sbjct: 342 SFGNLSNLQELMLSSNNITGSIPSILSNCTKLVQ-FQIDANQISGLIPPEIGLLKELNIF 400
Query: 148 YLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIP 207
N L GN+P L + L LDLS+N LTG +P + L NLT+L L SN +G IP
Sbjct: 401 LGWQNKLEGNIPDELAGCQNLQALDLSQNYLTGSLPAGLFQLRNLTKLLLISNAISGVIP 460
Query: 208 SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKL 267
+ + +S+ L L +N +TG IP +G L L LDLS+N++SG +PLE+ R L L
Sbjct: 461 LEIGNCTSLVRLRLVNNRITGEIPKGIGFLQNLSFLDLSENNLSGPVPLEISNCRQLQML 520
Query: 268 VISENGLEGQLSEGLFPTLDQLQVVDLSGNKL------------------------DGAL 303
+S N L+G L L +L +LQV+D+S N L +G +
Sbjct: 521 NLSNNTLQGYLPLSL-SSLTKLQVLDVSSNDLTGKIPDSLGHLISLNRLILSKNSFNGEI 579
Query: 304 PATLFLRPNLRFLDLSRNNITGSWP-----------ILSTNGNASG-------------A 339
P++L NL+ LDLS NNI+G+ P L+ + N+ +
Sbjct: 580 PSSLGHCTNLQLLDLSSNNISGTIPEELFDIQDLDIALNLSWNSLDGFIPERISALNRLS 639
Query: 340 VFNISNNMLYGDLNS-SSFRKFSLIDLSSNYFQGTVADDR-----------GRN--VSLG 385
V +IS+NML GDL++ S +++S N F G + D + G N S G
Sbjct: 640 VLDISHNMLSGDLSALSGLENLVSLNISHNRFSGYLPDSKVFRQLIGAEMEGNNGLCSKG 699
Query: 386 -RNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHEEKSSKRWIFILVGVF 444
R+C S +SQ ++ +RG+ H + + I +G+
Sbjct: 700 FRSCFVSNSSQLTT--------QRGV-----------------HSHR-----LRIAIGLL 729
Query: 445 GGLGFIAILVIVLVLILRRCDKGIANQRGSANVGPVPEGHSTPPPKDPAIVSGVGDSFTY 504
+ A+L ++ VL + R + I + S + TP K +FT
Sbjct: 730 --ISVTAVLAVLGVLAVIRAKQMIRDDNDSETGENLWTWQFTPFQK---------LNFTV 778
Query: 505 EQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKV-----------SLHSFKKES 553
E +L+ E N+I KG SG ++K + + VKK+ + S ++S
Sbjct: 779 EHVLKC---LVEGNVIGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDS 835
Query: 554 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSL 613
+ E+ + H +V LG C T +LL+Y YM G L S LH E + SL
Sbjct: 836 FSAEVKTLGSIRHKNIVRFLGCCWNKNT-RLLMYDYMSNGSLGSLLH-----ERSGVCSL 889
Query: 614 DWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS--LSELHAQGD 671
W R KI +GAA+GL+YLHH+C PP+VHRD++A++IL+ FE +G L++L GD
Sbjct: 890 GWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGD 949
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LJF3|BRL3_ARATH Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 303/621 (48%), Gaps = 60/621 (9%)
Query: 105 LPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG- 163
L G++P G + +L+ +DL +L+G IP L +L+ L + N+L G +P ++
Sbjct: 414 LSGTVPVELG-KCKSLKTIDLSFNALTGLIPKEIWTLPKLSDLVMWANNLTGGIPESICV 472
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD 223
+ L L L+ NLLTG +P +IS N+ ++L+SN TG+IP G+ L + L L +
Sbjct: 473 DGGNLETLILNNNLLTGSLPESISKCTNMLWISLSSNLLTGEIPVGIGKLEKLAILQLGN 532
Query: 224 NALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLA----------KLVISENG 273
N+LTG IPSE+GN LI LDL+ N+++G+LP EL L V +E G
Sbjct: 533 NSLTGNIPSELGNCKNLIWLDLNSNNLTGNLPGELASQAGLVMPGSVSGKQFAFVRNEGG 592
Query: 274 LEGQLSEGLFPTLDQLQVVDLSGNKLDGALPAT-------LFL---RPNLRFLDLSRNNI 323
+ + + GL + ++ L + + P T +++ ++ +LDLS N +
Sbjct: 593 TDCRGAGGLV-EFEGIRAERLEHFPMVHSCPKTRIYSGMTMYMFSSNGSMIYLDLSYNAV 651
Query: 324 TGSWPILSTNGNASGAVFNISNNMLYGDLNSS--SFRKFSLIDLSSNYFQGTVADDRGRN 381
+GS P L V N+ +N+L G + S + ++DLS N QG + G
Sbjct: 652 SGSIP-LGYGAMGYLQVLNLGHNLLTGTIPDSFGGLKAIGVLDLSHNDLQGFLPGSLG-- 708
Query: 382 VSLGRNCLQSVASQRSSEDCRLFYAERGLTF------DNFGVLEPMQPPV-----PQHEE 430
G + L + ++ + + + TF +N G+ PP P
Sbjct: 709 ---GLSFLSDLDVSNNNLTGPIPFGGQLTTFPLTRYANNSGLCGVPLPPCSSGSRPTRSH 765
Query: 431 KSSKRWIFILVGVFGGLGFIAILVIVLVLILRRCDKGIANQRGSAN-VGPVPEGHST--- 486
K+ I G+ G+ F + +++L++ L R K ++ + +P S+
Sbjct: 766 AHPKKQS-IATGMSAGIVFSFMCIVMLIMALYRARKVQKKEKQREKYIESLPTSGSSSWK 824
Query: 487 ------PPPKDPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVV 540
P + A T+ LL AT FS ++I G GD++K LA G+ V
Sbjct: 825 LSSVHEPLSINVATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSVVA 884
Query: 541 VKK-VSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSL 599
+KK + + +M E++ ++ H LVPLLG C E E+LLVY+YM G L + L
Sbjct: 885 IKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGE-ERLLVYEYMKYGSLETVL 943
Query: 600 HRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659
H T LDW R KIAIGAA GL++LHH C P ++HRD+++S++LLD F R
Sbjct: 944 HEKTK---KGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVAR 1000
Query: 660 LGS--LSELHAQGDSHQNVLT 678
+ ++ L + D+H +V T
Sbjct: 1001 VSDFGMARLVSALDTHLSVST 1021
|
Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates. Binds brassinolide. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development. May be involved in cell growth and vascular differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LVP0|Y5639_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Arabidopsis thaliana GN=At5g63930 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 196/597 (32%), Positives = 285/597 (47%), Gaps = 82/597 (13%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
SL G+IP G+ L VLD+ LSG IP S + +L L N+L+GN+P +
Sbjct: 396 SLSGTIPPKLGW-YSDLWVLDMSDNHLSGRIPSYLCLHSNMIILNLGTNNLSGNIPTGIT 454
Query: 164 ELKKLSNLDLSRNLLTGEIPN---------AISL------------LGN---LTRLNLAS 199
K L L L+RN L G P+ AI L +GN L RL LA
Sbjct: 455 TCKTLVQLRLARNNLVGRFPSNLCKQVNVTAIELGQNRFRGSIPREVGNCSALQRLQLAD 514
Query: 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELR 259
N FTG++P + LS + LN+S N LTG +PSE+ N L LD+ N+ SG+LP E+
Sbjct: 515 NGFTGELPREIGMLSQLGTLNISSNKLTGEVPSEIFNCKMLQRLDMCCNNFSGTLPSEVG 574
Query: 260 GLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRF-LDL 318
L L L +S N L G + L L +L + + GN +G++P L L+ L+L
Sbjct: 575 SLYQLELLKLSNNNLSGTIPVAL-GNLSRLTELQMGGNLFNGSIPRELGSLTGLQIALNL 633
Query: 319 SRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDR 378
S N +TG P +N ++NN L G++ SS SL+ + +Y T
Sbjct: 634 SYNKLTGEIPPELSN-LVMLEFLLLNNNNLSGEIPSSFANLSSLLGYNFSYNSLTGPIPL 692
Query: 379 GRNVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHEEKS-----S 433
RN+S+ F GL QP P S
Sbjct: 693 LRNISMSS-----------------FIGNEGLCGPPLNQCIQTQPFAPSQSTGKPGGMRS 735
Query: 434 KRWIFILVGVFGGLGFIAILVIVLVLILRRCDKGIANQRGSANVGPVPEGHSTP---PPK 490
+ I I V GG+ +L+ ++V ++RR + +A+ SA G P S PPK
Sbjct: 736 SKIIAITAAVIGGVSL--MLIALIVYLMRRPVRTVAS---SAQDGQ-PSEMSLDIYFPPK 789
Query: 491 DPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSL---- 546
+ FT++ L+ AT NF E+ ++ +G G ++K L G T+ VKK++
Sbjct: 790 ---------EGFTFQDLVAATDNFDESFVVGRGACGTVYKAVLPAGYTLAVKKLASNHEG 840
Query: 547 --HSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTD 604
++ S+ E+ + H +V L G C H+ LL+Y+YM G L LH
Sbjct: 841 GNNNNVDNSFRAEILTLGNIRHRNIVKLHGFC-NHQGSNLLLYEYMPKGSLGEILH---- 895
Query: 605 LEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
D +LDW R KIA+GAA+GL+YLHH+C P + HRD+++++ILLDDKFE +G
Sbjct: 896 ---DPSCNLDWSKRFKIALGAAQGLAYLHHDCKPRIFHRDIKSNNILLDDKFEAHVG 949
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 693 | ||||||
| 255538650 | 897 | lrr receptor protein kinase, putative [R | 0.972 | 0.751 | 0.659 | 0.0 | |
| 147818758 | 843 | hypothetical protein VITISV_008690 [Viti | 0.959 | 0.788 | 0.640 | 0.0 | |
| 225458279 | 903 | PREDICTED: probable LRR receptor-like se | 0.959 | 0.736 | 0.640 | 0.0 | |
| 449460094 | 882 | PREDICTED: probable LRR receptor-like se | 0.974 | 0.765 | 0.582 | 0.0 | |
| 449476802 | 882 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.974 | 0.765 | 0.582 | 0.0 | |
| 255536845 | 901 | lrr receptor protein kinase, putative [R | 0.955 | 0.734 | 0.572 | 0.0 | |
| 359475328 | 908 | PREDICTED: probable LRR receptor-like se | 0.966 | 0.737 | 0.578 | 0.0 | |
| 449462274 | 896 | PREDICTED: probable LRR receptor-like se | 0.948 | 0.733 | 0.564 | 0.0 | |
| 356517903 | 898 | PREDICTED: probable LRR receptor-like se | 0.962 | 0.742 | 0.551 | 0.0 | |
| 356509565 | 900 | PREDICTED: probable LRR receptor-like se | 0.971 | 0.747 | 0.543 | 0.0 |
| >gi|255538650|ref|XP_002510390.1| lrr receptor protein kinase, putative [Ricinus communis] gi|223551091|gb|EEF52577.1| lrr receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/678 (65%), Positives = 529/678 (78%), Gaps = 4/678 (0%)
Query: 7 VLLLIRCVLAQQVPLDSAVQRSALLDLRSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIA 66
VLLLIRC LAQQ L+S+ +R ALLDLRSSLGLRS DWP++++PC +W GV C+NG V
Sbjct: 14 VLLLIRCTLAQQAFLNSSTERLALLDLRSSLGLRSTDWPIKSDPCSTWNGVHCKNGHVTG 73
Query: 67 INISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLR 126
INISGFKRT IGR N F+VDSL NLT L SFNAS SLPG IP WFGYRL +LQVLDLR
Sbjct: 74 INISGFKRTHIGRQNRSFSVDSLVNLTFLESFNASSFSLPGPIPSWFGYRLGSLQVLDLR 133
Query: 127 SCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAI 186
S++G IP S GNL+ LN LYLS N L G+VP LG+L KLS LDLSRN LTG+IP +
Sbjct: 134 FSSVAGPIPESIGNLTTLNALYLSDNRLTGSVPYALGQLVKLSVLDLSRNSLTGQIPTSF 193
Query: 187 SLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLS 246
+L NL+RL+L+SN+ +G IP GL ++S++QFL+LSDN+L IP E+GNL +L EL+L+
Sbjct: 194 ALPSNLSRLDLSSNYLSGPIPYGLGNISTLQFLDLSDNSLAASIPVELGNLSRLFELNLT 253
Query: 247 KNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPAT 306
KNS+SGSLP+E GL +L +L I +NGLEG L + +F TLD L+VV LSGN LDGA+P
Sbjct: 254 KNSLSGSLPVEFIGLTSLQRLEIGDNGLEGVLPD-IFTTLDNLRVVVLSGNNLDGAIPGA 312
Query: 307 LFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLS 366
L PNL+ LDLS NN TG S+NGNA GA+FN+SNN+LYG L S FR FSL+DLS
Sbjct: 313 LLSLPNLQVLDLSGNNFTGILSNFSSNGNAGGALFNLSNNLLYGSL-VSPFRNFSLVDLS 371
Query: 367 SNYFQGTVADDRGRNVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVP 426
NY QG V D N+SL RNCLQ+V +QRS E+C+LFY ERGL FDNFG E QPP P
Sbjct: 372 GNYIQGKVPDGSQSNISLDRNCLQAVLNQRSLEECKLFYDERGLNFDNFGAPESTQPPSP 431
Query: 427 QHEEKSSKRWIFILVGVFGGLGFIAILVIVLVLILRRCDKGIANQRGSANVGPVPEGHST 486
+ K KRWI+IL+G+ G+ FI ILV+++V++LR+CDK I NQRGSANVGPVPEG
Sbjct: 432 EPAPKKRKRWIYILMGLLVGVAFIVILVLMMVVVLRKCDKRITNQRGSANVGPVPEGDIP 491
Query: 487 PPPKDPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSL 546
PKDPA +S + DSFTYEQLL +T FSE NLI+ GHSGDLF+G L GG ++VKKV
Sbjct: 492 SLPKDPANISSLRDSFTYEQLLSSTRAFSEANLIRHGHSGDLFQGLLDGGCPIIVKKVDF 551
Query: 547 HSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLE 606
S KKESYM EL+LFS+ SH RLVP LG C E+E EKLLVYKYM GDLASSL+RV+DLE
Sbjct: 552 RS-KKESYMTELELFSKYSHTRLVPFLGHCSENENEKLLVYKYMPNGDLASSLYRVSDLE 610
Query: 607 DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666
DDSLQSLDWITRLKIAIGAAEGL+YLHHECNPPLVHRD+QASSILLDDKFEVR+GSLSE+
Sbjct: 611 DDSLQSLDWITRLKIAIGAAEGLAYLHHECNPPLVHRDIQASSILLDDKFEVRIGSLSEV 670
Query: 667 HAQ-GDSHQNVLTRFLWR 683
Q GDSH NVLTRFL +
Sbjct: 671 RIQEGDSHHNVLTRFLRK 688
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147818758|emb|CAN71800.1| hypothetical protein VITISV_008690 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/667 (64%), Positives = 518/667 (77%), Gaps = 2/667 (0%)
Query: 16 AQQVPLDSAVQRSALLDLRSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRT 75
AQ PL + +RSAL DLRSSLGLR++DWP R+EPC +W GV CQNG+V+ I++SG +RT
Sbjct: 27 AQNNPLRNDTERSALFDLRSSLGLRAKDWPRRSEPCWNWTGVACQNGRVVGISVSGLQRT 86
Query: 76 RIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP 135
GR+NP+FAVDSL NL+LL++FN+SG LPGSIP+W G L ALQVLDLRS S+ G IP
Sbjct: 87 HAGRVNPQFAVDSLANLSLLATFNSSGFELPGSIPDWLGQSLSALQVLDLRSASVKGPIP 146
Query: 136 GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195
S G+L L+ LYLSGNSL G +P+ LG+L LS L+LS+N LTG IP S L NLT L
Sbjct: 147 QSLGSLGSLHSLYLSGNSLTGAIPSQLGQLSALSVLNLSQNSLTGSIPQTFSTLSNLTSL 206
Query: 196 NLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255
+L+SN+ +G +PSGL +L+ +QFLNLS N LT IP+++G L +L+ELDLS N++ G++P
Sbjct: 207 DLSSNYLSGSVPSGLANLTKLQFLNLSSNILTASIPNQLGQLFQLVELDLSLNNLMGTVP 266
Query: 256 LELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRF 315
++L GLR+L K+++ NGL+G LS+ LF L +LQ + LS NK++G +P L+ LRF
Sbjct: 267 VDLGGLRSLQKMLLGNNGLQGSLSDKLFSNLTRLQFLVLSDNKIEGDIPGVLWSMHELRF 326
Query: 316 LDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVA 375
LD+S NN TG LS N N++ +FN+SNN+ YG L + KFSLIDLS NYFQG V
Sbjct: 327 LDVSGNNFTGVLANLSWNVNSTNTMFNLSNNLFYGAL-PTPLGKFSLIDLSGNYFQGKVP 385
Query: 376 DDRGRNVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHEEKSSKR 435
+D N SL RNCLQSV QRS EDCRLFYAER L+FDNFG P QPP+P SSKR
Sbjct: 386 NDIETNTSLNRNCLQSVLDQRSLEDCRLFYAERNLSFDNFGAPSPAQPPLPGSSTNSSKR 445
Query: 436 WIFILVGVFGGLGFIAILVIVLVLILRRCDKGIANQRGSANVGPVPEGHSTPPPKDPAIV 495
WIFILVG+FGGLGFI +LV+VLVL++RRCDK IA+QR ANVGP PEG S P K
Sbjct: 446 WIFILVGLFGGLGFIVLLVLVLVLLIRRCDKRIASQREIANVGPAPEGRSPLPAKVSINF 505
Query: 496 SGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYM 555
SGVGD FTYEQ+L T FSE NLIK GHSGDLF+G L G VVVK+V L + KKESYM
Sbjct: 506 SGVGDLFTYEQILCYTDGFSEINLIKHGHSGDLFRGILESGAPVVVKRVDLRALKKESYM 565
Query: 556 MELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDW 615
MELD+ ++VSH RLVPLLG CLEH++EKLLVYKYM GDL++SL+RVT+LEDD+LQSLDW
Sbjct: 566 MELDVLNKVSHMRLVPLLGHCLEHDSEKLLVYKYMPNGDLSNSLYRVTNLEDDNLQSLDW 625
Query: 616 ITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ-GDSHQ 674
ITRLKIAIGAAEGLSYLHHEC+PPLVHRDVQASSILLDDKFEVRLGSLSE+ AQ GDSHQ
Sbjct: 626 ITRLKIAIGAAEGLSYLHHECSPPLVHRDVQASSILLDDKFEVRLGSLSEVCAQEGDSHQ 685
Query: 675 NVLTRFL 681
NV+T+ L
Sbjct: 686 NVITKLL 692
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458279|ref|XP_002281409.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/667 (64%), Positives = 518/667 (77%), Gaps = 2/667 (0%)
Query: 16 AQQVPLDSAVQRSALLDLRSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRT 75
AQ PL + +RSAL DLRSSLGLR++DWP R+EPC +W GV CQNG+V+ I++SG +RT
Sbjct: 27 AQNNPLRNDTERSALFDLRSSLGLRAKDWPRRSEPCWNWTGVACQNGRVVGISVSGLQRT 86
Query: 76 RIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP 135
GR+NP+FAVDSL NL+LL++FN+SG LPGSIP+W G L ALQVLDLRS S+ G IP
Sbjct: 87 HAGRVNPQFAVDSLANLSLLATFNSSGFELPGSIPDWLGQSLSALQVLDLRSASVKGPIP 146
Query: 136 GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195
S G+L L+ LYLSGNSL G +P+ LG+L LS L+LS+N LTG IP S L NLT L
Sbjct: 147 QSLGSLGSLHSLYLSGNSLTGAIPSQLGQLSALSVLNLSQNSLTGSIPQTFSTLSNLTSL 206
Query: 196 NLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255
+L+SN+ +G +PSGL +L+ +QFLNLS N LT IP+++G L +L+ELDLS N++ G++P
Sbjct: 207 DLSSNYLSGSVPSGLANLTKLQFLNLSSNILTASIPNQLGQLFQLVELDLSLNNLMGTVP 266
Query: 256 LELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRF 315
++L GLR+L K+++ NGL+G LS+ LF L +LQ + LS NK++G +P L+ LRF
Sbjct: 267 VDLGGLRSLQKMLLGNNGLQGSLSDKLFSNLTRLQFLVLSDNKIEGDIPGVLWSMHELRF 326
Query: 316 LDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVA 375
LD+S NN TG LS N N++ +FN+SNN+ YG L + KFSLIDLS NYFQG V
Sbjct: 327 LDVSGNNFTGVLANLSWNVNSTNTMFNLSNNLFYGAL-PTPLGKFSLIDLSGNYFQGKVP 385
Query: 376 DDRGRNVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHEEKSSKR 435
+D N SL RNCLQSV QRS EDCRLFYAER L+FDNFG P QPP+P SSKR
Sbjct: 386 NDIETNTSLNRNCLQSVLDQRSLEDCRLFYAERNLSFDNFGAPSPAQPPLPGSSTNSSKR 445
Query: 436 WIFILVGVFGGLGFIAILVIVLVLILRRCDKGIANQRGSANVGPVPEGHSTPPPKDPAIV 495
WIFILVG+FGGLGFI +LV+VLVL++RRCDK IA+QR ANVGP PEG S P K
Sbjct: 446 WIFILVGLFGGLGFIVLLVLVLVLLIRRCDKRIASQREIANVGPAPEGRSPLPAKVSINF 505
Query: 496 SGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYM 555
SGVGD FTYEQ+L T FSE NLIK GHSGDLF+G L G VVVK+V L + KKESYM
Sbjct: 506 SGVGDLFTYEQILCYTDGFSEINLIKHGHSGDLFRGILESGAPVVVKRVDLRALKKESYM 565
Query: 556 MELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDW 615
MELD+ ++VSH RLVPLLG CLEH++EKLLVYKYM GDL++SL+RVT+LEDD+LQSLDW
Sbjct: 566 MELDVLNKVSHMRLVPLLGHCLEHDSEKLLVYKYMPNGDLSNSLYRVTNLEDDNLQSLDW 625
Query: 616 ITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ-GDSHQ 674
ITRLKIAIGAAEGLSYLHHEC+PPLVHRDVQASSILLDDKFEVRLGSLSE+ AQ GDSHQ
Sbjct: 626 ITRLKIAIGAAEGLSYLHHECSPPLVHRDVQASSILLDDKFEVRLGSLSEVCAQEGDSHQ 685
Query: 675 NVLTRFL 681
NV+T+ L
Sbjct: 686 NVITKLL 692
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449460094|ref|XP_004147781.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/685 (58%), Positives = 488/685 (71%), Gaps = 10/685 (1%)
Query: 11 IRCVLAQQVPLDSAVQRSALLDLRSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIAINIS 70
I+ L Q+ L+S+ + +ALL LRSSLGLRSRDWP++ PC W GV+C+ G+V+ I +S
Sbjct: 19 IQFGLGQKEWLNSSTEWTALLYLRSSLGLRSRDWPIKANPCSDWSGVKCKGGRVVGITVS 78
Query: 71 GFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSL 130
G +RTRIG+++PRFAVD+L N T L FNASG LPGSIP+WFG L LQVLDLRS S+
Sbjct: 79 GLRRTRIGQVSPRFAVDALANFTSLVLFNASGFLLPGSIPDWFGQSLVELQVLDLRSSSI 138
Query: 131 SGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLG 190
GSIP S GNLS+L LYLSGNSL G +P+ LG L +LS LD+SRNLLTG IP +S L
Sbjct: 139 VGSIPSSIGNLSKLTDLYLSGNSLTGIMPSALGLLSQLSVLDVSRNLLTGSIPPFLSSLN 198
Query: 191 NLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250
NL RL LASNF +G IP + +L +Q L+LSDN+LT +PSE+GNL +L+ LDL KNS+
Sbjct: 199 NLRRLELASNFLSGPIPPSISTLKKLQLLDLSDNSLTSSVPSELGNLSELLVLDLGKNSL 258
Query: 251 SGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310
+G+LP++LRGLRNL K+ I +NGLEG L LF +L QL+++ L GN+LDG L L
Sbjct: 259 TGALPVDLRGLRNLEKMNIGDNGLEGPLPVDLFRSLAQLEILVLRGNRLDGRLNHDLLSH 318
Query: 311 PNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYF 370
P L+FLD+S NN TG P N S VFN SNN+LYG LN IDLS NYF
Sbjct: 319 PKLKFLDVSNNNFTGFLPSFVPN---SVVVFNFSNNVLYGHLN-LPLELHGSIDLSGNYF 374
Query: 371 QGTVADDRGRNVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHEE 430
QG V ++ + L NCL QR+ E C LFY+ER LTF+ F + P +
Sbjct: 375 QGVVV-NKSPDAILSGNCLDMEPDQRNFEACSLFYSERTLTFEGF---KNGNPDEMKRGH 430
Query: 431 KSSKRWIFILVGVFGGLGFIAILVIVLVLILRRCDKGIANQRGSANVGPVPEGHSTPPPK 490
+ R FI+VG+FGGLGF+ I V++LV++L+ C KG AN++G ANVGPVP+G S PK
Sbjct: 431 VRNSRLKFIMVGLFGGLGFVVIFVLILVVLLKFCGKGEANKKGKANVGPVPDGDSPSFPK 490
Query: 491 DPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK 550
DP +G+GDSFTYEQ+L +TGNFSE NLIK GHSGDL+KG L GG VVVKKV++ K
Sbjct: 491 DPIYFAGLGDSFTYEQMLHSTGNFSEHNLIKHGHSGDLYKGFLEGGLPVVVKKVNMQYLK 550
Query: 551 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSL 610
E Y +ELD FS+VSH RLVP LG C E E EKLLVYK M GDLA+ LH ++ EDD++
Sbjct: 551 NEMYSLELDFFSKVSHMRLVPFLGHCFEREDEKLLVYKCMPNGDLANCLHNISCSEDDNV 610
Query: 611 QSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA-Q 669
QSLDWI RLKIAIGAAE LSYLHHECNPP+VHRDVQASSILLDDKFEVRLGSLSE
Sbjct: 611 QSLDWIIRLKIAIGAAEVLSYLHHECNPPVVHRDVQASSILLDDKFEVRLGSLSEACVLD 670
Query: 670 GDSHQNVLTRFLWR-QLYQSCMNGP 693
GD HQNV TR + Q + C +GP
Sbjct: 671 GDQHQNVFTRLRRKPQSSEQCSSGP 695
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449476802|ref|XP_004154838.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/685 (58%), Positives = 487/685 (71%), Gaps = 10/685 (1%)
Query: 11 IRCVLAQQVPLDSAVQRSALLDLRSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIAINIS 70
I+ L Q+ L+S+ + +ALL LRSSLGLRSRDWP++ PC W GV+C+ G+V+ I +S
Sbjct: 19 IQFGLGQKEWLNSSTEWTALLYLRSSLGLRSRDWPIKANPCSDWSGVKCKGGRVVGITVS 78
Query: 71 GFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSL 130
G +RTRIG+++PRFAVD+L N T L FNASG LPGSIP+WFG L LQVLDLRS S+
Sbjct: 79 GLRRTRIGQVSPRFAVDALANFTSLVLFNASGFLLPGSIPDWFGQSLVELQVLDLRSSSI 138
Query: 131 SGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLG 190
GSIP S GNLS+L LYLSGNSL G +P+ LG L +LS LD+SRNLLTG IP +S L
Sbjct: 139 VGSIPSSIGNLSKLTDLYLSGNSLTGIMPSALGLLSQLSVLDVSRNLLTGSIPPFLSSLN 198
Query: 191 NLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250
NL RL LASNF +G IP + +L +Q L+LSDN+LT +PSE+GNL +L+ LDL KNS+
Sbjct: 199 NLRRLELASNFLSGPIPPSISTLKKLQLLDLSDNSLTSSVPSELGNLSELLVLDLGKNSL 258
Query: 251 SGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310
+G+LP++LRGLRNL K+ I +NGLEG L LF +L QL+++ L GN+LDG L L
Sbjct: 259 TGALPVDLRGLRNLEKMNIGDNGLEGPLPVDLFRSLAQLEILVLRGNRLDGRLNHDLLSH 318
Query: 311 PNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYF 370
P L+FLD+S NN TG P N S VFN SNN+LYG LN IDLS NYF
Sbjct: 319 PKLKFLDVSNNNFTGFLPSFVPN---SVVVFNFSNNVLYGHLN-LPLELHGSIDLSGNYF 374
Query: 371 QGTVADDRGRNVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHEE 430
QG V ++ + L NCL QR+ E C LFY+ER LTF+ F + P +
Sbjct: 375 QGVVV-NKSPDAILSGNCLDMEPDQRNFEACSLFYSERTLTFEGF---KNGNPDEMKRGH 430
Query: 431 KSSKRWIFILVGVFGGLGFIAILVIVLVLILRRCDKGIANQRGSANVGPVPEGHSTPPPK 490
+ R FI+VG+FGGLGF+ I V++LV++L+ C KG AN +G ANVGPVP+G S PK
Sbjct: 431 VRNSRLKFIMVGLFGGLGFVVIFVLILVVLLKFCGKGEANXKGKANVGPVPDGDSPSFPK 490
Query: 491 DPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK 550
DP +G+GDSFTYEQ+L +TGNFSE NLIK GHSGDL+KG L GG VVVKKV++ K
Sbjct: 491 DPIYFAGLGDSFTYEQMLHSTGNFSEHNLIKHGHSGDLYKGFLEGGLPVVVKKVNMQYLK 550
Query: 551 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSL 610
E Y +ELD FS+VSH RLVP LG C E E EKLLVYK M GDLA+ LH ++ EDD++
Sbjct: 551 NEMYSLELDFFSKVSHMRLVPFLGHCFEREDEKLLVYKCMPNGDLANCLHNISCSEDDNV 610
Query: 611 QSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA-Q 669
QSLDWI RLKIAIGAAE LSYLHHECNPP+VHRDVQASSILLDDKFEVRLGSLSE
Sbjct: 611 QSLDWIIRLKIAIGAAEVLSYLHHECNPPVVHRDVQASSILLDDKFEVRLGSLSEACVLD 670
Query: 670 GDSHQNVLTRFLWR-QLYQSCMNGP 693
GD HQNV TR + Q + C +GP
Sbjct: 671 GDQHQNVFTRLRRKPQSSEQCSSGP 695
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255536845|ref|XP_002509489.1| lrr receptor protein kinase, putative [Ricinus communis] gi|223549388|gb|EEF50876.1| lrr receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/667 (57%), Positives = 484/667 (72%), Gaps = 5/667 (0%)
Query: 17 QQVP-LDSAVQRSALLDLRSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRT 75
QQV L+S V+R+ALL LRSSLG+RS++WP +T PC +W G+ C NG V INISGF+RT
Sbjct: 24 QQVETLNSPVERAALLQLRSSLGIRSKEWPRKTNPCSNWTGISCTNGSVSGINISGFRRT 83
Query: 76 RIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP 135
R+G NP+F VD+L NLT L SFNAS LPGSIP+WFG L +LQ LDL C + +IP
Sbjct: 84 RLGSQNPQFVVDALVNLTHLISFNASRFQLPGSIPDWFGQSLGSLQALDLSFCDIRNAIP 143
Query: 136 GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195
S GNL+ L LYLSGN L G++P++LG+L LS L+LS+N LT IP + L NLT L
Sbjct: 144 ASLGNLTNLTSLYLSGNRLVGSIPSSLGQLVLLSILNLSQNSLTVSIPVSFGFLANLTIL 203
Query: 196 NLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255
+++SNF +G IP G+ L +Q+LNLS+N L+ IP+++G+L +L++LDLS NS+SGS+P
Sbjct: 204 DISSNFLSGSIPPGIGMLLKLQYLNLSNNQLSSPIPAQLGDLVQLVDLDLSFNSLSGSVP 263
Query: 256 LELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRF 315
ELRGLRNL +++I N L G L LF QLQ+V + N G++P L+ P L F
Sbjct: 264 AELRGLRNLKRMLIGNNMLVGSLPVNLFSASIQLQIVVMKNNGFTGSVPNVLWTMPGLSF 323
Query: 316 LDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVA 375
LD+S NN TG P ++ N N S A NIS N+LYG LN R+FS +DLS NYF+G V
Sbjct: 324 LDISGNNFTGLLPNVTFNANTSTAELNISGNLLYGFLN-PILRRFSFVDLSGNYFEGKVL 382
Query: 376 DDRGRNVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHEEKSSKR 435
D N SL NCLQ+V++QRS +C FYAERGL FDNFG+ QPP + E KS+ R
Sbjct: 383 DLVPDNASLLSNCLQNVSNQRSLSECTSFYAERGLIFDNFGLPNSTQPPAGESEGKSN-R 441
Query: 436 WIFILVGVFGGLGFIAILVIVLVLILRRCDKGIANQRGSANVGPVPEGHSTPPPKDPAIV 495
+ IL V GG+G + +L+I+++L + C +G ANQRG+ VGPVP G S PPP+ +
Sbjct: 442 MVIILASVLGGVGLVVLLIILVLLFVCHCKRGTANQRGTG-VGPVPAGSSPPPPEAAIDL 500
Query: 496 SGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYM 555
S +GD+FTY+QLL+AT +FS+ NLIK GHSGDL++G L G +VV+K+V L S KKESY+
Sbjct: 501 SSLGDTFTYQQLLQATSDFSDENLIKHGHSGDLYRGVLENGISVVIKRVHLQSIKKESYV 560
Query: 556 MELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDW 615
MELD+FS+VSH RLVP LG CL +E EK LVYKYM DL+SSL+R T +DDSLQSLDW
Sbjct: 561 MELDIFSKVSHPRLVPFLGHCLANENEKFLVYKYMPNRDLSSSLYRKTSSDDDSLQSLDW 620
Query: 616 ITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ-GDSHQ 674
ITRLKIA GAAE LS LHHEC PP+VHRDVQASSILLDDKFEVRLGSLSE+ Q GD+HQ
Sbjct: 621 ITRLKIATGAAEALSCLHHECTPPIVHRDVQASSILLDDKFEVRLGSLSEVCPQEGDAHQ 680
Query: 675 NVLTRFL 681
+ +TR L
Sbjct: 681 SRITRLL 687
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475328|ref|XP_003631657.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/678 (57%), Positives = 500/678 (73%), Gaps = 8/678 (1%)
Query: 18 QVPLDSAVQRSALLDLRSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRI 77
Q L S+ + +ALL+LRSSLGLRS++WP++++PC WRGVQC+NG V+ I+ISGF+RTR+
Sbjct: 30 QARLSSSAEFTALLELRSSLGLRSKEWPIKSDPCWFWRGVQCRNGSVVGIDISGFRRTRL 89
Query: 78 GRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGS 137
G NP FAVD+L NLTLL SFNAS LPGSIP+WFG RL +L+VLDLRSCS+ G IP S
Sbjct: 90 GSRNPEFAVDALANLTLLESFNASMFLLPGSIPDWFGERLSSLKVLDLRSCSIIGPIPSS 149
Query: 138 FGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197
GNLS LN L+LS N+L G +P++LG+L LS LDLS+N TG IP++ NL+ LN+
Sbjct: 150 LGNLSNLNALFLSYNNLTGIIPSSLGQLSHLSVLDLSQNRFTGSIPSSFGSFRNLSVLNI 209
Query: 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLE 257
+ NF + IP G+ ++SS+Q+LNLS N+L+ IP+++G+LD L+ELDLS NS+SGSLP +
Sbjct: 210 SVNFLSDTIPPGIGNISSLQYLNLSGNSLSSSIPAQLGDLDNLVELDLSFNSLSGSLPAD 269
Query: 258 LRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLD 317
RGL+NL K+ I +N L G L LFP L QLQ+V LS N G LP L+ PNL FLD
Sbjct: 270 FRGLKNLQKMAIRKNSLAGSLPGNLFPALSQLQLVVLSQNAFTGNLPDVLWTMPNLSFLD 329
Query: 318 LSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADD 377
+S NN T P S NGNA+ +VFN+S NM YG L S R+FS ID+S NYF+G V D
Sbjct: 330 VSGNNFTSVLPNFSFNGNATASVFNLSQNMFYGGLPSLP-RRFSSIDMSQNYFEGRVRDY 388
Query: 378 RGRNVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHEEKSSKRWI 437
N S G NCLQ+V++QR+ E C FYAE+GL FDNFG QP KS+K+WI
Sbjct: 389 APSNASFGMNCLQNVSNQRTLEVCASFYAEKGLPFDNFGQPNSTQPTTNDTSGKSNKKWI 448
Query: 438 FILVGVFGGLGFIAILVIVLVLILRRC-DKGIANQRGSANVGPVPEGHSTPPPKDPAIVS 496
+ + G + +++++++ + C KG +QRG+ VGPVP G S PPP P S
Sbjct: 449 ILAGVLGGLGLILFLVLVLVLFLC--CWRKGGTSQRGNG-VGPVPAGGSPPPPGMPINFS 505
Query: 497 GVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMM 556
+G++FTY+Q+L+ATG+FS+ N IK GHSGDL+ G L GG +V+K++ L S KKE+Y++
Sbjct: 506 SLGEAFTYQQILQATGDFSDANFIKHGHSGDLYWGILEGGVRIVIKRIDLSSIKKETYLL 565
Query: 557 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWI 616
ELD FS+VSH R VPLLGQCLE++ EK LVYKYM GDL++SL R T+LEDD LQSLDWI
Sbjct: 566 ELDFFSKVSHTRFVPLLGQCLENDNEKFLVYKYMPNGDLSNSLFRKTNLEDDGLQSLDWI 625
Query: 617 TRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ-GDSHQN 675
TRLKIAIGAAE LS+LHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE+ +Q GD+HQN
Sbjct: 626 TRLKIAIGAAEALSHLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEVCSQEGDTHQN 685
Query: 676 VLTRFLWRQLYQSCMNGP 693
V+TRFL +L Q+ GP
Sbjct: 686 VITRFL--RLPQTSEQGP 701
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449462274|ref|XP_004148866.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Cucumis sativus] gi|449507355|ref|XP_004163008.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/663 (56%), Positives = 482/663 (72%), Gaps = 6/663 (0%)
Query: 21 LDSAVQRSALLDLRSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGRL 80
L S +R ALL+LRSSLGLRS+DWP++ +PC WRG++CQNG+V+ IN+SGF+RTR+G L
Sbjct: 25 LSSRAERVALLNLRSSLGLRSKDWPIKADPCSVWRGIECQNGRVVGINVSGFRRTRLGSL 84
Query: 81 NPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGN 140
+P+F VD+L NLTLL SFNAS LPG IP+W G L +LQVLDLRSCS+ GSIP SFGN
Sbjct: 85 HPQFVVDALANLTLLQSFNASNFLLPGVIPDWVGSTLKSLQVLDLRSCSILGSIPLSFGN 144
Query: 141 LSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200
L+ L LYLS N L G +P ++G+L +LS LDLS N LTG IP + S L NL+ L+L+SN
Sbjct: 145 LTNLTALYLSNNKLNGTIPTSIGQLVQLSVLDLSHNELTGSIPLSFSSLANLSFLDLSSN 204
Query: 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRG 260
G IP + S+ +Q LNLS N +T +P+ +G+L +L++LDLS N SG LP +LR
Sbjct: 205 GLDGSIPPLIGSIRQLQSLNLSSNNITSSLPASLGDLSRLVDLDLSFNKFSGLLPTDLRS 264
Query: 261 LRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSR 320
+ +L ++VI N L G L E LFP+L QLQ + L+ N GA+P LFL P LR LD+S
Sbjct: 265 MSSLQRMVIGNNLLGGSLPEDLFPSLRQLQELTLNDNGFTGAVPDVLFLIPGLRLLDISG 324
Query: 321 NNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRGR 380
NN TG P S N++G NIS NM YG L +FS +DLS NYF+G + + R
Sbjct: 325 NNFTGMLPNSSLASNSTGGALNISRNMFYGSL-MPVIGRFSAVDLSGNYFEGRIPNFVPR 383
Query: 381 NVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHEEKSSKRWIFIL 440
+ SL NCLQ+V+SQR+ DC FYAE+GL+FDNFG +QPP+ + K++KR IL
Sbjct: 384 DASLESNCLQNVSSQRTLADCSSFYAEKGLSFDNFGKPNSVQPPLAEKSSKNNKR--VIL 441
Query: 441 VGVFGGLGFIAILVIVLVLILRRCDK-GIANQRGSANVGPVPEGHSTPPPKDPAIVSGVG 499
V GG+GFI ++++V++L L K NQRG +VGP+P G S PP + +G
Sbjct: 442 GSVIGGVGFIVLVLLVVLLFLYIGGKRASGNQRG-VSVGPIPTGSSEPPSGLSINFASLG 500
Query: 500 DSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELD 559
+SFT +QLL+A+G S+ NLIK GHSGDLF+G L G VV+KK+ L + KKE+Y++ELD
Sbjct: 501 ESFTDKQLLQASGGLSDENLIKLGHSGDLFRGVLDNGANVVIKKIDLRTVKKETYLVELD 560
Query: 560 LFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRL 619
LFS+VSH RLVP LG CL++E EK LVYK+M GDLASSL R T+++D+++QSLDWITRL
Sbjct: 561 LFSKVSHTRLVPFLGHCLDNEHEKYLVYKHMPNGDLASSLVRKTNVDDENIQSLDWITRL 620
Query: 620 KIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ-GDSHQNVLT 678
KIA+GAAEGL+Y+HHEC+PPLVHRDVQASSILLDDKFEVRLGSLSE+ AQ GDSHQN ++
Sbjct: 621 KIALGAAEGLAYMHHECSPPLVHRDVQASSILLDDKFEVRLGSLSEVCAQDGDSHQNRIS 680
Query: 679 RFL 681
R L
Sbjct: 681 RLL 683
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356517903|ref|XP_003527625.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/680 (55%), Positives = 479/680 (70%), Gaps = 13/680 (1%)
Query: 17 QQVPLDSAVQRSALLDLRSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTR 76
Q PL S +R +LL+LR SLGLRS++WP + +PC W G+ CQNG+V+ INISGF+RTR
Sbjct: 20 QNEPLSSVEERESLLELRGSLGLRSKEWPRKPDPCLIWVGITCQNGRVVGINISGFRRTR 79
Query: 77 IGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPG 136
+GR NP+FAVD+L N TLL SFNAS LPGSIP+WFG LP+L VLDLRSCS+ +IP
Sbjct: 80 LGRRNPQFAVDALANFTLLRSFNASNFPLPGSIPDWFGLSLPSLTVLDLRSCSIVDAIPS 139
Query: 137 SFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196
+ GNL+ L LYLS N+L GNVP TLG+L LS LDLSRN LTG IP + + LGNL+ L+
Sbjct: 140 TLGNLTNLTSLYLSDNNLIGNVPGTLGQLLALSVLDLSRNSLTGSIPASFAFLGNLSSLD 199
Query: 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNS-ISGSLP 255
+++NF +G IP+G+ +LS +Q+LNLS+N L+ +P+E+G L L++LDLS+NS + G LP
Sbjct: 200 MSANFLSGAIPTGIGTLSRLQYLNLSNNGLSS-LPAELGGLASLVDLDLSENSFVGGGLP 258
Query: 256 LELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRF 315
+ LRNL +++++ + L G L LF D LQ + L N G+LP L+ P L F
Sbjct: 259 PDFTRLRNLRRMILANSMLTGALPGRLFS--DSLQFLVLRQNNFSGSLPVELWSLPRLSF 316
Query: 316 LDLSRNNITGSWPILSTNGNASGA-VFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTV 374
LD+S NN +G P ++ N + A V NIS+N YG L + + R+F +DLS NYF+G +
Sbjct: 317 LDVSANNFSGLLPNSTSAANNATAAVLNISHNKFYGGL-TPALRRFGFVDLSRNYFEGKI 375
Query: 375 ADDRGRNVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHEEKSSK 434
D NVSL NCLQ +QRS+ +C FYAERGL+FDNFG +PP + KS+K
Sbjct: 376 LDYM-LNVSLDINCLQKATNQRSTMECASFYAERGLSFDNFGQPNTTKPPTAESSGKSNK 434
Query: 435 RWIFILVGVFGGLGFIAILVIVLVLILRRCDK-GIANQRGSANVGPVPEGHSTPPPKDPA 493
I IL VFGG+G IA+LV++LVL+L K G +NQRG+ VGP P G S P P
Sbjct: 435 TKI-ILAAVFGGVGLIALLVLLLVLLLLCARKRGNSNQRGNG-VGPAPVGSSPPNPGVLV 492
Query: 494 IVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKES 553
VGDSFTY QLL+ATG+F++ NLIK GH+GD F G L G VV+K++ + S KKE+
Sbjct: 493 DFPNVGDSFTYHQLLQATGDFNDANLIKHGHTGDFFNGVLESGIPVVIKRIDMRSTKKEA 552
Query: 554 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSL 613
Y+ ELD F++VSH R VPLLG CLE+E EK LVYK M GDL++ L+ ED +LQSL
Sbjct: 553 YLSELDFFNKVSHQRFVPLLGHCLENENEKFLVYKRMTNGDLSNCLYYKNTSEDGTLQSL 612
Query: 614 DWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ-GDS 672
DWITRLKIA GAAE LSYLHHEC PP+VHRD+QASSILLDDK+EVRLGSLSE AQ GD
Sbjct: 613 DWITRLKIATGAAEALSYLHHECVPPIVHRDIQASSILLDDKYEVRLGSLSESCAQEGDI 672
Query: 673 HQNVLTRFLWRQLYQSCMNG 692
HQ+ +TRFL +L QS G
Sbjct: 673 HQSKITRFL--RLPQSSEQG 690
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356509565|ref|XP_003523518.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/685 (54%), Positives = 476/685 (69%), Gaps = 12/685 (1%)
Query: 12 RCVLAQQVPLDSAVQRSALLDLRSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIAINISG 71
+ L Q PL SA +R +LL+LR+SLGLRS++WP + +PC W G+ CQNG+V+ INISG
Sbjct: 15 QVTLEQIEPLSSAEERESLLELRASLGLRSKEWPRKPDPCLIWVGITCQNGRVVGINISG 74
Query: 72 FKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLS 131
F+RTRIGR NP+FAVD+L N TLL +FNAS L G IP+WFG LP+L+VLDLR CS+
Sbjct: 75 FRRTRIGRRNPQFAVDALANFTLLQTFNASNFVLSGPIPDWFGLSLPSLRVLDLRFCSIV 134
Query: 132 GSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGN 191
+IP + GNL+ L LYLS N+L GNVP TLG+L LS LDLSRN LTG +P + + L N
Sbjct: 135 DAIPSTLGNLTNLTGLYLSDNNLIGNVPGTLGQLLALSVLDLSRNSLTGSVPASFAFLSN 194
Query: 192 LTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSIS 251
L+ L+L++NF +G +P+G+ +LS +Q+LNLS+N L +P+++G L L++LDLS+NS
Sbjct: 195 LSSLDLSANFLSGAVPTGIGTLSRLQYLNLSNNGLAS-LPAQLGGLASLVDLDLSENSFV 253
Query: 252 G-SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310
G LPL+L GLRNL +++++ + L G L LF D LQ + L N G+LP L+
Sbjct: 254 GVGLPLDLTGLRNLRRMILANSMLSGVLPGRLFS--DSLQFLVLRQNNFSGSLPVELWSL 311
Query: 311 PNLRFLDLSRNNITGSWPILSTNGN-ASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNY 369
P L FLD+S NN +G P S+ N A+ AV NIS+N YG L + + R+F+ +DLSSNY
Sbjct: 312 PRLSFLDVSANNFSGLLPNSSSAANNATVAVLNISHNKFYGGL-TPALRRFAFVDLSSNY 370
Query: 370 FQGTVADDRGRNVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHE 429
F+G V D RNVSL NCLQ+ +QRS+ C FYAERGL+FDNFG +PP
Sbjct: 371 FEGKVLDFM-RNVSLDINCLQNATNQRSTVKCASFYAERGLSFDNFGRPNTTKPPAAAKS 429
Query: 430 EKSSKRWIFILVGVFGGLGFIAILVIVLVLILRRCDK-GIANQRGSANVGPVPEGHSTPP 488
S + IL V GG+G IAILV +LVL+L K G +NQRG+ VGP P G S P
Sbjct: 430 SGKSNKTKIILAAVLGGVGLIAILVFLLVLLLLCARKRGNSNQRGNG-VGPAPVGSSPPN 488
Query: 489 PKDPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHS 548
P P VGDSFTY QLL+ATG+F++ NLIK GH+GD F G L G +V+K++ S
Sbjct: 489 PGVPIDFPNVGDSFTYHQLLQATGDFNDANLIKHGHTGDFFNGVLESGIPIVIKRIDTRS 548
Query: 549 FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDD 608
KKE+Y+ ELD F++VSH R VPLLG C E+E EK LVYK GDL++ L+ ED
Sbjct: 549 AKKEAYLSELDFFNKVSHQRFVPLLGHCFENENEKFLVYKRTPNGDLSNCLYYKNTSEDG 608
Query: 609 SLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668
+ QSLDWITRLKIA GAAE LSYLHHEC PP+VHRD+QASSILLDDK+EVRLGSLSE+ A
Sbjct: 609 TSQSLDWITRLKIATGAAEALSYLHHECVPPIVHRDIQASSILLDDKYEVRLGSLSEVCA 668
Query: 669 Q-GDSHQNVLTRFLWRQLYQSCMNG 692
Q D HQ+ +TRFL +L QS G
Sbjct: 669 QEADIHQSKITRFL--RLPQSSEQG 691
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 693 | ||||||
| TAIR|locus:2042599 | 915 | AT2G16250 [Arabidopsis thalian | 0.917 | 0.695 | 0.511 | 1.9e-161 | |
| TAIR|locus:2136313 | 864 | AT4G39270 [Arabidopsis thalian | 0.787 | 0.631 | 0.459 | 2e-118 | |
| TAIR|locus:2120362 | 1249 | GSO1 "GASSHO1" [Arabidopsis th | 0.380 | 0.211 | 0.4 | 4.8e-64 | |
| TAIR|locus:2005507 | 976 | ER "ERECTA" [Arabidopsis thali | 0.415 | 0.295 | 0.374 | 3.3e-62 | |
| TAIR|locus:2085949 | 1141 | AT3G24240 [Arabidopsis thalian | 0.441 | 0.268 | 0.362 | 8.4e-62 | |
| TAIR|locus:2092810 | 1164 | BRL3 "BRI1-like 3" [Arabidopsi | 0.464 | 0.276 | 0.307 | 2.8e-60 | |
| TAIR|locus:2182855 | 967 | ERL2 "ERECTA-like 2" [Arabidop | 0.463 | 0.331 | 0.346 | 7.4e-60 | |
| TAIR|locus:2156349 | 1252 | GSO2 "GASSHO 2" [Arabidopsis t | 0.417 | 0.230 | 0.378 | 1.1e-59 | |
| TAIR|locus:2167948 | 966 | ERL1 "ERECTA-like 1" [Arabidop | 0.463 | 0.332 | 0.344 | 2.6e-59 | |
| TAIR|locus:2020417 | 1101 | AT1G17230 [Arabidopsis thalian | 0.401 | 0.252 | 0.350 | 5.4e-59 |
| TAIR|locus:2042599 AT2G16250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1572 (558.4 bits), Expect = 1.9e-161, P = 1.9e-161
Identities = 330/645 (51%), Positives = 427/645 (66%)
Query: 43 DWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASG 102
DWP++ +PC WRG+QC+NG +I INISGF+RTRIG+LNP+F+VD L NLT LS FNASG
Sbjct: 53 DWPIKGDPCVDWRGIQCENGSIIGINISGFRRTRIGKLNPQFSVDPLRNLTRLSYFNASG 112
Query: 103 LSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATL 162
L+LPG+IPEWFG L AL+VLDL SCS++G +P + GNL+ L L LS NSL VP++L
Sbjct: 113 LALPGTIPEWFGVSLLALEVLDLSSCSVNGVVPFTLGNLTSLRTLNLSQNSLTSLVPSSL 172
Query: 163 GELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLS 222
G+L LS LDLSRN TG +P + S L NL L+++SN+ TG IP GL +LS + LN S
Sbjct: 173 GQLLNLSQLDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFS 232
Query: 223 DNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGL 282
N+ + IPSE+G+L L++ DLS NS+SGS+P ELR L L + I +N L G L L
Sbjct: 233 SNSFSSPIPSELGDLVNLVDFDLSINSLSGSVPQELRKLSKLQLMAIGDNLLSGTLPVDL 292
Query: 283 FPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFN 342
F QLQ + L N G+LP + P LR LD+++NN TG P S + + + +
Sbjct: 293 FSAESQLQTLVLRENGFSGSLPDVCWSLPKLRILDIAKNNFTGLLPYSSYDSDQIAEMVD 352
Query: 343 ISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADD-RGRNVSLGRNCLQSVASQRSSEDC 401
IS+N YG+L + R+F ++DLS NYF+G + D G NVS+ NCL++ Q+ S C
Sbjct: 353 ISSNTFYGEL-TPILRRFRIMDLSGNYFEGKLPDYVTGENVSVTSNCLRNERRQKPSAIC 411
Query: 402 RLFYAERGLTFDNFGVLEPMQPPVPQHEEKSSKRWXXXXXXXXXXXXXXXXXXXXXXXXX 461
FY RGL FD+FG QP S+R
Sbjct: 412 AAFYKSRGLDFDDFGRPNLTQPTSKNASSGISRRTVIILAAVGGGVAFILLFVILPIILV 471
Query: 462 RRC--DKGIANQRGSANVGPVPEGH-STPPPKDPAI--VSGVGDSFTYEQLLRATGNFSE 516
C + A QRG+ N P P G S PPK +S +G++F+YEQLL+AT F++
Sbjct: 472 L-CMRHRRRAAQRGN-NDRPKPAGEASQQPPKGAQTFDLSRLGNAFSYEQLLQATEEFND 529
Query: 517 TNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQC 576
NLIK+GHSG+LF+G L G VV+KK+ + K E Y+ EL+LFS+ H RLVP LG C
Sbjct: 530 ANLIKRGHSGNLFRGFLENGIPVVIKKIDVREGKSEGYISELELFSKAGHQRLVPFLGHC 589
Query: 577 LEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC 636
LE+E++K LVYK+M GDLASSL R ++ E D L+SLDWITRLKIA+GAAEGLSYLHHEC
Sbjct: 590 LENESQKFLVYKFMRHGDLASSLFRKSENEGDGLKSLDWITRLKIALGAAEGLSYLHHEC 649
Query: 637 NPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFL 681
+PPLVHRDVQASSILLDDKFEVRLGSLSE +AQGD++Q+ ++R L
Sbjct: 650 SPPLVHRDVQASSILLDDKFEVRLGSLSEAYAQGDAYQSRISRLL 694
|
|
| TAIR|locus:2136313 AT4G39270 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
Identities = 265/577 (45%), Positives = 353/577 (61%)
Query: 130 LSGSIPGSFGN-LSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISL 188
L G IP FG+ L L VL LS S+ G +P +L L L LDLS+N + G+IP +++
Sbjct: 113 LPGPIPALFGSSLLTLEVLDLSSCSITGTIPESLTRLSHLKVLDLSKNAINGDIPLSLTS 172
Query: 189 LGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKN 248
L NL+ L+L+SN G IP+ + +LS +Q LNLS N LT IP +G+L LI+LDLS N
Sbjct: 173 LQNLSILDLSSNSVFGSIPANIGALSKLQRLNLSRNTLTSSIPPSLGDLSVLIDLDLSFN 232
Query: 249 SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF 308
+SGS+P +L+GLRNL LVI+ N L G L LF L +LQ++D G+ GALP+ L+
Sbjct: 233 GMSGSVPSDLKGLRNLQTLVIAGNRLSGSLPPDLFSLLSKLQIIDFRGSGFIGALPSRLW 292
Query: 309 LRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSN 368
P L+FLD+S N+ + P + + +++ ++ NIS NM YG+L + +F ++DLS N
Sbjct: 293 SLPELKFLDISGNHFSDMLPNTTVSFDSTVSMLNISGNMFYGNL-TLLLTRFQVVDLSEN 351
Query: 369 YFQGTVADDRGRNVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQH 428
YF+G + D SL NCLQ QR DC LFY+++GLTF+NFG QH
Sbjct: 352 YFEGKIPDFVPTRASLSNNCLQGPEKQRKLSDCTLFYSKKGLTFNNFG----------QH 401
Query: 429 EEKSSKR--WXXXXXXXXXXXXXXXXXX---------XXXXXXXRRCDKGIANQ-RGSAN 476
EEK S + W RR +N RG N
Sbjct: 402 EEKKSSKTSWLSHTKIVILAAVGGSILLMLILIVLPITVSFCVRRRNRSSTSNHPRGRHN 461
Query: 477 -VGPVPEGHSTPPPKDPAIVSG-VGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLA 534
VGP+P + P +I G +G SFTY+QLL AT FS++NLIKKG SGDLFKG L
Sbjct: 462 GVGPLPPDETLPSRGGVSINFGSLGSSFTYQQLLNATKEFSDSNLIKKGQSGDLFKGVLE 521
Query: 535 GGTTVVVKKVSLHSFKK-ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCG 593
G +VVK++SL S K E+Y+ ELD FSR +H R++P +G+ LE T K LVYKYM+
Sbjct: 522 NGVQIVVKRISLESTKNNEAYLTELDFFSRFAHPRIIPFVGKSLESATHKFLVYKYMLNR 581
Query: 594 DLASSL-HRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652
DL SSL ++ L D+ L+SLDWITRLKIA+G AEGL+YLHH+C+P +VHRD+QASSILL
Sbjct: 582 DLPSSLFYKSNSLVDNGLRSLDWITRLKIALGVAEGLAYLHHDCSPSVVHRDIQASSILL 641
Query: 653 DDKFEVRLGSLSEL-HAQGDSHQNVLTRFLWRQLYQS 688
DDKFEVRLGS S+ H + + + R L +L QS
Sbjct: 642 DDKFEVRLGSFSKACHQENNGRPRKIARLL--RLSQS 676
|
|
| TAIR|locus:2120362 GSO1 "GASSHO1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 412 (150.1 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 108/270 (40%), Positives = 147/270 (54%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
D+ G +++ N +GL L GSI WFG R L LDL S +L G IP + NL+ L
Sbjct: 66 DNTGLFRVIA-LNLTGLGLTGSISPWFG-RFDNLIHLDLSSNNLVGPIPTALSNLTSLES 123
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQI 206
L+L N L G +P+ LG L + +L + N L G+IP + L NL L LAS TG I
Sbjct: 124 LFLFSNQLTGEIPSQLGSLVNIRSLRIGDNELVGDIPETLGNLVNLQMLALASCRLTGPI 183
Query: 207 PSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAK 266
PS L L +Q L L DN L G IP+E+GN L ++N ++G++P EL L NL
Sbjct: 184 PSQLGRLVRVQSLILQDNYLEGPIPAELGNCSDLTVFTAAENMLNGTIPAELGRLENLEI 243
Query: 267 LVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS 326
L ++ N L G++ L + QLQ + L N+L G +P +L NL+ LDLS NN+TG
Sbjct: 244 LNLANNSLTGEIPSQL-GEMSQLQYLSLMANQLQGLIPKSLADLGNLQTLDLSANNLTGE 302
Query: 327 WPILSTNGNASGAV-FNISNNMLYGDLNSS 355
P N S + ++NN L G L S
Sbjct: 303 IP--EEFWNMSQLLDLVLANNHLSGSLPKS 330
|
|
| TAIR|locus:2005507 ER "ERECTA" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 421 (153.3 bits), Expect = 3.3e-62, Sum P(2) = 3.3e-62
Identities = 115/307 (37%), Positives = 164/307 (53%)
Query: 77 IGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPG 136
+G ++P L LT L F+ SL GSIPE G A QVLDL L+G IP
Sbjct: 201 VGNISP-----DLCQLTGLWYFDVRNNSLTGSIPETIG-NCTAFQVLDLSYNQLTGEIPF 254
Query: 137 SFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLT--- 193
G L ++ L L GN L+G +P+ +G ++ L+ LDLS NLL+G IP +LGNLT
Sbjct: 255 DIGFL-QVATLSLQGNQLSGKIPSVIGLMQALAVLDLSGNLLSGSIP---PILGNLTFTE 310
Query: 194 RLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGS 253
+L L SN TG IP L ++S + +L L+DN LTG IP E+G L L +L+++ N + G
Sbjct: 311 KLYLHSNKLTGSIPPELGNMSKLHYLELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGP 370
Query: 254 LPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNL 313
+P L NL L + N G + F L+ + ++LS N + G +P L NL
Sbjct: 371 IPDHLSSCTNLNSLNVHGNKFSGTIPRA-FQKLESMTYLNLSSNNIKGPIPVELSRIGNL 429
Query: 314 RFLDLSRNNITGSWPILSTNGNASGAV-FNISNNMLYGDL--NSSSFRKFSLIDLSSNYF 370
LDLS N I G P S+ G+ + N+S N + G + + + R IDLS+N
Sbjct: 430 DTLDLSNNKINGIIP--SSLGDLEHLLKMNLSRNHITGVVPGDFGNLRSIMEIDLSNNDI 487
Query: 371 QGTVADD 377
G + ++
Sbjct: 488 SGPIPEE 494
|
|
| TAIR|locus:2085949 AT3G24240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 446 (162.1 bits), Expect = 8.4e-62, Sum P(2) = 8.4e-62
Identities = 115/317 (36%), Positives = 169/317 (53%)
Query: 69 ISGFKRTRIGRLNPRFA--VDS-LGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDL 125
+SG + RIG N + + S +G+ + L+ + S+ G++P G +L L+ L +
Sbjct: 200 LSGLEVIRIGG-NKEISGQIPSEIGDCSNLTVLGLAETSVSGNLPSSLG-KLKKLETLSI 257
Query: 126 RSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNA 185
+ +SG IP GN S L L+L NSL+G++P +G+L KL L L +N L G IP
Sbjct: 258 YTTMISGEIPSDLGNCSELVDLFLYENSLSGSIPREIGQLTKLEQLFLWQNSLVGGIPEE 317
Query: 186 ISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDL 245
I NL ++L+ N +G IPS + LS ++ +SDN +G IP+ + N L++L L
Sbjct: 318 IGNCSNLKMIDLSLNLLSGSIPSSIGRLSFLEEFMISDNKFSGSIPTTISNCSSLVQLQL 377
Query: 246 SKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPA 305
KN ISG +P EL L L N LEG + GL D LQ +DLS N L G +P+
Sbjct: 378 DKNQISGLIPSELGTLTKLTLFFAWSNQLEGSIPPGLADCTD-LQALDLSRNSLTGTIPS 436
Query: 306 TLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAV-FNISNNMLYGDLNSS--SFRKFSL 362
LF+ NL L L N+++G P GN S V + N + G++ S S +K +
Sbjct: 437 GLFMLRNLTKLLLISNSLSGFIP--QEIGNCSSLVRLRLGFNRITGEIPSGIGSLKKINF 494
Query: 363 IDLSSNYFQGTVADDRG 379
+D SSN G V D+ G
Sbjct: 495 LDFSSNRLHGKVPDEIG 511
|
|
| TAIR|locus:2092810 BRL3 "BRI1-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 368 (134.6 bits), Expect = 2.8e-60, Sum P(2) = 2.8e-60
Identities = 103/335 (30%), Positives = 175/335 (52%)
Query: 57 VQCQNGQVI-AINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGY 115
V N +++ +N+S + + IG++ P D GN L + + G IP
Sbjct: 245 VSLSNCKLLETLNLS--RNSLIGKI-P--GDDYWGNFQNLRQLSLAHNLYSGEIPPELSL 299
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATL-GELKKLSNLDLS 174
L+VLDL SL+G +P SF + L L L N L+G+ +T+ +L +++NL L
Sbjct: 300 LCRTLEVLDLSGNSLTGQLPQSFTSCGSLQSLNLGNNKLSGDFLSTVVSKLSRITNLYLP 359
Query: 175 RNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSS---IQFLNLSDNALTGFIP 231
N ++G +P +++ NL L+L+SN FTG++PSG SL S ++ L +++N L+G +P
Sbjct: 360 FNNISGSVPISLTNCSNLRVLDLSSNEFTGEVPSGFCSLQSSSVLEKLLIANNYLSGTVP 419
Query: 232 SEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQV 291
E+G L +DLS N+++G +P E+ L L+ LV+ N L G + E + L+
Sbjct: 420 VELGKCKSLKTIDLSFNALTGLIPKEIWTLPKLSDLVMWANNLTGGIPESICVDGGNLET 479
Query: 292 VDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGD 351
+ L+ N L G+LP ++ N+ ++ LS N +TG P+ A+ + NN L G+
Sbjct: 480 LILNNNLLTGSLPESISKCTNMLWISLSSNLLTGEIPV-GIGKLEKLAILQLGNNSLTGN 538
Query: 352 LNSS--SFRKFSLIDLSSNYFQGTVADDRGRNVSL 384
+ S + + +DL+SN G + + L
Sbjct: 539 IPSELGNCKNLIWLDLNSNNLTGNLPGELASQAGL 573
|
|
| TAIR|locus:2182855 ERL2 "ERECTA-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 418 (152.2 bits), Expect = 7.4e-60, Sum P(2) = 7.4e-60
Identities = 119/343 (34%), Positives = 184/343 (53%)
Query: 92 LTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSG 151
LT L F+ G +L G+IPE G + ++LD+ ++G IP + G L ++ L L G
Sbjct: 216 LTGLWYFDVRGNNLTGTIPESIG-NCTSFEILDVSYNQITGVIPYNIGFL-QVATLSLQG 273
Query: 152 NSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLT---RLNLASNFFTGQIPS 208
N L G +P +G ++ L+ LDLS N LTG IP +LGNL+ +L L N TGQIP
Sbjct: 274 NKLTGRIPEVIGLMQALAVLDLSDNELTGPIP---PILGNLSFTGKLYLHGNKLTGQIPP 330
Query: 209 GLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLV 268
L ++S + +L L+DN L G IP E+G L++L EL+L+ N++ G +P + L +
Sbjct: 331 ELGNMSRLSYLQLNDNELVGKIPPELGKLEQLFELNLANNNLVGLIPSNISSCAALNQFN 390
Query: 269 ISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP 328
+ N L G + F L L ++LS N G +PA L NL LDLS NN +GS P
Sbjct: 391 VHGNFLSGAVPLE-FRNLGSLTYLNLSSNSFKGKIPAELGHIINLDTLDLSGNNFSGSIP 449
Query: 329 ILSTNGNASGA-VFNISNNMLYGDLNSS--SFRKFSLIDLSSNYFQGTVADDRGR--NVS 383
+ T G+ + N+S N L G L + + R +ID+S N+ G + + G+ N++
Sbjct: 450 L--TLGDLEHLLILNLSRNHLNGTLPAEFGNLRSIQIIDVSFNFLAGVIPTELGQLQNIN 507
Query: 384 ---LGRNCLQSVASQRSSEDCRLFYAERGLTFDNF-GVLEPMQ 422
L N + + + +C A ++F+N G++ PM+
Sbjct: 508 SLILNNNKIHGKIPDQLT-NC-FSLANLNISFNNLSGIIPPMK 548
|
|
| TAIR|locus:2156349 GSO2 "GASSHO 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 410 (149.4 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 111/293 (37%), Positives = 152/293 (51%)
Query: 89 LGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLY 148
LG+L L S L G+IPE FG L LQ+L L SC L+G IP FG L +L L
Sbjct: 140 LGSLVNLKSLKLGDNELNGTIPETFG-NLVNLQMLALASCRLTGLIPSRFGRLVQLQTLI 198
Query: 149 LSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPS 208
L N L G +PA +G L+ + N L G +P ++ L NL LNL N F+G+IPS
Sbjct: 199 LQDNELEGPIPAEIGNCTSLALFAAAFNRLNGSLPAELNRLKNLQTLNLGDNSFSGEIPS 258
Query: 209 GLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLV 268
L L SIQ+LNL N L G IP + L L LDLS N+++G + E + L LV
Sbjct: 259 QLGDLVSIQYLNLIGNQLQGLIPKRLTELANLQTLDLSSNNLTGVIHEEFWRMNQLEFLV 318
Query: 269 ISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP 328
+++N L G L + + L+ + LS +L G +PA + +L+ LDLS N +TG P
Sbjct: 319 LAKNRLSGSLPKTICSNNTSLKQLFLSETQLSGEIPAEISNCQSLKLLDLSNNTLTGQIP 378
Query: 329 ILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLID--LSSNYFQGTVADDRG 379
S ++NN L G L+SS +L + L N +G V + G
Sbjct: 379 D-SLFQLVELTNLYLNNNSLEGTLSSSISNLTNLQEFTLYHNNLEGKVPKEIG 430
|
|
| TAIR|locus:2167948 ERL1 "ERECTA-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 410 (149.4 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 118/343 (34%), Positives = 179/343 (52%)
Query: 92 LTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSG 151
LT L F+ G +L G+IPE G + Q+LD+ ++G IP + G L ++ L L G
Sbjct: 214 LTGLWYFDVRGNNLTGTIPESIG-NCTSFQILDISYNQITGEIPYNIGFL-QVATLSLQG 271
Query: 152 NSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLT---RLNLASNFFTGQIPS 208
N L G +P +G ++ L+ LDLS N L G IP +LGNL+ +L L N TG IPS
Sbjct: 272 NRLTGRIPEVIGLMQALAVLDLSDNELVGPIP---PILGNLSFTGKLYLHGNMLTGPIPS 328
Query: 209 GLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLV 268
L ++S + +L L+DN L G IP E+G L++L EL+L+ N + G +P + L +
Sbjct: 329 ELGNMSRLSYLQLNDNKLVGTIPPELGKLEQLFELNLANNRLVGPIPSNISSCAALNQFN 388
Query: 269 ISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP 328
+ N L G + F L L ++LS N G +P L NL LDLS NN +GS P
Sbjct: 389 VHGNLLSGSIPLA-FRNLGSLTYLNLSSNNFKGKIPVELGHIINLDKLDLSGNNFSGSIP 447
Query: 329 ILSTNGNASGA-VFNISNNMLYGDLNSS--SFRKFSLIDLSSNYFQGTVADDRGR--NVS 383
+ T G+ + N+S N L G L + + R +ID+S N G + + G+ N++
Sbjct: 448 L--TLGDLEHLLILNLSRNHLSGQLPAEFGNLRSIQMIDVSFNLLSGVIPTELGQLQNLN 505
Query: 384 ---LGRNCLQSVASQRSSEDCRLFYAERGLTFDNF-GVLEPMQ 422
L N L + + +C ++F+N G++ PM+
Sbjct: 506 SLILNNNKLHGKIPDQLT-NC-FTLVNLNVSFNNLSGIVPPMK 546
|
|
| TAIR|locus:2020417 AT1G17230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 367 (134.2 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 100/285 (35%), Positives = 150/285 (52%)
Query: 105 LPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGE 164
L GS+P+ +L L L L LSG IP S GN+SRL VL L N G++P +G+
Sbjct: 223 LEGSLPKQLE-KLQNLTDLILWQNRLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGK 281
Query: 165 LKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDN 224
L K+ L L N LTGEIP I L + ++ + N TG IP + +++ L+L +N
Sbjct: 282 LTKMKRLYLYTNQLTGEIPREIGNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHLFEN 341
Query: 225 ALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFP 284
L G IP E+G L L +LDLS N ++G++P EL+ L L L + +N LEG++ L
Sbjct: 342 ILLGPIPRELGELTLLEKLDLSINRLNGTIPQELQFLPYLVDLQLFDNQLEGKIPP-LIG 400
Query: 285 TLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPI-LSTNGNASGAVFNI 343
V+D+S N L G +PA L L L N ++G+ P L T + + + +
Sbjct: 401 FYSNFSVLDMSANSLSGPIPAHFCRFQTLILLSLGSNKLSGNIPRDLKTCKSLTKLM--L 458
Query: 344 SNNMLYGDLNSSSF--RKFSLIDLSSNYFQGTVADDRGRNVSLGR 386
+N L G L F + + ++L N+ G ++ D G+ +L R
Sbjct: 459 GDNQLTGSLPIELFNLQNLTALELHQNWLSGNISADLGKLKNLER 503
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| C0LGK4 | Y2165_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.5324 | 0.9408 | 0.7125 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 693 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 8e-50 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 9e-46 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-44 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-37 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-16 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 7e-16 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-15 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 2e-14 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 3e-14 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 3e-14 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 4e-14 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-13 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 8e-12 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-11 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-11 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 6e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 7e-11 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 8e-11 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 9e-11 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-09 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 3e-09 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 4e-09 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 1e-08 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-08 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 3e-08 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 4e-08 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 5e-08 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 1e-07 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 2e-07 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 2e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-06 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 1e-06 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 1e-06 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 4e-06 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 4e-06 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 8e-06 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 1e-05 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-05 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 2e-05 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 3e-05 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 3e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 4e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 4e-05 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 4e-05 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 5e-05 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 5e-05 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 6e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 7e-05 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 7e-05 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 9e-05 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 9e-05 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 1e-04 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 1e-04 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 1e-04 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 1e-04 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 1e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-04 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 2e-04 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-04 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 2e-04 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 2e-04 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 2e-04 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 2e-04 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 2e-04 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 2e-04 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 2e-04 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 2e-04 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 3e-04 | |
| PRK15370 | 754 | PRK15370, PRK15370, E3 ubiquitin-protein ligase Sl | 3e-04 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-04 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 3e-04 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 3e-04 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 4e-04 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 5e-04 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 5e-04 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 5e-04 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 7e-04 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 7e-04 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 7e-04 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 7e-04 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 8e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.001 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 0.001 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 0.001 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 0.002 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 0.002 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 0.002 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 0.002 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 0.002 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 0.002 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 0.002 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 0.003 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 0.004 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 0.004 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 0.004 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 0.004 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 187 bits (476), Expect = 8e-50
Identities = 166/583 (28%), Positives = 264/583 (45%), Gaps = 47/583 (8%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVL 147
S+ +L L S + S SL G IPE +L L++L L S + +G IP + +L RL VL
Sbjct: 279 SIFSLQKLISLDLSDNSLSGEIPELV-IQLQNLEILHLFSNNFTGKIPVALTSLPRLQVL 337
Query: 148 YLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIP 207
L N +G +P LG+ L+ LDLS N LTGEIP + GNL +L L SN G+IP
Sbjct: 338 QLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIP 397
Query: 208 SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKL 267
L + S++ + L DN+ +G +PSE L + LD+S N++ G + + +L L
Sbjct: 398 KSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQML 457
Query: 268 VISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSW 327
++ N G L + +L+ +DLS N+ GA+P L L L LS N ++G
Sbjct: 458 SLARNKFFGGLPD--SFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEI 515
Query: 328 PI-LSTNGNASGAVFNISNNMLYGDLNSS--SFRKFSLIDLSSNYFQGTVADDRGRNVSL 384
P LS+ ++S+N L G + +S S +DLS N G + + G SL
Sbjct: 516 PDELSSCKKLVS--LDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESL 573
Query: 385 GRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVL---EPMQPPVPQHEEKSSKRWIFILV 441
+ + S F A L + P + + W F +
Sbjct: 574 VQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYIT 633
Query: 442 GVFGGLGFIAILVIVLVLILRRCD---KGIANQRGSANVGPVPEGHSTPPPKDPAIVSGV 498
G +A++ V I R + K + N+ G+ + S V
Sbjct: 634 CTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWEL--------------QFFDSKV 679
Query: 499 GDSFTYEQLLRATGNFSETNLIKKGHSGDLFKG-TLAGGTTVVVKKVSLHSFKKESYMME 557
S T +L + E N+I +G G +KG ++ G VVK+++ + S + +
Sbjct: 680 SKSITINDILSSL---KEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIAD 736
Query: 558 LDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWIT 617
++ H +V L+G C E L+++Y+ +L+ + L++L W
Sbjct: 737 ---MGKLQHPNIVKLIGLC-RSEKGAYLIHEYIEGKNLS-----------EVLRNLSWER 781
Query: 618 RLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660
R KIAIG A+ L +LH C+P +V ++ I++D K E L
Sbjct: 782 RRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL 824
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 175 bits (445), Expect = 9e-46
Identities = 115/315 (36%), Positives = 160/315 (50%), Gaps = 29/315 (9%)
Query: 90 GNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYL 149
G++ L + + S L G IP G +L+VLDL L G IP S NL+ L L L
Sbjct: 137 GSIPNLETLDLSNNMLSGEIPNDIGS-FSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTL 195
Query: 150 SGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSG 209
+ N L G +P LG++K L + L N L+GEIP I L +L L+L N TG IPS
Sbjct: 196 ASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSS 255
Query: 210 LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVI 269
L +L ++Q+L L N L+G IP + +L KLI LDLS NS+SG +P + L+NL L +
Sbjct: 256 LGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHL 315
Query: 270 SENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP- 328
N G++ L +L +LQV+ L NK G +P L NL LDLS NN+TG P
Sbjct: 316 FSNNFTGKIPVAL-TSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPE 374
Query: 329 ILSTNGNASGAVF----------------------NISNNMLYGDLNSSSFRKFSLI--- 363
L ++GN + + +N G+L S F K L+
Sbjct: 375 GLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGEL-PSEFTKLPLVYFL 433
Query: 364 DLSSNYFQGTVADDR 378
D+S+N QG + +
Sbjct: 434 DISNNNLQGRINSRK 448
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 169 bits (430), Expect = 7e-44
Identities = 107/277 (38%), Positives = 150/277 (54%), Gaps = 14/277 (5%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+L G IP G L +L LDL +L+G IP S GNL L L+L N L+G +P ++
Sbjct: 223 NLSGEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIF 281
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD 223
L+KL +LDLS N L+GEIP + L NL L+L SN FTG+IP L SL +Q L L
Sbjct: 282 SLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWS 341
Query: 224 NALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLF 283
N +G IP +G + L LDLS N+++G +P L NL KL++ N LEG++ + L
Sbjct: 342 NKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSL- 400
Query: 284 PTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG-----SWPILSTNGNASG 338
L+ V L N G LP+ P + FLD+S NN+ G W + S
Sbjct: 401 GACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQ----- 455
Query: 339 AVFNISNNMLYGDL-NSSSFRKFSLIDLSSNYFQGTV 374
+ +++ N +G L +S ++ +DLS N F G V
Sbjct: 456 -MLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAV 491
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 2e-37
Identities = 105/297 (35%), Positives = 158/297 (53%), Gaps = 8/297 (2%)
Query: 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGS-FGNLSRLNVLYL 149
N + + S + SG ++ G I +RLP +Q ++L + LSG IP F S L L L
Sbjct: 67 NSSRVVSIDLSGKNISGKISSAI-FRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNL 125
Query: 150 SGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSG 209
S N+ G++P G + L LDLS N+L+GEIPN I +L L+L N G+IP+
Sbjct: 126 SNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNS 183
Query: 210 LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVI 269
L +L+S++FL L+ N L G IP E+G + L + L N++SG +P E+ GL +L L +
Sbjct: 184 LTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDL 243
Query: 270 SENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPI 329
N L G + L L LQ + L NKL G +P ++F L LDLS N+++G P
Sbjct: 244 VYNNLTGPIPSSL-GNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPE 302
Query: 330 LSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADDRGRNVSL 384
L + SNN G + +S + ++ L SN F G + + G++ +L
Sbjct: 303 LVIQLQNLEILHLFSNN-FTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNL 358
|
Length = 968 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 78.7 bits (195), Expect = 3e-16
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 518 NLIKKGHSGDLFKGTL----AGGTTVVVKKVSLHSFKKESYMM--ELDLFSRVSHARLVP 571
+ +G G+++KG L T V VK + + ++E E + ++ H +V
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTD-LEDDSLQSLDWITRLKIAIGAAEGLS 630
LLG C E E LV +YM GDL L + +L L AI A+G+
Sbjct: 61 LLGVCTEEEPL-YLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119
Query: 631 YLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
YL + VHRD+ A + L+ + V++
Sbjct: 120 YLASK---KFVHRDLAARNCLVGEDLVVKIS 147
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 7e-16
Identities = 59/181 (32%), Positives = 85/181 (46%), Gaps = 38/181 (20%)
Query: 28 SALLDLRSSLGLRSR-DWPLRTEPC----RSWRGVQCQNGQVIAINISGFKRTRIGRLNP 82
SAL L+SSLGL R W +PC W G CQ F T+
Sbjct: 375 SALQTLKSSLGLPLRFGW--NGDPCVPQQHPWSGADCQ-----------FDSTK-----G 416
Query: 83 RFAVDSLGNLTLLSSFNASGLS--LPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGN 140
++ +D LG + GL +P I +L LQ ++L S+ G+IP S G+
Sbjct: 417 KWFIDGLG-------LDNQGLRGFIPNDIS-----KLRHLQSINLSGNSIRGNIPPSLGS 464
Query: 141 LSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAI-SLLGNLTRLNLAS 199
++ L VL LS NS G++P +LG+L L L+L+ N L+G +P A+ L + N
Sbjct: 465 ITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTD 524
Query: 200 N 200
N
Sbjct: 525 N 525
|
Length = 623 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 77.2 bits (191), Expect = 1e-15
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 18/147 (12%)
Query: 522 KGHSGDLFKGTL-----AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLG 574
+G G+++KGTL T V VK + + + +E ++ E + ++SH +V LLG
Sbjct: 9 EGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLG 68
Query: 575 QCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH 634
C + E +V +YM GDL L + + L L++A+ A+G+ YL
Sbjct: 69 VCTQGE-PLYIVTEYMPGGDLLDFLRK-------HGEKLTLKDLLQMALQIAKGMEYLE- 119
Query: 635 ECNPPLVHRDVQASSILLDDKFEVRLG 661
+ VHRD+ A + L+ + V++
Sbjct: 120 --SKNFVHRDLAARNCLVTENLVVKIS 144
|
Length = 258 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 75.4 bits (185), Expect = 2e-14
Identities = 72/231 (31%), Positives = 115/231 (49%), Gaps = 16/231 (6%)
Query: 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLS 150
NL L + SLP + LP L+ LDL LS +P NLS LN L LS
Sbjct: 141 NLKELDLSDNKIESLPSPLRN-----LPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLS 194
Query: 151 GNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGL 210
GN ++ ++P + L L LDLS N + E+ +++S L NL+ L L++N +P +
Sbjct: 195 GNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESI 251
Query: 211 YSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVIS 270
+LS+++ L+LS+N ++ S +G+L L ELDLS NS+S +LP L L L++
Sbjct: 252 GNLSNLETLDLSNNQIS--SISSLGSLTNLRELDLSGNSLSNALP-----LIALLLLLLE 304
Query: 271 ENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRN 321
+ L L+ + + + + + + P L + +L L N
Sbjct: 305 LLLNLLLTLKALELKLNSILLNNNILSNGETSSPEALSILESLNNLWTLDN 355
|
Length = 394 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 72.9 bits (180), Expect = 3e-14
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 20/159 (12%)
Query: 522 KGHSGDLFKGTL-----AGGTTVVVKKVSLHSFKK--ESYMMELDLFSRVSHARLVPLLG 574
+G G+++KG L V VK + + ++ E ++ E + ++ H +V LLG
Sbjct: 9 EGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLG 68
Query: 575 QCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH 634
C E E +V +YM GDL L + L L A+ A G+ YL
Sbjct: 69 VCTEEE-PLYIVMEYMEGGDL---LSYLRKNRP----KLSLSDLLSFALQIARGMEYLES 120
Query: 635 ECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGD 671
+ +HRD+ A + L+ + V++ LS D
Sbjct: 121 K---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 156
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 3e-14
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 17/147 (11%)
Query: 522 KGHSGDLFKGTL-----AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLG 574
+G G+++KGTL V VK + + + E ++ E + ++ H +V LLG
Sbjct: 9 EGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLG 68
Query: 575 QCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH 634
C E E ++V +YM GDL L L + + L L A+ A G+ YL
Sbjct: 69 VCTEEE-PLMIVMEYMPGGDL---LDY---LRKNRPKELSLSDLLSFALQIARGMEYLES 121
Query: 635 ECNPPLVHRDVQASSILLDDKFEVRLG 661
+ +HRD+ A + L+ + V++
Sbjct: 122 K---NFIHRDLAARNCLVGENLVVKIS 145
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 4e-14
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 14/139 (10%)
Query: 520 IKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQC 576
+ +G G ++ G V +K + E + E+++ +++H +V L G
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYG-V 59
Query: 577 LEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC 636
E E LV +Y G L L L L+I + EGL YLH
Sbjct: 60 FEDENHLYLVMEYCEGGSLKDLLKENE-------GKLSEDEILRILLQILEGLEYLHSN- 111
Query: 637 NPPLVHRDVQASSILLDDK 655
++HRD++ +ILLD
Sbjct: 112 --GIIHRDLKPENILLDSD 128
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 2e-13
Identities = 39/94 (41%), Positives = 54/94 (57%)
Query: 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT 227
+ L L L G IPN IS L +L +NL+ N G IP L S++S++ L+LS N+
Sbjct: 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFN 479
Query: 228 GFIPSEVGNLDKLIELDLSKNSISGSLPLELRGL 261
G IP +G L L L+L+ NS+SG +P L G
Sbjct: 480 GSIPESLGQLTSLRILNLNGNSLSGRVPAALGGR 513
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 2e-13
Identities = 32/89 (35%), Positives = 55/89 (61%)
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQI 206
L L L G +P + +L+ L +++LS N + G IP ++ + +L L+L+ N F G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 207 PSGLYSLSSIQFLNLSDNALTGFIPSEVG 235
P L L+S++ LNL+ N+L+G +P+ +G
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 8e-12
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK---ESYMMELDLFSRVSHAR 568
++ L+ +G G ++ G + VK V L + E+ E+ + S + H
Sbjct: 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN 60
Query: 569 LVPLLGQCLEHETEKLLVY-KYMVCGDLASSLHRVTDLEDDSLQSLDWITR--LKIAIGA 625
+V G + E L ++ +Y+ G L+S L + L + ++ TR L
Sbjct: 61 IVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKY---TRQIL------ 111
Query: 626 AEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
EGL+YLH +VHRD++ ++IL+D V+L
Sbjct: 112 -EGLAYLHSNG---IVHRDIKGANILVDSDGVVKLA 143
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 522 KGHSGDLFKGTLAG-GTTVVVKKVSLH---SFKKESYMMELDLFSRVSHARLVPLLGQCL 577
G G ++K G G V VK + S K ++ E+ + R+SH +V L+
Sbjct: 9 SGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID-AF 67
Query: 578 EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECN 637
E + LV +Y GDL L R L KIA+ GL YLH
Sbjct: 68 EDKDHLYLVMEYCEGGDLFDYLSR--------GGPLSEDEAKKIALQILRGLEYLHSN-- 117
Query: 638 PPLVHRDVQASSILLDDKFEVRLG 661
++HRD++ +ILLD+ V++
Sbjct: 118 -GIIHRDLKPENILLDENGVVKIA 140
|
Length = 260 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 3e-11
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 513 NFSETNLIKKGHSGDLF----KGTLAGGTTVVVKKVSLHSFKKESYMM----ELDLFSRV 564
N E + +G G++F KG G +V +L K E+ ELD+F ++
Sbjct: 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65
Query: 565 SHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSL--QSLDWITRLKIA 622
SH +V LLG C E E ++ +Y GDL L R T +D+ L L ++ +
Sbjct: 66 SHKNVVRLLGLCREAEPH-YMILEYTDLGDLKQFL-RATKSKDEKLKPPPLSTKQKVALC 123
Query: 623 IGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664
A G+ +L N VHRD+ A + L+ + EV++ LS
Sbjct: 124 TQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLLS 162
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 6e-11
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 16/144 (11%)
Query: 513 NFSETNLIKKGHSGDLFKG-TLAGGTTVVVKKVSLHSFKKESY---MMELDLFSRVSHAR 568
N+ +LI +G G ++KG L G V +K++SL K+E+ M E+DL + H
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
+V +G +E ++ +Y G L + + + ++ ++ +G
Sbjct: 61 IVKYIG-SIETSDSLYIILEYAENGSLRQIIKKFGPFPES--LVAVYVYQV------LQG 111
Query: 629 LSYLHHECNPPLVHRDVQASSILL 652
L+YLH + ++HRD++A++IL
Sbjct: 112 LAYLHEQ---GVIHRDIKAANILT 132
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 7e-11
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 25/117 (21%)
Query: 195 LNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSL 254
L L + G IP+ + L +Q +NLS N++ G IP +G++ L LDLS NS +GS+
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 255 PLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRP 311
P L GQL+ L++++L+GN L G +PA L R
Sbjct: 483 PESL-----------------GQLT--------SLRILNLNGNSLSGRVPAALGGRL 514
|
Length = 623 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 8e-11
Identities = 61/242 (25%), Positives = 93/242 (38%), Gaps = 41/242 (16%)
Query: 117 LPALQVLDLRSCSLSGSIPGSFGNLSR---LNVLYLSGNSLAGNVPATLGE-LK----KL 168
LQ LDL +L G +L R L L L+ N L L + LK L
Sbjct: 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPAL 139
Query: 169 SNLDLSRNLLTGE----IPNAISLLGNLTRLNLASNFFTGQ-IPS---GLYSLSSIQFLN 220
L L RN L G + A+ +L LNLA+N I + GL + +++ L+
Sbjct: 140 EKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLD 199
Query: 221 LSDNALT----GFIPSEVGNLDKLIELDLSKNSISG--------SLPLELRGLRNLAKLV 268
L++N LT + + +L L L+L N+++ +L L L
Sbjct: 200 LNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLL---TLS 256
Query: 269 ISENGLE----GQLSEGLFPTLDQLQVVDLSGNKL-----DGALPATLFLRPNLRFLDLS 319
+S N + L+E L + L +DL GNK + L L L +
Sbjct: 257 LSCNDITDDGAKDLAEVL-AEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVK 315
Query: 320 RN 321
+
Sbjct: 316 DD 317
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 9e-11
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 519 LIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLE 578
I KG GD+ G G V VK + S ++++ E + + + H LV LLG L+
Sbjct: 13 TIGKGEFGDVMLGDYRG-QKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQ 71
Query: 579 HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNP 638
+V +YM G L V L + +L A+ EG+ YL +
Sbjct: 72 GNP-LYIVTEYMAKGSL------VDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK--- 121
Query: 639 PLVHRDVQASSILLDD 654
VHRD+ A ++L+ +
Sbjct: 122 NFVHRDLAARNVLVSE 137
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 1e-09
Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 519 LIKKGHSGDLFKGTLAGGTTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQC 576
I KG+ GD++KG L G T V VK + +L K ++ E ++ + H +V L+G C
Sbjct: 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61
Query: 577 LEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC 636
++ + +V + + G L + L + + L L++++ AA G+ YL +
Sbjct: 62 VQKQP-IYIVMELVPGGSLLTFLRKKKN-------RLTVKKLLQMSLDAAAGMEYLESKN 113
Query: 637 NPPLVHRDVQASSILLDDKFEVRL 660
+HRD+ A + L+ + +++
Sbjct: 114 ---CIHRDLAARNCLVGENNVLKI 134
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 57.5 bits (140), Expect = 3e-09
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 15/147 (10%)
Query: 518 NLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK--ESYMMELDLFSRVSHARLVPLLG 574
+ +G G ++ G V +K + KK E + E+ + ++ H +V L
Sbjct: 5 EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYD 64
Query: 575 QCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH 634
E E + LV +Y GDL L + L +D + L YLH
Sbjct: 65 -VFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEAR--------FYLRQILSALEYLHS 115
Query: 635 ECNPPLVHRDVQASSILLDDKFEVRLG 661
+ +VHRD++ +ILLD+ V+L
Sbjct: 116 KG---IVHRDLKPENILLDEDGHVKLA 139
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 4e-09
Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 518 NLIKKGHSGDLFKGTLAGGTT-----VVVKKVSLHSFKKESYMM--ELDLFSRVSHARLV 570
+L+++G G +F G L V VK V H+ + + ++ E L +SH ++
Sbjct: 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNIL 71
Query: 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
P+L C+E ++Y YM G+L L + E ++ Q+L + +AI A G+S
Sbjct: 72 PILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMS 131
Query: 631 YLHHECNPPLVHRDVQASSILLDDKFEVRL 660
YLH ++H+D+ A + ++D++ +V++
Sbjct: 132 YLH---KRGVIHKDIAARNCVIDEELQVKI 158
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 24/156 (15%)
Query: 523 GHSGDLFKGTLAG------GTTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLG 574
G G ++KG L G T+V +K K + ++ + E +L S + H +V LLG
Sbjct: 16 GAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLG 75
Query: 575 QCLEHETEKLLVYKYMVCGDLASSLHR--------VTDLEDDSLQSLDWITRLKIAIGAA 626
C + + +L ++Y+ GDL L R ++ SLD L IAI A
Sbjct: 76 VCTKEQPTCML-FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIA 134
Query: 627 EGLSYL--HHECNPPLVHRDVQASSILLDDKFEVRL 660
G+ YL HH VHRD+ A + L+ + V++
Sbjct: 135 AGMEYLSSHH-----FVHRDLAARNCLVGEGLTVKI 165
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 520 IKKGHSGDLFKGT-LAGGTTVVVKKVSLHS-FKKESYMMELDLFSRVSHARLVPLLGQCL 577
I KG G+++K G V +K + L S KKE + E+ + + H +V G
Sbjct: 8 IGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYG-SY 66
Query: 578 EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLD--WITRLKIAIGAAEGLSYLHHE 635
+ E +V ++ G L DL + Q+L I + +GL YLH
Sbjct: 67 LKKDELWIVMEFCSGGSL-------KDLLKSTNQTLTESQIA--YVCKELLKGLEYLH-- 115
Query: 636 CNPPLVHRDVQASSILLDDKFEVRL 660
+ ++HRD++A++ILL EV+L
Sbjct: 116 -SNGIIHRDIKAANILLTSDGEVKL 139
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 515 SETNLIKK---GHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVP 571
L +K G G+++ GT G T V VK + + E+++ E + ++ H +LV
Sbjct: 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQ 65
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
L C E E +V +YM G L L + L + +A AEG++Y
Sbjct: 66 LYAVCSEEEP-IYIVTEYMSKGSLLDFLK------SGEGKKLRLPQLVDMAAQIAEGMAY 118
Query: 632 LHHECNPPLVHRDVQASSILLDDK 655
L +HRD+ A +IL+ +
Sbjct: 119 LESR---NYIHRDLAARNILVGEN 139
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 4e-08
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 22/158 (13%)
Query: 520 IKKGHSGDLFKGTLAGG------TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVP 571
+ +G G +F G V VK K + + ++ + E +L + H +V
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLH------RVTDLEDDSLQSLDWITRLKIAIGA 625
G C E ++V++YM GDL L D + L L+IA+
Sbjct: 73 FYGVCTE-GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQI 131
Query: 626 AEGLSYL--HHECNPPLVHRDVQASSILLDDKFEVRLG 661
A G+ YL H VHRD+ + L+ V++G
Sbjct: 132 ASGMVYLASQH-----FVHRDLATRNCLVGYDLVVKIG 164
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 5e-08
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 19/142 (13%)
Query: 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKK-------ESYMMELDLFSRVSHARLV 570
++ KG G ++ G G + VK+V L + E E+DL + H +V
Sbjct: 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65
Query: 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
LG CL+ T + + +++ G ++S L+R L + K +G++
Sbjct: 66 QYLGTCLDDNTISIFM-EFVPGGSISSILNRFGPLPE--------PVFCKYTKQILDGVA 116
Query: 631 YLHHECNPPLVHRDVQASSILL 652
YLH+ C +VHRD++ ++++L
Sbjct: 117 YLHNNC---VVHRDIKGNNVML 135
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 1e-07
Identities = 25/59 (42%), Positives = 31/59 (52%)
Query: 120 LQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLL 178
L+ LDL + L+ G+F L L VL LSGN+L P L L +LDLS N L
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 2e-07
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 38/160 (23%)
Query: 518 NLIKKGHSGDLFKGTLAGG----TTVVVKKVS-------LHSFKKESYMMELDLFSRVSH 566
+I KGH G ++ GTL VK ++ + F KE +M SH
Sbjct: 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIM-----KDFSH 55
Query: 567 ARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHR------VTDLEDDSLQSLDWITRLK 620
++ LLG CL E L+V YM GDL + + V DL LQ
Sbjct: 56 PNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQ--------- 106
Query: 621 IAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660
A+G+ YL + VHRD+ A + +LD+ F V++
Sbjct: 107 ----VAKGMEYL---ASKKFVHRDLAARNCMLDESFTVKV 139
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 2e-07
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 519 LIKKGHSGDLFKGTLAGGTTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQC 576
L+ KG+ G++FKGTL T V VK K L K ++ E + + H +V L+G C
Sbjct: 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61
Query: 577 LEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHE- 635
+ + +V + + GD S L + D + + L +K A+ AA G++YL +
Sbjct: 62 TQRQP-IYIVMELVPGGDFLSFLRKKKD--ELKTKQL-----VKFALDAAAGMAYLESKN 113
Query: 636 CNPPLVHRDVQASSILLDD 654
C +HRD+ A + L+ +
Sbjct: 114 C----IHRDLAARNCLVGE 128
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 1e-06
Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 28/113 (24%)
Query: 262 RNLAKLVISENGLEGQLSEGLFPT----LDQLQVVDLSGNKLDGALPATLFLRPNLRFLD 317
K I GL+ Q G P L LQ ++LSGN + G +P +L +L LD
Sbjct: 413 STKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLD 472
Query: 318 LSRNNITGSWP----------ILSTNGNA--------------SGAVFNISNN 346
LS N+ GS P IL+ NGN+ A FN ++N
Sbjct: 473 LSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDN 525
|
Length = 623 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 1e-06
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 520 IKKGHSGD----LFKGTLAGGTTVVVKKVSLHSFKKE--SYMMELDLFSRVSHARLVPLL 573
+ G+SG L + T G + VK + L + + ELD+ + + +V
Sbjct: 9 LGAGNSGVVSKVLHRPT---GKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFY 65
Query: 574 GQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLH 633
G + + + +YM G L L V + + KIA+ +GL+YLH
Sbjct: 66 GAFY-NNGDISICMEYMDGGSLDKILKEVQGRIPERILG-------KIAVAVLKGLTYLH 117
Query: 634 HECNPPLVHRDVQASSILLDDKFEVRL 660
+ ++HRDV+ S+IL++ + +++L
Sbjct: 118 EKHK--IIHRDVKPSNILVNSRGQIKL 142
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 1e-06
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 11/141 (7%)
Query: 520 IKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEH 579
I G G ++ G V +K + + +E ++ E + ++SH +LV L G C E
Sbjct: 12 IGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTE- 70
Query: 580 ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPP 639
+ LV+++M G L +D T L + + EG++YL
Sbjct: 71 RSPICLVFEFMEHGCL-------SDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN--- 120
Query: 640 LVHRDVQASSILLDDKFEVRL 660
++HRD+ A + L+ + V++
Sbjct: 121 VIHRDLAARNCLVGENQVVKV 141
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 4e-06
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 523 GHSGDLFKGTLAG-GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581
G G++++G TV VK + + + E ++ E + + H LV LLG C E
Sbjct: 17 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREP 75
Query: 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLV 641
++ ++M G+L L Q ++ + L +A + + YL + +
Sbjct: 76 PFYIITEFMTYGNLLDYLRECNR------QEVNAVVLLYMATQISSAMEYLEKK---NFI 126
Query: 642 HRDVQASSILLDDKFEVRLGS--LSELHAQGDSH 673
HRD+ A + L+ + V++ LS L GD++
Sbjct: 127 HRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY 159
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 4e-06
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 15/119 (12%)
Query: 538 TVVVK--KVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMVCGD 594
V VK K + HS ++E+ M EL + S + +H +V LLG C L++ +Y GD
Sbjct: 67 KVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGAC-TIGGPILVITEYCCYGD 125
Query: 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHE-CNPPLVHRDVQASSILL 652
L + L R + +S +L+ + L + A+G+++L + C +HRD+ A ++LL
Sbjct: 126 LLNFLRR----KRESFLTLEDL--LSFSYQVAKGMAFLASKNC----IHRDLAARNVLL 174
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 8e-06
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 520 IKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEH 579
I KG GD+ G G V VK + + ++++ E + +++ H+ LV LLG +E
Sbjct: 14 IGKGEFGDVMLGDYRG-NKVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 580 ETEKLLVYKYMVCGDLASSLHR--VTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECN 637
+ +V +YM G L L + L D L LK ++ E + YL E N
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--------LKFSLDVCEAMEYL--EAN 121
Query: 638 PPLVHRDVQASSILLDD 654
VHRD+ A ++L+ +
Sbjct: 122 -NFVHRDLAARNVLVSE 137
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 1e-05
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 518 NLIKKGHSGDLFKGTL-------AGGTTVVVK---KVSLHSFKKESYMMELDLFSRVSHA 567
N + G G++++GT +G V VK K + KKE ++ E L S +H
Sbjct: 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKE-FLKEAHLMSNFNHP 59
Query: 568 RLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE 627
+V LLG CL +E + +++ + M GDL S L R +E L L I + A+
Sbjct: 60 NIVKLLGVCLLNEPQYIIM-ELMEGGDLLSYL-RDARVERFGPPLLTLKELLDICLDVAK 117
Query: 628 GLSYLHHECNPPLVHRDVQASSILLDDK 655
G YL +HRD+ A + L+ +K
Sbjct: 118 GCVYLE---QMHFIHRDLAARNCLVSEK 142
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 2e-05
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
Query: 520 IKKGHSGDLFKGTL-AGGTTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQC 576
I +G+ G++F G L A T V VK + +L K ++ E + + SH +V L+G C
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62
Query: 577 LEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC 636
T+K +Y M +L +T L + + L +++ AA G+ YL +
Sbjct: 63 ----TQKQPIYIVM---ELVQGGDFLTFLRTEGPR-LKVKELIQMVENAAAGMEYLESKH 114
Query: 637 NPPLVHRDVQASSILLDDK 655
+HRD+ A + L+ +K
Sbjct: 115 ---CIHRDLAARNCLVTEK 130
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 26/156 (16%)
Query: 522 KGHSGDLFKGTLAG------GTTVVVKKVS--------LHSFKKESYMMELDLFSRVSHA 567
+G G +++G G T V +K V+ + + S M E + H
Sbjct: 16 QGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFN-----CH- 69
Query: 568 RLVPLLGQCLEHETEKLLVYKYMVCGDLASSL--HRVTDLEDDSLQSLDWITRLKIAIGA 625
+V LLG L+V + M GDL S L R + L +++A
Sbjct: 70 HVVRLLGVVST-GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEI 128
Query: 626 AEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
A+G++YL + VHRD+ A + ++ + V++G
Sbjct: 129 ADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 20/149 (13%)
Query: 506 QLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVS 565
QL++ GN G G+++ GT G T V VK + + ES++ E + ++
Sbjct: 9 QLIKKLGN---------GQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLR 59
Query: 566 HARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGA 625
H +LV L + E +V +YM G L + L+D ++L + +A
Sbjct: 60 HDKLVQLYA--VVSEEPIYIVTEYMSKGSL------LDFLKDGEGRALKLPNLVDMAAQV 111
Query: 626 AEGLSYLHHECNPPLVHRDVQASSILLDD 654
A G++Y+ +HRD+++++IL+ D
Sbjct: 112 AAGMAYIERM---NYIHRDLRSANILVGD 137
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 3e-05
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 34/163 (20%)
Query: 510 ATGNFSETNLIKKGHSGDLFKG-TLAGGTTVVVKKVSLHSFKKE---SYMMELDLFSRVS 565
++ + +G G+++K + G V +KK+ +H+ K + + E+ + ++
Sbjct: 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK 65
Query: 566 HARLVPLLGQCLEHETEKL-------LVYKYMVCGDLASSLH--RVTDLEDD----SLQS 612
H +VPL+ +E + +V YM DL+ L V E LQ
Sbjct: 66 HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYM-DHDLSGLLENPSVKLTESQIKCYMLQL 124
Query: 613 LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK 655
L EG++YLH N L HRD++A++IL+D++
Sbjct: 125 L-------------EGINYLH--ENHIL-HRDIKAANILIDNQ 151
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 4e-05
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 263 NLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNN 322
NL L +S N L + +G F L L+V+DLSGN L P P+LR LDLS NN
Sbjct: 1 NLKSLDLSNNRLTV-IPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 323 I 323
+
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 4e-05
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 191 NLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250
NL L+L++N T L +++ L+LS N LT P L L LDLS N++
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 4e-05
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
Query: 519 LIKK---GHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQ 575
L+KK G G+++ G G T V +K + S E+++ E +L ++ H RLV L
Sbjct: 10 LVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAV 69
Query: 576 CLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHE 635
+ ++ +YM G L V L+ L + +A AEG++++ +
Sbjct: 70 VTQEPI--YIITEYMENGSL------VDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK 121
Query: 636 CNPPLVHRDVQASSILLDD 654
+HRD++A++IL+ +
Sbjct: 122 ---NYIHRDLRAANILVSE 137
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 5e-05
Identities = 77/207 (37%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 142 SRLNVLYLSGNSLAGNV-PATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200
+N L L+ +S + P++L L L L S N ++LL L L+L N
Sbjct: 45 VAVNRLALNLSSNTLLLLPSSLSRLLSLDLLSPSGISSLDGSENLLNLL-PLPSLDLNLN 103
Query: 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLD-KLIELDLSKNSISGSLPLELR 259
I S L L+++ L+L +N +T IP +G L L ELDLS N I SLP LR
Sbjct: 104 RLRSNI-SELLELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLR 160
Query: 260 GLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLS 319
L NL L +S N L L + L L L +DLSGNK+ LP + L L LDLS
Sbjct: 161 NLPNLKNLDLSFNDLS-DLPKLLS-NLSNLNNLDLSGNKI-SDLPPEIELLSALEELDLS 217
Query: 320 RNNITGSWPILSTNGNASGAVFNISNN 346
N+I LS N SG +SNN
Sbjct: 218 NNSIIELLSSLSNLKNLSG--LELSNN 242
|
Length = 394 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 5e-05
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 12/147 (8%)
Query: 520 IKKGHSGDLFKGTLAGGTT---VVVKKVSLHSFKKE--SYMMELDLFSRVSHARLVPLLG 574
I G G + G G + VVVK++ + E ++ E+ + ++H ++ LG
Sbjct: 3 IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62
Query: 575 QCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH 634
QC+E LLV ++ GDL + L + Q ++A A GL +LH
Sbjct: 63 QCIE-SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKD---VLQRMACEVASGLLWLHQ 118
Query: 635 ECNPPLVHRDVQASSILLDDKFEVRLG 661
+H D+ + L V++G
Sbjct: 119 A---DFIHSDLALRNCQLTADLSVKIG 142
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 6e-05
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 17/149 (11%)
Query: 522 KGHSGDLFKGTLAGGTTVVVK------KVSLHSFKK-ESYMMELDLFSRVSHARLVPLLG 574
+G G + +G L+ +K K+ +H++ + E ++ E H ++ L+G
Sbjct: 9 EGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIG 68
Query: 575 QCLEHETEK-----LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGL 629
C E + + +++ +M GDL S L + L + L T LK + A G+
Sbjct: 69 VCFEASSLQKIPKPMVILPFMKHGDLHSFLLY-SRLGGLP-EKLPLQTLLKFMVDIALGM 126
Query: 630 SYLHHECNPPLVHRDVQASSILLDDKFEV 658
YL N +HRD+ A + +L + V
Sbjct: 127 EYL---SNRNFIHRDLAARNCMLREDMTV 152
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 7e-05
Identities = 24/60 (40%), Positives = 30/60 (50%)
Query: 167 KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNAL 226
L +LDLS N LT A L NL L+L+ N T P L S++ L+LS N L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 7e-05
Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 21/158 (13%)
Query: 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHA 567
E + + +G G + K L + K +K+ + EL++
Sbjct: 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQ-ILRELEINKSCKSP 59
Query: 568 RLVPLLGQCL-EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITR----LKIA 622
+V G L E + + +Y G L S +V + KIA
Sbjct: 60 YIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKV--------KKRGGRIGEKVLGKIA 111
Query: 623 IGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660
+GLSYLH ++HRD++ S+ILL K +V+L
Sbjct: 112 ESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKL 146
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 9e-05
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 522 KGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581
+G G+++ GT G T V +K + + E+++ E + ++ H +LVPL + E
Sbjct: 16 QGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYA--VVSEE 73
Query: 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLV 641
+V ++M G L L E D + L + +A A+G++Y+ +
Sbjct: 74 PIYIVTEFMGKGSLLDFLK-----EGDG-KYLKLPQLVDMAAQIADGMAYIERM---NYI 124
Query: 642 HRDVQASSILLDDKFEVRLGSL 663
HRD++A++IL+ D ++
Sbjct: 125 HRDLRAANILVGDNLVCKIADF 146
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 9e-05
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 23/107 (21%)
Query: 549 FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL-LVYKYMVCGDLASSLHRVTDLED 607
E+Y+M + V H +V LLG CL + ++ L+ + M G L + D
Sbjct: 56 ILDEAYVM-----ASVDHPHVVRLLGICL---SSQVQLITQLMPLGCLLDYVRNHKD-NI 106
Query: 608 DSLQSLDWITRLKIAIGAAEGLSYL--HHECNPPLVHRDVQASSILL 652
S L+W ++ A+G+SYL LVHRD+ A ++L+
Sbjct: 107 GSQYLLNWCVQI------AKGMSYLEEKR-----LVHRDLAARNVLV 142
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 1e-04
Identities = 38/185 (20%), Positives = 74/185 (40%), Gaps = 33/185 (17%)
Query: 500 DSFTYEQLLRATGNFSETNLIKKGHSGDLF--KGTLAGGTTVVVKKVSLHSFKKESY-MM 556
D F + +++ G+FS L K+ + + K ++ K L KK Y +
Sbjct: 1 DDFKFGKII-GEGSFSTVVLAKEKETNKEYAIK---------ILDKRQLIKEKKVKYVKI 50
Query: 557 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWI 616
E ++ +R++ + L + E V +Y G+L + + L++ + +
Sbjct: 51 EKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTR---FY 107
Query: 617 TRLKIAIGAAE---GLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQG 670
AE L YLH + ++HRD++ +ILLD +++ G+ L
Sbjct: 108 A--------AEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156
Query: 671 DSHQN 675
N
Sbjct: 157 SPESN 161
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 1e-04
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 522 KGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581
+G G+++ GT G T V +K + + E+++ E + ++ H +LV L + E
Sbjct: 16 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA--VVSEE 73
Query: 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLV 641
+V +YM G L L Q +D ++ + E ++Y V
Sbjct: 74 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---------V 124
Query: 642 HRDVQASSILLDDKF 656
HRD++A++IL+ +
Sbjct: 125 HRDLRAANILVGENL 139
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 1e-04
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVP 571
G+F E ++++ +GD++ V+KK L + + S+ E +S++ +P
Sbjct: 12 GHFGEVQVVREKATGDIY-------AMKVMKKSVLLAQETVSFFEEERDILSISNSPWIP 64
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
L + + LV +Y GDL S L+R D D+ + ++ L +AI + + Y
Sbjct: 65 QLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQF-YLAELVLAIHSVHQMGY 123
Query: 632 LHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQG 670
VHRD++ ++L+D ++L GS + L A
Sbjct: 124 ---------VHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 1e-04
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 514 FSETNLIKKGHSGDL-FKGTLAGGTTVVVKKVSLH----SFKKESYMMELDLFSRVSHAR 568
FS+ I G G + F + V +KK+S + K + + E+ ++ H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
+ G C E LV +Y L +DL + + L + + GA +G
Sbjct: 77 TIQYRG-CYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQG 127
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663
L+YLH + ++HRDV+A +ILL + V+LG
Sbjct: 128 LAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDF 159
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 26/179 (14%)
Query: 489 PKDPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVV-VKKVSLH 547
KDP I D F + F + I G G ++ T + VV VKK+S +
Sbjct: 5 VKDPEI----ADLFYKDDPEEI---FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMS-Y 56
Query: 548 SFKK-----ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRV 602
S K+ + + E+ ++ H + G C E LV +Y L
Sbjct: 57 SGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG-CYLKEHTAWLVMEY--------CLGSA 107
Query: 603 TDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
+DL + + L + I GA +GL+YLH ++HRD++A +ILL + +V+L
Sbjct: 108 SDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLA 163
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 39.4 bits (93), Expect = 2e-04
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 110 PEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSL 154
F LP L+VLDL +L+ P +F L L L LSGN+L
Sbjct: 17 DGAF-KGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 18/131 (13%)
Query: 536 GTTVVVKKVSLHSFKK-----ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590
V +KK+S +S K+ + + E+ ++ H + G C E LV +Y
Sbjct: 40 NEVVAIKKMS-YSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKG-CYLREHTAWLVMEY- 96
Query: 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSI 650
C AS + ++ LQ ++ I GA +GL+YLH +HRD++A +I
Sbjct: 97 -CLGSASD---ILEVHKKPLQEVEIAA---ICHGALQGLAYLHSHE---RIHRDIKAGNI 146
Query: 651 LLDDKFEVRLG 661
LL + V+L
Sbjct: 147 LLTEPGTVKLA 157
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 32/152 (21%), Positives = 60/152 (39%), Gaps = 18/152 (11%)
Query: 518 NLIKKGHSGDLFKGT---LAGGTT--VVVK--KVSLHSFKKESYMMELDLFSRVSHARLV 570
+ +GH G + L T V VK S + + E+++ + H +V
Sbjct: 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69
Query: 571 PLLGQCLE-HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGL 629
G C + L+ +Y+ G L L R D ++ L + +G+
Sbjct: 70 KYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD-------QINLKRLLLFSSQICKGM 122
Query: 630 SYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
YL + +HRD+ A +IL++ + V++
Sbjct: 123 DYLG---SQRYIHRDLAARNILVESEDLVKIS 151
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 2e-04
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 557 ELDLFSRVSHARLVPLLGQCLEHETEKLLVY-KYMVCGDLASSLHRVTDLEDDSLQSLDW 615
E+ L + H R+V G + E +KL ++ +YM G + L L ++
Sbjct: 54 EIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTEN------- 106
Query: 616 ITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
+TR + +G+SYLH +VHRD++ ++IL D V+LG
Sbjct: 107 VTR-RYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLG 148
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 2e-04
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 557 ELDLFSRVSHARLVPLLGQCLEHETEKLLV--YKYMVCGDLASSLHRVTDLEDDSLQSLD 614
E+ L + H R+V G CL EK L +YM G + L L +
Sbjct: 54 EIQLLKNLQHERIVQYYG-CLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTES------ 106
Query: 615 WITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663
+TR K EG+SYLH +VHRD++ ++IL D V+LG
Sbjct: 107 -VTR-KYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDF 150
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 506 QLLRATGNFSETNLIKKGHSGDLFKGTLAGGTT------VVVKKV-SLHSFKKES-YMME 557
LLRA G G G++++G G V VK + S + ES ++ME
Sbjct: 9 TLLRALG---------HGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLME 59
Query: 558 LDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLH--RVTDLEDDSLQSLDW 615
+ S+ +H +V L+G E + ++ + M GDL S L R SL D
Sbjct: 60 ALIMSKFNHQNIVRLIGVSFE-RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDL 118
Query: 616 ITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652
+ A A+G YL E N +HRD+ A + LL
Sbjct: 119 L---FCARDVAKGCKYL--EEN-HFIHRDIAARNCLL 149
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Query: 520 IKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEH 579
I +G G + +G G V VK + ++++ E + +++ H LV LLG L +
Sbjct: 14 IGEGEFGAVLQGEYTG-QKVAVKNIKC-DVTAQAFLEETAVMTKLHHKNLVRLLGVILHN 71
Query: 580 ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPP 639
+V + M G+L V L + I L+ ++ AEG+ YL +
Sbjct: 72 GLY--IVMELMSKGNL------VNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---K 120
Query: 640 LVHRDVQASSILLDD 654
LVHRD+ A +IL+ +
Sbjct: 121 LVHRDLAARNILVSE 135
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 2e-04
Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 31/138 (22%)
Query: 536 GTTVVVKKVSLHSFKKE---SYMMELDLFSRVSHARLVPLLGQCLEHETEKL-LVYKYMV 591
G V +KK+ + + K+ + + E+ L ++ H +V L + +V++YM
Sbjct: 24 GELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD 83
Query: 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAA--------EGLSYLHHECNPPLVHR 643
DL L +K EGL YLH ++HR
Sbjct: 84 -HDLTGLLDS---------------PEVKFTESQIKCYMKQLLEGLQYLHS-NG--ILHR 124
Query: 644 DVQASSILLDDKFEVRLG 661
D++ S+IL+++ ++L
Sbjct: 125 DIKGSNILINNDGVLKLA 142
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 26/163 (15%)
Query: 508 LRATGNFSETNLIKKGHSGDLFKG-TLAGGTTVVVKKVSLHSFKKE---SYMMELDLFSR 563
R+ F + N I +G G +++ G V +KKV + + + S + E+ L
Sbjct: 3 CRSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLN 62
Query: 564 VSHARLVPLL----GQCLEHETEKLLVYKYMVC-GDLASSLHRVTDLEDDSLQSLDWITR 618
+ H +V L G+ L+ LV +Y C DLAS L D++ + ++
Sbjct: 63 LRHPNIVELKEVVVGKHLD---SIFLVMEY--CEQDLASLL--------DNMPTPFSESQ 109
Query: 619 LK-IAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660
+K + + GL YLH ++HRD++ S++LL DK +++
Sbjct: 110 VKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKI 149
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 2e-04
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKK-----ESYMMELDLFSRVSHAR 568
F++ I G G ++ VV K +S K+ + + E+ R+ H
Sbjct: 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
+ G C E LV +Y L +DL + + L + I GA +G
Sbjct: 87 SIEYKG-CYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAITHGALQG 137
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663
L+YLH ++HRD++A +ILL + +V+L
Sbjct: 138 LAYLHSH---NMIHRDIKAGNILLTEPGQVKLADF 169
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 28/157 (17%)
Query: 522 KGHSGDLFKGT------LAGGTTVVVKKVSLHSFKKE--SYMMELDLFSRVSHARLVPLL 573
+G G + K T AG TTV VK + ++ E + E +L +V+H ++ L
Sbjct: 10 EGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLY 69
Query: 574 GQCLEHETEKLLVYKYMVCGDLASSL----------------HRVTDLEDDSLQSLDWIT 617
G C + LL+ +Y G L S L + L++ ++L
Sbjct: 70 GACSQDGP-LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGD 128
Query: 618 RLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD 654
+ A + G+ YL LVHRD+ A ++L+ +
Sbjct: 129 LISFAWQISRGMQYL---AEMKLVHRDLAARNVLVAE 162
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 3e-04
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 526 GDLFKGTLAGGTTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583
+++ T G VVVK K + S ++ ++ + D + + H ++ LGQC+E
Sbjct: 14 SEIYTDT--GVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-AIPY 70
Query: 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHR 643
LLV++Y GDL S L + +S + ++A A G++++H +H
Sbjct: 71 LLVFEYCELGDLKSYLSQEQWHRRNS----QLLLLQRMACEIAAGVTHMHKH---NFLHS 123
Query: 644 DVQASSILLDDKFEVRLG 661
D+ + L V++G
Sbjct: 124 DLALRNCFLTSDLTVKVG 141
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|185268 PRK15370, PRK15370, E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 3e-04
Identities = 68/240 (28%), Positives = 103/240 (42%), Gaps = 51/240 (21%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSF-GNLSRLNVLYLSGNSLAGNVPATL 162
++P IPE + L L + L S+P + GN+ L Y + N L ++PATL
Sbjct: 192 TIPACIPE-------QITTLILDNNELK-SLPENLQGNIKTL---YANSNQLT-SIPATL 239
Query: 163 GELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG---QIPSGLYSL------ 213
+ + ++LS N +T E+P L L L+L N + +P L L
Sbjct: 240 PD--TIQEMELSINRIT-ELPE--RLPSALQSLDLFHNKISCLPENLPEELRYLSVYDNS 294
Query: 214 ---------SSIQFLNLSDNALTGFIPSEVG-NLDKLIELDLSKNSISGSLPLELRGLRN 263
S I LN+ N+LT +P + L L + + S+ SLP EL+ L
Sbjct: 295 IRTLPAHLPSGITHLNVQSNSLT-ALPETLPPGLKTLEAGENALTSLPASLPPELQVLD- 352
Query: 264 LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNI 323
+S+N + L E L PT+ L V + L LPA L+ + SRNN+
Sbjct: 353 -----VSKNQIT-VLPETLPPTITTLDVSRNALTNLPENLPAA------LQIMQASRNNL 400
|
Length = 754 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 43.6 bits (101), Expect = 3e-04
Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 14/147 (9%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYM----MELDLFSRVSHAR 568
++ + +G G+++ V +K ++ K + E+ + + ++H
Sbjct: 1 SYRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
+ L + E LV +Y+ G L L + L L I
Sbjct: 59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLK-----KIGRKGPLSESEALFILAQILSA 113
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDK 655
L YLH + ++HRD++ +ILLD
Sbjct: 114 LEYLHSKG---IIHRDIKPENILLDRD 137
|
Length = 384 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 523 GHSGDLFKGTLAGGTTVVVKKVSLHS-FKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581
G+ G++++G V +K + K++ + E+ R+ H L+ L C E
Sbjct: 17 GYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEP 76
Query: 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLV 641
++ + M G L L + E Q L + + +A AEG++YL + +
Sbjct: 77 -VYIITELMEKGSL---LAFLRSPEG---QVLPVASLIDMACQVAEGMAYLEEQ---NSI 126
Query: 642 HRDVQASSILLDDKFEVRLG 661
HRD+ A +IL+ + ++
Sbjct: 127 HRDLAARNILVGEDLVCKVA 146
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 28/153 (18%)
Query: 520 IKKGHSGDLFKG-TLAGGTTVVVKKV-------SLHSFKKESYMMELDLFSRVSHARLVP 571
I G + ++ L V +K++ S+ +KE M S+ +H +V
Sbjct: 9 IGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAM-----SQCNHPNVVK 63
Query: 572 LLGQCLEHETEKLLVYKYMVCG---DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
+ E LV Y+ G D+ S + L++ + T LK +G
Sbjct: 64 YYTSFVV-GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAII-----ATVLK---EVLKG 114
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
L YLH +HRD++A +ILL + V++
Sbjct: 115 LEYLHSN---GQIHRDIKAGNILLGEDGSVKIA 144
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 4e-04
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 519 LIKKGHSGDLFKG-TLAGGTTVVVKKVSLHSFKKESYMM------ELDLFSRVSHARLVP 571
L+ G G +++G L G VK+VSL + E+ L S++ H +V
Sbjct: 7 LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ 66
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
LG E E + L ++ +V G + L + + + L TR + GL Y
Sbjct: 67 YLGT--EREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRL--YTRQILL-----GLEY 117
Query: 632 LHHECNPPLVHRDVQASSILLDDKFEVRL 660
LH + VHRD++ ++IL+D V+L
Sbjct: 118 LH---DRNTVHRDIKGANILVDTNGVVKL 143
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 36/164 (21%), Positives = 65/164 (39%), Gaps = 15/164 (9%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLV 570
+ +K + + V VK + +E ++ E+ + SR+S +
Sbjct: 26 ADGLQDFSEKAFAENDNAD---APVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIA 82
Query: 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDS---LQSLDWITRLKIAIGAAE 627
LLG C + ++ +YM GDL L + +SL + T L +A A
Sbjct: 83 RLLGVCT-VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIAS 141
Query: 628 GLSYLHHECNPPLVHRDVQASSILLDDKFEVR---LGSLSELHA 668
G+ YL N VHRD+ + L+ + ++ G L++
Sbjct: 142 GMRYL-ESLN--FVHRDLATRNCLVGKNYTIKIADFGMSRNLYS 182
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 5e-04
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 22/154 (14%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPL 572
++ + G G +F T G VV K+ +K + ++E L V+H ++ +
Sbjct: 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIG----QKGTTLIEAMLLQNVNHPSVIRM 122
Query: 573 LGQCLEHETEKLLVYKYMVCGDL---ASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGL 629
LV + C L +S L+ L + K + EGL
Sbjct: 123 K---------DTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQIL---EGL 170
Query: 630 SYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663
YLH + ++HRDV+ +I ++D +V +G L
Sbjct: 171 RYLHAQ---RIIHRDVKTENIFINDVDQVCIGDL 201
|
Length = 357 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 5e-04
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 536 GTTVVVKKVSLHSFKK-------ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588
GT + VK+V+ E+ E+ L +R++H ++ +LG ++ L +
Sbjct: 25 GTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLG-ATCEDSHFNLFVE 83
Query: 589 YMVCGDLASSLHRVTDLEDD-SLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQA 647
+M G ++ L + ++ + + + R GLSYLH ++HRDV+
Sbjct: 84 WMAGGSVSHLLSKYGAFKEAVIINYTEQLLR---------GLSYLHEN---QIIHRDVKG 131
Query: 648 SSILLD 653
+++L+D
Sbjct: 132 ANLLID 137
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 41.7 bits (99), Expect = 7e-04
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 37/161 (22%)
Query: 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHAR 568
G+F + L+++ G L+ V+K++ L + +E + E+ + +++H
Sbjct: 11 GSFGKVYLVRRKSDGKLY----------VLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60
Query: 569 LVPLLGQCLEHETEK---LLVYKYMVCGDLASSLHRVTDL-----EDDSLQSLDWITRLK 620
++ + E EK +V +Y GDL+ + + E+ Q LDW +L
Sbjct: 61 II----KYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEE---QILDWFVQL- 112
Query: 621 IAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
L YLH ++HRD++ +I L V+LG
Sbjct: 113 -----CLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLG 145
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 7e-04
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 522 KGHSGDLFKGTLAG-GTTVVVKK--VSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLE 578
+G SG ++K G +KK V ++ + EL +V G
Sbjct: 11 QGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYG-AFY 69
Query: 579 HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNP 638
E E +V +YM G LA L +V + + L IA +GL YLH + +
Sbjct: 70 KEGEISIVLEYMDGGSLADLLKKVGKIPEPVLA--------YIARQILKGLDYLHTKRH- 120
Query: 639 PLVHRDVQASSILLDDKFEVRL 660
++HRD++ S++L++ K EV++
Sbjct: 121 -IIHRDIKPSNLLINSKGEVKI 141
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 7e-04
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 26/161 (16%)
Query: 512 GNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHAR-L 569
G F ++ G G ++KG + G +K + + ++E +E+++ + SH R +
Sbjct: 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNI 75
Query: 570 VPLLGQCLE-----HETEKLLVYKYMVCGDLASSLHRVTDL----EDDSLQSLDWITRLK 620
G ++ H+ + LV ++ CG A S VTDL + ++L+ DWI +
Sbjct: 76 ATYYGAFIKKSPPGHDDQLWLVMEF--CG--AGS---VTDLVKNTKGNALKE-DWIAYIC 127
Query: 621 IAIGAAEGLSYLH-HECNPPLVHRDVQASSILLDDKFEVRL 660
I GL++LH H+ ++HRD++ ++LL + EV+L
Sbjct: 128 REI--LRGLAHLHAHK----VIHRDIKGQNVLLTENAEVKL 162
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 7e-04
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 522 KGHSGDLFKGTL-AGGTTVVVKKVSLHSFKK----ESYMMELDLFSRVSHARLVPLLGQC 576
KG G++ + A G KK++ KK E M+E + ++V H+R + L
Sbjct: 3 KGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYA 61
Query: 577 LEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC 636
+ +T+ LV M GDL ++ V D+ GL +LH
Sbjct: 62 FQTKTDLCLVMTIMNGGDLRYHIYNV----DEENPGFPEPRACFYTAQIISGLEHLHQR- 116
Query: 637 NPPLVHRDVQASSILLDDKFEVRLGSL 663
+++RD++ ++LLD+ VR+ L
Sbjct: 117 --RIIYRDLKPENVLLDNDGNVRISDL 141
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 8e-04
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 514 FSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPL 572
+ I +G SG+++K T A G V +KK+ L KE + E+ + H +V
Sbjct: 21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDY 80
Query: 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE---GL 629
E +V +YM G L TD+ + + +IA E GL
Sbjct: 81 YD-SYLVGDELWVVMEYMDGGSL-------TDIITQNFVRM---NEPQIAYVCREVLQGL 129
Query: 630 SYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
YLH + ++HRD+++ +ILL V+L
Sbjct: 130 EYLH---SQNVIHRDIKSDNILLSKDGSVKLA 158
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 37.1 bits (87), Expect = 0.001
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 215 SIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGL 274
+++ L+LS+N LT L L LDLS N+++ P GL +L L +S N L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.001
Identities = 34/165 (20%), Positives = 69/165 (41%), Gaps = 23/165 (13%)
Query: 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVP 571
G F E L++ +G ++ + + ++ + H E D+ + +V
Sbjct: 12 GAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAH------VRAERDILADADSPWIVK 65
Query: 572 LLGQCLEHETEKL-LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
L + E L LV +YM GDL + L R +++ + +I L +A+ + L
Sbjct: 66 L--YYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARF--YIAELVLALDSVHKLG 121
Query: 631 YLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDS 672
+ +HRD++ +IL+D ++L G +++ D
Sbjct: 122 F---------IHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR 157
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.001
Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
Query: 551 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLAS--SLHRVTDLEDD 608
+ ++ E+ + SR+ ++ LLG C++ E ++ +YM GDL S H + D E++
Sbjct: 63 RNDFLKEVKILSRLKDPNIIRLLGVCVD-EDPLCMITEYMENGDLNQFLSSHHLDDKEEN 121
Query: 609 S---------LQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659
L ++ + + L +A+ A G+ YL + VHRD+ + L+ + ++
Sbjct: 122 GNDAVPPAHCLPAISYSSLLHVALQIASGMKYL---SSLNFVHRDLATRNCLVGENLTIK 178
Query: 660 L 660
+
Sbjct: 179 I 179
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.002
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 11/141 (7%)
Query: 520 IKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEH 579
+ G G + G G V +K + + ++ ++ E + ++SH LV L G C +
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ 71
Query: 580 ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPP 639
+V +YM G L + L +W+ L + E + YL
Sbjct: 72 RP-IFIVTEYMANGCLLNYLRERKGKL-----GTEWL--LDMCSDVCEAMEYLESNG--- 120
Query: 640 LVHRDVQASSILLDDKFEVRL 660
+HRD+ A + L+ + V++
Sbjct: 121 FIHRDLAARNCLVGEDNVVKV 141
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 36/152 (23%), Positives = 76/152 (50%), Gaps = 14/152 (9%)
Query: 522 KGHSGDLFKGTLAG------GTTVVVKKVSLHSFKKE--SYMMELDLFSRVSHARLVPLL 573
+G G +++G G T V +K V+ + +E ++ E + + +V LL
Sbjct: 16 QGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 75
Query: 574 GQCLEHETEKLLVYKYMVCGDLASSLHRV-TDLEDDSLQSLDWITRL-KIAIGAAEGLSY 631
G + L++ + M GDL S L + ++E++ +Q+ + ++ ++A A+G++Y
Sbjct: 76 G-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAY 134
Query: 632 LHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663
L+ VHRD+ A + ++ + F V++G
Sbjct: 135 LNAN---KFVHRDLAARNCMVAEDFTVKIGDF 163
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 518 NLIKKGHSGDLFKGTLAGGTT----VVVKKVSLHSF---KKESYMMELDLFSRVSHARLV 570
+IKK G K LA + V+K++ L +KE+ E+ L +++ H +V
Sbjct: 3 EIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIV 62
Query: 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
+ +V +Y GDL ++R + Q L W ++ + GL
Sbjct: 63 TFFAS-FQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISL------GLK 115
Query: 631 YLHHECNPPLVHRDVQASSILL 652
++H + ++HRD+++ +I L
Sbjct: 116 HIH---DRKILHRDIKSQNIFL 134
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.002
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 519 LIKK---GHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQ 575
L++K G G++++G T V VK + + + ++ E + ++ H +L+ L
Sbjct: 10 LLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAV 69
Query: 576 CLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHE 635
C E +V + M G L L + ++L + +A A G++YL +
Sbjct: 70 CTLEEP-IYIVTELMKYGSLLEYLQG------GAGRALKLPQLIDMAAQVASGMAYLEAQ 122
Query: 636 CNPPLVHRDVQASSILLDD 654
+HRD+ A ++L+ +
Sbjct: 123 ---NYIHRDLAARNVLVGE 138
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.002
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 30/155 (19%)
Query: 518 NLIKKGHSGDLFKG-TLAGGTTVVVKKVSLHSFKKESYMM---ELDLFSRVSHARLVPLL 573
N I G G ++ L G + VK++ + ++ E+ + + H LV
Sbjct: 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65
Query: 574 GQCLEHETEKLLVY-KYMVCGDLASSLHRVTDLEDD------SLQSLDWITRLKIAIGAA 626
G +E EK+ ++ +Y G L L + D+ +LQ L
Sbjct: 66 G--VEVHREKVYIFMEYCSGGTLEELLEH-GRILDEHVIRVYTLQLL------------- 109
Query: 627 EGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
EGL+YLH +VHRD++ ++I LD ++LG
Sbjct: 110 EGLAYLH-SHG--IVHRDIKPANIFLDHNGVIKLG 141
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 30/159 (18%)
Query: 526 GDLFKGTLAGGT------TVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCL 577
G ++KG L G V +K K +E + E + SR+ H +V LLG +
Sbjct: 19 GKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLG-VV 77
Query: 578 EHETEKLLVYKYMVCGDLASSL------HRVTDLEDD-----SLQSLDWITRLKIAIGAA 626
E +++ Y DL L V +DD +L+ D+ + I A
Sbjct: 78 TKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADF---VHIVTQIA 134
Query: 627 EGLSYL--HHECNPPLVHRDVQASSILLDDKFEVRLGSL 663
G+ +L HH +VH+D+ ++L+ DK V++ L
Sbjct: 135 AGMEFLSSHH-----VVHKDLATRNVLVFDKLNVKISDL 168
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 40.1 bits (93), Expect = 0.002
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 512 GNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHAR-L 569
G F L+ G G ++KG + G +K + + ++E E+++ + SH R +
Sbjct: 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNI 65
Query: 570 VPLLGQCLEHETEKLLVYKYMV---CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAA 626
G ++ + ++V CG S + + + ++L+ +WI + I
Sbjct: 66 ATYYGAFIKKNPPGMDDQLWLVMEFCG-AGSVTDLIKNTKGNTLKE-EWIAYICREI--L 121
Query: 627 EGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660
GLS+LH ++HRD++ ++LL + EV+L
Sbjct: 122 RGLSHLHQH---KVIHRDIKGQNVLLTENAEVKL 152
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 16/149 (10%)
Query: 520 IKKGHSGDLFKGTLAGG---TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLG 574
I G G + G + G VVVK +VS ++ ++ E + + H+ L+ LG
Sbjct: 3 IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLG 62
Query: 575 QCLEHETEKLLVYKYMVCGDLASSLH--RVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL 632
QC E T LLV ++ GDL L R + L + D T ++A A GL +L
Sbjct: 63 QCTE-VTPYLLVMEFCPLGDLKGYLRSCRKAE-----LMTPDPTTLQRMACEIALGLLHL 116
Query: 633 HHECNPPLVHRDVQASSILLDDKFEVRLG 661
H +H D+ + LL V++G
Sbjct: 117 HKN---NFIHSDLALRNCLLTADLTVKIG 142
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.004
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 26/147 (17%)
Query: 512 GNFSETNLIKKGHSGDLF--KGTLAGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHAR 568
G + L KK +GD++ K V+KK + + + + E D+ S+
Sbjct: 4 GAYGRVFLAKKKSTGDIYAIK---------VIKKADMIRKNQVDQVLTERDILSQAQSPY 54
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIA-IGAAE 627
+V L + + LV +Y+ GDLAS L V L++D + R+ IA I A
Sbjct: 55 VVKLY-YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDED-------VARIYIAEIVLA- 105
Query: 628 GLSYLHHECNPPLVHRDVQASSILLDD 654
L YL H ++HRD++ +IL+D
Sbjct: 106 -LEYL-HSNG--IIHRDLKPDNILIDS 128
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.0 bits (92), Expect = 0.004
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 32/150 (21%)
Query: 512 GNFSETNLIKKGHSGDLF--KGTLAGGTTVVVKKVSLHSFKKESYMM-ELDLFSRVSHAR 568
G+F + L++K +G L+ K V+KK + K+ + + E ++ SR++H
Sbjct: 4 GSFGKVLLVRKKDTGKLYAMK---------VLKKKKIIKRKEVEHTLTERNILSRINHPF 54
Query: 569 LVPLLGQCLEHETEKL-LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE 627
+V L EKL LV +Y G+L S L + S + AAE
Sbjct: 55 IVKLH--YAFQTEEKLYLVLEYAPGGELFSHLSKEGRF------SEERARFY-----AAE 101
Query: 628 ---GLSYLHHECNPPLVHRDVQASSILLDD 654
L YLH +++RD++ +ILLD
Sbjct: 102 IVLALEYLH-SLG--IIYRDLKPENILLDA 128
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.004
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 21/153 (13%)
Query: 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVK--KVSLHSFKKESYMMELDLFSRVSHARL 569
G+F + +L + D GT G V VK K + E+++ + H +
Sbjct: 15 GHFGKVSLYCYDPAND---GT---GEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENI 68
Query: 570 VPLLGQCLEH-ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
V G C E L+ +Y+ G L L + L+ L A EG
Sbjct: 69 VKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK---------HKLNLAQLLLFAQQICEG 119
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
++YLH + +HRD+ A ++LLD+ V++G
Sbjct: 120 MAYLHSQ---HYIHRDLAARNVLLDNDRLVKIG 149
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.004
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 520 IKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKE--SYMMELDLFSRVSHARLVPLLGQCL 577
I KGH L+ + V +K + + ++ + E L + + H +V LLG +
Sbjct: 21 IYKGH---LYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLG-VV 76
Query: 578 EHETEKLLVYKYMVCGDLASSL-----HR---VTDLEDDSLQS-LDWITRLKIAIGAAEG 628
E ++++Y+ GDL L H + ED +++S LD L IAI A G
Sbjct: 77 TQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAG 136
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663
+ YL VH+D+ A +IL+ ++ V++ L
Sbjct: 137 MEYLSSHF---FVHKDLAARNILIGEQLHVKISDL 168
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.004
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 557 ELDLFSRVSHARLVPLLGQCLEHETEKLL--VYKYMVCGDLASSLHRVTDLEDDSLQSLD 614
E+ L + H R+V G CL E+ L ++M G + L L ++
Sbjct: 54 EIQLLKNLLHERIVQYYG-CLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTEN------ 106
Query: 615 WITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
+TR K EG+SYLH +VHRD++ ++IL D V+LG
Sbjct: 107 -VTR-KYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLG 148
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 693 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.97 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 99.97 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.97 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.97 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.96 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.96 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.96 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.96 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.96 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.96 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.96 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.96 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.96 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.96 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.96 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.95 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.95 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.95 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.94 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.94 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.94 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.94 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.94 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.94 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.94 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.93 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.93 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.93 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.93 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.93 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.93 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.93 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.93 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.93 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.93 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.92 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.92 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.92 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.92 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.92 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.92 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.92 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.92 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.92 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.92 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.92 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.92 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.92 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.92 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.92 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.92 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.92 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.92 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.92 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.92 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.92 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.91 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.91 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.91 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.91 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.91 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.91 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.91 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.91 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.91 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.91 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.91 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.91 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.91 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.91 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.91 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.91 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.91 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.91 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.91 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.91 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.91 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.91 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.91 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.91 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.91 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.91 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.91 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.91 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.91 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.91 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.91 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.9 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.9 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.9 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.9 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.9 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.9 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.9 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.9 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.9 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.9 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.9 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.9 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.9 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.9 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.9 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.9 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.9 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.9 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.9 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.9 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.9 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.9 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.9 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.9 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.9 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.9 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.9 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.9 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.9 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.9 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.9 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.9 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.9 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.9 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.9 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.9 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.9 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.9 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.89 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.89 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.89 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.89 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.89 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.89 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.89 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.89 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.89 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.89 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.89 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.89 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.89 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.89 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.89 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.89 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.89 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.89 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.89 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.89 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.89 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.89 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.89 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.89 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.89 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.89 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.89 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.89 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.89 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.88 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.88 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.88 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.88 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.88 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.88 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.88 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.88 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.88 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.88 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.88 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.88 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.88 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.88 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.88 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.88 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.88 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.88 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.88 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.88 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.88 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.88 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.88 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.88 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.88 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.88 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.88 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.88 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.87 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.87 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.87 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.87 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.87 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.87 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.87 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.87 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.87 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.87 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.87 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.87 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.87 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.87 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.87 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.87 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.87 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.87 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.87 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.87 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.87 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.87 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.87 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.87 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.87 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.87 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.87 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.87 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.87 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.87 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.87 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.87 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.87 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.87 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.87 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.87 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.87 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.87 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.86 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.86 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.86 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.86 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.86 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.86 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.86 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.86 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.86 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.86 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.86 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.86 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.86 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.86 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.86 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.86 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.86 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.86 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.86 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.86 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.86 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.86 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.86 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.86 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.86 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.86 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.86 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.86 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.86 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.85 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.85 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.85 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.85 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.85 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.85 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.85 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.85 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.85 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.85 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.85 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.85 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.85 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.85 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.85 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.85 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.85 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.85 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.85 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.85 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.85 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.85 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.85 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.85 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.85 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.85 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.85 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.84 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.84 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.84 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.84 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.84 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.84 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.84 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.84 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.84 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.84 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.84 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.84 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.84 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.84 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.84 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.83 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.83 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.83 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.83 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.83 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.83 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.83 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.83 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.83 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.83 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.83 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.83 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.82 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.82 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.82 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.82 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.82 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.82 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.82 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.82 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.82 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.81 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.81 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.81 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.81 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.81 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.81 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.81 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.81 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.8 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.8 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.8 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.8 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.79 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.78 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.78 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.78 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.77 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.77 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.77 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.77 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.77 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.77 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.75 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.75 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.75 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.75 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.74 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.74 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.74 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.74 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.73 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.73 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.73 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.72 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.72 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.72 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.71 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.71 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.7 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.7 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.7 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.69 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.69 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.69 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.68 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.65 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.65 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.65 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.62 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.62 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.62 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.61 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.6 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.58 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.57 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.54 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.52 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.52 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.47 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.46 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.44 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.35 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.34 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.34 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.3 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.3 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.29 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.28 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.27 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.27 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.24 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.19 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.13 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.1 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.01 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 98.95 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.93 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.93 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 98.92 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 98.92 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.92 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.91 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.89 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.89 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.86 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.85 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.84 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.77 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.77 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.73 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.71 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.7 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 98.68 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.67 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.66 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.64 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 98.57 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 98.57 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 98.55 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.5 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 98.45 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.44 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.44 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.33 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.33 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.2 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.19 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.14 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.14 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 98.13 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 98.12 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.12 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.09 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 98.05 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.04 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.04 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.04 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-71 Score=667.79 Aligned_cols=606 Identities=31% Similarity=0.480 Sum_probs=341.1
Q ss_pred CHHHHHHHHHHHHhCCCC---CCCCCCCCCCCCCCcceeec-CCCEeEEEcCCCCcccccccCCccC-------------
Q 035786 23 SAVQRSALLDLRSSLGLR---SRDWPLRTEPCRSWRGVQCQ-NGQVIAINISGFKRTRIGRLNPRFA------------- 85 (693)
Q Consensus 23 ~~~~~~aLl~~k~~l~~~---~~~W~~~~~~C~~W~gv~C~-~~~v~~l~l~~~~~~~~g~~~~~~~------------- 85 (693)
.++|++||++||+++.++ ..+|+...+ ||.|.||+|+ .++|+.|+|++... .|.+++.+.
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~-~c~w~gv~c~~~~~v~~L~L~~~~i--~~~~~~~~~~l~~L~~L~Ls~n 103 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSSAD-VCLWQGITCNNSSRVVSIDLSGKNI--SGKISSAIFRLPYIQTINLSNN 103 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCCCC-CCcCcceecCCCCcEEEEEecCCCc--cccCChHHhCCCCCCEEECCCC
Confidence 458999999999999642 468975555 6699999997 57999999987532 233322100
Q ss_pred ------ccc-cccCCCCCEEEccCCCCCC----------------------cCchHhhhCCCCccEEEecCCCCCcCCCc
Q 035786 86 ------VDS-LGNLTLLSSFNASGLSLPG----------------------SIPEWFGYRLPALQVLDLRSCSLSGSIPG 136 (693)
Q Consensus 86 ------~~~-l~~L~~L~~L~ls~~~l~g----------------------~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~ 136 (693)
+.. +..+++|++|++++|.+.| .+|..++. +++|++|+|++|.+.+.+|.
T Consensus 104 ~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~-l~~L~~L~L~~n~l~~~~p~ 182 (968)
T PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGS-FSSLKVLDLGGNVLVGKIPN 182 (968)
T ss_pred ccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhc-CCCCCEEECccCcccccCCh
Confidence 001 1133333333333333333 33333332 44444444444444444444
Q ss_pred ccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCC
Q 035786 137 SFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSI 216 (693)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 216 (693)
.|+++++|++|+|++|.+.+.+|..++++++|++|+|++|.+++.+|..++.+++|++|++++|.+++.+|..++++++|
T Consensus 183 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 262 (968)
T PLN00113 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNL 262 (968)
T ss_pred hhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCC
Confidence 44444444444444444444444444444444444444444444444444444444444444444444444444445555
Q ss_pred CEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccC
Q 035786 217 QFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSG 296 (693)
Q Consensus 217 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~ 296 (693)
+.|++++|++++.+|..+.++++|++|++++|.+++.+|..+.++++|++|++++|.+++.+|.. +..+++|+.|++++
T Consensus 263 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~-~~~l~~L~~L~L~~ 341 (968)
T PLN00113 263 QYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVA-LTSLPRLQVLQLWS 341 (968)
T ss_pred CEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChh-HhcCCCCCEEECcC
Confidence 55555555555555555555555555555555555555555555555555555555555555543 35677777777777
Q ss_pred CcCCCcCcccccCCCCCCEEEccCCcCcccCCccC---------------------------------------------
Q 035786 297 NKLDGALPATLFLRPNLRFLDLSRNNITGSWPILS--------------------------------------------- 331 (693)
Q Consensus 297 N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~--------------------------------------------- 331 (693)
|.+++.+|..+..+++|+.|++++|+++|.+|...
T Consensus 342 n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p 421 (968)
T PLN00113 342 NKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELP 421 (968)
T ss_pred CCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECC
Confidence 77776666655555555555555544443322100
Q ss_pred -------------------------------------------------------------------------cCCCCCC
Q 035786 332 -------------------------------------------------------------------------TNGNASG 338 (693)
Q Consensus 332 -------------------------------------------------------------------------~~~~~~l 338 (693)
+..+..|
T Consensus 422 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L 501 (968)
T PLN00113 422 SEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSEL 501 (968)
T ss_pred hhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhcc
Confidence 0011122
Q ss_pred cEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCCcC-----cccccCCCcCCCCccCC-----Cc-----ccc
Q 035786 339 AVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADDRG-----RNVSLGRNCLQSVASQR-----SS-----EDC 401 (693)
Q Consensus 339 ~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~-----~~~~l~~n~l~g~~~~~-----~~-----~~~ 401 (693)
+.|++++|++.|.+|. ..+++|+.|+|++|.++|.+|..+. +.+++++|.+.|..+.. .+ ..|
T Consensus 502 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N 581 (968)
T PLN00113 502 MQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHN 581 (968)
T ss_pred CEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCC
Confidence 3333333333344443 3456788899999999999887654 35677888887754321 00 000
Q ss_pred h-----------------hhcccCCccccCCCCCCCCCCCCCCCccCCcceeeeeehhhHhHHHHHHHHHHHHHHHhhhc
Q 035786 402 R-----------------LFYAERGLTFDNFGVLEPMQPPVPQHEEKSSKRWIFILVGVFGGLGFIAILVIVLVLILRRC 464 (693)
Q Consensus 402 ~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (693)
. .+.++..+|... +....+++.. ......+..+++++++++++++++ +++++++++
T Consensus 582 ~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~---~~~~~~~c~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~- 654 (968)
T PLN00113 582 HLHGSLPSTGAFLAINASAVAGNIDLCGGD---TTSGLPPCKR--VRKTPSWWFYITCTLGAFLVLALV-AFGFVFIRG- 654 (968)
T ss_pred cceeeCCCcchhcccChhhhcCCccccCCc---cccCCCCCcc--ccccceeeeehhHHHHHHHHHHHH-HHHHHHHHh-
Confidence 0 000011111000 0001111111 111222333333333333222222 222222222
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCCccc-CCCCccCHHHHHHHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEE
Q 035786 465 DKGIANQRGSANVGPVPEGHSTPPPKDPAIVS-GVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVK 542 (693)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK 542 (693)
+++...++.....+ . +. ...+. .....++++++.. .+...++||+|+||.||+|+. .+|..||||
T Consensus 655 ~~~~~~~~~~~~~~-----~----~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK 721 (968)
T PLN00113 655 RNNLELKRVENEDG-----T----WE-LQFFDSKVSKSITINDILS---SLKEENVISRGKKGASYKGKSIKNGMQFVVK 721 (968)
T ss_pred hhcccccccccccc-----c----cc-ccccccccchhhhHHHHHh---hCCcccEEccCCCeeEEEEEECCCCcEEEEE
Confidence 21111111000000 0 00 00011 1112355666544 477889999999999999997 578999999
Q ss_pred EecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHH
Q 035786 543 KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIA 622 (693)
Q Consensus 543 ~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia 622 (693)
++...... ..+|++.+++++|||||+++|+|.+ ++..++|||||++|+|.++++. ++|.++.+||
T Consensus 722 ~~~~~~~~---~~~~~~~l~~l~HpnIv~~~~~~~~-~~~~~lv~Ey~~~g~L~~~l~~-----------l~~~~~~~i~ 786 (968)
T PLN00113 722 EINDVNSI---PSSEIADMGKLQHPNIVKLIGLCRS-EKGAYLIHEYIEGKNLSEVLRN-----------LSWERRRKIA 786 (968)
T ss_pred EccCCccc---cHHHHHHHhhCCCCCcceEEEEEEc-CCCCEEEEeCCCCCcHHHHHhc-----------CCHHHHHHHH
Confidence 98643322 2356889999999999999999976 4678999999999999999952 8999999999
Q ss_pred HHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 623 IGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 623 ~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
.|+|+||+|||+.+.++|+||||||+||++|.++++++. ||.++..
T Consensus 787 ~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~ 832 (968)
T PLN00113 787 IGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLL 832 (968)
T ss_pred HHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccc
Confidence 999999999999888999999999999999999999885 7766554
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=377.15 Aligned_cols=166 Identities=46% Similarity=0.835 Sum_probs=153.3
Q ss_pred CccCHHHHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEc
Q 035786 500 DSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLE 578 (693)
Q Consensus 500 ~~~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~ 578 (693)
..|++.++.+||++|+..++||+|+||.||||.+++|+.||||++.....+ .++|.+|++++++++|||+|+|+|||.+
T Consensus 63 ~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e 142 (361)
T KOG1187|consen 63 RSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLE 142 (361)
T ss_pred ceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEec
Confidence 569999999999999999999999999999999999999999999876665 6679999999999999999999999997
Q ss_pred CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 579 HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 579 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
.+.+.+||||||+||+|+++|+.... ..|+|.+|++||.|+|+||+|||+.|.|+||||||||+|||||++++|
T Consensus 143 ~~~~~~LVYEym~nGsL~d~L~~~~~------~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 143 GGEHRLLVYEYMPNGSLEDHLHGKKG------EPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred CCceEEEEEEccCCCCHHHHhCCCCC------CCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 53358999999999999999997442 168999999999999999999999999999999999999999999999
Q ss_pred EECCcccccccCC
Q 035786 659 RLGSLSELHAQGD 671 (693)
Q Consensus 659 ki~Dfgla~~~~~ 671 (693)
||+|||+|+....
T Consensus 217 KlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 217 KLSDFGLAKLGPE 229 (361)
T ss_pred EccCccCcccCCc
Confidence 9999999988643
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=347.11 Aligned_cols=320 Identities=33% Similarity=0.479 Sum_probs=263.2
Q ss_pred CEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCc
Q 035786 63 QVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLS 142 (693)
Q Consensus 63 ~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~ 142 (693)
++..+++++... .|.++. .+.++++|+.|++++|.+.+.+|..+. .+++|++|++++|.+++.+|..+++++
T Consensus 261 ~L~~L~L~~n~l--~~~~p~-----~l~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~l~~n~~~~~~~~~~~~l~ 332 (968)
T PLN00113 261 NLQYLFLYQNKL--SGPIPP-----SIFSLQKLISLDLSDNSLSGEIPELVI-QLQNLEILHLFSNNFTGKIPVALTSLP 332 (968)
T ss_pred CCCEEECcCCee--eccCch-----hHhhccCcCEEECcCCeeccCCChhHc-CCCCCcEEECCCCccCCcCChhHhcCC
Confidence 456667765432 244433 677888999999999999999998886 489999999999999999999999999
Q ss_pred cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEcc
Q 035786 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLS 222 (693)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 222 (693)
+|+.|+|++|.+.+.+|..++.+++|+.|+|++|.+++.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|+++
T Consensus 333 ~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~ 412 (968)
T PLN00113 333 RLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQ 412 (968)
T ss_pred CCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECc
Confidence 99999999999998899889999999999999999998899888888899999999999988888888888999999999
Q ss_pred CCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCc
Q 035786 223 DNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGA 302 (693)
Q Consensus 223 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~ 302 (693)
+|++++.+|..+.++++|+.|++++|.+++.+|..+..+++|+.|++++|++.+.+|... ..++|+.|++++|++++.
T Consensus 413 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~--~~~~L~~L~ls~n~l~~~ 490 (968)
T PLN00113 413 DNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF--GSKRLENLDLSRNQFSGA 490 (968)
T ss_pred CCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc--ccccceEEECcCCccCCc
Confidence 999988888888888999999999999988888888888888888888888888777643 456788888888888888
Q ss_pred CcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCCcC-
Q 035786 303 LPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADDRG- 379 (693)
Q Consensus 303 ~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~- 379 (693)
+|..+..+++|+.|+|++|+++|.+|. .+..+.+|+.|++++|.++|.+|. ..+++|+.|||++|+++|.+|..+.
T Consensus 491 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 569 (968)
T PLN00113 491 VPRKLGSLSELMQLKLSENKLSGEIPD-ELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGN 569 (968)
T ss_pred cChhhhhhhccCEEECcCCcceeeCCh-HHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhc
Confidence 888888888888888888888888774 456677788888888888887775 5667788888888888888877654
Q ss_pred ----cccccCCCcCCCCc
Q 035786 380 ----RNVSLGRNCLQSVA 393 (693)
Q Consensus 380 ----~~~~l~~n~l~g~~ 393 (693)
..+++++|.+.|..
T Consensus 570 l~~L~~l~ls~N~l~~~~ 587 (968)
T PLN00113 570 VESLVQVNISHNHLHGSL 587 (968)
T ss_pred CcccCEEeccCCcceeeC
Confidence 35677777777644
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=280.92 Aligned_cols=163 Identities=22% Similarity=0.342 Sum_probs=141.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.+|...+.||+|+||+||||+.+ ++..||||.+.+.... ++-...|+++|++++|||||.++.++.+ ++..+|||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~-~~~i~lVM 88 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED-DDFIYLVM 88 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec-CCeEEEEE
Confidence 34666677999999999999974 5899999999765422 5567889999999999999999998875 57899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC------CceEEC
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK------FEVRLG 661 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~------~~~ki~ 661 (693)
|||.+|||.+||++.+ .++..+...+..|+|.||++||++ .||||||||.||||+.. -..||+
T Consensus 89 EyC~gGDLs~yi~~~~--------~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIA 157 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG--------RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIA 157 (429)
T ss_pred EeCCCCCHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEec
Confidence 9999999999999754 488999999999999999999999 99999999999999875 458999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+||......- ....||+|.|||
T Consensus 158 DFGfAR~L~~~~~--a~tlcGSplYMA 182 (429)
T KOG0595|consen 158 DFGFARFLQPGSM--AETLCGSPLYMA 182 (429)
T ss_pred ccchhhhCCchhH--HHHhhCCccccC
Confidence 9999999854332 455899999998
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=290.72 Aligned_cols=163 Identities=28% Similarity=0.482 Sum_probs=139.1
Q ss_pred cCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 517 TNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
.+.||+|+||+||+|.|++...||||++...... .++|.+|+.+|.+++|||||+++|+|.+......+|||||++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 4459999999999999985555999999764433 4589999999999999999999999986433588999999999
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC-ceEECCcccccccCCC
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF-EVRLGSLSELHAQGDS 672 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~-~~ki~Dfgla~~~~~~ 672 (693)
+|.+++++.. ...++|..++++|.|||+||.|||.+ .| ||||||||+|||++.++ ++||+|||+++....+
T Consensus 126 sL~~~l~~~~------~~~l~~~~~l~~aldiArGm~YLH~~-~~-iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 126 SLSVLLHKKR------KRKLPLKVRLRIALDIARGMEYLHSE-GP-IIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred cHHHHHhhcc------cCCCCHHHHHHHHHHHHHHHHHHhcC-CC-eeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 9999998741 14699999999999999999999987 22 99999999999999997 9999999999997554
Q ss_pred Ccceeeeeehhhhhhh
Q 035786 673 HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 673 ~~~~~~~~~~~~~y~a 688 (693)
. ..++...||..|||
T Consensus 198 ~-~~~~~~~GT~~wMA 212 (362)
T KOG0192|consen 198 K-TSMTSVAGTYRWMA 212 (362)
T ss_pred c-ccccCCCCCccccC
Confidence 3 22555778888887
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-32 Score=278.68 Aligned_cols=165 Identities=23% Similarity=0.330 Sum_probs=143.2
Q ss_pred CCCccCccccCCeeeEEEEE-eCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~lv~ 587 (693)
.|.....||+|.||.||||+ ..+|+.||+|++..+..+ ..-..+||.+|++++|||||+|.+...+. ....|||+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 35666789999999999998 578999999999765433 33456899999999999999999988765 45799999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
|||++ ||.-++.... ..++..+...|+.|++.||+|+|.. +|+|||||.+|||||.++..||+|||||+
T Consensus 198 eYMdh-DL~GLl~~p~-------vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr 266 (560)
T KOG0600|consen 198 EYMDH-DLSGLLSSPG-------VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLAR 266 (560)
T ss_pred ecccc-hhhhhhcCCC-------cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEecccccee
Confidence 99998 8887776422 4589999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
++........|..+.|.||+|
T Consensus 267 ~y~~~~~~~~T~rVvTLWYRp 287 (560)
T KOG0600|consen 267 FYTPSGSAPYTSRVVTLWYRP 287 (560)
T ss_pred eccCCCCcccccceEEeeccC
Confidence 996665555888999999987
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=262.65 Aligned_cols=168 Identities=25% Similarity=0.372 Sum_probs=143.3
Q ss_pred ccCHHHHHHHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEE
Q 035786 501 SFTYEQLLRATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCL 577 (693)
Q Consensus 501 ~~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~ 577 (693)
.++..|+++ .+.||+|..|+|||+.. ++++.+|+|.+..... -+++..+|++++.+.+||+||.++|.|+
T Consensus 75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 355666544 46899999999999997 4689999999954332 2678999999999999999999999998
Q ss_pred cCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 578 EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 578 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
....+..++||||.+|||++++.+.. .++....-+||.+|.+||.|||+. .+||||||||+|||+++.++
T Consensus 148 ~~~~~isI~mEYMDgGSLd~~~k~~g--------~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGe 217 (364)
T KOG0581|consen 148 SNGEEISICMEYMDGGSLDDILKRVG--------RIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGE 217 (364)
T ss_pred eCCceEEeehhhcCCCCHHHHHhhcC--------CCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCC
Confidence 64325999999999999999987542 388899999999999999999963 38999999999999999999
Q ss_pred eEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 658 VRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 658 ~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+||+|||.++.+..+ ....++||..|||
T Consensus 218 VKicDFGVS~~lvnS---~a~tfvGT~~YMs 245 (364)
T KOG0581|consen 218 VKICDFGVSGILVNS---IANTFVGTSAYMS 245 (364)
T ss_pred EEeccccccHHhhhh---hcccccccccccC
Confidence 999999999998555 3456889999987
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-31 Score=259.21 Aligned_cols=165 Identities=19% Similarity=0.309 Sum_probs=142.9
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~lv 586 (693)
++|...|.|++|+||.||||+. ++++.||+|+++..... .-.-.+||.+|.+++|||||.+........ +..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 3467778999999999999996 57899999999875532 235688999999999999999988776432 468999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
||||+. ||+..++.-. +++...+...+..|+.+|+.|||++ .|+|||||++|+|+.+.+..||+|||+|
T Consensus 156 Me~~Eh-DLksl~d~m~-------q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLA 224 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK-------QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLA 224 (419)
T ss_pred HHHHHh-hHHHHHHhcc-------CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchh
Confidence 999997 9999997532 4688888899999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|.+++.... +|..++|.||+|
T Consensus 225 R~ygsp~k~-~T~lVVTLWYRa 245 (419)
T KOG0663|consen 225 REYGSPLKP-YTPLVVTLWYRA 245 (419)
T ss_pred hhhcCCccc-CcceEEEeeecC
Confidence 999887554 888999999997
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=274.24 Aligned_cols=146 Identities=28% Similarity=0.493 Sum_probs=133.5
Q ss_pred cCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCChh
Q 035786 517 TNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLA 596 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~ 596 (693)
.+.||+|-||+||.|.|++...||||.++......++|.+|+++|.+++|+|||+++|+|... +..+||+|||++|+|.
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~-~piyIVtE~m~~GsLl 289 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ-EPIYIVTEYMPKGSLL 289 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecC-CceEEEEEecccCcHH
Confidence 467999999999999999888999999998887888999999999999999999999999853 4799999999999999
Q ss_pred hhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCC
Q 035786 597 SSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDS 672 (693)
Q Consensus 597 ~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~ 672 (693)
+||+.... ..+.-.+.+.+|.|||+||+||+++ .+|||||.++|||++++..+||+||||||...+.
T Consensus 290 ~yLr~~~~------~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 290 DYLRTREG------GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDD 356 (468)
T ss_pred HHhhhcCC------CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCC
Confidence 99986322 4588999999999999999999999 9999999999999999999999999999976443
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=261.02 Aligned_cols=161 Identities=23% Similarity=0.393 Sum_probs=132.6
Q ss_pred CccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhc--CCCCCccceeEEEEcC---CCeeEEEEcc
Q 035786 515 SETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSR--VSHARLVPLLGQCLEH---ETEKLLVYKY 589 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~--l~H~niv~l~g~~~~~---~~~~~lv~ey 589 (693)
....+||+|+||.||||++. ++.||||++... +.++|.+|-++++- ++|+||++++++-... ..+.+||+||
T Consensus 213 ~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~--~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f 289 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ--EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEF 289 (534)
T ss_pred hhHHHhhcCccceeehhhcc-CceeEEEecCHH--HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeee
Confidence 34568999999999999996 489999999653 35678888887764 5899999999864211 2367899999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccC------CCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHE------CNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~------~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
.++|+|.+||.. ..++|....+||.-+|+||+|||++ .+|+|+|||||++|||+..|+++.|+||
T Consensus 290 h~kGsL~dyL~~---------ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 290 HPKGSLCDYLKA---------NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred ccCCcHHHHHHh---------ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 999999999986 3599999999999999999999976 4789999999999999999999999999
Q ss_pred ccccccCC--CCcceeeeeehhhhhhh
Q 035786 664 SELHAQGD--SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~--~~~~~~~~~~~~~~y~a 688 (693)
|||..+.. .... ...-+||..|||
T Consensus 361 GLAl~~~p~~~~~d-~~~qVGT~RYMA 386 (534)
T KOG3653|consen 361 GLALRLEPGKPQGD-THGQVGTRRYMA 386 (534)
T ss_pred ceeEEecCCCCCcc-hhhhhhhhhhcC
Confidence 99998721 1111 111678888987
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-30 Score=246.03 Aligned_cols=162 Identities=19% Similarity=0.349 Sum_probs=138.3
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|...+.+|+|.||.||+|+. .+|+.||||+++..... .....+||+.|+.++|+||+.++.++-. .+..-||+||
T Consensus 4 Y~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~-~~~l~lVfEf 82 (318)
T KOG0659|consen 4 YEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH-KSNLSLVFEF 82 (318)
T ss_pred hhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC-CCceEEEEEe
Confidence 55567899999999999984 57999999999876543 4578899999999999999999997764 4578899999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|+. +|+..++... ..+..++...++.++.+|++|+|.+ .|+||||||.|+|+++++..||+|||+||.+
T Consensus 83 m~t-dLe~vIkd~~-------i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f 151 (318)
T KOG0659|consen 83 MPT-DLEVVIKDKN-------IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFF 151 (318)
T ss_pred ccc-cHHHHhcccc-------cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhcc
Confidence 986 9998887533 4689999999999999999999999 8999999999999999999999999999998
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
+..... .+.-+.|+||+|
T Consensus 152 ~~p~~~-~~~~V~TRWYRA 169 (318)
T KOG0659|consen 152 GSPNRI-QTHQVVTRWYRA 169 (318)
T ss_pred CCCCcc-cccceeeeeccC
Confidence 654332 233377888887
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=255.53 Aligned_cols=164 Identities=21% Similarity=0.298 Sum_probs=137.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|+..++||+|+||+||.++. ++++.+|+|.+++... ..+...+|..+|.+++||+||++. |-+++.+..|||
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~-ysFQt~~kLylV 103 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLI-YSFQTEEKLYLV 103 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeE-EecccCCeEEEE
Confidence 4588899999999999999986 4589999999976432 245788999999999999999997 445556789999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
+||+.||+|..+|++... ++.....-++..|+.||.|||+. +||||||||+|||||+++.++++|||++
T Consensus 104 ld~~~GGeLf~hL~~eg~--------F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~ 172 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGR--------FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLC 172 (357)
T ss_pred EeccCCccHHHHHHhcCC--------cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccc
Confidence 999999999999986432 55665555777899999999999 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+......+. ...+|||++|||
T Consensus 173 k~~~~~~~~-t~tfcGT~eYmA 193 (357)
T KOG0598|consen 173 KEDLKDGDA-TRTFCGTPEYMA 193 (357)
T ss_pred hhcccCCCc-cccccCCccccC
Confidence 976333222 223899999998
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-30 Score=249.61 Aligned_cols=162 Identities=17% Similarity=0.235 Sum_probs=135.7
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|+..-++|+|+||+|||++-+ +|+.||||++...... .+-.++||++++.++|+|+|.|+.+|.. ....+||+||
T Consensus 4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr-krklhLVFE~ 82 (396)
T KOG0593|consen 4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR-KRKLHLVFEY 82 (396)
T ss_pred HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh-cceeEEEeee
Confidence 455567999999999999964 5999999999654432 4567899999999999999999998864 4678899999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++.--|+++-+.. .-++.....+|..|+++|+.|+|.+ .||||||||+|||+..++.+|++|||+||.+
T Consensus 83 ~dhTvL~eLe~~p--------~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L 151 (396)
T KOG0593|consen 83 CDHTVLHELERYP--------NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTL 151 (396)
T ss_pred cchHHHHHHHhcc--------CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhh
Confidence 9975454433221 3377888899999999999999999 8999999999999999999999999999998
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
..... ..|.++.|+||||
T Consensus 152 ~~pgd-~YTDYVATRWYRa 169 (396)
T KOG0593|consen 152 SAPGD-NYTDYVATRWYRA 169 (396)
T ss_pred cCCcc-hhhhhhhhhhccC
Confidence 65333 3788999999997
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=280.15 Aligned_cols=152 Identities=25% Similarity=0.389 Sum_probs=131.8
Q ss_pred CCccCccccCCeeeEEEEEeCC------CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~------g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
....+.||+|.||+||+|+..+ .+.||||.++.... .+++|.+|++++++++|||||+|+|.|.+. +..++
T Consensus 488 i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~-~P~~M 566 (774)
T KOG1026|consen 488 IVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG-DPLCM 566 (774)
T ss_pred eeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC-CeeEE
Confidence 4445679999999999998532 46799999986543 367999999999999999999999999974 68999
Q ss_pred EEccCCCCChhhhhhccCCCCCC------CCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceE
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDD------SLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~------~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~k 659 (693)
|+|||..|||.+||+......+. ...+|+-.+.+.||.|||.||+||.++ ++|||||..+|+|+.+++.+|
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~VK 643 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVVK 643 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEEE
Confidence 99999999999999854322111 144599999999999999999999988 999999999999999999999
Q ss_pred ECCccccccc
Q 035786 660 LGSLSELHAQ 669 (693)
Q Consensus 660 i~Dfgla~~~ 669 (693)
|+|||+.|.+
T Consensus 644 IsDfGLsRdi 653 (774)
T KOG1026|consen 644 ISDFGLSRDI 653 (774)
T ss_pred ecccccchhh
Confidence 9999999986
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-29 Score=266.36 Aligned_cols=164 Identities=18% Similarity=0.291 Sum_probs=144.8
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecc----cccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSL----HSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~----~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
..|...+.||+|||..||+++- ..|+.||+|++.+ ...+++...+||++.++++|||||++++||-+ .+.+|+|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED-s~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED-SNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec-CCceEEE
Confidence 3478889999999999999996 7899999999976 34446789999999999999999999997765 5789999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
.|+|++|+|.+++.+. ++++..+...+..||+.||.|||+. +|||||||-.|++|++++++||+|||||
T Consensus 97 LELC~~~sL~el~Krr--------k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLA 165 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRR--------KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLA 165 (592)
T ss_pred EEecCCccHHHHHHhc--------CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEeccccee
Confidence 9999999999988742 4699999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
..+...+.. ....||||-|+|
T Consensus 166 t~le~~~Er-k~TlCGTPNYIA 186 (592)
T KOG0575|consen 166 TQLEYDGER-KKTLCGTPNYIA 186 (592)
T ss_pred eeecCcccc-cceecCCCcccC
Confidence 998533322 334899999987
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=256.13 Aligned_cols=161 Identities=16% Similarity=0.244 Sum_probs=135.6
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--------KESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
|-..+.+|+|+||.|-+|.- .+|+.||||.+++.... .....+|+++|.+++|||||++++++-. +...|
T Consensus 174 yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~-~ds~Y 252 (475)
T KOG0615|consen 174 YIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV-PDSSY 252 (475)
T ss_pred eEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec-CCceE
Confidence 44567899999999999984 67999999999753211 1234689999999999999999998864 46789
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC---CceEEC
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK---FEVRLG 661 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~---~~~ki~ 661 (693)
||+|||++|+|.+++-.... +....-..++.|+..|+.|||+. +|+||||||+|||+..+ ..+||+
T Consensus 253 mVlE~v~GGeLfd~vv~nk~--------l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKIt 321 (475)
T KOG0615|consen 253 MVLEYVEGGELFDKVVANKY--------LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKIT 321 (475)
T ss_pred EEEEEecCccHHHHHHhccc--------cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEec
Confidence 99999999999999976543 55555567999999999999999 99999999999999765 889999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+||..+. ...+.++||||-|.|
T Consensus 322 DFGlAK~~g~--~sfm~TlCGTpsYvA 346 (475)
T KOG0615|consen 322 DFGLAKVSGE--GSFMKTLCGTPSYVA 346 (475)
T ss_pred ccchhhcccc--ceehhhhcCCccccC
Confidence 9999999873 344788999999987
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=255.47 Aligned_cols=175 Identities=22% Similarity=0.320 Sum_probs=143.8
Q ss_pred cCHHHHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcC--CCCCccceeEEEEcC
Q 035786 502 FTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRV--SHARLVPLLGQCLEH 579 (693)
Q Consensus 502 ~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l--~H~niv~l~g~~~~~ 579 (693)
.++--.+.........+.||+|+||+||+|.|+ |+.||||.+.. ..+++|.+|.|+...+ ||+||..+++.-..+
T Consensus 201 lplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s--rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~ 277 (513)
T KOG2052|consen 201 LPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS--RDERSWFRETEIYQTVMLRHENILGFIAADNKD 277 (513)
T ss_pred chhHhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEecc--cchhhhhhHHHHHHHHHhccchhhhhhhccccC
Confidence 343333334455677789999999999999997 88999999853 3467899999999866 999999998865422
Q ss_pred C---CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccC-----CCCCeEecCCCCCCee
Q 035786 580 E---TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHE-----CNPPLVHRDVQASSIL 651 (693)
Q Consensus 580 ~---~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~-----~~p~iiHrDlk~~NIL 651 (693)
. .+.+||.||.++|||.|||.+ ..++-..-+++|..+|.||++||.+ -+|.|.|||||+.|||
T Consensus 278 ~gs~TQLwLvTdYHe~GSL~DyL~r---------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNIL 348 (513)
T KOG2052|consen 278 NGSWTQLWLVTDYHEHGSLYDYLNR---------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL 348 (513)
T ss_pred CCceEEEEEeeecccCCcHHHHHhh---------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEE
Confidence 2 257999999999999999976 3589999999999999999999965 4799999999999999
Q ss_pred eCCCCceEECCcccccccCCC---Ccceeeeeehhhhhhh
Q 035786 652 LDDKFEVRLGSLSELHAQGDS---HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 652 ld~~~~~ki~Dfgla~~~~~~---~~~~~~~~~~~~~y~a 688 (693)
+.+++...|+|+|||-..... -+......+||..|||
T Consensus 349 VKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMA 388 (513)
T KOG2052|consen 349 VKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMA 388 (513)
T ss_pred EccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccC
Confidence 999999999999999886322 2223555789999988
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=271.99 Aligned_cols=179 Identities=22% Similarity=0.326 Sum_probs=148.9
Q ss_pred CccCHHHHHHHhCCCC---------ccCccccCCeeeEEEEEeCC----CcEEEEEEecccc--cCHHHHHHHHHHHhcC
Q 035786 500 DSFTYEQLLRATGNFS---------ETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHS--FKKESYMMELDLFSRV 564 (693)
Q Consensus 500 ~~~~~~~l~~at~~~~---------~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l 564 (693)
++++|||--+|...|. .+++||.|.||+||+|.++- ...||||.|+.+. +++.+|+.|..+|+++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 5788888777766664 35789999999999999742 4579999998754 3467999999999999
Q ss_pred CCCCccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecC
Q 035786 565 SHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRD 644 (693)
Q Consensus 565 ~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrD 644 (693)
.||||++|.|+.. +...+++|.|||+||+|+.||+.... .++|.+...+-.|||.||.||.+. ..||||
T Consensus 688 dHPNIIrLEGVVT-ks~PvMIiTEyMENGsLDsFLR~~DG-------qftviQLVgMLrGIAsGMkYLsdm---~YVHRD 756 (996)
T KOG0196|consen 688 DHPNIIRLEGVVT-KSKPVMIITEYMENGSLDSFLRQNDG-------QFTVIQLVGMLRGIASGMKYLSDM---NYVHRD 756 (996)
T ss_pred CCCcEEEEEEEEe-cCceeEEEhhhhhCCcHHHHHhhcCC-------ceEeehHHHHHHHHHHHhHHHhhc---Cchhhh
Confidence 9999999999886 45789999999999999999986542 489999999999999999999987 999999
Q ss_pred CCCCCeeeCCCCceEECCcccccccCCCC-cceee------eeehhhhhhhh
Q 035786 645 VQASSILLDDKFEVRLGSLSELHAQGDSH-QNVLT------RFLWRQLYQSC 689 (693)
Q Consensus 645 lk~~NILld~~~~~ki~Dfgla~~~~~~~-~~~~~------~~~~~~~y~a~ 689 (693)
|.++|||++.+..+||+|||+.|.+.+.. ....| ..+.+|+.+|.
T Consensus 757 LAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~ 808 (996)
T KOG0196|consen 757 LAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAY 808 (996)
T ss_pred hhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhh
Confidence 99999999999999999999999884432 22111 24556666653
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-30 Score=250.47 Aligned_cols=169 Identities=20% Similarity=0.319 Sum_probs=142.4
Q ss_pred CCccCccccCCeeeEEEEE-eCCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCe-eEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETE-KLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~-~~lv~e 588 (693)
|...+.||+|+||+|||+. +.+|..||.|+++.+.. .+++...||.+|+.++|||||+++++-+..+++ .++|||
T Consensus 21 y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE 100 (375)
T KOG0591|consen 21 YQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVME 100 (375)
T ss_pred HHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHH
Confidence 5556789999999999998 67899999999975433 356889999999999999999999865544455 789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCC--eEecCCCCCCeeeCCCCceEECCcccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPP--LVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~--iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|+..|||...++..+. ..+.++..+..++..|+++||..+|.. -|+ |+||||||.||+|+.++.+|++|||++
T Consensus 101 ~c~~GDLsqmIk~~K~----qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 101 LCDAGDLSQMIKHFKK----QKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred hhcccCHHHHHHHHHh----ccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccchhH
Confidence 9999999999985432 124588999999999999999999984 235 999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+.....+ ....++|||+||+
T Consensus 176 r~l~s~~t-fA~S~VGTPyYMS 196 (375)
T KOG0591|consen 176 RFLSSKTT-FAHSLVGTPYYMS 196 (375)
T ss_pred hHhcchhH-HHHhhcCCCcccC
Confidence 99855443 3566899999985
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.2e-30 Score=262.56 Aligned_cols=162 Identities=15% Similarity=0.321 Sum_probs=141.7
Q ss_pred CCccCccccCCeeeEEEEE-eCCCcEEEEEEecccccCHHHH--HHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESY--MMELDLFSRVS-HARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~~~~~f--~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|...+.+|.|.||.||+|+ ..+|+.||||+++..-..-++. .|||+.|.++. |||||++...+.+.+...++||||
T Consensus 12 Y~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~ 91 (538)
T KOG0661|consen 12 YTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEF 91 (538)
T ss_pred HHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHh
Confidence 4455789999999999998 4679999999997644443333 57999999998 999999999998876688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|+. +|.++++++. +.++..+...|+.||.+||+|+|.+ ++.|||+||+|||+.....+||+|||+||.+
T Consensus 92 Md~-NLYqLmK~R~-------r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 92 MDC-NLYQLMKDRN-------RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred hhh-hHHHHHhhcC-------CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 986 9999997643 5699999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
.+... .|.++-|+||||
T Consensus 161 ~SkpP--YTeYVSTRWYRA 177 (538)
T KOG0661|consen 161 RSKPP--YTEYVSTRWYRA 177 (538)
T ss_pred ccCCC--cchhhhcccccc
Confidence 77666 678889999987
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=248.01 Aligned_cols=147 Identities=24% Similarity=0.428 Sum_probs=129.3
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
+...+.||+|.||.|..+...++..||||++...... +.+|.+||++|++++|||||+|+|+|.. ++..++|+|||+
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~-DePicmI~EYmE 618 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ-DDPLCMITEYME 618 (807)
T ss_pred eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec-CCchHHHHHHHh
Confidence 3445789999999999999998899999999876544 5799999999999999999999999986 467889999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|+|.+||.++.. ..++-..-.+||.|||.||+||.+. .+||||+.++|+|+|.++++||+|||++|-+.
T Consensus 619 nGDLnqFl~ahea------pt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 619 NGDLNQFLSAHEL------PTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLY 688 (807)
T ss_pred cCcHHHHHHhccC------cccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccc
Confidence 9999999987542 1134455677999999999999987 99999999999999999999999999999663
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-29 Score=260.01 Aligned_cols=285 Identities=25% Similarity=0.249 Sum_probs=162.1
Q ss_pred cccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCC
Q 035786 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELK 166 (693)
Q Consensus 87 ~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 166 (693)
..+.+|++|+.+++..|.++ .||...+ ...+|+.|+|.+|.|+..-.+++..++.|+.||||.|.++..--.+|..-.
T Consensus 96 ~~f~nl~nLq~v~l~~N~Lt-~IP~f~~-~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ 173 (873)
T KOG4194|consen 96 EFFYNLPNLQEVNLNKNELT-RIPRFGH-ESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKV 173 (873)
T ss_pred HHHhcCCcceeeeeccchhh-hcccccc-cccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCC
Confidence 44566777777777666654 4554332 245566666666666655555566666666666666666543333454445
Q ss_pred CCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEcc
Q 035786 167 KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLS 246 (693)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 246 (693)
++++|+|++|.|+..-...|..+.+|..|.|+.|+++...+..|.++++|+.|+|..|++.-.---.|.++.+|+.|.|.
T Consensus 174 ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklq 253 (873)
T KOG4194|consen 174 NIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQ 253 (873)
T ss_pred CceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhh
Confidence 56666666666665555556666666666666666664444455556666666666666542223345555555555555
Q ss_pred CCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCccc
Q 035786 247 KNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS 326 (693)
Q Consensus 247 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~ 326 (693)
.|.++..-...|..+.++++|+|+.|+++. +.++++-+++.|+.|+||+|.|...-++.+...++|+.||||+|+|+ .
T Consensus 254 rN~I~kL~DG~Fy~l~kme~l~L~~N~l~~-vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~-~ 331 (873)
T KOG4194|consen 254 RNDISKLDDGAFYGLEKMEHLNLETNRLQA-VNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT-R 331 (873)
T ss_pred hcCcccccCcceeeecccceeecccchhhh-hhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccc-c
Confidence 555555444555555666666666666552 23333345566666666666666555555555666666666666665 3
Q ss_pred CCccCcCCCCCCcEEEccCCccceecCC---CCCCCCCEEEccCCcceeecCC
Q 035786 327 WPILSTNGNASGAVFNISNNMLYGDLNS---SSFRKFSLIDLSSNYFQGTVAD 376 (693)
Q Consensus 327 ~p~~~~~~~~~l~~l~ls~N~l~g~~~~---~~~~~l~~ldLs~N~l~g~ip~ 376 (693)
++...+..+..|+.|+|++|.++- +.. ..+++|+.|||++|.+++.|-+
T Consensus 332 l~~~sf~~L~~Le~LnLs~Nsi~~-l~e~af~~lssL~~LdLr~N~ls~~IED 383 (873)
T KOG4194|consen 332 LDEGSFRVLSQLEELNLSHNSIDH-LAEGAFVGLSSLHKLDLRSNELSWCIED 383 (873)
T ss_pred CChhHHHHHHHhhhhcccccchHH-HHhhHHHHhhhhhhhcCcCCeEEEEEec
Confidence 444444555555555555555531 111 2345566666666666666654
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-28 Score=233.73 Aligned_cols=160 Identities=19% Similarity=0.244 Sum_probs=139.9
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|+....+|.|+||+|...+.. +|.-+|+|.++.... +.+...+|..+|+.+.||++|++.+-|.+. ...||||
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~-~~lymvm 123 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN-SNLYMVM 123 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC-CeEEEEE
Confidence 3667789999999999999864 588999999976542 346788999999999999999999988764 6899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|.|..+|++.++ ++.....-+|.+|+.|++|||+. .||+||+||+|||||.++.+||.|||+|+
T Consensus 124 eyv~GGElFS~Lrk~~r--------F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK 192 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGR--------FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAK 192 (355)
T ss_pred eccCCccHHHHHHhcCC--------CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceE
Confidence 99999999999987643 67777778999999999999998 99999999999999999999999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+.+.. -..||||+|+|
T Consensus 193 ~v~~rT----~TlCGTPeYLA 209 (355)
T KOG0616|consen 193 RVSGRT----WTLCGTPEYLA 209 (355)
T ss_pred EecCcE----EEecCCccccC
Confidence 984432 23899999997
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.4e-29 Score=259.51 Aligned_cols=289 Identities=26% Similarity=0.285 Sum_probs=229.3
Q ss_pred cccccCCCCCEEEccCCCCCCcCch-HhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCC
Q 035786 87 DSLGNLTLLSSFNASGLSLPGSIPE-WFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGEL 165 (693)
Q Consensus 87 ~~l~~L~~L~~L~ls~~~l~g~ip~-~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 165 (693)
+++.-++.|++||||.|.++ .||. .|. .-.++++|+|++|.|+..--+.|.++.+|.+|.|+.|+++...+..|.+|
T Consensus 143 e~L~~l~alrslDLSrN~is-~i~~~sfp-~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L 220 (873)
T KOG4194|consen 143 EELSALPALRSLDLSRNLIS-EIPKPSFP-AKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRL 220 (873)
T ss_pred HHHHhHhhhhhhhhhhchhh-cccCCCCC-CCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhc
Confidence 46777888888888888765 3332 222 24678888888888887777788888888888888888886666678888
Q ss_pred CCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEc
Q 035786 166 KKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDL 245 (693)
Q Consensus 166 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 245 (693)
++|+.|||..|+|.-.--..|.++.+|+.|.|..|.+...-...|..|.++++|+|+.|+++..--.++.++++|+.|+|
T Consensus 221 ~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~l 300 (873)
T KOG4194|consen 221 PKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDL 300 (873)
T ss_pred chhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhcc
Confidence 88888888888886433456788888888888888887666667888888999999999888777778888999999999
Q ss_pred cCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcc
Q 035786 246 SKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG 325 (693)
Q Consensus 246 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g 325 (693)
|+|.+...-++.++-.++|++|+|++|+++ .++++.|..+..|++|+|++|+++..-...|..+++|+.|||++|.|++
T Consensus 301 S~NaI~rih~d~WsftqkL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~ 379 (873)
T KOG4194|consen 301 SYNAIQRIHIDSWSFTQKLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSW 379 (873)
T ss_pred chhhhheeecchhhhcccceeEeccccccc-cCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEE
Confidence 999988888888888889999999999988 5677777888889999999999887767777888899999999999887
Q ss_pred cCCcc--CcCCCCCCcEEEccCCccceecCC---CCCCCCCEEEccCCcceeecCCCcC
Q 035786 326 SWPIL--STNGNASGAVFNISNNMLYGDLNS---SSFRKFSLIDLSSNYFQGTVADDRG 379 (693)
Q Consensus 326 ~~p~~--~~~~~~~l~~l~ls~N~l~g~~~~---~~~~~l~~ldLs~N~l~g~ip~~~~ 379 (693)
.|.+. .+.++++|+.|++.+|++.. ||. ..+..|+.|||.+|.+..--|+.+.
T Consensus 380 ~IEDaa~~f~gl~~LrkL~l~gNqlk~-I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe 437 (873)
T KOG4194|consen 380 CIEDAAVAFNGLPSLRKLRLTGNQLKS-IPKRAFSGLEALEHLDLGDNAIASIQPNAFE 437 (873)
T ss_pred EEecchhhhccchhhhheeecCceeee-cchhhhccCcccceecCCCCcceeecccccc
Confidence 76542 34567888889999998863 554 5677888999999988766555543
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-27 Score=250.38 Aligned_cols=162 Identities=23% Similarity=0.322 Sum_probs=141.6
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCH---HHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKK---ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~---~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+|...+.||+|+||.||||+.+ +.+.||+|.+.+..... +...+|++++++++|||||.++.+|- .+.+.++|.|
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfE-t~~~~~vVte 81 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFE-TSAHLWVVTE 81 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhc-ccceEEEEeh
Confidence 4566678999999999999865 58899999997654443 45789999999999999999998774 5678999999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+.+ +|+.+|.... .+...+...||.+...||.|||+. +|+|||+||.||||+..+.+|++|||+||.
T Consensus 82 ~a~g-~L~~il~~d~--------~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~ 149 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG--------KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARA 149 (808)
T ss_pred hhhh-hHHHHHHhcc--------CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhh
Confidence 9987 9999997543 488999999999999999999999 999999999999999999999999999999
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
++. .+.+.+++.|||.|||
T Consensus 150 m~~-~t~vltsikGtPlYmA 168 (808)
T KOG0597|consen 150 MST-NTSVLTSIKGTPLYMA 168 (808)
T ss_pred ccc-CceeeeeccCcccccC
Confidence 754 3445788999999998
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-27 Score=241.24 Aligned_cols=165 Identities=25% Similarity=0.360 Sum_probs=138.6
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCC-eeEEEEccC
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHET-EKLLVYKYM 590 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-~~~lv~ey~ 590 (693)
+...+.||+|+||.||++... +|...|||.+...... .+...+|+++|.+++|||||+.+|.....++ ..++.|||+
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~ 98 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA 98 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence 445678999999999999975 4999999998765322 4568899999999999999999997544433 578999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-CCceEECCccccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-KFEVRLGSLSELHAQ 669 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~-~~~~ki~Dfgla~~~ 669 (693)
++|+|.+++.+... .|+.....+++.+|++||+|||++ +||||||||+|||++. ++.+||+|||+++..
T Consensus 99 ~~GsL~~~~~~~g~-------~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 99 PGGSLSDLIKRYGG-------KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred CCCcHHHHHHHcCC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 99999999986431 489999999999999999999988 9999999999999999 799999999999987
Q ss_pred CC--CCcceeeeeehhhhhhh
Q 035786 670 GD--SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~--~~~~~~~~~~~~~~y~a 688 (693)
.. ........+.||+.|||
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~ma 189 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMA 189 (313)
T ss_pred ccccccccccccccCCccccC
Confidence 53 22223445788999887
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-27 Score=237.62 Aligned_cols=166 Identities=20% Similarity=0.308 Sum_probs=137.9
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCC-ccceeEEEEcCCC-----ee
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHAR-LVPLLGQCLEHET-----EK 583 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~n-iv~l~g~~~~~~~-----~~ 583 (693)
|...+.||+|+||+||||+. .+|+.||+|++.....+ ...-.+|+-++.+++|+| ||+|.+++.+... ..
T Consensus 13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l 92 (323)
T KOG0594|consen 13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKL 92 (323)
T ss_pred HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceE
Confidence 44456799999999999984 67899999999765432 456789999999999999 9999999986432 67
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
+||+||+.. +|.+++....... ..++-.....++.|+.+||+|||++ +|+||||||.|||+++++..||+||
T Consensus 93 ~lvfe~~d~-DL~~ymd~~~~~~----~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 93 YLVFEFLDR-DLKKYMDSLPKKP----QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred EEEEEeecc-cHHHHHHhccccc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeecc
Confidence 899999986 9999998644211 2366678899999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+|+..+-.... .+..++|.||+|
T Consensus 165 GlAra~~ip~~~-yt~evvTlWYRa 188 (323)
T KOG0594|consen 165 GLARAFSIPMRT-YTPEVVTLWYRA 188 (323)
T ss_pred chHHHhcCCccc-ccccEEEeeccC
Confidence 999987533332 566889999987
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-27 Score=240.02 Aligned_cols=163 Identities=22% Similarity=0.332 Sum_probs=125.2
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCC--ee--EEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET--EK--LLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~--~~--~lv~ 587 (693)
.|...+++|.|+||.||+|++. +++.||||++..+..-. -+|+++|++++|||||+|+-++....+ +. -|||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k---nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK---NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC---cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 3566789999999999999974 57999999986544321 259999999999999999987764322 23 3899
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEECCcccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLGSLSEL 666 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~Dfgla 666 (693)
||||. +|.++++..... ...++--...-++.|+.+||+|||.. +|+||||||.|+|+|.+ +..||+|||-|
T Consensus 102 eymP~-tL~~~~r~~~~~----~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHYTRA----NQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HhchH-HHHHHHHHHhhc----CCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 99997 999998742110 12344445556899999999999987 99999999999999966 99999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|.+...... ..+..|++|||
T Consensus 174 K~L~~~epn--iSYicSRyYRa 193 (364)
T KOG0658|consen 174 KVLVKGEPN--ISYICSRYYRA 193 (364)
T ss_pred eeeccCCCc--eeEEEeccccC
Confidence 998443332 23455555554
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-27 Score=253.47 Aligned_cols=148 Identities=27% Similarity=0.422 Sum_probs=128.5
Q ss_pred hCCCCccCccccCCeeeEEEEEeC--CC--cE-EEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA--GG--TT-VVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~--~g--~~-vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~ 581 (693)
.++....++||+|+||.||+|++. ++ .. ||||...... .+.++|.+|.++|++++|||||+++|++.. +.
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~-~~ 234 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL-EE 234 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC-CC
Confidence 344455589999999999999974 33 23 8999887422 235789999999999999999999999986 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..|+|||+|+||+|.+||+... ..++..++++++.++|+||+|||.. .+|||||.++|+|++.+..+||+
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~-------~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKIS 304 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNK-------KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKIS 304 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCC-------CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeC
Confidence 8999999999999999998643 2499999999999999999999999 99999999999999999999999
Q ss_pred Cccccccc
Q 035786 662 SLSELHAQ 669 (693)
Q Consensus 662 Dfgla~~~ 669 (693)
|||+++.-
T Consensus 305 DFGLs~~~ 312 (474)
T KOG0194|consen 305 DFGLSRAG 312 (474)
T ss_pred ccccccCC
Confidence 99998874
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8e-27 Score=246.94 Aligned_cols=143 Identities=22% Similarity=0.468 Sum_probs=127.4
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.+.....||+|+||+||||.|-+ .||||.++...-. .+.|++||.++++-||.||+=+.|||.. ....+|.-+
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~--p~~AIiTqw 468 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN--PPLAIITQW 468 (678)
T ss_pred Hhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC--Cceeeeehh
Confidence 34456789999999999999953 6999999875433 5789999999999999999999999985 345999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|++-+|+.+||..+ ..++..+-..||.|||+||.|||.. .|||||||+.||+|++++++||+|||+|-.-
T Consensus 469 CeGsSLY~hlHv~e-------tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 469 CEGSSLYTHLHVQE-------TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred ccCchhhhhccchh-------hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeee
Confidence 99999999999654 4699999999999999999999999 9999999999999999999999999998763
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-26 Score=244.66 Aligned_cols=162 Identities=20% Similarity=0.332 Sum_probs=142.3
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
.|..-..||+|+.|.||.|.- .+++.||||++....+. ++-..+|+.+|+..+|+|||.++.-|+.. ++.|.|||||
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-deLWVVMEym 352 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-DELWVVMEYM 352 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-ceeEEEEeec
Confidence 355667899999999999984 56889999999887666 45577999999999999999999887754 6899999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|-|.+.. ..++..+...|+.++.+||+|||.+ +|||||||+.|||++.++.+||+||||+..+.
T Consensus 353 ~ggsLTDvVt~---------~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~ 420 (550)
T KOG0578|consen 353 EGGSLTDVVTK---------TRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQIS 420 (550)
T ss_pred CCCchhhhhhc---------ccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccc
Confidence 99999998864 3489999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCcceeeeeehhhhhhh
Q 035786 671 DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~~~~~~~~~~y~a 688 (693)
.... ..+.++|||+|||
T Consensus 421 ~~~~-KR~TmVGTPYWMA 437 (550)
T KOG0578|consen 421 EEQS-KRSTMVGTPYWMA 437 (550)
T ss_pred cccC-ccccccCCCCccc
Confidence 5443 3566899999998
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-26 Score=241.32 Aligned_cols=167 Identities=20% Similarity=0.293 Sum_probs=137.6
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
..++|...++||+|+|.+||+|+- ..++++|||++++.-.- .+-..+|-++|.++ .||-||+|+-.|-+ +...
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD-~~sL 149 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD-EESL 149 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec-ccce
Confidence 345688889999999999999985 56899999999753321 23456788899999 89999999866654 5679
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
|.|+||++||+|.++|++.. .++...-..+|.+|..||+|||.. +||||||||+|||||+||.+||+||
T Consensus 150 YFvLe~A~nGdll~~i~K~G--------sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDF 218 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYG--------SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDF 218 (604)
T ss_pred EEEEEecCCCcHHHHHHHhC--------cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeec
Confidence 99999999999999998754 378877788999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCcc----------e--eeeeehhhhhhh
Q 035786 664 SELHAQGDSHQN----------V--LTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~----------~--~~~~~~~~~y~a 688 (693)
|-|+.+.+.+.. . ...++||-+|.+
T Consensus 219 GsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVS 255 (604)
T KOG0592|consen 219 GSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVS 255 (604)
T ss_pred cccccCChhhccccCccCcccccCcccceeeeecccC
Confidence 999997322111 1 245888888853
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-26 Score=244.13 Aligned_cols=155 Identities=20% Similarity=0.332 Sum_probs=129.3
Q ss_pred CCCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 582 (693)
++|...+.||+|+||.||+|.. .+++.||||++...... .+.+.+|++++.++ +|||||+++|+|...+..
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP 86 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence 4577788999999999999974 23568999998754322 45789999999999 899999999998765556
Q ss_pred eEEEEccCCCCChhhhhhccCCCC------------------------------------------------------CC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLE------------------------------------------------------DD 608 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~------------------------------------------------------~~ 608 (693)
.++||||+++|+|.++++...... ..
T Consensus 87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T cd05102 87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL 166 (338)
T ss_pred eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence 889999999999999997532100 00
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 609 SLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 609 ~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
....++|.+..+++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 167 ~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~ 224 (338)
T cd05102 167 WKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDI 224 (338)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeeccccccc
Confidence 013588999999999999999999988 9999999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-26 Score=261.77 Aligned_cols=151 Identities=28% Similarity=0.474 Sum_probs=132.2
Q ss_pred CCccCccccCCeeeEEEEEeCC--Cc----EEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLAG--GT----TVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~--g~----~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
....+.||+|.||.||+|++.+ |. .||||.+...... ..+|.+|..+|++++|||||+++|.|.+ ....++
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-~~~~~i 772 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-SGPPLI 772 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-CCCcEE
Confidence 4456789999999999999754 33 4999999875433 5689999999999999999999999997 568899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
++|||++|||..||++.+.. ......|+....+.+|.|||+|+.||++. ++|||||.++|+||++...+||+|||+
T Consensus 773 ~leyM~gGDL~sflr~~r~~-~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPA-PFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EehhcccCcHHHHHHhcccc-cCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccch
Confidence 99999999999999976432 12245699999999999999999999999 999999999999999999999999999
Q ss_pred cccc
Q 035786 666 LHAQ 669 (693)
Q Consensus 666 a~~~ 669 (693)
||.+
T Consensus 849 ArDi 852 (1025)
T KOG1095|consen 849 ARDI 852 (1025)
T ss_pred hHhh
Confidence 9954
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-26 Score=229.19 Aligned_cols=165 Identities=19% Similarity=0.318 Sum_probs=138.6
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecc---cccCHHHHHHHHHHHhcCCCCCccceeEEEEc----CCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSL---HSFKKESYMMELDLFSRVSHARLVPLLGQCLE----HETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~ 583 (693)
..|...+.||+|+||.|++|+. .+|+.||||++.. .....++..+|+++++.++|+|||.++..+.. .-++.
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 3455567899999999999986 5789999999962 12225678899999999999999999987753 12468
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
|+|+|+|+- ||...++.. +.|+-.....+..|+.+||.|+|+. .|+|||+||+|+|++++...||+||
T Consensus 102 YiV~elMet-DL~~iik~~--------~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DF 169 (359)
T KOG0660|consen 102 YLVFELMET-DLHQIIKSQ--------QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDF 169 (359)
T ss_pred EEehhHHhh-HHHHHHHcC--------ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccc
Confidence 999999954 899888753 2388888888999999999999998 9999999999999999999999999
Q ss_pred ccccccCC-CCcceeeeeehhhhhhh
Q 035786 664 SELHAQGD-SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~-~~~~~~~~~~~~~~y~a 688 (693)
|+||.... +++..+|.++.|+||+|
T Consensus 170 GLAR~~~~~~~~~~mTeYVaTRWYRA 195 (359)
T KOG0660|consen 170 GLARYLDKFFEDGFMTEYVATRWYRA 195 (359)
T ss_pred cceeeccccCcccchhcceeeeeecC
Confidence 99999832 45555788999999987
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-26 Score=219.06 Aligned_cols=164 Identities=18% Similarity=0.234 Sum_probs=138.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|+..+.+|+|.||.||.|+.+ ++-.||+|++.+.+.. .+++.+|+++-+.++||||.+++||+.+. ...||+
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~-~riyLi 100 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS-KRIYLI 100 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc-ceeEEE
Confidence 45888999999999999999974 5789999999654322 56799999999999999999999999864 689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
+||.++|++...|+.... ..++...-..++.|+|.|+.|+|.. .||||||||+|+|++.+++.|++|||-+
T Consensus 101 lEya~~gel~k~L~~~~~------~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGws 171 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRM------KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWS 171 (281)
T ss_pred EEecCCchHHHHHHhccc------ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCce
Confidence 999999999999985432 3466666678999999999999987 9999999999999999999999999986
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
-... ......+|||.-|.+
T Consensus 172 V~~p---~~kR~tlcgt~dyl~ 190 (281)
T KOG0580|consen 172 VHAP---SNKRKTLCGTLDYLP 190 (281)
T ss_pred eecC---CCCceeeecccccCC
Confidence 6543 223555889988864
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-26 Score=243.85 Aligned_cols=158 Identities=24% Similarity=0.385 Sum_probs=136.7
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
|.+.+.||.|+||.||-|+. .+.+.||||+++....+ -+++..||..|.+++|||+|.+.|+|. .+...|||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL-re~TaWLVME 106 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL-REHTAWLVME 106 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee-ccchHHHHHH
Confidence 56667899999999999984 57889999999876555 357889999999999999999999776 4678999999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
||- ||-.|.|.-.. +++.......|+.|+..||+|||+. ..||||||+.||||.+.+.+|++|||-|.+
T Consensus 107 YCl-GSAsDlleVhk-------KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi 175 (948)
T KOG0577|consen 107 YCL-GSASDLLEVHK-------KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASI 175 (948)
T ss_pred HHh-ccHHHHHHHHh-------ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhh
Confidence 996 68888886543 4688888999999999999999998 899999999999999999999999999998
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
...... ++|||+|||
T Consensus 176 ~~PAns-----FvGTPywMA 190 (948)
T KOG0577|consen 176 MAPANS-----FVGTPYWMA 190 (948)
T ss_pred cCchhc-----ccCCccccc
Confidence 754444 678888876
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=229.17 Aligned_cols=166 Identities=20% Similarity=0.309 Sum_probs=140.9
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.|....+||.|..++||+|.. +.++.||||+++....+ .+...+|++.|+-++|||||+++..|.. ++..|+||.|
T Consensus 27 ~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv-~~~LWvVmpf 105 (516)
T KOG0582|consen 27 DYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVV-DSELWVVMPF 105 (516)
T ss_pred ceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEe-cceeEEeehh
Confidence 466778999999999999984 67899999999876554 4678899999999999999999876654 5789999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|.+||+.+.+...-. .-++......|..++.+||.|||++ +-||||||+.|||||+++.+||+|||....+
T Consensus 106 Ma~GS~ldIik~~~~------~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYYP------DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred hcCCcHHHHHHHHcc------ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeee
Confidence 999999999975432 2388889999999999999999999 9999999999999999999999999987776
Q ss_pred CCCCccee---eeeehhhhhhh
Q 035786 670 GDSHQNVL---TRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~---~~~~~~~~y~a 688 (693)
.++..... ..++||++|||
T Consensus 177 ~~~G~R~~~rf~tfvgtp~wmA 198 (516)
T KOG0582|consen 177 FDSGDRQVTRFNTFVGTPCWMA 198 (516)
T ss_pred cccCceeeEeeccccCcccccC
Confidence 43322212 45789999987
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=234.69 Aligned_cols=153 Identities=21% Similarity=0.406 Sum_probs=128.2
Q ss_pred CCCccCccccCCeeeEEEEEeCC-----------------CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCcccee
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG-----------------GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLL 573 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~-----------------g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~ 573 (693)
.|...+.||+|+||.||++...+ +..||||.+...... ..+|.+|++++.+++|||||+++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 85 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLL 85 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence 46667889999999999997532 347999998654322 46799999999999999999999
Q ss_pred EEEEcCCCeeEEEEccCCCCChhhhhhccCCCC-----------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEe
Q 035786 574 GQCLEHETEKLLVYKYMVCGDLASSLHRVTDLE-----------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVH 642 (693)
Q Consensus 574 g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~-----------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiH 642 (693)
++|.+ ++..++||||+++|+|.+++....... ......++|.+..+++.|++.||+|||+. +|+|
T Consensus 86 ~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 86 GVCVD-EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEec-CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 99876 467899999999999999996532111 11124589999999999999999999988 8999
Q ss_pred cCCCCCCeeeCCCCceEECCccccccc
Q 035786 643 RDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 643 rDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|||||+|||+++++.+||+|||+++..
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~ 188 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNL 188 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceec
Confidence 999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=232.09 Aligned_cols=167 Identities=19% Similarity=0.271 Sum_probs=133.7
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---------------HHHHHHHHHHHhcCCCCCcccee
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---------------KESYMMELDLFSRVSHARLVPLL 573 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---------------~~~f~~Ei~~l~~l~H~niv~l~ 573 (693)
..+.|.....||+|.||+|-+|.- .+++.||||.+.+.... .+...+||.+|++++|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 456688888999999999999985 57999999999653211 24788999999999999999999
Q ss_pred EEEEcC-CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 574 GQCLEH-ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 574 g~~~~~-~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
.+--+. .+..|||+|||..|.+.. .. . + ...++..+..+|..++..||+|||.+ +||||||||+|+||
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w-~p--~---d--~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl 243 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKW-CP--P---D--KPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLL 243 (576)
T ss_pred EeecCcccCceEEEEEeccCCcccc-CC--C---C--cccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEE
Confidence 854322 246899999999998752 11 1 1 12289999999999999999999999 99999999999999
Q ss_pred CCCCceEECCcccccccC-----CCCcceeeeeehhhhhhh
Q 035786 653 DDKFEVRLGSLSELHAQG-----DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~~-----~~~~~~~~~~~~~~~y~a 688 (693)
++++++||+|||.+-... +... ...+.+|||.++|
T Consensus 244 ~~~g~VKIsDFGVs~~~~~~~~~~~d~-~L~~tvGTPAF~A 283 (576)
T KOG0585|consen 244 SSDGTVKISDFGVSNEFPQGSDEGSDD-QLSRTVGTPAFFA 283 (576)
T ss_pred cCCCcEEeeccceeeecccCCccccHH-HHhhcCCCccccc
Confidence 999999999999987651 1111 1334789999987
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=242.41 Aligned_cols=165 Identities=17% Similarity=0.207 Sum_probs=138.1
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.++|...+.||+|+||.||+++.. +++.||+|.+..... ..+.+.+|+++++.++|||||++++++.+ +...++
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~-~~~~~l 120 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD-DKYLYM 120 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCEEEE
Confidence 456888889999999999999975 588999999864221 23468899999999999999999998765 568999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++... .++..+...++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 121 v~Ey~~gg~L~~~l~~~---------~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~ 188 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY---------DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGT 188 (370)
T ss_pred EEcCCCCCcHHHHHHhc---------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEeccc
Confidence 99999999999998642 377888899999999999999988 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++.............+||++|+|
T Consensus 189 a~~~~~~~~~~~~~~~gt~~Y~a 211 (370)
T cd05621 189 CMKMDETGMVRCDTAVGTPDYIS 211 (370)
T ss_pred ceecccCCceecccCCCCcccCC
Confidence 99874433222334567777776
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-26 Score=242.16 Aligned_cols=152 Identities=22% Similarity=0.437 Sum_probs=136.9
Q ss_pred hCCCCccCccccCCeeeEEEEEeCC-CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
..+....+.+|-|-||.||.|.|.. ...||||.++.+....++|+.|..+|+.++|||+|+|+|+|.. +...|+|.||
T Consensus 266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~-EpPFYIiTEf 344 (1157)
T KOG4278|consen 266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH-EPPFYIITEF 344 (1157)
T ss_pred chheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhcc-CCCeEEEEec
Confidence 3456678899999999999999964 6789999999998889999999999999999999999999974 5678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|.+|+|.+||+++.+ ..+.---.+++|.||+.||+||... .+|||||.++|+|+.++.-+||+|||++|++
T Consensus 345 M~yGNLLdYLRecnr------~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 345 MCYGNLLDYLRECNR------SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred ccCccHHHHHHHhch------hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 999999999998764 3466667889999999999999988 8999999999999999999999999999998
Q ss_pred -CCC
Q 035786 670 -GDS 672 (693)
Q Consensus 670 -~~~ 672 (693)
+++
T Consensus 416 tgDT 419 (1157)
T KOG4278|consen 416 TGDT 419 (1157)
T ss_pred cCCc
Confidence 443
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-26 Score=230.84 Aligned_cols=160 Identities=20% Similarity=0.322 Sum_probs=138.2
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCH----HHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKK----ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~----~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
|...+.+|+|.||+|-+|.- ..|+.||||.+.+..... -.+.+||++|+.++||||+.++.+|- ..+...+|||
T Consensus 55 yE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFE-NkdKIvivME 133 (668)
T KOG0611|consen 55 YEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFE-NKDKIVIVME 133 (668)
T ss_pred HHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhc-CCceEEEEEE
Confidence 44456799999999999985 679999999997655442 35789999999999999999998774 4567889999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|..+|.|.+|+.++. .|+......+..||..|+.|.|.+ +++|||||-+|||||.++++||+|||+.-.
T Consensus 134 YaS~GeLYDYiSer~--------~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNl 202 (668)
T KOG0611|consen 134 YASGGELYDYISERG--------SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNL 202 (668)
T ss_pred ecCCccHHHHHHHhc--------cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhh
Confidence 999999999998654 488888889999999999999999 999999999999999999999999999998
Q ss_pred cCCCCcceeeeeehhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQ 687 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~ 687 (693)
+.+..- .+.+||+|.|-
T Consensus 203 y~~~kf--LqTFCGSPLYA 219 (668)
T KOG0611|consen 203 YADKKF--LQTFCGSPLYA 219 (668)
T ss_pred hccccH--HHHhcCCcccC
Confidence 855443 55688888884
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=237.47 Aligned_cols=165 Identities=21% Similarity=0.284 Sum_probs=139.4
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccc----cc--CHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCe
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLH----SF--KKESYMMELDLFSRVS-HARLVPLLGQCLEHETE 582 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~----~~--~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~ 582 (693)
.+.|...+.||+|+||+||.|.. .+|+.||||.++.. .. ..+...+|+.++++++ ||||++++.++.. ...
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t-~~~ 94 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT-PTK 94 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec-CCe
Confidence 44677788999999999999975 56899999977553 11 2345668999999999 9999999998865 457
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEEC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLG 661 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~ 661 (693)
.++||||+.+|+|.+++.... .+......++..|++.|++|+|.. +|+||||||+|||+|.+ +++||+
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g--------~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~ 163 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG--------RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLS 163 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC--------CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEe
Confidence 999999999999999998632 477788889999999999999998 99999999999999999 999999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++... .......+.+||+.|+|
T Consensus 164 DFG~s~~~~-~~~~~l~t~cGsp~Y~a 189 (370)
T KOG0583|consen 164 DFGLSAISP-GEDGLLKTFCGSPAYAA 189 (370)
T ss_pred ccccccccC-CCCCcccCCCCCcccCC
Confidence 999999874 22223556899999987
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-25 Score=231.66 Aligned_cols=163 Identities=21% Similarity=0.251 Sum_probs=133.7
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
|...+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++.+++|+||+++.+++.+ ++..++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~-~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET-KDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc-CCeEEEEEE
Confidence 56678999999999999986 5799999999864322 23468899999999999999999988765 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.+++..... ..+++.+...++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 81 ~~~~g~L~~~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~ 151 (285)
T cd05631 81 IMNGGDLKFHIYNMGN------PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQ 151 (285)
T ss_pred ecCCCcHHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEE
Confidence 9999999988864321 3589999999999999999999988 999999999999999999999999999987
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
...... .....|++.|+|
T Consensus 152 ~~~~~~--~~~~~g~~~y~a 169 (285)
T cd05631 152 IPEGET--VRGRVGTVGYMA 169 (285)
T ss_pred cCCCCe--ecCCCCCCCccC
Confidence 633221 122345555554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.3e-25 Score=234.52 Aligned_cols=158 Identities=18% Similarity=0.197 Sum_probs=132.0
Q ss_pred CccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 518 NLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
++||+|+||.||+++. .+|+.||||++..... ..+.+.+|++++++++||||+++.+++.. ++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT-HDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc-CCEEEEEEeCCCC
Confidence 3699999999999986 4689999999875321 23568889999999999999999988765 4678999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDS 672 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~ 672 (693)
|+|.+++... ..+++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~~L~~~l~~~--------~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~ 148 (323)
T cd05571 80 GELFFHLSRE--------RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD 148 (323)
T ss_pred CcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC
Confidence 9999998753 2488999999999999999999998 9999999999999999999999999999864222
Q ss_pred Ccceeeeeehhhhhhh
Q 035786 673 HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 673 ~~~~~~~~~~~~~y~a 688 (693)
... ....+||+.|+|
T Consensus 149 ~~~-~~~~~gt~~y~a 163 (323)
T cd05571 149 GAT-MKTFCGTPEYLA 163 (323)
T ss_pred CCc-ccceecCccccC
Confidence 111 233567777776
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-25 Score=238.65 Aligned_cols=146 Identities=16% Similarity=0.250 Sum_probs=128.2
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|+..+.||+|+||+||+|+.. +++.||||.+..... ..+.+.+|++++.+++|+|||++++++.+ +...++|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD-KLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCeEEEE
Confidence 35778889999999999999864 589999999965321 23568889999999999999999988765 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 80 ~E~~~gg~L~~~l~~~--------~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla 148 (363)
T cd05628 80 MEFLPGGDMMTLLMKK--------DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLC 148 (363)
T ss_pred EcCCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCc
Confidence 9999999999999753 2488999999999999999999988 9999999999999999999999999999
Q ss_pred ccc
Q 035786 667 HAQ 669 (693)
Q Consensus 667 ~~~ 669 (693)
+..
T Consensus 149 ~~~ 151 (363)
T cd05628 149 TGL 151 (363)
T ss_pred ccc
Confidence 865
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-25 Score=236.01 Aligned_cols=160 Identities=17% Similarity=0.210 Sum_probs=134.9
Q ss_pred CCCccCccccCCeeeEEEEEeCC--CcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG--GTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~--g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
+|...+.||+|+||.||+|+..+ +..||||++.... ...+.+.+|++++..++|||||++++++.+ ++..++|
T Consensus 31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~lv 109 (340)
T PTZ00426 31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD-ESYLYLV 109 (340)
T ss_pred hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe-CCEEEEE
Confidence 47778899999999999998643 4689999986432 224578899999999999999999999875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++... ..+++.....++.+++.||+|||.. +|+||||||+|||++.++++||+|||++
T Consensus 110 ~Ey~~~g~L~~~i~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a 178 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRN--------KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFA 178 (340)
T ss_pred EeCCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCC
Confidence 9999999999999753 2488999999999999999999988 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+...... ....||+.|+|
T Consensus 179 ~~~~~~~----~~~~gt~~y~a 196 (340)
T PTZ00426 179 KVVDTRT----YTLCGTPEYIA 196 (340)
T ss_pred eecCCCc----ceecCChhhcC
Confidence 8764322 22456666665
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-25 Score=238.70 Aligned_cols=145 Identities=18% Similarity=0.255 Sum_probs=128.2
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|+..+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++..++||||+++++++.+ ++..++||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv~ 80 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD-ENYLYLIM 80 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-CCeEEEEE
Confidence 5778899999999999999964 68999999996532 123568889999999999999999998875 46899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++... ..+++.....|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 81 E~~~~g~L~~~l~~~--------~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 149 (364)
T cd05599 81 EYLPGGDMMTLLMKK--------DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCT 149 (364)
T ss_pred CCCCCcHHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccce
Confidence 999999999999753 2488999999999999999999998 99999999999999999999999999987
Q ss_pred cc
Q 035786 668 AQ 669 (693)
Q Consensus 668 ~~ 669 (693)
.+
T Consensus 150 ~~ 151 (364)
T cd05599 150 GL 151 (364)
T ss_pred ec
Confidence 65
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.9e-25 Score=234.66 Aligned_cols=160 Identities=16% Similarity=0.231 Sum_probs=136.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+|+.. +|+.||||.+.... ...+.+.+|++++.+++|||||++++++.+ ++..++||
T Consensus 19 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~ 97 (329)
T PTZ00263 19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD-ENRVYFLL 97 (329)
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc-CCEEEEEE
Confidence 4677889999999999999975 58999999986532 224578999999999999999999998875 46899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++.... .+++.....++.|++.||+|||.. +|+||||||+|||+++++.+||+|||+++
T Consensus 98 e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 166 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG--------RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAK 166 (329)
T ss_pred cCCCCChHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCce
Confidence 9999999999997532 478888889999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
...+... ..+||+.|+|
T Consensus 167 ~~~~~~~----~~~gt~~y~a 183 (329)
T PTZ00263 167 KVPDRTF----TLCGTPEYLA 183 (329)
T ss_pred EcCCCcc----eecCChhhcC
Confidence 8743322 2467777775
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.2e-25 Score=233.22 Aligned_cols=158 Identities=18% Similarity=0.202 Sum_probs=131.5
Q ss_pred CccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 518 NLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
++||+|+||.||++.. .+|+.||||.+.... ...+.+.+|++++++++||||+++.+++.+ ++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT-KDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-CCEEEEEEeCCCC
Confidence 3699999999999986 468999999996532 124578899999999999999999987765 4688999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDS 672 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~ 672 (693)
|+|.+++... ..+++.+...++.|++.||+|||.. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 80 g~L~~~l~~~--------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~ 148 (328)
T cd05593 80 GELFFHLSRE--------RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD 148 (328)
T ss_pred CCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCc
Confidence 9999988643 2489999999999999999999988 9999999999999999999999999999864222
Q ss_pred Ccceeeeeehhhhhhh
Q 035786 673 HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 673 ~~~~~~~~~~~~~y~a 688 (693)
.. .....+||+.|+|
T Consensus 149 ~~-~~~~~~gt~~y~a 163 (328)
T cd05593 149 AA-TMKTFCGTPEYLA 163 (328)
T ss_pred cc-ccccccCCcCccC
Confidence 11 1233567777765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-25 Score=231.78 Aligned_cols=160 Identities=19% Similarity=0.216 Sum_probs=134.7
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++.+++||||+++++++.+ ++..++||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~ 80 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD-QRFLYMLM 80 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc-CCeEEEEE
Confidence 5677889999999999999975 68999999986432 224568899999999999999999988765 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++.. ..+++.....++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 81 e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~ 149 (291)
T cd05612 81 EYVPGGELFSYLRNS--------GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAK 149 (291)
T ss_pred eCCCCCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcch
Confidence 999999999999753 2488999999999999999999988 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
...+... ..+|++.|+|
T Consensus 150 ~~~~~~~----~~~gt~~y~a 166 (291)
T cd05612 150 KLRDRTW----TLCGTPEYLA 166 (291)
T ss_pred hccCCcc----cccCChhhcC
Confidence 7643221 2345666654
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-25 Score=238.36 Aligned_cols=163 Identities=20% Similarity=0.329 Sum_probs=136.2
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~l 585 (693)
.+|....++|+|+||+|+.+.+. +++.+|||.+++... ..+..+.|-+++.-. +||.++.+++ |+++++..|.
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~-~fQT~~~l~f 446 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFS-CFQTKEHLFF 446 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccc-ccccCCeEEE
Confidence 45888899999999999999985 578999999987543 245677788887766 5999999987 5556778999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+.+||+..+.+. ..++.++..-||..|+.||.|||++ +|||||||-.|||||.++.+||+|||+
T Consensus 447 vmey~~Ggdm~~~~~~---------~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGl 514 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHT---------DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGL 514 (694)
T ss_pred EEEecCCCcEEEEEec---------ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccc
Confidence 9999999997655553 3488888888999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|..--... ..+++||||.|||
T Consensus 515 cKe~m~~g~-~TsTfCGTpey~a 536 (694)
T KOG0694|consen 515 CKEGMGQGD-RTSTFCGTPEFLA 536 (694)
T ss_pred ccccCCCCC-ccccccCChhhcC
Confidence 998521122 2445999999998
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-25 Score=240.67 Aligned_cols=165 Identities=17% Similarity=0.187 Sum_probs=135.6
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.++|...+.||+|+||.||+++.. +++.||||.+.... ...+.|.+|+++++.++||||+++++++.+ ++..++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~-~~~~~l 120 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD-DKYLYM 120 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec-CCEEEE
Confidence 345788899999999999999864 68899999986432 123457899999999999999999987764 567899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++.. .++......++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 121 v~Ey~~gg~L~~~l~~~---------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~ 188 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY---------DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 188 (370)
T ss_pred EEcCCCCCcHHHHHHhc---------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccc
Confidence 99999999999998642 367777888999999999999988 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++.............+||+.|+|
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~a 211 (370)
T cd05596 189 CMKMDANGMVRCDTAVGTPDYIS 211 (370)
T ss_pred eeeccCCCcccCCCCCCCcCeEC
Confidence 98764332221223456777765
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.7e-25 Score=238.45 Aligned_cols=145 Identities=16% Similarity=0.213 Sum_probs=126.6
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.|...+.||+|+||+||+|+. .+++.||||++..... ..+.+.+|++++.+++|+|||++++++.+ ++..++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~-~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD-KDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec-CCEEEEEE
Confidence 467778999999999999986 4688999999965321 23578999999999999999999998875 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++.+.. .+++.....++.+++.||+|||.. +|+||||||+|||++.++.+||+|||+++
T Consensus 81 E~~~gg~L~~~l~~~~--------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~ 149 (381)
T cd05626 81 DYIPGGDMMSLLIRME--------VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCT 149 (381)
T ss_pred ecCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCc
Confidence 9999999999997532 478888888999999999999988 99999999999999999999999999986
Q ss_pred cc
Q 035786 668 AQ 669 (693)
Q Consensus 668 ~~ 669 (693)
..
T Consensus 150 ~~ 151 (381)
T cd05626 150 GF 151 (381)
T ss_pred cc
Confidence 43
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.7e-25 Score=232.87 Aligned_cols=165 Identities=19% Similarity=0.205 Sum_probs=137.8
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+++. .+|+.||||++..... ..+.+.+|++++..++|+||+++.+++.+ ++..++||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-~~~~~lv~ 80 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-KDNLYLVM 80 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec-CCeEEEEE
Confidence 577788999999999999986 4689999999975432 24568899999999999999999987765 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++.+.. ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 81 e~~~~~~L~~~l~~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~ 150 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-------DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAA 150 (330)
T ss_pred CCCCCCCHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCe
Confidence 9999999999997542 2488999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
..............||+.|+|
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~a 171 (330)
T cd05601 151 RLTANKMVNSKLPVGTPDYIA 171 (330)
T ss_pred ECCCCCceeeecccCCccccC
Confidence 874433322333456666665
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.9e-25 Score=231.31 Aligned_cols=156 Identities=19% Similarity=0.190 Sum_probs=130.3
Q ss_pred cccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 520 IKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 520 ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++.+++|||||+++++|.+ ++..++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS-PEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec-CCeEEEEEcCCCCCc
Confidence 799999999999974 58899999986432 224568899999999999999999988765 468899999999999
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCCCc
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQ 674 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~~~ 674 (693)
|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 80 L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 148 (312)
T cd05585 80 LFHHLQRE--------GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD 148 (312)
T ss_pred HHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC
Confidence 99999753 2488999999999999999999988 999999999999999999999999999987522211
Q ss_pred ceeeeeehhhhhhh
Q 035786 675 NVLTRFLWRQLYQS 688 (693)
Q Consensus 675 ~~~~~~~~~~~y~a 688 (693)
.....+||+.|+|
T Consensus 149 -~~~~~~gt~~y~a 161 (312)
T cd05585 149 -KTNTFCGTPEYLA 161 (312)
T ss_pred -ccccccCCcccCC
Confidence 1233557777765
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.2e-25 Score=231.95 Aligned_cols=158 Identities=18% Similarity=0.191 Sum_probs=130.4
Q ss_pred CccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 518 NLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
++||+|+||.||+++. .+|..||+|.+.... .....+.+|++++.+++||||+++++++.. ++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec-CCEEEEEEeCCCC
Confidence 3699999999999986 468999999986532 123467889999999999999999988765 4678999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDS 672 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~ 672 (693)
|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 80 ~~L~~~l~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 148 (323)
T cd05595 80 GELFFHLSRE--------RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 148 (323)
T ss_pred CcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCC
Confidence 9999888643 2489999999999999999999988 9999999999999999999999999998864222
Q ss_pred Ccceeeeeehhhhhhh
Q 035786 673 HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 673 ~~~~~~~~~~~~~y~a 688 (693)
... .....||+.|+|
T Consensus 149 ~~~-~~~~~gt~~y~a 163 (323)
T cd05595 149 GAT-MKTFCGTPEYLA 163 (323)
T ss_pred CCc-cccccCCcCcCC
Confidence 111 223456666665
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.3e-26 Score=221.50 Aligned_cols=169 Identities=19% Similarity=0.285 Sum_probs=140.5
Q ss_pred CCCccCccccCCeeeEEEEEeCC-----CcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG-----GTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~-----g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
.|.....||+|.||.||||.-.+ ...+|+|+++..+.. ..+..+||.++++++|||||.|..++.+.+..++
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence 36667789999999999997532 237999999754322 4568899999999999999999998887667899
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC----CceEE
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK----FEVRL 660 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~----~~~ki 660 (693)
|++||.+. ||...++-++... .+.+.......|.-||..|++|||++ -|+||||||+|||+..+ +.+||
T Consensus 105 l~fdYAEh-DL~~II~fHr~~~---~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 105 LLFDYAEH-DLWHIIKFHRASK---AKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred EEehhhhh-hHHHHHHHhccch---hccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 99999997 8998887554321 24688888999999999999999999 89999999999999877 89999
Q ss_pred CCcccccccCCCCcce--eeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNV--LTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~--~~~~~~~~~y~a 688 (693)
+|||+||++.+...+. ...+++|-||+|
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRA 207 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRA 207 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecC
Confidence 9999999986654442 445889999998
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-24 Score=226.03 Aligned_cols=155 Identities=15% Similarity=0.283 Sum_probs=129.6
Q ss_pred ccCHHHHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEE
Q 035786 501 SFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQC 576 (693)
Q Consensus 501 ~~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~ 576 (693)
.++.+++ +......||+|++|.||+|++ +|+.||||++...... .+.|.+|+++|.+++|||||+++|+|
T Consensus 14 ~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~ 87 (283)
T PHA02988 14 CIESDDI-----DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFI 87 (283)
T ss_pred ecCHHHc-----CCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeE
Confidence 3455555 223346899999999999998 5889999999754333 35788999999999999999999998
Q ss_pred Ec--C-CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC
Q 035786 577 LE--H-ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD 653 (693)
Q Consensus 577 ~~--~-~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld 653 (693)
.+ . ....++||||+++|+|.++++.. ..++|.++.+++.+++.|++|||... +++||||||+|||++
T Consensus 88 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--------~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~ 157 (283)
T PHA02988 88 IDIVDDLPRLSLILEYCTRGYLREVLDKE--------KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVT 157 (283)
T ss_pred EecccCCCceEEEEEeCCCCcHHHHHhhC--------CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEEC
Confidence 75 2 23578999999999999999753 24899999999999999999999632 577999999999999
Q ss_pred CCCceEECCcccccccCC
Q 035786 654 DKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 654 ~~~~~ki~Dfgla~~~~~ 671 (693)
+++.+||+|||+++....
T Consensus 158 ~~~~~kl~dfg~~~~~~~ 175 (283)
T PHA02988 158 ENYKLKIICHGLEKILSS 175 (283)
T ss_pred CCCcEEEcccchHhhhcc
Confidence 999999999999997643
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-25 Score=242.51 Aligned_cols=164 Identities=20% Similarity=0.286 Sum_probs=136.0
Q ss_pred CCccCccccCCeeeEEEEEe-CCC----cEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGG----TTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g----~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
+....+||+|+||.||||.| +.| .+||+|.+...... .++|.+|+-+|++++|||+++|+|+|..+ ...||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s--~~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS--TLQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc--hHHHH
Confidence 34568999999999999996 554 47999998765443 57899999999999999999999999853 58899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
.+|||.|+|.+|++..+ ..+.-...+.+..|||+||.|||.+ +++||||.++|||+.+-..+||.|||+|
T Consensus 776 tq~mP~G~LlDyvr~hr-------~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla 845 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHR-------DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLA 845 (1177)
T ss_pred HHhcccchHHHHHHHhh-------ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchh
Confidence 99999999999998754 3588888999999999999999988 9999999999999999999999999999
Q ss_pred cccC-CCCcceeeeeehhhhhhhh
Q 035786 667 HAQG-DSHQNVLTRFLWRQLYQSC 689 (693)
Q Consensus 667 ~~~~-~~~~~~~~~~~~~~~y~a~ 689 (693)
+... +...+....-....-||||
T Consensus 846 ~ll~~d~~ey~~~~gK~pikwmal 869 (1177)
T KOG1025|consen 846 KLLAPDEKEYSAPGGKVPIKWMAL 869 (1177)
T ss_pred hccCcccccccccccccCcHHHHH
Confidence 9983 2222222223344556665
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=224.53 Aligned_cols=146 Identities=20% Similarity=0.352 Sum_probs=127.6
Q ss_pred CCCccCccccCCeeeEEEEEeC----CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA----GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~----~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
+|...++||+|+||.||+|.+. .+..||+|.++..... .+.|.+|++++.+++|||||+++|++.. ++..++|
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 84 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR-GNTMMIV 84 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec-CCCcEEE
Confidence 4677789999999999999863 3578999998754322 4579999999999999999999998875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... ..++|.++..++.+++.||+|||+. +++||||||+||+++.++.+|++|||.+
T Consensus 85 ~e~~~~~~L~~~l~~~~-------~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~ 154 (266)
T cd05064 85 TEYMSNGALDSFLRKHE-------GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRL 154 (266)
T ss_pred EEeCCCCcHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccc
Confidence 99999999999997532 2589999999999999999999988 9999999999999999999999999987
Q ss_pred ccc
Q 035786 667 HAQ 669 (693)
Q Consensus 667 ~~~ 669 (693)
...
T Consensus 155 ~~~ 157 (266)
T cd05064 155 QED 157 (266)
T ss_pred ccc
Confidence 664
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=230.39 Aligned_cols=146 Identities=23% Similarity=0.397 Sum_probs=127.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCc----EEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGT----TVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~----~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|+..+.||+|+||.||+|++. +|+ .||||++..... ..++|.+|+++++.++||||++++|+|.. ...++
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~--~~~~~ 85 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQL 85 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC--CCcee
Confidence 4788899999999999999863 344 489999865332 25679999999999999999999999975 35789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|+||+++|+|.++++... ..+++...++++.||+.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 86 v~e~~~~g~l~~~l~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~ 155 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGL 155 (316)
T ss_pred eeecCCCCCHHHHHHhcc-------ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccc
Confidence 999999999999997532 2488999999999999999999988 999999999999999999999999999
Q ss_pred ccccC
Q 035786 666 LHAQG 670 (693)
Q Consensus 666 a~~~~ 670 (693)
++...
T Consensus 156 a~~~~ 160 (316)
T cd05108 156 AKLLG 160 (316)
T ss_pred ccccc
Confidence 99864
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=222.01 Aligned_cols=145 Identities=21% Similarity=0.365 Sum_probs=130.2
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
|...+.||+|+||.||+|++.++..+|+|.+.......++|.+|++++++++||||++++++|.+ +...++||||+++|
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~iv~e~~~~~ 84 (256)
T cd05114 6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQ-QKPLYIVTEFMENG 84 (256)
T ss_pred cEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEcc-CCCEEEEEEcCCCC
Confidence 56677899999999999999888899999987655556789999999999999999999998865 46789999999999
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+|.++++... ..++|..+..++.+++.||+|||+. +|+||||||+||++++++.+|++|||+++..
T Consensus 85 ~L~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~ 150 (256)
T cd05114 85 CLLNYLRQRQ-------GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYV 150 (256)
T ss_pred cHHHHHHhCc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcccc
Confidence 9999997532 2489999999999999999999988 8999999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.7e-25 Score=236.43 Aligned_cols=170 Identities=16% Similarity=0.174 Sum_probs=139.6
Q ss_pred HHHHHhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 035786 506 QLLRATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHE 580 (693)
Q Consensus 506 ~l~~at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~ 580 (693)
++....++|...+.||+|+||.||+++.. +++.||+|.+.... ...+.+.+|++++..++||||+++++++.+ +
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~-~ 115 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD-D 115 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-C
Confidence 34445577889999999999999999975 58899999986422 123468899999999999999999988765 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
...++||||+++|+|.+++... .++......++.+++.||+|||+. +|+||||||+|||+++++++||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~---------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL 183 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY---------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKL 183 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc---------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEE
Confidence 6789999999999999998642 367788888999999999999988 9999999999999999999999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++.............+||+.|+|
T Consensus 184 ~DfG~a~~~~~~~~~~~~~~~gt~~y~a 211 (371)
T cd05622 184 ADFGTCMKMNKEGMVRCDTAVGTPDYIS 211 (371)
T ss_pred EeCCceeEcCcCCcccccCcccCccccC
Confidence 9999998874332222234557777765
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.9e-25 Score=233.08 Aligned_cols=160 Identities=18% Similarity=0.237 Sum_probs=134.9
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+|+.. +|+.||||++..... ..+.+.+|++++..++||||+++++++.+ ++..++||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-~~~~~lv~ 80 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD-DEYLYLAM 80 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc-CCEEEEEE
Confidence 5777889999999999999975 589999999975321 24578899999999999999999998865 46899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++.. ..+++.+...++.+++.||+|||.. +|+||||||+||++++++.+||+|||+++
T Consensus 81 e~~~g~~L~~~l~~~--------~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~ 149 (333)
T cd05600 81 EYVPGGDFRTLLNNL--------GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSK 149 (333)
T ss_pred eCCCCCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCc
Confidence 999999999999753 2488999999999999999999988 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
..... ....+||+.|+|
T Consensus 150 ~~~~~----~~~~~gt~~y~a 166 (333)
T cd05600 150 GIVTY----ANSVVGSPDYMA 166 (333)
T ss_pred ccccc----cCCcccCccccC
Confidence 76331 122445555554
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=229.10 Aligned_cols=158 Identities=18% Similarity=0.201 Sum_probs=129.6
Q ss_pred CccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 518 NLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
++||+|+||.||+++. .+|+.||||.+..... ..+.+.+|++++.+++||||+++.+++.. +...++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-HDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc-CCEEEEEEeCCCC
Confidence 3699999999999985 4689999999875321 23567889999999999999999987765 4678999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc-CCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH-ECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~-~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
|+|.+++... ..+++.+...++.|++.||+|||+ . +|+||||||+|||+++++.+||+|||+++....
T Consensus 80 ~~L~~~l~~~--------~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~ 148 (325)
T cd05594 80 GELFFHLSRE--------RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 148 (325)
T ss_pred CcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCC
Confidence 9999988643 248999999999999999999996 5 899999999999999999999999999886422
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
.... .....||+.|+|
T Consensus 149 ~~~~-~~~~~gt~~y~a 164 (325)
T cd05594 149 DGAT-MKTFCGTPEYLA 164 (325)
T ss_pred CCcc-cccccCCcccCC
Confidence 1111 223456666665
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=236.14 Aligned_cols=145 Identities=17% Similarity=0.229 Sum_probs=126.7
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||++.. .+|+.||||++..... ..+.+.+|++++.+++|||||++++++.+ +...++||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-~~~~~lv~ 80 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-AQYLYLIM 80 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc-CCeeEEEE
Confidence 577788999999999999986 4689999999864321 23568899999999999999999998875 46899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+|++|||+++
T Consensus 81 E~~~gg~L~~~l~~~--------~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~ 149 (377)
T cd05629 81 EFLPGGDLMTMLIKY--------DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLST 149 (377)
T ss_pred eCCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccc
Confidence 999999999999753 2478888888999999999999988 99999999999999999999999999997
Q ss_pred cc
Q 035786 668 AQ 669 (693)
Q Consensus 668 ~~ 669 (693)
..
T Consensus 150 ~~ 151 (377)
T cd05629 150 GF 151 (377)
T ss_pred cc
Confidence 43
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-24 Score=230.72 Aligned_cols=165 Identities=19% Similarity=0.199 Sum_probs=136.1
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+++.. +++.||||.+.... ...+.|.+|+.++..++|+||+++++++.+ ++..++||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~ 80 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-ENNLYLVM 80 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec-CCeEEEEE
Confidence 5777889999999999999964 58999999986422 124568899999999999999999988765 46899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++.+.. ..+++.+...++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 81 e~~~g~~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 150 (331)
T cd05597 81 DYYVGGDLLTLLSKFE-------DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCL 150 (331)
T ss_pred ecCCCCcHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCcee
Confidence 9999999999996532 2488889999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
..............||+.|+|
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~a 171 (331)
T cd05597 151 RLLADGTVQSNVAVGTPDYIS 171 (331)
T ss_pred ecCCCCCccccceeccccccC
Confidence 764333222233456666655
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-24 Score=231.08 Aligned_cols=165 Identities=18% Similarity=0.181 Sum_probs=136.2
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+++.. +++.||||.+.... ...+.|.+|+.++..++|+||+++.+++.+ ++..++||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~-~~~~~lv~ 80 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD-ENYLYLVM 80 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCEEEEEE
Confidence 5777889999999999999964 58899999986422 123458889999999999999999988765 56889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 81 Ey~~gg~L~~~l~~~~-------~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~ 150 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-------DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCL 150 (331)
T ss_pred eCCCCCcHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecccee
Confidence 9999999999997532 2488889999999999999999988 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
.............+||+.|+|
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~a 171 (331)
T cd05624 151 KMNQDGTVQSSVAVGTPDYIS 171 (331)
T ss_pred eccCCCceeeccccCCcccCC
Confidence 764433222233456666655
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-24 Score=235.78 Aligned_cols=154 Identities=27% Similarity=0.381 Sum_probs=128.6
Q ss_pred CCCccCccccCCeeeEEEEEe------CCCcEEEEEEeccccc--CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 513 NFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSF--KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
+|...+.||+|+||.||+|+. .++..||||+++.... ..+.+.+|++++..+ +|||||+++|+|.+ .+..
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-~~~~ 114 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV-GGPT 114 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc-CCcc
Confidence 467778999999999999973 2356899999864332 245789999999999 89999999999976 4678
Q ss_pred EEEEccCCCCChhhhhhccCCCC---------------------------------------------------------
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLE--------------------------------------------------------- 606 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~--------------------------------------------------------- 606 (693)
++||||+++|+|.++++......
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 99999999999999997532100
Q ss_pred ----------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 607 ----------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 607 ----------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
......++|..+.+++.+|++||+|||+. +|+||||||+|||++++..+||+|||+++...
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 00113589999999999999999999987 99999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=230.97 Aligned_cols=165 Identities=19% Similarity=0.202 Sum_probs=135.1
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+++.. +++.||+|.+.... ...+.|.+|+.++..++|+||+++.+++.+ ++..++||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~ 80 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD-ENNLYLVM 80 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec-CCEEEEEE
Confidence 5777889999999999999975 47889999986422 123458899999999999999999987764 56889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++++.. ..+++.....++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 81 ey~~~g~L~~~l~~~~-------~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~ 150 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-------DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCL 150 (332)
T ss_pred eccCCCcHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchhe
Confidence 9999999999997532 2488999999999999999999988 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
.............+||+.|+|
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~a 171 (332)
T cd05623 151 KLMEDGTVQSSVAVGTPDYIS 171 (332)
T ss_pred ecccCCcceecccccCccccC
Confidence 753322222223456666654
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-24 Score=222.16 Aligned_cols=149 Identities=19% Similarity=0.375 Sum_probs=132.5
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|...++..||+|++.......+.|.+|++++++++|+||+++++++.+ ++..++||||+++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~ 85 (261)
T cd05072 7 SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK-EEPIYIITEYMAK 85 (261)
T ss_pred HeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCCcEEEEecCCC
Confidence 467778999999999999998888899999987655556789999999999999999999998765 4678999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
|+|.++++.... ..+++.++..++.+++.|++|||+. +++||||||+||++++++.+|++|||+++...+
T Consensus 86 ~~L~~~l~~~~~------~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 86 GSLLDFLKSDEG------GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred CcHHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCC
Confidence 999999975322 3589999999999999999999987 899999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=235.67 Aligned_cols=144 Identities=16% Similarity=0.207 Sum_probs=125.7
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.|...+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|++++++++|+|||++++++.+ ++..++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~-~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD-KDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe-CCEEEEEE
Confidence 467788999999999999986 4688999999865321 24578899999999999999999998875 46899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
|||++|+|.+++.+.. .++......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 81 E~~~gg~L~~~l~~~~--------~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~ 149 (382)
T cd05625 81 DYIPGGDMMSLLIRMG--------IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCT 149 (382)
T ss_pred eCCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCc
Confidence 9999999999997532 377778888999999999999988 89999999999999999999999999976
Q ss_pred c
Q 035786 668 A 668 (693)
Q Consensus 668 ~ 668 (693)
.
T Consensus 150 ~ 150 (382)
T cd05625 150 G 150 (382)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-24 Score=235.48 Aligned_cols=153 Identities=25% Similarity=0.399 Sum_probs=128.1
Q ss_pred CCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 513 NFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
+|...+.||+|+||.||+|+. .++..||||++...... .+.+.+|+++++++ +|+|||+++|+|.+ ....
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-~~~~ 117 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH-GGPV 117 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC-CCCe
Confidence 577788999999999999874 23458999999753322 45788999999999 89999999999876 4678
Q ss_pred EEEEccCCCCChhhhhhccCCC----------------------------------------------------------
Q 035786 584 LLVYKYMVCGDLASSLHRVTDL---------------------------------------------------------- 605 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~---------------------------------------------------------- 605 (693)
++||||+++|+|.++++.....
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 9999999999999999643210
Q ss_pred ----CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 606 ----EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 606 ----~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
.......++|.+..+|+.||+.||+|||+. +|+||||||+||+++++..+||+|||+++..
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~ 262 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDI 262 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeec
Confidence 001123589999999999999999999987 9999999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-24 Score=229.26 Aligned_cols=163 Identities=19% Similarity=0.161 Sum_probs=134.0
Q ss_pred CCccCccccCCeeeEEEEEe----CCCcEEEEEEecccc-----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 514 FSETNLIKKGHSGDLFKGTL----AGGTTVVVKKVSLHS-----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
|...+.||+|+||.||+++. .+|+.||+|.+.... ...+.+.+|++++.++ +|+||+++++++.+ ++..
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~~ 80 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT-EAKL 80 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec-CCEE
Confidence 56678899999999999875 357899999986422 1235688899999999 58999999987754 5678
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++||||+++|+|.+++... ..+++.+...++.+++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Df 149 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--------DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDF 149 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeC
Confidence 9999999999999999753 2488999999999999999999988 8999999999999999999999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+++.............+||+.|+|
T Consensus 150 G~~~~~~~~~~~~~~~~~gt~~y~a 174 (332)
T cd05614 150 GLSKEFLSEEKERTYSFCGTIEYMA 174 (332)
T ss_pred cCCccccccCCCccccccCCccccC
Confidence 9998763332222334567777765
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-24 Score=223.75 Aligned_cols=145 Identities=23% Similarity=0.369 Sum_probs=125.8
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|...+.||+|+||.||+|... ++..||+|++..... ..+.+.+|++++++++||||+++++++.. +...++||||
T Consensus 6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~ 84 (288)
T cd07871 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT-ERCLTLVFEY 84 (288)
T ss_pred cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC-CCeEEEEEeC
Confidence 4777889999999999999864 688999999864322 24568899999999999999999998865 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++ |+|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 85 ~~-~~l~~~l~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~ 153 (288)
T cd07871 85 LD-SDLKQYLDNCG-------NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAK 153 (288)
T ss_pred CC-cCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeec
Confidence 98 59999886432 2478999999999999999999988 9999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-24 Score=233.87 Aligned_cols=144 Identities=17% Similarity=0.208 Sum_probs=125.6
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+|+. .+++.||||.+.... ...+.+.+|++++.+++|+||+++++++.+ ++..++||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-KDNLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc-CCEEEEEE
Confidence 577788999999999999986 458999999986432 224568899999999999999999998875 46899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++.... .++......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 81 E~~~~g~L~~~i~~~~--------~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~ 149 (376)
T cd05598 81 DYIPGGDMMSLLIRLG--------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCT 149 (376)
T ss_pred eCCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence 9999999999997532 377788888999999999999988 99999999999999999999999999985
Q ss_pred c
Q 035786 668 A 668 (693)
Q Consensus 668 ~ 668 (693)
.
T Consensus 150 ~ 150 (376)
T cd05598 150 G 150 (376)
T ss_pred c
Confidence 3
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-24 Score=226.40 Aligned_cols=158 Identities=20% Similarity=0.246 Sum_probs=131.7
Q ss_pred CccccCCeeeEEEEEe----CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 518 NLIKKGHSGDLFKGTL----AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~----~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
+.||+|+||.||+++. .+|+.||||++..... ....+.+|++++.+++|||||++++++.+ ++..++||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT-EGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc-CCEEEEEEcCC
Confidence 5799999999999874 3588999999975332 23467889999999999999999998865 46889999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.+++++. ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 81 ~~~~L~~~l~~~--------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 81 RGGDLFTRLSKE--------VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESI 149 (318)
T ss_pred CCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccC
Confidence 999999998643 3489999999999999999999988 99999999999999999999999999998764
Q ss_pred CCCcceeeeeehhhhhhh
Q 035786 671 DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~~~~~~~~~~y~a 688 (693)
..... .....|++.|+|
T Consensus 150 ~~~~~-~~~~~g~~~y~a 166 (318)
T cd05582 150 DHEKK-AYSFCGTVEYMA 166 (318)
T ss_pred CCCCc-eecccCChhhcC
Confidence 33221 223557777765
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-24 Score=234.59 Aligned_cols=154 Identities=25% Similarity=0.393 Sum_probs=128.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCC-CCCccceeEEEEcCCCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVS-HARLVPLLGQCLEHETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~ 582 (693)
..|...++||+|+||.||+|+.. .+..||||++...... .+.|.+|++++++++ |||||+++|+|.+ ...
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~-~~~ 115 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-SGP 115 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc-CCc
Confidence 45677789999999999999852 1357999999653322 467999999999996 9999999999875 467
Q ss_pred eEEEEccCCCCChhhhhhccCCCC--------------------------------------------------------
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLE-------------------------------------------------------- 606 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~-------------------------------------------------------- 606 (693)
.++||||+++|+|.++|+......
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999999997532100
Q ss_pred --------------------------------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC
Q 035786 607 --------------------------------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD 654 (693)
Q Consensus 607 --------------------------------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~ 654 (693)
......++|.++.+++.|+++||+|||+. +|+||||||+||++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeC
Confidence 00113589999999999999999999988 9999999999999999
Q ss_pred CCceEECCccccccc
Q 035786 655 KFEVRLGSLSELHAQ 669 (693)
Q Consensus 655 ~~~~ki~Dfgla~~~ 669 (693)
++.+||+|||+++..
T Consensus 273 ~~~~kL~DfGla~~~ 287 (400)
T cd05105 273 GKIVKICDFGLARDI 287 (400)
T ss_pred CCEEEEEeCCcceec
Confidence 999999999999876
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-24 Score=231.84 Aligned_cols=158 Identities=19% Similarity=0.276 Sum_probs=128.5
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
|...+.||+|+||.||+|+.. +|+.||||.+...... .+.|.+|++++++++|+|||++++++.+ ++..++||||+
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~ 154 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH-NGEIQVLLEFM 154 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-CCeEEEEEecC
Confidence 445578999999999999964 6899999998643322 4679999999999999999999998865 46889999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.+.. ..++.....++.+++.||+|||.. +|+||||||+|||+++++.+||+|||+++...
T Consensus 155 ~~~~L~~~~------------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 155 DGGSLEGTH------------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILA 219 (353)
T ss_pred CCCcccccc------------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecc
Confidence 999986432 256777888999999999999988 99999999999999999999999999998764
Q ss_pred CCCcceeeeeehhhhhhh
Q 035786 671 DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~~~~~~~~~~y~a 688 (693)
..... .....||.+|+|
T Consensus 220 ~~~~~-~~~~~gt~~y~a 236 (353)
T PLN00034 220 QTMDP-CNSSVGTIAYMS 236 (353)
T ss_pred ccccc-ccccccCccccC
Confidence 32211 122345666654
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-24 Score=234.75 Aligned_cols=163 Identities=21% Similarity=0.327 Sum_probs=136.3
Q ss_pred ccCccccCCeeeEEEEE-eCCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcC-----CCeeEEEE
Q 035786 516 ETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEH-----ETEKLLVY 587 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~~~lv~ 587 (693)
..+.+|+|+||.||+|+ -..|+.||||....... .++.+.+|+++|++++|+|||++++.=-+. .....+||
T Consensus 17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm 96 (732)
T KOG4250|consen 17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM 96 (732)
T ss_pred ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence 34679999999999999 56799999998875432 367899999999999999999998742111 12467999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC--CCCc--eEECCc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD--DKFE--VRLGSL 663 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld--~~~~--~ki~Df 663 (693)
|||.+|||+..|.+... ..-|+..+.+.+..+++.||.|||++ +|+||||||.||++- ++++ =|++||
T Consensus 97 EyC~gGsL~~~L~~PEN-----~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDf 168 (732)
T KOG4250|consen 97 EYCSGGSLRKVLNSPEN-----AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDF 168 (732)
T ss_pred eecCCCcHHHHhcCccc-----ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecc
Confidence 99999999999986443 24599999999999999999999988 999999999999985 4443 699999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|.||.+.+... .+.++||+.|.|
T Consensus 169 G~Arel~d~s~--~~S~vGT~~YLh 191 (732)
T KOG4250|consen 169 GAARELDDNSL--FTSLVGTEEYLH 191 (732)
T ss_pred cccccCCCCCe--eeeecCchhhcC
Confidence 99999976664 788999999976
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-24 Score=226.69 Aligned_cols=158 Identities=18% Similarity=0.219 Sum_probs=129.9
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||.||+|+.. +++.||||.++.... ..+.+.+|+.++.++ +|||||++++++.+ ++..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~-~~~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT-ESRLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc-CCEEEEEEeCCC
Confidence 36999999999999864 688999999975322 134578899999998 79999999998765 468899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 80 ~g~L~~~~~~~--------~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 148 (329)
T cd05588 80 GGDLMFHMQRQ--------RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR 148 (329)
T ss_pred CCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccccc
Confidence 99999988643 2489999999999999999999988 999999999999999999999999999885321
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
... .....+||+.|+|
T Consensus 149 ~~~-~~~~~~gt~~y~a 164 (329)
T cd05588 149 PGD-TTSTFCGTPNYIA 164 (329)
T ss_pred CCC-ccccccCCccccC
Confidence 111 1223556666665
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-24 Score=226.81 Aligned_cols=158 Identities=20% Similarity=0.214 Sum_probs=128.5
Q ss_pred CccccCCeeeEEEEEe----CCCcEEEEEEecccc-----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 518 NLIKKGHSGDLFKGTL----AGGTTVVVKKVSLHS-----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+.||+|+||.||+++. .+++.||||.+.... .....+.+|++++.+++||||+++++++.. ++..++|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT-GGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec-CCeEEEEEe
Confidence 5799999999999985 357899999986532 123467889999999999999999998865 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.+++... ..+.+.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 81 ~~~~~~L~~~~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 149 (323)
T cd05584 81 YLSGGELFMHLERE--------GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKE 149 (323)
T ss_pred CCCCchHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCee
Confidence 99999999998653 2377888888999999999999988 999999999999999999999999999886
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
....... .....||+.|+|
T Consensus 150 ~~~~~~~-~~~~~gt~~y~a 168 (323)
T cd05584 150 SIHEGTV-THTFCGTIEYMA 168 (323)
T ss_pred cccCCCc-ccccCCCccccC
Confidence 4221111 122446666654
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-24 Score=229.12 Aligned_cols=163 Identities=17% Similarity=0.261 Sum_probs=131.2
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCC----CeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHE----TEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~~l 585 (693)
|...+.||+|+||.||+|+. .+|..||||++..... ....+.+|++++++++|||||++++++.... ...++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 55678899999999999986 4689999999864221 2356889999999999999999999886432 24789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|||||+ ++|.+++... ..++|.....++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 82 v~e~~~-~~L~~~l~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~ 149 (338)
T cd07859 82 VFELME-SDLHQVIKAN--------DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGL 149 (338)
T ss_pred EEecCC-CCHHHHHHhc--------ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcc
Confidence 999996 6899988643 2489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCC--Ccceeeeeehhhhhhh
Q 035786 666 LHAQGDS--HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~--~~~~~~~~~~~~~y~a 688 (693)
++..... .....+...+|++|+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~t~~y~a 174 (338)
T cd07859 150 ARVAFNDTPTAIFWTDYVATRWYRA 174 (338)
T ss_pred ccccccccCccccccCCCCCCCcCC
Confidence 9875221 1111233456666655
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-24 Score=231.16 Aligned_cols=147 Identities=20% Similarity=0.260 Sum_probs=129.6
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++..++|+||+++++++.+ ++..++||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~ 80 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD-EEHLYLVM 80 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec-CCeEEEEE
Confidence 5777889999999999999975 68999999997532 224578899999999999999999988765 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++... ..+++.....++.|++.||+|||.. +|+||||||+||++++++.+||+|||+++
T Consensus 81 e~~~~~~L~~~l~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~ 149 (350)
T cd05573 81 EYMPGGDLMNLLIRK--------DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCK 149 (350)
T ss_pred cCCCCCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCc
Confidence 999999999999753 2488999999999999999999987 99999999999999999999999999998
Q ss_pred ccCC
Q 035786 668 AQGD 671 (693)
Q Consensus 668 ~~~~ 671 (693)
....
T Consensus 150 ~~~~ 153 (350)
T cd05573 150 KMNK 153 (350)
T ss_pred cCcc
Confidence 7643
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.4e-25 Score=198.23 Aligned_cols=162 Identities=20% Similarity=0.300 Sum_probs=133.4
Q ss_pred CCccCccccCCeeeEEEEE-eCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|+..+.||+|.||+||||+ ++.++.||+|++..+... ..+..+||.+++.++|+|||+++...- ++...-||+||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlh-sdkkltlvfe~ 82 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-SDKKLTLVFEF 82 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc-cCceeEEeHHH
Confidence 4456789999999999998 456899999998654322 467899999999999999999998654 34567799999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+.. +|..|..... ..++......++.|+.+||.|.|++ .++|||+||.|.|++.+++.|++|||+||..
T Consensus 83 cdq-dlkkyfdsln-------g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglaraf 151 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLN-------GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAF 151 (292)
T ss_pred hhH-HHHHHHHhcC-------CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhc
Confidence 976 8888876543 3488888899999999999999998 8999999999999999999999999999998
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
+-...... ..+.|.||+.
T Consensus 152 gipvrcys-aevvtlwyrp 169 (292)
T KOG0662|consen 152 GIPVRCYS-AEVVTLWYRP 169 (292)
T ss_pred CCceEeee-ceeeeeeccC
Confidence 65544322 3456777753
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.1e-24 Score=218.27 Aligned_cols=149 Identities=19% Similarity=0.361 Sum_probs=133.3
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|...+++.||||.+.......++|.+|++++++++|+||+++++++.. ++..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 84 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTL-EEPIYIVTELMK 84 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEec-CCCeeeeeeccc
Confidence 4577788999999999999998778899999997666567789999999999999999999998875 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|+|.+++.... ...++|.++.+++.+++.|++|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 85 ~~~L~~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 154 (261)
T cd05068 85 YGSLLEYLQGGA------GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIK 154 (261)
T ss_pred CCcHHHHHhccC------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEcc
Confidence 999999997532 13589999999999999999999988 89999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-24 Score=226.39 Aligned_cols=158 Identities=20% Similarity=0.235 Sum_probs=128.6
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||.||+|+.. +++.||+|.+..... ..+.+.+|+.++.++ +|||||++++++.+ ++..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFFVIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-CCEEEEEEeCCC
Confidence 46999999999999964 588999999875322 134577899988877 89999999998765 468899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 80 ~~~L~~~~~~~--------~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~ 148 (329)
T cd05618 80 GGDLMFHMQRQ--------RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 148 (329)
T ss_pred CCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccC
Confidence 99999888643 2488999999999999999999988 999999999999999999999999999986422
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
.... ....+||+.|+|
T Consensus 149 ~~~~-~~~~~gt~~y~a 164 (329)
T cd05618 149 PGDT-TSTFCGTPNYIA 164 (329)
T ss_pred CCCc-cccccCCccccC
Confidence 1111 223456666654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.3e-24 Score=223.39 Aligned_cols=164 Identities=20% Similarity=0.327 Sum_probs=132.9
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... ...+.+|++++++++|||||++++++.+ +...++|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e 83 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHT-KETLTLVFE 83 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEec-CCeEEEEEE
Confidence 45778889999999999999975 6899999998653322 3467889999999999999999998875 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|++ |+|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 84 ~~~-~~l~~~~~~~~-------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 152 (303)
T cd07869 84 YVH-TDLCQYMDKHP-------GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARA 152 (303)
T ss_pred CCC-cCHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCccee
Confidence 996 68888886432 2478889999999999999999988 999999999999999999999999999986
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
....... .....++++|+|
T Consensus 153 ~~~~~~~-~~~~~~~~~y~a 171 (303)
T cd07869 153 KSVPSHT-YSNEVVTLWYRP 171 (303)
T ss_pred ccCCCcc-CCCCcccCCCCC
Confidence 5322111 222345555554
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.8e-24 Score=223.04 Aligned_cols=164 Identities=16% Similarity=0.227 Sum_probs=133.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+|...+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|++++.+++||||++++++|.+ ++..++|||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 80 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR-RGKLYLVFE 80 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec-CCEEEEEEe
Confidence 5777889999999999999975 588999999865322 24678899999999999999999998865 468899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|.+..+.... ..+++.....++.|++.||+|||.. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~~~~~~l~~~~~~~--------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~ 149 (287)
T cd07848 81 YVEKNMLELLEEMP--------NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARN 149 (287)
T ss_pred cCCCCHHHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccc
Confidence 99998776544321 3488999999999999999999987 999999999999999999999999999988
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
.............+++.|+|
T Consensus 150 ~~~~~~~~~~~~~~~~~y~a 169 (287)
T cd07848 150 LSEGSNANYTEYVATRWYRS 169 (287)
T ss_pred ccccccccccccccccccCC
Confidence 64332222233455666654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.9e-24 Score=224.35 Aligned_cols=148 Identities=19% Similarity=0.255 Sum_probs=127.0
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
..++|+...+||+|+||.||.|+-+ +|..+|+|++++... +.+..+.|-.+|...++|.||+|+-.| +.....|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-QD~~~LY 217 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-QDKEYLY 217 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe-cCCCeeE
Confidence 3467888999999999999999864 599999999976442 246788999999999999999998544 4457899
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
|||||+||||+..+|.+.. .|+......++.+.+.|++-||.. ++|||||||.|+|||..|.+|++|||
T Consensus 218 LiMEylPGGD~mTLL~~~~--------~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFG 286 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKD--------TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFG 286 (550)
T ss_pred EEEEecCCccHHHHHHhcC--------cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeecccc
Confidence 9999999999999997643 366666666777889999999998 99999999999999999999999999
Q ss_pred ccccc
Q 035786 665 ELHAQ 669 (693)
Q Consensus 665 la~~~ 669 (693)
|+..+
T Consensus 287 Ls~gl 291 (550)
T KOG0605|consen 287 LSTGL 291 (550)
T ss_pred ccchh
Confidence 98654
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.9e-24 Score=225.54 Aligned_cols=158 Identities=20% Similarity=0.224 Sum_probs=129.5
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||.||+|+.. +++.||||.+.... ...+.+..|++++..+ +||||+++++++.+ ++..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~-~~~~~lv~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT-KDRLFFVMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-CCeEEEEEeCCC
Confidence 36999999999999975 58899999987532 1235678899999866 79999999998865 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++... ..+++.....++.+++.||.|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 80 ~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~ 148 (321)
T cd05591 80 GGDLMFQIQRS--------RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGIL 148 (321)
T ss_pred CCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999988653 2488999999999999999999998 899999999999999999999999999886522
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
.... ....+||+.|+|
T Consensus 149 ~~~~-~~~~~gt~~y~a 164 (321)
T cd05591 149 NGVT-TTTFCGTPDYIA 164 (321)
T ss_pred CCcc-ccccccCccccC
Confidence 2211 223456666665
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-25 Score=212.62 Aligned_cols=163 Identities=21% Similarity=0.335 Sum_probs=140.3
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---------HHHHHHHHHHHhcC-CCCCccceeEEEEcCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---------KESYMMELDLFSRV-SHARLVPLLGQCLEHE 580 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---------~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~ 580 (693)
+.|.+.+++|+|...+|-++.. ++|+..|||++...... .+...+|+++++++ .||+|+.+..+|- ++
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye-s~ 95 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE-SD 95 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc-Cc
Confidence 4577888999999999998875 56889999998653221 35677899999998 6999999999775 46
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
...++|+|.|+.|.|.|+|... ..++...-.+|+.++..|++|||.. .||||||||+|||+|+++++||
T Consensus 96 sF~FlVFdl~prGELFDyLts~--------VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~i 164 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK--------VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKI 164 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh--------eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEE
Confidence 7899999999999999999753 3478888889999999999999998 9999999999999999999999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+|..+..+.. .+..||||.|.|
T Consensus 165 sDFGFa~~l~~Gek--LrelCGTPgYLA 190 (411)
T KOG0599|consen 165 SDFGFACQLEPGEK--LRELCGTPGYLA 190 (411)
T ss_pred eccceeeccCCchh--HHHhcCCCcccC
Confidence 99999999866555 566899999987
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.4e-24 Score=225.27 Aligned_cols=158 Identities=22% Similarity=0.276 Sum_probs=127.2
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHH-HHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELD-LFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||.||+|+.. +|+.||||.+..... ..+++.+|+. ++..++|||||++++++.+ .+..++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~-~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT-AEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc-CCEEEEEEcCCC
Confidence 36999999999999974 688999999864321 2345666654 5788999999999988765 468899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++... ..+...+...++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 80 ~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 148 (321)
T cd05603 80 GGELFFHLQRE--------RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE 148 (321)
T ss_pred CCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCC
Confidence 99999888643 2477888888999999999999987 999999999999999999999999999886422
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
.... ....+||+.|+|
T Consensus 149 ~~~~-~~~~~gt~~y~a 164 (321)
T cd05603 149 PEET-TSTFCGTPEYLA 164 (321)
T ss_pred CCCc-cccccCCcccCC
Confidence 2221 234567777765
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.8e-24 Score=220.61 Aligned_cols=164 Identities=24% Similarity=0.370 Sum_probs=129.6
Q ss_pred CCCccCccccCCeeeEEEEEe--CCCcEEEEEEeccccc---CHHHHHHHHHHHhcC---CCCCccceeEEEEc----CC
Q 035786 513 NFSETNLIKKGHSGDLFKGTL--AGGTTVVVKKVSLHSF---KKESYMMELDLFSRV---SHARLVPLLGQCLE----HE 580 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~--~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l---~H~niv~l~g~~~~----~~ 580 (693)
+|...+.||+|+||.||+|+. .+|..||||++..... ....+.+|++++..+ +||||++++++|.. .+
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 467778999999999999985 3478899999864322 234577788777665 69999999998852 23
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
...++||||++ |+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~------~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl 151 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPE------PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 151 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEE
Confidence 45789999997 699999875322 3489999999999999999999988 9999999999999999999999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++....... .....|+++|+|
T Consensus 152 ~Dfg~~~~~~~~~~--~~~~~~~~~y~a 177 (290)
T cd07862 152 ADFGLARIYSFQMA--LTSVVVTLWYRA 177 (290)
T ss_pred ccccceEeccCCcc--cccccccccccC
Confidence 99999987643321 223445555554
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.9e-24 Score=229.88 Aligned_cols=145 Identities=17% Similarity=0.250 Sum_probs=127.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|+..+.||+|+||.||+++.. +++.||||.+.... ...+.+.+|++++.+++|+||+++++++.+ ++..++||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-~~~~~lv~ 80 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD-KRNLYLIM 80 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCEEEEEE
Confidence 5777889999999999999874 58999999986432 124568889999999999999999988765 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 81 E~~~gg~L~~~l~~~--------~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~ 149 (360)
T cd05627 81 EFLPGGDMMTLLMKK--------DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCT 149 (360)
T ss_pred eCCCCccHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCc
Confidence 999999999999753 2488899999999999999999988 99999999999999999999999999988
Q ss_pred cc
Q 035786 668 AQ 669 (693)
Q Consensus 668 ~~ 669 (693)
..
T Consensus 150 ~~ 151 (360)
T cd05627 150 GL 151 (360)
T ss_pred cc
Confidence 65
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-24 Score=231.99 Aligned_cols=159 Identities=19% Similarity=0.244 Sum_probs=132.5
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
++|...+.||+|+||.||++.. .+++.||+|+.. .+.+.+|++++++++|||||++++++.. +...++|+||+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTY-NKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEE-CCeeEEEEecC
Confidence 4688889999999999999985 468899999753 3457889999999999999999998865 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
. |+|.+++... ..+++.....|+.|++.||+|||+. +||||||||+|||+++++.+||+|||+|+...
T Consensus 166 ~-~~L~~~l~~~--------~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~ 233 (391)
T PHA03212 166 K-TDLYCYLAAK--------RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPV 233 (391)
T ss_pred C-CCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccc
Confidence 5 7898888643 2488999999999999999999988 99999999999999999999999999998753
Q ss_pred CCCcceeeeeehhhhhhh
Q 035786 671 DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~~~~~~~~~~y~a 688 (693)
+.........+||+.|+|
T Consensus 234 ~~~~~~~~~~~gt~~y~a 251 (391)
T PHA03212 234 DINANKYYGWAGTIATNA 251 (391)
T ss_pred cccccccccccCccCCCC
Confidence 332222334566666654
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=9e-24 Score=225.14 Aligned_cols=148 Identities=21% Similarity=0.304 Sum_probs=129.2
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|+..+.||+|+||.||+++.. +|..||+|.+..... ..++|.+|++++.+++|||||++++++.. ++..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 83 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICME 83 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEEEee
Confidence 45778889999999999999975 688999999865422 24679999999999999999999998875 468899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.+++... ..+++.....++.+++.||+|||+.. +|+||||||+||++++++.+||+|||+++.
T Consensus 84 ~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 153 (331)
T cd06649 84 HMDGGSLDQVLKEA--------KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 153 (331)
T ss_pred cCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccc
Confidence 99999999999753 24889999999999999999999742 599999999999999999999999999987
Q ss_pred cC
Q 035786 669 QG 670 (693)
Q Consensus 669 ~~ 670 (693)
..
T Consensus 154 ~~ 155 (331)
T cd06649 154 LI 155 (331)
T ss_pred cc
Confidence 63
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-24 Score=238.84 Aligned_cols=167 Identities=20% Similarity=0.239 Sum_probs=136.6
Q ss_pred CCccCccccCCeeeEEEEEeC-C-CcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-G-GTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~-g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
|...+.||+|+||.||+|... + ++.||+|++...... ...+.+|++++++++|||||+++++|.. ++..++||||+
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-~~~~~lv~E~~ 147 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKS-DDKLLLIMEYG 147 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE-CCEEEEEEECC
Confidence 666789999999999999853 3 678899977543333 3567889999999999999999999875 46899999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.++++.... ....+++.+...++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 148 ~gg~L~~~l~~~~~----~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 148 SGGDLNKQIKQRLK----EHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred CCCCHHHHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 99999999864321 123588999999999999999999988 99999999999999999999999999999874
Q ss_pred CCCc-ceeeeeehhhhhhh
Q 035786 671 DSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~-~~~~~~~~~~~y~a 688 (693)
+... ......+||+.|+|
T Consensus 221 ~~~~~~~~~~~~gt~~y~a 239 (478)
T PTZ00267 221 DSVSLDVASSFCGTPYYLA 239 (478)
T ss_pred CccccccccccCCCccccC
Confidence 3322 22344567777776
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.91 E-value=8e-24 Score=224.84 Aligned_cols=163 Identities=17% Similarity=0.204 Sum_probs=130.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCC-ccceeEEEEcCCCeeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHAR-LVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~n-iv~l~g~~~~~~~~~~lv 586 (693)
+|...+.||+|+||.||+|+.. +++.||||.+.... ...+.+..|++++..++|++ |+++.+++.+ ++..++|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRLYFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc-CCEEEEE
Confidence 3667789999999999999975 57899999986532 22456888999999997765 6777766654 5689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++... ..+++.+...++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 80 ~E~~~~g~L~~~~~~~--------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~ 148 (324)
T cd05587 80 MEYVNGGDLMYHIQQV--------GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMC 148 (324)
T ss_pred EcCCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcc
Confidence 9999999999998653 2488999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....+||+.|+|
T Consensus 149 ~~~~~~~~-~~~~~~gt~~y~a 169 (324)
T cd05587 149 KENIFGGK-TTRTFCGTPDYIA 169 (324)
T ss_pred eecCCCCC-ceeeecCCccccC
Confidence 76422111 1233456666654
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.9e-24 Score=216.58 Aligned_cols=145 Identities=23% Similarity=0.385 Sum_probs=129.5
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
|...+.||+|+||.||+|+..++..||||.+.......++|.+|++++.+++||||++++++|.+ ....++||||+++|
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~ 84 (256)
T cd05113 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTK-QRPIYIVTEYMSNG 84 (256)
T ss_pred eEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEcc-CCCcEEEEEcCCCC
Confidence 55567899999999999998877789999987655556789999999999999999999998865 45689999999999
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+|.++++... ..++|.++.+++.+++.|++|||+. +|+||||||+||++++++.+||+|||.++..
T Consensus 85 ~l~~~i~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~ 150 (256)
T cd05113 85 CLLNYLREHG-------KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYV 150 (256)
T ss_pred cHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceec
Confidence 9999997532 2489999999999999999999988 9999999999999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-24 Score=219.25 Aligned_cols=143 Identities=29% Similarity=0.486 Sum_probs=123.4
Q ss_pred cCccccCCeeeEEEEEeC-----CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 517 TNLIKKGHSGDLFKGTLA-----GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~-----~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.+.||+|.||.||+|++. .+..|+||.++..... .++|.+|++.+.+++||||++++|+|.. .+..++||||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-~~~~~lv~e~ 82 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-NEPLFLVMEY 82 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES-SSSEEEEEE-
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccc-cccccccccc
Confidence 467999999999999986 2568999999653322 5789999999999999999999999985 4568999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.++|+.... ..++|.++.+|+.|||+||+|||+. +|+|+||+++||++++++.+||+|||+++..
T Consensus 83 ~~~g~L~~~L~~~~~------~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNK------EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPI 153 (259)
T ss_dssp -TTEBHHHHHHHTCT------TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred ccccccccccccccc------ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc
Confidence 999999999987522 3599999999999999999999998 8999999999999999999999999999887
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-24 Score=221.07 Aligned_cols=144 Identities=24% Similarity=0.289 Sum_probs=123.3
Q ss_pred cccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 520 IKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 520 ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
||+|+||+||+++.. +|+.||||++...... .+.+..|++++++++|+||+++.+++.. +...++|||||++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT-KTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC-CCeEEEEEeCCCCCC
Confidence 699999999999864 6899999998653221 3567889999999999999999887764 467899999999999
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
|.++++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 80 L~~~~~~~~~----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 80 LRYHIYNVDE----ENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKD 149 (280)
T ss_pred HHHHHHhccc----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence 9988864321 124589999999999999999999988 999999999999999999999999999987643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.9e-24 Score=221.58 Aligned_cols=147 Identities=24% Similarity=0.289 Sum_probs=127.4
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
|...++||+|+||.||++.. .+++.||||++...... .+.+.+|++++++++|||||++.+++.+ ++..++|||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 80 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-KDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC-CCeEEEEEe
Confidence 56678999999999999986 46899999998653322 3457889999999999999999988765 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++.... ..+++.....++.|++.|+.|||+. +|+||||||+||++++++.++|+|||+++.
T Consensus 81 ~~~~~~L~~~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~ 151 (285)
T cd05605 81 LMNGGDLKFHIYNMGN------PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVE 151 (285)
T ss_pred ccCCCcHHHHHHhcCc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999999998864321 3589999999999999999999988 899999999999999999999999999987
Q ss_pred cC
Q 035786 669 QG 670 (693)
Q Consensus 669 ~~ 670 (693)
..
T Consensus 152 ~~ 153 (285)
T cd05605 152 IP 153 (285)
T ss_pred cC
Confidence 63
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.4e-24 Score=224.68 Aligned_cols=158 Identities=20% Similarity=0.244 Sum_probs=129.5
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||.||+|+.. +++.||||.+.... ...+.+..|++++..+ +||||+++++++.+ .+..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~-~~~~~iv~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT-PDRLFFVMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-CCEEEEEEcCCC
Confidence 36999999999999974 58899999986432 2245678899998877 69999999988765 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.++++.. ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 80 ~g~L~~~i~~~--------~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~ 148 (320)
T cd05590 80 GGDLMFHIQKS--------RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF 148 (320)
T ss_pred CchHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc
Confidence 99999998753 2488999999999999999999988 999999999999999999999999999886422
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
... .....+||+.|+|
T Consensus 149 ~~~-~~~~~~gt~~y~a 164 (320)
T cd05590 149 NGK-TTSTFCGTPDYIA 164 (320)
T ss_pred CCC-cccccccCccccC
Confidence 111 1233456777765
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-23 Score=223.26 Aligned_cols=158 Identities=21% Similarity=0.277 Sum_probs=128.6
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
+.||+|+||.||+|+.. +++.||||.+.... ...+.+..|.+++... +||||+++++++.+ ++..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT-KENLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-CCEEEEEEeCCC
Confidence 36999999999999975 57899999987532 2245577788888764 99999999998875 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++... ..+++.+...++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 80 ~g~L~~~l~~~--------~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~ 148 (316)
T cd05619 80 GGDLMFHIQSC--------HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENML 148 (316)
T ss_pred CCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCC
Confidence 99999998653 2488999999999999999999988 999999999999999999999999999886422
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
.... .....||+.|+|
T Consensus 149 ~~~~-~~~~~gt~~y~a 164 (316)
T cd05619 149 GDAK-TCTFCGTPDYIA 164 (316)
T ss_pred CCCc-eeeecCCccccC
Confidence 1111 223456666665
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.9e-24 Score=217.78 Aligned_cols=148 Identities=22% Similarity=0.425 Sum_probs=131.1
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
+|...+.||+|+||.||+|... .++.||+|.+.......++|.+|++++.+++|+||++++++|.+ +...++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcC-CCCcEEEEEeCC
Confidence 3667788999999999999975 58899999987655456789999999999999999999999875 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|+|.+++..... ..++|.++..++.|+++||+|||.. +++||||||+||++++++.+||+|||+++...
T Consensus 86 ~~~L~~~~~~~~~------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~ 155 (263)
T cd05052 86 YGNLLDYLRECNR------QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 155 (263)
T ss_pred CCcHHHHHHhCCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccc
Confidence 9999999975321 3589999999999999999999988 89999999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.3e-24 Score=224.46 Aligned_cols=158 Identities=25% Similarity=0.259 Sum_probs=128.2
Q ss_pred CccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHH-HHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELD-LFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||.||+|+. .+|+.||||.+.... ...+++..|.. +++.++||||+++++++.. ++..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~-~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-TEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-CCEEEEEEcCCC
Confidence 3699999999999986 468999999986432 12345666665 4678999999999988765 468899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++... ..+++.+...++.|+++||+|||.. +|+||||||+|||+++++.+||+|||+++....
T Consensus 80 ~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~ 148 (325)
T cd05604 80 GGELFFHLQRE--------RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA 148 (325)
T ss_pred CCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCC
Confidence 99999888643 3488999999999999999999988 999999999999999999999999999886422
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
... ..+..+||+.|+|
T Consensus 149 ~~~-~~~~~~gt~~y~a 164 (325)
T cd05604 149 QSD-TTTTFCGTPEYLA 164 (325)
T ss_pred CCC-CcccccCChhhCC
Confidence 221 1334567777765
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.4e-24 Score=224.22 Aligned_cols=158 Identities=24% Similarity=0.282 Sum_probs=128.1
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHH-HHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELD-LFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||+||+|+.. +|+.||||++..... ..+++.+|.. ++..++|||||++++++.+ ++..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-ADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-CCEEEEEEcCCC
Confidence 36999999999999974 689999999864321 1344556655 5678999999999988765 468899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 80 ~g~L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~ 148 (323)
T cd05575 80 GGELFFHLQRE--------RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE 148 (323)
T ss_pred CCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccccc
Confidence 99999998753 2488899999999999999999988 999999999999999999999999999886422
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
... .....+||+.|+|
T Consensus 149 ~~~-~~~~~~gt~~y~a 164 (323)
T cd05575 149 HSK-TTSTFCGTPEYLA 164 (323)
T ss_pred CCC-ccccccCChhhcC
Confidence 221 1334567777765
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.9e-24 Score=223.65 Aligned_cols=158 Identities=18% Similarity=0.261 Sum_probs=127.7
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||.||+|+.. +++.||||.+.... ...+.+..|.+++... +||||+++++++.. +...++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~-~~~~~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT-KEHLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc-CCEEEEEEcCCC
Confidence 36999999999999975 58899999986532 1234566777777654 89999999988765 468899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++... ..+++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 80 gg~L~~~~~~~--------~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~ 148 (316)
T cd05592 80 GGDLMFHIQSS--------GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMN 148 (316)
T ss_pred CCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCC
Confidence 99999998653 2488888999999999999999998 999999999999999999999999999986522
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
... .....+||+.|+|
T Consensus 149 ~~~-~~~~~~gt~~y~a 164 (316)
T cd05592 149 GEG-KASTFCGTPDYIA 164 (316)
T ss_pred CCC-ccccccCCccccC
Confidence 221 1233557777765
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.3e-24 Score=224.73 Aligned_cols=161 Identities=22% Similarity=0.294 Sum_probs=129.4
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHH---hcCCCCCccceeEEEEcCCCeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLF---SRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l---~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
|...+.||+|+||.||+|... +|+.||||.++... ...+.+.+|++++ ++++||||+++++++.+ ++..++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-EDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-CCEEEE
Confidence 345678999999999999864 68999999996432 1234566676554 67789999999998865 468999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|..+++. ..+++.+...++.+++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 80 v~E~~~~~~L~~~~~~---------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~ 147 (324)
T cd05589 80 VMEYAAGGDLMMHIHT---------DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGL 147 (324)
T ss_pred EEcCCCCCcHHHHhhc---------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccC
Confidence 9999999999988863 2489999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++........ ....+|++.|+|
T Consensus 148 ~~~~~~~~~~-~~~~~g~~~y~a 169 (324)
T cd05589 148 CKEGMGFGDR-TSTFCGTPEFLA 169 (324)
T ss_pred CccCCCCCCc-ccccccCccccC
Confidence 8764222111 223556666665
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.8e-24 Score=219.16 Aligned_cols=152 Identities=20% Similarity=0.369 Sum_probs=132.0
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCC-----Ce
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHE-----TE 582 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~-----~~ 582 (693)
+++.|+..+.||+|+||.||+|... +++.||+|++.......+++.+|++++.++ +|+||+++.++|...+ ..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 83 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence 4556777888999999999999864 588999999976655567899999999999 7999999999986432 35
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||+++|+|.+++..... ..++|.....++.|++.|++|||+. +|+||||||+||++++++.+||+|
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 84 LWLVMEFCGAGSVTDLIKNTKG------NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred EEEEEEcCCCCcHHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 7899999999999999975321 3589999999999999999999988 899999999999999999999999
Q ss_pred cccccccC
Q 035786 663 LSELHAQG 670 (693)
Q Consensus 663 fgla~~~~ 670 (693)
||+++...
T Consensus 155 fg~~~~~~ 162 (272)
T cd06637 155 FGVSAQLD 162 (272)
T ss_pred CCCceecc
Confidence 99998753
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.5e-24 Score=229.11 Aligned_cols=164 Identities=19% Similarity=0.243 Sum_probs=132.5
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCC----CeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHE----TEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~~ 584 (693)
+|+..+.||+|+||.||+|.. .+|+.||||++..... ..+++.+|++++..++|+||+++++++...+ ...+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 367788999999999999996 5789999999864322 2457889999999999999999999886432 1679
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+|+||++ ++|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||
T Consensus 81 lv~e~~~-~~l~~~~~~~--------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg 148 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP--------QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFG 148 (372)
T ss_pred EEeeccc-cCHHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEecccc
Confidence 9999997 5888877542 3489999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++..........+...++++|+|
T Consensus 149 ~a~~~~~~~~~~~~~~~~~~~y~a 172 (372)
T cd07853 149 LARVEEPDESKHMTQEVVTQYYRA 172 (372)
T ss_pred ceeecccCccccCCCCCcCCCcCC
Confidence 998764322222333345555544
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.3e-26 Score=239.62 Aligned_cols=274 Identities=28% Similarity=0.319 Sum_probs=154.0
Q ss_pred ccccCCCCCEEEccCCCCC-CcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLP-GSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELK 166 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~-g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 166 (693)
.+..|+.|+++.+..|++. ..||+++.. |..|..||||+|++. ..|..+.+-+++-+|+||+|+|..+.-..|.+|+
T Consensus 73 ELs~Lp~LRsv~~R~N~LKnsGiP~diF~-l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLt 150 (1255)
T KOG0444|consen 73 ELSDLPRLRSVIVRDNNLKNSGIPTDIFR-LKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLT 150 (1255)
T ss_pred hhccchhhHHHhhhccccccCCCCchhcc-cccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhH
Confidence 3455666666666666653 346666653 777777777777776 5566676667777777777777633333456677
Q ss_pred CCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCccc-ccCCccccCCCCCCEEEc
Q 035786 167 KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT-GFIPSEVGNLDKLIELDL 245 (693)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~L 245 (693)
.|-+||||+|++. .+|+.+..+.+|++|.|++|.+.-.--..+-.+++|++|.+++.+-+ ..+|.++..+.+|..+|+
T Consensus 151 DLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDl 229 (1255)
T KOG0444|consen 151 DLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDL 229 (1255)
T ss_pred hHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccc
Confidence 7777777777765 55666677777777777777654221222233445555555554322 235555666666666666
Q ss_pred cCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcc
Q 035786 246 SKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG 325 (693)
Q Consensus 246 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g 325 (693)
|.|++. .+|+.+-++++|+.|+||+|+++. +.... ....+|++|+||.|+++ .+|..+..+++|+.|.+.+|+++-
T Consensus 230 S~N~Lp-~vPecly~l~~LrrLNLS~N~ite-L~~~~-~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~F 305 (1255)
T KOG0444|consen 230 SENNLP-IVPECLYKLRNLRRLNLSGNKITE-LNMTE-GEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTF 305 (1255)
T ss_pred cccCCC-cchHHHhhhhhhheeccCcCceee-eeccH-HHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccc
Confidence 666665 456666666666666666666552 22111 22345666666666665 455566666666666666665542
Q ss_pred -cCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcc
Q 035786 326 -SWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYF 370 (693)
Q Consensus 326 -~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l 370 (693)
-|| ..++.+..|+++..++|.+.- +|. ..+..|+.|.|+.|.+
T Consensus 306 eGiP-SGIGKL~~Levf~aanN~LEl-VPEglcRC~kL~kL~L~~NrL 351 (1255)
T KOG0444|consen 306 EGIP-SGIGKLIQLEVFHAANNKLEL-VPEGLCRCVKLQKLKLDHNRL 351 (1255)
T ss_pred cCCc-cchhhhhhhHHHHhhcccccc-CchhhhhhHHHHHhcccccce
Confidence 233 234444455555555555431 222 2233444444444443
|
|
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-23 Score=216.89 Aligned_cols=147 Identities=22% Similarity=0.382 Sum_probs=129.4
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
.|...+.||+|+||.||+|+..+...||||++.......++|.+|++++.+++|+||+++++++. +...++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~--~~~~~lv~e~~~~ 84 (262)
T cd05071 7 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--EEPIYIVTEYMSK 84 (262)
T ss_pred HeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC--CCCcEEEEEcCCC
Confidence 36667889999999999999877778999999765555678999999999999999999998764 3467999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|+|.++++.... ..++|.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||.++...
T Consensus 85 ~~L~~~~~~~~~------~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~ 153 (262)
T cd05071 85 GSLLDFLKGEMG------KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 153 (262)
T ss_pred CcHHHHHhhccc------cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecc
Confidence 999999975321 3589999999999999999999987 89999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=217.36 Aligned_cols=144 Identities=24% Similarity=0.385 Sum_probs=121.7
Q ss_pred ccccCCeeeEEEEEeCC---CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 519 LIKKGHSGDLFKGTLAG---GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~---g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
.||+|+||+||+|+..+ ...||+|.+...... .+.|.+|+++++.++|+||++++++|.+ ....++||||+++|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~-~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE-SIPYLLVLEFCPLG 80 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECC-CCceEEEEEeCCCC
Confidence 58999999999998543 357899987643322 4578999999999999999999999875 46789999999999
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+|.++++..... .....++.....++.|++.|++|||+. +|+||||||+||++++++++||+|||+++..
T Consensus 81 ~L~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 150 (269)
T cd05042 81 DLKNYLRSNRGM---VAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQ 150 (269)
T ss_pred cHHHHHHhcccc---ccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEecccccccc
Confidence 999999764321 113357888899999999999999988 9999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=216.80 Aligned_cols=144 Identities=28% Similarity=0.417 Sum_probs=123.0
Q ss_pred ccccCCeeeEEEEEeCC---CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 519 LIKKGHSGDLFKGTLAG---GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~---g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
.||+|+||.||+|+..+ +..+|+|++...... ...|.+|++++++++||||++++|+|.+ ....++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~g 80 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE-VTPYLLVMEFCPLG 80 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CCCcEEEEECCCCC
Confidence 58999999999998643 457999998654322 3578999999999999999999998875 45789999999999
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+|.++++..... ....++|..+..++.|++.|++|||+. +++||||||+||++++++++|++|||+++..
T Consensus 81 ~L~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~ 150 (269)
T cd05087 81 DLKGYLRSCRKA---ELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNK 150 (269)
T ss_pred cHHHHHHHhhhc---ccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccc
Confidence 999999754321 123578888999999999999999988 8999999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=223.98 Aligned_cols=147 Identities=22% Similarity=0.349 Sum_probs=128.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|+..+.||+|+||.||+|+.. +|+.||+|.+...... .++|.+|++++.+++|+|||+++++|.+ ++..++|||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 83 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICME 83 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-CCEEEEEEe
Confidence 46778889999999999999975 6889999988654222 4579999999999999999999999986 468999999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++.. ..+++.....++.+++.||+|||+.. +|+||||||+||++++++.+||+|||+++.
T Consensus 84 ~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~ 153 (333)
T cd06650 84 HMDGGSLDQVLKKA--------GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 153 (333)
T ss_pred cCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchh
Confidence 99999999999753 24788999999999999999999642 699999999999999999999999999986
Q ss_pred c
Q 035786 669 Q 669 (693)
Q Consensus 669 ~ 669 (693)
.
T Consensus 154 ~ 154 (333)
T cd06650 154 L 154 (333)
T ss_pred h
Confidence 5
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.1e-24 Score=243.29 Aligned_cols=154 Identities=21% Similarity=0.267 Sum_probs=130.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...++||+|+||.||+|+.. +|+.||||++...... .++|.+|++++++++|||||+++++|.+ ++..++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d-~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD-GDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-CCEEEEE
Confidence 35777889999999999999864 5899999998653221 4579999999999999999999998875 4678999
Q ss_pred EccCCCCChhhhhhccCC---CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 587 YKYMVCGDLASSLHRVTD---LEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~---~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
|||+++|+|.++++.... ........+++.+.++++.+|++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEec
Confidence 999999999999974321 1111224578899999999999999999988 9999999999999999999999999
Q ss_pred cccccc
Q 035786 664 SELHAQ 669 (693)
Q Consensus 664 gla~~~ 669 (693)
|+++..
T Consensus 158 GLAk~i 163 (932)
T PRK13184 158 GAAIFK 163 (932)
T ss_pred Ccceec
Confidence 999876
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-24 Score=231.42 Aligned_cols=160 Identities=18% Similarity=0.341 Sum_probs=135.5
Q ss_pred cCccccCCeeeEEEEEeC-CCcEEEEEEeccc---cc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCC-eeEEEEcc
Q 035786 517 TNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLH---SF--KKESYMMELDLFSRVSHARLVPLLGQCLEHET-EKLLVYKY 589 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~---~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-~~~lv~ey 589 (693)
..+||+|+|=+||||... +|..||.-.++.. .. ..+.|..|+++|+.++|+|||+++.++.+..+ ..-+|.|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 457999999999999864 5888887655422 12 23789999999999999999999988775433 24589999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEECCcccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLGSLSELHA 668 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~Dfgla~~ 668 (693)
|..|+|+.|+.+.++ ++......+|.||.+||.|||.+ .|||||||||..||+|..+ +++||||+|||.+
T Consensus 125 ~TSGtLr~Y~kk~~~--------vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR--------VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATL 195 (632)
T ss_pred ccCCcHHHHHHHhcc--------CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHH
Confidence 999999999987653 77888899999999999999986 8999999999999999865 8999999999999
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
...++. +.++|||++||
T Consensus 196 ~r~s~a---ksvIGTPEFMA 212 (632)
T KOG0584|consen 196 LRKSHA---KSVIGTPEFMA 212 (632)
T ss_pred hhcccc---ceeccCccccC
Confidence 977665 45899999998
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=222.32 Aligned_cols=158 Identities=18% Similarity=0.250 Sum_probs=128.2
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||.||+|+.. +|+.||||.++... ...+.+..|++++... +||||+++++++.+ ++..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT-KEHLFFVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-CCEEEEEECCCC
Confidence 46999999999999975 58899999987532 2234577788888754 89999999998865 468899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++... ..+++.+...++.++++||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 80 ~g~L~~~i~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 148 (316)
T cd05620 80 GGDLMFHIQDK--------GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF 148 (316)
T ss_pred CCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeeccc
Confidence 99999998653 2488999999999999999999988 999999999999999999999999999885421
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
... ..+..+||+.|+|
T Consensus 149 ~~~-~~~~~~gt~~y~a 164 (316)
T cd05620 149 GDN-RASTFCGTPDYIA 164 (316)
T ss_pred CCC-ceeccCCCcCccC
Confidence 111 1233556666654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=215.64 Aligned_cols=146 Identities=21% Similarity=0.348 Sum_probs=130.1
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
|...+.||+|+||.||+|...++..+|||.+.......++|.+|++++.+++|+||+++++++.+ .+..++||||+++|
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~ 84 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTK-QRPIFIVTEYMANG 84 (256)
T ss_pred cchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcC-CCceEEEEecCCCC
Confidence 56677899999999999998877889999987655556679999999999999999999998865 46789999999999
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|.++++... ..++|.++..++.+++.|++|||.. +|+||||||+||++++++.+|++|||+++...
T Consensus 85 ~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~ 151 (256)
T cd05059 85 CLLNYLRERK-------GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVL 151 (256)
T ss_pred CHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecc
Confidence 9999997532 2489999999999999999999988 89999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.4e-24 Score=224.20 Aligned_cols=144 Identities=17% Similarity=0.238 Sum_probs=122.6
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCC-CCccceeEEEEcCCCeeEEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSH-ARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~~lv~ 587 (693)
|...++||+|+||.||+|+.. +|+.||||.+.... ...+.+..|++++..+.| ++|+++.+++.+ ++..++||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv~ 80 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT-VDRLYFVM 80 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec-CCEEEEEE
Confidence 667789999999999999864 68999999987532 123568889999998865 567777776554 56789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++... ..+++.+...|+.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 81 Ey~~~g~L~~~i~~~--------~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~ 149 (323)
T cd05615 81 EYVNGGDLMYHIQQV--------GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred cCCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEecccccc
Confidence 999999999998653 2489999999999999999999988 99999999999999999999999999988
Q ss_pred cc
Q 035786 668 AQ 669 (693)
Q Consensus 668 ~~ 669 (693)
..
T Consensus 150 ~~ 151 (323)
T cd05615 150 EH 151 (323)
T ss_pred cc
Confidence 64
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=217.74 Aligned_cols=155 Identities=26% Similarity=0.443 Sum_probs=132.5
Q ss_pred CCCCccCccccCCeeeEEEEEeCC-----CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG-----GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~-----g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
++|...++||+|+||.||+|...+ +..||+|++..... ..+.+.+|++++.+++|+||++++++|.+.+...+
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 85 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF 85 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence 457778899999999999999755 68899999864332 24678999999999999999999999986556789
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+++||+++|+|.+++.............++|.++..++.+++.||+|||+. +++||||||+||++++++.+||+|||
T Consensus 86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~g 162 (280)
T cd05043 86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDNA 162 (280)
T ss_pred EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCCC
Confidence 999999999999999764321111224699999999999999999999987 99999999999999999999999999
Q ss_pred ccccc
Q 035786 665 ELHAQ 669 (693)
Q Consensus 665 la~~~ 669 (693)
+++.+
T Consensus 163 ~~~~~ 167 (280)
T cd05043 163 LSRDL 167 (280)
T ss_pred Ccccc
Confidence 99865
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.5e-26 Score=240.15 Aligned_cols=311 Identities=28% Similarity=0.387 Sum_probs=206.9
Q ss_pred EeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCcc
Q 035786 64 VIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSR 143 (693)
Q Consensus 64 v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~ 143 (693)
|.++|+++.... .+.+| ..+..++.++.|.+....+. .+|++++. |.+|++|.+++|++. .+-+.++.|+.
T Consensus 9 VrGvDfsgNDFs-g~~FP-----~~v~qMt~~~WLkLnrt~L~-~vPeEL~~-lqkLEHLs~~HN~L~-~vhGELs~Lp~ 79 (1255)
T KOG0444|consen 9 VRGVDFSGNDFS-GDRFP-----HDVEQMTQMTWLKLNRTKLE-QVPEELSR-LQKLEHLSMAHNQLI-SVHGELSDLPR 79 (1255)
T ss_pred eecccccCCcCC-CCcCc-----hhHHHhhheeEEEechhhhh-hChHHHHH-HhhhhhhhhhhhhhH-hhhhhhccchh
Confidence 566677664321 12333 25566677777777665554 67887765 888888888888776 45566777778
Q ss_pred CCEEecccCcCC-ccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcc-cccCCCCCCEEEc
Q 035786 144 LNVLYLSGNSLA-GNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPS-GLYSLSSIQFLNL 221 (693)
Q Consensus 144 L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L 221 (693)
|+.+++..|++. ..+|..+..|..|..||||+|++. +.|..+..-+++..|+||+|++. .||. -+.+++.|-+|||
T Consensus 80 LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDL 157 (1255)
T KOG0444|consen 80 LRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDL 157 (1255)
T ss_pred hHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhcc
Confidence 888888877774 346777777888888888888877 67777777778888888888876 4444 3457777888888
Q ss_pred cCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc-ccCCCcccCCCCCCCEEEccCCcCC
Q 035786 222 SDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE-GQLSEGLFPTLDQLQVVDLSGNKLD 300 (693)
Q Consensus 222 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-g~i~~~~~~~l~~L~~L~Ls~N~l~ 300 (693)
|+|++. .+|+.+..+..|++|+|++|.+.-.--..+..+++|++|.+++.+-+ ..+|..+ ..+.+|..+|+|.|.+.
T Consensus 158 S~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsl-d~l~NL~dvDlS~N~Lp 235 (1255)
T KOG0444|consen 158 SNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSL-DDLHNLRDVDLSENNLP 235 (1255)
T ss_pred ccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCch-hhhhhhhhccccccCCC
Confidence 888876 56666777778888888887765333333445666777777765433 2455544 56777778888888776
Q ss_pred CcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCccee-ecCCC
Q 035786 301 GALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQG-TVADD 377 (693)
Q Consensus 301 g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g-~ip~~ 377 (693)
.+|..+.++++|+.|+||+|+|+. +. ........++.||||.|+++- +|. ..+++|+.|.+.+|+++- .||..
T Consensus 236 -~vPecly~l~~LrrLNLS~N~ite-L~-~~~~~W~~lEtLNlSrNQLt~-LP~avcKL~kL~kLy~n~NkL~FeGiPSG 311 (1255)
T KOG0444|consen 236 -IVPECLYKLRNLRRLNLSGNKITE-LN-MTEGEWENLETLNLSRNQLTV-LPDAVCKLTKLTKLYANNNKLTFEGIPSG 311 (1255)
T ss_pred -cchHHHhhhhhhheeccCcCceee-ee-ccHHHHhhhhhhccccchhcc-chHHHhhhHHHHHHHhccCcccccCCccc
Confidence 567777788888888888887762 11 112233456777888888764 343 456677777777777652 36666
Q ss_pred cCc-----ccccCCCcCCC
Q 035786 378 RGR-----NVSLGRNCLQS 391 (693)
Q Consensus 378 ~~~-----~~~l~~n~l~g 391 (693)
++. .+..++|.|.-
T Consensus 312 IGKL~~Levf~aanN~LEl 330 (1255)
T KOG0444|consen 312 IGKLIQLEVFHAANNKLEL 330 (1255)
T ss_pred hhhhhhhHHHHhhcccccc
Confidence 653 33445555543
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=217.69 Aligned_cols=156 Identities=21% Similarity=0.358 Sum_probs=130.1
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC------CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCC
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHET 581 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~ 581 (693)
++++|+..+.||+|+||.||+|... ++..||||++..... ...+|.+|++++++++||||++++++|.+ +.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-~~ 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-GQ 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CC
Confidence 3456888899999999999999753 256899999864322 24579999999999999999999998865 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCC--CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceE
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLE--DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~--~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~k 659 (693)
..++||||+++|+|.++++...... ......++|.+++.++.+++.||+|||.. +++||||||+||++++++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEE
Confidence 7899999999999999997532211 11123578999999999999999999987 899999999999999999999
Q ss_pred ECCccccccc
Q 035786 660 LGSLSELHAQ 669 (693)
Q Consensus 660 i~Dfgla~~~ 669 (693)
++|||+++..
T Consensus 160 l~dfg~~~~~ 169 (277)
T cd05062 160 IGDFGMTRDI 169 (277)
T ss_pred ECCCCCcccc
Confidence 9999998865
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-25 Score=217.68 Aligned_cols=162 Identities=18% Similarity=0.328 Sum_probs=141.7
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
|+....+|+|+||.||||.. ..|+.||||++...+ .-++...||.+|...+.|.+|+++|-|+. ....++|||||--
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-DLQEIIKEISIMQQC~S~yVVKYYGSYFK-~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-DLQEIIKEISIMQQCKSKYVVKYYGSYFK-HSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-hHHHHHHHHHHHHHcCCchhhhhhhhhcc-CCceEeehhhcCC
Confidence 44456799999999999986 569999999997654 34568899999999999999999998875 4689999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDS 672 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~ 672 (693)
|+..+.++.++ ++|.......|..+..+||+|||.- +=||||||+.||||+.++.+|++|||.|..+.++
T Consensus 113 GSiSDI~R~R~-------K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT 182 (502)
T KOG0574|consen 113 GSISDIMRARR-------KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT 182 (502)
T ss_pred CcHHHHHHHhc-------CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhh
Confidence 99999998543 5699999999999999999999987 7899999999999999999999999999998777
Q ss_pred Ccceeeeeehhhhhhh
Q 035786 673 HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 673 ~~~~~~~~~~~~~y~a 688 (693)
... ...+.|||.|||
T Consensus 183 MAK-RNTVIGTPFWMA 197 (502)
T KOG0574|consen 183 MAK-RNTVIGTPFWMA 197 (502)
T ss_pred HHh-hCccccCccccc
Confidence 665 344789999987
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.8e-24 Score=226.74 Aligned_cols=154 Identities=21% Similarity=0.314 Sum_probs=128.5
Q ss_pred CCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 513 NFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
+|...+.||+|+||.||+|.. .+++.||||++...... .+.+.+|++++.++ +|+|||+++++|...+...
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 87 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCce
Confidence 477788999999999999973 34789999999754322 35688999999999 6899999999987655678
Q ss_pred EEEEccCCCCChhhhhhccCCCC---------------------------------------------------------
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLE--------------------------------------------------------- 606 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~--------------------------------------------------------- 606 (693)
++||||+++|+|.++++......
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 89999999999999997532100
Q ss_pred --CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 607 --DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 607 --~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
......++|.++.+++.++++||+|||+. +|+||||||+||++++++++||+|||+++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~ 229 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDI 229 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEeccccccc
Confidence 00013478999999999999999999988 9999999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=218.26 Aligned_cols=148 Identities=23% Similarity=0.381 Sum_probs=128.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-----CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-----GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-----~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~l 585 (693)
+|...+.||+|+||.||+|.+. ++..||||++...... .+.|.+|++++.+++|||||++.++|... ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 4666788999999999999853 4789999998654332 46799999999999999999999988643 245789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|+||+++|+|.++++... ..++|.++..++.+++.||+|||.. +|+||||||+||++++++.+||+|||+
T Consensus 85 v~e~~~~~~L~~~l~~~~-------~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~ 154 (284)
T cd05081 85 VMEYLPYGSLRDYLQKHR-------ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGL 154 (284)
T ss_pred EEEecCCCCHHHHHHhcC-------cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcc
Confidence 999999999999997532 2489999999999999999999988 999999999999999999999999999
Q ss_pred ccccC
Q 035786 666 LHAQG 670 (693)
Q Consensus 666 a~~~~ 670 (693)
++...
T Consensus 155 ~~~~~ 159 (284)
T cd05081 155 TKVLP 159 (284)
T ss_pred ccccc
Confidence 99763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=223.18 Aligned_cols=158 Identities=20% Similarity=0.223 Sum_probs=129.7
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||.||+|+.. +++.||||.+..... ..+.+.+|+.++.++ +||||+++++++.+ .+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT-TSRLFLVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-CCEEEEEEeCCC
Confidence 46999999999999964 578999999975322 134688899999888 69999999987764 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 80 ~~~L~~~~~~~--------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~ 148 (327)
T cd05617 80 GGDLMFHMQRQ--------RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG 148 (327)
T ss_pred CCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccC
Confidence 99999888643 2489999999999999999999998 999999999999999999999999999886422
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
.... ....+||+.|+|
T Consensus 149 ~~~~-~~~~~gt~~y~a 164 (327)
T cd05617 149 PGDT-TSTFCGTPNYIA 164 (327)
T ss_pred CCCc-eecccCCcccCC
Confidence 1111 233556777765
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.1e-24 Score=225.56 Aligned_cols=154 Identities=20% Similarity=0.323 Sum_probs=128.4
Q ss_pred CCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
.|...++||+|+||.||+|... .++.||+|++...... .+.+.+|++++.++ +|+||++++++|...+...
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 4667789999999999999742 2478999998643322 35688899999999 8999999999998666678
Q ss_pred EEEEccCCCCChhhhhhccCCCC-----------------------------------------------------CCCC
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLE-----------------------------------------------------DDSL 610 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~-----------------------------------------------------~~~~ 610 (693)
++|+||+++|+|.++++...... ....
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 89999999999999986432100 0001
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 611 QSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 611 ~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
..++|..+.+++.+|+.||+|||+. +|+||||||+||++++++.+||+|||+++.+
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~ 223 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDI 223 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhc
Confidence 3689999999999999999999988 9999999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=222.14 Aligned_cols=163 Identities=17% Similarity=0.205 Sum_probs=131.7
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv 586 (693)
+|...+.||+|+||.||+|+.. +++.||||.+..... ..+.+..|.+++..+ +|++|+++.+++.+ ++..++|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT-MDRLYFV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec-CCEEEEE
Confidence 3667789999999999999865 578999999875322 234577788888877 57888888887764 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++... ..+++.++..++.|++.||+|||.. +|+||||||+|||+++++.+||+|||++
T Consensus 80 ~E~~~~g~L~~~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~ 148 (323)
T cd05616 80 MEYVNGGDLMYQIQQV--------GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMC 148 (323)
T ss_pred EcCCCCCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCc
Confidence 9999999999998653 2488999999999999999999988 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ ....+||+.|+|
T Consensus 149 ~~~~~~~~~-~~~~~gt~~y~a 169 (323)
T cd05616 149 KENMWDGVT-TKTFCGTPDYIA 169 (323)
T ss_pred eecCCCCCc-cccCCCChhhcC
Confidence 865321111 233557777765
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=214.63 Aligned_cols=147 Identities=23% Similarity=0.411 Sum_probs=130.4
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|...++..||+|.+.......++|.+|++++.+++|+|++++++++. +...++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~--~~~~~lv~e~~~~ 84 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS--EEPIYIVTEYMSK 84 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC--CCCcEEEEEecCC
Confidence 35566789999999999999888889999999765556678999999999999999999999874 3568999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|+|.++++.... ..++|.++.+++.+++.|++|||+. +|+||||||+||++++++.+|++|||+++...
T Consensus 85 ~~L~~~~~~~~~------~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05070 85 GSLLDFLKDGEG------RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIE 153 (260)
T ss_pred CcHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeecc
Confidence 999999975321 3589999999999999999999988 89999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-23 Score=214.80 Aligned_cols=151 Identities=23% Similarity=0.374 Sum_probs=124.9
Q ss_pred CccCccccCCeeeEEEEEeCC-Cc--EEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----Cee
Q 035786 515 SETNLIKKGHSGDLFKGTLAG-GT--TVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHE-----TEK 583 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~~~-g~--~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~ 583 (693)
...++||+|+||.||+|+..+ +. .||||.++.... ..++|.+|++++.+++|+||++++++|.... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 345789999999999999754 33 699998865422 2467899999999999999999999986421 246
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++|+|||++|+|.+++..... ......++|.+...++.|++.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRL--GDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcc--cCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 899999999999998853221 11234589999999999999999999987 9999999999999999999999999
Q ss_pred ccccccC
Q 035786 664 SELHAQG 670 (693)
Q Consensus 664 gla~~~~ 670 (693)
|+++...
T Consensus 157 g~~~~~~ 163 (272)
T cd05075 157 GLSKKIY 163 (272)
T ss_pred CcccccC
Confidence 9999763
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=228.61 Aligned_cols=153 Identities=24% Similarity=0.365 Sum_probs=128.1
Q ss_pred CCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCC-CCCccceeEEEEcCCCee
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVS-HARLVPLLGQCLEHETEK 583 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~ 583 (693)
++...+.||+|+||.||+|++. .++.||||++...... .+.|.+|++++.++. |||||+++|+|.. +...
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~-~~~~ 116 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK-GGPI 116 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc-CCCc
Confidence 3566789999999999999863 2468999999754322 357899999999997 9999999999875 4578
Q ss_pred EEEEccCCCCChhhhhhccCCCC---------------------------------------------------------
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLE--------------------------------------------------------- 606 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~--------------------------------------------------------- 606 (693)
++|+||+++|+|.+++++.....
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 99999999999999998542100
Q ss_pred ---------------------------------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC
Q 035786 607 ---------------------------------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD 653 (693)
Q Consensus 607 ---------------------------------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld 653 (693)
......++|.+..+|+.+++.||+|||+. +|+||||||+|||++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~ 273 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLIC 273 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEEe
Confidence 00123588999999999999999999987 999999999999999
Q ss_pred CCCceEECCccccccc
Q 035786 654 DKFEVRLGSLSELHAQ 669 (693)
Q Consensus 654 ~~~~~ki~Dfgla~~~ 669 (693)
++..+|++|||+++.+
T Consensus 274 ~~~~~kL~DfGla~~~ 289 (401)
T cd05107 274 EGKLVKICDFGLARDI 289 (401)
T ss_pred CCCEEEEEecCcceec
Confidence 9999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-23 Score=213.59 Aligned_cols=146 Identities=23% Similarity=0.405 Sum_probs=128.6
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
|.....||+|+||.||+|...++..||+|++.......+.|.+|++++++++|+|++++++++. ++..++||||+++|
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~~~ 85 (260)
T cd05069 8 LRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS--EEPIYIVTEFMGKG 85 (260)
T ss_pred eeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc--CCCcEEEEEcCCCC
Confidence 5556789999999999999887778999998765555678999999999999999999998774 35688999999999
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|.++++.... ..++|..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 86 ~L~~~~~~~~~------~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05069 86 SLLDFLKEGDG------KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIE 153 (260)
T ss_pred CHHHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEcc
Confidence 99999975321 3489999999999999999999987 89999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-23 Score=214.25 Aligned_cols=148 Identities=20% Similarity=0.337 Sum_probs=129.5
Q ss_pred CCCCccCccccCCeeeEEEEEeCC----CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++|+..+.||+|+||+||+|++.. ...||||.+...... .++|.+|++++.+++||||+++++++.+ ++..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~i 82 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK-SRPVMI 82 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec-CCceEE
Confidence 357788899999999999999742 458999998654332 4679999999999999999999998865 467899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..++|.++.+++.+++.|++|||+. +|+||||||+||++++++.+|++|||+
T Consensus 83 v~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~ 152 (266)
T cd05033 83 ITEYMENGSLDKFLREND-------GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGL 152 (266)
T ss_pred EEEcCCCCCHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccch
Confidence 999999999999997532 2589999999999999999999987 899999999999999999999999999
Q ss_pred ccccC
Q 035786 666 LHAQG 670 (693)
Q Consensus 666 a~~~~ 670 (693)
++...
T Consensus 153 ~~~~~ 157 (266)
T cd05033 153 SRRLE 157 (266)
T ss_pred hhccc
Confidence 99874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=216.80 Aligned_cols=145 Identities=25% Similarity=0.348 Sum_probs=124.2
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCc----EEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGT----TVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~----~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||.||+|++. +|+ .||+|++...... .+++..|+.++++++|||||+++|+|.. ...++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~--~~~~~ 85 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG--ASLQL 85 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC--CccEE
Confidence 4667789999999999999973 444 4788887543222 3578889999999999999999998853 45789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|+||+++|+|.++++... ..++|.....++.|++.||+|||+. +++||||||+||++++++.+|++|||+
T Consensus 86 i~e~~~~gsL~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~ 155 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR-------DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGV 155 (279)
T ss_pred EEEeCCCCcHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCcc
Confidence 999999999999997532 3589999999999999999999987 899999999999999999999999999
Q ss_pred cccc
Q 035786 666 LHAQ 669 (693)
Q Consensus 666 a~~~ 669 (693)
++..
T Consensus 156 ~~~~ 159 (279)
T cd05111 156 ADLL 159 (279)
T ss_pred ceec
Confidence 9876
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-24 Score=225.44 Aligned_cols=160 Identities=21% Similarity=0.376 Sum_probs=136.2
Q ss_pred ccCHHHHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 035786 501 SFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHE 580 (693)
Q Consensus 501 ~~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~ 580 (693)
.++|+++. +.+-+|.|+-|.||+|++. ++.||||++.... ..+|+-|++++|+||+.+.|+|...
T Consensus 120 eiPFe~Is-------ELeWlGSGaQGAVF~Grl~-netVAVKKV~elk------ETdIKHLRkLkH~NII~FkGVCtqs- 184 (904)
T KOG4721|consen 120 EIPFEEIS-------ELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK------ETDIKHLRKLKHPNIITFKGVCTQS- 184 (904)
T ss_pred cCCHHHhh-------hhhhhccCcccceeeeecc-CceehhHHHhhhh------hhhHHHHHhccCcceeeEeeeecCC-
Confidence 35666643 4578999999999999997 6899999985321 3478889999999999999999753
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
.-.++|||||+.|-|...|+.. .+++......+..+||.||.|||.+ .|||||||+-||||..+-.+||
T Consensus 185 PcyCIiMEfCa~GqL~~VLka~--------~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKI 253 (904)
T KOG4721|consen 185 PCYCIIMEFCAQGQLYEVLKAG--------RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKI 253 (904)
T ss_pred ceeEEeeeccccccHHHHHhcc--------CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEe
Confidence 4567999999999999999754 3477777888899999999999998 9999999999999999999999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||..+...+..+ +..++||-.|||
T Consensus 254 sDFGTS~e~~~~ST--kMSFaGTVaWMA 279 (904)
T KOG4721|consen 254 SDFGTSKELSDKST--KMSFAGTVAWMA 279 (904)
T ss_pred ccccchHhhhhhhh--hhhhhhhHhhhC
Confidence 99999999866522 566899999988
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.6e-24 Score=236.11 Aligned_cols=171 Identities=17% Similarity=0.232 Sum_probs=137.5
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCC-----
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHET----- 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~----- 581 (693)
.++|...+.||+|+||.||+|+. .+|+.||||++...... ...+.+|+.++..++|+|||++...+...+.
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~ 110 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPEN 110 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCccc
Confidence 45688889999999999999985 57999999998654322 3568899999999999999998876643221
Q ss_pred --eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceE
Q 035786 582 --EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 582 --~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~k 659 (693)
..++||||+++|+|.++++.... ....+++.....|+.|++.||+|||.. +|+||||||+|||+++++.+|
T Consensus 111 ~~~i~lV~Ey~~~gsL~~~l~~~~~----~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 111 VLMIALVLDYANAGDLRQEIKSRAK----TNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred ceEEEEEEeCCCCCcHHHHHHHhhc----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEE
Confidence 25799999999999999975322 124588999999999999999999988 999999999999999999999
Q ss_pred ECCcccccccCCCCc-ceeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
|+|||+++.+..... ......+||+.|+|
T Consensus 184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~a 213 (496)
T PTZ00283 184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVA 213 (496)
T ss_pred EEecccCeeccccccccccccccCCcceeC
Confidence 999999988643221 12233567777765
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=215.57 Aligned_cols=142 Identities=23% Similarity=0.309 Sum_probs=122.3
Q ss_pred cccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 520 IKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 520 ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
||+|+||.||++... +|+.||+|++..... ..+.+..|++++.+++||||+++.+++.+ +...++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~-~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES-KTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec-CCeEEEEEecCCCCC
Confidence 699999999999864 689999999864322 13456679999999999999999987764 567899999999999
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
|.++++.... ..++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 80 L~~~~~~~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~ 147 (277)
T cd05607 80 LKYHIYNVGE------RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKD 147 (277)
T ss_pred HHHHHHhccc------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCC
Confidence 9998864322 3589999999999999999999987 999999999999999999999999999887643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-23 Score=216.57 Aligned_cols=140 Identities=24% Similarity=0.350 Sum_probs=118.2
Q ss_pred ccccCCeeeEEEEEeCC-------------------------CcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccce
Q 035786 519 LIKKGHSGDLFKGTLAG-------------------------GTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPL 572 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~-------------------------g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l 572 (693)
.||+|+||.||+|++.. ...||||.+...... .++|.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999998521 135899988653332 4578999999999999999999
Q ss_pred eEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 573 ~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
+|+|.+ +...++||||+++|+|..+++... ..++|..+.+++.|+++||+|||+. +|+||||||+||++
T Consensus 82 ~~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill 150 (274)
T cd05076 82 HGVCVR-GSENIMVEEFVEHGPLDVCLRKEK-------GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILL 150 (274)
T ss_pred EEEEEe-CCceEEEEecCCCCcHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEE
Confidence 999986 467899999999999999986432 3488999999999999999999987 99999999999999
Q ss_pred CCCC-------ceEECCccccccc
Q 035786 653 DDKF-------EVRLGSLSELHAQ 669 (693)
Q Consensus 653 d~~~-------~~ki~Dfgla~~~ 669 (693)
++++ .+|++|||+++..
T Consensus 151 ~~~~~~~~~~~~~kl~d~g~~~~~ 174 (274)
T cd05076 151 ARLGLAEGTSPFIKLSDPGVSFTA 174 (274)
T ss_pred eccCcccCccceeeecCCcccccc
Confidence 8653 3799999998754
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-23 Score=213.37 Aligned_cols=147 Identities=22% Similarity=0.405 Sum_probs=131.2
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...++||+|+||.||+|...+++.||||.+.......++|.+|++++++++|+||+++.+++. +...++||||+++
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~~ 84 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT--QEPIYIITEYMEN 84 (260)
T ss_pred HceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc--cCCcEEEEEcCCC
Confidence 46667899999999999999888999999999876666778999999999999999999998763 3568999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|+|.++++.... ..++|.++..++.+++.||+|||.. +++||||||+||++++++.++++|||+++...
T Consensus 85 ~~L~~~~~~~~~------~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 85 GSLVDFLKTPEG------IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIE 153 (260)
T ss_pred CCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecC
Confidence 999999865321 3589999999999999999999987 89999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-23 Score=210.46 Aligned_cols=141 Identities=27% Similarity=0.462 Sum_probs=125.0
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCCh
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDL 595 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL 595 (693)
++||+|+||.||+|...++..||+|.+...... ...|.+|++++.+++||||++++++|.+ ....++||||+++|+|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ-RQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec-CCccEEEEECCCCCcH
Confidence 369999999999999888999999998654322 3578999999999999999999999875 4678999999999999
Q ss_pred hhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 596 ASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 596 ~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
.+++.... ..++|.++..++.+++.||.|+|.. +++||||||+||++++++.+|++|||+++..
T Consensus 80 ~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 143 (250)
T cd05085 80 LSFLRKKK-------DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQE 143 (250)
T ss_pred HHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceec
Confidence 99986432 2489999999999999999999987 9999999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-23 Score=216.65 Aligned_cols=146 Identities=24% Similarity=0.279 Sum_probs=126.5
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
|...+.||+|+||+||+|.. .+++.||||.+...... .+.+.+|++++.+++|+||+++.+++.. ++..++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET-KDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec-CCEEEEEEE
Confidence 55567899999999999986 46899999998654322 3457889999999999999999887765 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++.... ..++|.....++.|++.||.|||.. +|+||||||+||++++++.+||+|||+++.
T Consensus 81 ~~~~~~L~~~~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~ 151 (285)
T cd05632 81 IMNGGDLKFHIYNMGN------PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVK 151 (285)
T ss_pred eccCccHHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCccee
Confidence 9999999998875321 3599999999999999999999987 899999999999999999999999999876
Q ss_pred c
Q 035786 669 Q 669 (693)
Q Consensus 669 ~ 669 (693)
.
T Consensus 152 ~ 152 (285)
T cd05632 152 I 152 (285)
T ss_pred c
Confidence 5
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-23 Score=229.84 Aligned_cols=159 Identities=21% Similarity=0.235 Sum_probs=131.2
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
.|...+.||+|+||.||+|+.. .++.||||... ...+.+|++++++++|+|||++++++.. +...++||||+.
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L~HpnIv~l~~~~~~-~~~~~lv~e~~~ 243 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRLSHPAVLALLDVRVV-GGLTCLVLPKYR 243 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHCCCCCCCcEEEEEEE-CCEEEEEEEccC
Confidence 4777788999999999999975 47899999643 2346789999999999999999999876 467899999995
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
|+|.+++.... ..++|.++..|+.|+++||+|||.. +||||||||+|||++.++.+||+|||+++....
T Consensus 244 -~~L~~~l~~~~-------~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 244 -SDLYTYLGARL-------RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred -CCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 79998886432 3599999999999999999999988 899999999999999999999999999987633
Q ss_pred CC-cceeeeeehhhhhhh
Q 035786 672 SH-QNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~-~~~~~~~~~~~~y~a 688 (693)
.. ........||+.|+|
T Consensus 313 ~~~~~~~~~~~GT~~Y~A 330 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNA 330 (461)
T ss_pred ccccccccccCCCcCCcC
Confidence 21 111223456666665
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-24 Score=224.42 Aligned_cols=165 Identities=21% Similarity=0.308 Sum_probs=140.0
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+|...++||+|+||.++..+. .+++.+++|++...... ++...+|+.++++++|||||.+..-+.+.+...++|||
T Consensus 5 ~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~ 84 (426)
T KOG0589|consen 5 NYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVME 84 (426)
T ss_pred hhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEe
Confidence 455677899999999998875 35789999999764432 55788999999999999999999988775444899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|++||++.+.+.+.+. ..++..+.+++..|+..|+.|||++ +|+|||||++||++..+..+|++|||+||.
T Consensus 85 Y~eGg~l~~~i~~~k~------~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~ 155 (426)
T KOG0589|consen 85 YCEGGDLAQLIKEQKG------VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKI 155 (426)
T ss_pred ecCCCCHHHHHHHHhh------ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhh
Confidence 9999999999987552 3478888899999999999999988 999999999999999999999999999999
Q ss_pred cCCCCcceeeeeehhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQ 687 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~ 687 (693)
.+..... ...++|||.||
T Consensus 156 l~~~~~~-a~tvvGTp~Ym 173 (426)
T KOG0589|consen 156 LNPEDSL-ASTVVGTPYYM 173 (426)
T ss_pred cCCchhh-hheecCCCccc
Confidence 8665432 34478898886
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=216.15 Aligned_cols=152 Identities=25% Similarity=0.355 Sum_probs=127.6
Q ss_pred CCccCccccCCeeeEEEEEe-----CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-----AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-----~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
|+..+.||+|+||.||+|+. .++..||+|.+...... .++|.+|++++++++||||+++++++.. +...++|
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv 85 (283)
T cd05090 7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ-EQPVCML 85 (283)
T ss_pred ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec-CCceEEE
Confidence 56667899999999999984 34678999998643322 3578999999999999999999998875 4678999
Q ss_pred EccCCCCChhhhhhccCCCC---------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 587 YKYMVCGDLASSLHRVTDLE---------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~---------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
|||+++|+|.+++....... ......++|.+.+.++.+++.||+|||+. +|+||||||+||++++++.
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCCc
Confidence 99999999999996432100 01124589999999999999999999988 8999999999999999999
Q ss_pred eEECCccccccc
Q 035786 658 VRLGSLSELHAQ 669 (693)
Q Consensus 658 ~ki~Dfgla~~~ 669 (693)
+|++|||+++..
T Consensus 163 ~kl~dfg~~~~~ 174 (283)
T cd05090 163 VKISDLGLSREI 174 (283)
T ss_pred EEeccccccccc
Confidence 999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-23 Score=212.25 Aligned_cols=142 Identities=26% Similarity=0.376 Sum_probs=122.8
Q ss_pred CccccCCeeeEEEEEeCCC-----------cEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 518 NLIKKGHSGDLFKGTLAGG-----------TTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g-----------~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
+.||+|+||.||+|+..+. ..|++|.+.......+.|.+|++++++++||||++++|+|.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR--DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec--CCcEEE
Confidence 3689999999999997543 258888776544336789999999999999999999999876 567999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC-------ceE
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF-------EVR 659 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~-------~~k 659 (693)
|||+++|+|.++++... ..+++..+..++.|++.||+|||.. +|+||||||+||+++.++ .+|
T Consensus 79 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~k 148 (259)
T cd05037 79 EEYVKFGPLDVFLHREK-------NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIK 148 (259)
T ss_pred EEcCCCCcHHHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEE
Confidence 99999999999997532 2589999999999999999999987 999999999999999888 799
Q ss_pred ECCcccccccCC
Q 035786 660 LGSLSELHAQGD 671 (693)
Q Consensus 660 i~Dfgla~~~~~ 671 (693)
++|||+++....
T Consensus 149 l~Dfg~a~~~~~ 160 (259)
T cd05037 149 LSDPGIPITVLS 160 (259)
T ss_pred eCCCCccccccc
Confidence 999999988643
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-23 Score=220.37 Aligned_cols=158 Identities=23% Similarity=0.250 Sum_probs=125.1
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHH-HHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELD-LFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
+.||+|+||.||+|+.. +++.||+|.+..... ...++.+|.. ++..++|+||+++++++.+ ++..++||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~-~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-CCeEEEEEeCCC
Confidence 36999999999999964 578999999864321 1234555544 5678999999999988765 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.++++... .+...+...++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 80 ~~~L~~~~~~~~--------~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~ 148 (325)
T cd05602 80 GGELFYHLQRER--------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 148 (325)
T ss_pred CCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccccc
Confidence 999999987532 366777788999999999999998 999999999999999999999999999986422
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
... .....+||+.|+|
T Consensus 149 ~~~-~~~~~~gt~~y~a 164 (325)
T cd05602 149 HNG-TTSTFCGTPEYLA 164 (325)
T ss_pred CCC-CcccccCCccccC
Confidence 221 1233456666665
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-24 Score=222.44 Aligned_cols=162 Identities=22% Similarity=0.369 Sum_probs=138.1
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
|.....||+|+||.||||.. ..++.||+|.+...... .++..+|+.+++.++|+||.+++|.++. +...+++||||
T Consensus 15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~-g~~LwiiMey~ 93 (467)
T KOG0201|consen 15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLK-GTKLWIIMEYC 93 (467)
T ss_pred cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheee-cccHHHHHHHh
Confidence 55667899999999999986 46899999999865544 4688899999999999999999998875 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
.+|++.+.|.... .++.....-|..++..|+.|||.+ +.||||||+.|||+.+++.+|++|||++..+.
T Consensus 94 ~gGsv~~lL~~~~--------~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~ 162 (467)
T KOG0201|consen 94 GGGSVLDLLKSGN--------ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLT 162 (467)
T ss_pred cCcchhhhhccCC--------CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeee
Confidence 9999999997533 234445555788999999999999 99999999999999999999999999999886
Q ss_pred CCCcceeeeeehhhhhhh
Q 035786 671 DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~~~~~~~~~~y~a 688 (693)
...... .+++|||+|||
T Consensus 163 ~~~~rr-~tfvGTPfwMA 179 (467)
T KOG0201|consen 163 NTVKRR-KTFVGTPFWMA 179 (467)
T ss_pred chhhcc-ccccccccccc
Confidence 555443 55899999998
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-23 Score=219.45 Aligned_cols=158 Identities=20% Similarity=0.235 Sum_probs=129.0
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||.||+|+.. +++.||||.+.... ...+.+.+|++++..+ +||||+++++++.+ .+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT-KDRLFFVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-CCEEEEEEcCCC
Confidence 36999999999999975 57899999987532 2245677899999888 79999999998765 468899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++... ..++|.+...++.+++.||+|||.. +|+||||||+||++++++.+||+|||+++....
T Consensus 80 ~~~L~~~~~~~--------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 148 (318)
T cd05570 80 GGDLMFHIQRS--------GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL 148 (318)
T ss_pred CCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCc
Confidence 99999988653 2489999999999999999999988 999999999999999999999999999876422
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
.... ....+|++.|+|
T Consensus 149 ~~~~-~~~~~g~~~y~a 164 (318)
T cd05570 149 GGVT-TSTFCGTPDYIA 164 (318)
T ss_pred CCCc-ccceecCccccC
Confidence 1111 222456666654
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-23 Score=218.42 Aligned_cols=145 Identities=20% Similarity=0.351 Sum_probs=125.6
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.|...+.||+|+||.||+|+.. +++.||||++..... ....+.+|++++++++||||+++++++.. ++..++||||
T Consensus 7 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 85 (309)
T cd07872 7 TYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHT-DKSLTLVFEY 85 (309)
T ss_pred ceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEee-CCeEEEEEeC
Confidence 4677789999999999999864 578999999865432 24568899999999999999999998875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++ +|.+++.... ..+++.....++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 86 ~~~-~l~~~~~~~~-------~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 154 (309)
T cd07872 86 LDK-DLKQYMDDCG-------NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAK 154 (309)
T ss_pred CCC-CHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceec
Confidence 985 8888886432 3478999999999999999999988 9999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-23 Score=213.22 Aligned_cols=142 Identities=23% Similarity=0.385 Sum_probs=119.6
Q ss_pred ccccCCeeeEEEEEeCCC---cEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 519 LIKKGHSGDLFKGTLAGG---TTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~g---~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
.||+|+||.||+|...++ ..+++|.+..... ..+.|.+|+++++.++|||||+++++|.+ ....++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-AIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC-CCccEEEEecCCCC
Confidence 599999999999986443 3567777654332 25689999999999999999999999875 46789999999999
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
+|.+++++.... ....++.....++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 81 ~L~~~l~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~ 148 (268)
T cd05086 81 DLKSYLSQEQWH----RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPS 148 (268)
T ss_pred cHHHHHHhhhcc----cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccc
Confidence 999999753211 13467778889999999999999987 899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.7e-24 Score=234.64 Aligned_cols=150 Identities=19% Similarity=0.330 Sum_probs=126.7
Q ss_pred CCCccCccccCCeeeEEEEEeCCC-cEEEEEEeccccc-CHHHHHHHHHHHhcCC-CCCccceeEE-EEcC--C---Cee
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGG-TTVVVKKVSLHSF-KKESYMMELDLFSRVS-HARLVPLLGQ-CLEH--E---TEK 583 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g-~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~-H~niv~l~g~-~~~~--~---~~~ 583 (693)
+....++|.+|||+.||.|+...+ ..||+|++-.... .-+...+||++|++++ |+|||.+++. .... . -++
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 345678999999999999998665 9999999854432 2467889999999997 9999999983 2211 1 267
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
+|.||||++|+|-|++..... ..|+..+.++|+.++++|+++||. +.|||||||||.+||||+.++..|+|||
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq------~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQ------TRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred EeehhhccCCcHHHHHHHHHh------ccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcc
Confidence 899999999999999975332 349999999999999999999996 6999999999999999999999999999
Q ss_pred cccccc
Q 035786 664 SELHAQ 669 (693)
Q Consensus 664 gla~~~ 669 (693)
|-|-..
T Consensus 191 GSatt~ 196 (738)
T KOG1989|consen 191 GSATTK 196 (738)
T ss_pred cccccc
Confidence 987764
|
|
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.8e-23 Score=213.90 Aligned_cols=147 Identities=22% Similarity=0.361 Sum_probs=127.2
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCc----EEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGT----TVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~----~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
.+|...+.||+|+||.||+|++ ++|+ .||||.+...... .+++.+|+.++..++|+||++++++|.. ...+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~ 84 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT--STVQ 84 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC--CCcE
Confidence 3477788999999999999985 4454 4899998653332 4678999999999999999999999974 4578
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+++||+++|+|.++++... ..+++.+++.++.|++.||+|||+. +|+||||||+|||++++..+||+|||
T Consensus 85 l~~~~~~~g~l~~~l~~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG 154 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK-------DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFG 154 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCC
Confidence 9999999999999997532 2489999999999999999999988 99999999999999999999999999
Q ss_pred cccccC
Q 035786 665 ELHAQG 670 (693)
Q Consensus 665 la~~~~ 670 (693)
+++...
T Consensus 155 ~~~~~~ 160 (279)
T cd05109 155 LARLLD 160 (279)
T ss_pred ceeecc
Confidence 998763
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-23 Score=222.77 Aligned_cols=165 Identities=21% Similarity=0.291 Sum_probs=138.7
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.+..|.....||+|.|++|..|+. ..|..||+|.+++.... .+.+.+|+++|..++|||||+++.+.. .+...|+
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~-t~~~lyl 132 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE-TEATLYL 132 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee-ecceeEE
Confidence 345677788999999999999985 46899999999876544 456899999999999999999999765 4578999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+.+|.+++||..... ........+..|+.+|++|+|.+ .|||||||+.|||||.++++||+|||+
T Consensus 133 V~eya~~ge~~~yl~~~gr--------~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgf 201 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGR--------MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGF 201 (596)
T ss_pred EEEeccCchhHHHHHhccc--------chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeecccc
Confidence 9999999999999987543 22244456778899999999999 899999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
.-++..... ...+||++.|.|
T Consensus 202 S~~~~~~~~--lqt~cgsppyAa 222 (596)
T KOG0586|consen 202 STFFDYGLM--LQTFCGSPPYAA 222 (596)
T ss_pred ceeeccccc--ccccCCCCCccC
Confidence 988753333 445889999876
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.4e-23 Score=210.97 Aligned_cols=139 Identities=21% Similarity=0.356 Sum_probs=121.5
Q ss_pred cccCCeeeEEEEEeC---CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 520 IKKGHSGDLFKGTLA---GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 520 ig~G~~G~Vy~~~~~---~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
||+|+||.||+|++. ++..||||.+...... .++|.+|++++++++|+||++++++|. ....++||||+++|+
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~--~~~~~lv~e~~~~~~ 80 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE--AEALMLVMEMASGGP 80 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc--CCCeEEEEEeCCCCC
Confidence 899999999999863 3567999998654332 467999999999999999999999874 346899999999999
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|.++++... ..+++.++++++.+++.||+|||+. +++||||||+||+++.+..+|++|||+++...
T Consensus 81 L~~~l~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 146 (257)
T cd05115 81 LNKFLSGKK-------DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALG 146 (257)
T ss_pred HHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCcccccc
Confidence 999997432 3589999999999999999999988 89999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.6e-23 Score=208.73 Aligned_cols=146 Identities=25% Similarity=0.414 Sum_probs=128.7
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|..+ |..||+|.+.... ..+.|.+|++++++++|+|++++++++...++..++|+||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~ 84 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 84 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCC
Confidence 4667789999999999999875 7889999886432 3567999999999999999999999877655678999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|+|.++++.... ..++|.++.+++.+++.||+|||.. +|+||||||+||++++++.+|++|||+++..
T Consensus 85 ~~L~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~ 152 (256)
T cd05082 85 GSLVDYLRSRGR------SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 152 (256)
T ss_pred CcHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceec
Confidence 999999975322 3489999999999999999999988 8999999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.8e-23 Score=211.53 Aligned_cols=148 Identities=18% Similarity=0.333 Sum_probs=130.6
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|...++..||+|.+.......+.|.+|++++++++|+||+++.+++.+ ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~v~e~~~ 83 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITEFMA 83 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC--CCeEEEEEeCC
Confidence 3467788999999999999998888889999987655456789999999999999999999998764 56899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|+|.+++..... ..++|.++..++.+++.||+|||+. +++||||||+||+++.++.+|++|||+++...
T Consensus 84 ~~~L~~~~~~~~~------~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 84 KGSLLDFLKSDEG------SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 153 (260)
T ss_pred CCcHHHHHHhCCc------cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeecc
Confidence 9999999975321 3589999999999999999999987 89999999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.8e-23 Score=210.00 Aligned_cols=149 Identities=23% Similarity=0.333 Sum_probs=130.3
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+|+..+.||+|+||.||+|+.. +|+.||+|.+.... ...+++.+|++++++++||||+++++++.+ ++..++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD-KGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc-CCEEEEEEE
Confidence 3566788999999999999974 68999999986432 225679999999999999999999998875 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++++|.++++.... ..+++.+..+++.+++.||.|||.. +|+||||||+||++++++.+|++|||+++.
T Consensus 80 ~~~~~~L~~~l~~~~~------~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~ 150 (256)
T cd08529 80 YAENGDLHKLLKMQRG------RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKL 150 (256)
T ss_pred eCCCCcHHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEccccccee
Confidence 9999999999986421 3589999999999999999999987 999999999999999999999999999987
Q ss_pred cCC
Q 035786 669 QGD 671 (693)
Q Consensus 669 ~~~ 671 (693)
...
T Consensus 151 ~~~ 153 (256)
T cd08529 151 LSD 153 (256)
T ss_pred ccC
Confidence 643
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.9e-23 Score=213.12 Aligned_cols=154 Identities=19% Similarity=0.232 Sum_probs=131.0
Q ss_pred HHHHhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 507 LLRATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 507 l~~at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
++.++.++....+||+|+||.||+|+.. ++..||||.+...... .+.+.+|++++++++|+||++++++|.. ++..+
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~ 81 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSE-NGFFK 81 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeecc-CCEEE
Confidence 3446777888889999999999999964 5788999998754432 4679999999999999999999999875 46789
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-CCceEECCc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-KFEVRLGSL 663 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~-~~~~ki~Df 663 (693)
+|+||+++|+|.++++.... ....++..+..++.|++.|++|||+. +|+||||||+||+++. +..+||+||
T Consensus 82 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~df 153 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWG-----PLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDF 153 (268)
T ss_pred EEEecCCCCCHHHHHHHhcc-----cCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecc
Confidence 99999999999999975321 11138888999999999999999987 9999999999999986 679999999
Q ss_pred cccccc
Q 035786 664 SELHAQ 669 (693)
Q Consensus 664 gla~~~ 669 (693)
|++...
T Consensus 154 g~~~~~ 159 (268)
T cd06624 154 GTSKRL 159 (268)
T ss_pred hhheec
Confidence 998765
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-23 Score=229.24 Aligned_cols=165 Identities=15% Similarity=0.268 Sum_probs=127.7
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcC-----C--Ce
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEH-----E--TE 582 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-----~--~~ 582 (693)
..+|...++||+|+||.||+|.. .+++.||||++.... ....+|+.++++++|||||+++++++.. + ..
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 35688889999999999999996 468899999985432 2345799999999999999999987532 1 13
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEEC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLG 661 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~ 661 (693)
.++||||+++ +|.+++..... ....+++.....++.|++.||+|||+. +|+||||||+|||++.+ ..+||+
T Consensus 142 l~lvmE~~~~-~l~~~~~~~~~----~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 142 LNVVMEFIPQ-TVHKYMKHYAR----NNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred EEEEEecCCc-cHHHHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeee
Confidence 5689999984 78777753211 114589999999999999999999988 89999999999999966 479999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++.+..... .....+|++|||
T Consensus 214 DFGla~~~~~~~~--~~~~~~t~~y~a 238 (440)
T PTZ00036 214 DFGSAKNLLAGQR--SVSYICSRFYRA 238 (440)
T ss_pred ccccchhccCCCC--cccCCCCcCccC
Confidence 9999997633222 122345555554
|
|
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-23 Score=214.73 Aligned_cols=152 Identities=24% Similarity=0.383 Sum_probs=127.2
Q ss_pred CCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
|...+.||+|+||.||+|+.. +...||+|.+...... .++|.+|++++++++|||||+++++|.. ++..++
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~l 80 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ-DGPLLL 80 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec-CCCcEE
Confidence 566789999999999999852 2357899988654322 4578999999999999999999998875 467899
Q ss_pred EEccCCCCChhhhhhccCCCC----------------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCC
Q 035786 586 VYKYMVCGDLASSLHRVTDLE----------------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASS 649 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~----------------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~N 649 (693)
|+||+++|+|.+++....... ......++|.+.+.++.+++.|++|||+. +|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 999999999999987532110 11124589999999999999999999987 99999999999
Q ss_pred eeeCCCCceEECCccccccc
Q 035786 650 ILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 650 ILld~~~~~ki~Dfgla~~~ 669 (693)
|++++++.+||+|||+++..
T Consensus 158 ill~~~~~~kl~dfg~~~~~ 177 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDV 177 (290)
T ss_pred EEEcCCCcEEeccccccccc
Confidence 99999999999999999865
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-23 Score=216.20 Aligned_cols=161 Identities=20% Similarity=0.249 Sum_probs=136.0
Q ss_pred cCHHHHHHHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcC
Q 035786 502 FTYEQLLRATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEH 579 (693)
Q Consensus 502 ~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~ 579 (693)
+.++++.+++++|+..+.||+|+||.||+++. .+++.||+|.+.......+++.+|++++.++ +||||++++++|...
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 44455666788899999999999999999986 4588999998865443456788999999999 699999999988532
Q ss_pred ----CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC
Q 035786 580 ----ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK 655 (693)
Q Consensus 580 ----~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~ 655 (693)
++..++||||+++|+|.++++.... ....+++.....++.++++|+.|||+. +|+||||||+||+++++
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~ 160 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLK----RGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTE 160 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhc----cCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCC
Confidence 3457999999999999998864321 113588999999999999999999988 99999999999999999
Q ss_pred CceEECCccccccc
Q 035786 656 FEVRLGSLSELHAQ 669 (693)
Q Consensus 656 ~~~ki~Dfgla~~~ 669 (693)
+.+|++|||+++..
T Consensus 161 ~~~kl~dfg~~~~~ 174 (286)
T cd06638 161 GGVKLVDFGVSAQL 174 (286)
T ss_pred CCEEEccCCceeec
Confidence 99999999998875
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.89 E-value=6e-23 Score=210.86 Aligned_cols=142 Identities=29% Similarity=0.474 Sum_probs=122.5
Q ss_pred CccccCCeeeEEEEEeCC----CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||.||+|+..+ +..||+|++..... ..+.|.+|+.++++++||||++++++|...++..++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998632 45799999854322 246789999999999999999999988755566899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+|+|.+++++.. ..+++..++.++.+++.|++|||+. +|+||||||+|||+++++.+|++|||+++..
T Consensus 81 ~~~L~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 81 HGDLRNFIRSET-------HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred CCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccc
Confidence 999999997532 2368888999999999999999987 9999999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.1e-23 Score=213.73 Aligned_cols=147 Identities=23% Similarity=0.396 Sum_probs=127.4
Q ss_pred CCccCccccCCeeeEEEEEe-----CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-----AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-----~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~l 585 (693)
|...+.||+|+||.||++++ .++..||+|.+...... .+.|.+|++++++++||||+++.++|.+. +...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 56678899999999999985 34788999998654322 45799999999999999999999988754 245789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.+.. ..++|.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 86 v~e~~~g~~L~~~l~~~~-------~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~ 155 (284)
T cd05079 86 IMEFLPSGSLKEYLPRNK-------NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 155 (284)
T ss_pred EEEccCCCCHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcc
Confidence 999999999999996432 2489999999999999999999988 999999999999999999999999999
Q ss_pred ccccC
Q 035786 666 LHAQG 670 (693)
Q Consensus 666 a~~~~ 670 (693)
++...
T Consensus 156 ~~~~~ 160 (284)
T cd05079 156 TKAIE 160 (284)
T ss_pred ccccc
Confidence 98763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.1e-23 Score=211.00 Aligned_cols=151 Identities=23% Similarity=0.403 Sum_probs=126.8
Q ss_pred CCccCccccCCeeeEEEEEeCC----CcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCC-----
Q 035786 514 FSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHET----- 581 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~----- 581 (693)
|...++||+|+||.||+|+... +..||||+++..... .++|.+|++.+++++|+||+++++++.+.+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 3456789999999999998642 367999998754322 3579999999999999999999998875332
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++|+||+++|+|.+++..... ......+++.+...++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRL--GGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhc--cCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEEC
Confidence 26899999999999999965321 11224689999999999999999999988 89999999999999999999999
Q ss_pred Cccccccc
Q 035786 662 SLSELHAQ 669 (693)
Q Consensus 662 Dfgla~~~ 669 (693)
|||+++.+
T Consensus 156 dfg~~~~~ 163 (273)
T cd05035 156 DFGLSKKI 163 (273)
T ss_pred Cccceeec
Confidence 99999876
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-23 Score=215.64 Aligned_cols=155 Identities=22% Similarity=0.356 Sum_probs=129.0
Q ss_pred hCCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCe
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETE 582 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 582 (693)
+++|...+.||+|+||.||+|... .+..||||.+...... ..+|.+|++++++++||||+++++++.+. ..
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~ 83 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG-QP 83 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-CC
Confidence 445777889999999999999753 2458999988644322 34688999999999999999999988754 57
Q ss_pred eEEEEccCCCCChhhhhhccCCCC--CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLE--DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~--~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
.++||||+++|+|.++++...... .......++....+++.|++.||+|||+. +|+||||||+||++++++++|+
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEE
Confidence 899999999999999997532211 11234578888999999999999999987 9999999999999999999999
Q ss_pred CCccccccc
Q 035786 661 GSLSELHAQ 669 (693)
Q Consensus 661 ~Dfgla~~~ 669 (693)
+|||+++..
T Consensus 161 ~Dfg~~~~~ 169 (288)
T cd05061 161 GDFGMTRDI 169 (288)
T ss_pred CcCCccccc
Confidence 999999865
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.8e-23 Score=210.81 Aligned_cols=149 Identities=25% Similarity=0.434 Sum_probs=133.1
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|...++..||||.+.......++|.+|++++++++|+||+++++++.+ +...++||||++
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~~ 84 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSE-EEPIYIVTEYMS 84 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeec-CCceEEEEeccC
Confidence 4577778999999999999998888899999998766667789999999999999999999998764 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|+|.++++.... ..++|.++..++.+++.|++|||.. +|+||||||+||++++++.+|++|||+++...
T Consensus 85 ~~~L~~~i~~~~~------~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~ 154 (261)
T cd05034 85 KGSLLDFLKSGEG------KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIE 154 (261)
T ss_pred CCCHHHHHhcccc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceecc
Confidence 9999999975321 3589999999999999999999988 89999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-23 Score=213.65 Aligned_cols=151 Identities=21% Similarity=0.378 Sum_probs=133.4
Q ss_pred HhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+..+|...+.||+|+||.||+|...++..||+|.+..... ..+++.+|++++.+++|+||+++++++.+ ....++|||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSV-GEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEec-CCCeEEEEe
Confidence 3445777889999999999999998899999999876544 35679999999999999999999998875 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++.... ..++|.++..++.+++.|++|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 83 ~~~~~~L~~~~~~~~~------~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~ 153 (261)
T cd05148 83 LMEKGSLLAFLRSPEG------QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARL 153 (261)
T ss_pred ecccCCHHHHHhcCCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhh
Confidence 9999999999975322 3589999999999999999999987 899999999999999999999999999987
Q ss_pred cC
Q 035786 669 QG 670 (693)
Q Consensus 669 ~~ 670 (693)
..
T Consensus 154 ~~ 155 (261)
T cd05148 154 IK 155 (261)
T ss_pred cC
Confidence 63
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.7e-23 Score=219.52 Aligned_cols=156 Identities=20% Similarity=0.188 Sum_probs=125.8
Q ss_pred cccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcC---CCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 520 IKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRV---SHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 520 ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l---~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
||+|+||.||+|+.. +|+.||||++...... ...+..|.+++.+. +||||+++++++.+ +...++||||++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~-~~~~~lv~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT-DSDLYLVTDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec-CCeEEEEEcCCC
Confidence 799999999999864 6899999998643221 23456677777665 69999999987765 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++... ..+++.....++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 80 ~g~L~~~l~~~--------~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~ 148 (330)
T cd05586 80 GGELFWHLQKE--------GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLT 148 (330)
T ss_pred CChHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCC
Confidence 99999988643 2488999999999999999999988 999999999999999999999999999986522
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
.... ....+||+.|+|
T Consensus 149 ~~~~-~~~~~gt~~y~a 164 (330)
T cd05586 149 DNKT-TNTFCGTTEYLA 164 (330)
T ss_pred CCCC-ccCccCCccccC
Confidence 2211 223456777765
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-23 Score=214.17 Aligned_cols=147 Identities=23% Similarity=0.285 Sum_probs=127.0
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
|+..++||+|+||.||++... +++.||||++...... .+.+.+|++++.+++|+|++++.+++.+ ++..++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET-KDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec-CCEEEEEEE
Confidence 566788999999999999864 6899999998653222 3457889999999999999999998875 468899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.++++|||+++.
T Consensus 81 ~~~g~~L~~~l~~~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~ 151 (285)
T cd05630 81 LMNGGDLKFHIYHMGE------AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVH 151 (285)
T ss_pred ecCCCcHHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceee
Confidence 9999999999864321 3489999999999999999999987 999999999999999999999999999877
Q ss_pred cC
Q 035786 669 QG 670 (693)
Q Consensus 669 ~~ 670 (693)
..
T Consensus 152 ~~ 153 (285)
T cd05630 152 VP 153 (285)
T ss_pred cC
Confidence 53
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-23 Score=213.69 Aligned_cols=153 Identities=25% Similarity=0.398 Sum_probs=129.3
Q ss_pred CCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||.||++.. .++..||||.+...... .+.|.+|++++.+++||||++++++|.+ .+..++
T Consensus 6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 84 (288)
T cd05093 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-GDPLIM 84 (288)
T ss_pred HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCccEE
Confidence 467788999999999999984 23467999998654332 4579999999999999999999999875 467899
Q ss_pred EEccCCCCChhhhhhccCCC-----CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 586 VYKYMVCGDLASSLHRVTDL-----EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~-----~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
||||+++|+|.++++..... .......++|.++..++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEe
Confidence 99999999999999753210 011224599999999999999999999988 8999999999999999999999
Q ss_pred CCccccccc
Q 035786 661 GSLSELHAQ 669 (693)
Q Consensus 661 ~Dfgla~~~ 669 (693)
+|||+++..
T Consensus 162 ~dfg~~~~~ 170 (288)
T cd05093 162 GDFGMSRDV 170 (288)
T ss_pred ccCCccccc
Confidence 999999865
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.6e-23 Score=212.29 Aligned_cols=153 Identities=29% Similarity=0.478 Sum_probs=128.5
Q ss_pred CCCccCccccCCeeeEEEEEeCC------CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~------g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
+|...+.||+|+||.||+|...+ ...||+|.+...... .++|.+|++++.+++||||+++++++.. +...+
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK-EQPTC 84 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC-CCceE
Confidence 46667889999999999998643 257999998643322 4579999999999999999999998875 45789
Q ss_pred EEEccCCCCChhhhhhccCCCCC--------CCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC
Q 035786 585 LVYKYMVCGDLASSLHRVTDLED--------DSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF 656 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~--------~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~ 656 (693)
++|||+++|+|.+++.......+ .....+++.+...++.+++.||+|||+. +|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 99999999999999975422111 1124689999999999999999999998 899999999999999999
Q ss_pred ceEECCccccccc
Q 035786 657 EVRLGSLSELHAQ 669 (693)
Q Consensus 657 ~~ki~Dfgla~~~ 669 (693)
.+||+|||+++..
T Consensus 162 ~~~L~dfg~~~~~ 174 (283)
T cd05048 162 TVKISDFGLSRDI 174 (283)
T ss_pred cEEECCCcceeec
Confidence 9999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-23 Score=215.21 Aligned_cols=153 Identities=21% Similarity=0.408 Sum_probs=127.1
Q ss_pred CCCccCccccCCeeeEEEEEeCC---------------CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG---------------GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQ 575 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~---------------g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~ 575 (693)
+|...+.||+|+||.||++...+ ...||||++...... .+.|.+|++++.+++|+||++++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~ 85 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGV 85 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence 46677889999999999987532 235899998653222 4579999999999999999999999
Q ss_pred EEcCCCeeEEEEccCCCCChhhhhhccCCC----CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCee
Q 035786 576 CLEHETEKLLVYKYMVCGDLASSLHRVTDL----EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSIL 651 (693)
Q Consensus 576 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~----~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NIL 651 (693)
|.. ++..++||||+++|+|.++++..... .......++|.++++++.+++.|++|||.. +++||||||+||+
T Consensus 86 ~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 161 (295)
T cd05097 86 CVS-DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCL 161 (295)
T ss_pred EcC-CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEE
Confidence 875 46789999999999999999653210 001123479999999999999999999988 9999999999999
Q ss_pred eCCCCceEECCccccccc
Q 035786 652 LDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 652 ld~~~~~ki~Dfgla~~~ 669 (693)
+++++.+||+|||+++..
T Consensus 162 l~~~~~~kl~dfg~~~~~ 179 (295)
T cd05097 162 VGNHYTIKIADFGMSRNL 179 (295)
T ss_pred EcCCCcEEeccccccccc
Confidence 999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.2e-23 Score=215.50 Aligned_cols=146 Identities=22% Similarity=0.317 Sum_probs=127.7
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|...+.||+|+||.||+++.. ++..||+|.+...... .+++.+|++++.+++||||++++++|.+ ++..++||||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ey 80 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYS-DGEISICMEH 80 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCEEEEEeec
Confidence 5778889999999999999864 5888999988643222 4568899999999999999999999876 5689999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.++++.. ..+++.....++.++++||+|||+.+ +|+||||||+||++++++.+||+|||+++..
T Consensus 81 ~~~~~L~~~l~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 150 (308)
T cd06615 81 MDGGSLDQVLKKA--------GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 150 (308)
T ss_pred cCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccc
Confidence 9999999999753 24889999999999999999999732 7999999999999999999999999998875
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.4e-23 Score=210.11 Aligned_cols=146 Identities=22% Similarity=0.345 Sum_probs=128.7
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
+|...+.||+|+||.||+|+. .+|+.||+|++...... .+.+.+|+.++.+++||||+++++++.. ++..++|+||+
T Consensus 10 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-~~~~~iv~e~~ 88 (267)
T cd06646 10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLS-REKLWICMEYC 88 (267)
T ss_pred hcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEe-CCEEEEEEeCC
Confidence 467778999999999999996 56889999998654332 4568899999999999999999998875 46889999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.++++.. ..+++.++..++.|++.|+.|||+. +|+|||+||+||++++++.+||+|||+++...
T Consensus 89 ~~~~L~~~~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06646 89 GGGSLQDIYHVT--------GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKIT 157 (267)
T ss_pred CCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeec
Confidence 999999998743 2488999999999999999999987 99999999999999999999999999998763
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=209.58 Aligned_cols=141 Identities=24% Similarity=0.366 Sum_probs=119.8
Q ss_pred ccccCCeeeEEEEEeCC-------------CcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 519 LIKKGHSGDLFKGTLAG-------------GTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~-------------g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
.||+|+||.||+|++.+ ...||+|.+...... .+.|.+|+.+++.++|||||+++++|.+ +...+
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~-~~~~~ 80 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR-DVENI 80 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCCCE
Confidence 58999999999998632 235899987654332 4578899999999999999999999985 45789
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc-------
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE------- 657 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~------- 657 (693)
+||||+++|+|..+++... ..+++.++.+++.|+++||+|||+. +|+||||||+|||++.++.
T Consensus 81 lv~e~~~~~~l~~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~ 150 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS-------DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPF 150 (262)
T ss_pred EEEecccCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCce
Confidence 9999999999999887532 3489999999999999999999988 9999999999999987664
Q ss_pred eEECCcccccccC
Q 035786 658 VRLGSLSELHAQG 670 (693)
Q Consensus 658 ~ki~Dfgla~~~~ 670 (693)
+|++|||++....
T Consensus 151 ~~l~d~g~~~~~~ 163 (262)
T cd05077 151 IKLSDPGIPITVL 163 (262)
T ss_pred eEeCCCCCCcccc
Confidence 8999999987763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.8e-24 Score=216.45 Aligned_cols=165 Identities=23% Similarity=0.270 Sum_probs=141.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
+.|..-++||+|+||.||-++.+ +|+.+|.|++.+.... ..--.+|-+++.+++.+.||.+ +|.+++.+..+||
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVsl-aYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSL-AYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEE-eeeecCCCceEEE
Confidence 34778899999999999999864 6999999999754322 3356789999999999999987 5777777889999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
+..|.+|||+-+|+.... ..++.....-+|.+|+.||++||.. +||+||+||+|||||+.+.++|+|.|||
T Consensus 264 LtlMNGGDLkfHiyn~g~------~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLA 334 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN------PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLA 334 (591)
T ss_pred EEeecCCceeEEeeccCC------CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceE
Confidence 999999999999986543 3488888899999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
-.+.+... .+..+||..|||
T Consensus 335 vei~~g~~--~~~rvGT~GYMA 354 (591)
T KOG0986|consen 335 VEIPEGKP--IRGRVGTVGYMA 354 (591)
T ss_pred EecCCCCc--cccccCcccccC
Confidence 99865554 344589999998
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.89 E-value=8e-23 Score=210.77 Aligned_cols=147 Identities=20% Similarity=0.366 Sum_probs=127.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-C---CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-G---GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~---g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
+|...+.||+|+||.||+|+.. + +..||+|.++.... ..+.|.+|++++.+++||||+++.+++.+ ++..++|
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 83 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-SKPVMIV 83 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCccEEE
Confidence 4666789999999999999863 2 34799999865332 24679999999999999999999998875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++... ..+++.+...|+.+++.|++|||+. +|+||||||+||+++.++.+|++|||++
T Consensus 84 ~e~~~~~~L~~~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-------GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLS 153 (267)
T ss_pred EEcCCCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcc
Confidence 99999999999997532 2489999999999999999999988 9999999999999999999999999999
Q ss_pred cccC
Q 035786 667 HAQG 670 (693)
Q Consensus 667 ~~~~ 670 (693)
+...
T Consensus 154 ~~~~ 157 (267)
T cd05066 154 RVLE 157 (267)
T ss_pred cccc
Confidence 8764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=207.96 Aligned_cols=141 Identities=25% Similarity=0.422 Sum_probs=123.8
Q ss_pred CccccCCeeeEEEEEe-CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 518 NLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
+.||+|+||.||+|+. .+++.||+|....... ..+.|.+|++++++++||||++++++|.. +...++||||+++|+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-KQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCeEEEEeeccCCc
Confidence 3689999999999997 4689999998754322 24579999999999999999999999875 467899999999999
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|.++++... ..++|.+...++.|++.||+|||.. +|+||||||+||+++.++.+|++|||+++..
T Consensus 80 L~~~~~~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 144 (252)
T cd05084 80 FLTFLRTEG-------PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREE 144 (252)
T ss_pred HHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccc
Confidence 999996432 2489999999999999999999988 8999999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.4e-23 Score=211.94 Aligned_cols=153 Identities=24% Similarity=0.407 Sum_probs=129.9
Q ss_pred CCCccCccccCCeeeEEEEEeCC------CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~------g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
+|...+.||+|+||.||+|+..+ ++.||||.+...... .++|.+|++++.+++|+||+++++++... ...+
T Consensus 6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~ 84 (280)
T cd05049 6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEG-DPPI 84 (280)
T ss_pred HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC-CCeE
Confidence 36667889999999999998633 478999998754333 46899999999999999999999998764 6789
Q ss_pred EEEccCCCCChhhhhhccCCCC------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 585 LVYKYMVCGDLASSLHRVTDLE------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
+||||+++|+|.++++...... ......++|.+...++.+++.|++|||.. +|+||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 9999999999999997542100 11224589999999999999999999988 89999999999999999999
Q ss_pred EECCccccccc
Q 035786 659 RLGSLSELHAQ 669 (693)
Q Consensus 659 ki~Dfgla~~~ 669 (693)
|++|||+++.+
T Consensus 162 kl~d~g~~~~~ 172 (280)
T cd05049 162 KIGDFGMSRDV 172 (280)
T ss_pred EECCcccceec
Confidence 99999999865
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.7e-23 Score=227.15 Aligned_cols=158 Identities=18% Similarity=0.254 Sum_probs=124.1
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-----------------CCCcEEEEEEecccccC-HH--------------HHHHH
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-----------------AGGTTVVVKKVSLHSFK-KE--------------SYMME 557 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-----------------~~g~~vavK~l~~~~~~-~~--------------~f~~E 557 (693)
..++|+..++||+|+||.||+|.+ .+++.||||++...... .+ .+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 356799999999999999999964 23568999998653322 22 34457
Q ss_pred HHHHhcCCCCCc-----cceeEEEEcC-------CCeeEEEEccCCCCChhhhhhccCCCC----------------CCC
Q 035786 558 LDLFSRVSHARL-----VPLLGQCLEH-------ETEKLLVYKYMVCGDLASSLHRVTDLE----------------DDS 609 (693)
Q Consensus 558 i~~l~~l~H~ni-----v~l~g~~~~~-------~~~~~lv~ey~~~GsL~~~l~~~~~~~----------------~~~ 609 (693)
+.++.+++|+++ ++++|||... +...+||||||++|+|.++++...... ...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 788888887765 6788887531 245799999999999999998532100 001
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 610 LQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 610 ~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
...++|..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~ 360 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMC 360 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccc
Confidence 13468999999999999999999988 89999999999999999999999999998753
|
|
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=207.79 Aligned_cols=147 Identities=25% Similarity=0.438 Sum_probs=131.2
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|... |+.||||++.......+++.+|++++.+++|+||+++++++.+ +...++||||+++
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~~~ 84 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQ-GNPLYIVTEYMAK 84 (256)
T ss_pred hccceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcC-CCCeEEEEEecCC
Confidence 4677789999999999999875 7899999997654446689999999999999999999999875 5678999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|+|.++++.... ..++|.++..++.+++.|++|||+. +|+||||||+||++++++.+||+|||.++...
T Consensus 85 ~~L~~~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~ 153 (256)
T cd05039 85 GSLVDYLRSRGR------AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEAS 153 (256)
T ss_pred CcHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccc
Confidence 999999975331 3589999999999999999999988 99999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=207.35 Aligned_cols=140 Identities=21% Similarity=0.344 Sum_probs=122.4
Q ss_pred ccccCCeeeEEEEEe---CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 519 LIKKGHSGDLFKGTL---AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~---~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
.||+|+||.||+|.+ .++..||||+++..... .++|.+|++++++++|+||++++|+|. ++..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE--AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc--CCCcEEEEecCCC
Confidence 589999999999975 35789999998654322 467999999999999999999999874 3467899999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
|+|.+++... ..+++..+.+++.|++.|++|||.. +|+||||||+||++++++.+||+|||+++....
T Consensus 80 ~~L~~~l~~~--------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~ 147 (257)
T cd05116 80 GPLNKFLQKN--------KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGA 147 (257)
T ss_pred CcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCC
Confidence 9999999643 2488999999999999999999987 899999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.6e-23 Score=214.76 Aligned_cols=161 Identities=25% Similarity=0.289 Sum_probs=137.7
Q ss_pred cCHHHHHHHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcC
Q 035786 502 FTYEQLLRATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEH 579 (693)
Q Consensus 502 ~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~ 579 (693)
++++++..++++|...+.||+|+||.||++.. .+++.||+|.+.......+++.+|+.++.++ +|||+++++++|...
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 45566667888999999999999999999996 5688999999875444456788999999999 899999999998753
Q ss_pred C----CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC
Q 035786 580 E----TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK 655 (693)
Q Consensus 580 ~----~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~ 655 (693)
+ ...++|+||+++|+|.++++.... ....++|..+..++.+++.||+|||.. +|+||||||+||+++++
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~ 164 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLI----CGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTE 164 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC
Confidence 2 357899999999999999864221 113589999999999999999999987 99999999999999999
Q ss_pred CceEECCccccccc
Q 035786 656 FEVRLGSLSELHAQ 669 (693)
Q Consensus 656 ~~~ki~Dfgla~~~ 669 (693)
+.+||+|||+++..
T Consensus 165 ~~~kl~dfg~~~~~ 178 (291)
T cd06639 165 GGVKLVDFGVSAQL 178 (291)
T ss_pred CCEEEeecccchhc
Confidence 99999999998875
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.1e-23 Score=214.54 Aligned_cols=147 Identities=26% Similarity=0.391 Sum_probs=127.6
Q ss_pred CCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 513 NFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
+|...+.||+|+||.||+|+. .++..||||+++..... .+.|.+|+++++++ +|+||++++++|.. .+..
T Consensus 36 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~ 114 (302)
T cd05055 36 NLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI-GGPI 114 (302)
T ss_pred HeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec-CCce
Confidence 477888999999999999974 23568999998754322 45799999999999 79999999998875 4678
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++||||+++|+|.++++.... ..++|.++..++.+++.|++|||+. +|+||||||+||+++++..+|++||
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~------~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~df 185 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRE------SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDF 185 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCC
Confidence 999999999999999975321 2389999999999999999999988 8999999999999999999999999
Q ss_pred cccccc
Q 035786 664 SELHAQ 669 (693)
Q Consensus 664 gla~~~ 669 (693)
|+++..
T Consensus 186 g~~~~~ 191 (302)
T cd05055 186 GLARDI 191 (302)
T ss_pred cccccc
Confidence 999876
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=211.54 Aligned_cols=144 Identities=25% Similarity=0.421 Sum_probs=125.5
Q ss_pred CccCccccCCeeeEEEEEe-----CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEEE
Q 035786 515 SETNLIKKGHSGDLFKGTL-----AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLLV 586 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~-----~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~lv 586 (693)
...+.||+|+||+||++.+ .++..||+|.+..... ..+.|.+|++++++++||||++++++|...+ ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 5678899999999988753 3578999999875432 3567999999999999999999999886532 357899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.. ..++|.++..++.+++.|++|||+. +|+||||||+||++++++.+|++|||++
T Consensus 87 ~e~~~~~~l~~~~~~---------~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~ 154 (283)
T cd05080 87 MEYVPLGSLRDYLPK---------HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLA 154 (283)
T ss_pred ecCCCCCCHHHHHHH---------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccc
Confidence 999999999999964 2489999999999999999999988 8999999999999999999999999999
Q ss_pred cccC
Q 035786 667 HAQG 670 (693)
Q Consensus 667 ~~~~ 670 (693)
+...
T Consensus 155 ~~~~ 158 (283)
T cd05080 155 KAVP 158 (283)
T ss_pred cccC
Confidence 8763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=214.40 Aligned_cols=167 Identities=17% Similarity=0.265 Sum_probs=129.1
Q ss_pred cCccccCCeeeEEEEEeC---CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEEEEccCCC
Q 035786 517 TNLIKKGHSGDLFKGTLA---GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLLVYKYMVC 592 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~---~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~lv~ey~~~ 592 (693)
...||+|+||.||+|+.. +++.||||.+..... ..++.+|++++++++|||||++++++... +...++||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence 468999999999999864 467899999865332 34578999999999999999999987643 345789999996
Q ss_pred CChhhhhhccCCCC-CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee----CCCCceEECCccccc
Q 035786 593 GDLASSLHRVTDLE-DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL----DDKFEVRLGSLSELH 667 (693)
Q Consensus 593 GsL~~~l~~~~~~~-~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl----d~~~~~ki~Dfgla~ 667 (693)
++|.+++....... ......+++.....++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 58888876432111 11223588999999999999999999988 89999999999999 466899999999999
Q ss_pred ccCCCCcc--eeeeeehhhhhhh
Q 035786 668 AQGDSHQN--VLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~--~~~~~~~~~~y~a 688 (693)
........ ......+|++|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~a 183 (317)
T cd07868 161 LFNSPLKPLADLDPVVVTFWYRA 183 (317)
T ss_pred ccCCCCccccccCCccccccccC
Confidence 87433221 1233556666665
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=212.52 Aligned_cols=153 Identities=22% Similarity=0.371 Sum_probs=128.6
Q ss_pred CCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||.||+|+.. ++..||+|++...... .+.|.+|++++++++|+||++++++|.. ....++
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 84 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGD-GDPLIM 84 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc-CCceEE
Confidence 3566788999999999999842 3567999998654433 4579999999999999999999999875 467899
Q ss_pred EEccCCCCChhhhhhccCCC--------CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 586 VYKYMVCGDLASSLHRVTDL--------EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~--------~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
||||+++|+|.++++..... .......++|.++.+++.+++.|++|||+. +|+||||||+||++++++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 99999999999999753210 001123589999999999999999999988 8999999999999999999
Q ss_pred eEECCccccccc
Q 035786 658 VRLGSLSELHAQ 669 (693)
Q Consensus 658 ~ki~Dfgla~~~ 669 (693)
+||+|||+++..
T Consensus 162 ~~l~dfg~a~~~ 173 (291)
T cd05094 162 VKIGDFGMSRDV 173 (291)
T ss_pred EEECCCCccccc
Confidence 999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=210.58 Aligned_cols=153 Identities=22% Similarity=0.372 Sum_probs=129.3
Q ss_pred CCCccCccccCCeeeEEEEEeCC------CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~------g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
+|...+.||+|+||.||+|...+ +..||+|.+..... ...+|.+|++++..++|+||+++++++.+ +...+
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~ 85 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVST-GQPTL 85 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC-CCCcE
Confidence 46677899999999999998642 36899999865432 24578999999999999999999999875 46789
Q ss_pred EEEccCCCCChhhhhhccCCCCC--CCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 585 LVYKYMVCGDLASSLHRVTDLED--DSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~--~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
+||||+++|+|.++++......+ .....++|.+.+.++.+++.|+.|||+. +|+||||||+||++++++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEECC
Confidence 99999999999999975432111 1123589999999999999999999987 999999999999999999999999
Q ss_pred ccccccc
Q 035786 663 LSELHAQ 669 (693)
Q Consensus 663 fgla~~~ 669 (693)
||+++.+
T Consensus 163 fg~~~~~ 169 (277)
T cd05032 163 FGMTRDI 169 (277)
T ss_pred cccchhh
Confidence 9999875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.1e-23 Score=220.34 Aligned_cols=162 Identities=20% Similarity=0.289 Sum_probs=130.2
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----C
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHE-----T 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-----~ 581 (693)
.++|...+.||+|+||.||++.. .+|+.||||++..... ..+++.+|++++.+++||||+++++++...+ .
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 45688889999999999999986 4589999999864322 2457889999999999999999999875432 2
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++||||+++ +|.+.++. .+++.+...++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~----------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~ 165 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIHM----------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 165 (359)
T ss_pred eeEEEEeCCCc-CHHHHHhc----------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEe
Confidence 46899999975 56666642 378888999999999999999998 99999999999999999999999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++....... .+...+|+.|+|
T Consensus 166 Dfg~a~~~~~~~~--~~~~~~t~~y~a 190 (359)
T cd07876 166 DFGLARTACTNFM--MTPYVVTRYYRA 190 (359)
T ss_pred cCCCccccccCcc--CCCCcccCCCCC
Confidence 9999987533221 223445555654
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.8e-23 Score=212.18 Aligned_cols=159 Identities=19% Similarity=0.284 Sum_probs=130.5
Q ss_pred cCccccCCeeeEEEEEe-CCCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 517 TNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
.+++|+|-||+||-|+. .+|+.||||.+++.. .+.++.++|+.+|.+++||-||.+.--| +..+..+.|||-+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~-ET~ervFVVMEKl~- 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF-ETPERVFVVMEKLH- 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-cCCceEEEEehhhc-
Confidence 47899999999999986 579999999997643 3356789999999999999999997544 55678999999985
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC--C-ceEECCccccccc
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK--F-EVRLGSLSELHAQ 669 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~--~-~~ki~Dfgla~~~ 669 (693)
||..+.+-...+ ..|....-.-+..||..||.|||.. .|+|+||||+||||.+. + ++|++|||+||++
T Consensus 647 GDMLEMILSsEk------gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI 717 (888)
T KOG4236|consen 647 GDMLEMILSSEK------GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARII 717 (888)
T ss_pred chHHHHHHHhhc------ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeec
Confidence 565555543322 2366666667889999999999998 99999999999999743 3 7999999999999
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
++..- ...++|||.|.|
T Consensus 718 gEksF--RrsVVGTPAYLa 734 (888)
T KOG4236|consen 718 GEKSF--RRSVVGTPAYLA 734 (888)
T ss_pred chhhh--hhhhcCCccccC
Confidence 77655 566899999987
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.4e-23 Score=219.89 Aligned_cols=163 Identities=20% Similarity=0.284 Sum_probs=130.9
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-----
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE----- 580 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----- 580 (693)
..++|...+.||+|+||.||++.. ..++.||||++...... .+.+.+|+.+++.++||||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 345688889999999999999985 45889999999753222 456889999999999999999999875322
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
...++||||+++ ++.+++.. .+++.++..++.|+++||+|||+. +|+||||||+|||+++++.+||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~----------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl 160 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM----------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKI 160 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh----------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEE
Confidence 246899999975 67666642 388999999999999999999998 9999999999999999999999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++..+.... .....+|+.|+|
T Consensus 161 ~Dfg~~~~~~~~~~--~~~~~~t~~y~a 186 (355)
T cd07874 161 LDFGLARTAGTSFM--MTPYVVTRYYRA 186 (355)
T ss_pred eeCcccccCCCccc--cCCccccCCccC
Confidence 99999987644322 122345555544
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-22 Score=209.54 Aligned_cols=154 Identities=23% Similarity=0.365 Sum_probs=129.8
Q ss_pred hCCCCccCccccCCeeeEEEEEeCC------CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCe
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETE 582 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~------g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 582 (693)
+++|...+.||+|+||.||+|...+ +..||+|........ ..+|.+|+.++++++|+||+++++++.+. ..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~ 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER-LP 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC-CC
Confidence 4567788899999999999999743 568999988643322 45799999999999999999999988764 57
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC---ceE
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF---EVR 659 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~---~~k 659 (693)
.++||||+++|+|.++++....... ....++|.++.+++.+|+.|++|||.. +++||||||+||+++.++ .+|
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPE-RPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceE
Confidence 8999999999999999986542211 223599999999999999999999988 899999999999998654 699
Q ss_pred ECCccccccc
Q 035786 660 LGSLSELHAQ 669 (693)
Q Consensus 660 i~Dfgla~~~ 669 (693)
++|||+++..
T Consensus 160 l~dfg~~~~~ 169 (277)
T cd05036 160 IADFGMARDI 169 (277)
T ss_pred eccCcccccc
Confidence 9999999876
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-22 Score=213.17 Aligned_cols=154 Identities=16% Similarity=0.300 Sum_probs=128.3
Q ss_pred CCCccCccccCCeeeEEEEEeC--------CCcEEEEEEecccc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA--------GGTTVVVKKVSLHS--FKKESYMMELDLFSRV-SHARLVPLLGQCLEHET 581 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~--------~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~ 581 (693)
+|...+.||+|+||.||+|+.. ++..||+|.+.... ...+++.+|++++..+ +||||++++++|.. +.
T Consensus 16 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~ 94 (304)
T cd05101 16 KLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DG 94 (304)
T ss_pred HeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec-CC
Confidence 3666789999999999999741 24579999986432 2246789999999999 89999999998875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCC--------CCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLED--------DSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD 653 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~--------~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld 653 (693)
..++||||+++|+|.++++....... .....++|.++..++.|+++||+|||+. +|+||||||+||+++
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili~ 171 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLVT 171 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEEc
Confidence 78999999999999999986432110 1124589999999999999999999988 999999999999999
Q ss_pred CCCceEECCcccccccC
Q 035786 654 DKFEVRLGSLSELHAQG 670 (693)
Q Consensus 654 ~~~~~ki~Dfgla~~~~ 670 (693)
+++.+||+|||+++...
T Consensus 172 ~~~~~kl~D~g~~~~~~ 188 (304)
T cd05101 172 ENNVMKIADFGLARDVN 188 (304)
T ss_pred CCCcEEECCCccceecc
Confidence 99999999999998763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-22 Score=211.94 Aligned_cols=146 Identities=22% Similarity=0.343 Sum_probs=129.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.+|...+.||+|+||.||+|.. .+++.||+|.+...... .+.+.+|+.+++.++|+||++++++|.. +...++||||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e~ 97 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEY 97 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEeecc
Confidence 4577788999999999999985 57999999999754433 4678899999999999999999999875 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.+++.+ ..+++.++..++.+++.||.|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 98 ~~~~~L~~~~~~---------~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~ 165 (297)
T cd06656 98 LAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 165 (297)
T ss_pred cCCCCHHHHHHh---------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEc
Confidence 999999999864 2478999999999999999999987 9999999999999999999999999998875
Q ss_pred C
Q 035786 670 G 670 (693)
Q Consensus 670 ~ 670 (693)
.
T Consensus 166 ~ 166 (297)
T cd06656 166 T 166 (297)
T ss_pred c
Confidence 3
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=217.92 Aligned_cols=162 Identities=21% Similarity=0.285 Sum_probs=131.4
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHE----- 580 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----- 580 (693)
..+.|...+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|++++.+++|||||++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 345677888999999999999985 4688999999865322 2456889999999999999999998764321
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
...++++||+ +++|.+++.. ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl 159 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC---------QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRI 159 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEE
Confidence 3468999998 7899887753 2489999999999999999999988 9999999999999999999999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++...... +..++|++|+|
T Consensus 160 ~Dfg~~~~~~~~~----~~~~~t~~y~a 183 (343)
T cd07878 160 LDFGLARQADDEM----TGYVATRWYRA 183 (343)
T ss_pred cCCccceecCCCc----CCccccccccC
Confidence 9999998864322 22345555554
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-22 Score=216.43 Aligned_cols=162 Identities=19% Similarity=0.249 Sum_probs=139.9
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~l 585 (693)
..|...+.||+|.||.||+++-+ +|+.+|+|.+.+.... .+...+|+++|.++. |||||.+.+++-+ ....++
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~-~~~~~l 113 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED-PDSVYL 113 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc-CCeEEE
Confidence 34566688999999999999975 4999999999764432 468899999999998 9999999998865 468999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC----CceEEC
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK----FEVRLG 661 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~----~~~ki~ 661 (693)
|||++.+|.|.+.+... .++......++.+++.++.|||.. +|+|||+||+|+|+... +.+|++
T Consensus 114 vmEL~~GGeLfd~i~~~---------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~ 181 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK---------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLI 181 (382)
T ss_pred EEEecCCchHHHHHHHc---------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEe
Confidence 99999999999999753 178888899999999999999997 99999999999999744 479999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++.... .......+||++|+|
T Consensus 182 DFGla~~~~~--~~~~~~~~Gtp~y~A 206 (382)
T KOG0032|consen 182 DFGLAKFIKP--GERLHTIVGTPEYVA 206 (382)
T ss_pred eCCCceEccC--CceEeeecCCccccC
Confidence 9999999866 334677999999998
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=219.20 Aligned_cols=160 Identities=21% Similarity=0.280 Sum_probs=130.2
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
...+|...+.||+|+||.||+|+.. +++.||+|..... .+..|+.++.+++|+|||++++++.+ +...++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVS-GAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEe-CCeeEEEEE
Confidence 3456889999999999999999975 4778999975322 24569999999999999999999876 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+. |+|.+++.... ..++|..+.+|+.||+.||+|||.. +||||||||+|||+++++.+||+|||+++.
T Consensus 138 ~~~-~~l~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 206 (357)
T PHA03209 138 HYS-SDLYTYLTKRS-------RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQF 206 (357)
T ss_pred ccC-CcHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccc
Confidence 995 68998886432 3589999999999999999999988 899999999999999999999999999986
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
...... .....||+.|+|
T Consensus 207 ~~~~~~--~~~~~gt~~y~a 224 (357)
T PHA03209 207 PVVAPA--FLGLAGTVETNA 224 (357)
T ss_pred cccCcc--cccccccccccC
Confidence 422111 122345555554
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=209.52 Aligned_cols=143 Identities=21% Similarity=0.359 Sum_probs=125.7
Q ss_pred ccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 516 ETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
..+.||+|+||.||+|... ++..+|+|.+..... ..+.|.+|++++.+++||||++++++|.. ++..++||||+++|
T Consensus 9 i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-~~~~~~v~e~~~~~ 87 (282)
T cd06643 9 IIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-ENNLWILIEFCAGG 87 (282)
T ss_pred HHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-CCEEEEEEEecCCC
Confidence 3467999999999999975 478899999865433 24678999999999999999999999876 46889999999999
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+|..++++.. ..++|..+..++.+++.||+|||+. +|+||||||+||+++.++++||+|||+++..
T Consensus 88 ~l~~~~~~~~-------~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 88 AVDAVMLELE-------RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred cHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccc
Confidence 9999886432 3589999999999999999999988 9999999999999999999999999998765
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-22 Score=211.87 Aligned_cols=144 Identities=22% Similarity=0.351 Sum_probs=128.0
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
.|...+.||+|+||.||+|.. .+++.||+|.+...... .+.+.+|+++++.++|+||++++++|.. +...++||||+
T Consensus 21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-~~~~~lv~e~~ 99 (296)
T cd06654 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEYL 99 (296)
T ss_pred ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-CCEEEEeeccc
Confidence 466778899999999999985 46889999998754433 5678999999999999999999998875 46899999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++|+|.++++. ..+++.++..++.|++.|++|||.. +|+||||||+||++++++.+||+|||+++..
T Consensus 100 ~~~~L~~~~~~---------~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~ 166 (296)
T cd06654 100 AGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (296)
T ss_pred CCCCHHHHHHh---------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhc
Confidence 99999999864 2378999999999999999999988 8999999999999999999999999998875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-22 Score=208.73 Aligned_cols=142 Identities=20% Similarity=0.329 Sum_probs=123.9
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|...++||+|+||.||+|.. .+++.||+|.+..... ..++|.+|++++.+++||||++++++|.. ++..++||||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 80 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-ENRISICTEF 80 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-CCEEEEEEec
Confidence 456678899999999999985 5688999999865422 24679999999999999999999999876 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|..+. .+++.....++.+++.||+|||+. +|+|+||||+||+++.++.+||+|||+++..
T Consensus 81 ~~~~~l~~~~------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~ 145 (279)
T cd06619 81 MDGGSLDVYR------------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQL 145 (279)
T ss_pred CCCCChHHhh------------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceec
Confidence 9999996542 267888899999999999999988 9999999999999999999999999999876
Q ss_pred C
Q 035786 670 G 670 (693)
Q Consensus 670 ~ 670 (693)
.
T Consensus 146 ~ 146 (279)
T cd06619 146 V 146 (279)
T ss_pred c
Confidence 3
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-22 Score=212.85 Aligned_cols=154 Identities=22% Similarity=0.440 Sum_probs=127.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCc--EEEEEEeccccc--CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGT--TVVVKKVSLHSF--KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~--~vavK~l~~~~~--~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~l 585 (693)
++|+..+.||+|+||.||+|... +|. .+|+|++..... ..++|.+|++++.++ +|+||+++++++.+ ++..++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~-~~~~~l 85 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYL 85 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC-CCCceE
Confidence 34677789999999999999964 454 468887764322 245789999999999 89999999998865 467899
Q ss_pred EEccCCCCChhhhhhccCCCCC--------CCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 586 VYKYMVCGDLASSLHRVTDLED--------DSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~--------~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
|+||+++|+|.++++....... .....+++.++..++.|++.|++|||+. +|+||||||+|||+++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCc
Confidence 9999999999999985432111 1123589999999999999999999988 9999999999999999999
Q ss_pred eEECCccccccc
Q 035786 658 VRLGSLSELHAQ 669 (693)
Q Consensus 658 ~ki~Dfgla~~~ 669 (693)
+||+|||+++..
T Consensus 163 ~kl~dfg~~~~~ 174 (303)
T cd05088 163 AKIADFGLSRGQ 174 (303)
T ss_pred EEeCccccCccc
Confidence 999999998754
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-22 Score=211.14 Aligned_cols=152 Identities=22% Similarity=0.340 Sum_probs=126.4
Q ss_pred CCccCccccCCeeeEEEEEeCC------CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~------g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
|...+.||+|+||.||+|+..+ +..||||++...... .+.|.+|++++.+++|||||++++++.+. ...++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~-~~~~~ 85 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE-QPLSM 85 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC-CceEE
Confidence 3445679999999999998632 578999998754332 45789999999999999999999998754 57899
Q ss_pred EEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 586 VYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
++||+++++|.+++....... ......+++..+.+++.|++.||+|||+. +|+||||||+||+++++++
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 999999999999986321100 11124589999999999999999999987 8999999999999999999
Q ss_pred eEECCccccccc
Q 035786 658 VRLGSLSELHAQ 669 (693)
Q Consensus 658 ~ki~Dfgla~~~ 669 (693)
+||+|||+++..
T Consensus 163 ~kl~Dfg~~~~~ 174 (283)
T cd05091 163 VKISDLGLFREV 174 (283)
T ss_pred eEeccccccccc
Confidence 999999998876
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-22 Score=207.78 Aligned_cols=151 Identities=20% Similarity=0.354 Sum_probs=129.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. .+++.||||++..... ..+.|.+|++++++++||||+++++++.+ .+..++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-DNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-CCeEEEE
Confidence 3577788999999999999996 4689999998754221 13578999999999999999999998875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
+||+++|+|.+++..... ....++..+...++.++++||+|||+. +|+||||||+||++++++.++++|||++
T Consensus 81 ~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~ 153 (267)
T cd08228 81 LELADAGDLSQMIKYFKK----QKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred EEecCCCcHHHHHHHhhh----ccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccc
Confidence 999999999998864221 113578899999999999999999988 9999999999999999999999999998
Q ss_pred cccC
Q 035786 667 HAQG 670 (693)
Q Consensus 667 ~~~~ 670 (693)
+...
T Consensus 154 ~~~~ 157 (267)
T cd08228 154 RFFS 157 (267)
T ss_pred eecc
Confidence 8763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-22 Score=211.48 Aligned_cols=154 Identities=23% Similarity=0.388 Sum_probs=129.4
Q ss_pred CCCCccCccccCCeeeEEEEEeCC-----------------CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccce
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG-----------------GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPL 572 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~-----------------g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l 572 (693)
.+|...+.||+|+||.||+|+..+ +..||+|++..... ..++|.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 456778899999999999998542 24689999875432 25679999999999999999999
Q ss_pred eEEEEcCCCeeEEEEccCCCCChhhhhhccCCCC---CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCC
Q 035786 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLE---DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASS 649 (693)
Q Consensus 573 ~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~---~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~N 649 (693)
+++|.. +...++|+||+++|+|.+++.+..... ......++|.....++.+++.||+|||+. +|+||||||+|
T Consensus 85 ~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 85 LGVCTV-DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEec-CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 998875 467899999999999999997643110 01123689999999999999999999988 89999999999
Q ss_pred eeeCCCCceEECCccccccc
Q 035786 650 ILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 650 ILld~~~~~ki~Dfgla~~~ 669 (693)
|++++++.+|++|||+++..
T Consensus 161 ili~~~~~~~l~dfg~~~~~ 180 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNL 180 (296)
T ss_pred eeecCCCceEEccccceeec
Confidence 99999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-22 Score=211.02 Aligned_cols=154 Identities=20% Similarity=0.382 Sum_probs=128.9
Q ss_pred CCCCccCccccCCeeeEEEEEeC-----------------CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccce
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-----------------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPL 572 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-----------------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l 572 (693)
++|+..+.||+|+||.||++... ++..||||++...... .++|.+|++++.+++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 35777889999999999998532 2457999998654322 4679999999999999999999
Q ss_pred eEEEEcCCCeeEEEEccCCCCChhhhhhccCCCC---CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCC
Q 035786 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLE---DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASS 649 (693)
Q Consensus 573 ~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~---~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~N 649 (693)
++++.. ++..++||||+++|+|.++++...... ......++|.+...++.+++.|++|||+. +|+||||||+|
T Consensus 85 ~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 85 LAVCIT-SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEec-CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 999875 467899999999999999997643211 11224589999999999999999999988 89999999999
Q ss_pred eeeCCCCceEECCccccccc
Q 035786 650 ILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 650 ILld~~~~~ki~Dfgla~~~ 669 (693)
|++++++.+|++|||+++.+
T Consensus 161 ili~~~~~~~l~dfg~~~~~ 180 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNL 180 (296)
T ss_pred EEEcCCCCEEeccCcccccc
Confidence 99999999999999999865
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=209.58 Aligned_cols=154 Identities=27% Similarity=0.416 Sum_probs=129.3
Q ss_pred CCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
++|.....||+|+||.||+|+.. +.+.||+|.+...... .++|.+|++++++++|+||++++++|.+ ....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCRE-AEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECC-CCcc
Confidence 35777888999999999999863 2467999988654433 4679999999999999999999998865 4578
Q ss_pred EEEEccCCCCChhhhhhccCCCC-CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLE-DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~-~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
++||||+++|+|.++++...... ......++|.++..++.+++.||+|||+. +|+||||||+||++++++.+|++|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcc
Confidence 99999999999999997543111 11123589999999999999999999988 899999999999999999999999
Q ss_pred ccccccc
Q 035786 663 LSELHAQ 669 (693)
Q Consensus 663 fgla~~~ 669 (693)
||+++..
T Consensus 161 ~~~~~~~ 167 (275)
T cd05046 161 LSLSKDV 167 (275)
T ss_pred ccccccc
Confidence 9998764
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-22 Score=208.93 Aligned_cols=146 Identities=23% Similarity=0.396 Sum_probs=127.3
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCc----EEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGT----TVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~----~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||.||+|+.. +|. .||+|.+...... .++|.+|++++++++|+||++++++|.. ...++
T Consensus 8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 85 (279)
T cd05057 8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS--SQVQL 85 (279)
T ss_pred HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CceEE
Confidence 3666789999999999999964 333 6899988655432 4679999999999999999999999975 57899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|+||+++|+|.++++... ..++|...+.++.|++.|++|||+. +|+||||||+||++++++.+|++|||+
T Consensus 86 v~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~ 155 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK-------DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGL 155 (279)
T ss_pred EEecCCCCcHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcc
Confidence 999999999999997533 2489999999999999999999987 999999999999999999999999999
Q ss_pred ccccC
Q 035786 666 LHAQG 670 (693)
Q Consensus 666 a~~~~ 670 (693)
++...
T Consensus 156 ~~~~~ 160 (279)
T cd05057 156 AKLLD 160 (279)
T ss_pred ccccc
Confidence 98763
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-22 Score=212.76 Aligned_cols=147 Identities=24% Similarity=0.391 Sum_probs=125.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCc----EEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGT----TVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~----~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
++|...+.||+|+||.||+|+.. +|. .||+|.+...... ..+|.+|+.++++++||||++++|+|.. ...+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~--~~~~ 84 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS--PTIQ 84 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC--CCce
Confidence 34677789999999999999863 444 5789988654322 3478999999999999999999999864 3567
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 85 ~v~e~~~~g~l~~~~~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg 154 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK-------DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFG 154 (303)
T ss_pred eeehhcCCCCHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccc
Confidence 9999999999999987532 2488999999999999999999988 99999999999999999999999999
Q ss_pred cccccC
Q 035786 665 ELHAQG 670 (693)
Q Consensus 665 la~~~~ 670 (693)
+++...
T Consensus 155 ~~~~~~ 160 (303)
T cd05110 155 LARLLE 160 (303)
T ss_pred cccccc
Confidence 998763
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-22 Score=206.35 Aligned_cols=146 Identities=24% Similarity=0.383 Sum_probs=128.1
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
++|...+.||+|+||.||+|.. .+++.||+|.+..... +.+.+.+|++++.+++||||+++++++.+ +...+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD-DETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc-CCeEE
Confidence 4578889999999999999986 4689999998864321 13468899999999999999999998875 46889
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+|+||+++|+|.+++... ..+++....+++.+++.|++|||+. +|+||||||+||++++++++||+|||
T Consensus 81 ~v~e~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg 149 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAY--------GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFG 149 (263)
T ss_pred EEEEECCCCcHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 999999999999998753 2478899999999999999999988 99999999999999999999999999
Q ss_pred ccccc
Q 035786 665 ELHAQ 669 (693)
Q Consensus 665 la~~~ 669 (693)
+++..
T Consensus 150 ~~~~~ 154 (263)
T cd06625 150 ASKRL 154 (263)
T ss_pred cceec
Confidence 99865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-22 Score=234.08 Aligned_cols=164 Identities=21% Similarity=0.271 Sum_probs=136.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|... +++.||||++...... .+.+.+|++++..++|+|||++++++.. ....++|
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS-ANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-CCEEEEE
Confidence 45777889999999999999975 6899999998653322 3578899999999999999999987765 4689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++.. ..+++....+|+.+|+.||+|||.. +||||||||+|||++.++.+||+|||++
T Consensus 83 mEy~~g~~L~~li~~~--------~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls 151 (669)
T cd05610 83 MEYLIGGDVKSLLHIY--------GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLS 151 (669)
T ss_pred EeCCCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCC
Confidence 9999999999999753 2478889999999999999999987 8999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ ....++|+.|+|
T Consensus 152 ~~~~~~~~~-~~~~~~t~~~~~ 172 (669)
T cd05610 152 KVTLNRELN-MMDILTTPSMAK 172 (669)
T ss_pred ccccCCccc-ccccccCccccC
Confidence 986433222 223456665554
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-22 Score=210.12 Aligned_cols=155 Identities=25% Similarity=0.364 Sum_probs=130.3
Q ss_pred hCCCCccCccccCCeeeEEEEEeC------CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCe
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETE 582 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 582 (693)
.++|...+.||+|+||.||+|... ++..||+|.+..... ..++|.+|++++++++||||++++++|.+ +..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~-~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAV-GKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC-CCc
Confidence 345778889999999999999853 467899999865332 24579999999999999999999998875 457
Q ss_pred eEEEEccCCCCChhhhhhccCCCC--------------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLE--------------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQAS 648 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~--------------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~ 648 (693)
.++||||+++|+|.++++...... ......++|.+++.++.+++.||+|||.. +++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHh
Confidence 899999999999999997532110 01123589999999999999999999988 8999999999
Q ss_pred CeeeCCCCceEECCccccccc
Q 035786 649 SILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 649 NILld~~~~~ki~Dfgla~~~ 669 (693)
||++++++.+||+|||+++.+
T Consensus 160 nil~~~~~~~~l~dfg~~~~~ 180 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNI 180 (288)
T ss_pred heEecCCCceEECccccceec
Confidence 999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-22 Score=205.24 Aligned_cols=146 Identities=23% Similarity=0.411 Sum_probs=129.8
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|+..+.||+|+||.||+|...++..+|||.+.......++|.+|++++.+++|||++++++++.. ....++||||+++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~~~ 83 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTE-RSPICLVFEFMEH 83 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEcc-CCceEEEEEcCCC
Confidence 355677899999999999998778899999987665556789999999999999999999998865 4578999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|+|.++++... ..++|.....++.+++.|++|||.. +++||||||+||+++.+..+||+|||+++..
T Consensus 84 ~~L~~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 150 (256)
T cd05112 84 GCLSDYLRAQR-------GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFV 150 (256)
T ss_pred CcHHHHHHhCc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeec
Confidence 99999987532 2478999999999999999999988 8999999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-22 Score=212.76 Aligned_cols=167 Identities=17% Similarity=0.268 Sum_probs=128.3
Q ss_pred cCccccCCeeeEEEEEeCC---CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEEEEccCCC
Q 035786 517 TNLIKKGHSGDLFKGTLAG---GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLLVYKYMVC 592 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~---g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~lv~ey~~~ 592 (693)
...||+|+||.||+|+..+ +..||+|++..... ..++.+|++++++++|||||++++++... +...++|+||+++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 3579999999999999653 57899999865432 34688999999999999999999988643 3467899999875
Q ss_pred CChhhhhhccCCC-CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee----CCCCceEECCccccc
Q 035786 593 GDLASSLHRVTDL-EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL----DDKFEVRLGSLSELH 667 (693)
Q Consensus 593 GsL~~~l~~~~~~-~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl----d~~~~~ki~Dfgla~ 667 (693)
+|.+++...... .......+++.....++.|++.||.|||+. +|+||||||+||++ ++++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 788887532211 111224589999999999999999999988 89999999999999 567899999999999
Q ss_pred ccCCCCcc--eeeeeehhhhhhh
Q 035786 668 AQGDSHQN--VLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~--~~~~~~~~~~y~a 688 (693)
........ ......+|+.|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~a 183 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRA 183 (317)
T ss_pred ccCCCcccccccCcceecccccC
Confidence 87433221 1223445556654
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-22 Score=204.93 Aligned_cols=148 Identities=20% Similarity=0.313 Sum_probs=129.3
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|+..++||+|+||.||.++. .+++.||+|++.... ...++|.+|++++++++|+||+++++++.+ ++..++||||
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~~~e~ 80 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD-DNTLLIEMEY 80 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec-CCeEEEEEEe
Confidence 66778999999999999985 468899999986533 224678999999999999999999999876 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.+++..... ..+++.++..++.++++|++|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 81 ~~~~~L~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~ 151 (256)
T cd08221 81 ANGGTLYDKIVRQKG------QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKIL 151 (256)
T ss_pred cCCCcHHHHHHhccc------cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEc
Confidence 999999999975321 3589999999999999999999987 8999999999999999999999999999876
Q ss_pred CC
Q 035786 670 GD 671 (693)
Q Consensus 670 ~~ 671 (693)
..
T Consensus 152 ~~ 153 (256)
T cd08221 152 GS 153 (256)
T ss_pred cc
Confidence 33
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-22 Score=207.42 Aligned_cols=147 Identities=22% Similarity=0.419 Sum_probs=128.2
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CC---cEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GG---TTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g---~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++|+..+.||+|+||.||+|+.. ++ ..||||++..... ..++|.+|++++.+++|+||+++.+++.+ .+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 83 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK-FKPAMI 83 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc-CCCcEE
Confidence 35777899999999999999974 33 3799999865432 24679999999999999999999998875 467899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..++|.++..++.+++.|++|||.. +|+||||||+||++++++.+|++|||+
T Consensus 84 v~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~ 153 (268)
T cd05063 84 ITEYMENGALDKYLRDHD-------GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGL 153 (268)
T ss_pred EEEcCCCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCcc
Confidence 999999999999997532 2489999999999999999999988 899999999999999999999999999
Q ss_pred cccc
Q 035786 666 LHAQ 669 (693)
Q Consensus 666 a~~~ 669 (693)
++..
T Consensus 154 ~~~~ 157 (268)
T cd05063 154 SRVL 157 (268)
T ss_pred ceec
Confidence 8876
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.7e-23 Score=219.60 Aligned_cols=160 Identities=19% Similarity=0.238 Sum_probs=134.0
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+...+.+|+|+-|.|-.|+. .+|+.+|||.+.... .+.....+||-+|+-+.|||+++++.++.. ..+.|||.|
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~-~~~lylvlE 92 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN-KQHLYLVLE 92 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc-CceEEEEEE
Confidence 34456799999999999985 679999999996542 224568899999999999999999997764 568999999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
||++|.|++++.++. ++...+-.++..||..|+.|.|+. +|+|||+||+|+|||+...+||+|||+|.+
T Consensus 93 yv~gGELFdylv~kG--------~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsL 161 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKG--------PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASL 161 (786)
T ss_pred ecCCchhHHHHHhhC--------CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeec
Confidence 999999999998654 377888889999999999999998 999999999999999999999999999998
Q ss_pred cCCCCcceeeeeehhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQ 687 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~ 687 (693)
.....- ...-||.|-|.
T Consensus 162 e~~gkl--LeTSCGSPHYA 178 (786)
T KOG0588|consen 162 EVPGKL--LETSCGSPHYA 178 (786)
T ss_pred ccCCcc--ccccCCCcccC
Confidence 622211 23356776664
|
|
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-22 Score=205.15 Aligned_cols=144 Identities=26% Similarity=0.366 Sum_probs=127.4
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
|...+.||+|+||.||+|... +++.||+|.+..... ..+.|.+|++++++++|+||+++.+++.+ +...++|
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv 80 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE-EDNLYIF 80 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec-CCeEEEE
Confidence 556788999999999999975 789999998864331 23578999999999999999999998875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++++|.++++.. ..+++..+..++.+++.|++|||.. +|+|+||||+||++++++.+||+|||++
T Consensus 81 ~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~ 149 (258)
T cd06632 81 LELVPGGSLAKLLKKY--------GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMA 149 (258)
T ss_pred EEecCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccc
Confidence 9999999999999753 2488999999999999999999988 8999999999999999999999999998
Q ss_pred ccc
Q 035786 667 HAQ 669 (693)
Q Consensus 667 ~~~ 669 (693)
+..
T Consensus 150 ~~~ 152 (258)
T cd06632 150 KQV 152 (258)
T ss_pred eec
Confidence 875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-22 Score=205.91 Aligned_cols=147 Identities=24% Similarity=0.332 Sum_probs=125.7
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc------CHHHHHHHHHHHhcCCCCCccceeEEEEcCC-Cee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF------KKESYMMELDLFSRVSHARLVPLLGQCLEHE-TEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~ 583 (693)
++|...++||+|+||.||+|.. .+|..||||.+..... ..+.+.+|++++.+++||||+++++++.+.. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 3577788999999999999986 4589999998853211 1357889999999999999999999875432 356
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++||||+++|+|.+++... ..+++....+++.+++.||+|||+. +|+|+||||+||+++.++.+||+||
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Df 150 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--------GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDF 150 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcC
Confidence 7999999999999998643 2378888999999999999999988 8999999999999999999999999
Q ss_pred cccccc
Q 035786 664 SELHAQ 669 (693)
Q Consensus 664 gla~~~ 669 (693)
|+++..
T Consensus 151 g~~~~~ 156 (265)
T cd06652 151 GASKRL 156 (265)
T ss_pred cccccc
Confidence 998864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-22 Score=205.04 Aligned_cols=150 Identities=23% Similarity=0.368 Sum_probs=130.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|+..+.||+|+||.||+|... +|+.||+|.++... ...+.+.+|++++.+++|+||+++++++.+ ++..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-NNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec-CCeEEEE
Confidence 46778889999999999999976 78999999886322 225679999999999999999999998876 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++..... ....+++.++..++.++++|++|||+. +|+||||||+||++++++.++++|||++
T Consensus 81 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~ 153 (267)
T cd08224 81 LELADAGDLSRMIKHFKK----QKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLG 153 (267)
T ss_pred EecCCCCCHHHHHHHhcc----cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEecccee
Confidence 999999999999864321 124589999999999999999999988 9999999999999999999999999998
Q ss_pred ccc
Q 035786 667 HAQ 669 (693)
Q Consensus 667 ~~~ 669 (693)
+..
T Consensus 154 ~~~ 156 (267)
T cd08224 154 RFF 156 (267)
T ss_pred eec
Confidence 865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-22 Score=209.25 Aligned_cols=147 Identities=26% Similarity=0.380 Sum_probs=122.0
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcC---CCCCccceeEEEEcC----CCe
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRV---SHARLVPLLGQCLEH----ETE 582 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l---~H~niv~l~g~~~~~----~~~ 582 (693)
|...+.||+|+||.||+|+.. +|+.||+|.+...... ...+.+|++++.++ +||||+++++++.+. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 566788999999999999864 6899999998653222 34567788777665 799999999987542 234
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||++ |+|.++++.... ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 82 ~~lv~e~~~-~~l~~~~~~~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~d 151 (288)
T cd07863 82 VTLVFEHVD-QDLRTYLDKVPP------PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLAD 151 (288)
T ss_pred EEEEEcccc-cCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECc
Confidence 789999998 589998875321 3489999999999999999999998 899999999999999999999999
Q ss_pred cccccccC
Q 035786 663 LSELHAQG 670 (693)
Q Consensus 663 fgla~~~~ 670 (693)
||+++...
T Consensus 152 fg~~~~~~ 159 (288)
T cd07863 152 FGLARIYS 159 (288)
T ss_pred cCcccccc
Confidence 99998764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-22 Score=207.51 Aligned_cols=145 Identities=24% Similarity=0.370 Sum_probs=125.6
Q ss_pred CCCccCccccCCeeeEEEEEeCC----CcEEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
+|...+.||+|+||.||+|...+ ...||||...... ...+.|.+|++++++++||||++++++|.+ ...++|
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~lv 84 (270)
T cd05056 7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE--NPVWIV 84 (270)
T ss_pred hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC--CCcEEE
Confidence 35667899999999999998643 2469999886543 235679999999999999999999998863 567899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... ..++|.++..++.+++.|++|||+. +++||||||+||+++.++.+|++|||++
T Consensus 85 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~ 154 (270)
T cd05056 85 MELAPLGELRSYLQVNK-------YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLS 154 (270)
T ss_pred EEcCCCCcHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCcee
Confidence 99999999999997532 2489999999999999999999987 8999999999999999999999999999
Q ss_pred ccc
Q 035786 667 HAQ 669 (693)
Q Consensus 667 ~~~ 669 (693)
+..
T Consensus 155 ~~~ 157 (270)
T cd05056 155 RYL 157 (270)
T ss_pred eec
Confidence 875
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-22 Score=217.95 Aligned_cols=147 Identities=19% Similarity=0.254 Sum_probs=124.6
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----C
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHE-----T 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-----~ 581 (693)
.++|...+.||+|+||.||+|.. ..++.||||++..... ..+.+.+|+.+++.++||||+++++++...+ .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 45688889999999999999985 4588999999965322 2457889999999999999999999775321 2
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++||||+++ +|.+++.. .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~----------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~ 168 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQM----------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 168 (364)
T ss_pred eEEEEEeCCCC-CHHHHHHh----------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEE
Confidence 46899999975 67777642 378999999999999999999988 99999999999999999999999
Q ss_pred CcccccccCC
Q 035786 662 SLSELHAQGD 671 (693)
Q Consensus 662 Dfgla~~~~~ 671 (693)
|||+++..+.
T Consensus 169 DfG~a~~~~~ 178 (364)
T cd07875 169 DFGLARTAGT 178 (364)
T ss_pred eCCCccccCC
Confidence 9999987644
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=207.50 Aligned_cols=151 Identities=21% Similarity=0.371 Sum_probs=129.9
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+|.. .+|+.||||++..... ..++|.+|++++..++|+||+++++++.+ ++..++||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~v~ 81 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIVL 81 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe-CCeEEEEE
Confidence 466678899999999999995 5789999998864321 24579999999999999999999998876 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++..... ....++|.+...++.+++.|++|||+. +|+|+||||+||+++.++.++++|||+++
T Consensus 82 e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 154 (267)
T cd08229 82 ELADAGDLSRMIKHFKK----QKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EecCCCCHHHHHHHhhc----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhh
Confidence 99999999999874221 124589999999999999999999988 99999999999999999999999999988
Q ss_pred ccCC
Q 035786 668 AQGD 671 (693)
Q Consensus 668 ~~~~ 671 (693)
....
T Consensus 155 ~~~~ 158 (267)
T cd08229 155 FFSS 158 (267)
T ss_pred cccc
Confidence 7643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-22 Score=209.70 Aligned_cols=146 Identities=21% Similarity=0.339 Sum_probs=127.9
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK------KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
|+..+.||+|+||.||+|... +|+.||||++...... .+.+..|++++.+++|+||+++++++.+ ++..++|
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv 80 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-KSNINLV 80 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-CCEEEEE
Confidence 566778999999999999964 6899999999754322 3457789999999999999999999876 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+ +|+|.++++... ..++|..+.+++.|+++||+|||.. +|+||||||+||+++.++++||+|||++
T Consensus 81 ~e~~-~~~L~~~i~~~~-------~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~ 149 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-------IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLA 149 (298)
T ss_pred Eccc-CCCHHHHHhccC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceee
Confidence 9999 999999997532 2489999999999999999999998 8999999999999999999999999999
Q ss_pred cccCC
Q 035786 667 HAQGD 671 (693)
Q Consensus 667 ~~~~~ 671 (693)
+....
T Consensus 150 ~~~~~ 154 (298)
T cd07841 150 RSFGS 154 (298)
T ss_pred eeccC
Confidence 87643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=207.65 Aligned_cols=146 Identities=22% Similarity=0.332 Sum_probs=127.5
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
+|...+.||+|+||.||+|+. .+++.||+|.++..... .+.+.+|+.++..++||||+++++++.. ++..++|+||+
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~-~~~~~lv~e~~ 88 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR-RDKLWICMEFC 88 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe-CCEEEEEEecc
Confidence 355567899999999999986 46889999998654332 4568899999999999999999998875 46889999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.++++.. ..+++.+...++.+++.|+.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~~~~L~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06645 89 GGGSLQDIYHVT--------GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQIT 157 (267)
T ss_pred CCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence 999999998643 2488999999999999999999998 89999999999999999999999999987653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=210.64 Aligned_cols=155 Identities=19% Similarity=0.327 Sum_probs=129.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 582 (693)
++|+..+.||+|+||.||+|... +...||+|.+...... ..++.+|++++.++ +|+||++++++|.+ +..
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~ 90 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-EGP 90 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC-CCC
Confidence 45777789999999999999863 2368999998753322 35688999999999 89999999999875 467
Q ss_pred eEEEEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD 654 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~ 654 (693)
.++||||+++|+|.++++...... ......++|..+++++.|++.|++|||+. +|+||||||+||++++
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcC
Confidence 899999999999999997532100 01234699999999999999999999987 9999999999999999
Q ss_pred CCceEECCcccccccC
Q 035786 655 KFEVRLGSLSELHAQG 670 (693)
Q Consensus 655 ~~~~ki~Dfgla~~~~ 670 (693)
++.+|++|||+++.+.
T Consensus 168 ~~~~kL~Dfg~~~~~~ 183 (293)
T cd05053 168 DHVMKIADFGLARDIH 183 (293)
T ss_pred CCeEEeCccccccccc
Confidence 9999999999998763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-22 Score=209.92 Aligned_cols=145 Identities=21% Similarity=0.373 Sum_probs=126.0
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.|...+.||+|+||.||+|+.. +++.||+|.+..... ....+.+|++++++++||||+++++++.+ ++..++||||
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-~~~~~lv~e~ 85 (301)
T cd07873 7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-EKSLTLVFEY 85 (301)
T ss_pred ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEec-CCeEEEEEec
Confidence 4677788999999999999864 588999999864332 24568889999999999999999998875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++ |+|.+++.... ..+++.....++.++++||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 86 ~~-~~l~~~l~~~~-------~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 154 (301)
T cd07873 86 LD-KDLKQYLDDCG-------NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAK 154 (301)
T ss_pred cc-cCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhcc
Confidence 98 69999887532 3478999999999999999999988 9999999999999999999999999998865
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-22 Score=209.60 Aligned_cols=154 Identities=19% Similarity=0.414 Sum_probs=127.2
Q ss_pred CCCCccCccccCCeeeEEEEEeCC-Cc--EEEEEEeccccc--CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG-GT--TVVVKKVSLHSF--KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~-g~--~vavK~l~~~~~--~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~l 585 (693)
++|+..++||+|+||.||+|...+ +. .+|+|.++.... ..+.|.+|++++.++ +||||+++++++.+ ....++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN-RGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc-CCcceE
Confidence 356777899999999999998753 43 478888864322 246799999999999 79999999998865 457899
Q ss_pred EEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 586 VYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
|+||+++|+|.++++...... ......+++.+...|+.|++.|++|||+. +|+||||||+|||+++++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCe
Confidence 999999999999997532111 01123589999999999999999999987 9999999999999999999
Q ss_pred eEECCccccccc
Q 035786 658 VRLGSLSELHAQ 669 (693)
Q Consensus 658 ~ki~Dfgla~~~ 669 (693)
+||+|||+++..
T Consensus 158 ~kl~dfg~~~~~ 169 (297)
T cd05089 158 SKIADFGLSRGE 169 (297)
T ss_pred EEECCcCCCccc
Confidence 999999998754
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=209.54 Aligned_cols=159 Identities=19% Similarity=0.352 Sum_probs=135.1
Q ss_pred cCHHHHHHHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcC
Q 035786 502 FTYEQLLRATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEH 579 (693)
Q Consensus 502 ~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~ 579 (693)
.++.++..+.+.|+..+.||+|+||.||+|.. .+++.||+|.+........++..|+.++.++ +|+||+++++++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 34455555667788888999999999999997 4688999999876554556788999999999 799999999988632
Q ss_pred -----CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC
Q 035786 580 -----ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD 654 (693)
Q Consensus 580 -----~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~ 654 (693)
....++||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||++++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~ 156 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKG------NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTE 156 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECC
Confidence 3467899999999999999875322 3478888999999999999999988 8999999999999999
Q ss_pred CCceEECCccccccc
Q 035786 655 KFEVRLGSLSELHAQ 669 (693)
Q Consensus 655 ~~~~ki~Dfgla~~~ 669 (693)
++.++|+|||+++..
T Consensus 157 ~~~~~l~dfg~~~~~ 171 (282)
T cd06636 157 NAEVKLVDFGVSAQL 171 (282)
T ss_pred CCCEEEeeCcchhhh
Confidence 999999999998865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-22 Score=203.92 Aligned_cols=148 Identities=20% Similarity=0.310 Sum_probs=127.7
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|...+.||+|+||.||+++.. +++.||||++..... ..+.+.+|++++++++|+|++++.+.+...+...++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 566788999999999999964 578999999865332 2457889999999999999999998765444467899999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.+++..... ..+++.++..++.+++.|++|||+. +|+||||||+||++++++.++|+|||+++..
T Consensus 82 ~~~~~l~~~l~~~~~------~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~ 152 (257)
T cd08223 82 CEGGDLYHKLKEQKG------KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVL 152 (257)
T ss_pred cCCCcHHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEe
Confidence 999999999975321 3589999999999999999999988 8999999999999999999999999999876
Q ss_pred C
Q 035786 670 G 670 (693)
Q Consensus 670 ~ 670 (693)
.
T Consensus 153 ~ 153 (257)
T cd08223 153 E 153 (257)
T ss_pred c
Confidence 3
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.7e-22 Score=204.92 Aligned_cols=146 Identities=25% Similarity=0.388 Sum_probs=126.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc------CHHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF------KKESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~ 584 (693)
+|...++||+|+||.||+|... ++..||+|++..... ..+.+.+|++++++++||||+++++++.+. +...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 5778899999999999999864 589999998864321 134688999999999999999999987643 34678
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+++||+++++|.++++.. ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 83 l~~e~~~~~~L~~~l~~~--------~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg 151 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAY--------GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFG 151 (266)
T ss_pred EEEeCCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCC
Confidence 999999999999999753 2388999999999999999999987 89999999999999999999999999
Q ss_pred ccccc
Q 035786 665 ELHAQ 669 (693)
Q Consensus 665 la~~~ 669 (693)
+++..
T Consensus 152 ~~~~~ 156 (266)
T cd06651 152 ASKRL 156 (266)
T ss_pred Ccccc
Confidence 98865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-22 Score=207.04 Aligned_cols=146 Identities=20% Similarity=0.262 Sum_probs=127.2
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+|+....||+|+||.||+|+.. +|+.||+|++..... ..+.|.+|++++.+++|+||+++++++.. +...++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~v~e 80 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR-KRKLHLVFE 80 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee-CCEEEEEEe
Confidence 4667788999999999999975 589999998864321 24568899999999999999999998875 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|++++.|..++... ..++|.++..++.+++.||+|||+. +|+||||||+||+++.++++||+|||+++.
T Consensus 81 ~~~~~~l~~~~~~~--------~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 149 (286)
T cd07847 81 YCDHTVLNELEKNP--------RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARI 149 (286)
T ss_pred ccCccHHHHHHhCC--------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccccee
Confidence 99999998876532 2489999999999999999999987 999999999999999999999999999987
Q ss_pred cC
Q 035786 669 QG 670 (693)
Q Consensus 669 ~~ 670 (693)
..
T Consensus 150 ~~ 151 (286)
T cd07847 150 LT 151 (286)
T ss_pred cC
Confidence 63
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-22 Score=204.86 Aligned_cols=144 Identities=24% Similarity=0.432 Sum_probs=126.9
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC-------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK-------KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~-------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
|...+.||+|+||.||+|...+|+.||||.+...... .+.+.+|++++++++|+||+++.++|.+ +...++|
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv 80 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD-DNTISIF 80 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec-CCeEEEE
Confidence 5567889999999999999888999999988643211 2468899999999999999999999876 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.+. ..+++.....++.+++.|++|||.. +|+|+||||+||++++++.+|++|||++
T Consensus 81 ~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 149 (265)
T cd06631 81 MEFVPGGSISSILNRF--------GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCA 149 (265)
T ss_pred EecCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhh
Confidence 9999999999999653 2378999999999999999999987 8999999999999999999999999998
Q ss_pred ccc
Q 035786 667 HAQ 669 (693)
Q Consensus 667 ~~~ 669 (693)
+..
T Consensus 150 ~~~ 152 (265)
T cd06631 150 RRL 152 (265)
T ss_pred Hhh
Confidence 864
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4e-22 Score=207.17 Aligned_cols=150 Identities=22% Similarity=0.290 Sum_probs=124.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHH-HhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDL-FSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~-l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+|+..+.||+|+||.||+|+.. +|+.||+|+++.... ...++..|++. ++..+|||||++++++.. ++..++|||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-~~~~~lv~e 80 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR-EGDVWICME 80 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec-CCcEEEEhh
Confidence 5777789999999999999974 699999999875432 23456667765 566789999999999875 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
||+ |+|.++++..... ...+++.....++.|++.||+|||+++ +++||||||+||++++++.+||+|||+++.
T Consensus 81 ~~~-~~l~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~ 153 (283)
T cd06617 81 VMD-TSLDKFYKKVYDK----GLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGY 153 (283)
T ss_pred hhc-ccHHHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 997 7898888653211 145899999999999999999999753 799999999999999999999999999987
Q ss_pred cC
Q 035786 669 QG 670 (693)
Q Consensus 669 ~~ 670 (693)
..
T Consensus 154 ~~ 155 (283)
T cd06617 154 LV 155 (283)
T ss_pred cc
Confidence 53
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-22 Score=232.71 Aligned_cols=172 Identities=16% Similarity=0.291 Sum_probs=135.4
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLL 585 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~l 585 (693)
.++|...+.||+|+||.||+|+.. ++..||+|.+...... .+.|..|++++.+++|||||++++++.... ...++
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 356788899999999999999964 5788999998754322 457899999999999999999999886432 45789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCC----CCeEecCCCCCCeeeCCC------
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECN----PPLVHRDVQASSILLDDK------ 655 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~----p~iiHrDlk~~NILld~~------ 655 (693)
||||+++|+|.++|..... ....+++.....|+.||+.||+|||.... .+||||||||+||||+.+
T Consensus 92 VMEY~~gGSL~~lL~k~~~----~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYK----MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 9999999999999975321 11358999999999999999999998532 359999999999999643
Q ss_pred -----------CceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 656 -----------FEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 656 -----------~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
..+||+|||+++.+..... ....+||+.|+|
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~--~~s~vGTp~YmA 209 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIESM--AHSCVGTPYYWS 209 (1021)
T ss_pred ccccccccCCCCceEEccCCcccccccccc--ccccCCCccccC
Confidence 3489999999988643222 122456666654
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-22 Score=208.60 Aligned_cols=147 Identities=21% Similarity=0.269 Sum_probs=129.1
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||++... +++.||||.+.... ...+.+.+|++++++++||||+++++++.+ +...++||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~ 80 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-DSNLYLVM 80 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc-CCeEEEEE
Confidence 4667789999999999999964 68999999986432 224578899999999999999999998875 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++.. ..+++..+..++.+++.||.|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 81 e~~~~~~L~~~~~~~--------~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~ 149 (290)
T cd05580 81 EYVPGGELFSHLRKS--------GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAK 149 (290)
T ss_pred ecCCCCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCcc
Confidence 999999999999753 2488999999999999999999987 99999999999999999999999999998
Q ss_pred ccCC
Q 035786 668 AQGD 671 (693)
Q Consensus 668 ~~~~ 671 (693)
....
T Consensus 150 ~~~~ 153 (290)
T cd05580 150 RVKG 153 (290)
T ss_pred ccCC
Confidence 8643
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.5e-22 Score=206.81 Aligned_cols=153 Identities=25% Similarity=0.357 Sum_probs=128.1
Q ss_pred CCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++.....||+|+||.||++... ++..||+|.+...... .+.|.+|++++++++|+||+++++++.+ ....++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 84 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTE-GRPLLM 84 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEec-CCceEE
Confidence 3556788999999999999742 3568999988654332 4679999999999999999999998875 457899
Q ss_pred EEccCCCCChhhhhhccCCC-------CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 586 VYKYMVCGDLASSLHRVTDL-------EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~-------~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
|+||+++|+|.++++..... .......++|.+++.++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 99999999999999754310 011123589999999999999999999987 99999999999999999999
Q ss_pred EECCccccccc
Q 035786 659 RLGSLSELHAQ 669 (693)
Q Consensus 659 ki~Dfgla~~~ 669 (693)
||+|||+++..
T Consensus 162 kL~dfg~~~~~ 172 (280)
T cd05092 162 KIGDFGMSRDI 172 (280)
T ss_pred EECCCCceeEc
Confidence 99999999865
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-22 Score=225.27 Aligned_cols=167 Identities=19% Similarity=0.204 Sum_probs=130.7
Q ss_pred HHHHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCC------CccceeEEEEcC
Q 035786 507 LLRATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHA------RLVPLLGQCLEH 579 (693)
Q Consensus 507 l~~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~------niv~l~g~~~~~ 579 (693)
+...+++|...++||+|+||+||+|.. .+++.||||++.......+++..|++++.+++|. +++++++|+...
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 334567788899999999999999986 4588999999965433345567788888777655 488888888654
Q ss_pred CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC---
Q 035786 580 ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF--- 656 (693)
Q Consensus 580 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~--- 656 (693)
....++||||+ +|+|.+++.+. ..+++.....|+.||+.||+|||+++ +||||||||+|||++.++
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~~--------~~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMKH--------GPFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMETSDTVV 272 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEecCCccc
Confidence 45688999988 67899888653 24899999999999999999999632 899999999999998765
Q ss_pred -------------ceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 657 -------------EVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 657 -------------~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+||+|||.+...... .+..+||++|||
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~~~----~~~~~gt~~Y~A 313 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDERHS----RTAIVSTRHYRS 313 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCccc----cccccCCccccC
Confidence 4999999987654222 233566777765
|
|
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.4e-22 Score=206.38 Aligned_cols=146 Identities=23% Similarity=0.376 Sum_probs=126.3
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|...+.||+|+||.||+|+.. +|+.||||++..... ..+.+.+|++++.+++||||+++++++.+ +...++|+||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~ 80 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ-ESRLYLIFEF 80 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee-CCeEEEEEec
Confidence 566788999999999999974 689999999864322 24678899999999999999999999875 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++ |+|.++++.... ...+++.+...++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 81 ~~-~~l~~~~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 151 (285)
T cd07861 81 LS-MDLKKYLDSLPK-----GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAF 151 (285)
T ss_pred CC-CCHHHHHhcCCC-----CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeec
Confidence 98 789988864321 13589999999999999999999988 9999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-22 Score=206.50 Aligned_cols=160 Identities=26% Similarity=0.407 Sum_probs=131.6
Q ss_pred ccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCH---HHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 516 ETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKK---ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~---~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
..+.||+|+||.||+++.. +++.||+|.+....... +...+|++++.+++||||+++++++.+ +...++||||++
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~~v~~~~~ 81 (260)
T PF00069_consen 3 LVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-DNYLYIVMEYCP 81 (260)
T ss_dssp EEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-SSEEEEEEEEET
T ss_pred EeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-cccccccccccc
Confidence 4568999999999999975 57799999997655432 234569999999999999999999876 468899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++... ..+++..+..++.++++||+|||+. +|+||||||+||+++++++++|+|||.+.....
T Consensus 82 ~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~ 150 (260)
T PF00069_consen 82 GGSLQDYLQKN--------KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSE 150 (260)
T ss_dssp TEBHHHHHHHH--------SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTS
T ss_pred ccccccccccc--------ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 99999999732 3489999999999999999999998 999999999999999999999999999886411
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
... ......++++|+|
T Consensus 151 ~~~-~~~~~~~~~~y~a 166 (260)
T PF00069_consen 151 NNE-NFNPFVGTPEYMA 166 (260)
T ss_dssp TTS-EBSSSSSSGGGSC
T ss_pred ccc-ccccccccccccc
Confidence 111 1233445555544
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-22 Score=219.07 Aligned_cols=160 Identities=21% Similarity=0.264 Sum_probs=130.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC---CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA---GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~---~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
..|...+.||+|+||.||++... .+..||||.+... +.+.+|++++++++|||||++++++.. +...++|||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv~e 166 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRW-KSTVCMVMP 166 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEee-CCEEEEEeh
Confidence 45888899999999999999753 3578999988643 235689999999999999999998764 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+. |+|.+++... ..++|.++..|+.|++.||+|||.. +||||||||+|||+++++.+||+|||+++.
T Consensus 167 ~~~-~~l~~~l~~~--------~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~ 234 (392)
T PHA03207 167 KYK-CDLFTYVDRS--------GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACK 234 (392)
T ss_pred hcC-CCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccc
Confidence 996 6898888432 3489999999999999999999988 899999999999999999999999999987
Q ss_pred cCCCCcc-eeeeeehhhhhhh
Q 035786 669 QGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~-~~~~~~~~~~y~a 688 (693)
....... ......||+.|+|
T Consensus 235 ~~~~~~~~~~~~~~gt~~y~a 255 (392)
T PHA03207 235 LDAHPDTPQCYGWSGTLETNS 255 (392)
T ss_pred cCcccccccccccccccCccC
Confidence 6433221 1122445555544
|
|
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.5e-22 Score=204.40 Aligned_cols=148 Identities=23% Similarity=0.460 Sum_probs=123.0
Q ss_pred CccccCCeeeEEEEEeCC-Cc--EEEEEEeccccc--CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLAG-GT--TVVVKKVSLHSF--KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~-g~--~vavK~l~~~~~--~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||.||+|+..+ |. .+|+|.+..... ..+.|.+|++++.++ +||||++++++|.. ++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-CCCceEEEEeCC
Confidence 469999999999999753 43 578888864322 246799999999999 89999999999875 457899999999
Q ss_pred CCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 592 CGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
+|+|.++++...... ......++|.++..++.+++.|++|||+. +++||||||+||++++++.+|++||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCC
Confidence 999999997543111 11123589999999999999999999987 9999999999999999999999999
Q ss_pred cccccc
Q 035786 664 SELHAQ 669 (693)
Q Consensus 664 gla~~~ 669 (693)
|+++..
T Consensus 157 gl~~~~ 162 (270)
T cd05047 157 GLSRGQ 162 (270)
T ss_pred CCcccc
Confidence 998643
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.8e-22 Score=207.20 Aligned_cols=147 Identities=22% Similarity=0.332 Sum_probs=128.7
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
+|...+.||+|+||.||+|... +++.||+|........ .+.|.+|++++++++|+||+++++++.+ +...++||||+
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 84 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY-ENKLWILIEFC 84 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEec-CCeEEEEeecc
Confidence 3556678999999999999974 6889999998654322 4679999999999999999999999875 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.+++.... ..+++.....++.+++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 85 ~~~~L~~~~~~~~-------~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~ 154 (280)
T cd06611 85 DGGALDSIMLELE-------RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNK 154 (280)
T ss_pred CCCcHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhc
Confidence 9999999987532 3589999999999999999999998 89999999999999999999999999987653
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.7e-22 Score=203.50 Aligned_cols=151 Identities=22% Similarity=0.360 Sum_probs=124.6
Q ss_pred CCccCccccCCeeeEEEEEeC----CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCC-----
Q 035786 514 FSETNLIKKGHSGDLFKGTLA----GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHET----- 581 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~----~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~----- 581 (693)
|...++||+|+||.||+|.+. +++.||||.+..... ..+++.+|++++++++||||+++++++...+.
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 345678999999999999863 368899999865332 24578999999999999999999998864321
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++++||+++|+|.+++...... .....+++....+++.+++.|++|||+. +|+||||||+||++++++.+|++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIG--EEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhccc--CCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEEC
Confidence 237899999999999988643211 1123589999999999999999999988 89999999999999999999999
Q ss_pred Cccccccc
Q 035786 662 SLSELHAQ 669 (693)
Q Consensus 662 Dfgla~~~ 669 (693)
|||+++..
T Consensus 156 dfg~~~~~ 163 (273)
T cd05074 156 DFGLSKKI 163 (273)
T ss_pred cccccccc
Confidence 99999876
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.7e-22 Score=203.11 Aligned_cols=139 Identities=23% Similarity=0.403 Sum_probs=122.5
Q ss_pred CccccCCeeeEEEEEeC--C--CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA--G--GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~--~--g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
+.||+|+||.||+|++. + +..||+|.+..... ..+++.+|++++++++|+|||++++++.. +..++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG--EPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC--CceEEEEEeCC
Confidence 46999999999999863 2 26899999875544 35679999999999999999999998753 46899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+|+|.++++... .++|..+..++.+++.|++|||.. +++||||||+||++++++.+|++|||+++..
T Consensus 79 ~~~L~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 79 LGPLLKYLKKRR--------EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred CCcHHHHHHhCC--------CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEecccccccee
Confidence 999999997532 489999999999999999999987 8999999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.2e-22 Score=206.51 Aligned_cols=146 Identities=21% Similarity=0.340 Sum_probs=127.6
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
.|...+.||+|+||.||+|+.. +++.||+|.+...... .++|.+|++++++++|+||+++.+++.. ++..++||||+
T Consensus 13 ~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 91 (292)
T cd06644 13 VWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYW-DGKLWIMIEFC 91 (292)
T ss_pred hhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe-CCeEEEEEecC
Confidence 3556678999999999999975 5889999998654332 4678999999999999999999998875 46889999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++|+|..++.... ..++|..+..++.|++.|++|||+. +|+||||||+||+++.++++||+|||+++..
T Consensus 92 ~~~~l~~~~~~~~-------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 160 (292)
T cd06644 92 PGGAVDAIMLELD-------RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKN 160 (292)
T ss_pred CCCcHHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceec
Confidence 9999998876432 3489999999999999999999988 9999999999999999999999999998764
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-22 Score=210.32 Aligned_cols=145 Identities=21% Similarity=0.289 Sum_probs=127.2
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+|+..+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++++++||||++++++|.+ +...++|||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 80 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR-KKRLYLVFE 80 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc-CCeEEEEEe
Confidence 4667789999999999999985 589999998864322 24678899999999999999999998865 567899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++++|.++.+.. ..++|.++..++.++++||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 81 ~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~ 149 (286)
T cd07846 81 FVDHTVLDDLEKYP--------NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFART 149 (286)
T ss_pred cCCccHHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeee
Confidence 99999998876532 2489999999999999999999988 899999999999999999999999999887
Q ss_pred c
Q 035786 669 Q 669 (693)
Q Consensus 669 ~ 669 (693)
.
T Consensus 150 ~ 150 (286)
T cd07846 150 L 150 (286)
T ss_pred c
Confidence 6
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.3e-22 Score=203.83 Aligned_cols=142 Identities=23% Similarity=0.369 Sum_probs=124.8
Q ss_pred CccccCCeeeEEEEEeCC--C--cEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLAG--G--TTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~--g--~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++||+|+||.||+|.+.+ + ..||||.+..... ..++|.+|++++++++|||||++++++.+ ...++|+||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT--HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC--CeEEEEEEecC
Confidence 368999999999999743 3 3699999976544 25689999999999999999999999875 67899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|+|.+++..... ..++|.....++.|++.||+|||.. +++||||||+||+++.++.+|++|||+++...
T Consensus 79 ~~~L~~~l~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~ 148 (257)
T cd05040 79 LGSLLDRLRKDAL------GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALP 148 (257)
T ss_pred CCcHHHHHHhccc------ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccc
Confidence 9999999975321 3589999999999999999999988 99999999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-22 Score=208.09 Aligned_cols=145 Identities=25% Similarity=0.393 Sum_probs=126.4
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
|+..+.||+|+||.||+|... +++.||+|.+..... ..+++.+|++++++++||||+++++++.. ++..++||||+
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 84 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLK-GTKLWIIMEYL 84 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccccc-CCceEEEEEcc
Confidence 444567999999999999864 588999998864332 24578999999999999999999998875 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.+++.. ..+++.....++.++++|++|||+. +++|+||||+||++++++.+|++|||+++...
T Consensus 85 ~~~~L~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06642 85 GGGSALDLLKP---------GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred CCCcHHHHhhc---------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEcccccccccc
Confidence 99999998853 2488999999999999999999987 99999999999999999999999999998764
Q ss_pred C
Q 035786 671 D 671 (693)
Q Consensus 671 ~ 671 (693)
.
T Consensus 153 ~ 153 (277)
T cd06642 153 D 153 (277)
T ss_pred C
Confidence 3
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-22 Score=210.15 Aligned_cols=141 Identities=23% Similarity=0.346 Sum_probs=124.2
Q ss_pred cCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 517 TNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
...||+|+||.||++.. .++..||||++...... .+.+.+|+.++.+++|+||+++++++.. ++..++||||+++|+
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-~~~~~lv~e~~~~~~ 105 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLV-GDELWVVMEFLEGGA 105 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheec-CCeEEEEEeCCCCCc
Confidence 35699999999999986 46889999998654333 4678999999999999999999998875 467899999999999
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|.+++.. ..+++.+...++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 106 L~~~~~~---------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (292)
T cd06658 106 LTDIVTH---------TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS 169 (292)
T ss_pred HHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcc
Confidence 9998853 2388999999999999999999988 89999999999999999999999999988653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.1e-22 Score=207.50 Aligned_cols=148 Identities=22% Similarity=0.333 Sum_probs=126.5
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++++|...+.||+|+||.||+|.. .+|+.||+|++...... ...+.+|++++.+++|+||+++.+++.+ +...++|
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~~~lv 81 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT-KETLTFV 81 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec-CCeEEEE
Confidence 456788889999999999999986 46889999998654322 3467899999999999999999998875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
+||++ +++.+++.... ..+.+.+...++.+++.||+|||+. +|+||||||+||+++.++++||+|||++
T Consensus 82 ~e~~~-~~l~~~~~~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 150 (291)
T cd07870 82 FEYMH-TDLAQYMIQHP-------GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLA 150 (291)
T ss_pred Eeccc-CCHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccc
Confidence 99996 78877775422 2478888889999999999999988 8999999999999999999999999999
Q ss_pred ccc
Q 035786 667 HAQ 669 (693)
Q Consensus 667 ~~~ 669 (693)
+..
T Consensus 151 ~~~ 153 (291)
T cd07870 151 RAK 153 (291)
T ss_pred ccc
Confidence 865
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.5e-22 Score=209.74 Aligned_cols=153 Identities=18% Similarity=0.312 Sum_probs=127.9
Q ss_pred CCCccCccccCCeeeEEEEEeC--------CCcEEEEEEeccccc--CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA--------GGTTVVVKKVSLHSF--KKESYMMELDLFSRV-SHARLVPLLGQCLEHET 581 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~--------~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~ 581 (693)
+|...+.||+|+||.||+|... ++..||+|.+..... ..+++.+|++++.++ +|+||++++++|.. ++
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~-~~ 97 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DG 97 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-CC
Confidence 4667789999999999999752 235799999875422 245788999999999 89999999999875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD 653 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld 653 (693)
..++||||+++|+|.++++...... ......++|.++++++.+++.||+|||+. +++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEc
Confidence 7899999999999999997643210 01123589999999999999999999987 999999999999999
Q ss_pred CCCceEECCccccccc
Q 035786 654 DKFEVRLGSLSELHAQ 669 (693)
Q Consensus 654 ~~~~~ki~Dfgla~~~ 669 (693)
+++++|++|||+++..
T Consensus 175 ~~~~~kL~dfg~a~~~ 190 (307)
T cd05098 175 EDNVMKIADFGLARDI 190 (307)
T ss_pred CCCcEEECCCcccccc
Confidence 9999999999998865
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.4e-22 Score=201.17 Aligned_cols=147 Identities=18% Similarity=0.270 Sum_probs=127.4
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
|...+.||+|+||.||+++.. +++.||+|.+.... ...+.+.+|++++++++|+||+++.+++.+ ++..++||||+
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 80 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEA-DGHLYIVMEYC 80 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEE-CCEEEEEEeeC
Confidence 556788999999999999864 68899999886432 224678899999999999999999998865 46899999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.+++..... ..+++.....++.+++.||.|||+. +|+|+||||+||++++++.++++|||+++...
T Consensus 81 ~~~~l~~~~~~~~~------~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 151 (255)
T cd08219 81 DGGDLMQKIKLQRG------KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLT 151 (255)
T ss_pred CCCcHHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeec
Confidence 99999998864321 3478899999999999999999988 99999999999999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.7e-22 Score=203.61 Aligned_cols=145 Identities=21% Similarity=0.374 Sum_probs=126.1
Q ss_pred CCccCccccCCeeeEEEEEeC-CC---cEEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GG---TTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g---~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+...+.||+|+||.||+|+.. ++ ..||||.++... ...++|..|++++++++||||+++.+++.+ +...++||
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~~~lv~ 84 (269)
T cd05065 6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-SRPVMIIT 84 (269)
T ss_pred eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-CCceEEEE
Confidence 556788999999999999974 33 369999986532 225689999999999999999999998864 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++... ..+++.++..++.|++.|++|||+. +++||||||+||+++.+..+|++|||+++
T Consensus 85 e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~ 154 (269)
T cd05065 85 EFMENGALDSFLRQND-------GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 154 (269)
T ss_pred ecCCCCcHHHHHhhCC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccc
Confidence 9999999999997532 2489999999999999999999988 99999999999999999999999999988
Q ss_pred cc
Q 035786 668 AQ 669 (693)
Q Consensus 668 ~~ 669 (693)
.+
T Consensus 155 ~~ 156 (269)
T cd05065 155 FL 156 (269)
T ss_pred cc
Confidence 76
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-22 Score=214.11 Aligned_cols=148 Identities=26% Similarity=0.425 Sum_probs=129.8
Q ss_pred CCccCccccCCeeeEEEEEeCC---C--cEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLAG---G--TTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~---g--~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
....++||+|-||.||+|++.+ | ..||||.-+.+.. ..+.|.+|.-+|++++|||||+|+|.|.+ ...++|
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e--~P~Wiv 468 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE--QPMWIV 468 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec--cceeEE
Confidence 4556789999999999999743 3 3589997765433 36789999999999999999999999975 579999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
||.++-|.|+.||+... ..|+-.+...++.|+..||+|||+. ++|||||.++|||+...--+|++|||+.
T Consensus 469 mEL~~~GELr~yLq~nk-------~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLS 538 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNK-------DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLS 538 (974)
T ss_pred EecccchhHHHHHHhcc-------ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchh
Confidence 99999999999998654 3588999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCC
Q 035786 667 HAQGDSH 673 (693)
Q Consensus 667 ~~~~~~~ 673 (693)
|-+.+..
T Consensus 539 R~~ed~~ 545 (974)
T KOG4257|consen 539 RYLEDDA 545 (974)
T ss_pred hhccccc
Confidence 9885543
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.1e-22 Score=207.35 Aligned_cols=146 Identities=19% Similarity=0.218 Sum_probs=125.1
Q ss_pred CCccCccccCCeeeEEEEEe----CCCcEEEEEEeccccc-----CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 514 FSETNLIKKGHSGDLFKGTL----AGGTTVVVKKVSLHSF-----KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~----~~g~~vavK~l~~~~~-----~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
|+..+.||+|+||.||+++. .+|+.||+|.+..... ..+++.+|++++.++ +|+||+++.+++.. +...
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~~ 80 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-DTKL 80 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec-CCeE
Confidence 55677899999999999985 4689999999864321 246788999999999 58999999876654 5678
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++||||+++|+|.+++... ..+++.+...++.++++||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--------~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 149 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--------ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDF 149 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeC
Confidence 8999999999999999753 2478888899999999999999987 9999999999999999999999999
Q ss_pred ccccccCC
Q 035786 664 SELHAQGD 671 (693)
Q Consensus 664 gla~~~~~ 671 (693)
|+++....
T Consensus 150 g~~~~~~~ 157 (290)
T cd05613 150 GLSKEFHE 157 (290)
T ss_pred ccceeccc
Confidence 99987643
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-22 Score=206.43 Aligned_cols=142 Identities=24% Similarity=0.337 Sum_probs=120.6
Q ss_pred CccccCCeeeEEEEEeCC--------CcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 518 NLIKKGHSGDLFKGTLAG--------GTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~--------g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+.||+|+||.||+|.... ...||+|.+...... .++|.+|+.+++.++|||||++++++... ...++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~-~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG-DESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-CCcEEEEe
Confidence 369999999999998632 235888888654333 46789999999999999999999999863 57899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc--------eEE
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE--------VRL 660 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~--------~ki 660 (693)
|+++|+|.++++... ..++|..+.+++.|++.||+|||+. +|+||||||+||+++.+.+ +|+
T Consensus 80 ~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 80 YVKFGSLDTYLKKNK-------NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred cCCCCcHHHHHhcCC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEe
Confidence 999999999997533 2489999999999999999999988 9999999999999988765 599
Q ss_pred CCcccccccC
Q 035786 661 GSLSELHAQG 670 (693)
Q Consensus 661 ~Dfgla~~~~ 670 (693)
+|||++....
T Consensus 150 ~d~g~~~~~~ 159 (258)
T cd05078 150 SDPGISITVL 159 (258)
T ss_pred cccccccccC
Confidence 9999987653
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.7e-22 Score=201.79 Aligned_cols=144 Identities=25% Similarity=0.439 Sum_probs=126.2
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|.. +++.||+|.+.... ..+.|.+|++++.+++|||++++++++.. +..++||||+++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~v~e~~~~ 82 (254)
T cd05083 7 KLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILH--NGLYIVMELMSK 82 (254)
T ss_pred HceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcC--CCcEEEEECCCC
Confidence 366778999999999999985 57889999986432 35679999999999999999999998864 457999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|+|.++++.... ..+++.++.+++.+++.|++|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 83 ~~L~~~l~~~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~ 150 (254)
T cd05083 83 GNLVNFLRTRGR------ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVG 150 (254)
T ss_pred CCHHHHHHhcCc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceec
Confidence 999999975322 3589999999999999999999987 9999999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.5e-22 Score=210.64 Aligned_cols=153 Identities=18% Similarity=0.306 Sum_probs=127.2
Q ss_pred CCccCccccCCeeeEEEEEeC--------CCcEEEEEEeccccc--CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCe
Q 035786 514 FSETNLIKKGHSGDLFKGTLA--------GGTTVVVKKVSLHSF--KKESYMMELDLFSRV-SHARLVPLLGQCLEHETE 582 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~--------~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 582 (693)
|...+.||+|+||.||+|... .+..||+|.+..... ..++|.+|++++.++ +||||++++++|.+ ++.
T Consensus 14 ~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~ 92 (334)
T cd05100 14 LTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGP 92 (334)
T ss_pred eeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc-CCc
Confidence 566789999999999999742 124799998864322 246799999999999 89999999999875 457
Q ss_pred eEEEEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD 654 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~ 654 (693)
.++||||+++|+|.+++....... ......++|.++..++.|++.||+|||.. +|+||||||+||++++
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~~ 169 (334)
T cd05100 93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVTE 169 (334)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcC
Confidence 899999999999999997532100 01224589999999999999999999987 9999999999999999
Q ss_pred CCceEECCcccccccC
Q 035786 655 KFEVRLGSLSELHAQG 670 (693)
Q Consensus 655 ~~~~ki~Dfgla~~~~ 670 (693)
++++||+|||+++...
T Consensus 170 ~~~~kL~Dfg~~~~~~ 185 (334)
T cd05100 170 DNVMKIADFGLARDVH 185 (334)
T ss_pred CCcEEECCcccceecc
Confidence 9999999999998763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.5e-22 Score=207.40 Aligned_cols=144 Identities=22% Similarity=0.385 Sum_probs=128.4
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
+|+..+.||.|+||.||+|.. .+|+.||||.+...... .+.+.+|+++++.++||||+++++++.. ++..++|+||+
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~ 98 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLV-GDELFVVMEYL 98 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEec-CceEEEEEEec
Confidence 467778899999999999985 57899999998654433 5678899999999999999999999875 46889999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++|+|.+++.. ..++|.++..++.+++.|++|||.. +++||||||+||++++++.+||+|||+++..
T Consensus 99 ~~~~L~~~~~~---------~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~ 165 (296)
T cd06655 99 AGGSLTDVVTE---------TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQI 165 (296)
T ss_pred CCCcHHHHHHh---------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhc
Confidence 99999998863 2489999999999999999999988 9999999999999999999999999998865
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.9e-22 Score=207.19 Aligned_cols=149 Identities=19% Similarity=0.341 Sum_probs=128.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +++.||+|+++..... ...+.+|++++.+++||||+++.+++...+ ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 35777789999999999999975 5889999999754322 345788999999999999999999887532 578999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||++ ++|.+++.... ..+++.+...++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 85 ~e~~~-~~L~~~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~ 153 (293)
T cd07843 85 MEYVE-HDLKSLMETMK-------QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLA 153 (293)
T ss_pred ehhcC-cCHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCce
Confidence 99998 59999887532 2589999999999999999999988 8999999999999999999999999998
Q ss_pred cccCC
Q 035786 667 HAQGD 671 (693)
Q Consensus 667 ~~~~~ 671 (693)
+....
T Consensus 154 ~~~~~ 158 (293)
T cd07843 154 REYGS 158 (293)
T ss_pred eeccC
Confidence 87644
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.6e-22 Score=208.26 Aligned_cols=154 Identities=19% Similarity=0.319 Sum_probs=127.8
Q ss_pred CCCccCccccCCeeeEEEEEeC--------CCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA--------GGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHET 581 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~--------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~ 581 (693)
+|...+.||+|+||.||+|+.. +...||+|.+...... .++|.+|++++.++ +|||||+++++|.+ +.
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~ 91 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ-EG 91 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc-CC
Confidence 4667789999999999999742 2457999988653322 45788999999999 69999999998875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCC--------CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDL--------EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD 653 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~--------~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld 653 (693)
..++||||+++|+|.+++...... .......++|.+..+++.|++.||+|||+. +|+||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEc
Confidence 789999999999999999753210 001124589999999999999999999987 999999999999999
Q ss_pred CCCceEECCcccccccC
Q 035786 654 DKFEVRLGSLSELHAQG 670 (693)
Q Consensus 654 ~~~~~ki~Dfgla~~~~ 670 (693)
+++.+|++|||+++...
T Consensus 169 ~~~~~kL~Dfg~~~~~~ 185 (314)
T cd05099 169 EDNVMKIADFGLARGVH 185 (314)
T ss_pred CCCcEEEcccccccccc
Confidence 99999999999998763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.6e-22 Score=204.23 Aligned_cols=147 Identities=20% Similarity=0.356 Sum_probs=128.6
Q ss_pred CCccCccccCCeeeEEEEEeC-----CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-----GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-----~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~l 585 (693)
|...+.||+|+||.||+|++. +++.||||.+...... .++|.+|++++++++|+||+++++++... +...++
T Consensus 6 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05038 6 LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRL 85 (284)
T ss_pred chhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEE
Confidence 555678999999999999864 3679999999765543 56899999999999999999999988642 236789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..++|.++..++.+++.||+|||+. +|+||||||+||+++.++.+|++|||+
T Consensus 86 v~e~~~~~~l~~~l~~~~-------~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 155 (284)
T cd05038 86 IMEYLPSGSLRDYLQRHR-------DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGL 155 (284)
T ss_pred EEecCCCCCHHHHHHhCc-------cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccc
Confidence 999999999999997533 2499999999999999999999988 899999999999999999999999999
Q ss_pred ccccC
Q 035786 666 LHAQG 670 (693)
Q Consensus 666 a~~~~ 670 (693)
++...
T Consensus 156 ~~~~~ 160 (284)
T cd05038 156 AKVLP 160 (284)
T ss_pred ccccc
Confidence 98864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=200.78 Aligned_cols=150 Identities=29% Similarity=0.486 Sum_probs=128.3
Q ss_pred CccccCCeeeEEEEEeCC----CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
+.||+|+||.||+|+..+ +..||||.+...... .+.+.+|++++.+++|+||+++++++.+ +...++||||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-EEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-CCceEEEEEecc
Confidence 469999999999999754 789999999765433 5689999999999999999999998876 568899999999
Q ss_pred CCChhhhhhccCCCC-CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLE-DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~-~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|+|.+++....... ......++|.++.+++.++++|++|||.. +|+||||||+||++++++.+|++|||.++...
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccccc
Confidence 999999997642100 00014589999999999999999999998 99999999999999999999999999998874
Q ss_pred C
Q 035786 671 D 671 (693)
Q Consensus 671 ~ 671 (693)
.
T Consensus 157 ~ 157 (262)
T cd00192 157 D 157 (262)
T ss_pred c
Confidence 3
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=200.62 Aligned_cols=147 Identities=20% Similarity=0.357 Sum_probs=131.1
Q ss_pred CCCCccCccccCCeeeEEEEEeCC-CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
++|+..+.||+|+||.||+|...+ +..||+|.+..... .++|.+|++++++++|+||+++++++.+ +...++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFK-NTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeec-CCcEEEEEecC
Confidence 457778899999999999999864 88999999875433 6789999999999999999999998876 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++++|.++++... ..++|.....++.+++.|+.|||+. +|+||||+|+||++++++++||+|||++....
T Consensus 81 ~~~~L~~~l~~~~-------~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~ 150 (256)
T cd06612 81 GAGSVSDIMKITN-------KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLT 150 (256)
T ss_pred CCCcHHHHHHhCc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcc
Confidence 9999999996432 3589999999999999999999988 89999999999999999999999999988764
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=208.90 Aligned_cols=142 Identities=23% Similarity=0.299 Sum_probs=122.2
Q ss_pred cCccccC--CeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 517 TNLIKKG--HSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 517 ~~~ig~G--~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
..+||+| +||+||+++. .+|+.||||++...... .+.+.+|+++++.++|||||+++++|.. ++..++|+||+
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~~ 81 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWVVTSFM 81 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-CCEEEEEEecc
Confidence 4579999 7899999986 57899999999754322 3467789999999999999999999875 46889999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
++|+|.+++..... ..++|.++..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+..
T Consensus 82 ~~~~l~~~~~~~~~------~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~ 150 (327)
T cd08227 82 AYGSAKDLICTHFM------DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 150 (327)
T ss_pred CCCcHHHHHHhhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhc
Confidence 99999999964321 2489999999999999999999988 899999999999999999999999986544
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.9e-22 Score=205.60 Aligned_cols=146 Identities=21% Similarity=0.357 Sum_probs=126.6
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+.. +++.||||.+..... ....+.+|++++++++|+||+++++++.+ ++..++|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHT-KKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEec-CCeEEEEEe
Confidence 45777889999999999999975 689999999865332 23467889999999999999999998875 468899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|++ |+|.+++.+.. ..+++.....++.+++.||.|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 84 ~~~-~~L~~~~~~~~-------~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 152 (291)
T cd07844 84 YLD-TDLKQYMDDCG-------GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARA 152 (291)
T ss_pred cCC-CCHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccc
Confidence 998 59999887532 2488999999999999999999988 999999999999999999999999999876
Q ss_pred c
Q 035786 669 Q 669 (693)
Q Consensus 669 ~ 669 (693)
.
T Consensus 153 ~ 153 (291)
T cd07844 153 K 153 (291)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.8e-22 Score=204.49 Aligned_cols=146 Identities=22% Similarity=0.328 Sum_probs=128.4
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|...+.||+|+||.||+|+.. +|..||||++..... ..+.+.+|++++++++||||+++++++.. +...++||||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~~v~e~ 80 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH-GSGFVLVMEY 80 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec-CCeeEEEecc
Confidence 556678999999999999964 689999999875432 24679999999999999999999998875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+ +++|.++++... ..+++.++..++.++++||+|||+. +|+|+||||+||++++++.++++|||+++..
T Consensus 81 ~-~~~L~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~ 149 (286)
T cd07832 81 M-PSDLSEVLRDEE-------RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLF 149 (286)
T ss_pred c-CCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccc
Confidence 9 999999987532 3589999999999999999999988 8999999999999999999999999999886
Q ss_pred CC
Q 035786 670 GD 671 (693)
Q Consensus 670 ~~ 671 (693)
..
T Consensus 150 ~~ 151 (286)
T cd07832 150 SE 151 (286)
T ss_pred cC
Confidence 43
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.8e-22 Score=206.33 Aligned_cols=146 Identities=21% Similarity=0.362 Sum_probs=126.6
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|+..+.||+|+||.||+|.. .+|+.||+|.+...... .+.|.+|++++.+++||||+++.+++... +..++||||
T Consensus 6 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e~ 84 (284)
T cd06620 6 DLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE-NNICMCMEF 84 (284)
T ss_pred HHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-CEEEEEEec
Confidence 355567899999999999996 46889999988654322 56799999999999999999999998764 688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.++++.. ..++|.....++.+++.|+.|||+.. +|+||||||+||+++++++++|+|||+++..
T Consensus 85 ~~~~~L~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~ 154 (284)
T cd06620 85 MDCGSLDRIYKKG--------GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGEL 154 (284)
T ss_pred CCCCCHHHHHHhc--------cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccch
Confidence 9999999988653 24899999999999999999999632 6999999999999999999999999998765
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.2e-22 Score=208.26 Aligned_cols=140 Identities=21% Similarity=0.307 Sum_probs=123.8
Q ss_pred cCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 517 TNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
...||+|+||.||+|.. .+++.||||.+..... ..+.+.+|++++..++||||+++++++.. ++..++|+||+++|+
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~iv~e~~~~~~ 104 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLV-GEELWVLMEFLQGGA 104 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheee-CCeEEEEEecCCCCC
Confidence 34699999999999986 4689999999865433 35678899999999999999999998875 467899999999999
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|.+++.. ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 105 L~~~~~~---------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~ 167 (297)
T cd06659 105 LTDIVSQ---------TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 167 (297)
T ss_pred HHHHHhh---------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence 9988753 2489999999999999999999988 8999999999999999999999999998765
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.3e-21 Score=221.01 Aligned_cols=321 Identities=25% Similarity=0.351 Sum_probs=224.4
Q ss_pred cCCCCCHHHHHHHHHHHHhCCCCC------CCCCCCCCCCCCCc---------------ceeecCCCEeEEEcCCCCccc
Q 035786 18 QVPLDSAVQRSALLDLRSSLGLRS------RDWPLRTEPCRSWR---------------GVQCQNGQVIAINISGFKRTR 76 (693)
Q Consensus 18 ~~~~~~~~~~~aLl~~k~~l~~~~------~~W~~~~~~C~~W~---------------gv~C~~~~v~~l~l~~~~~~~ 76 (693)
+.....++|...+++..+.+..+. ..|...+++|-.=. -|.|.++.||.+...+.....
T Consensus 56 ~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~~~ 135 (754)
T PRK15370 56 PPETASPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQAS 135 (754)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCchhhccccccCCCCcccccCCcchhhheeeecCCceEEecCCCcccccccccccccc
Confidence 355567899999999999997542 35988888884111 278877778777665422110
Q ss_pred c--cccCC-ccC---------------------ccccc--cCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCC
Q 035786 77 I--GRLNP-RFA---------------------VDSLG--NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSL 130 (693)
Q Consensus 77 ~--g~~~~-~~~---------------------~~~l~--~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l 130 (693)
. |.-.. ... ...+. -......|+++++.++ .+|..+ .+.|+.|+|++|.+
T Consensus 136 ~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~I---p~~L~~L~Ls~N~L 211 (754)
T PRK15370 136 SASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACI---PEQITTLILDNNEL 211 (754)
T ss_pred cCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCccc---ccCCcEEEecCCCC
Confidence 0 00000 000 00010 1134577888888776 467654 35788999999998
Q ss_pred CcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccc
Q 035786 131 SGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGL 210 (693)
Q Consensus 131 ~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 210 (693)
+ .+|..+. ++|++|+|++|+++ .+|..+. .+|+.|+|++|.++ .+|..+. ++|+.|++++|+++ .+|..+
T Consensus 212 t-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l 281 (754)
T PRK15370 212 K-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENL 281 (754)
T ss_pred C-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-cccccc
Confidence 8 4666553 58999999999988 5676553 47899999999988 6777664 57999999999988 467665
Q ss_pred cCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCC
Q 035786 211 YSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQ 290 (693)
Q Consensus 211 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~ 290 (693)
. ++|+.|++++|++++ +|..+. ++|+.|++++|+++. +|..+ .++|+.|++++|.+++ +|..+ .++|+
T Consensus 282 ~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l---~~sL~ 349 (754)
T PRK15370 282 P--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LPETL--PPGLKTLEAGENALTS-LPASL---PPELQ 349 (754)
T ss_pred C--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CCccc--cccceeccccCCcccc-CChhh---cCccc
Confidence 4 589999999999885 565443 478889999999985 45444 2688899999999885 66544 25889
Q ss_pred EEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC------CCCCCCCEEE
Q 035786 291 VVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS------SSFRKFSLID 364 (693)
Q Consensus 291 ~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~------~~~~~l~~ld 364 (693)
.|++++|+|+ .+|..+ .++|+.|+|++|+|+ .+|... ...|+.|++++|+|.+ +|. ...+.+..++
T Consensus 350 ~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt-~LP~~l---~~sL~~LdLs~N~L~~-LP~sl~~~~~~~~~l~~L~ 421 (754)
T PRK15370 350 VLDVSKNQIT-VLPETL--PPTITTLDVSRNALT-NLPENL---PAALQIMQASRNNLVR-LPESLPHFRGEGPQPTRII 421 (754)
T ss_pred EEECCCCCCC-cCChhh--cCCcCEEECCCCcCC-CCCHhH---HHHHHHHhhccCCccc-CchhHHHHhhcCCCccEEE
Confidence 9999999987 466655 368999999999998 456432 2357888999999873 443 2346678889
Q ss_pred ccCCccee
Q 035786 365 LSSNYFQG 372 (693)
Q Consensus 365 Ls~N~l~g 372 (693)
+.+|+|+.
T Consensus 422 L~~Npls~ 429 (754)
T PRK15370 422 VEYNPFSE 429 (754)
T ss_pred eeCCCccH
Confidence 99998863
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=201.77 Aligned_cols=147 Identities=24% Similarity=0.375 Sum_probs=126.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc------cCHHHHHHHHHHHhcCCCCCccceeEEEEcCC-Cee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS------FKKESYMMELDLFSRVSHARLVPLLGQCLEHE-TEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~------~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~ 583 (693)
.+|...+.||+|+||.||+|+. .+|+.||+|.+.... ...+.|.+|++++++++|+||+++++++.+.+ ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 3577788999999999999986 458999999875321 11357889999999999999999999876532 357
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++|+||+++|+|.+++... ..+++....+++.+++.|+.|||+. +|+||||||+||+++.++.++|+||
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--------~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~df 150 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--------GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDF 150 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcc
Confidence 8999999999999998643 2378899999999999999999988 8999999999999999999999999
Q ss_pred cccccc
Q 035786 664 SELHAQ 669 (693)
Q Consensus 664 gla~~~ 669 (693)
|+++..
T Consensus 151 g~~~~~ 156 (264)
T cd06653 151 GASKRI 156 (264)
T ss_pred cccccc
Confidence 999865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.6e-22 Score=210.43 Aligned_cols=137 Identities=18% Similarity=0.163 Sum_probs=110.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC--CCcEEEEEEecccc------cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA--GGTTVVVKKVSLHS------FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~--~g~~vavK~l~~~~------~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
..|...+.||+|+||+||+|... +++.||||++.... ...+.|.+|++++.+++|+|+|+.+..+ +..
T Consensus 18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~ 93 (365)
T PRK09188 18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKD 93 (365)
T ss_pred CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCc
Confidence 45888899999999999999864 57888999875321 1245699999999999999999644221 357
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCC-CCCCeeeCCCCceEECC
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDV-QASSILLDDKFEVRLGS 662 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDl-k~~NILld~~~~~ki~D 662 (693)
++||||+++++|... .. .. ...++.++++||+|||+. +|+|||| ||+|||++.++++||+|
T Consensus 94 ~LVmE~~~G~~L~~~-~~-----------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiD 155 (365)
T PRK09188 94 GLVRGWTEGVPLHLA-RP-----------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVID 155 (365)
T ss_pred EEEEEccCCCCHHHh-Cc-----------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEE
Confidence 999999999999632 10 00 135678899999999998 9999999 99999999999999999
Q ss_pred cccccccC
Q 035786 663 LSELHAQG 670 (693)
Q Consensus 663 fgla~~~~ 670 (693)
||+|+...
T Consensus 156 FGlA~~~~ 163 (365)
T PRK09188 156 FQLASVFR 163 (365)
T ss_pred Cccceecc
Confidence 99999763
|
|
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=203.19 Aligned_cols=143 Identities=27% Similarity=0.410 Sum_probs=126.6
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
|+..+.||+|+||.||+|.. .+++.||||....... ..+.|.+|++++.+++||||+++++++.+ ++..++||||+
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~ 84 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLWIIMEYL 84 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe-CCeEEEEEEeC
Confidence 55677899999999999986 4688999998764332 24578999999999999999999998875 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++|+|.+++.. ..++|.....++.+++.|+.|||+. +++|+||||+||+++.++.++++|||+++..
T Consensus 85 ~~~~l~~~i~~---------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06641 85 GGGSALDLLEP---------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL 151 (277)
T ss_pred CCCcHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceec
Confidence 99999999864 2488999999999999999999988 9999999999999999999999999998775
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.4e-22 Score=206.12 Aligned_cols=149 Identities=21% Similarity=0.341 Sum_probs=128.0
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|+..+.||+|+||.||++... +|+.||+|.+..... ..++|.+|++++.+++|+||+++++++.. ++..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~ 80 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI-EGAVYMCMEY 80 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec-CCeEEEEEee
Confidence 3556678999999999999975 689999998865322 24579999999999999999999998875 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.++++.... ...+++..+..++.+++.||.|||+.+ +|+||||||+||+++.++.+||+|||+++.+
T Consensus 81 ~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 153 (286)
T cd06622 81 MDAGSLDKLYAGGVA-----TEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNL 153 (286)
T ss_pred cCCCCHHHHHHhccc-----cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999999999875321 135899999999999999999999632 7999999999999999999999999998765
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=202.83 Aligned_cols=144 Identities=22% Similarity=0.349 Sum_probs=125.2
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---C--------HHHHHHHHHHHhcCCCCCccceeEEEEcCCC
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---K--------KESYMMELDLFSRVSHARLVPLLGQCLEHET 581 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~--------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~ 581 (693)
|...+.||+|+||.||+|.. .+|+.||||++..... . .+.+.+|++++.+++|+|++++++++.. .+
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 81 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-EE 81 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc-CC
Confidence 45567899999999999985 4689999998753211 0 2468889999999999999999998875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++||||+++|+|.+++++. ..+++..+..++.+++.|+.|||+. +++||||||+||++++++.+|++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~ 150 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--------GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKIS 150 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--------cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEe
Confidence 789999999999999999753 2488999999999999999999987 89999999999999999999999
Q ss_pred Cccccccc
Q 035786 662 SLSELHAQ 669 (693)
Q Consensus 662 Dfgla~~~ 669 (693)
|||+++..
T Consensus 151 d~~~~~~~ 158 (272)
T cd06629 151 DFGISKKS 158 (272)
T ss_pred eccccccc
Confidence 99998865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=199.94 Aligned_cols=147 Identities=27% Similarity=0.486 Sum_probs=128.2
Q ss_pred CccCccccCCeeeEEEEEeCC-----CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 515 SETNLIKKGHSGDLFKGTLAG-----GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~~~-----g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
...+.||+|+||.||+++..+ +..||+|++..... ..+.+.+|++++.+++|+||+++++++.+. +..++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~i~ 80 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE-EPLMIVM 80 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC-CeeEEEE
Confidence 345789999999999999754 38899999976544 356899999999999999999999998764 6789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++..... ..++|.++..++.+++.|++|||+. +++||||||+||++++++.+|++|||+++
T Consensus 81 e~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~ 151 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP------KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSR 151 (258)
T ss_pred eccCCCCHHHHHHhhhh------ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCce
Confidence 99999999999975321 1289999999999999999999998 99999999999999999999999999998
Q ss_pred ccCC
Q 035786 668 AQGD 671 (693)
Q Consensus 668 ~~~~ 671 (693)
....
T Consensus 152 ~~~~ 155 (258)
T smart00219 152 DLYD 155 (258)
T ss_pred eccc
Confidence 7643
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.2e-22 Score=205.46 Aligned_cols=147 Identities=22% Similarity=0.379 Sum_probs=127.1
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+|+..+.||+|+||.||+|+.. +|+.||||++..... ..+.+.+|++++++++||||+++++++.+ +...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-ENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc-CCcEEEEee
Confidence 3677889999999999999864 689999998864332 23578999999999999999999999875 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|++ ++|.++++.... ..+++.+...++.+++.||+|||+. +++||||||+||++++++.+|++|||+++.
T Consensus 80 ~~~-~~l~~~~~~~~~------~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~ 149 (284)
T cd07860 80 FLH-QDLKKFMDASPL------SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARA 149 (284)
T ss_pred ccc-cCHHHHHHhCCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhh
Confidence 996 689998875322 3589999999999999999999987 899999999999999999999999999886
Q ss_pred cC
Q 035786 669 QG 670 (693)
Q Consensus 669 ~~ 670 (693)
.+
T Consensus 150 ~~ 151 (284)
T cd07860 150 FG 151 (284)
T ss_pred cc
Confidence 53
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-23 Score=218.80 Aligned_cols=158 Identities=18% Similarity=0.312 Sum_probs=129.6
Q ss_pred ccccCCeeeEEEEEeCC-CcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCChh
Q 035786 519 LIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLA 596 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~ 596 (693)
.+|.|+||+||||+-++ +...|.|.+...... -++|.-||++|+.++||+||+|++.|+. ++..++..|||.||-.+
T Consensus 39 ELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~-enkLwiliEFC~GGAVD 117 (1187)
T KOG0579|consen 39 ELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYF-ENKLWILIEFCGGGAVD 117 (1187)
T ss_pred hhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc-cCceEEEEeecCCchHh
Confidence 47889999999998654 455677777543333 5789999999999999999999997764 57899999999999998
Q ss_pred hhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCCCcce
Q 035786 597 SSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNV 676 (693)
Q Consensus 597 ~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~~~~~ 676 (693)
..+-.-. ..|+..+..-++.+++.||.|||++ .|||||||+.|||+.-++.++++|||.......+...
T Consensus 118 aimlEL~-------r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk- 186 (1187)
T KOG0579|consen 118 AIMLELG-------RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK- 186 (1187)
T ss_pred HHHHHhc-------cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHhh-
Confidence 8776433 4699999999999999999999999 9999999999999999999999999997664222221
Q ss_pred eeeeehhhhhhh
Q 035786 677 LTRFLWRQLYQS 688 (693)
Q Consensus 677 ~~~~~~~~~y~a 688 (693)
...+.|||+|||
T Consensus 187 RDsFIGTPYWMA 198 (1187)
T KOG0579|consen 187 RDSFIGTPYWMA 198 (1187)
T ss_pred hccccCCccccc
Confidence 334667777765
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-22 Score=200.05 Aligned_cols=164 Identities=18% Similarity=0.215 Sum_probs=134.2
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|+..+++|+|.||+|..++- ..|+.+|+|.+++.-.- ...-..|-+++...+||.+..|. |.++..+..+.|
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LK-YsFQt~drlCFV 246 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLK-YSFQTQDRLCFV 246 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhh-hhhccCceEEEE
Confidence 4588889999999999999984 57999999999764322 23566789999999999998876 555556788999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||..+|.|.-+|.+.+ .++..+-.-+...|..||.|||++ .||+||+|-+|.|||.|+.+||+|||+.
T Consensus 247 MeyanGGeLf~HLsrer--------~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLC 315 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER--------VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLC 315 (516)
T ss_pred EEEccCceEeeehhhhh--------cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccc
Confidence 99999999999887643 345544455788999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|.--... ..+..+||||+|.|
T Consensus 316 KE~I~~g-~t~kTFCGTPEYLA 336 (516)
T KOG0690|consen 316 KEEIKYG-DTTKTFCGTPEYLA 336 (516)
T ss_pred hhccccc-ceeccccCChhhcC
Confidence 9842222 22456999999987
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-21 Score=206.00 Aligned_cols=144 Identities=19% Similarity=0.297 Sum_probs=126.7
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||++... +++.||+|.+..... ..+.+.+|++++..++||||+++++++.. ++..++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET-KRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec-CCEEEEEE
Confidence 5777889999999999999964 578999999875432 23578899999999999999999998865 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++... ..+++.....++.+++.|++|||+. +|+||||||+||++++++++|++|||+++
T Consensus 81 e~~~g~~L~~~l~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~ 149 (305)
T cd05609 81 EYVEGGDCATLLKNI--------GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSK 149 (305)
T ss_pred ecCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCcc
Confidence 999999999999643 2488999999999999999999988 89999999999999999999999999987
Q ss_pred c
Q 035786 668 A 668 (693)
Q Consensus 668 ~ 668 (693)
.
T Consensus 150 ~ 150 (305)
T cd05609 150 I 150 (305)
T ss_pred c
Confidence 5
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-21 Score=202.13 Aligned_cols=144 Identities=24% Similarity=0.395 Sum_probs=127.0
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
|+..+.||+|+||.||+|+.. +++.||||.+..... ..+.|.+|++++++++|+||++++++|.+ +...++||||+
T Consensus 6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 84 (277)
T cd06640 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-GTKLWIIMEYL 84 (277)
T ss_pred hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCEEEEEEecC
Confidence 556678999999999999964 588999999875432 24679999999999999999999998875 46899999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.+++.. ..+++.+...++.+++.|++|||+. +++|+||+|+||+++++++++++|||+++...
T Consensus 85 ~~~~L~~~i~~---------~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06640 85 GGGSALDLLRA---------GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred CCCcHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceecc
Confidence 99999999864 2378889999999999999999988 99999999999999999999999999998763
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-21 Score=200.05 Aligned_cols=147 Identities=18% Similarity=0.285 Sum_probs=128.4
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|+..+.||+|+||.||+++. .+|+.||+|++.... ...+++.+|++++++++||||+++.+++.+ ++..++||||
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~ 80 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE-NGNLYIVMDY 80 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC-CCeEEEEEec
Confidence 66778999999999999986 468999999986432 224579999999999999999999998765 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.++++.... ..+++.+..+++.+++.|++|||+. +++|+||+|+||+++.+++++|+|||++..+
T Consensus 81 ~~~~~l~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~ 151 (256)
T cd08218 81 CEGGDLYKKINAQRG------VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVL 151 (256)
T ss_pred CCCCcHHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeec
Confidence 999999999875321 3478999999999999999999987 8999999999999999999999999999876
Q ss_pred C
Q 035786 670 G 670 (693)
Q Consensus 670 ~ 670 (693)
.
T Consensus 152 ~ 152 (256)
T cd08218 152 N 152 (256)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-21 Score=198.65 Aligned_cols=142 Identities=25% Similarity=0.467 Sum_probs=125.8
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCCh
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDL 595 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL 595 (693)
++||+|+||.||++...+++.||+|++..... ..++|.+|++++++++|+||+++++++.+ +...++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ-KQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-CCCeEEEEEcCCCCcH
Confidence 36999999999999987799999998865433 24679999999999999999999998875 4678999999999999
Q ss_pred hhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 596 ASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 596 ~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
.++++... ..+++.....++.+++.|++|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 80 ~~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~ 144 (251)
T cd05041 80 LTFLRKKK-------NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEE 144 (251)
T ss_pred HHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeecccccccc
Confidence 99997532 2488999999999999999999988 89999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.2e-22 Score=205.69 Aligned_cols=164 Identities=18% Similarity=0.240 Sum_probs=134.0
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+|+..+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++++++|+||+++.+++.+ ++..++|||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~iv~e 80 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-KGRLYLVFE 80 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-CCEEEEEEe
Confidence 4677789999999999999975 58899999886432 224679999999999999999999999876 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|++++.+..+.... ..+++.+...++.+++.|++|||.. +|+||||||+||++++++.+||+|||+++.
T Consensus 81 ~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~ 149 (288)
T cd07833 81 YVERTLLELLEASP--------GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARA 149 (288)
T ss_pred cCCCCHHHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccc
Confidence 99988777655432 2489999999999999999999988 899999999999999999999999999988
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
.........+...++.+|+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~ 169 (288)
T cd07833 150 LRARPASPLTDYVATRWYRA 169 (288)
T ss_pred cCCCccccccCcccccCCcC
Confidence 74433212233445555554
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.6e-22 Score=203.46 Aligned_cols=147 Identities=27% Similarity=0.427 Sum_probs=123.9
Q ss_pred CccccCCeeeEEEEEeCC-------CcEEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 518 NLIKKGHSGDLFKGTLAG-------GTTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~-------g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+.||+|+||.||+|+..+ ++.||||.+.... ....+|.+|++++++++||||++++++|.. +...++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL-NEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC-CCCeEEEEe
Confidence 469999999999998642 2579999886543 235679999999999999999999999875 457899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC-----ceEECCc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF-----EVRLGSL 663 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~-----~~ki~Df 663 (693)
|+++|+|.++++...... .....++|.+++.++.+++.|++|||+. +++|+||||+||+++.+. .+|++||
T Consensus 80 ~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 80 LMEGGDLLSYLRDARVER-FGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred ccCCCcHHHHHHHhhhcc-cCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCc
Confidence 999999999997543211 1123589999999999999999999987 899999999999999877 8999999
Q ss_pred cccccc
Q 035786 664 SELHAQ 669 (693)
Q Consensus 664 gla~~~ 669 (693)
|+++..
T Consensus 156 g~~~~~ 161 (269)
T cd05044 156 GLARDI 161 (269)
T ss_pred cccccc
Confidence 998865
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-21 Score=204.77 Aligned_cols=149 Identities=24% Similarity=0.347 Sum_probs=127.5
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHE----- 580 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----- 580 (693)
+.++|+..+.||+|+||.||+|+.. +|+.||||++..... ....+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4567888899999999999999975 589999999865332 2456888999999999999999999886532
Q ss_pred ----CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC
Q 035786 581 ----TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF 656 (693)
Q Consensus 581 ----~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~ 656 (693)
...++|+||+++ ++.+++.... ..++|.+...++.+++.||+|||+. +|+||||||+||++++++
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~ 153 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESGL-------VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKG 153 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcCC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCC
Confidence 257899999986 7777775421 3589999999999999999999988 999999999999999999
Q ss_pred ceEECCccccccc
Q 035786 657 EVRLGSLSELHAQ 669 (693)
Q Consensus 657 ~~ki~Dfgla~~~ 669 (693)
.+||+|||+++..
T Consensus 154 ~~kl~dfg~~~~~ 166 (302)
T cd07864 154 QIKLADFGLARLY 166 (302)
T ss_pred cEEeCcccccccc
Confidence 9999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-21 Score=199.41 Aligned_cols=154 Identities=20% Similarity=0.344 Sum_probs=129.2
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~lv~e 588 (693)
|+..+.||+|+||.||++.. .+|+.||+|.+..... ..+.+.+|++++++++|+||+++++++... +...+++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 56678899999999999985 4688999999865332 245688999999999999999999987643 345789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC--CCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC--NPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~--~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|+++|+|.+++..... ....++|.....++.+++.|++|||..+ ..+|+||||||+||++++++.+|++|||++
T Consensus 82 ~~~~~~L~~~l~~~~~----~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 82 YCEGGDLAQLIQKCKK----ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hccCCCHHHHHHHHhh----cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccc
Confidence 9999999999975321 1245899999999999999999999443 449999999999999999999999999999
Q ss_pred cccCC
Q 035786 667 HAQGD 671 (693)
Q Consensus 667 ~~~~~ 671 (693)
+....
T Consensus 158 ~~~~~ 162 (265)
T cd08217 158 KILGH 162 (265)
T ss_pred ccccC
Confidence 98743
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-21 Score=202.35 Aligned_cols=147 Identities=22% Similarity=0.380 Sum_probs=127.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|+..+.||+|++|.||+|+.. +|+.||||++..... ..+.+.+|++++++++|+||+++++++.+ ++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT-ENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee-CCcEEEEEec
Confidence 3667789999999999999974 689999999875432 24678899999999999999999999876 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++ |+|.+++..... ...++|.+..+++.|++.||+|||+. +|+||||||+||++++++++|++|||+++..
T Consensus 80 ~~-~~l~~~~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~ 150 (284)
T cd07836 80 MD-KDLKKYMDTHGV-----RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAF 150 (284)
T ss_pred CC-ccHHHHHHhcCC-----CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhh
Confidence 98 489988865331 13589999999999999999999987 8999999999999999999999999999865
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-21 Score=204.54 Aligned_cols=147 Identities=24% Similarity=0.382 Sum_probs=126.3
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
+.|...+.||+|+||.||+|+.. +|+.||+|++...... .+++.+|++++.+++||||+++.++|.+ ++..++|
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-~~~~~lv 93 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-EHTAWLV 93 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-CCeEEEE
Confidence 34677789999999999999964 6899999998643221 3578899999999999999999999986 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||++ |++.+++.... ..++|..+..++.|++.||.|||.. +|+||||+|+||++++++++||+|||++
T Consensus 94 ~e~~~-g~l~~~~~~~~-------~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~ 162 (307)
T cd06607 94 MEYCL-GSASDILEVHK-------KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSA 162 (307)
T ss_pred HHhhC-CCHHHHHHHcc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcc
Confidence 99997 67877775432 3589999999999999999999987 8999999999999999999999999998
Q ss_pred cccC
Q 035786 667 HAQG 670 (693)
Q Consensus 667 ~~~~ 670 (693)
+...
T Consensus 163 ~~~~ 166 (307)
T cd06607 163 SLVS 166 (307)
T ss_pred eecC
Confidence 8753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.5e-22 Score=204.92 Aligned_cols=145 Identities=22% Similarity=0.351 Sum_probs=125.0
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|...+.||+|+||.||+|+.. +|+.||+|++..... ..+.+.+|++++.+++|+||+++++++.+ +...++|+||
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 80 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS-DKKLTLVFEY 80 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc-CCceEEEEec
Confidence 556678999999999999974 689999999864322 23568889999999999999999998865 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++ |+|.++++... ..+++.....++.||++||.|||+. +|+||||||+||+++.++++||+|||+++..
T Consensus 81 ~~-~~l~~~~~~~~-------~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 149 (284)
T cd07839 81 CD-QDLKKYFDSCN-------GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAF 149 (284)
T ss_pred CC-CCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhcc
Confidence 97 58888876432 3489999999999999999999988 9999999999999999999999999999876
Q ss_pred C
Q 035786 670 G 670 (693)
Q Consensus 670 ~ 670 (693)
+
T Consensus 150 ~ 150 (284)
T cd07839 150 G 150 (284)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-21 Score=202.88 Aligned_cols=150 Identities=22% Similarity=0.267 Sum_probs=125.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCC-CCCccceeEEEEcCCC----ee
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVS-HARLVPLLGQCLEHET----EK 583 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~----~~ 583 (693)
+|+..+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++++.+++ |+||+++++++...+. ..
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 5777889999999999999974 689999998764322 2457889999999995 6999999998865322 26
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-CCceEECC
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-KFEVRLGS 662 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~-~~~~ki~D 662 (693)
++||||+++ +|.+++...... ....+++.+...++.||+.||+|||.. +|+||||||+||+++. ++.+||+|
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~d 154 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGRG---PGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIAD 154 (295)
T ss_pred EEEeeccCc-CHHHHHHHhccc---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEee
Confidence 899999985 899998753221 124589999999999999999999988 9999999999999998 89999999
Q ss_pred ccccccc
Q 035786 663 LSELHAQ 669 (693)
Q Consensus 663 fgla~~~ 669 (693)
||+++.+
T Consensus 155 fg~~~~~ 161 (295)
T cd07837 155 LGLGRAF 161 (295)
T ss_pred cccceec
Confidence 9998865
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-21 Score=203.68 Aligned_cols=146 Identities=23% Similarity=0.353 Sum_probs=128.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.+|...+.||+|+||.||+|.. .+++.||+|.+...... .+.|.+|+.++++++||||++++++|.. ++..++|+||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~lv~e~ 97 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV-GDELWVVMEY 97 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeee-CCcEEEEEec
Confidence 3466778899999999999985 46889999998643322 5678999999999999999999998875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.+++.+ ..+++.++..++.+++.|++|||+. +++||||||+||++++++.+||+|||++...
T Consensus 98 ~~~~~L~~~~~~---------~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~ 165 (293)
T cd06647 98 LAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 165 (293)
T ss_pred CCCCcHHHHHhh---------cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecc
Confidence 999999999864 2378999999999999999999988 9999999999999999999999999998765
Q ss_pred C
Q 035786 670 G 670 (693)
Q Consensus 670 ~ 670 (693)
.
T Consensus 166 ~ 166 (293)
T cd06647 166 T 166 (293)
T ss_pred c
Confidence 3
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-21 Score=199.24 Aligned_cols=145 Identities=23% Similarity=0.354 Sum_probs=128.2
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|...+.||+|+||.||+|... ++..||+|.+..... ..+++.+|++++++++|+||+++++++.. .+..++|+||
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~lv~e~ 80 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH-REKVYIFMEY 80 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec-CCEEEEEEec
Confidence 556788999999999999864 689999999875444 24678999999999999999999998865 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++++|.++++.. ..+++..+..++.++++|++|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 81 ~~~~~L~~~~~~~--------~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~ 149 (264)
T cd06626 81 CSGGTLEELLEHG--------RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKL 149 (264)
T ss_pred CCCCcHHHHHhhc--------CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccccccccc
Confidence 9999999999753 2378999999999999999999988 8999999999999999999999999998876
Q ss_pred C
Q 035786 670 G 670 (693)
Q Consensus 670 ~ 670 (693)
.
T Consensus 150 ~ 150 (264)
T cd06626 150 K 150 (264)
T ss_pred C
Confidence 3
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-21 Score=200.91 Aligned_cols=144 Identities=19% Similarity=0.336 Sum_probs=126.9
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc--cCHHHHHHHHHHHhcCC---CCCccceeEEEEcCCCeeEEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS--FKKESYMMELDLFSRVS---HARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~~lv~ 587 (693)
|+..+.||+|+||.||+|.. .+++.||||.+.... ...+++.+|++++++++ |||+++++++|.+ +...++||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-~~~~~lv~ 81 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-GPRLWIIM 81 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-CCEEEEEE
Confidence 56677899999999999996 568999999986532 22467889999999997 9999999998875 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++. ..++|.....++.+++.||+|||+. +|+||||+|+||++++++.++++|||++.
T Consensus 82 e~~~~~~L~~~~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06917 82 EYAEGGSVRTLMKA---------GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAA 149 (277)
T ss_pred ecCCCCcHHHHHHc---------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCcee
Confidence 99999999998864 2489999999999999999999988 99999999999999999999999999988
Q ss_pred ccC
Q 035786 668 AQG 670 (693)
Q Consensus 668 ~~~ 670 (693)
.+.
T Consensus 150 ~~~ 152 (277)
T cd06917 150 LLN 152 (277)
T ss_pred ecC
Confidence 763
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-21 Score=200.77 Aligned_cols=146 Identities=21% Similarity=0.376 Sum_probs=126.8
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
+|+..+.||+|+||.||+|.. .+++.||+|.+..... ..+++.+|++++++++|+|||++++++.+ .+..+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE-DSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc-CCeEE
Confidence 366778999999999999985 5689999999864321 13578999999999999999999999875 46789
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC-ceEECCc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF-EVRLGSL 663 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~-~~ki~Df 663 (693)
+||||+++|+|.+++.+. ..+++.....++.+++.||+|||+. +++||||||+||+++.++ .+||+||
T Consensus 80 ~v~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~df 148 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKY--------GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADF 148 (268)
T ss_pred EEEeccCCCcHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccc
Confidence 999999999999999753 2488999999999999999999998 999999999999998775 6999999
Q ss_pred ccccccC
Q 035786 664 SELHAQG 670 (693)
Q Consensus 664 gla~~~~ 670 (693)
|+++...
T Consensus 149 g~~~~~~ 155 (268)
T cd06630 149 GAAARLA 155 (268)
T ss_pred ccccccc
Confidence 9988763
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-21 Score=201.70 Aligned_cols=139 Identities=20% Similarity=0.199 Sum_probs=115.8
Q ss_pred ccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHH---hcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 519 LIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLF---SRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l---~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
+||+|+||.||++.. .+|+.||||.+...... .+.+.+|..++ ...+||||+.+.+++.. ++..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-PDKLCFILDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-CCeEEEEEecC
Confidence 489999999999996 45899999988653321 23345555443 34479999999888765 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++|+|.+++... ..++|.+...|+.|++.||+|||+. +|+||||||+||++++++.+|++|||+++..
T Consensus 80 ~~~~L~~~i~~~--------~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~ 147 (279)
T cd05633 80 NGGDLHYHLSQH--------GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (279)
T ss_pred CCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence 999999998643 2489999999999999999999988 8999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-21 Score=199.93 Aligned_cols=153 Identities=22% Similarity=0.343 Sum_probs=132.5
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCC-----Ce
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHE-----TE 582 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~-----~~ 582 (693)
++++|...+.||+|+||.||+|... +++.||+|.+.......++|.+|++++.++ +|+||++++++|.+.. ..
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 4567888899999999999999974 578999999876655567899999999999 7999999999986532 24
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||+++|+|.++++.... ....+++..+..++.|++.||.|||.. +|+||||+|+||++++++.+|++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLRK----KGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 7899999999999999875321 013589999999999999999999988 999999999999999999999999
Q ss_pred ccccccc
Q 035786 663 LSELHAQ 669 (693)
Q Consensus 663 fgla~~~ 669 (693)
||++...
T Consensus 157 ~~~~~~~ 163 (275)
T cd06608 157 FGVSAQL 163 (275)
T ss_pred Cccceec
Confidence 9998775
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-21 Score=208.58 Aligned_cols=146 Identities=22% Similarity=0.345 Sum_probs=125.3
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccc---ccCHHHHHHHHHHHhcC-CCCCccceeEEEEcC-CCeeE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLH---SFKKESYMMELDLFSRV-SHARLVPLLGQCLEH-ETEKL 584 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~---~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~-~~~~~ 584 (693)
.++|...+.||+|+||.||+|... +|+.||||++... ....+.+.+|++++.++ +|+||++++++|... ....+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 345777789999999999999975 6889999988542 12245678899999999 999999999988643 23579
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+||||++ ++|..+++.. .++|..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 86 lv~e~~~-~~L~~~~~~~---------~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g 152 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN---------ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFG 152 (337)
T ss_pred EEecccc-cCHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeecc
Confidence 9999997 5999888642 488999999999999999999987 99999999999999999999999999
Q ss_pred ccccc
Q 035786 665 ELHAQ 669 (693)
Q Consensus 665 la~~~ 669 (693)
+++..
T Consensus 153 ~~~~~ 157 (337)
T cd07852 153 LARSL 157 (337)
T ss_pred chhcc
Confidence 99876
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-24 Score=216.85 Aligned_cols=247 Identities=32% Similarity=0.475 Sum_probs=193.3
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 167 (693)
.+.+|..|..+++.+|.++ ++|+.++. +..++.|+.++|+++ .+|++++.+.+|+.|+.++|.+. .+|++++.+..
T Consensus 63 dl~nL~~l~vl~~~~n~l~-~lp~aig~-l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~ 138 (565)
T KOG0472|consen 63 DLKNLACLTVLNVHDNKLS-QLPAAIGE-LEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLD 138 (565)
T ss_pred hhhcccceeEEEeccchhh-hCCHHHHH-HHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhh
Confidence 5677888888888888876 56777775 888888888888887 67888888888888888888887 66777888888
Q ss_pred CCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 035786 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK 247 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 247 (693)
|+.|+..+|+++ .+|..+.++.+|..|++.+|.+....|. .-+++.|+.||...|-++ .+|++++.+.+|..|+|..
T Consensus 139 l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~-~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~ 215 (565)
T KOG0472|consen 139 LEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPEN-HIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRR 215 (565)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHH-HHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhh
Confidence 888888888887 6778888888888888888888754444 444888888888888775 6788888888888888888
Q ss_pred CcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccC
Q 035786 248 NSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSW 327 (693)
Q Consensus 248 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~ 327 (693)
|++. .+| +|.++..|++|+++.|++. .+|......+++|.+|||..|+++ ..|..+..+.+|.+||+|+|.|++ +
T Consensus 216 Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~-L 290 (565)
T KOG0472|consen 216 NKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS-L 290 (565)
T ss_pred cccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc-C
Confidence 8887 456 7888888888888888886 677777778888888888888887 577888888888888888888885 3
Q ss_pred CccCcCCCCCCcEEEccCCcc
Q 035786 328 PILSTNGNASGAVFNISNNML 348 (693)
Q Consensus 328 p~~~~~~~~~l~~l~ls~N~l 348 (693)
|. ..+++ .|+.|-+.+|.+
T Consensus 291 p~-sLgnl-hL~~L~leGNPl 309 (565)
T KOG0472|consen 291 PY-SLGNL-HLKFLALEGNPL 309 (565)
T ss_pred Cc-ccccc-eeeehhhcCCch
Confidence 42 34444 566666666665
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-21 Score=199.29 Aligned_cols=145 Identities=23% Similarity=0.425 Sum_probs=125.6
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCe
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----------KESYMMELDLFSRVSHARLVPLLGQCLEHETE 582 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 582 (693)
|.....||+|+||.||+|.. .+++.||+|.+...... .+.+.+|++++.+++||||+++++++.+ +..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 80 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD-ADH 80 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe-CCc
Confidence 34567899999999999986 45889999988543211 2468899999999999999999998875 467
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++|+||+++++|.+++... ..+++.....++.+++.|++|||+. +++||||||+||++++++.+||+|
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--------~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~d 149 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--------GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISD 149 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--------cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecc
Confidence 89999999999999999653 2488999999999999999999987 899999999999999999999999
Q ss_pred cccccccC
Q 035786 663 LSELHAQG 670 (693)
Q Consensus 663 fgla~~~~ 670 (693)
||+++...
T Consensus 150 fg~~~~~~ 157 (267)
T cd06628 150 FGISKKLE 157 (267)
T ss_pred cCCCcccc
Confidence 99988764
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-21 Score=214.63 Aligned_cols=175 Identities=18% Similarity=0.310 Sum_probs=146.7
Q ss_pred HhCCCCccCccccCCeeeEEEEE-eCCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcC----CCee
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEH----ETEK 583 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~----~~~~ 583 (693)
.+.-|....+||+|.+|.|||++ ..+|+.+|||++.......++...|.+++... +|||++.++|+++-. +++.
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL 96 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL 96 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence 34456777899999999999998 56799999999988877788899999999887 799999999998632 3578
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
|||||||.+||.-|++.... ...++|.....|..++.+|+.+||.+ .+||||||=.||||.+++++|+.||
T Consensus 97 WLVMEfC~gGSVTDLVKn~~------g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDF 167 (953)
T KOG0587|consen 97 WLVMEFCGGGSVTDLVKNTK------GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDF 167 (953)
T ss_pred EEEeeccCCccHHHHHhhhc------ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeee
Confidence 99999999999999997643 24699999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCC----CcceeeeeehhhhhhhhhcCC
Q 035786 664 SELHAQGDS----HQNVLTRFLWRQLYQSCMNGP 693 (693)
Q Consensus 664 gla~~~~~~----~~~~~~~~~~~~~y~a~~~~~ 693 (693)
|+.+.+..+ .+.+.|.++++|+.+||+-++
T Consensus 168 GvSaQldsT~grRnT~iGtP~WMAPEViac~e~~ 201 (953)
T KOG0587|consen 168 GVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESP 201 (953)
T ss_pred eeeeeeecccccccCcCCCcccccceeeecccCC
Confidence 998887433 333344455555556777543
|
|
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-21 Score=200.22 Aligned_cols=146 Identities=24% Similarity=0.329 Sum_probs=128.8
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|...+.||.|+||.||+|+.. +++.||+|.+..... ..+.+.+|++++++++|+||+++.+++.+ +...++|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~ 80 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK-GSKLWIIMEY 80 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE-CCeEEEEEEe
Confidence 4566778999999999999964 689999999865432 24578999999999999999999998875 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.++++.. .+++.+...++.|++.|+.|||+. +|+||||||+||+++++++++++|||+++..
T Consensus 81 ~~~~~L~~~~~~~---------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 148 (274)
T cd06609 81 CGGGSCLDLLKPG---------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQL 148 (274)
T ss_pred eCCCcHHHHHhhc---------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceee
Confidence 9999999998742 489999999999999999999987 8999999999999999999999999999887
Q ss_pred CC
Q 035786 670 GD 671 (693)
Q Consensus 670 ~~ 671 (693)
..
T Consensus 149 ~~ 150 (274)
T cd06609 149 TS 150 (274)
T ss_pred cc
Confidence 43
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-21 Score=208.27 Aligned_cols=147 Identities=20% Similarity=0.317 Sum_probs=125.6
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCC----Cee
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHE----TEK 583 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~ 583 (693)
+++|...+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|++++.+++|+||+++++++.... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 35688889999999999999985 5689999999864322 2456889999999999999999999875432 247
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++|+||+++ +|.+++.. ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 84 ~lv~e~~~~-~l~~~~~~---------~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~df 150 (336)
T cd07849 84 YIVQELMET-DLYKLIKT---------QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDF 150 (336)
T ss_pred EEEehhccc-CHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcc
Confidence 899999974 88877753 3489999999999999999999998 9999999999999999999999999
Q ss_pred ccccccC
Q 035786 664 SELHAQG 670 (693)
Q Consensus 664 gla~~~~ 670 (693)
|+++...
T Consensus 151 g~~~~~~ 157 (336)
T cd07849 151 GLARIAD 157 (336)
T ss_pred cceeecc
Confidence 9998763
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.2e-21 Score=203.96 Aligned_cols=147 Identities=24% Similarity=0.303 Sum_probs=128.9
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+|... +++.||+|.+...... .+.+.+|++++.+++|+||+++++++.+ +...++||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT-ETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec-CCEEEEEE
Confidence 5777889999999999999975 4899999998754322 3568899999999999999999998865 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++.... ..+++.....++.+++.||+|||.. +++||||||+||+++.++.++++|||++.
T Consensus 81 e~~~~~~L~~~~~~~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~ 151 (316)
T cd05574 81 DYCPGGELFRLLQRQPG------KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSK 151 (316)
T ss_pred EecCCCCHHHHHHhCCC------CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhh
Confidence 99999999999874321 3589999999999999999999987 89999999999999999999999999987
Q ss_pred cc
Q 035786 668 AQ 669 (693)
Q Consensus 668 ~~ 669 (693)
..
T Consensus 152 ~~ 153 (316)
T cd05574 152 QS 153 (316)
T ss_pred cc
Confidence 65
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-21 Score=200.85 Aligned_cols=149 Identities=24% Similarity=0.367 Sum_probs=132.3
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
.++.|...+.||+|+||.||+|... ++..||+|++.......+.+.+|++++.+++|+|++++++++.. +...++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLV-GDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEE-CCEEEEEEe
Confidence 4455677788999999999999986 68899999997654446679999999999999999999998876 468999999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++++|.+++.... ..+++..+..++.+++.||+|||.. +|+|+||||+||+++.++++||+|||++..
T Consensus 96 ~~~~~~L~~~l~~~~-------~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~ 165 (286)
T cd06614 96 YMDGGSLTDIITQNF-------VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQ 165 (286)
T ss_pred ccCCCcHHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhh
Confidence 999999999997532 2599999999999999999999987 999999999999999999999999999876
Q ss_pred c
Q 035786 669 Q 669 (693)
Q Consensus 669 ~ 669 (693)
.
T Consensus 166 ~ 166 (286)
T cd06614 166 L 166 (286)
T ss_pred h
Confidence 5
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.9e-21 Score=197.16 Aligned_cols=147 Identities=22% Similarity=0.365 Sum_probs=129.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
++|...+.||+|+||.||+|... +++.+|+|.+..... ..+.+.+|++++++++||||+++++++.+ ++..+++|||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~l~~e~ 81 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLR-RDKLWIVMEY 81 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEe-CCEEEEEEeC
Confidence 45777789999999999999864 578999999875433 35679999999999999999999998875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++++|.+++.... ..++..+...++.+++.|++|||.. +|+||||||+||++++++.+||+|||++...
T Consensus 82 ~~~~~l~~~~~~~~-------~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 151 (262)
T cd06613 82 CGGGSLQDIYQVTR-------GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQL 151 (262)
T ss_pred CCCCcHHHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhh
Confidence 99999999987532 3488999999999999999999988 8999999999999999999999999998775
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-21 Score=196.98 Aligned_cols=148 Identities=20% Similarity=0.350 Sum_probs=127.3
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|...+.||+|+||.||++.. .+++.||||++..... ..+.+.+|++++++++||||+++++.+.. ++..++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~ 80 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE-DKALMIVMEY 80 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec-CCEEEEEEec
Confidence 66678999999999999986 4688999999865332 24679999999999999999999998764 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEECCcccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLGSLSELHA 668 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~Dfgla~~ 668 (693)
+++|+|.++++.... ..+++..+.+++.++++|++|||+. +|+||||||+||+++++ ..+|++|||+++.
T Consensus 81 ~~~~~L~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (256)
T cd08220 81 APGGTLAEYIQKRCN------SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKI 151 (256)
T ss_pred CCCCCHHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCcee
Confidence 999999999975321 3589999999999999999999988 99999999999999855 5689999999987
Q ss_pred cCC
Q 035786 669 QGD 671 (693)
Q Consensus 669 ~~~ 671 (693)
...
T Consensus 152 ~~~ 154 (256)
T cd08220 152 LSS 154 (256)
T ss_pred cCC
Confidence 643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-21 Score=200.46 Aligned_cols=140 Identities=24% Similarity=0.296 Sum_probs=122.2
Q ss_pred cccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 520 IKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 520 ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
||+|+||+||++.. .+|+.||+|.+..... ..+.|.+|++++.+++||||+++.+++.. ++..++||||+++|+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET-KDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec-CCeEEEEEecCCCCc
Confidence 69999999999985 4689999999865321 24567889999999999999999988764 467899999999999
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|.++++.... ..+++.++..++.+++.|+.|||.. +++||||||+||++++++.+|++|||+++..
T Consensus 80 L~~~l~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~ 145 (277)
T cd05577 80 LKYHIYNVGE------PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVEL 145 (277)
T ss_pred HHHHHHHcCc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhh
Confidence 9999975432 3589999999999999999999988 9999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.5e-22 Score=211.70 Aligned_cols=147 Identities=24% Similarity=0.412 Sum_probs=127.8
Q ss_pred cCccccCCeeeEEEEEeC--CCc--EEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 517 TNLIKKGHSGDLFKGTLA--GGT--TVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~--~g~--~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
.++||+|.||+|++|.|. +|+ .||||.+...... ..+|.+|+.+|-+++|+|+|+|+|...+ ...+||+|.+
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~--qp~mMV~ELa 192 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD--QPAMMVFELA 192 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc--chhhHHhhhc
Confidence 467999999999999985 454 5899999765544 5789999999999999999999999985 4678999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+.|||.+.|++... ..+--...+.+|.|||.||.||..+ ++|||||.++|+||-..-.+||+||||.|-++
T Consensus 193 plGSLldrLrka~~------~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKK------AILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALG 263 (1039)
T ss_pred ccchHHHHHhhccc------cceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccC
Confidence 99999999986221 3466778899999999999999988 99999999999999999999999999999985
Q ss_pred CCCc
Q 035786 671 DSHQ 674 (693)
Q Consensus 671 ~~~~ 674 (693)
...+
T Consensus 264 ~ned 267 (1039)
T KOG0199|consen 264 ENED 267 (1039)
T ss_pred CCCc
Confidence 5444
|
|
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-21 Score=201.36 Aligned_cols=150 Identities=24% Similarity=0.330 Sum_probs=128.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~lv~e 588 (693)
+|...+.||+|++|.||++... +++.||+|.+..... ..+++.+|++++++++||||++++++|.+. ....++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 4677889999999999999974 588999999875433 246799999999999999999999988643 235789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++.... ....+++.....++.+++.||+|||.. +++|+||+|+||+++++..++|+|||++..
T Consensus 82 ~~~~~~L~~~l~~~~~----~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~ 154 (287)
T cd06621 82 YCEGGSLDSIYKKVKK----RGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGE 154 (287)
T ss_pred ecCCCCHHHHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccc
Confidence 9999999998864221 123588899999999999999999988 999999999999999999999999999876
Q ss_pred c
Q 035786 669 Q 669 (693)
Q Consensus 669 ~ 669 (693)
.
T Consensus 155 ~ 155 (287)
T cd06621 155 L 155 (287)
T ss_pred c
Confidence 5
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.7e-21 Score=196.68 Aligned_cols=146 Identities=25% Similarity=0.380 Sum_probs=130.7
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|...+.||+|+||.||+|+.. +++.||||++..... ..++|.+|++.+.+++|+||+++++++.. ++..++|+||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~ 80 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYK-EGEISIVLEY 80 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcc-CCeEEEEEEe
Confidence 5677889999999999999976 589999999876543 35689999999999999999999998875 4689999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc-CCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH-ECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~-~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
+++|+|.+++... ..+++..+.+++.++++|++|||. . +++||||+|+||++++++.++++|||+++.
T Consensus 81 ~~~~~L~~~l~~~--------~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~ 149 (264)
T cd06623 81 MDGGSLADLLKKV--------GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKV 149 (264)
T ss_pred cCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcccee
Confidence 9999999999753 348999999999999999999998 7 999999999999999999999999999987
Q ss_pred cC
Q 035786 669 QG 670 (693)
Q Consensus 669 ~~ 670 (693)
..
T Consensus 150 ~~ 151 (264)
T cd06623 150 LE 151 (264)
T ss_pred cc
Confidence 63
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-21 Score=202.95 Aligned_cols=150 Identities=25% Similarity=0.378 Sum_probs=127.8
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLL 585 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~l 585 (693)
..+|...+.||+|+||.||+|+.. +|+.||+|++...... ...+.+|++++.+++|+||+++++++.+.. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 346888899999999999999974 6899999998643222 335678999999999999999999886532 45799
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||++ ++|.+++.... ..++|.++..++.|+++|++|||+. +++||||||+||++++++.+||+|||+
T Consensus 86 v~e~~~-~~l~~~l~~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~ 154 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP-------TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGL 154 (309)
T ss_pred EEecCC-CCHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccce
Confidence 999997 58988886532 3589999999999999999999998 899999999999999999999999999
Q ss_pred ccccCC
Q 035786 666 LHAQGD 671 (693)
Q Consensus 666 a~~~~~ 671 (693)
++....
T Consensus 155 ~~~~~~ 160 (309)
T cd07845 155 ARTYGL 160 (309)
T ss_pred eeecCC
Confidence 988643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-21 Score=206.78 Aligned_cols=155 Identities=19% Similarity=0.272 Sum_probs=131.2
Q ss_pred CHHHHHHHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEc
Q 035786 503 TYEQLLRATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLE 578 (693)
Q Consensus 503 ~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~ 578 (693)
..+++..++++|...+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++.+++||||+++.+++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 4456667888999999999999999999985 5789999999865322 24568899999999999999999998753
Q ss_pred CC-----CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC
Q 035786 579 HE-----TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD 653 (693)
Q Consensus 579 ~~-----~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld 653 (693)
.. ...++++||+ +++|.+++.. ..++|.++..++.|+++||+|||+. +|+||||||+||+++
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~ 154 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKC---------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN 154 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEc
Confidence 21 2367888887 7899888753 2489999999999999999999988 999999999999999
Q ss_pred CCCceEECCcccccccC
Q 035786 654 DKFEVRLGSLSELHAQG 670 (693)
Q Consensus 654 ~~~~~ki~Dfgla~~~~ 670 (693)
+++.+||+|||+++...
T Consensus 155 ~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 155 EDCELKILDFGLARHTD 171 (345)
T ss_pred CCCCEEEeccccccccc
Confidence 99999999999988763
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-24 Score=217.59 Aligned_cols=264 Identities=28% Similarity=0.412 Sum_probs=227.9
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
.-|+.+.+++|.+...-++ +. +|..|.+|++++|+++ ..|++++.+..++.|+.++|++. .+|+.++.+.+|..|+
T Consensus 45 v~l~~lils~N~l~~l~~d-l~-nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~ 120 (565)
T KOG0472|consen 45 VDLQKLILSHNDLEVLRED-LK-NLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLD 120 (565)
T ss_pred cchhhhhhccCchhhccHh-hh-cccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhh
Confidence 4456677888887755554 33 5999999999999998 67889999999999999999998 7899999999999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 252 (693)
.++|.+. .+|++++.+..|+.|+..+|+++ .+|+.++++.+|..|++.+|++....|..+ +++.|++||...|.++
T Consensus 121 ~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~- 196 (565)
T KOG0472|consen 121 CSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLLE- 196 (565)
T ss_pred cccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhhhh-
Confidence 9999998 78889999999999999999998 688899999999999999999996555544 5999999999999986
Q ss_pred cCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCccccc-CCCCCCEEEccCCcCcccCCccC
Q 035786 253 SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF-LRPNLRFLDLSRNNITGSWPILS 331 (693)
Q Consensus 253 ~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~-~~~~L~~L~Ls~N~l~g~~p~~~ 331 (693)
.+|+.++.+.+|..|+|..|++. .+|+ |+.++.|.+|+++.|+++ .+|.... .++++.+|||..|+++ +.|. .
T Consensus 197 tlP~~lg~l~~L~~LyL~~Nki~-~lPe--f~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pd-e 270 (565)
T KOG0472|consen 197 TLPPELGGLESLELLYLRRNKIR-FLPE--FPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPD-E 270 (565)
T ss_pred cCChhhcchhhhHHHHhhhcccc-cCCC--CCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCch-H
Confidence 78999999999999999999998 6674 789999999999999998 5566555 8999999999999998 6774 4
Q ss_pred cCCCCCCcEEEccCCccceecCC-CCCCCCCEEEccCCcce
Q 035786 332 TNGNASGAVFNISNNMLYGDLNS-SSFRKFSLIDLSSNYFQ 371 (693)
Q Consensus 332 ~~~~~~l~~l~ls~N~l~g~~~~-~~~~~l~~ldLs~N~l~ 371 (693)
...+.+|..||+|+|.+++-.+. +++ .|+.|-+-+|.+.
T Consensus 271 ~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 271 ICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred HHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCchH
Confidence 45677889999999999987665 666 7888888888763
|
|
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-21 Score=198.31 Aligned_cols=148 Identities=21% Similarity=0.352 Sum_probs=127.7
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|...+.||+|+||.||+|... +|..||+|.+.... ...+.+.+|++++++++|+||++++++|.+ +...++|+||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e~ 80 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE-NGRLFIVMEY 80 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc-CCeEEEEEec
Confidence 566788999999999999975 58899999986532 234578899999999999999999998865 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC-ceEECCcccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF-EVRLGSLSELHA 668 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~-~~ki~Dfgla~~ 668 (693)
+++++|.+++.+... ..++|..+..++.+++.|++|||+. +|+|+||||+||+++++. .+|++|||.+..
T Consensus 81 ~~~~~L~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (257)
T cd08225 81 CDGGDLMKRINRQRG------VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQ 151 (257)
T ss_pred CCCCcHHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchh
Confidence 999999999975321 3489999999999999999999988 899999999999999885 579999999887
Q ss_pred cCC
Q 035786 669 QGD 671 (693)
Q Consensus 669 ~~~ 671 (693)
...
T Consensus 152 ~~~ 154 (257)
T cd08225 152 LND 154 (257)
T ss_pred ccC
Confidence 643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-23 Score=200.35 Aligned_cols=164 Identities=22% Similarity=0.358 Sum_probs=132.1
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--C-HHHHHHHHHHHhcCCCCCccceeEEEEcCC-------Ce
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--K-KESYMMELDLFSRVSHARLVPLLGQCLEHE-------TE 582 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-------~~ 582 (693)
|....+||+|.||.||||+-. .|+.||+|++-.... . ...-.+|++++..++|+|++.++..|.... ..
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 344567999999999999864 578899998743221 1 456788999999999999999998885321 23
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.|||+++++. +|.-.|.... ..++..+..+++.++..||.|+|.. .|+|||+||.|||++.++..|++|
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~~-------vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNRK-------VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCcc-------ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeec
Confidence 7899999987 8888875432 4588889999999999999999998 999999999999999999999999
Q ss_pred cccccccC---CCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQG---DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~---~~~~~~~~~~~~~~~y~a 688 (693)
||+||... .......|-.+.|.||+.
T Consensus 168 FGlar~fs~~~n~~kprytnrvvTLwYrp 196 (376)
T KOG0669|consen 168 FGLARAFSTSKNVVKPRYTNRVVTLWYRP 196 (376)
T ss_pred cccccceecccccCCCCcccceeeeecCC
Confidence 99998762 233334566778888863
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.9e-21 Score=199.60 Aligned_cols=143 Identities=22% Similarity=0.347 Sum_probs=126.1
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
|...+.||+|++|.||+|.. .+++.||+|++...... .+.+.+|+.++.+++|+||+++++++.. ++..++|+||++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~-~~~~~~v~e~~~ 99 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLV-GDELWVVMEFLE 99 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEc-CCeEEEEEeccC
Confidence 44567899999999999985 46889999998654332 4568899999999999999999998875 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|.+++.. ..+++.++..++.+++.|++|||+. +|+||||||+||++++++.++++|||+++..
T Consensus 100 ~~~L~~~~~~---------~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~ 165 (285)
T cd06648 100 GGALTDIVTH---------TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQV 165 (285)
T ss_pred CCCHHHHHHh---------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhh
Confidence 9999999864 2388999999999999999999988 8999999999999999999999999998765
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.4e-21 Score=200.27 Aligned_cols=147 Identities=22% Similarity=0.340 Sum_probs=126.6
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~lv~e 588 (693)
|...+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++.+++|+|++++.+++.+. ....++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 345678999999999999975 58999999997642 2245789999999999999999999998754 257899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++ +|.+++.... ..+++.++..++.+++.||+|||+. +++|+||||+||++++++.+|++|||+++.
T Consensus 81 ~~~~-~l~~~~~~~~-------~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~ 149 (287)
T cd07840 81 YMDH-DLTGLLDSPE-------VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARP 149 (287)
T ss_pred cccc-cHHHHHhccC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceee
Confidence 9984 8988886432 3589999999999999999999988 899999999999999999999999999988
Q ss_pred cCC
Q 035786 669 QGD 671 (693)
Q Consensus 669 ~~~ 671 (693)
...
T Consensus 150 ~~~ 152 (287)
T cd07840 150 YTK 152 (287)
T ss_pred ccC
Confidence 743
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-21 Score=208.22 Aligned_cols=146 Identities=20% Similarity=0.302 Sum_probs=125.5
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcC---CCeeE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEH---ETEKL 584 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~---~~~~~ 584 (693)
.+|+..+.||+|+||.||+|.. .+|+.||+|++..... ..+.+.+|++++.+++||||+++.+++... ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 5677788999999999999986 4689999999875322 245688899999999999999999877532 23578
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+||||+. |+|.++++.. ..+++.....++.+++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 85 lv~e~~~-~~l~~~~~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 85 VVMDLME-SDLHHIIHSD--------QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred EEEehhh-hhHHHHhccC--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccc
Confidence 9999996 6999988642 2489999999999999999999987 89999999999999999999999999
Q ss_pred ccccc
Q 035786 665 ELHAQ 669 (693)
Q Consensus 665 la~~~ 669 (693)
+++..
T Consensus 153 ~~~~~ 157 (334)
T cd07855 153 MARGL 157 (334)
T ss_pred cceee
Confidence 99876
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=4e-21 Score=197.36 Aligned_cols=140 Identities=19% Similarity=0.230 Sum_probs=123.7
Q ss_pred cccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 520 IKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 520 ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
||+|+||.||+|+.. +++.||+|.+..... ..+.+.+|++++++++||||+++++++.+ +...++|+||+++|+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD-KKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc-CCccEEEEecCCCCc
Confidence 699999999999975 488999999865332 24679999999999999999999998875 467899999999999
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
|.+++++. ..+++..+..++.+++.||+|||+. +++|+||||+||+++.++.+|++|||+++....
T Consensus 80 L~~~l~~~--------~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~ 145 (262)
T cd05572 80 LWTILRDR--------GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS 145 (262)
T ss_pred HHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence 99999753 2388999999999999999999987 999999999999999999999999999988743
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.8e-22 Score=221.34 Aligned_cols=170 Identities=15% Similarity=0.129 Sum_probs=124.8
Q ss_pred hCCCCccCccccCCeeeEEEEEeCC--CcEEEEE------------------EecccccCHHHHHHHHHHHhcCCCCCcc
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAG--GTTVVVK------------------KVSLHSFKKESYMMELDLFSRVSHARLV 570 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~--g~~vavK------------------~l~~~~~~~~~f~~Ei~~l~~l~H~niv 570 (693)
.++|...+.||+|+||+||++.... +..+++| ++.......+.|.+|++++.+++|+|||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 4578889999999999999987532 2223322 1111111234688999999999999999
Q ss_pred ceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCe
Q 035786 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSI 650 (693)
Q Consensus 571 ~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NI 650 (693)
++++++.+ ++..++|+||+. ++|.+++....... .......+..+|+.|++.||+|||.. +||||||||+||
T Consensus 227 ~l~~~~~~-~~~~~lv~e~~~-~~l~~~l~~~~~~~---~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NI 298 (501)
T PHA03210 227 KIEEILRS-EANTYMITQKYD-FDLYSFMYDEAFDW---KDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENI 298 (501)
T ss_pred cEeEEEEE-CCeeEEEEeccc-cCHHHHHhhccccc---cccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence 99998875 467899999985 57888776432100 11133455668999999999999988 999999999999
Q ss_pred eeCCCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 651 LLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 651 Lld~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+++++.+||+|||+++.+...........+||..|+|
T Consensus 299 Ll~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~a 336 (501)
T PHA03210 299 FLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNS 336 (501)
T ss_pred EECCCCCEEEEeCCCceecCcccccccccccCCcCCCC
Confidence 99999999999999998875433322333456666654
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.8e-21 Score=195.82 Aligned_cols=167 Identities=20% Similarity=0.320 Sum_probs=137.3
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|+..+.||+|+||.||+|.. .++..||+|++..... ..+.+.+|+++++.++|+||+++++.+.. ++..++|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~iv~e~ 80 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV-GDELWLVMPY 80 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee-CCEEEEEEec
Confidence 577788999999999999996 4688999999865332 35679999999999999999999998875 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.++++.... ...++|.....++.+++.|++|||+. +|+||||||+||++++++.+|++|||++..+
T Consensus 81 ~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~ 152 (267)
T cd06610 81 LSGGSLLDIMKSSYP-----RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASL 152 (267)
T ss_pred cCCCcHHHHHHHhcc-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHh
Confidence 999999999975321 13589999999999999999999988 9999999999999999999999999999887
Q ss_pred CCCCcc---eeeeeehhhhhhh
Q 035786 670 GDSHQN---VLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~---~~~~~~~~~~y~a 688 (693)
...... .....+++..|+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~~ 174 (267)
T cd06610 153 ADGGDRTRKVRKTFVGTPCWMA 174 (267)
T ss_pred ccCccccccccccccCChhhcC
Confidence 433221 1222345555553
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.8e-21 Score=201.26 Aligned_cols=146 Identities=25% Similarity=0.419 Sum_probs=125.7
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
|...+.||+|+||.||+|+. .+|..||+|++...... .+++.+|++++++++|+|+|+++++|.+ +...++|||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 105 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-EHTAWLVME 105 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-CCeEEEEEe
Confidence 66678899999999999996 46899999998643222 3468899999999999999999999875 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|++ |+|.+++.... ..++|.++..++.+++.|+.|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 106 ~~~-g~l~~~~~~~~-------~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~ 174 (317)
T cd06635 106 YCL-GSASDLLEVHK-------KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASI 174 (317)
T ss_pred CCC-CCHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccc
Confidence 997 58888775422 3589999999999999999999988 899999999999999999999999999887
Q ss_pred cCC
Q 035786 669 QGD 671 (693)
Q Consensus 669 ~~~ 671 (693)
...
T Consensus 175 ~~~ 177 (317)
T cd06635 175 ASP 177 (317)
T ss_pred cCC
Confidence 644
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-21 Score=199.08 Aligned_cols=145 Identities=21% Similarity=0.240 Sum_probs=127.7
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
|...+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++||||+++++++.+ +...++|+|
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 80 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD-EENMYLVVD 80 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC-CCeEEEEEe
Confidence 666789999999999999975 58999999986532 224679999999999999999999987754 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++++|.+++... ..+++.+...++.++++||.|||.. +++|+||||+||++++++.++++|||++..
T Consensus 81 ~~~~~~L~~~l~~~--------~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~ 149 (258)
T cd05578 81 LLLGGDLRYHLSQK--------VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATK 149 (258)
T ss_pred CCCCCCHHHHHHhc--------CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccc
Confidence 99999999999653 2588999999999999999999988 899999999999999999999999999887
Q ss_pred cC
Q 035786 669 QG 670 (693)
Q Consensus 669 ~~ 670 (693)
..
T Consensus 150 ~~ 151 (258)
T cd05578 150 VT 151 (258)
T ss_pred cC
Confidence 63
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.2e-21 Score=199.57 Aligned_cols=145 Identities=22% Similarity=0.352 Sum_probs=126.1
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|+..+.||+|++|.||+|.. .+|..||||++..... ..+.|.+|++++++++|||++++++++.+ ++..++||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~-~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS-ENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc-CCeEEEEEec
Confidence 34567899999999999986 4799999999865432 23578899999999999999999999875 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++ ++|.+++..... ..++|.++.+++.++++||+|||+. +++||||+|+||++++++.+|++|||+++..
T Consensus 80 ~~-~~l~~~~~~~~~------~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~ 149 (283)
T cd07835 80 LD-LDLKKYMDSSPL------TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAF 149 (283)
T ss_pred cC-cCHHHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccccc
Confidence 95 799999875331 3589999999999999999999987 8999999999999999999999999998865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.7e-23 Score=196.41 Aligned_cols=161 Identities=19% Similarity=0.247 Sum_probs=131.9
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|+..++||+|.|..||+... +.|+.+|+|.++.... ..++..+|+++-..++|||||+|..-+.+ +...|||+|+
T Consensus 13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~-~~~~ylvFe~ 91 (355)
T KOG0033|consen 13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLVFDL 91 (355)
T ss_pred hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcc-cceeEEEEec
Confidence 44556899999999999974 6799999998865332 35778899999999999999999986653 5789999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC---CceEECCcccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK---FEVRLGSLSEL 666 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~---~~~ki~Dfgla 666 (693)
|.+|+|..-+-.. ...+....-.++.||.++|.|.|.+ +|||||+||.|+||-+. --+|++|||+|
T Consensus 92 m~G~dl~~eIV~R--------~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvA 160 (355)
T KOG0033|consen 92 VTGGELFEDIVAR--------EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLA 160 (355)
T ss_pred ccchHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceE
Confidence 9999997665432 2355666677899999999999999 99999999999999743 35899999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
..+++... .-.++|||.|||
T Consensus 161 i~l~~g~~--~~G~~GtP~fma 180 (355)
T KOG0033|consen 161 IEVNDGEA--WHGFAGTPGYLS 180 (355)
T ss_pred EEeCCccc--cccccCCCcccC
Confidence 99974333 556889999987
|
|
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.7e-21 Score=199.35 Aligned_cols=148 Identities=21% Similarity=0.342 Sum_probs=124.2
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+.. +|+.||||++..... ..+.+.+|++++++++|+||+++++++.+ +...++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-EKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec-CCeEEEEE
Confidence 35777889999999999999974 689999999864322 24578899999999999999999999875 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-CCceEECCcccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-KFEVRLGSLSEL 666 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~-~~~~ki~Dfgla 666 (693)
||++ ++|.+++..... ..+++.....++.+++.||+|||+. +|+||||||+||++++ +..+||+|||++
T Consensus 81 e~~~-~~l~~~~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~ 150 (294)
T PLN00009 81 EYLD-LDLKKHMDSSPD------FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLA 150 (294)
T ss_pred eccc-ccHHHHHHhCCC------CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccc
Confidence 9996 588888754321 2367888889999999999999988 8999999999999985 567999999999
Q ss_pred cccC
Q 035786 667 HAQG 670 (693)
Q Consensus 667 ~~~~ 670 (693)
+..+
T Consensus 151 ~~~~ 154 (294)
T PLN00009 151 RAFG 154 (294)
T ss_pred cccC
Confidence 8653
|
|
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-21 Score=198.34 Aligned_cols=138 Identities=26% Similarity=0.359 Sum_probs=122.7
Q ss_pred cccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 520 IKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 520 ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
||+|+||.||+++.. +|+.||+|.+..... ..+.+.+|++++.+++|+||+++.+.+.+ +...++||||+++|+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG-KKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec-CcEEEEEEecCCCCc
Confidence 689999999999986 489999999865433 24578999999999999999999987764 567899999999999
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|.+++++.. .+++..+.+++.|++.||+|||+. +++||||+|+||++++++.+|++|||+++..
T Consensus 80 L~~~l~~~~--------~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~ 143 (265)
T cd05579 80 LASLLENVG--------SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVG 143 (265)
T ss_pred HHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhc
Confidence 999997532 489999999999999999999988 8999999999999999999999999998875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-21 Score=207.65 Aligned_cols=161 Identities=19% Similarity=0.234 Sum_probs=130.9
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCCh
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDL 595 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL 595 (693)
-++|+|.||+||.|+.. +...+|||.+.....+ .+-...||.+-+.++|+|||+++|.|.+ ++..-+.||-+|+|||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se-nGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSE-NGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCC-CCeEEEEeecCCCCcH
Confidence 47999999999999954 4567999999754433 3446779999999999999999998865 4567799999999999
Q ss_pred hhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CCCceEECCcccccccCCCCc
Q 035786 596 ASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DKFEVRLGSLSELHAQGDSHQ 674 (693)
Q Consensus 596 ~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~~~~ki~Dfgla~~~~~~~~ 674 (693)
.++|+.+.+... =...+.--+..||.+||.|||++ .|||||||-.|||++ ..+..||+|||..|.+..-..
T Consensus 660 SsLLrskWGPlK-----DNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP 731 (1226)
T KOG4279|consen 660 SSLLRSKWGPLK-----DNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP 731 (1226)
T ss_pred HHHHHhccCCCc-----cchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCc
Confidence 999987653211 14556667899999999999999 999999999999998 468999999999888733322
Q ss_pred ceeeeeehhhhhhh
Q 035786 675 NVLTRFLWRQLYQS 688 (693)
Q Consensus 675 ~~~~~~~~~~~y~a 688 (693)
- ...+.||..|||
T Consensus 732 ~-TETFTGTLQYMA 744 (1226)
T KOG4279|consen 732 C-TETFTGTLQYMA 744 (1226)
T ss_pred c-ccccccchhhhC
Confidence 1 344789999998
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.4e-21 Score=216.81 Aligned_cols=255 Identities=25% Similarity=0.305 Sum_probs=153.9
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
..-..|+++.+.+. .+|+.+. ++|+.|++++|+++. +|.. +++|++|+|++|+|+. +|.. .++|+.|+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~ 268 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELS 268 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh---cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccCc-ccCc---ccccceee
Confidence 34567888888887 6887663 478888888888874 5542 5788888888888874 4543 35777888
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 252 (693)
|++|.++ .+|.. ..+|+.|++++|+++ .+|.. +++|+.|+|++|++++ +|... .+|+.|++++|++++
T Consensus 269 Ls~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~ 336 (788)
T PRK15387 269 IFSNPLT-HLPAL---PSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS 336 (788)
T ss_pred ccCCchh-hhhhc---hhhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCCc---ccccccccccCcccc
Confidence 8888776 34542 245677777777776 34542 3567777777777775 34322 345566666666653
Q ss_pred cCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCc
Q 035786 253 SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILST 332 (693)
Q Consensus 253 ~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~ 332 (693)
+|.. ..+|+.|+|++|+|++ +|.. ..+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++ +|..
T Consensus 337 -LP~l---p~~Lq~LdLS~N~Ls~-LP~l----p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l-- 400 (788)
T PRK15387 337 -LPTL---PSGLQELSVSDNQLAS-LPTL----PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL-- 400 (788)
T ss_pred -cccc---ccccceEecCCCccCC-CCCC----Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc--
Confidence 3421 1356666666666663 4431 2345566666666663 4432 2456666666666663 4421
Q ss_pred CCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcceeecCCCcC-----cccccCCCcCCCC
Q 035786 333 NGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRG-----RNVSLGRNCLQSV 392 (693)
Q Consensus 333 ~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g~ip~~~~-----~~~~l~~n~l~g~ 392 (693)
...|+.|++++|+|++ +|. ...+|+.|+|++|+++ .+|..+. ..+++++|.+++.
T Consensus 401 --~s~L~~LdLS~N~Lss-IP~-l~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 401 --PSELKELMVSGNRLTS-LPM-LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSER 460 (788)
T ss_pred --ccCCCEEEccCCcCCC-CCc-chhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCch
Confidence 2345666666666654 442 2334556666666665 4555433 2355566666554
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.8e-21 Score=196.94 Aligned_cols=150 Identities=17% Similarity=0.288 Sum_probs=124.5
Q ss_pred CCccCccccCCeeeEEEEEeCC--CcEEEEEEecccc--------c---CHHHHHHHHHHHhc-CCCCCccceeEEEEcC
Q 035786 514 FSETNLIKKGHSGDLFKGTLAG--GTTVVVKKVSLHS--------F---KKESYMMELDLFSR-VSHARLVPLLGQCLEH 579 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~--g~~vavK~l~~~~--------~---~~~~f~~Ei~~l~~-l~H~niv~l~g~~~~~ 579 (693)
|+..+.||+|+||.||+|...+ ++.||||.+.... . ..+++.+|++++.+ ++||||++++++|.+
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~- 80 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE- 80 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc-
Confidence 5667889999999999999754 6889999875321 0 12457789998875 799999999999876
Q ss_pred CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceE
Q 035786 580 ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 580 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~k 659 (693)
++..++||||+++++|.+++..... ....+++..+.+++.+++.||+|||+.. +|+||||||+||++++++.+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~ 154 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKE----KKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVT 154 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEE
Confidence 4688999999999999998864211 1135899999999999999999999631 799999999999999999999
Q ss_pred ECCcccccccC
Q 035786 660 LGSLSELHAQG 670 (693)
Q Consensus 660 i~Dfgla~~~~ 670 (693)
++|||+++...
T Consensus 155 l~dfg~~~~~~ 165 (269)
T cd08528 155 ITDFGLAKQKQ 165 (269)
T ss_pred Eecccceeecc
Confidence 99999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.7e-21 Score=197.80 Aligned_cols=146 Identities=24% Similarity=0.364 Sum_probs=128.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|+..+.||+|+||.||++... +++.||+|++..... ..+++.+|++++++++||||+++.++|.. ++..++|+||
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~ 80 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN-NGDISICMEY 80 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec-CCEEEEEEEe
Confidence 4566678999999999999975 689999999875432 35679999999999999999999999876 4789999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc-CCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH-ECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~-~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
+++++|.+++.... ..++.....+++.+++.|++|||. . +++||||||+||++++++.+||+|||.++.
T Consensus 81 ~~~~~L~~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~ 150 (265)
T cd06605 81 MDGGSLDKILKEVQ-------GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQ 150 (265)
T ss_pred cCCCcHHHHHHHcc-------CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchh
Confidence 99999999997532 358889999999999999999998 6 899999999999999999999999999876
Q ss_pred c
Q 035786 669 Q 669 (693)
Q Consensus 669 ~ 669 (693)
.
T Consensus 151 ~ 151 (265)
T cd06605 151 L 151 (265)
T ss_pred h
Confidence 5
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.6e-21 Score=199.90 Aligned_cols=140 Identities=23% Similarity=0.346 Sum_probs=123.7
Q ss_pred CccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCCh
Q 035786 518 NLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDL 595 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL 595 (693)
..||+|+||.||+|.. .+|+.||||++...... .+.+.+|+.++++++|+||+++++++.. ++..++||||+++++|
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L 104 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGAL 104 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEe-CCEEEEEEecCCCCcH
Confidence 4699999999999987 46899999998653332 5578999999999999999999998875 4688999999999999
Q ss_pred hhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 596 ASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 596 ~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
.+++.. ..++|.....++.+++.|++|||+. +|+||||||+||++++++.++|+|||++....
T Consensus 105 ~~~~~~---------~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~ 167 (292)
T cd06657 105 TDIVTH---------TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 167 (292)
T ss_pred HHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecc
Confidence 998753 2478999999999999999999988 89999999999999999999999999987663
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.2e-21 Score=204.35 Aligned_cols=148 Identities=18% Similarity=0.289 Sum_probs=125.8
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-----
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE----- 580 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----- 580 (693)
..++|+..+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++.+++||||+++.+++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 345688889999999999999985 57899999998643222 356889999999999999999999875432
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
...++||||+ +++|.+++.. ..+++.+...++.|+++||+|||.. +|+||||||+||++++++.+|+
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---------~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl 159 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---------EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKI 159 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEE
Confidence 1358999999 6799888753 2488999999999999999999988 8999999999999999999999
Q ss_pred CCcccccccC
Q 035786 661 GSLSELHAQG 670 (693)
Q Consensus 661 ~Dfgla~~~~ 670 (693)
+|||+++...
T Consensus 160 ~dfg~~~~~~ 169 (343)
T cd07880 160 LDFGLARQTD 169 (343)
T ss_pred eecccccccc
Confidence 9999998764
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.6e-21 Score=200.47 Aligned_cols=150 Identities=22% Similarity=0.304 Sum_probs=124.8
Q ss_pred CCccCccccCCeeeEEEEEeC---CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA---GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~---~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~l 585 (693)
|...+.||+|+||.||+|+.. +++.||||.+.... ...+.+.+|++++.+++||||++++++|.+.. ...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 556678999999999999964 47899999987632 12456888999999999999999999987541 46899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC----CCceEEC
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD----KFEVRLG 661 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~----~~~~ki~ 661 (693)
||||+++ +|.+++...... ....++......|+.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 82 v~e~~~~-~l~~~~~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~ 154 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQA---KRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIG 154 (316)
T ss_pred EEeCCCc-CHHHHHHhhccC---CCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEEC
Confidence 9999985 777777543211 113588899999999999999999988 8999999999999999 9999999
Q ss_pred CcccccccC
Q 035786 662 SLSELHAQG 670 (693)
Q Consensus 662 Dfgla~~~~ 670 (693)
|||+++...
T Consensus 155 Dfg~~~~~~ 163 (316)
T cd07842 155 DLGLARLFN 163 (316)
T ss_pred CCccccccC
Confidence 999998763
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-22 Score=227.85 Aligned_cols=166 Identities=23% Similarity=0.349 Sum_probs=134.9
Q ss_pred hCCCCccCccccCCeeeEEEEE-eCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
+-+....+.||.|.||.||-|. .++|+..|||.+.-.... .....+|+.++..++|||+|+++|.=.. ++..++.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH-Rekv~IF 1312 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH-REKVYIF 1312 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec-HHHHHHH
Confidence 3345667889999999999998 567999999987532222 3467789999999999999999998765 3578999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
||||++|+|.+.+...+- .+..--..+..|++.|++|||++ +||||||||.||+||.++-+|.+|||.|
T Consensus 1313 MEyC~~GsLa~ll~~gri--------~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa 1381 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRI--------EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSA 1381 (1509)
T ss_pred HHHhccCcHHHHHHhcch--------hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccce
Confidence 999999999999975432 33333344788999999999999 9999999999999999999999999999
Q ss_pred cccCCCCcc---eeeeeehhhhhhh
Q 035786 667 HAQGDSHQN---VLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~---~~~~~~~~~~y~a 688 (693)
+.+.....+ ....+.|||.|||
T Consensus 1382 ~ki~~~~~~~~~el~~~~GT~~YMA 1406 (1509)
T KOG4645|consen 1382 VKIKNNAQTMPGELQSMMGTPMYMA 1406 (1509)
T ss_pred eEecCchhcCCHHHHhhcCCchhcC
Confidence 988433222 2345789999998
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.6e-21 Score=197.79 Aligned_cols=144 Identities=17% Similarity=0.256 Sum_probs=121.5
Q ss_pred CccCccccCCeeeEEEEEe-CCCcEEEEEEecccc--cCHHHHHHHHHHHhcCC-CCCccceeEEEEcCC-CeeEEEEcc
Q 035786 515 SETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS--FKKESYMMELDLFSRVS-HARLVPLLGQCLEHE-TEKLLVYKY 589 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~-~~~~lv~ey 589 (693)
...+.||+|+||.||+|+. .+++.||+|++.... .......+|++++.++. |+|++++++++.+.. +..++|+||
T Consensus 2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~ 81 (282)
T cd07831 2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL 81 (282)
T ss_pred ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence 4457899999999999986 468999999986532 22334567999999995 999999999987531 568999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++ |+|.+++.... ..++|.++..++.+++.||+|||.. +|+||||||+||++++ +.+||+|||+++..
T Consensus 82 ~~-~~l~~~l~~~~-------~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~ 149 (282)
T cd07831 82 MD-MNLYELIKGRK-------RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGI 149 (282)
T ss_pred CC-ccHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccc
Confidence 97 68888886432 3589999999999999999999988 8999999999999999 99999999999876
Q ss_pred C
Q 035786 670 G 670 (693)
Q Consensus 670 ~ 670 (693)
.
T Consensus 150 ~ 150 (282)
T cd07831 150 Y 150 (282)
T ss_pred c
Confidence 3
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.2e-21 Score=197.16 Aligned_cols=139 Identities=21% Similarity=0.196 Sum_probs=115.5
Q ss_pred ccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHH---HHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 519 LIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELD---LFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~---~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
+||+|+||.||+|.. .+|+.||+|.+...... ...+..|.. .++..+||||+++.+++.+ ++..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-CCEEEEEEecC
Confidence 489999999999986 45889999998653221 223444543 4445689999999887764 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++|+|.+++... ..++|.++..++.|+++|++|||+. +|+||||||+||++++++.+|++|||+++..
T Consensus 80 ~g~~L~~~l~~~--------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~ 147 (278)
T cd05606 80 NGGDLHYHLSQH--------GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (278)
T ss_pred CCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence 999999988642 2489999999999999999999987 8999999999999999999999999998765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.3e-21 Score=204.23 Aligned_cols=145 Identities=19% Similarity=0.292 Sum_probs=123.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----Ce
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHE-----TE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~ 582 (693)
.+|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++.+++|+||++++++|.... ..
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 6788889999999999999996 4689999999864321 1356889999999999999999999875432 24
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++|+||+.. +|.++.. ..+++.....++.++++||+|||.. +|+||||||+||++++++.+|++|
T Consensus 95 ~~lv~e~~~~-~l~~~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~d 160 (342)
T cd07879 95 FYLVMPYMQT-DLQKIMG----------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILD 160 (342)
T ss_pred EEEEeccccc-CHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEee
Confidence 5899999974 7766542 2488999999999999999999988 899999999999999999999999
Q ss_pred cccccccC
Q 035786 663 LSELHAQG 670 (693)
Q Consensus 663 fgla~~~~ 670 (693)
||+++...
T Consensus 161 fg~~~~~~ 168 (342)
T cd07879 161 FGLARHAD 168 (342)
T ss_pred CCCCcCCC
Confidence 99998763
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-20 Score=191.80 Aligned_cols=146 Identities=25% Similarity=0.414 Sum_probs=129.3
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|+..+.||+|+||.||+|+.. +++.||||.+..... ..+.+.+|++++.+++|+|++++.+++.+ ++..++||||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~ 80 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET-SDSLYIILEY 80 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe-CCEEEEEEec
Confidence 556788999999999999864 588999999976543 24679999999999999999999998875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++++|.+++... ..++|..+..++.+++.|+.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~~~~~L~~~~~~~--------~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 149 (254)
T cd06627 81 AENGSLRQIIKKF--------GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKL 149 (254)
T ss_pred CCCCcHHHHHHhc--------cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceec
Confidence 9999999998653 2489999999999999999999988 9999999999999999999999999999887
Q ss_pred CC
Q 035786 670 GD 671 (693)
Q Consensus 670 ~~ 671 (693)
..
T Consensus 150 ~~ 151 (254)
T cd06627 150 ND 151 (254)
T ss_pred CC
Confidence 43
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.4e-21 Score=195.51 Aligned_cols=145 Identities=21% Similarity=0.231 Sum_probs=123.3
Q ss_pred CCccCccccCCeeeEEEEEeCC-CcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
|...+.+|+|.-|+||.+.+.+ +..+|+|.+++.... ......|-++|+.++||.++.|++.+- .++..+||||
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe-t~~~~cl~me 157 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE-TDKYSCLVME 157 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee-ccceeEEEEe
Confidence 3445679999999999999875 589999999865433 234567889999999999999999875 4678899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
||+||+|+..++++.. +.++.....-+|..|.-||+|||-. +||+|||||+||||.+++.+.++||-|...
T Consensus 158 yCpGGdL~~LrqkQp~------~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~ 228 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPG------KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLR 228 (459)
T ss_pred cCCCccHHHHHhhCCC------CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecccccc
Confidence 9999999999887543 4577777777899999999999988 999999999999999999999999977544
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.2e-21 Score=203.88 Aligned_cols=148 Identities=20% Similarity=0.282 Sum_probs=125.4
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHE----- 580 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----- 580 (693)
..+.|+..+.||+|+||.||+|.. .+|+.||||++..... ..+++.+|++++.+++|+||+++++++....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 345688889999999999999986 4689999999864321 2356888999999999999999999875322
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
...++||||++ |+|.+++.. .+++.+...++.|++.||+|||.. +|+||||||+||++++++.+||
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~----------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL 159 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM----------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKI 159 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh----------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEE
Confidence 24689999996 588887753 278888999999999999999998 9999999999999999999999
Q ss_pred CCcccccccCC
Q 035786 661 GSLSELHAQGD 671 (693)
Q Consensus 661 ~Dfgla~~~~~ 671 (693)
+|||+++....
T Consensus 160 ~Dfg~~~~~~~ 170 (353)
T cd07850 160 LDFGLARTAGT 170 (353)
T ss_pred ccCccceeCCC
Confidence 99999987643
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.4e-21 Score=199.43 Aligned_cols=144 Identities=20% Similarity=0.209 Sum_probs=123.5
Q ss_pred CCccCccccCCeeeEEEEEe----CCCcEEEEEEeccccc-----CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 514 FSETNLIKKGHSGDLFKGTL----AGGTTVVVKKVSLHSF-----KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~----~~g~~vavK~l~~~~~-----~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
|...+.||+|+||.||+++. .+++.||||.+..... ..+.+.+|++++.++ +|+||+++.+.+.. +...
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~-~~~~ 80 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT-DTKL 80 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec-CCEE
Confidence 55667899999999999984 3578899999864321 235688999999999 59999999987654 4678
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++||||+++|+|.+++... ..+++.....++.++++||+|||+. +++||||||+||+++++++++++||
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df 149 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--------EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDF 149 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--------CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEEC
Confidence 8999999999999998642 2488999999999999999999987 9999999999999999999999999
Q ss_pred cccccc
Q 035786 664 SELHAQ 669 (693)
Q Consensus 664 gla~~~ 669 (693)
|+++..
T Consensus 150 g~~~~~ 155 (288)
T cd05583 150 GLSKEF 155 (288)
T ss_pred cccccc
Confidence 998875
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.7e-21 Score=198.47 Aligned_cols=146 Identities=18% Similarity=0.305 Sum_probs=125.8
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|...+.||+|+||.||+|+.. +++.||||++...... .....+|++.+.+++ |+||+++++++.+ ++..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE-NDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc-CCcEEEEEec
Confidence 345678999999999999985 4789999998654332 334567999999999 9999999998876 5688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+ +|+|.++++.... ..++|.++..++.+++.||.|||+. +++|+||||+||++++++.+||+|||+++..
T Consensus 80 ~-~~~l~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~ 149 (283)
T cd07830 80 M-EGNLYQLMKDRKG------KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREI 149 (283)
T ss_pred C-CCCHHHHHHhccc------ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceec
Confidence 9 8899999875431 3589999999999999999999988 8999999999999999999999999999876
Q ss_pred C
Q 035786 670 G 670 (693)
Q Consensus 670 ~ 670 (693)
.
T Consensus 150 ~ 150 (283)
T cd07830 150 R 150 (283)
T ss_pred c
Confidence 3
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-20 Score=199.01 Aligned_cols=147 Identities=23% Similarity=0.361 Sum_probs=124.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-------
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE------- 580 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~------- 580 (693)
++|...+.||+|+||.||+|+.. +++.||||++...... ...+.+|++++++++||||++++++|...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 45778889999999999999964 6899999998643221 345678999999999999999999986532
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
...++||||++ ++|.+++.... ..+++.+...++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 160 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNKN-------VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKL 160 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEE
Confidence 23489999997 48888876432 2489999999999999999999988 8999999999999999999999
Q ss_pred CCccccccc
Q 035786 661 GSLSELHAQ 669 (693)
Q Consensus 661 ~Dfgla~~~ 669 (693)
+|||+++..
T Consensus 161 ~dfg~~~~~ 169 (310)
T cd07865 161 ADFGLARAF 169 (310)
T ss_pred CcCCCcccc
Confidence 999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.5e-21 Score=201.97 Aligned_cols=150 Identities=19% Similarity=0.295 Sum_probs=128.7
Q ss_pred HHHHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCe
Q 035786 507 LLRATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETE 582 (693)
Q Consensus 507 l~~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 582 (693)
+...+++|+..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++.+++|||||++.++|......
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 344677899999999999999999985 478999999885422 2246788999999999999999999988754567
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++|+||+ +++|.++++. ..+++.....++.+++.||+|||+. +|+||||||+||++++++.+|++|
T Consensus 85 ~~lv~e~~-~~~L~~~~~~---------~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~d 151 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTS---------RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICD 151 (328)
T ss_pred EEEEeehh-ccCHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCc
Confidence 89999998 5689888753 2377888889999999999999988 899999999999999999999999
Q ss_pred ccccccc
Q 035786 663 LSELHAQ 669 (693)
Q Consensus 663 fgla~~~ 669 (693)
||+++..
T Consensus 152 fg~~~~~ 158 (328)
T cd07856 152 FGLARIQ 158 (328)
T ss_pred ccccccc
Confidence 9998865
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.6e-21 Score=203.61 Aligned_cols=147 Identities=18% Similarity=0.304 Sum_probs=125.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCC----Cee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHE----TEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~ 583 (693)
+.|...+.||+|+||.||+|+. .+|+.||||++.... .....+.+|++++.+++|+||+++++++.... ...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 4577788999999999999985 468999999986432 22456788999999999999999999875432 247
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++||||+. ++|.+++... ..+++.....++.+++.||.|||+. +++||||||+||+++.++.+||+||
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Df 152 (337)
T cd07858 85 YIVYELMD-TDLHQIIRSS--------QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDF 152 (337)
T ss_pred EEEEeCCC-CCHHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcC
Confidence 99999996 7898888642 2489999999999999999999988 8999999999999999999999999
Q ss_pred ccccccC
Q 035786 664 SELHAQG 670 (693)
Q Consensus 664 gla~~~~ 670 (693)
|+++...
T Consensus 153 g~~~~~~ 159 (337)
T cd07858 153 GLARTTS 159 (337)
T ss_pred ccccccC
Confidence 9998763
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.7e-21 Score=216.84 Aligned_cols=155 Identities=25% Similarity=0.391 Sum_probs=130.2
Q ss_pred CCccCccccCCeeeEEEEEeC----C----CcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCe
Q 035786 514 FSETNLIKKGHSGDLFKGTLA----G----GTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHETE 582 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~----~----g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 582 (693)
+...+.+|+|.||.|++|.+. . ...||||.++..... .+.+..|+++|..+ +|+|||.++|+|.. +..
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~-~~~ 376 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ-DGP 376 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc-CCc
Confidence 344458999999999999852 1 357999999764433 67899999999999 69999999999986 578
Q ss_pred eEEEEccCCCCChhhhhhccC-CCC-CCC----C--CCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC
Q 035786 583 KLLVYKYMVCGDLASSLHRVT-DLE-DDS----L--QSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD 654 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~-~~~-~~~----~--~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~ 654 (693)
.++|.||++.|+|.+||+..+ ... +.. . ..++....+.+|.|||.||+||++. ++||||+.++|||+.+
T Consensus 377 ~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~ 453 (609)
T KOG0200|consen 377 LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITK 453 (609)
T ss_pred eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecC
Confidence 999999999999999998765 100 111 1 2489999999999999999999998 8999999999999999
Q ss_pred CCceEECCcccccccCCC
Q 035786 655 KFEVRLGSLSELHAQGDS 672 (693)
Q Consensus 655 ~~~~ki~Dfgla~~~~~~ 672 (693)
+..+||+|||+||.....
T Consensus 454 ~~~~kIaDFGlar~~~~~ 471 (609)
T KOG0200|consen 454 NKVIKIADFGLARDHYNK 471 (609)
T ss_pred CCEEEEccccceeccCCC
Confidence 999999999999976443
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-20 Score=189.46 Aligned_cols=147 Identities=29% Similarity=0.437 Sum_probs=130.5
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
|...+.||+|+||.||++... +++.|++|++..... ..+.+.+|++++++++|+|++++.+++.. +...++++||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~l~~e~~~ 80 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLK-KDELWIVMEFCS 80 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeEEEEEecCC
Confidence 566788999999999999975 689999999976544 45689999999999999999999998875 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+++|.+++.... ..++|..+..++.+++.|+.|||.. +++||||+|+||++++++.+||+|||.+.....
T Consensus 81 ~~~L~~~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 150 (253)
T cd05122 81 GGSLKDLLKSTN-------QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSD 150 (253)
T ss_pred CCcHHHHHhhcC-------CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccc
Confidence 999999987532 3589999999999999999999987 999999999999999999999999999888744
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-21 Score=221.73 Aligned_cols=149 Identities=23% Similarity=0.354 Sum_probs=116.4
Q ss_pred HHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCC----
Q 035786 509 RATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHET---- 581 (693)
Q Consensus 509 ~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~---- 581 (693)
|-.++|.+..++|+||||.|||++- -||..+||||+..... ......+|++++++++|||||+++..+.+...
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 4556788899999999999999984 4899999999976532 23567889999999999999988765443200
Q ss_pred --------------------------------------------------------------------------------
Q 035786 582 -------------------------------------------------------------------------------- 581 (693)
Q Consensus 582 -------------------------------------------------------------------------------- 581 (693)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ----------------------------------eeEEEEccCCCCChhhhhhccCCCCCCCCCCC-CHHHHHHHHHHHH
Q 035786 582 ----------------------------------EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSL-DWITRLKIAIGAA 626 (693)
Q Consensus 582 ----------------------------------~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l-~~~~r~~ia~~ia 626 (693)
-.|+-||||+.-.+++++++... . .-..-.++..+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~--------~~~~d~~wrLFreIl 707 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHF--------NSQRDEAWRLFREIL 707 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhccc--------chhhHHHHHHHHHHH
Confidence 01345666666666666554221 1 2333457889999
Q ss_pred HHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 627 EGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 627 ~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
.||+|+|.. +||||||||.||+||++..+||+|||+|..
T Consensus 708 EGLaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 708 EGLAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATD 746 (1351)
T ss_pred HHHHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchh
Confidence 999999998 899999999999999999999999999998
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.8e-21 Score=189.16 Aligned_cols=169 Identities=17% Similarity=0.271 Sum_probs=139.1
Q ss_pred CHHHHHHHhCCCCccCccccCCeeeEEEEE-eCCCcEEEEEEecccccC-HHHHHHHHHHHhcC-CCCCccceeEEEEcC
Q 035786 503 TYEQLLRATGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFK-KESYMMELDLFSRV-SHARLVPLLGQCLEH 579 (693)
Q Consensus 503 ~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~ 579 (693)
.|+|+-+-| .+++|+|+|+.|-.++ +.+|..+|||.+++.... +....+|++++... .|+||+.|+.|+-+
T Consensus 74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd- 147 (463)
T KOG0607|consen 74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED- 147 (463)
T ss_pred hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc-
Confidence 577877777 3689999999999887 678999999999875444 66788999999998 59999999998754
Q ss_pred CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC---C
Q 035786 580 ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK---F 656 (693)
Q Consensus 580 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~---~ 656 (693)
+...|||||-|.+|.|..+|+.+. .++..+.-++..+||.||.|||.. +|.|||+||+|||-.+. .
T Consensus 148 d~~FYLVfEKm~GGplLshI~~~~--------~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vs 216 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQKRK--------HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVS 216 (463)
T ss_pred cceEEEEEecccCchHHHHHHHhh--------hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcC
Confidence 578899999999999999998754 377788889999999999999998 99999999999998654 3
Q ss_pred ceEECCcccccccCCC------Ccceeeeeehhhhhhh
Q 035786 657 EVRLGSLSELHAQGDS------HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 657 ~~ki~Dfgla~~~~~~------~~~~~~~~~~~~~y~a 688 (693)
-+||+||-++...... ........+|+-+|||
T Consensus 217 PvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMA 254 (463)
T KOG0607|consen 217 PVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMA 254 (463)
T ss_pred ceeeeccccccccccCCCCCCCCCccccCcccchhhcc
Confidence 5899999887665111 1112444789999997
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-20 Score=189.62 Aligned_cols=151 Identities=20% Similarity=0.353 Sum_probs=130.9
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|...+.||+|+||.||++... ++..||+|++..... ..+++.+|++++++++|+|++++.+.+... ...++|+||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-~~~~lv~e~ 80 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK-GKLCIVMEY 80 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-CEEEEEEEe
Confidence 566788999999999999975 688999999875433 246788999999999999999999988754 688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++++|.++++.... ....+++.++..++.+++.||+|||.. +++|+||+|+||++++++.++|+|||++...
T Consensus 81 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 153 (258)
T cd08215 81 ADGGDLSQKIKKQKK----EGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVL 153 (258)
T ss_pred cCCCcHHHHHHHhhc----cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeec
Confidence 999999999976421 114589999999999999999999998 9999999999999999999999999999886
Q ss_pred CCC
Q 035786 670 GDS 672 (693)
Q Consensus 670 ~~~ 672 (693)
...
T Consensus 154 ~~~ 156 (258)
T cd08215 154 SST 156 (258)
T ss_pred ccC
Confidence 443
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-20 Score=196.90 Aligned_cols=148 Identities=21% Similarity=0.327 Sum_probs=123.5
Q ss_pred CCCCccCccccCCeeeEEEEEeCC-CcEEEEEEeccccc--CHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSF--KKESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+..+ ++.||||++..... ...++..|++++.+.+ |+||++++++|.+ +...++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~ 93 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT-DSDVFICM 93 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec-CCeEEEEe
Confidence 346667899999999999999865 89999999865332 2456778888777775 9999999999976 46899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||++ +++.+++.... ..++|.++.+++.++++|++|||.. ++|+||||||+||++++++.+||+|||+++
T Consensus 94 e~~~-~~l~~l~~~~~-------~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~ 163 (296)
T cd06618 94 ELMS-TCLDKLLKRIQ-------GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISG 163 (296)
T ss_pred eccC-cCHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccch
Confidence 9986 47777665422 3589999999999999999999963 279999999999999999999999999988
Q ss_pred ccC
Q 035786 668 AQG 670 (693)
Q Consensus 668 ~~~ 670 (693)
...
T Consensus 164 ~~~ 166 (296)
T cd06618 164 RLV 166 (296)
T ss_pred hcc
Confidence 763
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.2e-21 Score=197.97 Aligned_cols=150 Identities=24% Similarity=0.299 Sum_probs=121.1
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|.....||+|+||.||+++.. +|+.||||++..... ....+.+|+.++.++. |+|||++++++.. ++..+++|||
T Consensus 6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-~~~~~~~~e~ 84 (288)
T cd06616 6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-EGDCWICMEL 84 (288)
T ss_pred hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-CCcEEEEEec
Confidence 445568999999999999864 589999999865432 2457899999999996 9999999998875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++. ++.++...... .....+++....+++.+++.||+|||+.+ +|+||||||+||++++++.+||+|||+++..
T Consensus 85 ~~~-~l~~l~~~~~~---~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 85 MDI-SLDKFYKYVYE---VLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred ccC-CHHHHHHHHHH---hhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 874 65554321100 01135899999999999999999999742 7999999999999999999999999999875
Q ss_pred C
Q 035786 670 G 670 (693)
Q Consensus 670 ~ 670 (693)
.
T Consensus 159 ~ 159 (288)
T cd06616 159 V 159 (288)
T ss_pred c
Confidence 3
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.6e-21 Score=196.53 Aligned_cols=146 Identities=20% Similarity=0.317 Sum_probs=128.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv 586 (693)
+|...+.||+|+||.||+|+.. +|+.||+|.+.... ...+.+.+|++++.+++ |+||+++++++.+ ++..++|
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-~~~~~lv 80 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD-EENLYFV 80 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC-CceEEEE
Confidence 5667788999999999999975 68999999986532 22457889999999998 9999999998764 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++... ..++|.....++.+++.||+|||+. +++|+||||+||++++++.++++|||++
T Consensus 81 ~e~~~~~~L~~~l~~~--------~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~ 149 (280)
T cd05581 81 LEYAPNGELLQYIRKY--------GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTA 149 (280)
T ss_pred EcCCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccc
Confidence 9999999999999753 2599999999999999999999988 8999999999999999999999999998
Q ss_pred cccC
Q 035786 667 HAQG 670 (693)
Q Consensus 667 ~~~~ 670 (693)
....
T Consensus 150 ~~~~ 153 (280)
T cd05581 150 KVLD 153 (280)
T ss_pred cccC
Confidence 8763
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-20 Score=196.34 Aligned_cols=163 Identities=25% Similarity=0.367 Sum_probs=131.7
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
|+..+.||+|+||.||+|+. .+++.||||++..... ..+++.+|++++++++|+|++++.+++.. +...++|||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 95 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLVME 95 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-CCeeEEEEE
Confidence 55567899999999999996 4688999999864321 13568899999999999999999999876 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+. |++.+++.... ..+++.++..++.+++.|+.|||+. +++||||||+||++++++.+|++|||++..
T Consensus 96 ~~~-~~l~~~~~~~~-------~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 164 (308)
T cd06634 96 YCL-GSASDLLEVHK-------KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI 164 (308)
T ss_pred ccC-CCHHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCccccee
Confidence 997 68888775422 3488999999999999999999988 899999999999999999999999999887
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
.........+..+.+|++..
T Consensus 165 ~~~~~~~~~~~~y~aPE~~~ 184 (308)
T cd06634 165 MAPANXFVGTPYWMAPEVIL 184 (308)
T ss_pred ecCcccccCCccccCHHHHh
Confidence 64332222333445555543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-20 Score=190.25 Aligned_cols=147 Identities=27% Similarity=0.403 Sum_probs=130.0
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~lv~e 588 (693)
|...+.||+|++|.||+|+.. ++..|++|++..... ..+.+.+|++++++++|+||+++++.+.+.. ...++|+|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 566789999999999999976 689999999876542 3567999999999999999999999887531 57899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++++|.+++.... .++|.++..++.++++|++|||+. +++|+||+|+||++++++.+||+|||.+..
T Consensus 82 ~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 150 (260)
T cd06606 82 YVSGGSLSSLLKKFG--------KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKR 150 (260)
T ss_pred ecCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEe
Confidence 999999999987532 589999999999999999999987 899999999999999999999999999888
Q ss_pred cCC
Q 035786 669 QGD 671 (693)
Q Consensus 669 ~~~ 671 (693)
...
T Consensus 151 ~~~ 153 (260)
T cd06606 151 LGD 153 (260)
T ss_pred ccc
Confidence 743
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.6e-21 Score=183.67 Aligned_cols=152 Identities=24% Similarity=0.317 Sum_probs=132.2
Q ss_pred CCCccCccccCCeeeEEEEE-eCCCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcC----CCeeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEH----ETEKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~----~~~~~lv 586 (693)
.|...+.+|+|||.-||.++ +.+++.+|+|++.-... +.+..++|++..++++||||++++.++... ..+.||+
T Consensus 22 Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll 101 (302)
T KOG2345|consen 22 RYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLL 101 (302)
T ss_pred eEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEE
Confidence 46677899999999999998 67899999999976553 367789999999999999999999987532 3468999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
++|...|+|.+.+.+... ....++..+.+.|..||.+||.+||.. .|+..||||||.|||+.+++++++.|||-+
T Consensus 102 ~Pyy~~Gsl~d~i~~~k~----kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 102 LPYYKRGSLLDEIERLKI----KGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred eehhccccHHHHHHHHhh----cCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCc
Confidence 999999999999986432 124699999999999999999999975 778999999999999999999999999987
Q ss_pred ccc
Q 035786 667 HAQ 669 (693)
Q Consensus 667 ~~~ 669 (693)
...
T Consensus 177 ~~a 179 (302)
T KOG2345|consen 177 TQA 179 (302)
T ss_pred ccc
Confidence 764
|
|
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-20 Score=193.37 Aligned_cols=147 Identities=25% Similarity=0.368 Sum_probs=122.5
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcC---CCCCccceeEEEEcCCC----e
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRV---SHARLVPLLGQCLEHET----E 582 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l---~H~niv~l~g~~~~~~~----~ 582 (693)
|+..+.||+|+||.||+|+.. +++.||||++...... ...+.+|++++.++ +|+|++++.++|.+.+. .
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 445678999999999999986 4899999998643222 34677888877665 69999999999876432 2
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.+++|||++ ++|.+++..... ..++|.++..++.++++||+|||+. +++|+||||+||++++++.+||+|
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~------~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~d 150 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK------PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIAD 150 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEec
Confidence 789999997 589998875321 2489999999999999999999988 899999999999999999999999
Q ss_pred cccccccC
Q 035786 663 LSELHAQG 670 (693)
Q Consensus 663 fgla~~~~ 670 (693)
||+++.+.
T Consensus 151 fg~~~~~~ 158 (287)
T cd07838 151 FGLARIYS 158 (287)
T ss_pred cCcceecc
Confidence 99998863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-20 Score=201.26 Aligned_cols=146 Identities=21% Similarity=0.299 Sum_probs=126.7
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCC----CeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHE----TEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~~l 585 (693)
|...+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+++++.++|+||+++.+++...+ ...++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 566788999999999999975 48999999987533 22467999999999999999999999887542 36799
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||++ ++|.+++++. ..+++..+..++.+++.||+|||+. +|+||||||.||++++++.++++|||+
T Consensus 82 v~e~~~-~~l~~~l~~~--------~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~ 149 (330)
T cd07834 82 VTELME-TDLHKVIKSP--------QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGL 149 (330)
T ss_pred Eecchh-hhHHHHHhCC--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCc
Confidence 999998 5898888642 2589999999999999999999988 899999999999999999999999999
Q ss_pred ccccCC
Q 035786 666 LHAQGD 671 (693)
Q Consensus 666 a~~~~~ 671 (693)
+.....
T Consensus 150 ~~~~~~ 155 (330)
T cd07834 150 ARGVDP 155 (330)
T ss_pred eEeecc
Confidence 998743
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-20 Score=197.89 Aligned_cols=148 Identities=23% Similarity=0.413 Sum_probs=125.2
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCC-----
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHET----- 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~----- 581 (693)
.++|...+.||+|+||.||+|+.. +++.||||++...... ...+.+|++++.+++|+||+++++++.+...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 456888899999999999999964 6899999998643222 3467899999999999999999998764332
Q ss_pred --eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceE
Q 035786 582 --EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 582 --~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~k 659 (693)
..++|+||++. ++...+.... ..+++.+...++.|+++||+|||.. +|+||||||+||++++++.+|
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~-------~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~ 155 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS-------VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILK 155 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEE
Confidence 36899999975 6777765422 3589999999999999999999988 899999999999999999999
Q ss_pred ECCccccccc
Q 035786 660 LGSLSELHAQ 669 (693)
Q Consensus 660 i~Dfgla~~~ 669 (693)
++|||+++..
T Consensus 156 l~dfg~~~~~ 165 (311)
T cd07866 156 IADFGLARPY 165 (311)
T ss_pred ECcCccchhc
Confidence 9999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-20 Score=198.80 Aligned_cols=144 Identities=19% Similarity=0.237 Sum_probs=121.1
Q ss_pred CCccCccccCCeeeEEEEEeC-C--CcEEEEEEeccccc---CHHHHHHHHHHHhcC-CCCCccceeEEEEcC---CCee
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-G--GTTVVVKKVSLHSF---KKESYMMELDLFSRV-SHARLVPLLGQCLEH---ETEK 583 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~--g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~---~~~~ 583 (693)
|...+.||+|+||.||+++.. + +..||||++..... ..+.+.+|++++.++ +|||||++++++... ....
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 556778999999999999964 3 78999999864221 245688999999999 599999999876422 2346
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++++||+. ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 82 ~~~~e~~~-~~L~~~l~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 82 YLYEELME-ADLHQIIRSG--------QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred EEEEeccc-CCHHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcC
Confidence 88899986 6899888642 3489999999999999999999988 8999999999999999999999999
Q ss_pred cccccc
Q 035786 664 SELHAQ 669 (693)
Q Consensus 664 gla~~~ 669 (693)
|+++..
T Consensus 150 g~a~~~ 155 (332)
T cd07857 150 GLARGF 155 (332)
T ss_pred CCceec
Confidence 999875
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.1e-20 Score=193.12 Aligned_cols=144 Identities=26% Similarity=0.418 Sum_probs=123.6
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
|...+.||+|+||.||+|+. .+|+.||+|++...... .+++.+|++++++++|||++++.++|.+ +...++|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 101 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-EHTAWLVME 101 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEEe
Confidence 44456799999999999986 46889999998653322 3468899999999999999999999876 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|++ |++.+++.... ..++|.++..++.+++.|++|||+. +|+||||||+||++++++.+||+|||++..
T Consensus 102 ~~~-~~l~~~l~~~~-------~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~ 170 (313)
T cd06633 102 YCL-GSASDLLEVHK-------KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASK 170 (313)
T ss_pred cCC-CCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcc
Confidence 996 68888776432 3589999999999999999999988 899999999999999999999999999876
Q ss_pred c
Q 035786 669 Q 669 (693)
Q Consensus 669 ~ 669 (693)
.
T Consensus 171 ~ 171 (313)
T cd06633 171 S 171 (313)
T ss_pred c
Confidence 4
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.8e-22 Score=190.77 Aligned_cols=163 Identities=19% Similarity=0.246 Sum_probs=132.7
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC----CeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE----TEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~~l 585 (693)
.+..+.||-|+||+||..+. +||+.||.|++..--.. -+.+.+|++++...+|.|+...+..-.... .+.|.
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 45678899999999999986 58999999998532221 357889999999999999998876432110 24678
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|.|.|.. +|+..+-. .+.|+-....-+..||.+||.|||+. +|+||||||.|.|+++|...||+|||+
T Consensus 135 ~TELmQS-DLHKIIVS--------PQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGL 202 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIVS--------PQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGL 202 (449)
T ss_pred HHHHHHh-hhhheecc--------CCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccc
Confidence 9999964 78777643 24566666667889999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||..+......||..+.|.+|+|
T Consensus 203 ARvee~d~~~hMTqEVVTQYYRA 225 (449)
T KOG0664|consen 203 ARTWDQRDRLNMTHEVVTQYYRA 225 (449)
T ss_pred ccccchhhhhhhHHHHHHHHhcc
Confidence 99985555555888999999987
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-20 Score=203.30 Aligned_cols=161 Identities=17% Similarity=0.256 Sum_probs=131.7
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCC-C-----CCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-H-----ARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H-----~niv~l~g~~~~~~~~~~l 585 (693)
.|...++||+|+||.|.||.. .+++.||||.++....-..+-..|+.+|..++ | -|+|+++.|+.. .+..+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f-r~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF-RNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc-ccceee
Confidence 466788999999999999985 56999999999765544445667999999997 4 379999999886 478999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC--CceEECCc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK--FEVRLGSL 663 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~--~~~ki~Df 663 (693)
|+|.+.. +|.++|+...- ..++......|+.||+.||.+||.. +|||+||||+||||.+- ..+||.||
T Consensus 266 VfELL~~-NLYellK~n~f------~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDF 335 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNKF------RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDF 335 (586)
T ss_pred eehhhhh-hHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEec
Confidence 9999876 99999986432 4588899999999999999999988 99999999999999854 58999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|.+........ .++.++.|||
T Consensus 336 GSSc~~~q~vy----tYiQSRfYRA 356 (586)
T KOG0667|consen 336 GSSCFESQRVY----TYIQSRFYRA 356 (586)
T ss_pred ccccccCCcce----eeeecccccc
Confidence 99999744322 3455555554
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-20 Score=181.92 Aligned_cols=138 Identities=15% Similarity=0.164 Sum_probs=108.1
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEEecccccC----------HHHH-----------------HHHHHHHhcCCCCCcc
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK----------KESY-----------------MMELDLFSRVSHARLV 570 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~----------~~~f-----------------~~Ei~~l~~l~H~niv 570 (693)
..||+|+||.||+|...+|+.||||.+...... ...| .+|++.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 579999999999999888999999998653211 0122 3499999999988875
Q ss_pred ceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhh-ccCCCCCeEecCCCCCC
Q 035786 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL-HHECNPPLVHRDVQASS 649 (693)
Q Consensus 571 ~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yL-H~~~~p~iiHrDlk~~N 649 (693)
....+.. ...++||||++++++....... ..+++.+..+++.+++.+|.|+ |.. +|+||||||+|
T Consensus 83 ~p~~~~~---~~~~iVmE~i~g~~l~~~~~~~--------~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~N 148 (190)
T cd05147 83 CPEPILL---KSHVLVMEFIGDDGWAAPRLKD--------APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYN 148 (190)
T ss_pred CCcEEEe---cCCEEEEEEeCCCCCcchhhhc--------CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHH
Confidence 4443322 2348999999998776543211 2478899999999999999999 555 89999999999
Q ss_pred eeeCCCCceEECCcccccccC
Q 035786 650 ILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 650 ILld~~~~~ki~Dfgla~~~~ 670 (693)
|+++ +..+++.|||+|...+
T Consensus 149 Ili~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 149 LLYH-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred EEEE-CCcEEEEEccccccCC
Confidence 9998 4789999999998653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-20 Score=190.33 Aligned_cols=150 Identities=23% Similarity=0.367 Sum_probs=129.2
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|+..+.||+|+||.||+++. .+++.+|+|++..... ...++.+|++++++++|+||+++.+++.+ +...++||||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~ 80 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD-GNKLCIVMEY 80 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc-CCEEEEEehh
Confidence 56678899999999999985 4688999999875332 24578899999999999999999998875 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++++|.+++.+... ....+++.....++.+++.||+|||.. +++||||||+||+++++..+|++|||+++..
T Consensus 81 ~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~ 153 (256)
T cd08530 81 APFGDLSKAISKRKK----KRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVL 153 (256)
T ss_pred cCCCCHHHHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhh
Confidence 999999999875321 124589999999999999999999988 9999999999999999999999999999887
Q ss_pred CC
Q 035786 670 GD 671 (693)
Q Consensus 670 ~~ 671 (693)
..
T Consensus 154 ~~ 155 (256)
T cd08530 154 KK 155 (256)
T ss_pred cc
Confidence 43
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.8e-20 Score=188.49 Aligned_cols=140 Identities=18% Similarity=0.224 Sum_probs=117.6
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHH-hcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLF-SRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l-~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
+.||+|+||.||+|+.. +|+.||||.+...... ...+..|..++ ...+|+|++++++++.+ ++..++|+||++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS-KDYLYLVMEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-CCeEEEEEeccC
Confidence 45899999999999874 5899999998653221 23455565554 45589999999998875 468899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+|+|.++++.. ..+++.....++.|++.||.|||.. +|+||||||+||++++++.+|++|||+++..
T Consensus 81 ~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 81 GGDCASLIKTL--------GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred CCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 99999999653 2478889999999999999999988 8999999999999999999999999998875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.8e-20 Score=196.78 Aligned_cols=141 Identities=22% Similarity=0.295 Sum_probs=121.5
Q ss_pred cCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---------------HHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 035786 517 TNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---------------KESYMMELDLFSRVSHARLVPLLGQCLEHE 580 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---------------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~ 580 (693)
.+.||+|+||.||+|... +++.||||++...... ...+.+|++++.+++|+||+++++++.. +
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~ 92 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVE-G 92 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEec-C
Confidence 467999999999999864 6899999988643211 1247889999999999999999998875 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
+..++||||++ |+|.+++... ..+++.+...++.+++.||+|||.. +|+||||||+||+++.++.+|+
T Consensus 93 ~~~~lv~e~~~-~~l~~~l~~~--------~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 93 DFINLVMDIMA-SDLKKVVDRK--------IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred CcEEEEEeccc-cCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEE
Confidence 67899999997 6999988642 2488999999999999999999987 8999999999999999999999
Q ss_pred CCcccccccC
Q 035786 661 GSLSELHAQG 670 (693)
Q Consensus 661 ~Dfgla~~~~ 670 (693)
+|||+++..+
T Consensus 161 ~dfg~~~~~~ 170 (335)
T PTZ00024 161 ADFGLARRYG 170 (335)
T ss_pred CCccceeecc
Confidence 9999988764
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.7e-20 Score=178.46 Aligned_cols=138 Identities=16% Similarity=0.150 Sum_probs=111.2
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEEecccccC---------------------------HHHHHHHHHHHhcCCCCCcc
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---------------------------KESYMMELDLFSRVSHARLV 570 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---------------------------~~~f~~Ei~~l~~l~H~niv 570 (693)
..||+|+||.||+|+..+|+.||||.+...... ...+.+|.+.+.+++|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 579999999999999878999999998653210 11245799999999999986
Q ss_pred ceeEEEEcCCCeeEEEEccCCCCChhhh-hhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc-CCCCCeEecCCCCC
Q 035786 571 PLLGQCLEHETEKLLVYKYMVCGDLASS-LHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH-ECNPPLVHRDVQAS 648 (693)
Q Consensus 571 ~l~g~~~~~~~~~~lv~ey~~~GsL~~~-l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~-~~~p~iiHrDlk~~ 648 (693)
....+... ..+|||||++++++... +.. ..++..+..+++.+++.++.|+|+ . +|+||||||+
T Consensus 83 ~p~~~~~~---~~~lVmE~~~g~~~~~~~l~~---------~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~ 147 (190)
T cd05145 83 VPEPILLK---KNVLVMEFIGDDGSPAPRLKD---------VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEY 147 (190)
T ss_pred CceEEEec---CCEEEEEEecCCCchhhhhhh---------ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChh
Confidence 65554432 34899999998865433 321 236778889999999999999998 7 9999999999
Q ss_pred CeeeCCCCceEECCcccccccCC
Q 035786 649 SILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 649 NILld~~~~~ki~Dfgla~~~~~ 671 (693)
||+++ ++++++.|||+++....
T Consensus 148 NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 148 NILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred hEEEE-CCCEEEEEcccceecCC
Confidence 99999 89999999999998744
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-20 Score=192.04 Aligned_cols=144 Identities=24% Similarity=0.345 Sum_probs=126.1
Q ss_pred CccCccccCCeeeEEEEEeC-CCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 515 SETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
+..+.||+|+||.||+|+.. +++.||+|.+.... ...+.+.+|++++++++|+|++++.+++.+. ...++||||+
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~~v~e~~ 80 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-RKLYLVFEYC 80 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC-CceEEEecCc
Confidence 44567999999999999975 58999999987643 2246788999999999999999999988754 6789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+ ++|.++++... ..+++.++.+++.++++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 81 ~-~~l~~~i~~~~-------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~ 149 (282)
T cd07829 81 D-MDLKKYLDKRP-------GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFG 149 (282)
T ss_pred C-cCHHHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccC
Confidence 8 59999997542 2489999999999999999999998 89999999999999999999999999998763
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=186.75 Aligned_cols=151 Identities=19% Similarity=0.213 Sum_probs=120.5
Q ss_pred HHHHHHhCCCCccCcc--ccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCC
Q 035786 505 EQLLRATGNFSETNLI--KKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHE 580 (693)
Q Consensus 505 ~~l~~at~~~~~~~~i--g~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~ 580 (693)
.+.....++|...+.+ |+|+||.||+++. .++..+|+|.......... |+.....+ +||||+++++++.. +
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~-~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTT-L 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEec-C
Confidence 3344444556666665 9999999999986 4688899999865332211 22222212 79999999998876 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC-ceE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF-EVR 659 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~-~~k 659 (693)
+..++||||+++|+|.+++.... .++|.+...++.|+++|+.|||+. +++||||||+||+++.++ .++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~--------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~ 150 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEG--------KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIY 150 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEE
Confidence 68999999999999999997532 589999999999999999999988 899999999999999998 999
Q ss_pred ECCcccccccCC
Q 035786 660 LGSLSELHAQGD 671 (693)
Q Consensus 660 i~Dfgla~~~~~ 671 (693)
|+|||+++....
T Consensus 151 l~dfg~~~~~~~ 162 (267)
T PHA03390 151 LCDYGLCKIIGT 162 (267)
T ss_pred EecCccceecCC
Confidence 999999887643
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.7e-21 Score=215.53 Aligned_cols=171 Identities=19% Similarity=0.190 Sum_probs=135.2
Q ss_pred HHHHHhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 035786 506 QLLRATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHE 580 (693)
Q Consensus 506 ~l~~at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~ 580 (693)
+++--.++|...++||+|+||.|...+.. .++.+|+|++++... ...-|+.|-.+|.--..+=||.+. |.++.+
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~Lh-yAFQD~ 147 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLH-YAFQDE 147 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHH-HHhcCc
Confidence 33334567888999999999999999975 588999999976322 134588899999988888899886 445556
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
...|+||||||||||-.++.+.. .++.....-++..|..||.-||.- ++|||||||.|||||..|.+|+
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~--------~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikL 216 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD--------RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKL 216 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC--------CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEee
Confidence 78999999999999999997543 244433445667888999999988 9999999999999999999999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||-+-.+.....-.....+|||-|++
T Consensus 217 ADFGsClkm~~dG~V~s~~aVGTPDYIS 244 (1317)
T KOG0612|consen 217 ADFGSCLKMDADGTVRSSVAVGTPDYIS 244 (1317)
T ss_pred ccchhHHhcCCCCcEEeccccCCCCccC
Confidence 9999877765333333566889999975
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.6e-20 Score=194.23 Aligned_cols=140 Identities=24% Similarity=0.246 Sum_probs=118.1
Q ss_pred ccccCCeeeEEEEEeCCCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCCh
Q 035786 519 LIKKGHSGDLFKGTLAGGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDL 595 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL 595 (693)
.+|.|+++.||+++. +|+.||||++.... ...+.+.+|++++++++|+||+++++++.+ ++..+++|||+++|+|
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~l 86 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV-DSELYVVSPLMAYGSC 86 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec-CCeEEEEEeccCCCCH
Confidence 345556666666655 68999999986542 224679999999999999999999998875 4678999999999999
Q ss_pred hhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 596 ASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 596 ~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
.++++.... ..+++.....++.|+++||+|||+. +|+||||||+||++++++.+|++|||.+..+
T Consensus 87 ~~~l~~~~~------~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~ 151 (314)
T cd08216 87 EDLLKTHFP------EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSM 151 (314)
T ss_pred HHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceee
Confidence 999975322 2478888999999999999999988 8999999999999999999999999988755
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-20 Score=214.01 Aligned_cols=276 Identities=25% Similarity=0.359 Sum_probs=210.2
Q ss_pred CcceeecCCCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcC
Q 035786 54 WRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGS 133 (693)
Q Consensus 54 W~gv~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~ 133 (693)
|.-..|-....+.+++++...+ .+|. .+ .+.|+.|++++|.+. .+|..+ .++|++|+|++|+|+ .
T Consensus 170 ~r~~~Cl~~~~~~L~L~~~~Lt---sLP~-----~I--p~~L~~L~Ls~N~Lt-sLP~~l---~~nL~~L~Ls~N~Lt-s 234 (754)
T PRK15370 170 QRMRDCLKNNKTELRLKILGLT---TIPA-----CI--PEQITTLILDNNELK-SLPENL---QGNIKTLYANSNQLT-S 234 (754)
T ss_pred HHHHhhcccCceEEEeCCCCcC---cCCc-----cc--ccCCcEEEecCCCCC-cCChhh---ccCCCEEECCCCccc-c
Confidence 3334565556788888875433 2332 11 146899999999988 688765 468999999999998 5
Q ss_pred CCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCC
Q 035786 134 IPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSL 213 (693)
Q Consensus 134 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 213 (693)
+|..+. .+|+.|+|++|++. .+|..+. ++|++|+|++|+++ .+|..+. .+|+.|++++|++++ +|..+.
T Consensus 235 LP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp-- 303 (754)
T PRK15370 235 IPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP-- 303 (754)
T ss_pred CChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--
Confidence 676654 47999999999998 6787664 58999999999998 5787664 589999999999985 665543
Q ss_pred CCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEE
Q 035786 214 SSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVD 293 (693)
Q Consensus 214 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~ 293 (693)
++|+.|++++|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+++ .+|..+ .++|+.|+
T Consensus 304 ~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l---p~~L~~Ld 373 (754)
T PRK15370 304 SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL---PPTITTLD 373 (754)
T ss_pred hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh---cCCcCEEE
Confidence 579999999999985 565443 689999999999986 676664 79999999999998 567654 25899999
Q ss_pred ccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCcc---CcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcc
Q 035786 294 LSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPIL---STNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYF 370 (693)
Q Consensus 294 Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~---~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l 370 (693)
+++|+|+. +|..+. .+|+.|++++|+|+ .+|.. .....+.+..+++.+|.++. ..+++++.+ ++.+.+
T Consensus 374 Ls~N~Lt~-LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~----~tl~~L~~L-l~s~~~ 444 (754)
T PRK15370 374 VSRNALTN-LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE----RTIQNMQRL-MSSVGY 444 (754)
T ss_pred CCCCcCCC-CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH----HHHHHHHHh-hhcccc
Confidence 99999995 566553 47999999999998 55642 22345678899999999873 345556656 555666
Q ss_pred eeec
Q 035786 371 QGTV 374 (693)
Q Consensus 371 ~g~i 374 (693)
.|.+
T Consensus 445 ~gp~ 448 (754)
T PRK15370 445 QGPR 448 (754)
T ss_pred cCCc
Confidence 6543
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-20 Score=191.32 Aligned_cols=163 Identities=21% Similarity=0.248 Sum_probs=131.6
Q ss_pred cCccccCCeeeEEEEE-eCCCcEEEEEEecccccC--------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 517 TNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFK--------KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~~--------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.+++|+|||..||||. +...+-||||.-...... .+...+|-++-+.+.||.||+++.|+.-..+..+-|+
T Consensus 468 LhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVL 547 (775)
T KOG1151|consen 468 LHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVL 547 (775)
T ss_pred HHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeee
Confidence 4679999999999998 456788999976443222 2356789999999999999999999864445678999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC---CCCceEECCcc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD---DKFEVRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld---~~~~~ki~Dfg 664 (693)
|||++-+|+-||...+ .++......|+.+|..||.||.+ .+|||||-||||.||||- ..+++||.|||
T Consensus 548 EYceGNDLDFYLKQhk--------lmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 548 EYCEGNDLDFYLKQHK--------LMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred eecCCCchhHHHHhhh--------hhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 9999999999997643 37778888999999999999986 589999999999999996 34889999999
Q ss_pred cccccC-CCCcce-----eeeeehhhhhhh
Q 035786 665 ELHAQG-DSHQNV-----LTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~-~~~~~~-----~~~~~~~~~y~a 688 (693)
+.+++. ++...+ .....||-||+.
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLP 648 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLP 648 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecC
Confidence 999983 333322 223568888863
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.1e-20 Score=194.07 Aligned_cols=141 Identities=23% Similarity=0.289 Sum_probs=120.7
Q ss_pred CccccC--CeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKG--HSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G--~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
..||+| +||+||+++. .+|+.||||.+...... .+.+.+|+.+++.++|||||+++++|.. +...++|+||++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT-GSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-CCceEEEEeccc
Confidence 356776 9999999986 47999999998754322 3578899999999999999999999875 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
+|+|.+++..... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+|++||+.+..
T Consensus 83 ~~~l~~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~ 150 (328)
T cd08226 83 YGSANSLLKTYFP------EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYS 150 (328)
T ss_pred CCCHHHHHHhhcc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhh
Confidence 9999999875321 3488999999999999999999987 899999999999999999999999976543
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.81 E-value=7e-20 Score=190.12 Aligned_cols=145 Identities=20% Similarity=0.342 Sum_probs=125.5
Q ss_pred CccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 515 SETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
...+.||+|++|.||+|... +|+.+|+|++...... .+.+.+|++++++++|+||+++.+++.. +...++|+||+
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~ 80 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH-KGDLYLVFEFM 80 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc-CCCEEEEEecc
Confidence 34567999999999999874 6899999998654322 4678899999999999999999998875 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++ +|.+++.... ..+++.++..++.+++.||+|||.. +|+|+||||+||++++++.+||+|||.+....
T Consensus 81 ~~-~l~~~l~~~~-------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~ 149 (283)
T cd05118 81 DT-DLYKLIKDRQ-------RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFG 149 (283)
T ss_pred CC-CHHHHHHhhc-------ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecC
Confidence 85 8888886532 3589999999999999999999988 89999999999999999999999999998774
Q ss_pred C
Q 035786 671 D 671 (693)
Q Consensus 671 ~ 671 (693)
.
T Consensus 150 ~ 150 (283)
T cd05118 150 S 150 (283)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.1e-20 Score=209.91 Aligned_cols=173 Identities=19% Similarity=0.179 Sum_probs=117.0
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC-C----CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEE-----EcC
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA-G----GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQC-----LEH 579 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~-~----g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~-----~~~ 579 (693)
..++|...+.||+|+||.||+|+.. + +..||||++..... .+.+..| .+....|.+++.+...+ ...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKK 206 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-hHHHHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence 4567888999999999999999975 4 68999999864321 2222222 12222233333222111 123
Q ss_pred CCeeEEEEccCCCCChhhhhhccCCCCC-------C-----CCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCC
Q 035786 580 ETEKLLVYKYMVCGDLASSLHRVTDLED-------D-----SLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQA 647 (693)
Q Consensus 580 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~-------~-----~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~ 647 (693)
+...++||||+++|+|.++++....... . ......+.....|+.|++.||+|||+. +|+||||||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP 283 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKP 283 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCH
Confidence 4578999999999999999975321000 0 000112233457899999999999988 999999999
Q ss_pred CCeeeCC-CCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 648 SSILLDD-KFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 648 ~NILld~-~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++ ++.+||+|||+|+.......+..+.+++++.|||
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~A 325 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAA 325 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccC
Confidence 9999996 5899999999998764433333445667777765
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.4e-20 Score=192.32 Aligned_cols=162 Identities=19% Similarity=0.223 Sum_probs=135.3
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|+.++.||+|.|.+|-.|+. =.|+.||||.+++.... .....+|++.|+-++|||||+|+.+. +.....|||+|.
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi-DTQTKlyLiLEL 98 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI-DTQTKLYLILEL 98 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh-cccceEEEEEEe
Confidence 55567899999999998874 36999999999876544 45688899999999999999999865 445689999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEECCcccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLGSLSELHA 668 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~Dfgla~~ 668 (693)
=.+|+|++||-++.. -+...-..++..||..|+.|.|+- ++|||||||+||.+-+. +-+|+.|||+.-.
T Consensus 99 GD~GDl~DyImKHe~-------Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNk 168 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEE-------GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNK 168 (864)
T ss_pred cCCchHHHHHHhhhc-------cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeecccccc
Confidence 999999999976542 366777788999999999999988 89999999999988765 7899999999887
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
+..+.. .+..||...|-|
T Consensus 169 f~PG~k--L~TsCGSLAYSA 186 (864)
T KOG4717|consen 169 FQPGKK--LTTSCGSLAYSA 186 (864)
T ss_pred CCCcch--hhcccchhhccC
Confidence 644444 456788888865
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-20 Score=196.70 Aligned_cols=145 Identities=19% Similarity=0.339 Sum_probs=122.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCC---------
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHE--------- 580 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~--------- 580 (693)
.+|...+.||+|+||.||+|.. .+|+.||+|++...... .+.+.+|++++++++||||+++++++....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 4577788999999999999986 46899999998654433 567889999999999999999998665322
Q ss_pred ----CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CC
Q 035786 581 ----TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DK 655 (693)
Q Consensus 581 ----~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~ 655 (693)
...++||||++ ++|.+++.. ..+++.....++.|++.||.|||+. +|+||||||+||+++ ++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~---------~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~ 151 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ---------GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTED 151 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCC
Confidence 24689999998 589888753 2488999999999999999999988 899999999999998 45
Q ss_pred CceEECCccccccc
Q 035786 656 FEVRLGSLSELHAQ 669 (693)
Q Consensus 656 ~~~ki~Dfgla~~~ 669 (693)
..+|++|||+++..
T Consensus 152 ~~~kl~dfg~~~~~ 165 (342)
T cd07854 152 LVLKIGDFGLARIV 165 (342)
T ss_pred ceEEECCcccceec
Confidence 68999999999875
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-19 Score=205.89 Aligned_cols=235 Identities=27% Similarity=0.309 Sum_probs=185.8
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
..-..|+|+.|.|+ .+|..+. ++|+.|++++|+++. +|. .+++|++|+|++|+|+ .+|.. .++|+.|++
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeec
Confidence 45678999999998 6888775 489999999999984 665 3589999999999999 45653 468999999
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccccc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQ 277 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 277 (693)
++|.++ .+|.. .++|+.|++++|+++. +|.. +++|+.|++++|++++ +|.. ..+|+.|++++|++++
T Consensus 270 s~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~- 336 (788)
T PRK15387 270 FSNPLT-HLPAL---PSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS- 336 (788)
T ss_pred cCCchh-hhhhc---hhhcCEEECcCCcccc-cccc---ccccceeECCCCcccc-CCCC---cccccccccccCcccc-
Confidence 999997 45553 3678899999999984 5653 4689999999999996 4542 2468899999999984
Q ss_pred CCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCC
Q 035786 278 LSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSF 357 (693)
Q Consensus 278 i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~ 357 (693)
+|.. ..+|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|.. ...|+.|++++|+|++ +|. ..
T Consensus 337 LP~l----p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l----~~~L~~LdLs~N~Lt~-LP~-l~ 401 (788)
T PRK15387 337 LPTL----PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL----PSGLKELIVSGNRLTS-LPV-LP 401 (788)
T ss_pred cccc----ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc----ccccceEEecCCcccC-CCC-cc
Confidence 5641 2589999999999996 5543 3688999999999994 7742 3578999999999986 553 34
Q ss_pred CCCCEEEccCCcceeecCCCcC--cccccCCCcCCCC
Q 035786 358 RKFSLIDLSSNYFQGTVADDRG--RNVSLGRNCLQSV 392 (693)
Q Consensus 358 ~~l~~ldLs~N~l~g~ip~~~~--~~~~l~~n~l~g~ 392 (693)
++|+.||+|+|.|++ +|.... ..+.+++|+++..
T Consensus 402 s~L~~LdLS~N~Lss-IP~l~~~L~~L~Ls~NqLt~L 437 (788)
T PRK15387 402 SELKELMVSGNRLTS-LPMLPSGLLSLSVYRNQLTRL 437 (788)
T ss_pred cCCCEEEccCCcCCC-CCcchhhhhhhhhccCccccc
Confidence 689999999999985 775432 3578889988754
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.81 E-value=9e-19 Score=214.06 Aligned_cols=250 Identities=22% Similarity=0.208 Sum_probs=142.5
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+.+|+.|+|++|.+. .+|..+..+++|+.|+|++|...+.+|. ++.+++|++|+|++|.....+|..+.++++|+.|+
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 445555555555544 3444455555555555555544344442 45555555555555554445555555555555555
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc-
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE- 275 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~- 275 (693)
+++|...+.+|..+ ++++|+.|++++|...+.+|.. .++|++|++++|.+. .+|..+ .+++|++|++.++...
T Consensus 688 L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~ 761 (1153)
T PLN03210 688 MSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEK 761 (1153)
T ss_pred CCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhh
Confidence 55544434455443 4555555555555444444432 234555555555554 344333 3455555555442211
Q ss_pred --c---cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccce
Q 035786 276 --G---QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYG 350 (693)
Q Consensus 276 --g---~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g 350 (693)
+ .++...+...++|+.|++++|...+.+|.++..+++|+.|++++|..-+.+|... .+.+|+.|++++|..-.
T Consensus 762 l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~--~L~sL~~L~Ls~c~~L~ 839 (1153)
T PLN03210 762 LWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI--NLESLESLDLSGCSRLR 839 (1153)
T ss_pred ccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC--CccccCEEECCCCCccc
Confidence 0 0111112234578888888888777888888888888888888876555677432 56778888888876555
Q ss_pred ecCCCCCCCCCEEEccCCcceeecCCCc
Q 035786 351 DLNSSSFRKFSLIDLSSNYFQGTVADDR 378 (693)
Q Consensus 351 ~~~~~~~~~l~~ldLs~N~l~g~ip~~~ 378 (693)
.+|. ...+++.|+|++|.++ .+|.++
T Consensus 840 ~~p~-~~~nL~~L~Ls~n~i~-~iP~si 865 (1153)
T PLN03210 840 TFPD-ISTNISDLNLSRTGIE-EVPWWI 865 (1153)
T ss_pred cccc-cccccCEeECCCCCCc-cChHHH
Confidence 5553 3457788888888876 466544
|
syringae 6; Provisional |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.3e-20 Score=196.58 Aligned_cols=147 Identities=20% Similarity=0.307 Sum_probs=125.2
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCC-----
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHET----- 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~----- 581 (693)
.++|...+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++++++|+||+++.+++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 456778889999999999999974 58899999986432 123567889999999999999999987654321
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++|+||+ +++|.+++.. ..+++.+...++.++++|++|||.. +|+||||||+||++++++.+||+
T Consensus 94 ~~~lv~e~~-~~~L~~~~~~---------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~ 160 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVKC---------QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKIL 160 (343)
T ss_pred cEEEEEecC-CCCHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEc
Confidence 378999999 5799998864 2489999999999999999999987 89999999999999999999999
Q ss_pred CcccccccC
Q 035786 662 SLSELHAQG 670 (693)
Q Consensus 662 Dfgla~~~~ 670 (693)
|||+++...
T Consensus 161 dfg~~~~~~ 169 (343)
T cd07851 161 DFGLARHTD 169 (343)
T ss_pred ccccccccc
Confidence 999998763
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-19 Score=189.08 Aligned_cols=165 Identities=13% Similarity=0.106 Sum_probs=116.9
Q ss_pred CCCCccCccccCCeeeEEEEEeCC----CcEEEEEEecccccC--H----------HHHHHHHHHHhcCCCCCccceeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFK--K----------ESYMMELDLFSRVSHARLVPLLGQ 575 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~~--~----------~~f~~Ei~~l~~l~H~niv~l~g~ 575 (693)
+.|...++||+|+||.||+|...+ +..+|+|........ . .....+...+..++|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 357778899999999999999754 345666653322111 1 122334455677899999999997
Q ss_pred EEcCCC---eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 576 CLEHET---EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 576 ~~~~~~---~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
+..... ..++++|+... ++.+.+... ...++.....|+.|+++||+|||+. +|+||||||+|||+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill 159 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRI--------KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMV 159 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhh--------ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 654322 34677777653 565555432 1256888899999999999999988 99999999999999
Q ss_pred CCCCceEECCcccccccCCCCc------ceeeeeehhhhhhh
Q 035786 653 DDKFEVRLGSLSELHAQGDSHQ------NVLTRFLWRQLYQS 688 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~~~~~~------~~~~~~~~~~~y~a 688 (693)
++++.+||+|||+++....... .......||++|+|
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a 201 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAG 201 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccC
Confidence 9999999999999987632111 11122457788876
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-19 Score=183.52 Aligned_cols=138 Identities=23% Similarity=0.284 Sum_probs=122.4
Q ss_pred cccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 520 IKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 520 ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
||+|+||.||+++.. +++.||+|.+..... ..+.+.+|++++++++|+||+++++.+.. +...++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT-EEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec-CCeeEEEEecCCCCc
Confidence 699999999999975 589999999875433 23578999999999999999999987754 567899999999999
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|.+++... ..+++.....++.+++.|+.|||.. +++|+||||+||+++++++++++|||++...
T Consensus 80 L~~~l~~~--------~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 143 (250)
T cd05123 80 LFSHLSKE--------GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKEL 143 (250)
T ss_pred HHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceec
Confidence 99999753 2489999999999999999999987 9999999999999999999999999998876
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-21 Score=187.39 Aligned_cols=164 Identities=23% Similarity=0.270 Sum_probs=125.4
Q ss_pred ccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc--CHHHHHHHHHHHhc-CCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 516 ETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF--KKESYMMELDLFSR-VSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~-l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
+...||.|.||+|+|-.. +.|+..|||++..... +++++..|.++..+ =+.||||+++|.++. ++..|+-||.|.
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~-EGdcWiCMELMd 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS-EGDCWICMELMD 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc-CCceeeeHHHHh
Confidence 345699999999999986 5699999999976443 35679999987554 478999999999985 578999999997
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
- ||+.+-...-. .....+...-.-+|+..+.+||.||.++. .|||||+||+|||||..+.+|++|||....+.+
T Consensus 147 ~-SlDklYk~vy~---vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 147 I-SLDKLYKRVYS---VQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred h-hHHHHHHHHHH---HHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence 4 76654332110 00134677777788888999999998764 899999999999999999999999999877644
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
+.. .|.-.|-+.|||
T Consensus 221 SiA--kT~daGCrpYmA 235 (361)
T KOG1006|consen 221 SIA--KTVDAGCRPYMA 235 (361)
T ss_pred HHH--hhhccCCccccC
Confidence 333 334455566665
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=213.30 Aligned_cols=261 Identities=25% Similarity=0.293 Sum_probs=174.2
Q ss_pred cCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCE
Q 035786 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSN 170 (693)
Q Consensus 91 ~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 170 (693)
...+|+.|+++++.+. .+|..+. .+++|+.|+|++|...+.+|. ++.+++|++|+|++|.....+|..++++++|+.
T Consensus 609 ~~~~L~~L~L~~s~l~-~L~~~~~-~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~ 685 (1153)
T PLN03210 609 RPENLVKLQMQGSKLE-KLWDGVH-SLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLED 685 (1153)
T ss_pred CccCCcEEECcCcccc-ccccccc-cCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCE
Confidence 4578889999988765 5666665 489999999998876667774 788899999999998877788999999999999
Q ss_pred EEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcC
Q 035786 171 LDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250 (693)
Q Consensus 171 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 250 (693)
|++++|...+.+|..+ ++++|+.|++++|...+.+|.. ..+|+.|++++|.++ .+|..+ .+++|++|++.++..
T Consensus 686 L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~ 759 (1153)
T PLN03210 686 LDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKS 759 (1153)
T ss_pred EeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccch
Confidence 9999876666788766 7889999999988766666653 457888889888876 456544 455666666654221
Q ss_pred -------cccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcC
Q 035786 251 -------SGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNI 323 (693)
Q Consensus 251 -------~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l 323 (693)
....|..+...++|+.|+|++|...+.+|.. +.++++|+.|++++|..-+.+|..+ .+++|+.|++++|..
T Consensus 760 ~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~s-i~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~ 837 (1153)
T PLN03210 760 EKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSS-IQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSR 837 (1153)
T ss_pred hhccccccccchhhhhccccchheeCCCCCCccccChh-hhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCc
Confidence 1111222233456666666666555555554 3566666666666654444555544 456666666666544
Q ss_pred cccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccC
Q 035786 324 TGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSS 367 (693)
Q Consensus 324 ~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~ 367 (693)
-..+|.. ..+++.|+|++|.+.. +|. ..+++|+.|+|++
T Consensus 838 L~~~p~~----~~nL~~L~Ls~n~i~~-iP~si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 838 LRTFPDI----STNISDLNLSRTGIEE-VPWWIEKFSNLSFLDMNG 878 (1153)
T ss_pred ccccccc----ccccCEeECCCCCCcc-ChHHHhcCCCCCEEECCC
Confidence 4444421 2355666666666653 333 4455666666665
|
syringae 6; Provisional |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.9e-20 Score=186.79 Aligned_cols=147 Identities=18% Similarity=0.247 Sum_probs=119.6
Q ss_pred CCccCccccCCeeeEEEEEeCC-CcEEEEEEecc---cc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLAG-GTTVVVKKVSL---HS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~---~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
|...+.||+|+||.||+++... +..+++|.++. .. ....++.+|++++++++||||+++++++.+ ....++|
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 80 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE-RDAFCII 80 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-CCceEEE
Confidence 5556789999999999998643 44455555432 11 123457789999999999999999998875 3578999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++++|.++++.... ....++|.++..++.+++.|+.|||+. +++|+||||+||++++ ..+|++|||++
T Consensus 81 ~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~ 152 (260)
T cd08222 81 TEYCEGRDLDCKLEELKH----TGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVS 152 (260)
T ss_pred EEeCCCCCHHHHHHHHhh----cccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCce
Confidence 999999999999875321 124599999999999999999999987 9999999999999985 56999999998
Q ss_pred ccc
Q 035786 667 HAQ 669 (693)
Q Consensus 667 ~~~ 669 (693)
+..
T Consensus 153 ~~~ 155 (260)
T cd08222 153 RLL 155 (260)
T ss_pred eec
Confidence 876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.9e-19 Score=179.98 Aligned_cols=132 Identities=22% Similarity=0.193 Sum_probs=113.8
Q ss_pred CCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCChhhhhhc
Q 035786 523 GHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHR 601 (693)
Q Consensus 523 G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~ 601 (693)
|.||.||++.. .+|+.||+|++.... .+.+|...+....||||+++++++.+ .+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVS-EDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheec-CCeEEEEEecCCCCCHHHHHHH
Confidence 89999999986 568999999986543 34456666667789999999998875 4678999999999999999865
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 602 VTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 602 ~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
. ..+++.....++.+++.||+|||.. +|+||||||+||++++++.++++|||.++...
T Consensus 79 ~--------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~ 136 (237)
T cd05576 79 F--------LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVE 136 (237)
T ss_pred h--------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccc
Confidence 3 2389999999999999999999987 89999999999999999999999999877653
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-19 Score=169.16 Aligned_cols=162 Identities=22% Similarity=0.257 Sum_probs=125.4
Q ss_pred cCccccCCeeeEEEEEe-CCCcEEEEEEeccc--ccCHHHHHHHHHHH-hcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 517 TNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLH--SFKKESYMMELDLF-SRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~--~~~~~~f~~Ei~~l-~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
...||+|+||.|=|-+. .+|+..|||++... .+.+++..+|+.+. +....|.+|.++|.++. +...++-||-|.-
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r-egdvwIcME~M~t 129 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR-EGDVWICMELMDT 129 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc-cccEEEeHHHhhh
Confidence 45699999999988875 57999999998653 33356778888775 45579999999998874 5789999999975
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDS 672 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~ 672 (693)
||+.|-+..-+ ....++..-.=+||..|.+||.|||++. .+||||+||+|||++.++++|++|||....+.++
T Consensus 130 -Sldkfy~~v~~----~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 130 -SLDKFYRKVLK----KGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred -hHHHHHHHHHh----cCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 88776654321 1134777778899999999999999874 7999999999999999999999999998776444
Q ss_pred Ccceeeeeehhhhhhh
Q 035786 673 HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 673 ~~~~~~~~~~~~~y~a 688 (693)
.. .|.-.|-..|||
T Consensus 203 iA--kt~daGCkpYma 216 (282)
T KOG0984|consen 203 IA--KTMDAGCKPYMA 216 (282)
T ss_pred hH--HHHhcCCCccCC
Confidence 33 121234455555
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-20 Score=194.26 Aligned_cols=161 Identities=16% Similarity=0.201 Sum_probs=135.7
Q ss_pred CCccCccccCCeeeEEEEEeCCCc-EEEEEEecc----cccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGT-TVVVKKVSL----HSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~-~vavK~l~~----~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+.....+|-|+||.|=..+..... .+|+|.+++ .+.++++...|-.+|.+.+.|.||+++--|.+ +..+|+.||
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd-~kyvYmLmE 500 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRD-SKYVYMLME 500 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhcc-chhhhhhHH
Confidence 334456999999999998876533 488888864 34456788899999999999999999987765 457899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
-|-+|.|...|+.... ++-.+-.-|+.++.+|++|||.. +||+|||||+|.+||.++.+|+-|||+||.
T Consensus 501 aClGGElWTiLrdRg~--------Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKk 569 (732)
T KOG0614|consen 501 ACLGGELWTILRDRGS--------FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKK 569 (732)
T ss_pred hhcCchhhhhhhhcCC--------cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHH
Confidence 9999999999986543 55555556889999999999998 999999999999999999999999999999
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
++....+ . .+||||+|.|
T Consensus 570 i~~g~KT-w-TFcGTpEYVA 587 (732)
T KOG0614|consen 570 IGSGRKT-W-TFCGTPEYVA 587 (732)
T ss_pred hccCCce-e-eecCCccccc
Confidence 9877764 3 4899999987
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.3e-21 Score=213.04 Aligned_cols=266 Identities=29% Similarity=0.328 Sum_probs=182.8
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 167 (693)
.+.++..|+.+....|.++.-. ...++|+.|+.++|.++...+.. --.+|+++++++|+++ .+|+.++.+.+
T Consensus 194 dls~~~~l~~l~c~rn~ls~l~-----~~g~~l~~L~a~~n~l~~~~~~p--~p~nl~~~dis~n~l~-~lp~wi~~~~n 265 (1081)
T KOG0618|consen 194 DLSNLANLEVLHCERNQLSELE-----ISGPSLTALYADHNPLTTLDVHP--VPLNLQYLDISHNNLS-NLPEWIGACAN 265 (1081)
T ss_pred hhhhccchhhhhhhhcccceEE-----ecCcchheeeeccCcceeecccc--ccccceeeecchhhhh-cchHHHHhccc
Confidence 3456666666666666654221 13566777777777766332221 1246777777777776 45577777777
Q ss_pred CCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccc-------------
Q 035786 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEV------------- 234 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~------------- 234 (693)
|+.|+..+|+++ .+|..+....+|+.|.+..|.+. -+|.....+++|+.|+|..|++.. .|+.+
T Consensus 266 le~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~-lp~~~l~v~~~~l~~ln~ 342 (1081)
T KOG0618|consen 266 LEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPS-LPDNFLAVLNASLNTLNV 342 (1081)
T ss_pred ceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccc-cchHHHhhhhHHHHHHhh
Confidence 777777777774 56777777777777777777775 456666667777777777777653 22211
Q ss_pred -------------cCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCC
Q 035786 235 -------------GNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG 301 (693)
Q Consensus 235 -------------~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g 301 (693)
..+..|+.|.+.+|.++...-+.+.+.++|+.|+|++|++. .+|...+.+++.|+.|+||+|+++
T Consensus 343 s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~- 420 (1081)
T KOG0618|consen 343 SSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT- 420 (1081)
T ss_pred hhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-
Confidence 12234667778888888777667788888888888888886 677777788888888888888887
Q ss_pred cCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccce-ecCC-CCCCCCCEEEccCCc
Q 035786 302 ALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYG-DLNS-SSFRKFSLIDLSSNY 369 (693)
Q Consensus 302 ~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g-~~~~-~~~~~l~~ldLs~N~ 369 (693)
.+|..+.+++.|++|...+|++. .+| .+..++.++++|+|.|+++- .+|. ...++|++|||++|.
T Consensus 421 ~Lp~tva~~~~L~tL~ahsN~l~-~fP--e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 421 TLPDTVANLGRLHTLRAHSNQLL-SFP--ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hhhHHHHhhhhhHHHhhcCCcee-ech--hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 56788888888888888888887 566 45677788888888888863 3343 223688888888886
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.4e-18 Score=171.66 Aligned_cols=147 Identities=24% Similarity=0.329 Sum_probs=128.8
Q ss_pred CCccCccccCCeeeEEEEEeCC-CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 514 FSETNLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
|+..+.||+|++|.||++...+ ++.+|+|.+..... ..+.+.+|++.+.+++|+|++++++++.. +...++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFED-PEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeec-CCceEEEEecc
Confidence 3456789999999999999865 88999999976543 35689999999999999999999998875 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++++|.+++..... .+++.....++.+++.++.|||.. +++|+|++++||+++.+..++++|||.++...
T Consensus 80 ~~~~L~~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~ 149 (225)
T smart00221 80 EGGDLFDYLRKKGG-------KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIH 149 (225)
T ss_pred CCCCHHHHHHhccc-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEec
Confidence 99999999975321 178999999999999999999988 99999999999999999999999999998874
Q ss_pred C
Q 035786 671 D 671 (693)
Q Consensus 671 ~ 671 (693)
.
T Consensus 150 ~ 150 (225)
T smart00221 150 R 150 (225)
T ss_pred C
Confidence 4
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.1e-19 Score=173.53 Aligned_cols=158 Identities=22% Similarity=0.318 Sum_probs=128.4
Q ss_pred CccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 518 NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
..+|.|+.|.|+|++.+ .|...|||.+...... .+.+.+.+.++.+-+ .|.||+.+|||.. +..+++-||.|.-
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~-n~dV~IcMelMs~- 175 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT-NTDVFICMELMST- 175 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee-CchHHHHHHHHHH-
Confidence 45999999999999975 5899999999654332 456788888887775 8999999999986 4678899999964
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCCC
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSH 673 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~~ 673 (693)
.++.+|.+-. .++...-.=++..-+.+||.||.+.+ +|||||+||+|||+|+.+++|++|||.+..+-++.
T Consensus 176 C~ekLlkrik-------~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk 246 (391)
T KOG0983|consen 176 CAEKLLKRIK-------GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK 246 (391)
T ss_pred HHHHHHHHhc-------CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccc
Confidence 6666666432 34666666778889999999998764 89999999999999999999999999998886666
Q ss_pred cceeeeeehhhhhhh
Q 035786 674 QNVLTRFLWRQLYQS 688 (693)
Q Consensus 674 ~~~~~~~~~~~~y~a 688 (693)
. .++-.|-+.|||
T Consensus 247 A--htrsAGC~~YMa 259 (391)
T KOG0983|consen 247 A--HTRSAGCAAYMA 259 (391)
T ss_pred c--cccccCCccccC
Confidence 5 345567788887
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-18 Score=169.42 Aligned_cols=139 Identities=12% Similarity=0.111 Sum_probs=105.7
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc-CHHHHHHHHHHHhcC-----CCCCccceeEEEEcCCC--eeE-
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF-KKESYMMELDLFSRV-----SHARLVPLLGQCLEHET--EKL- 584 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l-----~H~niv~l~g~~~~~~~--~~~- 584 (693)
++...+||+|+||.||+ ...++.. +||++..... ..+++.+|++++.++ .||||++++|++.+..+ ..+
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 45678999999999996 3233444 7998865432 356799999999999 57999999998875422 333
Q ss_pred EEEcc--CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHH-hhhccCCCCCeEecCCCCCCeeeCC----CCc
Q 035786 585 LVYKY--MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGL-SYLHHECNPPLVHRDVQASSILLDD----KFE 657 (693)
Q Consensus 585 lv~ey--~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl-~yLH~~~~p~iiHrDlk~~NILld~----~~~ 657 (693)
+|+|| +++|+|.+++.+. .++.. ..++.++..++ +|||++ +||||||||+|||++. +..
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~---------~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~ 147 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC---------RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVI 147 (210)
T ss_pred EEecCCCCcchhHHHHHHcc---------cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCc
Confidence 78999 6689999999642 14444 34567777777 999998 9999999999999974 347
Q ss_pred eEECC-cccccc
Q 035786 658 VRLGS-LSELHA 668 (693)
Q Consensus 658 ~ki~D-fgla~~ 668 (693)
++|.| ||....
T Consensus 148 ~~LiDg~G~~~~ 159 (210)
T PRK10345 148 PVVCDNIGESTF 159 (210)
T ss_pred EEEEECCCCcce
Confidence 99999 555444
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.2e-20 Score=196.31 Aligned_cols=163 Identities=21% Similarity=0.342 Sum_probs=137.7
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
+|.....+|.|.||.|||++. ..++.+|||.++..... ..-..+|+-+++..+|+|||.++|-+.. ....++.|||+
T Consensus 16 dyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr-~dklwicMEyc 94 (829)
T KOG0576|consen 16 DYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR-RDKLWICMEYC 94 (829)
T ss_pred chhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhh-hcCcEEEEEec
Confidence 466667899999999999985 57999999999865433 3445679999999999999999998764 45789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
.+|+|.+.-|.. .+|+..+...++....+|++|||.. +=+|||||=.|||+.+.+.+|++|||.+..++
T Consensus 95 gggslQdiy~~T--------gplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqit 163 (829)
T KOG0576|consen 95 GGGSLQDIYHVT--------GPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQIT 163 (829)
T ss_pred CCCcccceeeec--------ccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhh
Confidence 999999876642 3588888899999999999999998 77899999999999999999999999998886
Q ss_pred CCCcceeeeeehhhhhhh
Q 035786 671 DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~~~~~~~~~~y~a 688 (693)
.+-.. ...+.|||+|||
T Consensus 164 ati~K-rksfiGtpywma 180 (829)
T KOG0576|consen 164 ATIAK-RKSFIGTPYWMA 180 (829)
T ss_pred hhhhh-hhcccCCccccc
Confidence 55443 455889999975
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-19 Score=176.55 Aligned_cols=156 Identities=17% Similarity=0.233 Sum_probs=125.6
Q ss_pred CccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEc---CCCeeEEEEccCCC
Q 035786 518 NLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLE---HETEKLLVYKYMVC 592 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~---~~~~~~lv~ey~~~ 592 (693)
.+||-|-.|+|-.+.. .+|+.+|+|.+.... ..++|+++--.. .|||||+++..|-. ...-.++|||+|++
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meG 143 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDSP----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEG 143 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcCH----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccc
Confidence 6899999999999875 578999999985432 355688875444 69999999987732 22345789999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECCccccccc
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGSLSELHAQ 669 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~Dfgla~~~ 669 (693)
|.|...++.+.. ..++..+.-+|+.+|+.|+.|||.. .|.||||||+|+|-.. |-..|++|||+||.-
T Consensus 144 GeLfsriq~~g~------~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t 214 (400)
T KOG0604|consen 144 GELFSRIQDRGD------QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET 214 (400)
T ss_pred hHHHHHHHHccc------ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccccccccc
Confidence 999999976543 5689999999999999999999998 9999999999999974 567999999999986
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
..... ....|-||+|.|
T Consensus 215 ~~~~~--L~TPc~TPyYva 231 (400)
T KOG0604|consen 215 QEPGD--LMTPCFTPYYVA 231 (400)
T ss_pred CCCcc--ccCCcccccccC
Confidence 44322 445677788765
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-19 Score=182.95 Aligned_cols=163 Identities=19% Similarity=0.264 Sum_probs=130.4
Q ss_pred CCCccCccccCCeeeEEEEEeCC-CcEEEEEEecccccC----HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFK----KESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv 586 (693)
+|....+||+|+||+|..|..++ .+.+|||.++++-.- .+--+.|-++|+-- +-|.+|++.. |++.-+..|.|
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHS-cFQTmDRLyFV 428 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHS-CFQTMDRLYFV 428 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHH-HhhhhhheeeE
Confidence 58888999999999999998764 678999999764321 22234566677655 5778888876 55555689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+.+|+|--+++...+ +..+...-+|..||-||-|||+. +||+||||-.||+||.++.+||+|||+.
T Consensus 429 MEyvnGGDLMyhiQQ~Gk--------FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmc 497 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGK--------FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMC 497 (683)
T ss_pred EEEecCchhhhHHHHhcc--------cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccc
Confidence 999999999988876543 55556677999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+.---...+ ...+||||-|+|
T Consensus 498 KEni~~~~T-TkTFCGTPdYiA 518 (683)
T KOG0696|consen 498 KENIFDGVT-TKTFCGTPDYIA 518 (683)
T ss_pred cccccCCcc-eeeecCCCcccc
Confidence 985222222 234899999998
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.2e-20 Score=202.09 Aligned_cols=263 Identities=29% Similarity=0.400 Sum_probs=196.6
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
.+|++++++.|.++ .+|+|++. +.+|+.|+..+|.|+ .+|..+...++|+.|++..|.+. -+|+....+++|++||
T Consensus 241 ~nl~~~dis~n~l~-~lp~wi~~-~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLd 316 (1081)
T KOG0618|consen 241 LNLQYLDISHNNLS-NLPEWIGA-CANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLD 316 (1081)
T ss_pred ccceeeecchhhhh-cchHHHHh-cccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeee
Confidence 56788888888877 46777765 888888888888884 67777888888888888888887 5677777888888888
Q ss_pred ccCCCCCCcCchh-hhcCc-CCCeeecccccCCCcCcc-cccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCc
Q 035786 173 LSRNLLTGEIPNA-ISLLG-NLTRLNLASNFFTGQIPS-GLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNS 249 (693)
Q Consensus 173 Ls~N~l~~~~p~~-~~~l~-~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 249 (693)
|..|++. .+|.. +..+. .|..|+.+.|.+.. .|. .=...+.|+.|++.+|.++...-+.+.+..+|+.|+|++|+
T Consensus 317 L~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~-lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNr 394 (1081)
T KOG0618|consen 317 LQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLST-LPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNR 394 (1081)
T ss_pred ehhcccc-ccchHHHhhhhHHHHHHhhhhccccc-cccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccc
Confidence 8888887 44543 33333 26677777777652 331 11245678999999999998777778899999999999999
Q ss_pred CcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcc-cCC
Q 035786 250 ISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG-SWP 328 (693)
Q Consensus 250 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g-~~p 328 (693)
+.......+.++..|++|+||+|+++ .+|..+ .++..|++|...+|++. .+| .+..++.|+.+|+|.|+++- .+|
T Consensus 395 L~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tv-a~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~ 470 (1081)
T KOG0618|consen 395 LNSFPASKLRKLEELEELNLSGNKLT-TLPDTV-ANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLP 470 (1081)
T ss_pred cccCCHHHHhchHHhHHHhcccchhh-hhhHHH-HhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhh
Confidence 98666667889999999999999998 677665 78889999999999997 456 78889999999999999873 344
Q ss_pred ccCcCCCCCCcEEEccCCccceecCCC---CCCCCCEEEccCC
Q 035786 329 ILSTNGNASGAVFNISNNMLYGDLNSS---SFRKFSLIDLSSN 368 (693)
Q Consensus 329 ~~~~~~~~~l~~l~ls~N~l~g~~~~~---~~~~l~~ldLs~N 368 (693)
.. -..+.|++||+++|.. +.+... .++.+...|+.-|
T Consensus 471 ~~--~p~p~LkyLdlSGN~~-l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 471 EA--LPSPNLKYLDLSGNTR-LVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred hh--CCCcccceeeccCCcc-cccchhhhHHhhhhhheecccC
Confidence 21 1227899999999974 222222 2334445555555
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-19 Score=192.27 Aligned_cols=253 Identities=27% Similarity=0.295 Sum_probs=129.8
Q ss_pred CCCccEEEecCCCCCcC----CCcccCCCccCCEEecccCcCCc------cCccccCCCCCCCEEEccCCCCCCcCchhh
Q 035786 117 LPALQVLDLRSCSLSGS----IPGSFGNLSRLNVLYLSGNSLAG------NVPATLGELKKLSNLDLSRNLLTGEIPNAI 186 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 186 (693)
++.|++|++++|.++.. ++..+...++|++|+++++.+.+ .++..+..+++|++|++++|.+.+..+..+
T Consensus 22 l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~ 101 (319)
T cd00116 22 LLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVL 101 (319)
T ss_pred HhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHH
Confidence 55566666666665432 34445555556666666665542 223345556666666666666665555555
Q ss_pred hcCcC---CCeeecccccCCC----cCcccccCC-CCCCEEEccCCccccc----CCccccCCCCCCEEEccCCcCccc-
Q 035786 187 SLLGN---LTRLNLASNFFTG----QIPSGLYSL-SSIQFLNLSDNALTGF----IPSEVGNLDKLIELDLSKNSISGS- 253 (693)
Q Consensus 187 ~~l~~---L~~L~Ls~N~l~g----~~p~~~~~l-~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~- 253 (693)
..+.+ |++|++++|.+++ .+...+..+ ++|+.|++++|.+++. ++..+..+++|++|++++|.+++.
T Consensus 102 ~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 181 (319)
T cd00116 102 ESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAG 181 (319)
T ss_pred HHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHH
Confidence 44444 6666666666652 222333444 5666666666666532 223344555666666666666532
Q ss_pred ---CchhhhcCccccccccccccccccCCC---cccCCCCCCCEEEccCCcCCCcCccccc-----CCCCCCEEEccCCc
Q 035786 254 ---LPLELRGLRNLAKLVISENGLEGQLSE---GLFPTLDQLQVVDLSGNKLDGALPATLF-----LRPNLRFLDLSRNN 322 (693)
Q Consensus 254 ---~p~~~~~l~~L~~L~Ls~N~l~g~i~~---~~~~~l~~L~~L~Ls~N~l~g~~p~~l~-----~~~~L~~L~Ls~N~ 322 (693)
++..+..+++|++|++++|.+++.-.. ..+..+++|+.|++++|.+++.....+. ..+.|+.|++++|.
T Consensus 182 ~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~ 261 (319)
T cd00116 182 IRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCND 261 (319)
T ss_pred HHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCC
Confidence 223344445666666666665422111 1124455666666666666542222111 12566666666666
Q ss_pred Cc--cc--CCccCcCCCCCCcEEEccCCcccee----cCC--CCC-CCCCEEEccCCcc
Q 035786 323 IT--GS--WPILSTNGNASGAVFNISNNMLYGD----LNS--SSF-RKFSLIDLSSNYF 370 (693)
Q Consensus 323 l~--g~--~p~~~~~~~~~l~~l~ls~N~l~g~----~~~--~~~-~~l~~ldLs~N~l 370 (693)
++ |. +.. .......++.+++++|.+... +.. ... ..++.+|+.+|.|
T Consensus 262 i~~~~~~~l~~-~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 262 ITDDGAKDLAE-VLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CCcHHHHHHHH-HHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 65 11 111 112224556666666666532 111 112 4556666666543
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.4e-18 Score=169.80 Aligned_cols=157 Identities=22% Similarity=0.331 Sum_probs=134.8
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCC
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHET 581 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~ 581 (693)
....+....++-+|.||+||+|.|+ +.+.|-||.++.+..+ ...|..|-.++..+.|||+.+..|.|.+...
T Consensus 282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~ 361 (563)
T KOG1024|consen 282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA 361 (563)
T ss_pred hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC
Confidence 3344666778999999999999664 3467888988765544 4578999999999999999999999988667
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..+.+|.|+.-|+|+.||..++.......+.++..+...+|.|+|.|++|||.. +|||.||.++|+++|+..++|++
T Consensus 362 ~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVklt 438 (563)
T KOG1024|consen 362 TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLT 438 (563)
T ss_pred cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEec
Confidence 789999999999999999966543344457788899999999999999999998 99999999999999999999999
Q ss_pred Cccccccc
Q 035786 662 SLSELHAQ 669 (693)
Q Consensus 662 Dfgla~~~ 669 (693)
|=.+.|.+
T Consensus 439 DsaLSRDL 446 (563)
T KOG1024|consen 439 DSALSRDL 446 (563)
T ss_pred cchhcccc
Confidence 99999876
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.7e-18 Score=180.01 Aligned_cols=161 Identities=16% Similarity=0.186 Sum_probs=129.8
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHH---------HHHHHHHHHhcCC---CCCccceeEEEEcC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKE---------SYMMELDLFSRVS---HARLVPLLGQCLEH 579 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~---------~f~~Ei~~l~~l~---H~niv~l~g~~~~~ 579 (693)
+|...+.+|+|+||.|..|..+ +...|+||.+.+.+.-.. ..-.||++|+.++ |+||++++.++-+
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd- 640 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED- 640 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec-
Confidence 4677789999999999999975 467899999876442222 2446999999998 9999999998754
Q ss_pred CCeeEEEEcc-CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 580 ETEKLLVYKY-MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 580 ~~~~~lv~ey-~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
++..||++|- =++-+|.+++..+. .++....-.|..||+.|+++||.. +|||||||-+||.+|.++-+
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp--------~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~ 709 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKP--------RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFV 709 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccC--------ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeE
Confidence 5688999995 45779999997643 378888888999999999999998 99999999999999999999
Q ss_pred EECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+.|||-|.....+.- ..++||--|-|
T Consensus 710 klidfgsaa~~ksgpf---d~f~gtv~~aa 736 (772)
T KOG1152|consen 710 KLIDFGSAAYTKSGPF---DVFVGTVDYAA 736 (772)
T ss_pred EEeeccchhhhcCCCc---ceeeeeccccc
Confidence 9999999887633322 23555555543
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.3e-17 Score=161.87 Aligned_cols=140 Identities=26% Similarity=0.412 Sum_probs=124.6
Q ss_pred cccCCeeeEEEEEeCC-CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCChh
Q 035786 520 IKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLA 596 (693)
Q Consensus 520 ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~ 596 (693)
||+|.+|.||+++..+ ++.++||++...... .+.+.+|++.+.+++|++++++++++.. ....++++||+++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFED-ENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeec-CCeEEEEEecCCCCcHH
Confidence 6899999999999864 899999999765543 4679999999999999999999998875 36789999999999999
Q ss_pred hhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-CCceEECCcccccccC
Q 035786 597 SSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-KFEVRLGSLSELHAQG 670 (693)
Q Consensus 597 ~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~-~~~~ki~Dfgla~~~~ 670 (693)
+++.... ..+++..+..++.++++++.|||+. +++|+||+|.||+++. +..++++|||.+....
T Consensus 80 ~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~ 144 (215)
T cd00180 80 DLLKENE-------GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLT 144 (215)
T ss_pred HHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEcc
Confidence 9987532 2489999999999999999999998 9999999999999999 8999999999988763
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-18 Score=171.09 Aligned_cols=165 Identities=19% Similarity=0.254 Sum_probs=131.1
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRV-SHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 584 (693)
.++|...++||+|+|.+|..+++. ..+.+|+|.+++.-.. ..-...|-.++... +||.+|-+.. |++.+...+
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhs-cfqtesrlf 327 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHS-CFQTESRLF 327 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhh-hhcccceEE
Confidence 356888999999999999999974 5789999998754322 12223455555544 7999999986 555677899
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
.|.||+++|+|--++++.+ +|+.....-+...|.-||.|||+. +||+||+|-.|||+|..+.+|+.|+|
T Consensus 328 fvieyv~ggdlmfhmqrqr--------klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdyg 396 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQR--------KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYG 396 (593)
T ss_pred EEEEEecCcceeeehhhhh--------cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccc
Confidence 9999999999988887654 366666666888999999999999 99999999999999999999999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+.|.--...++ ...+||||-|+|
T Consensus 397 mcke~l~~gd~-tstfcgtpnyia 419 (593)
T KOG0695|consen 397 MCKEGLGPGDT-TSTFCGTPNYIA 419 (593)
T ss_pred hhhcCCCCCcc-cccccCCCcccc
Confidence 99985222222 234899999987
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-19 Score=191.85 Aligned_cols=259 Identities=22% Similarity=0.242 Sum_probs=178.0
Q ss_pred cccCCCCCEEEccCCCCCCc----CchHhhhCCCCccEEEecCCCCCc------CCCcccCCCccCCEEecccCcCCccC
Q 035786 89 LGNLTLLSSFNASGLSLPGS----IPEWFGYRLPALQVLDLRSCSLSG------SIPGSFGNLSRLNVLYLSGNSLAGNV 158 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g~----ip~~~~~~l~~L~~L~Ls~n~l~g------~~p~~~~~l~~L~~L~Ls~N~l~~~~ 158 (693)
+..++.|+.++++++.+... ++..+. ..+.|++|+++++.+.+ .++..+.++++|+.|+|++|.+.+..
T Consensus 19 ~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~-~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~ 97 (319)
T cd00116 19 LPKLLCLQVLRLEGNTLGEEAAKALASALR-PQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDG 97 (319)
T ss_pred HHHHhhccEEeecCCCCcHHHHHHHHHHHh-hCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhH
Confidence 34556688888888877543 444444 37778888888887762 23456677888888888888887666
Q ss_pred ccccCCCCC---CCEEEccCCCCCC----cCchhhhcC-cCCCeeecccccCCCc----CcccccCCCCCCEEEccCCcc
Q 035786 159 PATLGELKK---LSNLDLSRNLLTG----EIPNAISLL-GNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNAL 226 (693)
Q Consensus 159 p~~~~~l~~---L~~L~Ls~N~l~~----~~p~~~~~l-~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l 226 (693)
+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++. ++..+..+++|+.|++++|.+
T Consensus 98 ~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l 177 (319)
T cd00116 98 CGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGI 177 (319)
T ss_pred HHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCC
Confidence 666555554 8888888888873 233455566 7888888888888743 334556677888888888888
Q ss_pred ccc----CCccccCCCCCCEEEccCCcCccc----CchhhhcCccccccccccccccccCCCc----ccCCCCCCCEEEc
Q 035786 227 TGF----IPSEVGNLDKLIELDLSKNSISGS----LPLELRGLRNLAKLVISENGLEGQLSEG----LFPTLDQLQVVDL 294 (693)
Q Consensus 227 ~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~i~~~----~~~~l~~L~~L~L 294 (693)
++. ++..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++..... +....+.|+.|++
T Consensus 178 ~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l 257 (319)
T cd00116 178 GDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSL 257 (319)
T ss_pred chHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEc
Confidence 742 334455667888899988888743 3345567788999999998887522211 1123478999999
Q ss_pred cCCcCCC----cCcccccCCCCCCEEEccCCcCccc----CCccCcCCCCCCcEEEccCCcc
Q 035786 295 SGNKLDG----ALPATLFLRPNLRFLDLSRNNITGS----WPILSTNGNASGAVFNISNNML 348 (693)
Q Consensus 295 s~N~l~g----~~p~~l~~~~~L~~L~Ls~N~l~g~----~p~~~~~~~~~l~~l~ls~N~l 348 (693)
++|.++. .+...+..+++|+++++++|.++.. +..........+..+++.+|+|
T Consensus 258 ~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 258 SCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 9999872 3444556668899999999999843 2222222235778888888764
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.9e-18 Score=168.89 Aligned_cols=136 Identities=24% Similarity=0.357 Sum_probs=120.6
Q ss_pred CeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCChhhhhh
Q 035786 524 HSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLH 600 (693)
Q Consensus 524 ~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~ 600 (693)
+||.||+|+.. +|+.||+|++...... .+.|.+|++.+++++|+||+++.+++.. +...++|+||+++|+|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-EDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-CCEEEEEEeCCCCCCHHHHHH
Confidence 58999999986 4899999998754432 5789999999999999999999999875 467899999999999999986
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 601 RVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 601 ~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
... .+++.++..++.+++++++|||.. +|+|+||+|+||++++++.++++|||.+.....
T Consensus 80 ~~~--------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~ 139 (244)
T smart00220 80 KRG--------RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDP 139 (244)
T ss_pred hcc--------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecc
Confidence 532 289999999999999999999988 999999999999999999999999999988743
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.7e-18 Score=179.76 Aligned_cols=155 Identities=19% Similarity=0.281 Sum_probs=122.9
Q ss_pred cCHHHHHHHhCC---CCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCcccee
Q 035786 502 FTYEQLLRATGN---FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLL 573 (693)
Q Consensus 502 ~~~~~l~~at~~---~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~ 573 (693)
..|-.|.+|..+ |...+.||=|+||+|..+.. ++...+|.|.|.+... +......|-.+|+....+=||+|+
T Consensus 616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLy 695 (1034)
T KOG0608|consen 616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLY 695 (1034)
T ss_pred hhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEE
Confidence 445666666543 66778899999999999975 4466899998865432 234677899999999999999998
Q ss_pred EEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCH-HHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 574 GQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDW-ITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 574 g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~-~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
|.+..++..|.||||+++||+-.+|-+..- +.. ..|..| ..++.|+++.|.- ++|||||||.||||
T Consensus 696 -ySFQDkdnLYFVMdYIPGGDmMSLLIrmgI--------FeE~LARFYI-AEltcAiesVHkm---GFIHRDiKPDNILI 762 (1034)
T KOG0608|consen 696 -YSFQDKDNLYFVMDYIPGGDMMSLLIRMGI--------FEEDLARFYI-AELTCAIESVHKM---GFIHRDIKPDNILI 762 (1034)
T ss_pred -EEeccCCceEEEEeccCCccHHHHHHHhcc--------CHHHHHHHHH-HHHHHHHHHHHhc---cceecccCccceEE
Confidence 444556789999999999999998865321 222 345544 4689999999988 99999999999999
Q ss_pred CCCCceEECCccccccc
Q 035786 653 DDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~ 669 (693)
|.++.+|+.||||....
T Consensus 763 DrdGHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 763 DRDGHIKLTDFGLCTGF 779 (1034)
T ss_pred ccCCceeeeeccccccc
Confidence 99999999999997654
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-17 Score=164.49 Aligned_cols=134 Identities=18% Similarity=0.264 Sum_probs=113.0
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEEecccccC---------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---------KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+.||+|++|.||+|.. +|..|+||+....... .+.+.+|++++..++|++++....++.. ....++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD-PENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe-CCCCEEEEE
Confidence 4799999999999988 5778999976432211 2468889999999999999887777765 356789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++++|.+++.. ..+ ++..++.+++.+|+++|.. +++|||++|+||+++ +..++|.|||.++.
T Consensus 80 ~~~G~~L~~~~~~-----------~~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINS-----------NGM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHh-----------ccH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999998853 123 8889999999999999988 999999999999999 88999999999887
Q ss_pred c
Q 035786 669 Q 669 (693)
Q Consensus 669 ~ 669 (693)
.
T Consensus 144 ~ 144 (211)
T PRK14879 144 S 144 (211)
T ss_pred C
Confidence 4
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.6e-18 Score=177.60 Aligned_cols=162 Identities=20% Similarity=0.220 Sum_probs=132.9
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|+..+.||+||..+|||+.-.+.+.+|+|++...... ...|.+||+.|.+++ |.+||+|+.|=.. ++..||||||
T Consensus 363 Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-d~~lYmvmE~ 441 (677)
T KOG0596|consen 363 YEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-DGYLYMVMEC 441 (677)
T ss_pred hhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-CceEEEEeec
Confidence 5566789999999999999988899999988654333 467999999999995 9999999998775 5789999998
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
=+ -||..+|..... ...+| .+..|-.|+..++.++|.+ +|||.||||.|.|+- .|..|+.|||.|+.+
T Consensus 442 Gd-~DL~kiL~k~~~------~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 442 GD-IDLNKILKKKKS------IDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAI 509 (677)
T ss_pred cc-ccHHHHHHhccC------CCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhccc
Confidence 65 499999986543 34667 5667889999999999999 999999999999996 688999999999998
Q ss_pred C-CCCcceeeeeehhhhhhh
Q 035786 670 G-DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~-~~~~~~~~~~~~~~~y~a 688 (693)
. ++...+...-+||.-||+
T Consensus 510 ~~DTTsI~kdsQvGT~NYMs 529 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMS 529 (677)
T ss_pred CccccceeeccccCcccccC
Confidence 4 444434445567777764
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.7e-19 Score=181.12 Aligned_cols=273 Identities=22% Similarity=0.213 Sum_probs=141.3
Q ss_pred EEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEeccc-CcCCccCccccCCCCCCCEEEccC
Q 035786 97 SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSG-NSLAGNVPATLGELKKLSNLDLSR 175 (693)
Q Consensus 97 ~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~ 175 (693)
.+.|..|.++ .||+..+..+++|+.||||+|+|+.+-|++|..+.+|..|-+.+ |+|+...-..|++|..|+.|.+.-
T Consensus 71 eirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNa 149 (498)
T KOG4237|consen 71 EIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNA 149 (498)
T ss_pred EEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcCh
Confidence 4555555554 45544444566666666666666666666666666665555544 666644445666666666666666
Q ss_pred CCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCccc------------ccCCccccCCCCCCEE
Q 035786 176 NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT------------GFIPSEVGNLDKLIEL 243 (693)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~------------g~~p~~~~~l~~L~~L 243 (693)
|++.-...+.|..+++|..|.+..|.+...--..+..+.+++.+.+..|.+- ...|.+++...-....
T Consensus 150 n~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~ 229 (498)
T KOG4237|consen 150 NHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPY 229 (498)
T ss_pred hhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchH
Confidence 6666555566666666666666666665222225566666666666666521 1122223322222222
Q ss_pred EccCCcCcccCchhhhc-CccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCc
Q 035786 244 DLSKNSISGSLPLELRG-LRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNN 322 (693)
Q Consensus 244 ~Ls~N~l~g~~p~~~~~-l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~ 322 (693)
.+.++++...-+..|.. +..+..=..+.....+.-|..-|..+++|+.|+|++|++++.-+.+|.....++.|.|..|+
T Consensus 230 rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~ 309 (498)
T KOG4237|consen 230 RLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNK 309 (498)
T ss_pred HHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcch
Confidence 22222222111111110 00111111111122233344445566666666666666666666666666666666666666
Q ss_pred CcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcce
Q 035786 323 ITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQ 371 (693)
Q Consensus 323 l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~ 371 (693)
|. .+....+.++..|+.|+|.+|+++.--|. ..+..|..|+|-.|.|.
T Consensus 310 l~-~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 310 LE-FVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred HH-HHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 64 22223445555666666666666554442 23334555666666554
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-17 Score=161.68 Aligned_cols=144 Identities=15% Similarity=0.122 Sum_probs=111.3
Q ss_pred HHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC-----------------------HHHHHHHHHHHh
Q 035786 506 QLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK-----------------------KESYMMELDLFS 562 (693)
Q Consensus 506 ~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~-----------------------~~~f~~Ei~~l~ 562 (693)
++.+.-..+...+.||+|+||.||+|..++|+.||||++...... ...+.+|..++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 344433346667899999999999999888999999986542210 123677999999
Q ss_pred cCCCCC--ccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCe
Q 035786 563 RVSHAR--LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPL 640 (693)
Q Consensus 563 ~l~H~n--iv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~i 640 (693)
++.|++ +.+.++. ...++||||+++++|.+.... ....+++.+++.++.++|+. +|
T Consensus 89 ~l~~~~i~v~~~~~~-----~~~~lv~e~~~g~~L~~~~~~--------------~~~~~~~~~i~~~l~~lh~~---gi 146 (198)
T cd05144 89 ALYEEGFPVPKPIDW-----NRHAVVMEYIDGVELYRVRVL--------------EDPEEVLDEILEEIVKAYKH---GI 146 (198)
T ss_pred HHHHcCCCCCceeec-----CCceEEEEEeCCcchhhcccc--------------ccHHHHHHHHHHHHHHHHHC---CC
Confidence 998884 4444331 345899999999999765321 12356888999999999987 99
Q ss_pred EecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 641 VHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 641 iHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+||||||+||+++++++++|.|||++.....
T Consensus 147 ~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 147 IHGDLSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence 9999999999999999999999999876544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-17 Score=166.09 Aligned_cols=142 Identities=15% Similarity=0.148 Sum_probs=109.8
Q ss_pred CCccCccccCCeeeEEEEE--eCCCcEEEEEEecccccC-------------------------HHHHHHHHHHHhcCCC
Q 035786 514 FSETNLIKKGHSGDLFKGT--LAGGTTVVVKKVSLHSFK-------------------------KESYMMELDLFSRVSH 566 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~--~~~g~~vavK~l~~~~~~-------------------------~~~f~~Ei~~l~~l~H 566 (693)
|...+.||+|+||.||+|. ..+|+.||||.+...... ...+.+|++.+.++.|
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 5566789999999999998 568999999988643210 1235689999999986
Q ss_pred CCc--cceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCC-eEec
Q 035786 567 ARL--VPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPP-LVHR 643 (693)
Q Consensus 567 ~ni--v~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~-iiHr 643 (693)
..+ .+.++ . ...++||||+++++|..+.... ..++..+...++.+++.++.|||.. + |+||
T Consensus 110 ~~i~~p~~~~--~---~~~~lV~E~~~g~~L~~~~~~~--------~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~ 173 (237)
T smart00090 110 AGVPVPKPIA--W---RRNVLVMEFIGGDGLPAPRLKD--------VEPEEEEEFELYDDILEEMRKLYKE---GELVHG 173 (237)
T ss_pred cCCCCCeeeE--e---cCceEEEEEecCCccccccccc--------CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeC
Confidence 443 33333 2 2358999999999887654221 1244556678999999999999998 8 9999
Q ss_pred CCCCCCeeeCCCCceEECCcccccccCCC
Q 035786 644 DVQASSILLDDKFEVRLGSLSELHAQGDS 672 (693)
Q Consensus 644 Dlk~~NILld~~~~~ki~Dfgla~~~~~~ 672 (693)
||||+||+++ ++++++.|||.++..+..
T Consensus 174 Dikp~NIli~-~~~i~LiDFg~a~~~~~~ 201 (237)
T smart00090 174 DLSEYNILVH-DGKVVIIDVSQSVELDHP 201 (237)
T ss_pred CCChhhEEEE-CCCEEEEEChhhhccCCc
Confidence 9999999999 889999999999876443
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.4e-17 Score=186.53 Aligned_cols=137 Identities=23% Similarity=0.255 Sum_probs=111.2
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEE-eccc-c-------cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKK-VSLH-S-------FKKESYMMELDLFSRVSHARLVPLLGQCLEHETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~-l~~~-~-------~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 582 (693)
..|...+.||+|+||.||+|.+.+.. +++|+ +... . ...+.+.+|++++.+++|++++....++.+ +..
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-~~~ 410 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD-PEE 410 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe-CCC
Confidence 34566789999999999999986544 44443 2211 1 013568899999999999999988887775 356
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||+++++|.+++. .+.+++.+++++|.|||+. +|+|||+||+|||+ ++..++|.|
T Consensus 411 ~~lv~E~~~g~~L~~~l~----------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liD 470 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE----------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLID 470 (535)
T ss_pred CEEEEEecCCCcHHHHHH----------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEe
Confidence 789999999999998774 3467899999999999988 99999999999999 678999999
Q ss_pred cccccccC
Q 035786 663 LSELHAQG 670 (693)
Q Consensus 663 fgla~~~~ 670 (693)
||+++...
T Consensus 471 FGla~~~~ 478 (535)
T PRK09605 471 FGLGKYSD 478 (535)
T ss_pred CcccccCC
Confidence 99998853
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.2e-18 Score=160.03 Aligned_cols=143 Identities=17% Similarity=0.306 Sum_probs=119.7
Q ss_pred CCCccCccccCCeeeEEEEE-eCCCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCCccceeEEEEcCC-CeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HARLVPLLGQCLEHE-TEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~-~~~~lv~ey 589 (693)
+|+..+.+|+|.|.+||.|. ..+.+.++||.++. ...+...+|+.++..++ |||||+|+....+.. ....||+||
T Consensus 39 dYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP--VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~ 116 (338)
T KOG0668|consen 39 DYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP--VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEY 116 (338)
T ss_pred hHHHHHHHcCccHhhHhcccccCCCceEEEeeech--HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhh
Confidence 45566789999999999998 56788999999965 33467899999999997 999999998876532 245799999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEECCcccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLGSLSELHA 668 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~Dfgla~~ 668 (693)
+.|-+.+..-. .|+-.....+..++.+||.|.|+. +|+|||+||.||++|.. -+.++.|+|+|.+
T Consensus 117 v~n~Dfk~ly~-----------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEF 182 (338)
T KOG0668|consen 117 VNNTDFKQLYP-----------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 182 (338)
T ss_pred hccccHHHHhh-----------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhh
Confidence 99988876542 366666677899999999999998 99999999999999965 6899999999999
Q ss_pred cCC
Q 035786 669 QGD 671 (693)
Q Consensus 669 ~~~ 671 (693)
+..
T Consensus 183 YHp 185 (338)
T KOG0668|consen 183 YHP 185 (338)
T ss_pred cCC
Confidence 843
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.4e-19 Score=160.92 Aligned_cols=158 Identities=30% Similarity=0.502 Sum_probs=96.0
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+.+.+.|.||+|+++ .+|+.+.++.+|+.|++++|+++ .+|.+++.+++|+.|+++-|++. .+|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 444455555555555 34555555666666666666655 45555666666666666666554 4566666666666666
Q ss_pred cccccCCC-cCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc
Q 035786 197 LASNFFTG-QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 197 Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
|..|++.. .+|..|..++.|+.|+|++|.|. .+|..++++++|+.|.+..|.+- .+|.+++.++.|++|.+.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 66665542 35666666666666666666665 55666666666666666666665 46666777777777777777766
Q ss_pred ccCCC
Q 035786 276 GQLSE 280 (693)
Q Consensus 276 g~i~~ 280 (693)
.+|+
T Consensus 187 -vlpp 190 (264)
T KOG0617|consen 187 -VLPP 190 (264)
T ss_pred -ecCh
Confidence 3443
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.5e-18 Score=166.75 Aligned_cols=158 Identities=21% Similarity=0.294 Sum_probs=125.5
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----CeeE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHE-----TEKL 584 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~~ 584 (693)
|.....+|.|.- .|..|.. -.++.||+|++...- ...++-.+|..++..+.|+||++++.++...+ .+.|
T Consensus 19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y 97 (369)
T KOG0665|consen 19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVY 97 (369)
T ss_pred eeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHH
Confidence 344456777766 4444432 247899999986431 22456778999999999999999999875322 2578
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+|||||. ++|...++. .+|..+.-.|..|+..|+.|||.. +|+||||||+||++..+...||.|||
T Consensus 98 ~v~e~m~-~nl~~vi~~----------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 98 LVMELMD-ANLCQVILM----------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred HHHHhhh-hHHHHHHHH----------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccch
Confidence 9999997 589888873 377888889999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|+..+.. -.+|.+++|++|+|
T Consensus 164 ~ar~e~~~--~~mtpyVvtRyyra 185 (369)
T KOG0665|consen 164 LARTEDTD--FMMTPYVVTRYYRA 185 (369)
T ss_pred hhcccCcc--cccCchhheeeccC
Confidence 99987544 34777888888877
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.6e-17 Score=159.09 Aligned_cols=130 Identities=21% Similarity=0.250 Sum_probs=106.7
Q ss_pred ccccCCeeeEEEEEeCCCcEEEEEEeccccc---------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 519 LIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF---------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~---------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+||+|+||.||+|.+ +|..|+||+...... ..+++.+|++++..++|+++.....++.. ++..++||||
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD-PDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE-CCCCEEEEEE
Confidence 489999999999996 578899998643211 12467889999999999887666656654 3567899999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++++|.+++.... . .++.+++++|+++|.. +++|||+||.||+++ ++++++.|||+++..
T Consensus 79 ~~g~~l~~~~~~~~---------~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 79 IEGKPLKDVIEEGN---------D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred ECCccHHHHHhhcH---------H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999998875311 0 7899999999999988 999999999999999 899999999998875
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.1e-17 Score=159.69 Aligned_cols=146 Identities=18% Similarity=0.313 Sum_probs=121.8
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
|...+.+|+|.||.+-.+..+ ..+.+++|.+.......++|.+|..-=-.+ .|.|||.-+...++..+....++||+|
T Consensus 26 y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP 105 (378)
T KOG1345|consen 26 YTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAP 105 (378)
T ss_pred hhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCc
Confidence 666788999999999999975 477899999987666678899998765555 589999988877776666778999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-C-CCceEECCccccccc
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-D-KFEVRLGSLSELHAQ 669 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~-~~~~ki~Dfgla~~~ 669 (693)
.|||..-+.. .-+....-.+++.|++.|++|+|+. .+||||||.+|||+- . ...+|++|||+.+..
T Consensus 106 ~gdL~snv~~---------~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 106 RGDLRSNVEA---------AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred cchhhhhcCc---------ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccccc
Confidence 9999876643 2366777788999999999999998 999999999999994 3 458999999998876
Q ss_pred CC
Q 035786 670 GD 671 (693)
Q Consensus 670 ~~ 671 (693)
+.
T Consensus 174 g~ 175 (378)
T KOG1345|consen 174 GT 175 (378)
T ss_pred Cc
Confidence 44
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2e-17 Score=181.76 Aligned_cols=163 Identities=20% Similarity=0.331 Sum_probs=119.8
Q ss_pred CCCccCccccCCee-eEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcC-CCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSG-DLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEH-ETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G-~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~-~~~~~lv~ey 589 (693)
-|...+++|.|+-| .||+|.++ |+.||||++-.... .-..+||..+..- +|||||+++ |.+. +...|+..|.
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~~--~~A~rEi~lL~eSD~H~NviRyy--c~E~d~qF~YIalEL 584 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEFF--DFAQREIQLLQESDEHPNVIRYY--CSEQDRQFLYIALEL 584 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHhH--HHHHHHHHHHHhccCCCceEEEE--eeccCCceEEEEehH
Confidence 36667889999988 68999996 78999999854332 2235799998877 699999996 5543 3578999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---C--CceEECCcc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---K--FEVRLGSLS 664 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~--~~~ki~Dfg 664 (693)
|.. +|.+++..... +...... ..-..+..|++.|+++||.- .||||||||.||||+. + ..|+|+|||
T Consensus 585 C~~-sL~dlie~~~~-d~~~~~~---i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfg 656 (903)
T KOG1027|consen 585 CAC-SLQDLIESSGL-DVEMQSD---IDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFG 656 (903)
T ss_pred hhh-hHHHHHhcccc-chhhccc---ccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccc
Confidence 975 99999976411 1111111 22345778899999999996 9999999999999986 2 579999999
Q ss_pred cccccCCCCcc--eeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQN--VLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~--~~~~~~~~~~y~a 688 (693)
+.|.+...... .....-||-.|+|
T Consensus 657 lsKkl~~~~sS~~r~s~~sGt~GW~A 682 (903)
T KOG1027|consen 657 LSKKLAGGKSSFSRLSGGSGTSGWQA 682 (903)
T ss_pred cccccCCCcchhhcccCCCCcccccC
Confidence 99998433222 2333557777766
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-16 Score=154.06 Aligned_cols=131 Identities=15% Similarity=0.081 Sum_probs=105.0
Q ss_pred CccCccccCCeeeEEEEEeCCCcEEEEEEecccccC-----HHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEEc
Q 035786 515 SETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK-----KESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~-----~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~e 588 (693)
.....+++|+||+||.+.- ++..++.+.++....- ..-|.+|+++|.+++ |+++++++++ +..+++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~-----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW-----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE-----cCEEEEEe
Confidence 3456899999999997765 6788888888654432 225889999999995 5789998875 24699999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCC-CCCCeeeCCCCceEECCccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDV-QASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDl-k~~NILld~~~~~ki~Dfgla~ 667 (693)
|+++.+|.+.+.. ....+..++++++.|+|.. +|+|||| ||.|||+++++.++|.|||+|.
T Consensus 79 yI~G~~L~~~~~~---------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~ 140 (218)
T PRK12274 79 YLAGAAMYQRPPR---------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAV 140 (218)
T ss_pred eecCccHHhhhhh---------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCce
Confidence 9999988653311 0134677889999999998 9999999 7999999999999999999998
Q ss_pred cc
Q 035786 668 AQ 669 (693)
Q Consensus 668 ~~ 669 (693)
..
T Consensus 141 ~~ 142 (218)
T PRK12274 141 RG 142 (218)
T ss_pred ec
Confidence 64
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-18 Score=157.69 Aligned_cols=157 Identities=30% Similarity=0.484 Sum_probs=81.4
Q ss_pred cccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCC
Q 035786 89 LGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKL 168 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 168 (693)
+.++.+.+.|.+|.|.++ .+|+.+.. |.+|+.|++++|++. .+|.+++.+++|+.|+++-|++. ..|..|+.++.|
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~-l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAE-LKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHH-hhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 334444444555555544 34444442 555555555555554 34555555555555555555554 445555555555
Q ss_pred CEEEccCCCCCC-cCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 035786 169 SNLDLSRNLLTG-EIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK 247 (693)
Q Consensus 169 ~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 247 (693)
+.|||.+|++.. .+|..|..+..|+.|+|+.|.|. .+|..++++++|+.|.+.+|.+- .+|.+++.++.|++|.+.+
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccc
Confidence 555555555442 34555555555555555555554 44555555555555555555554 3455555555555555555
Q ss_pred CcCc
Q 035786 248 NSIS 251 (693)
Q Consensus 248 N~l~ 251 (693)
|+++
T Consensus 183 nrl~ 186 (264)
T KOG0617|consen 183 NRLT 186 (264)
T ss_pred ceee
Confidence 5554
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.8e-16 Score=177.18 Aligned_cols=141 Identities=35% Similarity=0.577 Sum_probs=91.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCCC-CCCCCCCCCCC----CCcceeecCCCEeEEEcCCCCcccccccCCccCccccccCCC
Q 035786 20 PLDSAVQRSALLDLRSSLGLRS-RDWPLRTEPCR----SWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTL 94 (693)
Q Consensus 20 ~~~~~~~~~aLl~~k~~l~~~~-~~W~~~~~~C~----~W~gv~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~ 94 (693)
..+.++|.+||+.+|+++.... .+|+ .++|+ .|.||.|+....+ ....
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~~~W~--g~~C~p~~~~w~Gv~C~~~~~~-------------------------~~~~ 419 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLRFGWN--GDPCVPQQHPWSGADCQFDSTK-------------------------GKWF 419 (623)
T ss_pred cccCchHHHHHHHHHHhcCCcccCCCC--CCCCCCcccccccceeeccCCC-------------------------CceE
Confidence 3456689999999999997543 3796 36774 6999999521000 0001
Q ss_pred CCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEcc
Q 035786 95 LSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLS 174 (693)
Q Consensus 95 L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 174 (693)
++.|+|++|.+.|.+|+.++. +++|+.|+|++|.++|.+|..++++++|+.|+|++|+++|.+|+.++++++|++|+|+
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~-L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISK-LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEECCCCCccccCCHHHhC-CCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 344555666666677766653 6777777777777766666666666666666666666666666666666666666666
Q ss_pred CCCCCCcCchhhhc
Q 035786 175 RNLLTGEIPNAISL 188 (693)
Q Consensus 175 ~N~l~~~~p~~~~~ 188 (693)
+|.++|.+|..+..
T Consensus 499 ~N~l~g~iP~~l~~ 512 (623)
T PLN03150 499 GNSLSGRVPAALGG 512 (623)
T ss_pred CCcccccCChHHhh
Confidence 66666666655543
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.7e-16 Score=155.03 Aligned_cols=139 Identities=14% Similarity=0.131 Sum_probs=112.4
Q ss_pred HhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHH----H------HHHHHHHHhcCCCCCccceeEEEEcC
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKE----S------YMMELDLFSRVSHARLVPLLGQCLEH 579 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~----~------f~~Ei~~l~~l~H~niv~l~g~~~~~ 579 (693)
..++|...+++|+|+||.||.... ++..+|||.+.......+ . |.+|++.+.+++|++|..+..++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 356788999999999999999766 567899999864332221 2 68999999999999999998886532
Q ss_pred C-------CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 580 E-------TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 580 ~-------~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
. ...+|||||+++.+|.++.. ++. ....+++.++..+|.. +++|||+||+||++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~------------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili 168 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE------------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIV 168 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh------------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEE
Confidence 1 34789999999999987631 221 2455889999999998 99999999999999
Q ss_pred CCCCceEECCccccccc
Q 035786 653 DDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~ 669 (693)
++++ +++.|||..+..
T Consensus 169 ~~~g-i~liDfg~~~~~ 184 (232)
T PRK10359 169 SKNG-LRIIDLSGKRCT 184 (232)
T ss_pred eCCC-EEEEECCCcccc
Confidence 9888 999999987765
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.3e-18 Score=172.44 Aligned_cols=276 Identities=24% Similarity=0.244 Sum_probs=169.2
Q ss_pred EeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecC-CCCCcCCCcccCCCc
Q 035786 64 VIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRS-CSLSGSIPGSFGNLS 142 (693)
Q Consensus 64 v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~-n~l~g~~p~~~~~l~ 142 (693)
.|.|+|.... +-.+|+ ..++.+++|+.||||.|.++---|..|.. |++|..|-+.+ |+|+......|++|.
T Consensus 69 tveirLdqN~---I~~iP~----~aF~~l~~LRrLdLS~N~Is~I~p~AF~G-L~~l~~Lvlyg~NkI~~l~k~~F~gL~ 140 (498)
T KOG4237|consen 69 TVEIRLDQNQ---ISSIPP----GAFKTLHRLRRLDLSKNNISFIAPDAFKG-LASLLSLVLYGNNKITDLPKGAFGGLS 140 (498)
T ss_pred ceEEEeccCC---cccCCh----hhccchhhhceecccccchhhcChHhhhh-hHhhhHHHhhcCCchhhhhhhHhhhHH
Confidence 4555555432 234444 47889999999999999998777887764 88887776665 999977677899999
Q ss_pred cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCch-hhhcCcCCCeeecccccCC------------CcCccc
Q 035786 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPN-AISLLGNLTRLNLASNFFT------------GQIPSG 209 (693)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~------------g~~p~~ 209 (693)
.|+.|.+.-|++.-...+.|..|++|..|.+.+|.+. .++. ++..+.+++.+.+..|.+. -..|..
T Consensus 141 slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ie 219 (498)
T KOG4237|consen 141 SLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIE 219 (498)
T ss_pred HHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhh
Confidence 9999999999999888889999999999999999988 4454 8889999999999998842 122333
Q ss_pred ccCCCCCCEEEccCCcccccCCccccCCCCCCEE--Ecc-CCcCcccCc-hhhhcCccccccccccccccccCCCcccCC
Q 035786 210 LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIEL--DLS-KNSISGSLP-LELRGLRNLAKLVISENGLEGQLSEGLFPT 285 (693)
Q Consensus 210 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L--~Ls-~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~ 285 (693)
++...-..-..+.++++...-+..|... ++.+ .++ .....+..| ..|.++++|++|+|++|+++ .|.+..|..
T Consensus 220 tsgarc~~p~rl~~~Ri~q~~a~kf~c~--~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~-~i~~~aFe~ 296 (498)
T KOG4237|consen 220 TSGARCVSPYRLYYKRINQEDARKFLCS--LESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKIT-RIEDGAFEG 296 (498)
T ss_pred cccceecchHHHHHHHhcccchhhhhhh--HHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccc-hhhhhhhcc
Confidence 3333333333333333322222212111 1111 111 111112222 23555555555555555555 233444555
Q ss_pred CCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceec
Q 035786 286 LDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDL 352 (693)
Q Consensus 286 l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~ 352 (693)
+..++.|.|..|++...-...|..+..|+.|+|.+|+|+..-| ..+....+|..|+|-.|.|.+++
T Consensus 297 ~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~-~aF~~~~~l~~l~l~~Np~~CnC 362 (498)
T KOG4237|consen 297 AAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAP-GAFQTLFSLSTLNLLSNPFNCNC 362 (498)
T ss_pred hhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEec-ccccccceeeeeehccCcccCcc
Confidence 5555555555555554444444455555555555555554444 23445555556666666655544
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.8e-16 Score=145.93 Aligned_cols=172 Identities=17% Similarity=0.262 Sum_probs=127.7
Q ss_pred CHHHHHHHhCCCCccCccccCCeeeEEEEE-eCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCC
Q 035786 503 TYEQLLRATGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581 (693)
Q Consensus 503 ~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~ 581 (693)
+.+++..+ ++|...+.||.|+||.+|.|. ..+|+.||||.-+.... ..+...|.++..-++|--=++-+-++.....
T Consensus 7 s~~~~iv~-gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ 84 (341)
T KOG1163|consen 7 SLEELIVG-GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-HPQLLYESKVYRILQGGVGIPHIRHYGTEKD 84 (341)
T ss_pred chhhheec-cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-CcchhHHHHHHHHhccCCCCchhhhhccccc
Confidence 34444443 457888999999999999998 57899999998654333 3346778888888887553333333433345
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC---CCCce
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD---DKFEV 658 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld---~~~~~ 658 (693)
...||||.. +-||+++..-+. +.++..+.+-.|-|+..-++|+|.. .+|||||||.|.|.. .....
T Consensus 85 ynvlVMdLL-GPsLEdLfnfC~-------R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl 153 (341)
T KOG1163|consen 85 YNVLVMDLL-GPSLEDLFNFCS-------RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKL 153 (341)
T ss_pred cceeeeecc-CccHHHHHHHHh-------hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceE
Confidence 667999987 569999887554 3478889999999999999999998 899999999999997 34578
Q ss_pred EECCcccccccCCC----Ccce--eeeeehhhhhh
Q 035786 659 RLGSLSELHAQGDS----HQNV--LTRFLWRQLYQ 687 (693)
Q Consensus 659 ki~Dfgla~~~~~~----~~~~--~~~~~~~~~y~ 687 (693)
.+.|||+||.+.+. |... .+...||-.|-
T Consensus 154 ~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYA 188 (341)
T KOG1163|consen 154 YLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYA 188 (341)
T ss_pred EEEeccchhhhccccccccCccccCCccceeeeeh
Confidence 99999999998432 2221 22356777763
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.4e-16 Score=167.03 Aligned_cols=146 Identities=19% Similarity=0.174 Sum_probs=118.5
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEc
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++.|.....+|.|+|+.|-++.. ++++..|||.+..... +-.+|+.++... .|+||+++.+.|.+ ..+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~---~~~~e~~~~~~~~~h~niv~~~~v~~~-~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD---DNQDEIPISLLVRDHPNIVKSHDVYED-GKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc---ccccccchhhhhcCCCcceeecceecC-Cceeeeeeh
Confidence 33455556699999999999885 5688999999976522 233477666665 69999999999875 468999999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee-CCCCceEECCccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL-DDKFEVRLGSLSELH 667 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl-d~~~~~ki~Dfgla~ 667 (693)
++.+|-+.+.+.... ..-..+..|+.+++.++.|||.+ +|||||+||+|||+ ++.+.++|+|||.++
T Consensus 397 ~l~g~ell~ri~~~~---------~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~ 464 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKP---------EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWS 464 (612)
T ss_pred hccccHHHHHHHhcc---------hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhh
Confidence 999998887776432 22266778999999999999998 99999999999999 588999999999999
Q ss_pred ccCCC
Q 035786 668 AQGDS 672 (693)
Q Consensus 668 ~~~~~ 672 (693)
.....
T Consensus 465 ~~~~~ 469 (612)
T KOG0603|consen 465 ELERS 469 (612)
T ss_pred hCchh
Confidence 98554
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.62 E-value=7.4e-16 Score=158.25 Aligned_cols=143 Identities=18% Similarity=0.226 Sum_probs=121.2
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC----CCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeE
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA----GGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~----~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~ 584 (693)
..+.|...++||+|.|++||+|+.. ..+.||+|.+...+. .....+|+++|..+. |.||+++.++.. ..+.+.
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-p~ri~~El~~L~~~gG~~ni~~~~~~~r-nnd~v~ 111 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-PSRILNELEMLYRLGGSDNIIKLNGCFR-NNDQVA 111 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-chHHHHHHHHHHHhccchhhhcchhhhc-cCCeeE
Confidence 4456788899999999999999853 367899999875443 345889999999994 899999998554 456899
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-CCceEECCc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-KFEVRLGSL 663 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~-~~~~ki~Df 663 (693)
+|+||++.-+..++... ++.+....+......||.|+|++ +||||||||+|+|.+. ...-.|.||
T Consensus 112 ivlp~~~H~~f~~l~~~-----------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDF 177 (418)
T KOG1167|consen 112 IVLPYFEHDRFRDLYRS-----------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDF 177 (418)
T ss_pred EEecccCccCHHHHHhc-----------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEec
Confidence 99999999998888753 67778888999999999999999 9999999999999984 467889999
Q ss_pred ccccc
Q 035786 664 SELHA 668 (693)
Q Consensus 664 gla~~ 668 (693)
|+|-.
T Consensus 178 gLA~~ 182 (418)
T KOG1167|consen 178 GLAQR 182 (418)
T ss_pred hhHHH
Confidence 99984
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.1e-15 Score=148.78 Aligned_cols=136 Identities=19% Similarity=0.205 Sum_probs=98.6
Q ss_pred cCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHH----------------------HHHHHHHhcCCCCC--c
Q 035786 517 TNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESY----------------------MMELDLFSRVSHAR--L 569 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f----------------------~~Ei~~l~~l~H~n--i 569 (693)
.+.||+|+||.||+|...+|+.||||.+...... ...+ ..|.+.+.++++.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 3579999999999999888999999987643211 1111 35666666665543 3
Q ss_pred cceeEEEEcCCCeeEEEEccCCCCChhhh-hhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc-CCCCCeEecCCCC
Q 035786 570 VPLLGQCLEHETEKLLVYKYMVCGDLASS-LHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH-ECNPPLVHRDVQA 647 (693)
Q Consensus 570 v~l~g~~~~~~~~~~lv~ey~~~GsL~~~-l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~-~~~p~iiHrDlk~ 647 (693)
.+.+++ ...++||||+++|.+... +.... .. .+..+++.+++.++.++|. . +|+||||||
T Consensus 82 ~~~~~~-----~~~~lv~e~~~g~~~~~~~l~~~~---------~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p 143 (187)
T cd05119 82 PKPIDL-----NRHVLVMEFIGGDGIPAPRLKDVR---------LL-EDPEELYDQILELMRKLYREA---GLVHGDLSE 143 (187)
T ss_pred CceEec-----CCCEEEEEEeCCCCccChhhhhhh---------hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCCh
Confidence 333321 235899999999665321 11100 11 4567899999999999998 5 899999999
Q ss_pred CCeeeCCCCceEECCcccccccCC
Q 035786 648 SSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 648 ~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+||+++ ++.+++.|||.+.....
T Consensus 144 ~Nili~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 144 YNILVD-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred hhEEEE-CCcEEEEECcccccccC
Confidence 999999 99999999999987643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.4e-15 Score=137.69 Aligned_cols=135 Identities=17% Similarity=0.112 Sum_probs=113.0
Q ss_pred cCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCC--CCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 517 TNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSH--ARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
.+.||+|.++.||+++..+ ..++||....... ..++.+|++++..++| ..+.+++++... ++..++++||++++.
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~-~~~~~~v~e~~~g~~ 79 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGES-DGWSYLLMEWIEGET 79 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC-CCccEEEEEecCCee
Confidence 4679999999999999865 7899998865433 5679999999999987 488888876643 357899999999877
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+..+ ++..+..++.+++++++++|....++++|+|+||+||++++...+++.|||.++..
T Consensus 80 ~~~~---------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 80 LDEV---------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred cccC---------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 6532 56677889999999999999875568999999999999999899999999998864
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.1e-15 Score=146.72 Aligned_cols=162 Identities=17% Similarity=0.202 Sum_probs=122.3
Q ss_pred CCCccCccccCCeeeEEEEE-eCCCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCCccceeEEEEcC-CCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HARLVPLLGQCLEH-ETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~-~~~~~lv~ey 589 (693)
+|...+.||+|+||+.+.|+ +-+++.||||.-...+. ..+...|-+..+-+. -+.|... ||+.. +....||+|.
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~-APQLrdEYr~YKlL~g~~GIP~v--YYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE-APQLRDEYRTYKLLGGTEGIPQV--YYFGQEGKYNILVIDL 105 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCC-cchHHHHHHHHHHHcCCCCCCce--eeeccccchhhhhhhh
Confidence 47788999999999999998 67899999997544332 233556666666664 4555554 34432 2245699998
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-----CceEECCcc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-----FEVRLGSLS 664 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-----~~~ki~Dfg 664 (693)
. +-||+|+..-+. +.++-.+.+.||+|+..-++|+|+. .+|+|||||.|.||..- ..++|.|||
T Consensus 106 L-GPSLEDLFD~Cg-------R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG 174 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCG-------RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFG 174 (449)
T ss_pred h-CcCHHHHHHHhc-------CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEecc
Confidence 7 569999887554 3488899999999999999999998 89999999999999843 458999999
Q ss_pred cccccCCC--Ccce----eeeeehhhhhhh
Q 035786 665 ELHAQGDS--HQNV----LTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~--~~~~----~~~~~~~~~y~a 688 (693)
+||.+.|. +.++ .....||-.||+
T Consensus 175 mAK~YrDp~TkqHIPYrE~KSLsGTARYMS 204 (449)
T KOG1165|consen 175 MAKEYRDPKTKQHIPYREHKSLSGTARYMS 204 (449)
T ss_pred chhhhcCccccccCccccccccccceeeeE
Confidence 99999442 2222 333678888885
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.5e-14 Score=145.97 Aligned_cols=137 Identities=15% Similarity=0.149 Sum_probs=106.5
Q ss_pred cCccc-cCCeeeEEEEEeCCCcEEEEEEecccc--------------cCHHHHHHHHHHHhcCCCCCc--cceeEEEEcC
Q 035786 517 TNLIK-KGHSGDLFKGTLAGGTTVVVKKVSLHS--------------FKKESYMMELDLFSRVSHARL--VPLLGQCLEH 579 (693)
Q Consensus 517 ~~~ig-~G~~G~Vy~~~~~~g~~vavK~l~~~~--------------~~~~~f~~Ei~~l~~l~H~ni--v~l~g~~~~~ 579 (693)
..+|| .|+.|+||+.+.. +..++||+..... .....+.+|++++.+++|+++ ++.++++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999885 6789999774311 113457889999999999885 6777765433
Q ss_pred CCe---eEEEEccCCC-CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC
Q 035786 580 ETE---KLLVYKYMVC-GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK 655 (693)
Q Consensus 580 ~~~---~~lv~ey~~~-GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~ 655 (693)
... .++|+||+++ ++|.+++... .++.. ...+++.++.+||.. +|+||||||.|||++.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---------~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~ 178 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---------PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPD 178 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---------CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCC
Confidence 222 2499999997 6999887532 23332 356789999999998 99999999999999998
Q ss_pred CceEECCcccccccC
Q 035786 656 FEVRLGSLSELHAQG 670 (693)
Q Consensus 656 ~~~ki~Dfgla~~~~ 670 (693)
.++++.|||.++...
T Consensus 179 ~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 179 GKFWLIDFDRGELRT 193 (239)
T ss_pred CCEEEEECCCcccCC
Confidence 999999999988853
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.8e-14 Score=147.89 Aligned_cols=164 Identities=21% Similarity=0.296 Sum_probs=131.4
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCC-CccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHA-RLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~-niv~l~g~~~~~~~~~~lv~e 588 (693)
|.....||.|+||.||++... ..+|+|.+..... ..+.|.+|+.+++++.|+ +++++..++.. ....++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD-EGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec-CCEEEEEEe
Confidence 344567999999999999987 7899999865332 256799999999999988 79999998853 345799999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC-ceEECCccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF-EVRLGSLSELH 667 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~-~~ki~Dfgla~ 667 (693)
|+.++++.+++...... ..+.......+..+++.++.|+|.. +++|||+||+||+++... .+++.|||.++
T Consensus 79 ~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~ 150 (384)
T COG0515 79 YVDGGSLEDLLKKIGRK-----GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAK 150 (384)
T ss_pred cCCCCcHHHHHHhcccc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcce
Confidence 99999999777543210 2588888999999999999999998 799999999999999988 79999999998
Q ss_pred ccCCCCcc-----eeeeeehhhhhhh
Q 035786 668 AQGDSHQN-----VLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~-----~~~~~~~~~~y~a 688 (693)
........ ......++.+|+|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~t~~~~~ 176 (384)
T COG0515 151 LLPDPGSTSSIPALPSTSVGTPGYMA 176 (384)
T ss_pred ecCCCCccccccccccccccccccCC
Confidence 76333221 2345667777765
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.8e-14 Score=150.21 Aligned_cols=146 Identities=16% Similarity=0.192 Sum_probs=115.4
Q ss_pred CCCccCccccCCeeeEEEEEeCCC--cEEEEEEecccccC-HHHHHHHHHHHhcCCC----CCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGG--TTVVVKKVSLHSFK-KESYMMELDLFSRVSH----ARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g--~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H----~niv~l~g~~~~~~~~~~l 585 (693)
.|.....||+|+||.||++.-... ..+|+|........ ...+..|+.++..+.+ +++..++......+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 577889999999999999996543 57888876543222 2268889999988873 4677776655323457899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-----CceEE
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-----FEVRL 660 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-----~~~ki 660 (693)
||+.. +-+|.++..... ...++-.+.++||.|+..+|.+||+. ++|||||||.|+.+... ..+.+
T Consensus 99 VM~l~-G~sL~dl~~~~~------~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~l 168 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP------PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYL 168 (322)
T ss_pred EEecc-CccHHHHHHhCC------CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEE
Confidence 99976 679998765432 24689999999999999999999988 99999999999999865 46999
Q ss_pred CCcccccc
Q 035786 661 GSLSELHA 668 (693)
Q Consensus 661 ~Dfgla~~ 668 (693)
.|||+++.
T Consensus 169 lDfGlar~ 176 (322)
T KOG1164|consen 169 LDFGLARR 176 (322)
T ss_pred EecCCCcc
Confidence 99999993
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2e-14 Score=145.83 Aligned_cols=163 Identities=14% Similarity=0.199 Sum_probs=125.6
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCC--CC----ccceeEEEEcCCCee
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSH--AR----LVPLLGQCLEHETEK 583 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H--~n----iv~l~g~~~~~~~~~ 583 (693)
++.|.....+|+|.||.|-++.. ..+..||||.++.-..-++.-+-|++++.++.+ |+ +|.+..|+ +-.+..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF-dyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF-DYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh-hccCce
Confidence 55677788999999999999974 347899999987544445667789999999942 22 56665554 445678
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---------
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD--------- 654 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~--------- 654 (693)
++|+|.| +-|+.++|..... .++.-.+...|+.|+.++++|||+. .++|=||||+|||+-+
T Consensus 167 Civfell-G~S~~dFlk~N~y------~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~ 236 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNY------IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNP 236 (415)
T ss_pred EEEEecc-ChhHHHHhccCCc------cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEecc
Confidence 9999988 4499999976432 4578888999999999999999999 9999999999999842
Q ss_pred -----------CCceEECCcccccccCCCCcc-eeeeeehhh
Q 035786 655 -----------KFEVRLGSLSELHAQGDSHQN-VLTRFLWRQ 684 (693)
Q Consensus 655 -----------~~~~ki~Dfgla~~~~~~~~~-~~~~~~~~~ 684 (693)
+..+||.|||-|......|.+ +.|+-|.+|
T Consensus 237 k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAP 278 (415)
T KOG0671|consen 237 KKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAP 278 (415)
T ss_pred CCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCc
Confidence 234799999999997665543 344444444
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.3e-13 Score=149.15 Aligned_cols=143 Identities=15% Similarity=0.115 Sum_probs=104.1
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC-----------------------------------------HH
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK-----------------------------------------KE 552 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~-----------------------------------------~~ 552 (693)
|+ .+.||.|++|.||+|++.+|+.||||....+-.. +-
T Consensus 120 fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El 198 (437)
T TIGR01982 120 FE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL 198 (437)
T ss_pred CC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence 44 4689999999999999999999999987543100 00
Q ss_pred HHHHHHHHHhcCC----CCCccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHH-
Q 035786 553 SYMMELDLFSRVS----HARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE- 627 (693)
Q Consensus 553 ~f~~Ei~~l~~l~----H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~- 627 (693)
+|.+|.+.+.+++ |.+-|..-..|.+.....+|||||+++++|.++...... .. .+.+++..+++
T Consensus 199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-------~~---~~~~ia~~~~~~ 268 (437)
T TIGR01982 199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-------GL---DRKALAENLARS 268 (437)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-------CC---CHHHHHHHHHHH
Confidence 3566776666653 333333333444334567999999999999987653211 12 24567777766
Q ss_pred HHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 628 GLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 628 gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
.+..+|.. +++|+|+||.||++++++++++.|||+++.+.
T Consensus 269 ~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 269 FLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 46778877 99999999999999999999999999988864
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-13 Score=143.69 Aligned_cols=135 Identities=21% Similarity=0.316 Sum_probs=110.9
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCC-----CC---CccceeEEEEcC---
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-----HA---RLVPLLGQCLEH--- 579 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-----H~---niv~l~g~~~~~--- 579 (693)
+.|...+++|-|.|.+||.+.. .+.+.||+|+++....-.+.-..||++|++++ |+ .||+|+.+|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN 157 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN 157 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence 4466778999999999999974 45778999998765444677788999999984 33 499999988643
Q ss_pred CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC
Q 035786 580 ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK 655 (693)
Q Consensus 580 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~ 655 (693)
+..++||+||. +-+|..+|..... +-+.-....+|+.||..||.|||.+| +|||-||||+|||+..+
T Consensus 158 G~HVCMVfEvL-GdnLLklI~~s~Y------rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 158 GQHVCMVFEVL-GDNLLKLIKYSNY------RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCST 224 (590)
T ss_pred CcEEEEEehhh-hhHHHHHHHHhCC------CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeecc
Confidence 23689999998 5588888876443 34888889999999999999999999 89999999999999755
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.5e-13 Score=143.85 Aligned_cols=162 Identities=15% Similarity=0.244 Sum_probs=127.4
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCC------CCCccceeEEEEcCCCeeEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVS------HARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~------H~niv~l~g~~~~~~~~~~lv 586 (693)
|...-..|+|-|+.|.+|.- .-|..||||++.......+.=..|+++|.++. --+.++|+-.|+. .+..+||
T Consensus 434 Y~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h-knHLClV 512 (752)
T KOG0670|consen 434 YEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH-KNHLCLV 512 (752)
T ss_pred eEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh-cceeEEE
Confidence 44445579999999999985 34789999999766555555677999999995 2357888877764 4789999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEECCccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLGSLSE 665 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~Dfgl 665 (693)
+|-.. -+|++.|..... ..-|.......+|.|+.-||..|-.. +|+|.||||.|||+++. ...||||||-
T Consensus 513 FE~Ls-lNLRevLKKyG~-----nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 513 FEPLS-LNLREVLKKYGR-----NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred ehhhh-chHHHHHHHhCc-----ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCcc
Confidence 99775 489999976432 12366677778999999999999876 99999999999999976 5789999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|..+++.. .|.+.++..|+|
T Consensus 584 A~~~~ene---itPYLVSRFYRa 603 (752)
T KOG0670|consen 584 ASFASENE---ITPYLVSRFYRA 603 (752)
T ss_pred cccccccc---ccHHHHHHhccC
Confidence 99985544 355667777765
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.2e-12 Score=147.88 Aligned_cols=105 Identities=29% Similarity=0.432 Sum_probs=70.6
Q ss_pred ccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEc
Q 035786 264 LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNI 343 (693)
Q Consensus 264 L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~l 343 (693)
++.|+|++|.++|.+|..+ ..+++|+.|+|++|+++|.+|..+..+++|+.|+|++|+++|.+|. .+..+.+|+.|+|
T Consensus 420 v~~L~L~~n~L~g~ip~~i-~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~-~l~~L~~L~~L~L 497 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDI-SKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPE-SLGQLTSLRILNL 497 (623)
T ss_pred EEEEECCCCCccccCCHHH-hCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCch-HHhcCCCCCEEEC
Confidence 5667777777777776653 6677777777777777777777777777777777777777777774 4556667777777
Q ss_pred cCCccceecCCC---CCCCCCEEEccCCcc
Q 035786 344 SNNMLYGDLNSS---SFRKFSLIDLSSNYF 370 (693)
Q Consensus 344 s~N~l~g~~~~~---~~~~l~~ldLs~N~l 370 (693)
++|+++|.+|.. .+.++..+++++|..
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCcc
Confidence 777777777641 123445566666653
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=4e-13 Score=159.57 Aligned_cols=96 Identities=16% Similarity=0.179 Sum_probs=76.0
Q ss_pred cCCC-CCccceeEEEEcC------CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccC
Q 035786 563 RVSH-ARLVPLLGQCLEH------ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHE 635 (693)
Q Consensus 563 ~l~H-~niv~l~g~~~~~------~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~ 635 (693)
.++| +||++++++|... ....+.++||+ .++|+++|+... ..+++.+...|+.||++||+|||+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~ 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD-------RSVDAFECFHVFRQIVEIVNAAHSQ 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc-------ccccHHHHHHHHHHHHHHHHHHHhC
Confidence 4456 6888888877211 12456788988 569999997422 3589999999999999999999988
Q ss_pred CCCCeEecCCCCCCeeeC-------------------CCCceEECCccccccc
Q 035786 636 CNPPLVHRDVQASSILLD-------------------DKFEVRLGSLSELHAQ 669 (693)
Q Consensus 636 ~~p~iiHrDlk~~NILld-------------------~~~~~ki~Dfgla~~~ 669 (693)
+||||||||+||||+ .++.+|++|||+++..
T Consensus 100 ---gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~ 149 (793)
T PLN00181 100 ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRRE 149 (793)
T ss_pred ---CeeeccCCchhEEEcccCcEEEeeccccCcccccccCccccccccccccc
Confidence 999999999999994 4567888888888753
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.8e-14 Score=150.04 Aligned_cols=176 Identities=35% Similarity=0.462 Sum_probs=136.0
Q ss_pred cCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCE
Q 035786 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSN 170 (693)
Q Consensus 91 ~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 170 (693)
.|+--...|++.|.++ .+|..+.. +-.|+.|.|..|.+. .||..+.++..|++|||+.|+++ .+|..+..|+ |+.
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~-f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACA-FVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred cccchhhhhccccccc-cCchHHHH-HHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 3444455677777776 57776654 677888888888876 67888888888888888888887 6677777776 888
Q ss_pred EEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcC
Q 035786 171 LDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250 (693)
Q Consensus 171 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 250 (693)
|-+++|+++ .+|..++.+..|..||.+.|.+. .+|+.++.+.+|+.|.+..|++. .+|+++..| .|..||+|.|++
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNki 223 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKI 223 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCce
Confidence 888888887 67778887788888888888876 67777888888888888888887 466667755 478888888888
Q ss_pred cccCchhhhcCccccccccccccccc
Q 035786 251 SGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 251 ~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+ .+|..|.+|+.|++|-|.+|.++.
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCCC
Confidence 7 678888888888888888888763
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.4e-13 Score=145.91 Aligned_cols=174 Identities=30% Similarity=0.469 Sum_probs=82.2
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+..-...||+.|++. .+|..+..+..|+.|.|..|.+. .+|..+.++..|.+|||+.|+++ .+|..++.|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 333444555555554 44555555555555555555554 44555555555555555555554 3444444432 44455
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|+++ .+|..++.+..|..||.+.|++. .+|..++.+.+|+.|.+..|++. .+|.++..| .|..||+|.|+++
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-
Confidence 5555543 34444444444455555555444 34444444444444444444444 233333322 3444444444444
Q ss_pred cCCCcccCCCCCCCEEEccCCcCC
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLD 300 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~ 300 (693)
.||.. |..|..|++|-|.+|.|.
T Consensus 225 ~iPv~-fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 225 YLPVD-FRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred ecchh-hhhhhhheeeeeccCCCC
Confidence 33332 244444444444444444
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.4e-13 Score=129.88 Aligned_cols=134 Identities=23% Similarity=0.507 Sum_probs=112.4
Q ss_pred ccccCCeeeEEEEEeCCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCCh
Q 035786 519 LIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDL 595 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL 595 (693)
+|.+...|+.|||+|. |..+++|.+..... ..++|..|.-.++-+.||||.+.+|.|.+. ....++..|||.|||
T Consensus 197 kl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-pnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 197 KLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-PNLVIISQYMPFGSL 274 (448)
T ss_pred hhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-CCceEeeeeccchHH
Confidence 5788889999999997 45566777754332 246799999999989999999999999764 567899999999999
Q ss_pred hhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 596 ASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 596 ~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
...||+... ..+|..+..++|.+||+|++|||+- .|-|..--+.++.|.+|+++++||+
T Consensus 275 ynvlhe~t~------vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris 333 (448)
T KOG0195|consen 275 YNVLHEQTS------VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS 333 (448)
T ss_pred HHHHhcCcc------EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee
Confidence 999998654 4578889999999999999999975 5556666799999999999999985
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.29 E-value=4e-12 Score=138.88 Aligned_cols=198 Identities=37% Similarity=0.520 Sum_probs=135.6
Q ss_pred EEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCC-CCCEEEccCCCCCCcCchhhhcCcCCCeeecccc
Q 035786 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELK-KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200 (693)
Q Consensus 122 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 200 (693)
.|+++.|.+...+ ..+..++.++.|++.+|.++ .+|.....++ +|+.|++++|.+. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4666666653222 23444566777777777776 4555555553 7777777777776 45566777777777777777
Q ss_pred cCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCC
Q 035786 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSE 280 (693)
Q Consensus 201 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~ 280 (693)
+++ .+|...+.+++|+.|++++|+++ .+|.....+..|++|.+++|.+. ..+..+.++.++..|.+.+|++... +.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~-~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL-PE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-cc
Confidence 776 45555557777777788887776 46665556666788888888533 3556677778888888888877632 22
Q ss_pred cccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCc
Q 035786 281 GLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPI 329 (693)
Q Consensus 281 ~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~ 329 (693)
....+++++.|++++|+++...+ +....+++.|++++|.++...|.
T Consensus 250 -~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 250 -SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred -hhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 23667778888888888875433 77788888888888888876664
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.28 E-value=4e-12 Score=138.87 Aligned_cols=198 Identities=38% Similarity=0.478 Sum_probs=127.7
Q ss_pred EEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCc-CCCeeecccccCCCcCcccccCCCCCCEEEccCC
Q 035786 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLG-NLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDN 224 (693)
Q Consensus 146 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 224 (693)
.|+++.|.+...+ ..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5666666664332 23445567777777777776 5566666664 7777777777776 45556677777777777777
Q ss_pred cccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCc
Q 035786 225 ALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALP 304 (693)
Q Consensus 225 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p 304 (693)
+++ .+|...+.++.|+.|++++|+++ .+|.....+..|++|++++|.+.. ++.. +.++.++..+.+.+|++.. ++
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~-~~~~-~~~~~~l~~l~l~~n~~~~-~~ 248 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIE-LLSS-LSNLKNLSGLELSNNKLED-LP 248 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCccee-cchh-hhhcccccccccCCceeee-cc
Confidence 776 44554556677777777777776 455555555667777777774321 2222 3556667777777777653 25
Q ss_pred ccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC
Q 035786 305 ATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS 354 (693)
Q Consensus 305 ~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~ 354 (693)
..+..+++++.|++++|+++ .++. ......++.|++++|.+...+|.
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~-~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQIS-SISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred chhccccccceecccccccc-cccc--ccccCccCEEeccCccccccchh
Confidence 56666777777777777776 3332 45566777777777777665554
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-11 Score=117.75 Aligned_cols=132 Identities=16% Similarity=0.076 Sum_probs=98.1
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCChhh
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLAS 597 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~ 597 (693)
+.++.|.++.||+++.. |..|++|...........+.+|++++..+.+.++++-.-++. . ...++||||+++.++.+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~-~-~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD-P-ETGVLITEFIEGSELLT 80 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe-C-CCCeEEEEecCCCcccc
Confidence 46889999999999975 778999987554323345778999999987766654432332 2 34589999999988754
Q ss_pred hhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC--CCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 598 SLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC--NPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 598 ~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~--~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
.- . ....++.+++++++.||... .+.++|+|+++.||+++ +..+++.|||.+..-
T Consensus 81 ~~-------------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~ 137 (170)
T cd05151 81 ED-------------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMN 137 (170)
T ss_pred cc-------------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCC
Confidence 20 0 01235678899999999873 23479999999999999 668999999998763
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.4e-12 Score=146.40 Aligned_cols=144 Identities=17% Similarity=0.227 Sum_probs=108.7
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCC---CCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVS---HARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+.|.....||+|+||+||+|+-.+|+.||+|.-+..... +|.-=.+++.+++ -+-|+.+..++.- .+..+||+|
T Consensus 698 ~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W--EfYI~~q~~~RLk~~~~~~~~~~~~a~~~-~~~S~lv~e 774 (974)
T KOG1166|consen 698 EKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW--EFYICLQVMERLKPQMLPSIMHISSAHVF-QNASVLVSE 774 (974)
T ss_pred eeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce--eeeehHHHHHhhchhhhcchHHHHHHHcc-CCcceeeee
Confidence 456777889999999999999888999999986543322 1222234455555 1223333322222 356789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-------CCCceEEC
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-------DKFEVRLG 661 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-------~~~~~ki~ 661 (693)
|.+.|+|.+++.. .+.++|.-.+.++.++++-++.||.. .|||+||||.|.+|. +..-++|.
T Consensus 775 y~~~Gtlld~~N~--------~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 775 YSPYGTLLDLINT--------NKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred ccccccHHHhhcc--------CCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEE
Confidence 9999999999962 24589999999999999999999998 999999999999995 23458999
Q ss_pred Cccccccc
Q 035786 662 SLSELHAQ 669 (693)
Q Consensus 662 Dfgla~~~ 669 (693)
|||-+-.+
T Consensus 844 DfG~siDm 851 (974)
T KOG1166|consen 844 DFGRSIDM 851 (974)
T ss_pred ecccceee
Confidence 99986554
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.8e-11 Score=133.23 Aligned_cols=144 Identities=14% Similarity=0.123 Sum_probs=94.5
Q ss_pred CCCccCccccCCeeeEEEEEeCC-CcEEEEEEeccccc---------------------------C--------H-----
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSF---------------------------K--------K----- 551 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~---------------------------~--------~----- 551 (693)
.|+. +.||.|++|.||+|++.+ |+.||||.+..+-. . .
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4666 789999999999999987 99999999864310 0 0
Q ss_pred -HHHHHHHHHHhcCC----CCCccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHH
Q 035786 552 -ESYMMELDLFSRVS----HARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAA 626 (693)
Q Consensus 552 -~~f~~Ei~~l~~l~----H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia 626 (693)
-+|.+|..-+.+++ +.+.|.+=..+++-....+|||||++++.+.++-.-.. ...+ +..++...+
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~-------~g~d---~~~la~~~v 269 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRA-------AGTD---MKLLAERGV 269 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHh-------cCCC---HHHHHHHHH
Confidence 13555665555553 44444433344433356789999999999987422111 0122 112222222
Q ss_pred HH-HhhhccCCCCCeEecCCCCCCeeeCCCC----ceEECCcccccccC
Q 035786 627 EG-LSYLHHECNPPLVHRDVQASSILLDDKF----EVRLGSLSELHAQG 670 (693)
Q Consensus 627 ~g-l~yLH~~~~p~iiHrDlk~~NILld~~~----~~ki~Dfgla~~~~ 670 (693)
+. +.-++.. +++|+|+||.||+++.++ ++++.|||++..+.
T Consensus 270 ~~~~~Qif~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 270 EVFFTQVFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHHHHHHHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 21 1222333 899999999999999988 99999999988763
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.6e-12 Score=137.86 Aligned_cols=153 Identities=18% Similarity=0.190 Sum_probs=120.5
Q ss_pred ccccCCeeeEEEEE----eCCCcEEEEEEecccccC---HHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEEccC
Q 035786 519 LIKKGHSGDLFKGT----LAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~----~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
++|+|.||.|+... .+.|+.+|.|.+.+.... +.....|..++..++ ||.+|++. |+++.+...+++.||.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lh-yafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLH-YAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeee-eeeccccchhHhhhhc
Confidence 37999999998754 234778899988654322 225667888899997 99999985 6777778899999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
.+|+|...+.... ..+...-..+....|-+++++|.. .|+|||+|++||++|.++.+|+.|||+.|..-
T Consensus 80 rgg~lft~l~~~~--------~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v 148 (612)
T KOG0603|consen 80 RGGDLFTRLSKEV--------MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAV 148 (612)
T ss_pred ccchhhhccccCC--------chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhH
Confidence 9999988775422 244444445566678899999998 99999999999999999999999999999874
Q ss_pred CCCcceeeeeehhhhhhh
Q 035786 671 DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~~~~~~~~~~y~a 688 (693)
+.... |||-+|||
T Consensus 149 ~~~~~-----cgt~eymA 161 (612)
T KOG0603|consen 149 KEKIA-----CGTYEYRA 161 (612)
T ss_pred hhhhc-----ccchhhhh
Confidence 44442 88999988
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.13 E-value=4e-10 Score=112.50 Aligned_cols=143 Identities=19% Similarity=0.206 Sum_probs=109.8
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCC--CccceeEEEEcCC--CeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHA--RLVPLLGQCLEHE--TEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~--niv~l~g~~~~~~--~~~~lv~ey~~ 591 (693)
+.|+.|.++.||+++..+|+.++||....... ....+.+|++++..+++. ++.+++.++.+.+ +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46899999999999987778999998765433 245688999999999764 4566776654321 24589999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-----------------------------------
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC----------------------------------- 636 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~----------------------------------- 636 (693)
++++.+.+.. ..++..++..++.++++.|++||+-.
T Consensus 84 G~~l~~~~~~---------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (223)
T cd05154 84 GRVLRDRLLR---------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEP 154 (223)
T ss_pred CEecCCCCCC---------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccccc
Confidence 9988765431 13677788888888888888888521
Q ss_pred ------------------CCCeEecCCCCCCeeeCC--CCceEECCccccccc
Q 035786 637 ------------------NPPLVHRDVQASSILLDD--KFEVRLGSLSELHAQ 669 (693)
Q Consensus 637 ------------------~p~iiHrDlk~~NILld~--~~~~ki~Dfgla~~~ 669 (693)
.+.++|+|+.+.||+++. +..+.|.||+.+..-
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 155 PAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred HHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 245799999999999998 567889999987763
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.6e-11 Score=136.08 Aligned_cols=161 Identities=16% Similarity=0.144 Sum_probs=119.4
Q ss_pred CccCccccCCeeeEEEEEe-CCCcEEEEEEecc---cccCH----HHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 515 SETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSL---HSFKK----ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~---~~~~~----~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
...+++|.|.||.|+..+. .+.+..+.|.... ..... ..+..|..+-.+++|+|++..+..+.+. ...+-+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-DGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc-ccchhh
Confidence 3567899999998887764 3444455553321 11111 1255688888899999998777666543 233445
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++ ||..++.+. ..+.-..+..+..|+..|+.|+|.. +|.|||+|+.|+++..++.+||.|||.+
T Consensus 400 mE~~~~-Dlf~~~~~~--------~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~ 467 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSN--------GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAA 467 (601)
T ss_pred hhcccH-HHHHHHhcc--------cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcc
Confidence 999999 999998653 2477778888999999999999998 9999999999999999999999999998
Q ss_pred ccc---CCCCcceeeeeehhhhhhh
Q 035786 667 HAQ---GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~---~~~~~~~~~~~~~~~~y~a 688 (693)
... .+........++|+..|+|
T Consensus 468 ~vf~~~~e~~~~~~~g~~gS~pY~a 492 (601)
T KOG0590|consen 468 SVFRYPWEKNIHESSGIVGSDPYLA 492 (601)
T ss_pred eeeccCcchhhhhhcCcccCCcCcC
Confidence 875 2222244556788888876
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.6e-11 Score=122.41 Aligned_cols=184 Identities=27% Similarity=0.263 Sum_probs=72.7
Q ss_pred CCccCCEEecccCcCCccCc--cccCCCCCCCEEEccCCCCCCcC--chhhhcCcCCCeeecccccCCCcCcccc-cCCC
Q 035786 140 NLSRLNVLYLSGNSLAGNVP--ATLGELKKLSNLDLSRNLLTGEI--PNAISLLGNLTRLNLASNFFTGQIPSGL-YSLS 214 (693)
Q Consensus 140 ~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~ 214 (693)
++.+|+...|.+.... ..+ .....|++++.|||+.|-+..-. -.....+++|+.|+|+.|++.-...+.. ..++
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 3444444444444432 111 12344555555555555544221 1223445555555555555532211111 1234
Q ss_pred CCCEEEccCCccccc-CCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEE
Q 035786 215 SIQFLNLSDNALTGF-IPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVD 293 (693)
Q Consensus 215 ~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~ 293 (693)
.|+.|.|+.|.++-. +-.....+++|+.|+|+.|...+.-......+..|+.|+|++|++-..-.-.....++.|..|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 444444444444310 0011122344444444444322222222333344444444444443211111123344444444
Q ss_pred ccCCcCCCc-Cccc-----ccCCCCCCEEEccCCcCc
Q 035786 294 LSGNKLDGA-LPAT-----LFLRPNLRFLDLSRNNIT 324 (693)
Q Consensus 294 Ls~N~l~g~-~p~~-----l~~~~~L~~L~Ls~N~l~ 324 (693)
++.+.++.. .|+. ....++|++|+++.|++.
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 444444321 1111 123455555555555554
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.2e-09 Score=101.28 Aligned_cols=134 Identities=14% Similarity=0.120 Sum_probs=94.5
Q ss_pred ccccCCeeeEEEEEeCC-------CcEEEEEEeccccc----------------------C-HHHHH----HHHHHHhcC
Q 035786 519 LIKKGHSGDLFKGTLAG-------GTTVVVKKVSLHSF----------------------K-KESYM----MELDLFSRV 564 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~-------g~~vavK~l~~~~~----------------------~-~~~f~----~Ei~~l~~l 564 (693)
.||.|.-+.||.|.-.+ +..+|||....... . ++.+. +|.+.|.++
T Consensus 4 ~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~rl 83 (197)
T cd05146 4 CISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKRM 83 (197)
T ss_pred ccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 68999999999998553 47999997642110 0 11222 799999998
Q ss_pred CCC--CccceeEEEEcCCCeeEEEEccCCCCChhh-hhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhh-ccCCCCCe
Q 035786 565 SHA--RLVPLLGQCLEHETEKLLVYKYMVCGDLAS-SLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL-HHECNPPL 640 (693)
Q Consensus 565 ~H~--niv~l~g~~~~~~~~~~lv~ey~~~GsL~~-~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yL-H~~~~p~i 640 (693)
+-. ++.+.+++ ...++||||+.++.+.. .+.. ..++..+...+..+++.+|.++ |.. +|
T Consensus 84 ~~~Gv~vP~pi~~-----~~~~lvME~Ig~~~~~~~~Lkd---------~~~~~~~~~~i~~~i~~~l~~l~H~~---gl 146 (197)
T cd05146 84 QKAGIPCPEVVVL-----KKHVLVMSFIGDDQVPAPKLKD---------AKLNDEEMKNAYYQVLSMMKQLYKEC---NL 146 (197)
T ss_pred HHcCCCCCeEEEe-----cCCEEEEEEcCCCCccchhhhc---------cccCHHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 643 55555542 24689999998754422 1211 1234445567788999999999 655 89
Q ss_pred EecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 641 VHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 641 iHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
||+|+++.||+++ ++.+.|.|||-+-...
T Consensus 147 VHGDLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 147 VHADLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred ecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 9999999999997 4679999999876653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.5e-10 Score=119.90 Aligned_cols=208 Identities=24% Similarity=0.239 Sum_probs=129.1
Q ss_pred CCCCccEEEecCCCCCcCCC--cccCCCccCCEEecccCcCCccC--ccccCCCCCCCEEEccCCCCCCcCchh-hhcCc
Q 035786 116 RLPALQVLDLRSCSLSGSIP--GSFGNLSRLNVLYLSGNSLAGNV--PATLGELKKLSNLDLSRNLLTGEIPNA-ISLLG 190 (693)
Q Consensus 116 ~l~~L~~L~Ls~n~l~g~~p--~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~ 190 (693)
++.+|+...|.++...- .+ .-...|++++.|||+.|-|..-. -.....|++|+.|+|+.|++.-...+. -..++
T Consensus 119 n~kkL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 46677777777776542 12 23456777777777777765322 223456777888888877775332221 12456
Q ss_pred CCCeeecccccCCCc-CcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccC-chhhhcCccccccc
Q 035786 191 NLTRLNLASNFFTGQ-IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSL-PLELRGLRNLAKLV 268 (693)
Q Consensus 191 ~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~ 268 (693)
.|+.|.|++|.++.. +-.....+++|+.|+|..|..-+.--.....+..|++|||++|++-... -...+.++.|..|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 777788887777632 1122345677888888887532222333445667888888888775322 13456777888888
Q ss_pred ccccccccc-CCCc----ccCCCCCCCEEEccCCcCCCc-CcccccCCCCCCEEEccCCcCc
Q 035786 269 ISENGLEGQ-LSEG----LFPTLDQLQVVDLSGNKLDGA-LPATLFLRPNLRFLDLSRNNIT 324 (693)
Q Consensus 269 Ls~N~l~g~-i~~~----~~~~l~~L~~L~Ls~N~l~g~-~p~~l~~~~~L~~L~Ls~N~l~ 324 (693)
++.+.+... +|+. ....+++|++|+++.|++... --..+..+++|+.|....|.|+
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 888777532 1211 123567899999999998421 1134556778888888888886
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.5e-10 Score=127.04 Aligned_cols=217 Identities=32% Similarity=0.325 Sum_probs=138.4
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+..++.+++..|.+.. +-..+..+++|+.|++.+|.+.+. ...+..+++|++|+|++|.|+... .+..+..|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 5667777777777763 334467778888888888888743 323667788888888888887543 355666788888
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCC-ccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIP-SEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
+++|.++.. ..+..+.+|+.+++++|.++..-+ . ...+.+|+.+++.+|.+.. ...+..+..+..+++..|.++
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccce
Confidence 888887632 345557788888888888875433 1 4667778888888887763 233445556666677777776
Q ss_pred ccCCCcccCCCCC--CCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccc
Q 035786 276 GQLSEGLFPTLDQ--LQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLY 349 (693)
Q Consensus 276 g~i~~~~~~~l~~--L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~ 349 (693)
-.-+. ..+.. |+.+++++|++.- ++..+..+..+..|++++|++...-. ......+..+.+..|.+.
T Consensus 222 ~~~~l---~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~~~---~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 222 KLEGL---NELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNLEG---LERLPKLSELWLNDNKLA 290 (414)
T ss_pred eccCc---ccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccccc---ccccchHHHhccCcchhc
Confidence 32211 12222 7777888887763 22455566777778888877763211 223333444555555544
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.1e-09 Score=109.57 Aligned_cols=153 Identities=24% Similarity=0.258 Sum_probs=99.9
Q ss_pred CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCCC-----------CCccceeEEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVSH-----------ARLVPLLGQCL 577 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H-----------~niv~l~g~~~ 577 (693)
+.....||.|+++.||.++.. .|+.+|||........ .+++.+|.-....+.+ +-++++--.-.
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 345678999999999999975 5899999987533322 4567777766666444 33333322222
Q ss_pred cCC---------C------eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEe
Q 035786 578 EHE---------T------EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVH 642 (693)
Q Consensus 578 ~~~---------~------~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiH 642 (693)
..+ . ..+++|+-+ .+||.+++..-...... ...+....|+.+..|+.+.+++||+. +++|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~-~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT-HSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT-SHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc-cchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 110 0 235677766 46898886521100000 23466788899999999999999999 9999
Q ss_pred cCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 643 RDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 643 rDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+||||+|+++++++.++++||+.+...++
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~ 197 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT 197 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTE
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCc
Confidence 99999999999999999999998777644
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1e-09 Score=118.96 Aligned_cols=99 Identities=22% Similarity=0.456 Sum_probs=89.0
Q ss_pred HhcCCCCCccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCe
Q 035786 561 FSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPL 640 (693)
Q Consensus 561 l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~i 640 (693)
|+.+.|.|+.+++|.|.+. ...+.|.+|++.|+|.|.+.... ..+||.-+..+..+|+.||+|||+. +|
T Consensus 1 l~~l~h~n~~~f~g~~~~~-~~~~~i~~~c~rGsl~D~i~~~~-------~~~d~~F~~s~~rdi~~Gl~ylh~s---~i 69 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-PEMIVIWEYCSRGSLLDILSNED-------IKLDYFFILSFIRDISKGLAYLHNS---PI 69 (484)
T ss_pred CcccchhhhhhheeeEecC-CceEEEEeeecCccHHhHHhccc-------cCccHHHHHHHHHHHHHHHHHHhcC---cc
Confidence 4578999999999999975 68899999999999999997522 5699999999999999999999976 55
Q ss_pred -EecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 641 -VHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 641 -iHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
.|+.++++|+++|..+.+|++|||+..+..
T Consensus 70 ~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~ 100 (484)
T KOG1023|consen 70 GYHGALKSSNCLVDSRWVLKLTDFGLNSLLE 100 (484)
T ss_pred eeeeeeccccceeeeeEEEEechhhhccccc
Confidence 999999999999999999999999988763
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.7e-10 Score=105.34 Aligned_cols=123 Identities=32% Similarity=0.429 Sum_probs=35.2
Q ss_pred CCCeeecccccCCCcCccccc-CCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhh-hcCccccccc
Q 035786 191 NLTRLNLASNFFTGQIPSGLY-SLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLEL-RGLRNLAKLV 268 (693)
Q Consensus 191 ~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~ 268 (693)
+++.|+|.+|.++. + +.++ .+.+|+.|+|++|.++.. + .+..++.|++|++++|+++.. +..+ ..+++|++|+
T Consensus 20 ~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRISSI-SEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--EEE
T ss_pred cccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCCcc-ccchHHhCCcCCEEE
Confidence 44555555555542 2 2233 345556666666665532 2 355566666666666666633 2223 3466666666
Q ss_pred cccccccccCCCcccCCCCCCCEEEccCCcCCCcC---cccccCCCCCCEEEc
Q 035786 269 ISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGAL---PATLFLRPNLRFLDL 318 (693)
Q Consensus 269 Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~---p~~l~~~~~L~~L~L 318 (693)
|++|++...-.-..+..+++|+.|+|.+|.++... ...+..+|+|+.||-
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 66666653211122345566666666666665321 112345566666653
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.91 E-value=1e-09 Score=104.01 Aligned_cols=82 Identities=35% Similarity=0.475 Sum_probs=18.5
Q ss_pred CCCccEEEecCCCCCcCCCcccC-CCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhh-hcCcCCCe
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFG-NLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAI-SLLGNLTR 194 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~ 194 (693)
...+++|+|++|.|+. | +.++ .+.+|+.|+|++|.++.. + .+..+++|++|++++|+++. ++..+ ..+++|+.
T Consensus 18 ~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 18 PVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQE 92 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--E
T ss_pred cccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCCc-cccchHHhCCcCCE
Confidence 3456666666666653 2 2343 355666666666666532 2 34555666666666666653 33233 24556666
Q ss_pred eecccccCC
Q 035786 195 LNLASNFFT 203 (693)
Q Consensus 195 L~Ls~N~l~ 203 (693)
|++++|++.
T Consensus 93 L~L~~N~I~ 101 (175)
T PF14580_consen 93 LYLSNNKIS 101 (175)
T ss_dssp EE-TTS---
T ss_pred EECcCCcCC
Confidence 666666554
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.3e-08 Score=95.18 Aligned_cols=131 Identities=19% Similarity=0.244 Sum_probs=98.2
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEE-ecccccC--------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKK-VSLHSFK--------KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~-l~~~~~~--------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
..|++|+-..+|.+.+-+ ..+.+|. +.+.... .+...+|..++.+++---|-...-|..+. ....++||
T Consensus 2 ~~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~-~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP-DNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC-CCCEEEEE
Confidence 358899999999998754 3466663 3332211 34678899999998765554444455553 56789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++-.|++.+... +..++..|-.-+.-||.. +|||+|+.++||++..+. +.+.||||+++
T Consensus 80 ~I~G~~lkd~l~~~---------------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA---------------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc---------------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999998888542 345666777777889998 999999999999998665 88899999987
Q ss_pred c
Q 035786 669 Q 669 (693)
Q Consensus 669 ~ 669 (693)
-
T Consensus 141 s 141 (204)
T COG3642 141 S 141 (204)
T ss_pred c
Confidence 4
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.8e-10 Score=111.28 Aligned_cols=132 Identities=30% Similarity=0.345 Sum_probs=89.8
Q ss_pred CcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccc
Q 035786 189 LGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLV 268 (693)
Q Consensus 189 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 268 (693)
...|+.|||++|.++ .+.+++.-++.++.|++|+|.++. + ..+..+.+|+.||||+|.++ .+-.+-.++-|++.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 345666777777665 455566666777777777777763 2 23666777777777777776 3445556677777888
Q ss_pred cccccccccCCCcccCCCCCCCEEEccCCcCCCcC-cccccCCCCCCEEEccCCcCcccC
Q 035786 269 ISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGAL-PATLFLRPNLRFLDLSRNNITGSW 327 (693)
Q Consensus 269 Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~-p~~l~~~~~L~~L~Ls~N~l~g~~ 327 (693)
|+.|.+.. +. + +..+-+|..||+++|++...- -..++++|.|+.+.|.+|.+.+..
T Consensus 359 La~N~iE~-LS-G-L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 359 LAQNKIET-LS-G-LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhhhHhh-hh-h-hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 88887652 11 1 255667888888888886421 245788999999999999998643
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.1e-10 Score=115.81 Aligned_cols=158 Identities=23% Similarity=0.246 Sum_probs=71.1
Q ss_pred CCCccEEEecCCCCCcC----CCcccCCCccCCEEecccCcCCc----cCcc-------ccCCCCCCCEEEccCCCCCCc
Q 035786 117 LPALQVLDLRSCSLSGS----IPGSFGNLSRLNVLYLSGNSLAG----NVPA-------TLGELKKLSNLDLSRNLLTGE 181 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~----~~p~-------~~~~l~~L~~L~Ls~N~l~~~ 181 (693)
+..+++|+|++|.|... +.+.+.+.++|+..++++ .++| .+|+ .+...++|++||||.|-|.-.
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~ 107 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPK 107 (382)
T ss_pred cCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCcc
Confidence 44455555555554321 223344444555555543 2222 2222 233455666666666666533
Q ss_pred Cch----hhhcCcCCCeeecccccCCCc----C---------cccccCCCCCCEEEccCCccccc----CCccccCCCCC
Q 035786 182 IPN----AISLLGNLTRLNLASNFFTGQ----I---------PSGLYSLSSIQFLNLSDNALTGF----IPSEVGNLDKL 240 (693)
Q Consensus 182 ~p~----~~~~l~~L~~L~Ls~N~l~g~----~---------p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L 240 (693)
-+. -+..+.+|++|.|.+|.+.-. + -.-...-+.|+++..+.|++... +...|...+.|
T Consensus 108 g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~l 187 (382)
T KOG1909|consen 108 GIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTL 187 (382)
T ss_pred chHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhcccc
Confidence 332 234456666666666655310 0 01112234455555555554321 11123333455
Q ss_pred CEEEccCCcCccc----CchhhhcCcccccccccccccc
Q 035786 241 IELDLSKNSISGS----LPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 241 ~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
+.+.++.|.+.-. +-..+..+++|++|||.+|-|+
T Consensus 188 eevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft 226 (382)
T KOG1909|consen 188 EEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFT 226 (382)
T ss_pred ceEEEecccccCchhHHHHHHHHhCCcceeeecccchhh
Confidence 5555555554311 1223444555555555555443
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.3e-10 Score=110.90 Aligned_cols=114 Identities=31% Similarity=0.276 Sum_probs=76.3
Q ss_pred CcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCccc
Q 035786 204 GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLF 283 (693)
Q Consensus 204 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~ 283 (693)
|..-..+..++.|+.||||+|.++ .+.++..-++.++.|++|+|.+... ..+..+++|+.||||+|.++. +. ++-
T Consensus 274 G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~-Gwh 348 (490)
T KOG1259|consen 274 GSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CV-GWH 348 (490)
T ss_pred CceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hh-hhH
Confidence 444444555667888888888877 4566677777888888888887632 236777788888888887763 22 222
Q ss_pred CCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCc
Q 035786 284 PTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324 (693)
Q Consensus 284 ~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~ 324 (693)
..+.+++.|.|+.|.+.. -+.+..+-+|..||+++|+|.
T Consensus 349 ~KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 349 LKLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred hhhcCEeeeehhhhhHhh--hhhhHhhhhheeccccccchh
Confidence 456677777777777753 234555667777777777775
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.9e-10 Score=124.81 Aligned_cols=239 Identities=29% Similarity=0.258 Sum_probs=157.3
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
+.++.++...+.+.+.--. ...+..++.+++..|.+.. +-..+..+++|+.|++.+|.|.. +...+..+.+|++|++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~l 125 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDL 125 (414)
T ss_pred chhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheec
Confidence 3445555555543321111 1456778888899998874 33457888999999999999984 3444778999999999
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCc-hhhhcCccccccccccccccc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP-LELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g 276 (693)
++|.++... .+..++.|+.|++++|.++.. ..+..++.|+.+++++|++...-+ . ...+.+++.+++.+|.+.-
T Consensus 126 s~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~ 200 (414)
T KOG0531|consen 126 SFNKITKLE--GLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE 200 (414)
T ss_pred ccccccccc--chhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc
Confidence 999998553 466777899999999999843 456678999999999999986554 2 5778899999999998863
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCC--CCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRP--NLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS 354 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~--~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~ 354 (693)
.-. +..+..+..+++..|.++-.-+. ..+. .|+.+++++|++.- ++ ........+..+++++|++...-..
T Consensus 201 i~~---~~~~~~l~~~~l~~n~i~~~~~l--~~~~~~~L~~l~l~~n~i~~-~~-~~~~~~~~l~~l~~~~n~~~~~~~~ 273 (414)
T KOG0531|consen 201 IEG---LDLLKKLVLLSLLDNKISKLEGL--NELVMLHLRELYLSGNRISR-SP-EGLENLKNLPVLDLSSNRISNLEGL 273 (414)
T ss_pred ccc---hHHHHHHHHhhcccccceeccCc--ccchhHHHHHHhcccCcccc-cc-ccccccccccccchhhccccccccc
Confidence 211 23344555568888888643322 1222 37888888888862 21 1223444556666666666543222
Q ss_pred CCCCCCCEEEccCCcce
Q 035786 355 SSFRKFSLIDLSSNYFQ 371 (693)
Q Consensus 355 ~~~~~l~~ldLs~N~l~ 371 (693)
.....+..+.++.|.+.
T Consensus 274 ~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 274 ERLPKLSELWLNDNKLA 290 (414)
T ss_pred cccchHHHhccCcchhc
Confidence 33333444444444443
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.77 E-value=5.3e-09 Score=81.52 Aligned_cols=61 Identities=43% Similarity=0.577 Sum_probs=46.1
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCC
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLL 178 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 178 (693)
|+|++|++++|+++...+..|.++++|++|++++|.+....|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4677788888877766666777778888888888877766667777777788887777764
|
... |
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=6.4e-08 Score=90.08 Aligned_cols=143 Identities=15% Similarity=0.172 Sum_probs=102.2
Q ss_pred ccCccccCCeeeEEEEEeCCCcEEEEEE-eccccc--------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 516 ETNLIKKGHSGDLFKGTLAGGTTVVVKK-VSLHSF--------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~~g~~vavK~-l~~~~~--------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
...+|-||+-+.||++.+. |+...||. ..+... .++...+|++++.+++---|....-++.+. ..-.|+
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~-~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDT-YGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEec-CCCeEE
Confidence 4567899999999999986 67777774 332221 145678899999999765554444455543 455799
Q ss_pred EccCCC-CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC---ceEECC
Q 035786 587 YKYMVC-GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF---EVRLGS 662 (693)
Q Consensus 587 ~ey~~~-GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~---~~ki~D 662 (693)
|||+++ -++++++....... -+-......+..|-+.+.-||.+ .|||+||..+||+|..++ .+.+.|
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~------~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lId 159 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDE------SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILID 159 (229)
T ss_pred EEeccchhHHHHHHHHHccCc------ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEe
Confidence 999975 48889887543211 11112256777888888999999 999999999999997554 458999
Q ss_pred ccccccc
Q 035786 663 LSELHAQ 669 (693)
Q Consensus 663 fgla~~~ 669 (693)
||+...-
T Consensus 160 fgls~~s 166 (229)
T KOG3087|consen 160 FGLSSVS 166 (229)
T ss_pred ecchhcc
Confidence 9997663
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.4e-09 Score=110.02 Aligned_cols=238 Identities=24% Similarity=0.319 Sum_probs=119.1
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCC----cCchHhh------hCCCCccEEEecCCCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPG----SIPEWFG------YRLPALQVLDLRSCSLS 131 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g----~ip~~~~------~~l~~L~~L~Ls~n~l~ 131 (693)
..++.|+|++... |.=-....-..+.+.+.|+..++|+- |+| .+|+.+- -..|+|++||||.|.|.
T Consensus 30 ~s~~~l~lsgnt~---G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 30 DSLTKLDLSGNTF---GTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred CceEEEeccCCch---hHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 3578888887532 21111111124556667777777653 444 3444321 12567778888887776
Q ss_pred cCCCcc----cCCCccCCEEecccCcCCcc-------------CccccCCCCCCCEEEccCCCCCCc----CchhhhcCc
Q 035786 132 GSIPGS----FGNLSRLNVLYLSGNSLAGN-------------VPATLGELKKLSNLDLSRNLLTGE----IPNAISLLG 190 (693)
Q Consensus 132 g~~p~~----~~~l~~L~~L~Ls~N~l~~~-------------~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~ 190 (693)
..-+.. +.+++.|+.|+|.+|.+.-. .......-++|++++.++|++... +...+...+
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~ 185 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHP 185 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhcc
Confidence 443333 34566777777777766411 011123334566666666665422 122344445
Q ss_pred CCCeeecccccCCCc----CcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccc
Q 035786 191 NLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAK 266 (693)
Q Consensus 191 ~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 266 (693)
.|+.+.++.|.+.-. +-..+..+++|+.|||.+|-|+..-.. .+...+..+++|+.
T Consensus 186 ~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~--------------------~LakaL~s~~~L~E 245 (382)
T KOG1909|consen 186 TLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSV--------------------ALAKALSSWPHLRE 245 (382)
T ss_pred ccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHH--------------------HHHHHhcccchhee
Confidence 555555555554310 112234445555555555544321000 11223334444555
Q ss_pred ccccccccccc----CCCcccCCCCCCCEEEccCCcCCCc----CcccccCCCCCCEEEccCCcC
Q 035786 267 LVISENGLEGQ----LSEGLFPTLDQLQVVDLSGNKLDGA----LPATLFLRPNLRFLDLSRNNI 323 (693)
Q Consensus 267 L~Ls~N~l~g~----i~~~~~~~l~~L~~L~Ls~N~l~g~----~p~~l~~~~~L~~L~Ls~N~l 323 (693)
|+++++.+... +-..+-...++|++|.+.+|.++-. +-..+...+.|..|+|++|++
T Consensus 246 l~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 246 LNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 55555444311 0011112345677778888877632 222334567888888888888
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.2e-08 Score=117.78 Aligned_cols=178 Identities=28% Similarity=0.330 Sum_probs=104.2
Q ss_pred CCCEEEccCCCC-CCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 94 LLSSFNASGLSL-PGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 94 ~L~~L~ls~~~l-~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
.|++|-+..|.- ...++..+...+|.|++|||++|.--+.+|..+++|-+|++|+|++..+. .+|..+++|.+|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 566666666652 44555554455888888888877766677888888888888888887776 6777888888888888
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccC--CCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCC----EEEcc
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFF--TGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLI----ELDLS 246 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l--~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~----~L~Ls 246 (693)
+..+.-...+|.....+.+|++|.+..-.. ++..-..+.++.+|+.|....... .+-..+..++.|. .+.+.
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~ 702 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIE 702 (889)
T ss_pred cccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhc
Confidence 887766556666666678888877765432 111222234444455444433222 0111112222222 12222
Q ss_pred CCcCcccCchhhhcCcccccccccccccc
Q 035786 247 KNSISGSLPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 247 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
.+... ..+..+..+.+|+.|.+.+..+.
T Consensus 703 ~~~~~-~~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 703 GCSKR-TLISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred ccccc-eeecccccccCcceEEEEcCCCc
Confidence 22211 23445666677777777666654
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.1e-07 Score=95.20 Aligned_cols=141 Identities=11% Similarity=0.051 Sum_probs=100.6
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEEecccccC------------HHHHHHHHHHHhcCCCCC--ccceeEEEEcC----
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK------------KESYMMELDLFSRVSHAR--LVPLLGQCLEH---- 579 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~------------~~~f~~Ei~~l~~l~H~n--iv~l~g~~~~~---- 579 (693)
+++-+-....|++.++ +|+.|.||+....... ...+.+|.+.+.+++... ..++++|....
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3444444456778777 5788999976432210 124789999998885444 34555554321
Q ss_pred CCeeEEEEccCCCC-ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC----
Q 035786 580 ETEKLLVYKYMVCG-DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---- 654 (693)
Q Consensus 580 ~~~~~lv~ey~~~G-sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---- 654 (693)
....+||+||+++- +|.+++..... ...+...+..+..+++..++-||.. +|+|+|++++|||++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~------~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~ 177 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT------NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPG 177 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc------cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccC
Confidence 12478999999975 89988753211 1245566778999999999999999 9999999999999985
Q ss_pred ---CCceEECCcccccc
Q 035786 655 ---KFEVRLGSLSELHA 668 (693)
Q Consensus 655 ---~~~~ki~Dfgla~~ 668 (693)
+.++.+.||+.++.
T Consensus 178 ~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 178 REEDLKLSVIDLHRAQI 194 (268)
T ss_pred CCCCceEEEEECCcccc
Confidence 57899999998765
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.1e-08 Score=102.77 Aligned_cols=91 Identities=21% Similarity=0.260 Sum_probs=69.7
Q ss_pred CCCCCccceeEEEEcC--------------------------CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHH
Q 035786 564 VSHARLVPLLGQCLEH--------------------------ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWIT 617 (693)
Q Consensus 564 l~H~niv~l~g~~~~~--------------------------~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~ 617 (693)
-+|||||++.++|.+. ....|+||.-.+. +|++++... ..+...
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~---------~~s~r~ 342 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR---------HRSYRT 342 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC---------CCchHH
Confidence 3699999999987643 1235788876654 888888642 255556
Q ss_pred HHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC--CCC--ceEECCccccc
Q 035786 618 RLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD--DKF--EVRLGSLSELH 667 (693)
Q Consensus 618 r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld--~~~--~~ki~Dfgla~ 667 (693)
+.-|..|+.+|+.|||.+ +|.|||+|+.|||+. +|. ...|+|||.+-
T Consensus 343 ~~~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 343 GRVILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred HHHHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 666888999999999999 999999999999994 443 46789999753
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.7e-08 Score=118.55 Aligned_cols=107 Identities=36% Similarity=0.432 Sum_probs=69.6
Q ss_pred CCCccEEEecCCC--CCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCe
Q 035786 117 LPALQVLDLRSCS--LSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTR 194 (693)
Q Consensus 117 l~~L~~L~Ls~n~--l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 194 (693)
.+.|+.|-+..|. +....+..|..++.|++|||++|.--+.+|..+++|-+|++|+|++..+. .+|..+.++..|.+
T Consensus 544 ~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 544 NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIY 622 (889)
T ss_pred CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhe
Confidence 4566677776665 33223334566777777777776666667777777777777777777766 66777777777777
Q ss_pred eecccccCCCcCcccccCCCCCCEEEccCC
Q 035786 195 LNLASNFFTGQIPSGLYSLSSIQFLNLSDN 224 (693)
Q Consensus 195 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 224 (693)
|++..+.....+|.....+++|++|.+...
T Consensus 623 Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred eccccccccccccchhhhcccccEEEeecc
Confidence 777766655455555555777777766544
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.9e-07 Score=90.08 Aligned_cols=125 Identities=18% Similarity=0.192 Sum_probs=80.7
Q ss_pred eEEEEEeCCCcEEEEEEecccccC---------------------------HHHHHHHHHHHhcCCCCC--ccceeEEEE
Q 035786 527 DLFKGTLAGGTTVVVKKVSLHSFK---------------------------KESYMMELDLFSRVSHAR--LVPLLGQCL 577 (693)
Q Consensus 527 ~Vy~~~~~~g~~vavK~l~~~~~~---------------------------~~~f~~Ei~~l~~l~H~n--iv~l~g~~~ 577 (693)
.||.|.-++|..||||........ +....+|.+.|.++.... +.+.+. +
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~--~ 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYD--Y 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEE--E
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEE--E
Confidence 489999999999999976432100 124567999999998774 445543 2
Q ss_pred cCCCeeEEEEccCC--CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhh-ccCCCCCeEecCCCCCCeeeCC
Q 035786 578 EHETEKLLVYKYMV--CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL-HHECNPPLVHRDVQASSILLDD 654 (693)
Q Consensus 578 ~~~~~~~lv~ey~~--~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yL-H~~~~p~iiHrDlk~~NILld~ 654 (693)
. ...+||||++ +..+..+... . ++......+..++...+..+ |.. +|||+|+.+.||++++
T Consensus 79 ~---~~~ivME~I~~~G~~~~~l~~~-~---------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~ 142 (188)
T PF01163_consen 79 N---RNVIVMEYIGEDGVPLPRLKDV-D---------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDD 142 (188)
T ss_dssp E---TTEEEEE--EETTEEGGCHHHC-G---------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEET
T ss_pred e---CCEEEEEecCCCccchhhHHhc-c---------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeec
Confidence 2 3479999999 5444433221 1 11223455677777766665 555 9999999999999998
Q ss_pred CCceEECCcccccccC
Q 035786 655 KFEVRLGSLSELHAQG 670 (693)
Q Consensus 655 ~~~~ki~Dfgla~~~~ 670 (693)
+ .+.|.|||-+....
T Consensus 143 ~-~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 143 G-KVYIIDFGQAVDSS 157 (188)
T ss_dssp T-CEEE--GTTEEETT
T ss_pred c-eEEEEecCcceecC
Confidence 8 99999999877754
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.9e-08 Score=78.35 Aligned_cols=61 Identities=41% Similarity=0.490 Sum_probs=38.9
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccC
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFF 202 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 202 (693)
++|++|++++|++....+..|.++++|++|++++|.++...|..|..+++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3566666666666655555666666666666666666655555666666666666666653
|
... |
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=98.57 E-value=6.8e-08 Score=92.62 Aligned_cols=61 Identities=18% Similarity=0.139 Sum_probs=53.6
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
|+|.++++... ..++|.++..|+.|+++||+|||+. . ||+|||+++++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~~-------~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~ 61 (176)
T smart00750 1 VSLADILEVRG-------RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTP 61 (176)
T ss_pred CcHHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecc
Confidence 78999997532 3599999999999999999999987 2 999999999999999 999988644
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.9e-08 Score=114.22 Aligned_cols=166 Identities=20% Similarity=0.239 Sum_probs=123.4
Q ss_pred CCccCccccCCeeeEEEEEeC--CCcEEEEEEecccccC---HHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA--GGTTVVVKKVSLHSFK---KESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~--~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ 587 (693)
|...+.||+|+|+.|-..... ....+|+|.+...... .+....|..+=..+. |+|++.+++...+ .+..+++.
T Consensus 22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~-~~~~~~~~ 100 (601)
T KOG0590|consen 22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS-PRSYLLSL 100 (601)
T ss_pred ccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC-Cccccccc
Confidence 344556999999999888753 3557888887654322 223334666666665 9999999986654 46789999
Q ss_pred ccCCCCChhhhh-hccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhc-cCCCCCeEecCCCCCCeeeCCCC-ceEECCcc
Q 035786 588 KYMVCGDLASSL-HRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLH-HECNPPLVHRDVQASSILLDDKF-EVRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l-~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH-~~~~p~iiHrDlk~~NILld~~~-~~ki~Dfg 664 (693)
||..+|++.+.+ +.... ..+-.....+..++..|+.|+| +. .+.|||+||+|.++++.+ ..|++|||
T Consensus 101 ~~s~g~~~f~~i~~~~~~-------~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~ 170 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDST-------GTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFG 170 (601)
T ss_pred CcccccccccccccCCcc-------CCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCch
Confidence 999999999888 43220 1223334457788999999999 66 899999999999999999 99999999
Q ss_pred cccccCC--CCcceeeeeeh-hhhhhhhh
Q 035786 665 ELHAQGD--SHQNVLTRFLW-RQLYQSCM 690 (693)
Q Consensus 665 la~~~~~--~~~~~~~~~~~-~~~y~a~~ 690 (693)
+|..+.. .........+| ++.|+|..
T Consensus 171 ~At~~~~~~g~~~~~~~~~g~s~~y~a~E 199 (601)
T KOG0590|consen 171 LATAYRNKNGAERSLKDRCGSSPPYGAPE 199 (601)
T ss_pred hhccccccCCcceeeecccCCCCCCCCcc
Confidence 9998844 44444556788 88888753
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.6e-08 Score=115.50 Aligned_cols=143 Identities=17% Similarity=0.185 Sum_probs=110.2
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccc--cCHHHHHHHHHH--HhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHS--FKKESYMMELDL--FSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~--~~~~~f~~Ei~~--l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++...+.+|+++|=+|.||+.+.|. |+||..-... ..-+.|.++++- ....+|||.+++.-+- ..+.-.|||=+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~-~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVL-VTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHH-HhhHHHHHHHH
Confidence 4566778999999999999998887 8889874432 223455554433 5566999999887542 23445678888
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+.+ +|.|.|..+ ..|.-.+..-||.|+..|+.-.|.. +|.|+|||++|||+....=+.++||.-.|.
T Consensus 102 yvkh-nLyDRlSTR--------PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKP 169 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTR--------PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKP 169 (1431)
T ss_pred HHhh-hhhhhhccc--------hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCC
Confidence 8876 787776431 3466777778999999999999998 999999999999999999899999976665
Q ss_pred c
Q 035786 669 Q 669 (693)
Q Consensus 669 ~ 669 (693)
.
T Consensus 170 t 170 (1431)
T KOG1240|consen 170 T 170 (1431)
T ss_pred c
Confidence 4
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.50 E-value=5.2e-08 Score=111.29 Aligned_cols=130 Identities=18% Similarity=0.305 Sum_probs=86.1
Q ss_pred CCCCccCccccCCeeeEEEEEeCC-CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
.+|...++|-.|+||.||..+.+. -+.+|+ ++++...- -+||.++- +..+.|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~li---------------lRnilt~a-------~npfvv---- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLI---------------LRNILTFA-------GNPFVV---- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhh-cccccchh---------------hhcccccc-------CCccee----
Confidence 468888999999999999998653 567887 44332211 11222221 122333
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc-
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ- 669 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~- 669 (693)
||=...+..-.. .+++ .+.+++|||+. +|+|||+||.|.|+..-+.+|+.|||+.+..
T Consensus 136 --gDc~tllk~~g~------lPvd----------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GL 194 (1205)
T KOG0606|consen 136 --GDCATLLKNIGP------LPVD----------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGL 194 (1205)
T ss_pred --chhhhhcccCCC------Ccch----------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhh
Confidence 444444432111 1221 27889999988 9999999999999999999999999998873
Q ss_pred -------C------CCCcceeeeeehhhhhhhh
Q 035786 670 -------G------DSHQNVLTRFLWRQLYQSC 689 (693)
Q Consensus 670 -------~------~~~~~~~~~~~~~~~y~a~ 689 (693)
. +.+.-.-..+||||+|+|-
T Consensus 195 ms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaP 227 (1205)
T KOG0606|consen 195 MSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAP 227 (1205)
T ss_pred hhccchhhhcchHHHHHHhhhccccCCccccCh
Confidence 1 1222224457999999984
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.5e-08 Score=105.35 Aligned_cols=161 Identities=18% Similarity=0.186 Sum_probs=105.6
Q ss_pred cCccccCCeeeEEEEEeCC----CcEEEEEEecccc-cCHHHHHHHHHHHhcCCCCCccceeE-----E--EEcC----C
Q 035786 517 TNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHS-FKKESYMMELDLFSRVSHARLVPLLG-----Q--CLEH----E 580 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~-~~~~~f~~Ei~~l~~l~H~niv~l~g-----~--~~~~----~ 580 (693)
.+..++.++|.+..++... .+.++.|+.+.+. ..-....+++-.+....|.+..-+.. . .... .
T Consensus 249 ~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~ 328 (516)
T KOG1033|consen 249 SKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKK 328 (516)
T ss_pred cccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhccccccccc
Confidence 3446666677666665332 2445555554443 22222333444444444443332221 0 0000 0
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
...|+.|+++.-++|++||.+.... ...+|..-+.++.+++.|+.| . ..+|||+||.||....+.+.||
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~-----e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kI 397 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTG-----EERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKI 397 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcc-----cccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhh
Confidence 1357899999999999999754321 347888899999999999999 3 7899999999999999999999
Q ss_pred CCcccccccCCCC-----cceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSH-----QNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~-----~~~~~~~~~~~~y~a 688 (693)
+|||+.--..... ...+|.-+||+|||+
T Consensus 398 gDFgl~ts~~~~~~~~~~~a~~t~~~gt~~Yms 430 (516)
T KOG1033|consen 398 GDFGLVTSQDKDETVAPAAASHTQQVGTLLYMS 430 (516)
T ss_pred hhhhheeecccCCcccchhhhhhhcccccccCC
Confidence 9999977663222 224677889999985
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.1e-08 Score=111.83 Aligned_cols=125 Identities=33% Similarity=0.404 Sum_probs=79.8
Q ss_pred cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcc-cccCCCCCCEEEc
Q 035786 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPS-GLYSLSSIQFLNL 221 (693)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L 221 (693)
.|.+.+.++|.+. .+..++.-++.|+.|||++|+++.. ..+..++.|++|||+.|.+. .+|. ....+. |+.|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 4556666667665 4555666677777777777777643 26667777777777777776 3443 222333 777777
Q ss_pred cCCcccccCCccccCCCCCCEEEccCCcCcccCc-hhhhcCccccccccccccc
Q 035786 222 SDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP-LELRGLRNLAKLVISENGL 274 (693)
Q Consensus 222 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l 274 (693)
.+|.++.. ..+.+|.+|+.||+++|-+.+.-- .-++.+..|++|+|.+|.+
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 77777633 246677777777777777764321 1245566777777777765
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.6e-07 Score=66.14 Aligned_cols=36 Identities=39% Similarity=0.856 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhCCC-C---CCCCCCC--CCCCCCCcceeec
Q 035786 24 AVQRSALLDLRSSLGL-R---SRDWPLR--TEPCRSWRGVQCQ 60 (693)
Q Consensus 24 ~~~~~aLl~~k~~l~~-~---~~~W~~~--~~~C~~W~gv~C~ 60 (693)
++|++||++||+++.. + +.+|+.. .+|| +|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C-~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPC-SWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CC-CSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCe-eeccEEeC
Confidence 5899999999999984 3 5799876 4555 89999996
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.2e-08 Score=109.51 Aligned_cols=179 Identities=31% Similarity=0.386 Sum_probs=123.4
Q ss_pred chHhhhCCCCccEEEecCCCCCcCCCcccCCC-ccCCEEecccCcCC----------ccCccccCCCCCCCEEEccCCCC
Q 035786 110 PEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL-SRLNVLYLSGNSLA----------GNVPATLGELKKLSNLDLSRNLL 178 (693)
Q Consensus 110 p~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l-~~L~~L~Ls~N~l~----------~~~p~~~~~l~~L~~L~Ls~N~l 178 (693)
|-.+. .+.+|++|.|.++.+.. -..+..+ ..|+.|.-+ |.+. |.+-.++ ..-+|...+.++|.+
T Consensus 102 pi~if-pF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~-~Wn~L~~a~fsyN~L 176 (1096)
T KOG1859|consen 102 PISIF-PFRSLRVLELRGCDLST--AKGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSP-VWNKLATASFSYNRL 176 (1096)
T ss_pred Cceec-cccceeeEEecCcchhh--hhhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccch-hhhhHhhhhcchhhH
Confidence 44554 48899999999998763 1111111 234444322 2221 1111111 123577888899998
Q ss_pred CCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCc-cccCCCCCCEEEccCCcCcccCchh
Q 035786 179 TGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPS-EVGNLDKLIELDLSKNSISGSLPLE 257 (693)
Q Consensus 179 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~ 257 (693)
. .+..++.-++.|+.|+|++|+++.. +.+..|+.|++|||+.|.+. .+|. ....+ +|+.|.+++|.++.. ..
T Consensus 177 ~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lrnN~l~tL--~g 249 (1096)
T KOG1859|consen 177 V-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLRNNALTTL--RG 249 (1096)
T ss_pred H-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhh-hheeeeecccHHHhh--hh
Confidence 7 6677888899999999999999854 36788999999999999998 4453 22233 499999999998743 35
Q ss_pred hhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCC
Q 035786 258 LRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLD 300 (693)
Q Consensus 258 ~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~ 300 (693)
+.++++|+.||+++|-|.+.-.-..+..+..|+.|+|.+|.+.
T Consensus 250 ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 250 IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 7889999999999998876422222345677888999999885
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.7e-06 Score=95.35 Aligned_cols=121 Identities=22% Similarity=0.249 Sum_probs=93.8
Q ss_pred eCCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCC
Q 035786 533 LAGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQ 611 (693)
Q Consensus 533 ~~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~ 611 (693)
..++.+|.|...+..... .+...+.++.|+.+|||||++++... +.+...|||.|-+. -|..++.+
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~-e~~~~~ylvTErV~--Pl~~~lk~---------- 100 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTT-EEEGTLYLVTERVR--PLETVLKE---------- 100 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhh-cccCceEEEeeccc--cHHHHHHH----------
Confidence 456888999888654432 34467788999999999999999744 44567899999875 35556643
Q ss_pred CCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 612 SLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 612 ~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+.-....-.+.||+.||-|||++| .++|++|--..|.+++.++.|+++|-++...
T Consensus 101 -l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~ 155 (690)
T KOG1243|consen 101 -LGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKA 155 (690)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEecc
Confidence 223334446788999999999887 7999999999999999999999998776443
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.20 E-value=9e-07 Score=96.45 Aligned_cols=147 Identities=20% Similarity=0.213 Sum_probs=112.0
Q ss_pred HhCCCCccCccccCCeeeEEEEEe--CCCcEEEEEEecccccC--HH-HHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL--AGGTTVVVKKVSLHSFK--KE-SYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~--~~g~~vavK~l~~~~~~--~~-~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
-+.+|.....||.|.|+.||+... .++..+++|.+...... .+ .-..|+-+...+ -|.++|.....+.+ ....
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-~r~~ 341 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-LRQG 341 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc-cccc
Confidence 455688889999999999999875 46889999988654332 11 123455555544 47777775544443 2456
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEECC
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLGS 662 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~D 662 (693)
|+--||+++|+++..+.- ...++...++++..+++.++.|+|.. .++|+|+||+||++..+ +.-+++|
T Consensus 342 ~ip~e~~~~~s~~l~~~~--------~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~ 410 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVT--------SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGD 410 (524)
T ss_pred cCchhhhcCcchhhhhHH--------HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccc
Confidence 788999999999876621 14578888999999999999999966 99999999999999986 8899999
Q ss_pred cccccc
Q 035786 663 LSELHA 668 (693)
Q Consensus 663 fgla~~ 668 (693)
||.+.-
T Consensus 411 ~~~~t~ 416 (524)
T KOG0601|consen 411 FGCWTR 416 (524)
T ss_pred cccccc
Confidence 999863
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.19 E-value=8.1e-06 Score=81.21 Aligned_cols=132 Identities=15% Similarity=0.149 Sum_probs=90.1
Q ss_pred ccCccccCCeeeEEEEEeCCCcEEEEEEecccccC-----------------------HHHHHHHHHHHhcCCCC--Ccc
Q 035786 516 ETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK-----------------------KESYMMELDLFSRVSHA--RLV 570 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~-----------------------~~~f~~Ei~~l~~l~H~--niv 570 (693)
..+.||-|.-+.||.|..+.|..+|||.=..+... +....+|.++|.++.-. .+.
T Consensus 95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP 174 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP 174 (304)
T ss_pred hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence 35789999999999999999999999953221110 12356799999999765 677
Q ss_pred ceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCe
Q 035786 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSI 650 (693)
Q Consensus 571 ~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NI 650 (693)
+.+++ +...+||||+++--|...=- ..-+....+..+++..+ .+| +. +|||+|+..=||
T Consensus 175 ~P~~~-----nRHaVvMe~ieG~eL~~~r~----------~~en~~~il~~il~~~~-~~~--~~---GiVHGDlSefNI 233 (304)
T COG0478 175 KPIAW-----NRHAVVMEYIEGVELYRLRL----------DVENPDEILDKILEEVR-KAY--RR---GIVHGDLSEFNI 233 (304)
T ss_pred Ccccc-----ccceeeeehcccceeecccC----------cccCHHHHHHHHHHHHH-HHH--Hc---CccccCCchheE
Confidence 76642 45689999999865542110 01222333333333222 223 33 799999999999
Q ss_pred eeCCCCceEECCcccccc
Q 035786 651 LLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 651 Lld~~~~~ki~Dfgla~~ 668 (693)
++++|+.+.|.||-=+-.
T Consensus 234 lV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 234 LVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred EEecCCCEEEEeCccccc
Confidence 999999999999965433
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.7e-05 Score=78.37 Aligned_cols=108 Identities=19% Similarity=0.179 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHhcCCCC--CccceeEEEEcCC---CeeEEEEccCCC-CChhhhhhccCCCCCCCCCCCCHHHHHHHHHH
Q 035786 551 KESYMMELDLFSRVSHA--RLVPLLGQCLEHE---TEKLLVYKYMVC-GDLASSLHRVTDLEDDSLQSLDWITRLKIAIG 624 (693)
Q Consensus 551 ~~~f~~Ei~~l~~l~H~--niv~l~g~~~~~~---~~~~lv~ey~~~-GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ 624 (693)
...+.+|.+.+..++.. ...+.++|..... ...++|+|++++ -+|.+++.... ..+-..+..++.+
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--------~~~~~~~~~ll~~ 126 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--------QLDPSQRRELLRA 126 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--------ccchhhHHHHHHH
Confidence 34577888888777543 3556666654322 135899999997 47999886522 1455667889999
Q ss_pred HHHHHhhhccCCCCCeEecCCCCCCeeeCCCC---ceEECCccccccc
Q 035786 625 AAEGLSYLHHECNPPLVHRDVQASSILLDDKF---EVRLGSLSELHAQ 669 (693)
Q Consensus 625 ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~---~~ki~Dfgla~~~ 669 (693)
+++.++-||.. +|+|+|++++|||++.+. ++.+.||+-++..
T Consensus 127 l~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 127 LARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999999999 999999999999999887 8999999987764
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.1e-05 Score=89.46 Aligned_cols=142 Identities=16% Similarity=0.158 Sum_probs=95.9
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc---------------------------C----HH----------
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF---------------------------K----KE---------- 552 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~---------------------------~----~~---------- 552 (693)
|+. +.|+.++-|.||+|++.+|+.||||....+-. . .+
T Consensus 128 F~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~El 206 (517)
T COG0661 128 FEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREEL 206 (517)
T ss_pred cCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHh
Confidence 443 67999999999999999999999998753210 0 01
Q ss_pred HHHHHHHHHhcCC-----CCCccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHH
Q 035786 553 SYMMELDLFSRVS-----HARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE 627 (693)
Q Consensus 553 ~f~~Ei~~l~~l~-----H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~ 627 (693)
+|.+|..-+.+++ .+++.-. ..|++-.+...|+|||++|--+.+...-.. ...+ +-.|+...++
T Consensus 207 Dy~~EA~n~~~~~~nf~~~~~v~VP-~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-------~g~d---~k~ia~~~~~ 275 (517)
T COG0661 207 DYRREAANAERFRENFKDDPDVYVP-KVYWEYTTRRVLTMEWIDGIKISDIAALKS-------AGID---RKELAELLVR 275 (517)
T ss_pred CHHHHHHHHHHHHHHcCCCCCeEec-eeehhccCCcEEEEEeeCCEecccHHHHHh-------cCCC---HHHHHHHHHH
Confidence 2455666665552 3444322 345544467899999999988887743211 1233 3345555444
Q ss_pred H-HhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 628 G-LSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 628 g-l~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+ +.-+-.+ +++|.|..|.||+++.+++.-.-|||+...+.
T Consensus 276 ~f~~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 276 AFLRQLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred HHHHHHHhc---CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 3 2222223 79999999999999999999999999977763
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.3e-06 Score=87.94 Aligned_cols=97 Identities=24% Similarity=0.457 Sum_probs=76.1
Q ss_pred HhcCCCCCccceeEEEEcCC----CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC
Q 035786 561 FSRVSHARLVPLLGQCLEHE----TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC 636 (693)
Q Consensus 561 l~~l~H~niv~l~g~~~~~~----~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~ 636 (693)
+-.+.|-|||++..|+.+.+ .+...+.|||.-|++..+|++-.+. . ..+....-.+++-||..||.|||. |
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~-~---~a~~~~~wkkw~tqIlsal~yLhs-~ 195 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN-Q---KALFQKAWKKWCTQILSALSYLHS-C 195 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh-h---hhhhHHHHHHHHHHHHhhhhhhhc-c
Confidence 44557999999998875432 2467899999999999999864321 1 223333335688999999999996 7
Q ss_pred CCCeEecCCCCCCeeeCCCCceEECC
Q 035786 637 NPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 637 ~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.|+|+|+++..+-|.+..++-+||+-
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIkig~ 221 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKIGS 221 (458)
T ss_pred CCccccCCcchhheeecCCceEEecc
Confidence 99999999999999999999999853
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=98.12 E-value=7.6e-06 Score=79.25 Aligned_cols=104 Identities=23% Similarity=0.266 Sum_probs=81.8
Q ss_pred HHHHHHhcCCC-CCccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc
Q 035786 556 MELDLFSRVSH-ARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH 634 (693)
Q Consensus 556 ~Ei~~l~~l~H-~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~ 634 (693)
.|.-++..+.+ +++.+++|+|- .+.|.||.+.+++...-.. -.....-+|.+|.+||.++.+.++++++
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG-----~~~v~E~~~~~~~~~~~~~-----l~~~~~~~w~~R~~iA~~lL~~l~~l~~ 77 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCG-----RFYVVEYVGAGSLYGIYRP-----LSQFLQSPWEQRAKIALQLLELLEELDH 77 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECC-----CEEEEEeecCccccccccc-----cccccccCHHHHHHHHHHHHHHHHHHhc
Confidence 47778888876 58999999992 3789999998876432000 0001236899999999999999999998
Q ss_pred CCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 635 ECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 635 ~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
...-.+.-.|++++|+-+++++++|+.|...+-..
T Consensus 78 ~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 78 GPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred CCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 75556888999999999999999999998776554
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.2e-05 Score=85.89 Aligned_cols=141 Identities=15% Similarity=0.186 Sum_probs=104.5
Q ss_pred eeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEc---CCCeeEEEEccCCC-CChhhhh
Q 035786 526 GDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLE---HETEKLLVYKYMVC-GDLASSL 599 (693)
Q Consensus 526 G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~---~~~~~~lv~ey~~~-GsL~~~l 599 (693)
-..||+.- .||..++.||+...+.+ ...-..-+++++++.|+|+|++..++.. .+....+||+|.|+ ++|.++-
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 36799985 58999999999443322 2223456789999999999999887642 23457899999995 6776654
Q ss_pred hccCCCC-------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 600 HRVTDLE-------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 600 ~~~~~~~-------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
-...... ..............++.|++.||.++|+. +..-+-|.+++||++.+++++|+--|.-.++
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 3211100 11123466777889999999999999998 8888999999999999999999877776655
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=4.8e-05 Score=74.04 Aligned_cols=138 Identities=13% Similarity=0.098 Sum_probs=101.1
Q ss_pred cccCCeeeEEEEEeCCCcEEEEEEeccc-------ccCHHHHHHHHHHHhcCCCCC--ccceeEEEE-cCC---CeeEEE
Q 035786 520 IKKGHSGDLFKGTLAGGTTVVVKKVSLH-------SFKKESYMMELDLFSRVSHAR--LVPLLGQCL-EHE---TEKLLV 586 (693)
Q Consensus 520 ig~G~~G~Vy~~~~~~g~~vavK~l~~~-------~~~~~~f~~Ei~~l~~l~H~n--iv~l~g~~~-~~~---~~~~lv 586 (693)
-|+||-.-||+-.+. |+.+-||+-... ...+..|.+|...+.+++..+ +.+.. |+- ... -..+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 377888889998876 447899987521 123568999999999986433 34444 332 111 236799
Q ss_pred EccCCC-CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc--eEECCc
Q 035786 587 YKYMVC-GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE--VRLGSL 663 (693)
Q Consensus 587 ~ey~~~-GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~--~ki~Df 663 (693)
+|-+++ -||.+++.... ....+...+..+..++|+.++-||.. ++.|+|+-+.||+++.++. +++.||
T Consensus 104 Te~L~g~~~L~~~l~~~~------~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDl 174 (216)
T PRK09902 104 TEDMAGFISIADWYAQHA------VSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDL 174 (216)
T ss_pred EEeCCCCccHHHHHhcCC------cCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEh
Confidence 997763 58888875422 12467778889999999999999998 9999999999999986555 899998
Q ss_pred ccccc
Q 035786 664 SELHA 668 (693)
Q Consensus 664 gla~~ 668 (693)
--.+.
T Consensus 175 Ek~r~ 179 (216)
T PRK09902 175 EKSRR 179 (216)
T ss_pred hccch
Confidence 66554
|
|
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.2e-05 Score=86.83 Aligned_cols=140 Identities=16% Similarity=0.088 Sum_probs=90.8
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEEecccccC--------------------------------------HHHHHHHHH
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK--------------------------------------KESYMMELD 559 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~--------------------------------------~~~f~~Ei~ 559 (693)
+.||.-+.|.||+|++++|+.||||.-..+-.. +=+|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 579999999999999999999999986432100 013666665
Q ss_pred HHhcC----CCCCc---cceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhh
Q 035786 560 LFSRV----SHARL---VPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL 632 (693)
Q Consensus 560 ~l~~l----~H~ni---v~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yL 632 (693)
-..++ +|-+. |..=..+++-...+.|+||||+|.-+.|.-.-.. ..++-.....-+.++..-+-+-
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~-------~gi~~~~i~~~l~~~~~~qIf~ 319 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK-------RGISPHDILNKLVEAYLEQIFK 319 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH-------cCCCHHHHHHHHHHHHHHHHHh
Confidence 54444 45551 1111234433457899999999988876543211 1244443333333322222222
Q ss_pred ccCCCCCeEecCCCCCCeeeCC----CCceEECCccccccc
Q 035786 633 HHECNPPLVHRDVQASSILLDD----KFEVRLGSLSELHAQ 669 (693)
Q Consensus 633 H~~~~p~iiHrDlk~~NILld~----~~~~ki~Dfgla~~~ 669 (693)
| +++|.|=.|.||+++. +.++.+-|||+.+..
T Consensus 320 ~-----GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 320 T-----GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred c-----CCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 2 7999999999999994 678999999998775
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.2e-06 Score=86.98 Aligned_cols=211 Identities=28% Similarity=0.302 Sum_probs=95.7
Q ss_pred CCCccEEEecCCCCCcCCC-ccc-CCCccCCEEecccCcCCc--cCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCC
Q 035786 117 LPALQVLDLRSCSLSGSIP-GSF-GNLSRLNVLYLSGNSLAG--NVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNL 192 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p-~~~-~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 192 (693)
+..++.|.+.++.+...-. ..| ...+.++.|||.+|.++. .+-..+.+||.|+.|+|+.|.+...|-..-..+.+|
T Consensus 44 ~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl 123 (418)
T KOG2982|consen 44 LRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNL 123 (418)
T ss_pred ccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccce
Confidence 3344455555554432110 112 234566677777776652 233345566777777777776664432211244566
Q ss_pred CeeecccccCCCc-CcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCc--hhhhcCcccccccc
Q 035786 193 TRLNLASNFFTGQ-IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP--LELRGLRNLAKLVI 269 (693)
Q Consensus 193 ~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p--~~~~~l~~L~~L~L 269 (693)
+.|-|.+..+.-. .-..+..++.++.|.+|.|++. .+++..|.....-| ..+..++.+..+++
T Consensus 124 ~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~r--------------q~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~ 189 (418)
T KOG2982|consen 124 RVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLR--------------QLNLDDNCIEDWSTEVLTLHQLPCLEQLWL 189 (418)
T ss_pred EEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhh--------------hhccccccccccchhhhhhhcCCcHHHHHH
Confidence 6666665544321 2233445555566666555332 12222222221111 11233344445555
Q ss_pred ccccccccCCCcccCCCCCCCEEEccCCcCCCc-CcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCcc
Q 035786 270 SENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGA-LPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNML 348 (693)
Q Consensus 270 s~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~-~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l 348 (693)
+-|++... | +++..+.+..|.+... --......|.+..|+|+.|+|...-.....+.++.+..|.+++|.+
T Consensus 190 ~~~~l~r~-----F---pnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl 261 (418)
T KOG2982|consen 190 NKNKLSRI-----F---PNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPL 261 (418)
T ss_pred HHHhHHhh-----c---ccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcc
Confidence 55555421 2 2344445555544321 1122233445556666666664222222234444555555555555
Q ss_pred c
Q 035786 349 Y 349 (693)
Q Consensus 349 ~ 349 (693)
.
T Consensus 262 ~ 262 (418)
T KOG2982|consen 262 S 262 (418)
T ss_pred c
Confidence 4
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.04 E-value=3.4e-07 Score=80.90 Aligned_cols=104 Identities=30% Similarity=0.373 Sum_probs=59.6
Q ss_pred CCEEEccCCCCCCcCchhh---hcCcCCCeeecccccCCCcCcccc-cCCCCCCEEEccCCcccccCCccccCCCCCCEE
Q 035786 168 LSNLDLSRNLLTGEIPNAI---SLLGNLTRLNLASNFFTGQIPSGL-YSLSSIQFLNLSDNALTGFIPSEVGNLDKLIEL 243 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 243 (693)
+..+||+++++- .+++.. .....|+..+|++|.|.. +|..| ...+.++.|+|++|.++ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 444555555543 233332 233344455666666653 33333 23446666677777666 466667777777777
Q ss_pred EccCCcCcccCchhhhcCcccccccccccccc
Q 035786 244 DLSKNSISGSLPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 244 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
+++.|.+. ..|..+..+.+|..|+..+|.+.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 77777766 34555555666777776666654
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.04 E-value=9.6e-07 Score=87.66 Aligned_cols=194 Identities=27% Similarity=0.298 Sum_probs=120.8
Q ss_pred HhhhCCCCccEEEecCCCCCcC--CCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCc-Cchhhhc
Q 035786 112 WFGYRLPALQVLDLRSCSLSGS--IPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGE-IPNAISL 188 (693)
Q Consensus 112 ~~~~~l~~L~~L~Ls~n~l~g~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~ 188 (693)
.|+...+.++.|||.+|.++.. |-.-+.+|+.|++|+|+.|.+...|-..-..+.+|+.|-|.+..+.-. ....+..
T Consensus 65 ~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~ 144 (418)
T KOG2982|consen 65 LFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDD 144 (418)
T ss_pred HHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhc
Confidence 4555678889999999988753 344567889999999999998865543224667899999888776532 3345667
Q ss_pred CcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCc--cccCCCCCCEEEccCCcCcccCchhhhcCccccc
Q 035786 189 LGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPS--EVGNLDKLIELDLSKNSISGSLPLELRGLRNLAK 266 (693)
Q Consensus 189 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 266 (693)
++.++.|.++.|.+. .+++..|.....-|. .+..++.+..+.++-|++.. -++++..
T Consensus 145 lP~vtelHmS~N~~r--------------q~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r-------~Fpnv~s 203 (418)
T KOG2982|consen 145 LPKVTELHMSDNSLR--------------QLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSR-------IFPNVNS 203 (418)
T ss_pred chhhhhhhhccchhh--------------hhccccccccccchhhhhhhcCCcHHHHHHHHHhHHh-------hcccchh
Confidence 888888888887543 233344433321111 01111222223333344432 2356666
Q ss_pred cccccccccccCCCcccCCCCCCCEEEccCCcCCCcC-cccccCCCCCCEEEccCCcCccc
Q 035786 267 LVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGAL-PATLFLRPNLRFLDLSRNNITGS 326 (693)
Q Consensus 267 L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~-p~~l~~~~~L~~L~Ls~N~l~g~ 326 (693)
+.+..|.+...-.+.-+..++.+..|+|+.|++...- -+.+..+++|..|.+++|.+...
T Consensus 204 v~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~ 264 (418)
T KOG2982|consen 204 VFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDP 264 (418)
T ss_pred eeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccccc
Confidence 7777776654433334455666778888888886432 23456778899999999888643
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 693 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 2e-29 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 5e-28 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 4e-24 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 5e-24 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 1e-21 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 2e-19 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 6e-13 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 7e-16 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 8e-16 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 5e-13 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 6e-13 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 8e-13 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-11 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-09 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 6e-09 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 6e-08 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 7e-08 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 7e-08 | ||
| 3kj4_A | 286 | Structure Of Rat Nogo Receptor Bound To 1d9 Antagon | 1e-07 | ||
| 2o6q_A | 270 | Structural Diversity Of The Hagfish Variable Lympho | 2e-07 | ||
| 3ul8_A | 279 | Crystal Structure Of The Tv3 Mutant V134l Length = | 3e-07 | ||
| 1p8t_A | 285 | Crystal Structure Of Nogo-66 Receptor Length = 285 | 4e-07 | ||
| 3ula_A | 279 | Crystal Structure Of The Tv3 Mutant F63w-Md-2-Erito | 4e-07 | ||
| 1ozn_A | 285 | 1.5a Crystal Structure Of The Nogo Receptor Ligand | 4e-07 | ||
| 3ul7_A | 278 | Crystal Structure Of The Tv3 Mutant F63w Length = 2 | 4e-07 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 5e-07 | ||
| 2z62_A | 276 | Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 A | 5e-07 | ||
| 3ul9_A | 278 | Structure Of The Tv3 Mutant M41e Length = 278 | 5e-07 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 6e-07 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 7e-07 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 7e-07 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 7e-07 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 8e-07 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 8e-07 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 8e-07 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 9e-07 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 9e-07 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 9e-07 | ||
| 1xcd_A | 329 | Dimeric Bovine Tissue-Extracted Decorin, Crystal Fo | 1e-06 | ||
| 1xku_A | 330 | Crystal Structure Of The Dimeric Protein Core Of De | 1e-06 | ||
| 3v47_A | 455 | Crystal Structure Of The N-Tetminal Fragment Of Zeb | 1e-06 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-06 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 2e-06 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-06 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 2e-06 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 2e-06 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 2e-06 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-06 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 4e-06 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 4e-06 | ||
| 3zyj_A | 440 | Netring1 In Complex With Ngl1 Length = 440 | 5e-06 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 1e-05 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 1e-05 | ||
| 3t6q_A | 606 | Crystal Structure Of Mouse Rp105MD-1 Complex Length | 1e-05 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 1e-05 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 1e-05 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 2e-05 | ||
| 4g8a_A | 635 | Crystal Structure Of Human Tlr4 Polymorphic Variant | 2e-05 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 2e-05 | ||
| 3fxi_A | 605 | Crystal Structure Of The Human Tlr4-Human Md-2-E.Co | 3e-05 | ||
| 3o6n_A | 390 | Crystal Structure Of Apl1 Leucine-Rich Repeat Domai | 3e-05 | ||
| 2z63_A | 570 | Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 A | 3e-05 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 3e-05 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 3e-05 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 3e-05 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 3e-05 | ||
| 3j0a_A | 844 | Homology Model Of Human Toll-Like Receptor 5 Fitted | 4e-05 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 4e-05 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 4e-05 | ||
| 3oja_B | 597 | Crystal Structure Of Lrim1APL1C COMPLEX Length = 59 | 4e-05 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 5e-05 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 6e-05 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 6e-05 | ||
| 3m18_A | 251 | Crystal Structure Of Variable Lymphocyte Receptor V | 6e-05 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 7e-05 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-04 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 1e-04 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 1e-04 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 1e-04 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 1e-04 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 1e-04 | ||
| 2id5_A | 477 | Crystal Structure Of The Lingo-1 Ectodomain Length | 1e-04 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 1e-04 | ||
| 2z66_A | 306 | Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 A | 1e-04 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 2e-04 | ||
| 1m10_B | 290 | Crystal Structure Of The Complex Of Glycoprotein Ib | 2e-04 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 2e-04 | ||
| 3m19_A | 251 | Crystal Structure Of Variable Lymphocyte Receptor V | 3e-04 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 3e-04 | ||
| 1m0z_A | 290 | Crystal Structure Of The Von Willebrand Factor Bind | 3e-04 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 3e-04 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 3e-04 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 3e-04 | ||
| 1w8a_A | 192 | Third Lrr Domain Of Drosophila Slit Length = 192 | 4e-04 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 4e-04 | ||
| 3p72_A | 269 | Structure Of Platelet Glycoprotein 1b Alpha With A | 4e-04 | ||
| 1u0n_D | 265 | The Ternary Von Willebrand Factor A1-Glycoprotein I | 4e-04 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 4e-04 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 4e-04 | ||
| 1sq0_B | 288 | Crystal Structure Of The Complex Of The Wild-Type V | 4e-04 | ||
| 1p9a_G | 290 | Crystal Structure Of N-terminal Domain Of Human Pla | 4e-04 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 5e-04 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 5e-04 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 5e-04 | ||
| 3pmh_G | 290 | Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib | 5e-04 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 5e-04 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 5e-04 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 5e-04 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 5e-04 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 5e-04 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 5e-04 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 5e-04 | ||
| 1ook_G | 290 | Crystal Structure Of The Complex Of Platelet Recept | 5e-04 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 6e-04 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 6e-04 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 6e-04 | ||
| 1p8v_A | 279 | Crystal Structure Of The Complex Of Platelet Recept | 6e-04 | ||
| 1gwb_B | 281 | Structure Of Glycoprotein 1b Length = 281 | 7e-04 | ||
| 3e6j_A | 229 | Crystal Structure Of Variable Lymphocyte Receptor ( | 7e-04 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 7e-04 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 7e-04 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 7e-04 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 8e-04 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 8e-04 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 8e-04 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 9e-04 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist Antibody Length = 286 | Back alignment and structure |
|
| >pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors A29 Length = 270 | Back alignment and structure |
|
| >pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l Length = 279 | Back alignment and structure |
|
| >pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor Length = 285 | Back alignment and structure |
|
| >pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran Complex Length = 279 | Back alignment and structure |
|
| >pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding Domain Reveals A Convergent Recognition Scaffold Mediating Inhibition Of Myelination Length = 285 | Back alignment and structure |
|
| >pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w Length = 278 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And Hagfish Vlrb.61 Length = 276 | Back alignment and structure |
|
| >pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e Length = 278 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1 Length = 329 | Back alignment and structure |
|
| >pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin, The Archetypal Small Leucine-Rich Repeat Proteoglycan Length = 330 | Back alignment and structure |
|
| >pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish Tlr5 In Complex With Salmonella Flagellin Length = 455 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1 Length = 440 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex Length = 606 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g And T399i In Complex With Md-2 And Lps Length = 635 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps Ra Complex Length = 605 | Back alignment and structure |
|
| >pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain Length = 390 | Back alignment and structure |
|
| >pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And Hagfish Vlrb.61 Length = 570 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into An Electron Microscopy Single Particle Reconstruction Length = 844 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX Length = 597 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor Vlra.R2.1 In Complex With Hen Egg Lysozyme Length = 251 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain Length = 477 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And Hagfish Vlrb.61 Length = 306 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha And The Von Willebrand Factor A1 Domain Length = 290 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor Vlra.R5.1 Length = 251 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding Domain Of Glycoprotein Ib Alpha Length = 290 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit Length = 192 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound Peptide Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha- Botrocetin Complex Length = 265 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At 2.6 Angstrom Resolution Length = 288 | Back alignment and structure |
|
| >pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet Receptor Glycoprotein Ib-alpha At 1.7 Angstrom Resolution Length = 290 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib Interaction With Two Distinct Alpha-Thrombin Sites Length = 290 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor Gpib-alpha And Human Alpha-thrombin Length = 290 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor Gpib-alpha And Alpha-thrombin At 2.6a Length = 279 | Back alignment and structure |
|
| >pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b Length = 281 | Back alignment and structure |
|
| >pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr) Rbc36 In Complex With H-Trisaccharide Length = 229 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 252 bits (647), Expect = 7e-74
Identities = 100/363 (27%), Positives = 156/363 (42%), Gaps = 30/363 (8%)
Query: 26 QRSALLDLRSSLGLRSR--DWPLRTEPCRSWRGVQCQNGQVIAINISGFK-RTRIGRLNP 82
+ L+ + L ++ DW PC ++ GV C++ +V +I++S ++
Sbjct: 13 EIHQLISFKDVLPDKNLLPDWSSNKNPC-TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSS 71
Query: 83 RFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP--GSFGN 140
SL +LT L S S + GS+ F +L LDL SLSG + S G+
Sbjct: 72 -----SLLSLTGLESLFLSNSHINGSVSG-FK-CSASLTSLDLSRNSLSGPVTTLTSLGS 124
Query: 141 LSRLNVLYLSGNSLAGNVPATLG-ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL---N 196
S L L +S N+L + G +L L LDLS N ++G L L
Sbjct: 125 CSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLA 184
Query: 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPL 256
++ N +G + +++FL++S N + IP +G+ L LD+S N +SG
Sbjct: 185 ISGNKISGDVDVS--RCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSR 241
Query: 257 ELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRF 315
+ L L IS N G + LQ + L+ NK G +P L L
Sbjct: 242 AISTCTELKLLNISSNQFVGPIPPLPLK---SLQYLSLAENKFTGEIPDFLSGACDTLTG 298
Query: 316 LDLSRNNITGSWPILSTNGNASG-AVFNISNNMLYGDLNSSSFRKFS---LIDLSSNYFQ 371
LDLS N+ G+ P G+ S +S+N G+L + K ++DLS N F
Sbjct: 299 LDLSGNHFYGAVP--PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFS 356
Query: 372 GTV 374
G +
Sbjct: 357 GEL 359
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 240 bits (614), Expect = 3e-69
Identities = 96/291 (32%), Positives = 149/291 (51%), Gaps = 10/291 (3%)
Query: 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLS 150
L L + + G IP++ L LDL G++P FG+ S L L LS
Sbjct: 267 PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALS 326
Query: 151 GNSLAGNVPA-TLGELKKLSNLDLSRNLLTGEIPNAIS-LLGNLTRLNLASNFFTGQIPS 208
N+ +G +P TL +++ L LDLS N +GE+P +++ L +L L+L+SN F+G I
Sbjct: 327 SNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILP 386
Query: 209 GL--YSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAK 266
L +++Q L L +N TG IP + N +L+ L LS N +SG++P L L L
Sbjct: 387 NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRD 446
Query: 267 LVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS 326
L + N LEG++ + L + L+ + L N L G +P+ L NL ++ LS N +TG
Sbjct: 447 LKLWLNMLEGEIPQELM-YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505
Query: 327 WPILSTNGNASG-AVFNISNNMLYGDLNSS--SFRKFSLIDLSSNYFQGTV 374
P G A+ +SNN G++ + R +DL++N F GT+
Sbjct: 506 IP--KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 237 bits (607), Expect = 3e-68
Identities = 94/293 (32%), Positives = 132/293 (45%), Gaps = 15/293 (5%)
Query: 89 LGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLY 148
L SG + G + R L+ LD+ S + S IP G+ S L L
Sbjct: 174 SDGCGELKHLAISGNKISGDVDVS---RCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLD 229
Query: 149 LSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPS 208
+SGN L+G+ + +L L++S N G IP L +L L+LA N FTG+IP
Sbjct: 230 ISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPD 287
Query: 209 GLY-SLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLE-LRGLRNLAK 266
L + ++ L+LS N G +P G+ L L LS N+ SG LP++ L +R L
Sbjct: 288 FLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKV 347
Query: 267 LVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF--LRPNLRFLDLSRNNIT 324
L +S N G+L E L L +DLS N G + L + L+ L L N T
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 325 GSWPILSTNGNASG-AVFNISNNMLYGDLNSS--SFRKFSLIDLSSNYFQGTV 374
G I T N S ++S N L G + SS S K + L N +G +
Sbjct: 408 GK--IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 232 bits (593), Expect = 2e-66
Identities = 84/311 (27%), Positives = 129/311 (41%), Gaps = 26/311 (8%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGN--LSRL 144
D+L + L + S G +PE +L LDL S + SG I + + L
Sbjct: 337 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 396
Query: 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG 204
LYL N G +P TL +L +L LS N L+G IP+++ L L L L N G
Sbjct: 397 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 456
Query: 205 QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNL 264
+IP L + +++ L L N LTG IPS + N L + LS N ++G +P + L NL
Sbjct: 457 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 516
Query: 265 AKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPN------------ 312
A L +S N G + L L +DL+ N +G +PA +F +
Sbjct: 517 AILKLSNNSFSGNIPAELG-DCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRY 575
Query: 313 --------LRFLDLSRNNITGSWPILSTNGNASG-AVFNISNNMLYGDLNSS--SFRKFS 361
+ + N + S NI++ + G + + +
Sbjct: 576 VYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMM 635
Query: 362 LIDLSSNYFQG 372
+D+S N G
Sbjct: 636 FLDMSYNMLSG 646
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 228 bits (584), Expect = 5e-65
Identities = 91/300 (30%), Positives = 139/300 (46%), Gaps = 5/300 (1%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLS-RLNV 146
G+ +LL S S + G +P ++ L+VLDL SG +P S NLS L
Sbjct: 313 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 372
Query: 147 LYLSGNSLAGNVPATLGE--LKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG 204
L LS N+ +G + L + L L L N TG+IP +S L L+L+ N+ +G
Sbjct: 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 432
Query: 205 QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNL 264
IPS L SLS ++ L L N L G IP E+ + L L L N ++G +P L NL
Sbjct: 433 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNL 492
Query: 265 AKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
+ +S N L G++ + + L+ L ++ LS N G +PA L +L +LDL+ N
Sbjct: 493 NWISLSNNRLTGEIPKWIG-RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFN 551
Query: 325 GSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRGRNVSL 384
G+ P + + N Y + + +K + FQG ++ R +
Sbjct: 552 GTIP-AAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTR 610
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 213 bits (545), Expect = 1e-59
Identities = 85/293 (29%), Positives = 128/293 (43%), Gaps = 15/293 (5%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
+L N + L S + S L G+IP G L L+ L L L G IP + L
Sbjct: 412 PTLSNCSELVSLHLSFNYLSGTIPSSLG-SLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQI 206
L L N L G +P+ L L+ + LS N LTGEIP I L NL L L++N F+G I
Sbjct: 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 530
Query: 207 PSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAK 266
P+ L S+ +L+L+ N G IP+ + ++ N I+G + ++ +
Sbjct: 531 PAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ----SGKIAANFIAGKRYVYIKNDGMKKE 586
Query: 267 LVISENGLE--GQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
+ N LE G SE L L +++ G T ++ FLD+S N ++
Sbjct: 587 CHGAGNLLEFQGIRSEQLN-RLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLS 645
Query: 325 GSWPILSTNGNASG-AVFNISNNMLYGDLNSSSFRKFSLI---DLSSNYFQGT 373
G I G+ + N+ +N + G + + DLSSN G
Sbjct: 646 GY--IPKEIGSMPYLFILNLGHNDISGSI-PDEVGDLRGLNILDLSSNKLDGR 695
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 195 bits (498), Expect = 2e-53
Identities = 74/244 (30%), Positives = 111/244 (45%), Gaps = 8/244 (3%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
L N T L+ + S L G IP+W G RL L +L L + S SG+IP G+ L
Sbjct: 484 SGLSNCTNLNWISLSNNRLTGEIPKWIG-RLENLAILKLSNNSFSGNIPAELGDCRSLIW 542
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF--FTG 204
L L+ N G +PA + + ++ N + G+ I G + A N F G
Sbjct: 543 LDLNTNLFNGTIPAAMFKQS----GKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQG 598
Query: 205 QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNL 264
L LS+ N++ G N ++ LD+S N +SG +P E+ + L
Sbjct: 599 IRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYL 658
Query: 265 AKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
L + N + G + + L L ++DLS NKLDG +P + L +DLS NN++
Sbjct: 659 FILNLGHNDISGSIPDE-VGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717
Query: 325 GSWP 328
G P
Sbjct: 718 GPIP 721
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 161 bits (410), Expect = 9e-42
Identities = 51/215 (23%), Positives = 85/215 (39%), Gaps = 11/215 (5%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
LG+ L + + G+IP Q + + ++G N
Sbjct: 532 AELGDCRSLIWLDLNTNLFNGTIPAAMF-----KQSGKIAANFIAGKRYVYIKNDGMKKE 586
Query: 147 LYLSGN--SLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG 204
+ +GN G L L + +++ + G G++ L+++ N +G
Sbjct: 587 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSG 646
Query: 205 QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNL 264
IP + S+ + LNL N ++G IP EVG+L L LDLS N + G +P + L L
Sbjct: 647 YIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 706
Query: 265 AKLVISENGLEGQL-SEGLFPTLDQLQVVDLSGNK 298
++ +S N L G + G F T N
Sbjct: 707 TEIDLSNNNLSGPIPEMGQFETFP---PAKFLNNP 738
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 237 bits (606), Expect = 1e-72
Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 43/333 (12%)
Query: 27 RSALLDLRSSLG----LRSRDWPLRTEPCR-SWRGVQCQNGQVIAINISGFKRTRIGRLN 81
+ ALL ++ LG L S W T+ C +W GV C
Sbjct: 8 KQALLQIKKDLGNPTTLSS--WLPTTDCCNRTWLGVLC---------------------- 43
Query: 82 PRFAVDSLGNLTLLSSFNASGLSLPGS--IPEWFGYRLPALQVLDLRS-CSLSGSIPGSF 138
D+ +++ + SGL+LP IP LP L L + +L G IP +
Sbjct: 44 -----DTDTQTYRVNNLDLSGLNLPKPYPIPSSLA-NLPYLNFLYIGGINNLVGPIPPAI 97
Query: 139 GNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198
L++L+ LY++ +++G +P L ++K L LD S N L+G +P +IS L NL +
Sbjct: 98 AKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157
Query: 199 SNFFTGQIPSGLYSLSS-IQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLE 257
N +G IP S S + +S N LTG IP NL L +DLS+N + G +
Sbjct: 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVL 216
Query: 258 LRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLD 317
+N K+ +++N L L + L +DL N++ G LP L L L+
Sbjct: 217 FGSDKNTQKIHLAKNSLAFDLGK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 318 LSRNNITGSWPILSTNGNASGAVFNISNNMLYG 350
+S NN+ G P + + +N L G
Sbjct: 275 VSFNNLCGEIPQGGNLQRFDVSAY-ANNKCLCG 306
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 193 bits (493), Expect = 2e-56
Identities = 68/295 (23%), Positives = 120/295 (40%), Gaps = 59/295 (20%)
Query: 88 SLGNLTLLSSFNAS----GLSLPGSIPEWFGYRLPALQVLDLRSCSLSGS--IPGSFGNL 141
LGN T LSS+ + + G + + + + LDL +L IP S NL
Sbjct: 17 DLGNPTTLSSWLPTTDCCNRTWLGVLCDTDT-QTYRVNNLDLSGLNLPKPYPIPSSLANL 75
Query: 142 SRLNVLYLSG-NSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200
LN LY+ G N+L G +P + +L +L L ++ ++G IP+ +S + L L+ + N
Sbjct: 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYN 135
Query: 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIE-LDLSKNSISGSLPLELR 259
+G +P + SL ++ + N ++G IP G+ KL + +S+N ++G +P
Sbjct: 136 ALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTF- 194
Query: 260 GLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLS 319
L+ L VDLS N L+G N + + L+
Sbjct: 195 ----------------ANLN---------LAFVDLSRNMLEGDASVLFGSDKNTQKIHLA 229
Query: 320 RNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTV 374
+N++ + + + +DL +N GT+
Sbjct: 230 KNSLAFDLGKVG------------------------LSKNLNGLDLRNNRIYGTL 260
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 189 bits (483), Expect = 8e-55
Identities = 75/200 (37%), Positives = 114/200 (57%), Gaps = 13/200 (6%)
Query: 485 STPPPKDPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKV 544
P +DP + G F+ +L A+ NFS N++ +G G ++KG LA GT V VK++
Sbjct: 3 DVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL 62
Query: 545 SLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHR 601
+ + + E+++ S H L+ L G C+ TE+LLVY YM G +AS L
Sbjct: 63 KEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFCMT-PTERLLVYPYMANGSVASCLRE 120
Query: 602 VTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
+S LDW R +IA+G+A GL+YLH C+P ++HRDV+A++ILLD++FE +G
Sbjct: 121 ----RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176
Query: 662 --SLSELHAQGDSHQNVLTR 679
L++L D+H V T
Sbjct: 177 DFGLAKLMDYKDTH--VTTA 194
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 182 bits (465), Expect = 2e-49
Identities = 72/304 (23%), Positives = 118/304 (38%), Gaps = 21/304 (6%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
+ + L+S + ++ PE +LP L+VL+L+ LS +F + L
Sbjct: 43 ANFTRYSQLTSLDVGFNTISKLEPELCQ-KLPMLKVLNLQHNELSQLSDKTFAFCTNLTE 101
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQI 206
L+L NS+ + K L LDLS N L+ L NL L L++N
Sbjct: 102 LHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK 161
Query: 207 PSGLYSL--SSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELR---GL 261
L SS++ L LS N + F P + +L L L+ + SL +L
Sbjct: 162 SEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELAN 221
Query: 262 RNLAKLVISENGLEGQLSEGLFPTLD--QLQVVDLSGNKLDGALPATLFLRPNLRFLDLS 319
++ L +S + L S F L L ++DLS N L+ + P L + L
Sbjct: 222 TSIRNLSLSNSQLST-TSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLE 280
Query: 320 RNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSL-----------IDLSSN 368
NNI + S +G + N+ + ++ +S K +++ N
Sbjct: 281 YNNIQHLFSH-SLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDN 339
Query: 369 YFQG 372
G
Sbjct: 340 DIPG 343
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 182 bits (463), Expect = 4e-49
Identities = 73/318 (22%), Positives = 125/318 (39%), Gaps = 22/318 (6%)
Query: 87 DSLGNLTLLSSFNASG--LSLPGSIPEWF-GYRLPALQVLDLRSCSLSGSIPGSFGNLSR 143
+ L L + S SL E F L +L+L +S +F L
Sbjct: 347 NMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGH 406
Query: 144 LNVLYLSGNSLAGNVPA-TLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFF 202
L VL L N + + L+ + + LS N N+ +L+ +L RL L
Sbjct: 407 LEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVAL 466
Query: 203 TG--QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSIS--------G 252
PS L ++ L+LS+N + + L+KL LDL N+++ G
Sbjct: 467 KNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPG 526
Query: 253 SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPN 312
L+GL +L L + NG + + +F L +L+++DL N L+ + + +
Sbjct: 527 GPIYFLKGLSHLHILNLESNGFDE-IPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVS 585
Query: 313 LRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS-SSFRKF------SLIDL 365
L+ L+L +N IT + + ++ N S + F + ++ +L
Sbjct: 586 LKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPEL 645
Query: 366 SSNYFQGTVADDRGRNVS 383
SS+Y T G V
Sbjct: 646 SSHYLCNTPPHYHGFPVR 663
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 3e-47
Identities = 64/274 (23%), Positives = 109/274 (39%), Gaps = 14/274 (5%)
Query: 108 SIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167
+P+ + VL+L L +F S+L L + N+++ P +L
Sbjct: 18 QVPDDL---PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPM 74
Query: 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT 227
L L+L N L+ + NLT L+L SN + ++ L+LS N L+
Sbjct: 75 LKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLS 134
Query: 228 GFIPSEVGNLDKLIELDLSKNSISGSLP--LELRGLRNLAKLVISENGLEGQLSEGLFPT 285
L+ L EL LS N I L++ +L KL +S N ++ S G F
Sbjct: 135 STKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKE-FSPGCFHA 193
Query: 286 LDQLQVVDLSGNKLDGALPATLFLR---PNLRFLDLSRNNITGSWPILSTNGNASG-AVF 341
+ +L + L+ +L +L L L ++R L LS + ++ + + +
Sbjct: 194 IGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTML 253
Query: 342 NISNNMLYGDLNSSSFRKFS---LIDLSSNYFQG 372
++S N L + + SF L N Q
Sbjct: 254 DLSYNNLNV-VGNDSFAWLPQLEYFFLEYNNIQH 286
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 2e-45
Identities = 63/299 (21%), Positives = 113/299 (37%), Gaps = 19/299 (6%)
Query: 91 NLTLLSSFNASGLSLPGSIPEWF-GYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYL 149
T + + + S L + F G + L +LDL +L+ SF L +L +L
Sbjct: 220 ANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFL 279
Query: 150 SGNSLAGNVPATLGELKKLSNLDLSRNL---------LTGEIPNAISLLGNLTRLNLASN 200
N++ +L L + L+L R+ L + L L LN+ N
Sbjct: 280 EYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDN 339
Query: 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG----NLDKLIELDLSKNSISGSLPL 256
G + L ++++L+LS++ + + L L+L+KN IS
Sbjct: 340 DIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESD 399
Query: 257 ELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFL 316
L +L L + N + +L+ + L+ + + LS NK + L P+L+ L
Sbjct: 400 AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRL 459
Query: 317 DLSRNNITGSWPILSTNGNASG-AVFNISNNMLYGDLNSSSFRKFS---LIDLSSNYFQ 371
L R + S + ++SNN + +N ++DL N
Sbjct: 460 MLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIAN-INDDMLEGLEKLEILDLQHNNLA 517
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 2e-44
Identities = 62/309 (20%), Positives = 110/309 (35%), Gaps = 26/309 (8%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWF--GYRLPALQVLDLRSCSLSGSIPGSFGNL--S 142
+ L + + L S+ E +++ L L + LS + +F L +
Sbjct: 189 GCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWT 248
Query: 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFF 202
L +L LS N+L + L +L L N + +++ L N+ LNL +F
Sbjct: 249 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFT 308
Query: 203 TGQI---------PSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG- 252
I L ++ LN+ DN + G + L L L LS + S
Sbjct: 309 KQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLR 368
Query: 253 ---SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFL 309
+ L L +++N + + F L L+V+DL N++ L +
Sbjct: 369 TLTNETFVSLAHSPLHILNLTKNKISK-IESDAFSWLGHLEVLDLGLNEIGQELTGQEWR 427
Query: 310 R-PNLRFLDLSRNNITGSWP-ILSTNGNASGAVFNISNNMLYG-DLNSSSFRKFS---LI 363
N+ + LS N + + + L D + S F+ ++
Sbjct: 428 GLENIFEIYLSYNKYLQLTRNSFALVPSLQ--RLMLRRVALKNVDSSPSPFQPLRNLTIL 485
Query: 364 DLSSNYFQG 372
DLS+N
Sbjct: 486 DLSNNNIAN 494
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 4e-33
Identities = 53/244 (21%), Positives = 82/244 (33%), Gaps = 29/244 (11%)
Query: 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFF 202
V S L VP L ++ L+L+ N L + LT L++ N
Sbjct: 5 SHEVADCSHLKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI 61
Query: 203 TGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLR 262
+ P L ++ LNL N L+ L EL L NSI +
Sbjct: 62 SKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQK 121
Query: 263 NLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPN--LRFLDLSR 320
NL L +S NGL G L+ LQ + LS NK+ L + N L+ L+LS
Sbjct: 122 NLITLDLSHNGLSS-TKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSS 180
Query: 321 NNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRGR 380
N I S + + + L++ ++ +
Sbjct: 181 NQIKE-----------------FSPGCF------HAIGRLFGLFLNNVQLGPSLTEKLCL 217
Query: 381 NVSL 384
++
Sbjct: 218 ELAN 221
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 3e-47
Identities = 47/311 (15%), Positives = 106/311 (34%), Gaps = 29/311 (9%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVL 147
+ + N+ + + L L +++ +C +P L + ++
Sbjct: 220 AENICEAWENENSEYAQQYKTEDLKWD-NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLI 278
Query: 148 YLSGNSL--------AGNVPATLGELKKLSNLDLSRN-LLTGEIPNAISLLGNLTRLNLA 198
++ N A +K+ + + N L T + ++ + L L
Sbjct: 279 NVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECL 338
Query: 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP--L 256
N G++P+ S + LNL+ N +T + G +++ L + N + +P
Sbjct: 339 YNQLEGKLPA-FGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIF 396
Query: 257 ELRGLRNLAKLVISENGLEGQLSEGLFP------TLDQLQVVDLSGNKLDGALPATLFLR 310
+ + + ++ + S N + + P + ++LS N++
Sbjct: 397 DAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTG 456
Query: 311 PNLRFLDLSRNNITGSWPILSTNGNASGA------VFNISNNMLYG---DLNSSSFRKFS 361
L ++L N +T + N + ++ N L D +++
Sbjct: 457 SPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLV 516
Query: 362 LIDLSSNYFQG 372
IDLS N F
Sbjct: 517 GIDLSYNSFSK 527
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 2e-43
Identities = 53/313 (16%), Positives = 102/313 (32%), Gaps = 37/313 (11%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
++ LT L F A + + + + NL L
Sbjct: 200 KAVMRLTKLRQFYMGNSPFVAENI------CEAWENENSEYAQQYKTEDLKWDNLKDLTD 253
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLT--------GEIPNAISLLGNLTRLNLA 198
+ + +P L L ++ ++++ N + + + + +
Sbjct: 254 VEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIG 313
Query: 199 SN-FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLE 257
N T + + L + + L N L G +P G+ KL L+L+ N I+ +P
Sbjct: 314 YNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITE-IPAN 371
Query: 258 LRG-LRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG-------ALPATLFL 309
G + L + N L+ + ++ + +D S N++ L T F
Sbjct: 372 FCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFK 431
Query: 310 RPNLRFLDLSRNNITGSWPILSTNGNASG-AVFNISNNML------YGDLNSSSFRKFS- 361
N+ ++LS N I+ S + N+ NML + +F+
Sbjct: 432 GINVSSINLSNNQISKF--PKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYL 489
Query: 362 --LIDLSSNYFQG 372
IDL N
Sbjct: 490 LTSIDLRFNKLTK 502
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 2e-41
Identities = 51/262 (19%), Positives = 85/262 (32%), Gaps = 28/262 (10%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
SL + L L G +P FG L L+L ++ G ++
Sbjct: 324 TSLQKMKKLGMLECLYNQLEGKLPA-FG-SEIKLASLNLAYNQITEIPANFCGFTEQVEN 381
Query: 147 LYLSGNSLAGNVPATL--GELKKLSNLDLSRNLLTG-------EIPNAISLLGNLTRLNL 197
L + N L +P + +S +D S N + + N++ +NL
Sbjct: 382 LSFAHNKL-KYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINL 440
Query: 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGF-------IPSEVGNLDKLIELDLSKNSI 250
++N + + S + +NL N LT N L +DL N +
Sbjct: 441 SNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKL 500
Query: 251 SGSLPLELR--GLRNLAKLVISENGLEGQLSEGLF-----PTLDQLQVVDLSGNKLDGAL 303
+ L + R L L + +S N D GN+
Sbjct: 501 T-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREW 558
Query: 304 PATLFLRPNLRFLDLSRNNITG 325
P + L P+L L + N+I
Sbjct: 559 PEGITLCPSLTQLQIGSNDIRK 580
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 154 bits (390), Expect = 1e-39
Identities = 40/258 (15%), Positives = 83/258 (32%), Gaps = 28/258 (10%)
Query: 89 LGNLTLLSSFNASGLSLPGSIPEWFG-YRLPALQVLDLRSCSLSG-------SIPGSFGN 140
G + + + + L IP F + + +D + + +
Sbjct: 373 CGFTEQVENLSFAHNKL-KYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFK 431
Query: 141 LSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG-------EIPNAISLLGNLT 193
++ + LS N ++ LS+++L N+LT + LT
Sbjct: 432 GINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLT 491
Query: 194 RLNLASNFFTGQIPS-GLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIEL------DLS 246
++L N T +L + ++LS N+ + P++ N L D
Sbjct: 492 SIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQ 550
Query: 247 KNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPAT 306
N P + +L +L I N + ++E + P + V+D+ N +
Sbjct: 551 GNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNEKITP---NISVLDIKDNPNISIDLSY 606
Query: 307 LFLRPNLRFLDLSRNNIT 324
+ L +
Sbjct: 607 VCPYIEAGMYMLFYDKTQ 624
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 5e-39
Identities = 44/288 (15%), Positives = 91/288 (31%), Gaps = 38/288 (13%)
Query: 120 LQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGN----VPATLGELKKLSNLDLSR 175
+ L L SG +P + G L+ L VL L + N P + R
Sbjct: 83 VTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMR 142
Query: 176 NLLTGEIPNAISLLG--NLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSE 233
+ +L + + S+ I + N +T +
Sbjct: 143 MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKA 201
Query: 234 VGNLDKLIELDLSKNSISG-------------------SLPLELRGLRNLAKLVISENGL 274
V L KL + + + + L+ L++L + +
Sbjct: 202 VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261
Query: 275 EGQLSEGLFPTLDQLQVVDLSGNKL--------DGALPATLFLRPNLRFLDLSRNNITGS 326
+L L L ++Q+++++ N+ D A + ++ + + NN+
Sbjct: 262 LTKLPTFLK-ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTF 320
Query: 327 WPILSTNGNASG-AVFNISNNMLYGDLNS-SSFRKFSLIDLSSNYFQG 372
P+ ++ + N L G L + S K + ++L+ N
Sbjct: 321 -PVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQITE 367
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 7e-39
Identities = 48/351 (13%), Positives = 117/351 (33%), Gaps = 39/351 (11%)
Query: 43 DWPLRTEPCR--SWRGVQC-QNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLS--- 96
+W E + GV NG+V +++ GF + GR+ ++G LT L
Sbjct: 59 NWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGAS--GRVPD-----AIGQLTELEVLA 111
Query: 97 -SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFG--NLSRLNVLYLSGNS 153
+ ++ P+ + + + + S L ++ +
Sbjct: 112 LGSHGEKVNERLFGPKGIS-ANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDP 170
Query: 154 LAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSL 213
++ + K + + N +T + A+ L L + + ++ F + +
Sbjct: 171 QQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWEN 229
Query: 214 SSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENG 273
+ ++ + NL L ++++ LP L+ L + + ++ N
Sbjct: 230 ENSEYAQQYKT-----EDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284
Query: 274 LEGQLSEGL-------FPTLDQLQVVDLSGNKL-DGALPATLFLRPNLRFLDLSRNNITG 325
P +++Q++ + N L + +L L L+ N + G
Sbjct: 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEG 344
Query: 326 SWPILSTNGNASG-AVFNISNNMLYGDLNSSSFRKFS---LIDLSSNYFQG 372
P G+ A N++ N + ++ ++ + + N +
Sbjct: 345 KLPAF---GSEIKLASLNLAYNQI-TEIPANFCGFTEQVENLSFAHNKLKY 391
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 3e-32
Identities = 42/283 (14%), Positives = 87/283 (30%), Gaps = 36/283 (12%)
Query: 126 RSCSLSGSIPG-SFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG---- 180
+ + G+ PG S + R+ L L G +G VP +G+L +L L L +
Sbjct: 64 KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERL 123
Query: 181 EIPNAISLLGNLTRLNLASNFFTGQIPSGL--YSLSSIQFLNLSDNALTGFIPSEVGNLD 238
P IS + + + S + ++ + I
Sbjct: 124 FGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183
Query: 239 KLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLD----------- 287
K ++ N+I+ + + L L + + + + + +
Sbjct: 184 KDTQIGQLSNNIT-FVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTED 242
Query: 288 -------QLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG------SWPILSTNG 334
L V++ LP L P ++ ++++ N W L+
Sbjct: 243 LKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAP 302
Query: 335 NASG-AVFNISNNMLYGDLNSSSFRKFS---LIDLSSNYFQGT 373
+ I N L +S +K +++ N +G
Sbjct: 303 VGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGK 345
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 2e-21
Identities = 22/213 (10%), Positives = 66/213 (30%), Gaps = 16/213 (7%)
Query: 170 NLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTG- 228
N + ++ + +++ G +T L+L +G++P + L+ ++ L L +
Sbjct: 61 NFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVN 120
Query: 229 ---FIPSEVGNLDKLIELDLSKNSISGSLP--LELRGLRNLAKLVISENGLEGQLSEGLF 283
F P + + + + +L K I+ + + + +
Sbjct: 121 ERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSR 180
Query: 284 PTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNI 343
TL + + N + + + LR + + + N
Sbjct: 181 ITL-KDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAE--NICEAWENE----NS 232
Query: 344 SNNMLYGDLNSS--SFRKFSLIDLSSNYFQGTV 374
Y + + + + +++ + +
Sbjct: 233 EYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 9e-10
Identities = 17/178 (9%), Positives = 43/178 (24%), Gaps = 11/178 (6%)
Query: 220 NLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLS 279
N + + + ++ L L SG +P + L L L + +G +
Sbjct: 63 NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNER 122
Query: 280 EGLFPTLDQ---LQVVDLSGNKLDGALPATLFLR--PNLRFLDLSRNNITGSWPILSTNG 334
+ + +L ++ + S S
Sbjct: 123 LFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRI- 181
Query: 335 NASGAVFNISNNMLYGDLNSSSFRKFS---LIDLSSNYFQGTVADDRGRNVSLGRNCL 389
+N + S + + + + ++ F + N +
Sbjct: 182 TLKDTQIGQLSNNITF--VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQ 237
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 165 bits (420), Expect = 5e-46
Identities = 60/175 (34%), Positives = 83/175 (47%), Gaps = 11/175 (6%)
Query: 485 STPPPKDPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKV 544
+V L AT NF LI G G ++KG L G V +K+
Sbjct: 12 INDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRR 71
Query: 545 SLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRV 602
+ S +E + E++ S H LV L+G C E E +L+YKYM G+L L+
Sbjct: 72 TPESSQGIEE-FETEIETLSFCRHPHLVSLIGFCDERN-EMILIYKYMENGNLKRHLYG- 128
Query: 603 TDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657
D S+ W RL+I IGAA GL YLH ++HRDV++ +ILLD+ F
Sbjct: 129 ---SDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFV 177
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 8e-45
Identities = 67/295 (22%), Positives = 111/295 (37%), Gaps = 22/295 (7%)
Query: 86 VDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLD----------------LRSCS 129
+D LT +SSF+ +++ + + L++++ L S
Sbjct: 275 IDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTS 334
Query: 130 LSGSIPGSFGNLSRLNVLYLSGNSLA--GNVPATLGELKKLSNLDLSRNLLTGEIPNAIS 187
G S +L L L LS N L+ G + L LDLS N + + +
Sbjct: 335 NKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFL 393
Query: 188 LLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLS 246
L L L+ + SL ++ +L++S L L L ++
Sbjct: 394 GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMA 453
Query: 247 KNSISGSLPLE-LRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPA 305
NS + + LRNL L +S+ LE LS F +L LQV+++S N
Sbjct: 454 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQ-LSPTAFNSLSSLQVLNMSHNNFFSLDTF 512
Query: 306 TLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKF 360
+L+ LD S N+I S + +S A N++ N SF ++
Sbjct: 513 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQW 567
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 3e-44
Identities = 64/303 (21%), Positives = 103/303 (33%), Gaps = 26/303 (8%)
Query: 86 VDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLN 145
V+ + N+T + +P ++P + + LDL L SF + L
Sbjct: 4 VEVVPNITYQCMEL-NFYKIPDNLP-------FSTKNLDLSFNPLRHLGSYSFFSFPELQ 55
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
VL LS + L LS L L+ N + A S L +L +L
Sbjct: 56 VLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASL 115
Query: 206 IPSGLYSLSSIQFLNLSDNALTGF-IPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNL 264
+ L +++ LN++ N + F +P NL L LDLS N I +LR L +
Sbjct: 116 ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
Query: 265 ----AKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLS 319
L +S N + + G F + +L + L N + T L L
Sbjct: 176 PLLNLSLDLSLNPMNF-IQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLV 233
Query: 320 RNNITGSWPILSTNGNA-------SGAVFNISNNMLYGDLNSSSFRKF---SLIDLSSNY 369
+ + +A + F ++ Y D F S L S
Sbjct: 234 LGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVT 293
Query: 370 FQG 372
+
Sbjct: 294 IER 296
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 4e-44
Identities = 56/255 (21%), Positives = 93/255 (36%), Gaps = 9/255 (3%)
Query: 79 RLNPRFAVDSLGNLTLLS-SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGS 137
+ F+ L +L L S N GLS G + +L+ LDL + + +
Sbjct: 336 KGGNAFSEVDLPSLEFLDLSRN--GLSFKGCCSQSDF-GTTSLKYLDLSFNGVIT-MSSN 391
Query: 138 FGNLSRLNVLYLSGNSLAGNVPA-TLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196
F L +L L ++L L+ L LD+S + L +L L
Sbjct: 392 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451
Query: 197 LASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255
+A N F L ++ FL+LS L P+ +L L L++S N+
Sbjct: 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 511
Query: 256 LELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR--PNL 313
+ L +L L S N + + L L ++L+ N FL+ +
Sbjct: 512 FPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQ 571
Query: 314 RFLDLSRNNITGSWP 328
R L + + + P
Sbjct: 572 RQLLVEVERMECATP 586
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 5e-33
Identities = 61/348 (17%), Positives = 100/348 (28%), Gaps = 68/348 (19%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSL-SGSIPGSFGNLSRLN 145
+ L+ L A +L G L L+ L++ + S +P F NL+ L
Sbjct: 94 GAFSGLSSLQKLVAVETNLASLENFPIG-HLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 152
Query: 146 VLYLSGNSLAGNVPATLGELKKLSN----LDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201
L LS N + L L ++ LDLS N + P A + L +L L +NF
Sbjct: 153 HLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNF 211
Query: 202 FTGQIPSG-------------------------------LYSLSSIQFLNLSDNALTGF- 229
+ + L L ++ L +
Sbjct: 212 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYL 271
Query: 230 --IPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGL----- 282
I L + L +I L + + L
Sbjct: 272 DDIIDLFNCLTNVSSFSLVSVTIERVKDFS--YNFGWQHLELVNCKFGQFPTLKLKSLKR 329
Query: 283 -------------FPTLDQLQVVDLSGNKLD--GALPATLFLRPNLRFLDLSRNNITGSW 327
L L+ +DLS N L G + F +L++LDLS N +
Sbjct: 330 LTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMS 389
Query: 328 PILSTNGNASGAVFNISNNMLYGDLNSSSFRKFS---LIDLSSNYFQG 372
+ ++ L S F +D+S + +
Sbjct: 390 SNFLGLEQLE--HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 3e-30
Identities = 56/306 (18%), Positives = 92/306 (30%), Gaps = 29/306 (9%)
Query: 87 DSLGNLTLLSSFNA----SGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP-GSFGNL 141
L L + N S + P F + L L LR+ S ++ L
Sbjct: 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF--KEIRLHKLTLRNNFDSLNVMKTCIQGL 224
Query: 142 SRLNVLYLSGNSLAGN---VPATLGELKKLSNLDLSRNLLT------GEIPNAISLLGNL 192
+ L V L L+ L NL + L +I + + L N+
Sbjct: 225 AGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNV 284
Query: 193 TRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252
+ +L S Q L L + F L L L + N
Sbjct: 285 SSFSLVSVTIERVKDFSY--NFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGN 339
Query: 253 SLPLELRGLRNLAKLVISENGLEGQ-LSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRP 311
+ L +L L +S NGL + L+ +DLS N + + +
Sbjct: 340 AFSEV--DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLE 396
Query: 312 NLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFS---LIDLSSN 368
L LD +N+ + +IS+ + F S ++ ++ N
Sbjct: 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV-AFNGIFNGLSSLEVLKMAGN 455
Query: 369 YFQGTV 374
FQ
Sbjct: 456 SFQENF 461
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 2e-24
Identities = 37/163 (22%), Positives = 58/163 (35%), Gaps = 4/163 (2%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
L+ L +G S + L L LDL C L P +F +LS L V
Sbjct: 439 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAI-SLLGNLTRLNLASNFFTGQ 205
L +S N+ L L LD S N + + +L LNL N F
Sbjct: 499 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 558
Query: 206 IPSG--LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLS 246
L + + L + + PS+ + ++ L+++
Sbjct: 559 CEHQSFLQWIKDQRQLLVEVERMECATPSDKQGM-PVLSLNIT 600
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 1e-20
Identities = 43/187 (22%), Positives = 70/187 (37%), Gaps = 27/187 (14%)
Query: 191 NLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250
N+T + NF+ +IP L S + L+LS N L + +L LDLS+ I
Sbjct: 9 NITYQCMELNFY--KIPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEI 64
Query: 251 SGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310
+ L +L+ L+++ N ++ L+ G F L LQ + L +
Sbjct: 65 QTIEDGAYQSLSHLSTLILTGNPIQS-LALGAFSGLSSLQKLVAVETNLASLENFPIGHL 123
Query: 311 PNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYF 370
L+ L+++ N I F + S+ +DLSSN
Sbjct: 124 KTLKELNVAHNLIQS---------------FKLPEYF-------SNLTNLEHLDLSSNKI 161
Query: 371 QGTVADD 377
Q D
Sbjct: 162 QSIYCTD 168
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 159 bits (403), Expect = 2e-41
Identities = 65/303 (21%), Positives = 118/303 (38%), Gaps = 13/303 (4%)
Query: 81 NPRFAVDSLGNLTL--LSSFNASGLSLPGSIPEWF-GYRLPALQVLDLRSCSLSGSIPGS 137
N L N T+ L + P F G +++ ++L+ +
Sbjct: 214 NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNT 273
Query: 138 FGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197
F S L L L+ L+ +P+ L L L L LS N + S +LT L++
Sbjct: 274 FHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSI 332
Query: 198 ASNFFTGQIPSG-LYSLSSIQFLNLSDNALT--GFIPSEVGNLDKLIELDLSKNSISGSL 254
N ++ +G L +L +++ L+LS + + ++ NL L L+LS N
Sbjct: 333 KGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLK 392
Query: 255 PLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLR 314
+ L L ++ L+ + ++ F L L+V++LS + LD + P L+
Sbjct: 393 TEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQ 452
Query: 315 FLDLSRNNITGSWPILSTNGNASGA--VFNISNNMLYGDLNSSSFRKFS---LIDLSSNY 369
L+L N+ + + G + +S L ++ +F +DLS N
Sbjct: 453 HLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS-IDQHAFTSLKMMNHVDLSHNR 511
Query: 370 FQG 372
Sbjct: 512 LTS 514
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 2e-39
Identities = 55/246 (22%), Positives = 88/246 (35%), Gaps = 8/246 (3%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSL--SGSIPGSFGNLSRL 144
S N L+ + G + + L L+ LDL + S NLS L
Sbjct: 319 ISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHL 378
Query: 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG-EIPNAISLLGNLTRLNLASNFFT 203
L LS N E +L LDL+ L + + L L LNL+ +
Sbjct: 379 QSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLD 438
Query: 204 GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG---NLDKLIELDLSKNSISGSLPLELRG 260
L ++Q LNL N + L +L L LS +S
Sbjct: 439 ISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTS 498
Query: 261 LRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSR 320
L+ + + +S N L S L + ++L+ N + LP+ L + R ++L +
Sbjct: 499 LKMMNHVDLSHNRLTS-SSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQ 556
Query: 321 NNITGS 326
N + +
Sbjct: 557 NPLDCT 562
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 5e-39
Identities = 49/275 (17%), Positives = 97/275 (35%), Gaps = 16/275 (5%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+PG++P + L+ L +F L L L L+ + T
Sbjct: 26 EIPGTLPNS-------TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQ 78
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD 223
+L L L+ N L A+S L L + L++ +++ L L
Sbjct: 79 SQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGS 138
Query: 224 NALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE-GQLSEGL 282
N ++ + +KL LD N+I ++ L+ L ++ NG + + G
Sbjct: 139 NHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGA 198
Query: 283 FPTLDQLQVVDLSGNKLDGALPATLFLR--PNLRFLDLSRNNITG-SWPILSTNGNASGA 339
F + Q ++ G + + L +L + S + S
Sbjct: 199 FDSA-VFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVE 257
Query: 340 VFNISNNMLYGDLNSSSFRKFS---LIDLSSNYFQ 371
N+ + + ++S++F FS +DL++ +
Sbjct: 258 SINLQKHYFFN-ISSNTFHCFSGLQELDLTATHLS 291
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 1e-35
Identities = 56/249 (22%), Positives = 91/249 (36%), Gaps = 14/249 (5%)
Query: 82 PRFAVDSLGNLTLLS-SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGN 140
+++L NL L S + + L LQ L+L +F
Sbjct: 342 GTGCLENLENLRELDLSHDD--IETSDCCNLQL-RNLSHLQSLNLSYNEPLSLKTEAFKE 398
Query: 141 LSRLNVLYLSGNSLAGNVP-ATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199
+L +L L+ L + L L L+LS +LL L L LNL
Sbjct: 399 CPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQG 458
Query: 200 NFFTG---QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPL 256
N F Q + L +L ++ L LS L+ +L + +DLS N ++ S
Sbjct: 459 NHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIE 518
Query: 257 ELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFL 316
L L+ + L ++ N + + L P L Q + ++L N LD T L +
Sbjct: 519 ALSHLKGI-YLNLASNHISI-ILPSLLPILSQQRTINLRQNPLDC----TCSNIYFLEWY 572
Query: 317 DLSRNNITG 325
+ +
Sbjct: 573 KENMQKLED 581
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 5e-21
Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 8/160 (5%)
Query: 72 FKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLS 131
TR+ + + +L L +L N S L S + F LPALQ L+L+
Sbjct: 407 LAFTRLKVKDAQSPFQNLHLLKVL---NLSHSLLDISSEQLFDG-LPALQHLNLQGNHFP 462
Query: 132 GSI---PGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISL 188
S L RL +L LS L+ LK ++++DLS N LT A+S
Sbjct: 463 KGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSH 522
Query: 189 LGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTG 228
L + LNLASN + +PS L LS + +NL N L
Sbjct: 523 LKGIY-LNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 4e-40
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 23/173 (13%)
Query: 501 SFTYEQLLRATGNFSE------TNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF----- 549
SF++ +L T NF E N + +G G ++KG + TTV VKK++
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 72
Query: 550 -KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDD 608
K++ + E+ + ++ H LV LLG + + LVY YM G L L + D
Sbjct: 73 LKQQ-FDQEIKVMAKCQHENLVELLGFSSD-GDDLCLVYVYMPNGSLLDRLSCL-----D 125
Query: 609 SLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
L W R KIA GAA G+++LH + +HRD+++++ILLD+ F ++
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKIS 175
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 154 bits (390), Expect = 4e-39
Identities = 49/314 (15%), Positives = 92/314 (29%), Gaps = 41/314 (13%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
++ LT L + + + + S+ NL L
Sbjct: 442 KAIQRLTKLQIIYFANSPFTYDNIAVD------WEDANSDYAKQYENEELSWSNLKDLTD 495
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG---------EIPNAISLLGNLTRLNL 197
+ L +P L +L +L +L+++ N + + + +
Sbjct: 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYM 555
Query: 198 ASNFFTG-QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPL 256
N + L + + L+ N + G KL +L L N I +P
Sbjct: 556 GYNNLEEFPASASLQKMVKLGLLDCVHNKVR--HLEAFGTNVKLTDLKLDYNQIE-EIPE 612
Query: 257 EL-RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRP---- 311
+ + L S N L+ + ++ + VD S NK+ +
Sbjct: 613 DFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGS-EGRNISCSMDDYK 671
Query: 312 --NLRFLDLSRNNITGSWPILSTNGNASG-AVFNISNNMLYGDLNSSSFRKFSL------ 362
N + LS N I S + +SNN++ + +S +
Sbjct: 672 GINASTVTLSYNEIQKF--PTELFATGSPISTIILSNNLM-TSIPENSLKPKDGNYKNTY 728
Query: 363 ----IDLSSNYFQG 372
IDL N
Sbjct: 729 LLTTIDLRFNKLTS 742
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 1e-35
Identities = 53/307 (17%), Positives = 99/307 (32%), Gaps = 33/307 (10%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVL 147
SL + L + + + + L L L + ++ L
Sbjct: 568 SLQKMVKLGLLDCVHNKV-RHLEAFGT--NVKLTDLKLDYNQIEEIPEDFCAFTDQVEGL 624
Query: 148 YLSGNSLAGNVPAT-LGELKKLSNLDLSRNLLTGEIPNAISLLG-----NLTRLNLASNF 201
S N L + + ++D S N + E N + N + + L+ N
Sbjct: 625 GFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNE 684
Query: 202 FTGQIPSGLYSLSSIQFLNLSDNALT-------GFIPSEVGNLDKLIELDLSKNSISGSL 254
+ S I + LS+N +T N L +DL N ++ SL
Sbjct: 685 IQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SL 743
Query: 255 PLELR--GLRNLAKLVISENGLE------GQLSEGLFPTLDQLQVVDLSGNKLDGALPAT 306
+ R L L+ + +S N S+ D GN++ P
Sbjct: 744 SDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQ--LKAFGIRHQRDAEGNRILRQWPTG 801
Query: 307 LFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNN-MLYGDLNSS-SFRKFSLID 364
+ P+L L + N+I L+ + +I++N + D+ S + + +
Sbjct: 802 ITTCPSLIQLQIGSNDIRKVDEKLTPQLY----ILDIADNPNISIDVTSVCPYIEAGMYV 857
Query: 365 LSSNYFQ 371
L + Q
Sbjct: 858 LLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 4e-31
Identities = 40/289 (13%), Positives = 88/289 (30%), Gaps = 40/289 (13%)
Query: 120 LQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLT 179
+ L L G +P + G L+ L VL +S + E + ++ +
Sbjct: 325 VTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIR 384
Query: 180 GEIPN-AISLLGNLTRLNLASNFFT-----GQIPSGLYSLSSIQFLNLSDNALTGFIPSE 233
+ L +L + I + N +T I
Sbjct: 385 MHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKA 443
Query: 234 VGNLDKLIELDLSKNSISG-------------------SLPLELRGLRNLAKLVISENGL 274
+ L KL + + + + + L L++L + +
Sbjct: 444 IQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPN 503
Query: 275 EGQLSEGLFPTLDQLQVVDLSGNKLDG---------ALPATLFLRPNLRFLDLSRNNITG 325
QL + L+ L +LQ ++++ N+ L P ++ + NN+
Sbjct: 504 MTQLPDFLYD-LPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEE 562
Query: 326 SWPILSTNGNASG-AVFNISNNMLYGDLNS-SSFRKFSLIDLSSNYFQG 372
P ++ + + +N + L + + K + + L N +
Sbjct: 563 F-PASASLQKMVKLGLLDCVHNKV-RHLEAFGTNVKLTDLKLDYNQIEE 609
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 114 bits (286), Expect = 2e-26
Identities = 34/225 (15%), Positives = 63/225 (28%), Gaps = 34/225 (15%)
Query: 84 FAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLS-------GSIPG 136
S+ S + E F + + L + ++ G
Sbjct: 664 SCSMDDYKGINASTVTLSYNEIQKFPTELFA-TGSPISTIILSNNLMTSIPENSLKPKDG 722
Query: 137 SFGNLSRLNVLYLSGNSLAGNVPATL--GELKKLSNLDLSRNLLTGEIPNAISLLGNLTR 194
++ N L + L N L + L LSN+D+S N + P L
Sbjct: 723 NYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFS-SFPTQPLNSSQLKA 780
Query: 195 LNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSL 254
+ + N + P+ + LI+L + N I +
Sbjct: 781 FGIRHQ------------------RDAEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KV 821
Query: 255 PLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL 299
+L L L I++N + + + L +K
Sbjct: 822 DEKL--TPQLYILDIADNPNI-SIDVTSVCPYIEAGMYVLLYDKT 863
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 95.3 bits (237), Expect = 2e-20
Identities = 29/190 (15%), Positives = 60/190 (31%), Gaps = 21/190 (11%)
Query: 87 DSLGNLTLLSSFNASG---LSLP----GSIPEWFGYRLPALQVLDLRSCSLSGSIPGS-- 137
+ + +S+ S S+P + L +DLR L+ S+
Sbjct: 691 ELFATGSPISTIILSNNLMTSIPENSLKPKDGNYK-NTYLLTTIDLRFNKLT-SLSDDFR 748
Query: 138 FGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL------LTGEIPNAISLLGN 191
L L+ + +S N + P +L + + + P I+ +
Sbjct: 749 ATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPS 807
Query: 192 LTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSIS 251
L +L + SN + L + L+++DN + V + L +
Sbjct: 808 LIQLQIGSNDIRK-VDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864
Query: 252 GSLPLELRGL 261
+ G+
Sbjct: 865 DIRGCDALGI 874
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 80.3 bits (198), Expect = 1e-15
Identities = 26/159 (16%), Positives = 51/159 (32%), Gaps = 10/159 (6%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
+ N LL++ + L ++ LP L +D+ S S P N S+L
Sbjct: 722 GNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFS-SFPTQPLNSSQLKA 780
Query: 147 LYL------SGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200
+ GN + P + L L + N + ++ L L L++A N
Sbjct: 781 FGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KVDE--KLTPQLYILDIADN 837
Query: 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDK 239
+ + L + + +++
Sbjct: 838 PNISIDVTSVCPYIEAGMYVLLYDKTQDIRGCDALGIER 876
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 2e-14
Identities = 31/265 (11%), Positives = 73/265 (27%), Gaps = 42/265 (15%)
Query: 169 SNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTG 228
LD N N N + + Q L + + L+L+ G
Sbjct: 279 EALDGKNWRYYSGTINNTIHSLNWN-FNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKG 337
Query: 229 FIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQ 288
+P +G L +L L +S + S L ++ + + +
Sbjct: 338 RVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQR 397
Query: 289 LQVVDLSGNKLDG----------------------------ALPATLFLRPNLRFLDLSR 320
L + DL + ++ + + L+ + +
Sbjct: 398 LNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFAN 457
Query: 321 NNITGSWPILSTNGNASGAVFNISNNMLYGDLNSS--SFRKFSLIDLSSNYFQGTVADDR 378
+ T + N Y + S + + + ++L + + D
Sbjct: 458 SPFTYDNIAVDWE------DANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFL 511
Query: 379 G-----RNVSLGRNCLQSVASQRSS 398
+++++ N S A ++
Sbjct: 512 YDLPELQSLNIACNRGISAAQLKAD 536
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 6e-38
Identities = 59/310 (19%), Positives = 107/310 (34%), Gaps = 27/310 (8%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+P IP + +DL L SF N S L L LS +
Sbjct: 25 KVPDDIPSS-------TKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWH 77
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD 223
L LSNL L+ N + P + S L +L L + L +++ LN++
Sbjct: 78 GLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAH 137
Query: 224 NALTGF-IPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLA----KLVISENGLEGQL 278
N + +P+ NL L+ +DLS N I +L+ LR L +S N ++ +
Sbjct: 138 NFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPID-FI 196
Query: 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNITGSWPILSTNGNAS 337
+ F + +L + L GN + T L L + +
Sbjct: 197 QDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIM 255
Query: 338 GAVFNISNNMLYGDLN------SSSFRKFS---LIDLSSN---YFQGTVADDRGRNVSLG 385
+ +++ + F + + L+ Y + + +++S+
Sbjct: 256 EGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSII 315
Query: 386 RNCLQSVASQ 395
R L+ +
Sbjct: 316 RCQLKQFPTL 325
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 5e-31
Identities = 54/300 (18%), Positives = 99/300 (33%), Gaps = 18/300 (6%)
Query: 82 PRFAVDSLGNLTLLSSFNASGLSLP--GSIPEWFGYRLPALQV--LDLRSCSLSGSIPGS 137
+ + +L L + L + + L +
Sbjct: 221 MKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK 280
Query: 138 FGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197
F L+ ++ + L+G S+ + + K +L + R L + P L L L L
Sbjct: 281 FHCLANVSAMSLAGVSI--KYLEDVPKHFKWQSLSIIRCQLK-QFPTL--DLPFLKSLTL 335
Query: 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPS--EVGNLDKLIELDLSKNSISGSLP 255
N G I +L S+ +L+LS NAL+ + L LDLS N +
Sbjct: 336 TMN--KGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMS 392
Query: 256 LELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRF 315
GL L L + L+ F +L++L +D+S +L
Sbjct: 393 ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNT 452
Query: 316 LDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFS---LIDLSSNYFQG 372
L ++ N+ + + ++S L ++ F L+++S N
Sbjct: 453 LKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQ-ISWGVFDTLHRLQLLNMSHNNLLF 511
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 1e-30
Identities = 46/248 (18%), Positives = 76/248 (30%), Gaps = 13/248 (5%)
Query: 132 GSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGN 191
GS+ + + L+ VP + N+DLS N L + S
Sbjct: 2 GSLNPCIEVVPNI-TYQCMDQKLS-KVPDDIPS--STKNIDLSFNPLKILKSYSFSNFSE 57
Query: 192 LTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSIS 251
L L+L+ + L + L L+ N + F P L L L + ++
Sbjct: 58 LQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLA 117
Query: 252 GSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL----DGALPATL 307
+ L L KL ++ N + F L L VDLS N + L
Sbjct: 118 SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLR 177
Query: 308 FLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFS---LID 364
LD+S N I + N ++ + + + +
Sbjct: 178 ENPQVNLSLDMSLNPIDFIQD--QAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHR 235
Query: 365 LSSNYFQG 372
L F+
Sbjct: 236 LILGEFKD 243
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 5e-28
Identities = 38/166 (22%), Positives = 58/166 (34%), Gaps = 1/166 (0%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
+ L L + +L L L LD+ + G F L+ LN
Sbjct: 393 ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNT 452
Query: 147 LYLSGNSLAGNVPA-TLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
L ++GNS N + L+ LDLS+ L L L LN++ N
Sbjct: 453 LKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFL 512
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSIS 251
S L S+ L+ S N + L +L+ NS++
Sbjct: 513 DSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 1e-27
Identities = 44/187 (23%), Positives = 68/187 (36%), Gaps = 4/187 (2%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP-GSFGNLSRLNV 146
S L + S + F L LQ LD + +L +F +L +L
Sbjct: 371 SDLGTNSLRHLDLSFNGA-IIMSANFMG-LEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIP-NAISLLGNLTRLNLASNFFTGQ 205
L +S + + L L+ L ++ N N + NLT L+L+
Sbjct: 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQI 488
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLA 265
+L +Q LN+S N L S L L LD S N I S + ++LA
Sbjct: 489 SWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLA 548
Query: 266 KLVISEN 272
++ N
Sbjct: 549 FFNLTNN 555
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 8e-22
Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 5/153 (3%)
Query: 76 RIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP 135
+ R+ A SL L L + S + F L +L L + S +
Sbjct: 410 TLKRVTEFSAFLSLEKLLYL---DISYTNTKIDFDGIFL-GLTSLNTLKMAGNSFKDNTL 465
Query: 136 -GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTR 194
F N + L L LS L L +L L++S N L + + L +L+
Sbjct: 466 SNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLST 525
Query: 195 LNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT 227
L+ + N + S+ F NL++N++
Sbjct: 526 LDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 2e-35
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 20/250 (8%)
Query: 87 DSLGNLTL--LSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRL 144
D L + T + + LP P+ RL LQ + + + L +P + + L
Sbjct: 73 DLLEDATQPGRVALELRSVPLP-QFPDQAF-RLSHLQHMTIDAAGLM-ELPDTMQQFAGL 129
Query: 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAI---------SLLGNLTRL 195
L L+ N L +PA++ L +L L + E+P + L NL L
Sbjct: 130 ETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSL 188
Query: 196 NLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255
L +P+ + +L +++ L + ++ L+ + + +L KL ELDL + + P
Sbjct: 189 RLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYP 246
Query: 256 LELRGLRNLAKLVISE-NGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLR 314
G L +L++ + + L L + L QL+ +DL G LP+ + P
Sbjct: 247 PIFGGRAPLKRLILKDCSNLL-TLPLDIH-RLTQLEKLDLRGCVNLSRLPSLIAQLPANC 304
Query: 315 FLDLSRNNIT 324
+ + +
Sbjct: 305 IILVPPHLQA 314
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 6e-33
Identities = 47/234 (20%), Positives = 83/234 (35%), Gaps = 15/234 (6%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
D L+ L L +P+ + L+ L L L ++P S +L+RL
Sbjct: 98 DQAFRLSHLQHMTIDAAGLM-ELPDTMQ-QFAGLETLTLARNPLR-ALPASIASLNRLRE 154
Query: 147 LYLSGNSLAGNVPATLG---------ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197
L + +P L L L +L L + +P +I+ L NL L +
Sbjct: 155 LSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKI 213
Query: 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLE 257
++ + + ++ L ++ L+L P G L L L S +LPL+
Sbjct: 214 RNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLD 272
Query: 258 LRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRP 311
+ L L KL + +L + L ++ + + RP
Sbjct: 273 IHRLTQLEKLDLRGCVNLSRLPSLI-AQLPANCIILVPPHLQAQLDQHRPVARP 325
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 4e-28
Identities = 35/224 (15%), Positives = 65/224 (29%), Gaps = 19/224 (8%)
Query: 111 EWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSN 170
+ + L + + R +
Sbjct: 5 HHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNNPQI 60
Query: 171 LDLSRNLLTGEIPNAISLL--GNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTG 228
+ L + + L L S Q P + LS +Q + + L
Sbjct: 61 ETRTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLME 118
Query: 229 FIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISE-NGLE------GQLSE- 280
+P + L L L++N + +LP + L L +L I L
Sbjct: 119 -LPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDAS 176
Query: 281 GLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
G L LQ + L + +LPA++ NL+ L + + ++
Sbjct: 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 2e-18
Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 2/129 (1%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
S+ NL L S L ++ LP L+ LDLR C+ + P FG + L
Sbjct: 200 ASIANLQNLKSLKIRNSPL-SALGPAIH-HLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQI 206
L L S +P + L +L LDL + +P+ I+ L + + +
Sbjct: 258 LILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLD 317
Query: 207 PSGLYSLSS 215
+ +
Sbjct: 318 QHRPVARPA 326
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 4e-34
Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 13/217 (5%)
Query: 108 SIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167
+I E ++ + SL ++ + + L LSGN L+ A L K
Sbjct: 1 AIHEIKQN-GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTK 59
Query: 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT 227
L L+LS N+L E + L L L+L +N+ L SI+ L+ ++N ++
Sbjct: 60 LELLNLSSNVLY-ETL-DLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS 112
Query: 228 GFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLD 287
+ G + L+ N I+ L+ + L + N ++ L + D
Sbjct: 113 -RVSCSRGQ--GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSD 169
Query: 288 QLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
L+ ++L N + + + L+ LDLS N +
Sbjct: 170 TLEHLNLQYNFIY-DVKGQVVF-AKLKTLDLSSNKLA 204
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-26
Identities = 38/210 (18%), Positives = 68/210 (32%), Gaps = 12/210 (5%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175
P+++ L + ++S + +YL+ N + G ++ LDL
Sbjct: 97 VGPSIETLHAANNNIS-RVS--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKL 153
Query: 176 NLLTG-EIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEV 234
N + + L LNL NF + + + ++ L+LS N L F+ E
Sbjct: 154 NEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQV-VFAKLKTLDLSSNKLA-FMGPEF 210
Query: 235 GNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDL 294
+ + + L N + + LR +NL + NG F ++Q V
Sbjct: 211 QSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269
Query: 295 SGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
K P L
Sbjct: 270 QTVKKLTGQNEEECTVPTL----GHYGAYC 295
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 129 bits (328), Expect = 4e-33
Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 20/263 (7%)
Query: 86 VDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLN 145
+ +L NLT L + ++ P L + L+L + + N++ LN
Sbjct: 103 ISALQNLTNLRELYLNEDNISDISP--LAN-LTKMYSLNLGANHNLSDLS-PLSNMTGLN 158
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
L ++ + + P + L L +L L+ N + P ++ L +L N T
Sbjct: 159 YLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDI 214
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLA 265
P + +++ + L + +N +T P + NL +L L++ N IS + ++ L L
Sbjct: 215 TP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQIS-DIN-AVKDLTKLK 268
Query: 266 KLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG 325
L + N + +S L QL + L+ N+L + NL L LS+N+IT
Sbjct: 269 MLNVGSNQISD-ISV--LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325
Query: 326 SWPILSTNGNASGAVFNISNNML 348
P+ + + +N ++
Sbjct: 326 IRPL---ASLSKMDSADFANQVI 345
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 7e-32
Identities = 57/240 (23%), Positives = 89/240 (37%), Gaps = 19/240 (7%)
Query: 86 VDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLN 145
+ L NLT + S N S + L L + + P NL+ L
Sbjct: 125 ISPLANLTKMYSLNLGANHN-LSDLSPLSN-MTGLNYLTVTESKVKDVTP--IANLTDLY 180
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
L L+ N + P L L L N +T P ++ + L L + +N T
Sbjct: 181 SLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD- 235
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLA 265
S L +LS + +L + N ++ + V +L KL L++ N IS L L L
Sbjct: 236 -LSPLANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISDISVLN--NLSQLN 290
Query: 266 KLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALP-ATLFLRPNLRFLDLSRNNIT 324
L ++ N L + L L + LS N + P A+L + D + I
Sbjct: 291 SLFLNNNQLGN-EDMEVIGGLTNLTTLFLSQNHITDIRPLASL---SKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 5e-27
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 120 LQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLT 179
L ++ P + +L+ L S+ T EL+ ++ L ++ +
Sbjct: 2 AATLATLPAPINQIFPDA--DLAEGIRAVLQKASVTD--VVTQEELESITKLVVAGEKVA 57
Query: 180 GEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDK 239
I I L NL LNL N T P L +L + L + N +T S + NL
Sbjct: 58 -SIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT--DISALQNLTN 111
Query: 240 LIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL 299
L EL L++++IS PL L + L + N LS + L + ++ +K+
Sbjct: 112 LRELYLNEDNISDISPLA--NLTKMYSLNLGANHNLSDLSP--LSNMTGLNYLTVTESKV 167
Query: 300 DGALPATLFLRPNLRFLDLSRNNITG 325
+ L +L L L+ N I
Sbjct: 168 KD-VTPIANL-TDLYSLSLNYNQIED 191
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 5e-33
Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 17/227 (7%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLA--GNVPAT 161
S+P IP L+L S L G F L++L L LS N L+ G +
Sbjct: 21 SVPTGIPSS-------ATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQS 73
Query: 162 LGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGL-YSLSSIQFLN 220
L LDLS N + + + L L L+ + + SL ++ +L+
Sbjct: 74 DFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 132
Query: 221 LSDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLE-LRGLRNLAKLVISENGLEGQL 278
+S + + L L L ++ NS + + LRNL L +S+ LE QL
Sbjct: 133 ISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QL 190
Query: 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNIT 324
S F +L LQV+++S N +L + +L+ LD S N+I
Sbjct: 191 SPTAFNSLSSLQVLNMSHNNF-FSLDTFPYKCLNSLQVLDYSLNHIM 236
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-26
Identities = 52/234 (22%), Positives = 86/234 (36%), Gaps = 12/234 (5%)
Query: 72 FKRTRIGRLNPRFAVDSLGNLTLLS-SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSL 130
+ ++ L D L LT LS S N GLS G + + +L+ LDL +
Sbjct: 35 LESNKLQSLPHG-VFDKLTQLTKLSLSSN--GLSFKGCCSQSD-FGTTSLKYLDLSFNGV 90
Query: 131 SGSIPGSFGNLSRLNVLYLSGNSLAGNVPA-TLGELKKLSNLDLSRNLLTGEIPNAISLL 189
++ +F L +L L ++L L+ L LD+S + L
Sbjct: 91 I-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 149
Query: 190 GNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSK 247
+L L +A N F L ++ FL+LS L + +L L L++S
Sbjct: 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSH 208
Query: 248 NSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLF-PTLDQLQVVDLSGNKLD 300
N+ + L +L L S N + + L ++L+ N
Sbjct: 209 NNFFSLDTFPYKCLNSLQVLDYSLNHIM-TSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 37/211 (17%), Positives = 64/211 (30%), Gaps = 37/211 (17%)
Query: 191 NLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250
+ T + S T +P+G+ SS L L N L L +L +L LS N +
Sbjct: 8 SGTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGL 64
Query: 251 SGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310
S L+ +DLS N + + +
Sbjct: 65 S-----------------------FKGCCSQSDFGTTSLKYLDLSFNGV-ITMSSNFLGL 100
Query: 311 PNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFS---LIDLSS 367
L LD +N+ + +IS+ + F S ++ ++
Sbjct: 101 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT-RVAFNGIFNGLSSLEVLKMAG 159
Query: 368 NYFQGTVADDRGRNVS------LGRNCLQSV 392
N FQ D + L + L+ +
Sbjct: 160 NSFQENFLPDIFTELRNLTFLDLSQCQLEQL 190
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 5e-33
Identities = 62/256 (24%), Positives = 94/256 (36%), Gaps = 28/256 (10%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175
L L L L + +S +F L +L LY+S N L +P L L L +
Sbjct: 76 GLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNL--PSSLVELRIHD 132
Query: 176 NLLTGEIPNAISLLGNLTRLNLASNFFT-GQIPSGLYSLSSIQFLNLSDNALTGFIPSEV 234
N + S L N+ + + N G + + +L +S+ LTG IP
Sbjct: 133 NRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG-IPK-- 189
Query: 235 GNLDKLIELDLSKNSISGSLPLE-LRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVD 293
+ L EL L N I ++ LE L L +L + N + + G L L+ +
Sbjct: 190 DLPETLNELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQIR-MIENGSLSFLPTLRELH 247
Query: 294 LSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLN 353
L NKL +PA L L+ + L NNIT + N
Sbjct: 248 LDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-----------------KVGVNDFCPVGF 289
Query: 354 SSSFRKFSLIDLSSNY 369
++ I L +N
Sbjct: 290 GVKRAYYNGISLFNNP 305
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 2e-19
Identities = 44/216 (20%), Positives = 67/216 (31%), Gaps = 40/216 (18%)
Query: 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNV--PATLGELKKLSNLDLS 174
+L L + + G F L +N + + GN L + P LK L+ L +S
Sbjct: 122 PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLK-LNYLRIS 180
Query: 175 RNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSE 233
LT IP L L L+L N I L S + L L N +
Sbjct: 181 EAKLT-GIPK--DLPETLNELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQIRMIENGS 236
Query: 234 VGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE------------------ 275
+ L L EL L N +S +P L L+ L + + N +
Sbjct: 237 LSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAY 295
Query: 276 -------------GQLSEGLFPTLDQLQVVDLSGNK 298
++ F + + K
Sbjct: 296 YNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 1e-32
Identities = 60/282 (21%), Positives = 106/282 (37%), Gaps = 15/282 (5%)
Query: 80 LNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFG 139
+D LT +SSF+ +++ + + L++++ +
Sbjct: 269 YYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFP------TL 322
Query: 140 NLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLT--GEIPNAISLLGNLTRLNL 197
L L L + N GN + + L L LDLSRN L+ G + +L L+L
Sbjct: 323 KLKSLKRLTFTSNKG-GNAFSEVD-LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDL 380
Query: 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPL 256
+ N + S L ++ L+ + L V +L LI LD+S +
Sbjct: 381 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG 439
Query: 257 ELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRF 315
GL +L L ++ N + +F L L +DLS +L+ L T F +L+
Sbjct: 440 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQV 498
Query: 316 LDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSF 357
L+++ N + S P + S + N +
Sbjct: 499 LNMASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 539
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 6e-32
Identities = 55/276 (19%), Positives = 105/276 (38%), Gaps = 14/276 (5%)
Query: 108 SIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167
+ + + P LQVLDL C + G++ +LS L+ L L+GN + L
Sbjct: 42 HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSS 101
Query: 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFT-GQIPSGLYSLSSIQFLNLSDNAL 226
L L L I L L LN+A N ++P +L++++ L+LS N +
Sbjct: 102 LQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
Query: 227 TGFIPSEVGNLDKL----IELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGL 282
+++ L ++ + LDLS N ++ P + + L KL + N + +
Sbjct: 162 QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTC 220
Query: 283 FPTLDQLQVVDLSGNKLDG-----ALPATLFLR---PNLRFLDLSRNNITGSWPILSTNG 334
L L+V L + + + L+ + I N
Sbjct: 221 IQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNC 280
Query: 335 NASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYF 370
+ + F++ + + + S + ++L + F
Sbjct: 281 LTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKF 316
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 3e-30
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 9/214 (4%)
Query: 117 LPALQVLDLRSCSLS--GSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLS 174
LP+L+ LDL LS G S + L L LS N + + + L++L +LD
Sbjct: 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQ 404
Query: 175 RNLLTGEIP-NAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSE 233
+ L + L NL L+++ LSS++ L ++ N+ +
Sbjct: 405 HSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPD 464
Query: 234 V-GNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVV 292
+ L L LDLS+ + P L +L L ++ N L+ + +G+F L LQ +
Sbjct: 465 IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK-SVPDGIFDRLTSLQKI 523
Query: 293 DLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS 326
L N D + P +L R+L+ + GS
Sbjct: 524 WLHTNPWDCSCPRIDYLS---RWLNKNSQKEQGS 554
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 1e-29
Identities = 61/284 (21%), Positives = 96/284 (33%), Gaps = 25/284 (8%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+P ++P + + LDL L SF + L VL LS +
Sbjct: 21 KIPDNLP-------FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQ 73
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD 223
L LS L L+ N + A S L +L +L + L +++ LN++
Sbjct: 74 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 133
Query: 224 NALTGF-IPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNL----AKLVISENGLEGQL 278
N + F +P NL L LDLS N I +LR L + L +S N + +
Sbjct: 134 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FI 192
Query: 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNITGSWPILSTNGNA- 336
G F + +L + L N + T L L + + +A
Sbjct: 193 QPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSAL 251
Query: 337 ------SGAVFNISNNMLYGDLNSSSFRKF---SLIDLSSNYFQ 371
+ F ++ Y D F S L S +
Sbjct: 252 EGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE 295
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 6e-29
Identities = 60/255 (23%), Positives = 91/255 (35%), Gaps = 10/255 (3%)
Query: 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGE 181
+ IP + L LS N L + +L LDLSR +
Sbjct: 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI 67
Query: 182 IPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLI 241
A L +L+ L L N LSS+Q L + L +G+L L
Sbjct: 68 EDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 127
Query: 242 ELDLSKNSI-SGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVV----DLSG 296
EL+++ N I S LP L NL L +S N ++ + L Q+ ++ DLS
Sbjct: 128 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSL 186
Query: 297 NKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSS 356
N ++ + F L L L N + + G A V + + N
Sbjct: 187 NPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEK 245
Query: 357 FRKFSLIDLSSNYFQ 371
F K +L L + +
Sbjct: 246 FDKSALEGLCNLTIE 260
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 4e-28
Identities = 55/296 (18%), Positives = 95/296 (32%), Gaps = 22/296 (7%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
+ +L+ LS+ +G + F L +LQ L +L+ G+L L
Sbjct: 70 GAYQSLSHLSTLILTGNPIQSLALGAFS-GLSSLQKLVAVETNLASLENFPIGHLKTLKE 128
Query: 147 LYLSGNSLA-GNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLT----RLNLASNF 201
L ++ N + +P L L +LDLS N + + +L + L+L+ N
Sbjct: 129 LNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188
Query: 202 FTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLE--- 257
I G + + L L +N + + L L L LE
Sbjct: 189 MN-FIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 247
Query: 258 ---LRGLRNL--AKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPN 312
L GL NL + ++ LF L + L ++ + +
Sbjct: 248 KSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-G 305
Query: 313 LRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSN 368
+ L+L T S ++N + +DLS N
Sbjct: 306 WQHLELVNCKFGQ----FPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRN 357
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 9e-23
Identities = 44/236 (18%), Positives = 78/236 (33%), Gaps = 14/236 (5%)
Query: 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG 204
+ +P L NLDLS N L + L L+L+
Sbjct: 10 ITYQCMELNFY-KIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT 66
Query: 205 QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNL 264
SLS + L L+ N + L L +L + +++ + L+ L
Sbjct: 67 IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTL 126
Query: 265 AKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF-----LRPNLRFLDLS 319
+L ++ N ++ F L L+ +DLS NK+ + T + LDLS
Sbjct: 127 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS-IYCTDLRVLHQMPLLNLSLDLS 185
Query: 320 RNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFS---LIDLSSNYFQG 372
N + P + NN ++ + + + + L F+
Sbjct: 186 LNPMNFIQP--GAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN 239
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-32
Identities = 48/217 (22%), Positives = 86/217 (39%), Gaps = 13/217 (5%)
Query: 108 SIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167
+I E ++ + SL ++ + + L LSGN L+ A L K
Sbjct: 1 AIHEIKQN-GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTK 59
Query: 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT 227
L L+LS N+L E + L L L+L +N+ L SI+ L+ ++N ++
Sbjct: 60 LELLNLSSNVLY-ETL-DLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS 112
Query: 228 GFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLD 287
S + L+ N I+ L+ + L + N ++ L + D
Sbjct: 113 RVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSD 169
Query: 288 QLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
L+ ++L N + + + L+ LDLS N +
Sbjct: 170 TLEHLNLQYNFIY-DVKGQVVF-AKLKTLDLSSNKLA 204
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 74.5 bits (183), Expect = 3e-14
Identities = 27/245 (11%), Positives = 62/245 (25%), Gaps = 32/245 (13%)
Query: 108 SIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLA-GNVPATLGELK 166
+ F + + LR+ L I + L L GN G + + +
Sbjct: 205 FMGPEFQ-SAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQ 262
Query: 167 KLSNLDLSRN-LLTGEI------------------PNAISLLGNLTRLNLASNFFT---- 203
++ + LTG+ L L +
Sbjct: 263 RVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQG 322
Query: 204 ---GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRG 260
++ + + + ++ I I L+ K ++ + R
Sbjct: 323 SETERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRA 382
Query: 261 LRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLD-GALPATLFLRPNLRFLDLS 319
L + G + LQ++ + + + +R D+
Sbjct: 383 HAELDGTLQQAVGQIEL--QHATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMY 440
Query: 320 RNNIT 324
++ T
Sbjct: 441 QHKET 445
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 2e-32
Identities = 49/223 (21%), Positives = 88/223 (39%), Gaps = 12/223 (5%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
++P IP ++LDL + F + L L L+ N ++ P
Sbjct: 25 AVPEGIPTE-------TRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFN 77
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGL-YSLSSIQFLNLS 222
L L L L N L + L NLT+L+++ N + + L +++ L +
Sbjct: 78 NLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVG 136
Query: 223 DNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEG 281
DN L +I L+ L +L L K +++ L L L L + + + +
Sbjct: 137 DNDLV-YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN-AIRDY 194
Query: 282 LFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
F L +L+V+++S + NL L ++ N+T
Sbjct: 195 SFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT 237
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 4e-32
Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 5/209 (2%)
Query: 117 LPALQVLDLRSCSLSGSIP-GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175
L L+ L++ L I +F L+ L L L +L L L L L L
Sbjct: 127 LYNLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRH 185
Query: 176 NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG 235
+ + L L L ++ + + ++ L+++ LT V
Sbjct: 186 LNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVR 245
Query: 236 NLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLS 295
+L L L+LS N IS L L L ++ + L + F L+ L+V+++S
Sbjct: 246 HLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLA-VVEPYAFRGLNYLRVLNVS 304
Query: 296 GNKLDGALPATLFLR-PNLRFLDLSRNNI 323
GN+L L ++F NL L L N +
Sbjct: 305 GNQLT-TLEESVFHSVGNLETLILDSNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 1e-16
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 5/167 (2%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
++L +L L L++ +I ++ RL L+VL++ ++ + L
Sbjct: 170 EALSHLHGLIVLRLRHLNI-NAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTS 228
Query: 147 LYLSGNSLAGNVPA-TLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
L ++ +L VP + L L L+LS N ++ + + L L + L
Sbjct: 229 LSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLA-V 286
Query: 206 IPSG-LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSIS 251
+ L+ ++ LN+S N LT S ++ L L L N ++
Sbjct: 287 VEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-31
Identities = 67/295 (22%), Positives = 115/295 (38%), Gaps = 56/295 (18%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+P +P +LDL++ ++ G F NL L+ L L N ++ P
Sbjct: 45 KVPKDLPPD-------TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFA 97
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYS-LSSIQFLNLS 222
L KL L LS+N L E+P + L L + N T ++ +++ L+ + + L
Sbjct: 98 PLVKLERLYLSKNQLK-ELPE--KMPKTLQELRVHENEIT-KVRKSVFNGLNQMIVVELG 153
Query: 223 DNALT-GFIPSEV-GNLDKLIELDLSKNSISGSLP---------LEL------------- 258
N L I + + KL + ++ +I+ ++P L L
Sbjct: 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTELHLDGNKITKVDAASL 212
Query: 259 RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDL 318
+GL NLAKL +S N + + G L+ + L+ NKL +P L ++ + L
Sbjct: 213 KGLNNLAKLGLSFNSIS-AVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYL 270
Query: 319 SRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGT 373
NNI+ I +N ++ +S + L SN Q
Sbjct: 271 HNNNIS-----------------AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYW 308
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 2e-27
Identities = 44/215 (20%), Positives = 81/215 (37%), Gaps = 15/215 (6%)
Query: 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNV--PATLGELKKLSNLDLS 174
LQ L + ++ F L+++ V+ L N L + +KKLS + ++
Sbjct: 120 PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA 179
Query: 175 RNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSE 233
+T IP L +LT L+L N T ++ + L L+++ L LS N+++
Sbjct: 180 DTNIT-TIPQ--GLPPSLTELHLDGNKIT-KVDAASLKGLNNLAKLGLSFNSISAVDNGS 235
Query: 234 VGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE-----GQLSEGLFPTLDQ 288
+ N L EL L+ N + +P L + + + + N + G
Sbjct: 236 LANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKAS 294
Query: 289 LQVVDLSGNKL-DGALPATLFLR-PNLRFLDLSRN 321
V L N + + + F + L
Sbjct: 295 YSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 2e-24
Identities = 38/193 (19%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 117 LPALQVLDLRSCSLSGSI--PGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLS 174
L + V++L + L S G+F + +L+ + ++ ++ +P L L+ L L
Sbjct: 144 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLD 200
Query: 175 RNLLTGEIP-NAISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPS 232
N +T ++ ++ L NL +L L+ N + + +G L + ++ L+L++N L +P
Sbjct: 201 GNKIT-KVDAASLKGLNNLAKLGLSFNSIS-AVDNGSLANTPHLRELHLNNNKLV-KVPG 257
Query: 233 EVGNLDKLIELDLSKNSISG------SLPLELRGLRNLAKLVISENGLE-GQLSEGLFPT 285
+ + + + L N+IS P + + + + N ++ ++ F
Sbjct: 258 GLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317
Query: 286 LDQLQVVDLSGNK 298
+ V L K
Sbjct: 318 VYVRAAVQLGNYK 330
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 5e-31
Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 8/209 (3%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175
L L++L L + G+F L+ LN L L N L L KL L L
Sbjct: 86 HLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRN 145
Query: 176 NLLTGEIP-NAISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSE 233
N + IP A + + +L RL+L I G LS++++LNL+ L IP+
Sbjct: 146 NPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN- 202
Query: 234 VGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVD 293
+ L KL ELDLS N +S P +GL +L KL + ++ ++ + F L L ++
Sbjct: 203 LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEIN 261
Query: 294 LSGNKLDGALPATLFLR-PNLRFLDLSRN 321
L+ N L LP LF +L + L N
Sbjct: 262 LAHNNLT-LLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 1e-30
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 17/225 (7%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+P I ++L+L + SF +L L +L LS N +
Sbjct: 57 EVPDGIS-------TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFN 109
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYS-LSSIQFLNLS 222
L L+ L+L N LT A L L L L +N IPS ++ + S++ L+L
Sbjct: 110 GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLG 168
Query: 223 D-NALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSE 280
+ L+ +I L L L+L+ ++ +P L L L +L +S N L +
Sbjct: 169 ELKRLS-YISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLS-AIRP 224
Query: 281 GLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNIT 324
G F L LQ + + +++ + F +L ++L+ NN+T
Sbjct: 225 GSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAHNNLT 268
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 90.2 bits (224), Expect = 2e-19
Identities = 51/225 (22%), Positives = 82/225 (36%), Gaps = 37/225 (16%)
Query: 76 RIGRLNPRFAVDSLGNLTLLS-SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSI 134
I + A + L NL L N L+ +IP L L+ L LR+ +
Sbjct: 99 HIRTIEIG-AFNGLANLNTLELFDNR--LT---TIPNGAFVYLSKLKELWLRNNPIESIP 152
Query: 135 PGSFGNLSRLNVLYLSG-NSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLT 193
+F + L L L L+ L L L+L+ L EIP ++ L L
Sbjct: 153 SYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLD 210
Query: 194 RLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252
L+L+ N + I G L +Q L + + + + NL L+E++L+ N+++
Sbjct: 211 ELDLSGNHLS-AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT- 268
Query: 253 SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGN 297
L LF L L+ + L N
Sbjct: 269 ------------------------LLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 3e-17
Identities = 43/143 (30%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Query: 110 PEWFGYRLPALQVLDLRSCSLSGSIP-GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKL 168
F R+P+L+ LDL I G+F LS L L L+ +L +P L L KL
Sbjct: 153 SYAFN-RIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKL 209
Query: 169 SNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYS-LSSIQFLNLSDNALT 227
LDLS N L+ P + L +L +L + + I + L S+ +NL+ N LT
Sbjct: 210 DELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAHNNLT 268
Query: 228 GFIPSEVGNLDKLIELDLSKNSI 250
L L + L N
Sbjct: 269 LLPHDLFTPLHHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 5e-15
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 76 RIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP 135
I + P +A + + +L L LS I E L L+ L+L C+L IP
Sbjct: 147 PIESI-PSYAFNRIPSLRRLDLGELKRLS---YISEGAFEGLSNLRYLNLAMCNLR-EIP 201
Query: 136 GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195
+ L +L+ L LSGN L+ P + L L L + ++ + NA L +L +
Sbjct: 202 -NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEI 260
Query: 196 NLASNFFTGQIPSGLY-SLSSIQFLNLSDNAL 226
NLA N T +P L+ L ++ ++L N
Sbjct: 261 NLAHNNLT-LLPHDLFTPLHHLERIHLHHNPW 291
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 6e-31
Identities = 66/223 (29%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
++P IP A Q + L +S SF L +L+L N LA A
Sbjct: 25 AVPVGIP-------AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFT 77
Query: 164 ELKKLSNLDLSRNLLTGEIP-NAISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNL 221
L L LDLS N + LG L L+L ++ G L+++Q+L L
Sbjct: 78 GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYL 136
Query: 222 SDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLE-LRGLRNLAKLVISENGLEGQLS 279
DNAL +P + +L L L L N IS S+P RGL +L +L++ +N + +
Sbjct: 137 QDNALQ-ALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVA-HVH 193
Query: 280 EGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRN 321
F L +L + L N L ALP L++L L+ N
Sbjct: 194 PHAFRDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 5e-24
Identities = 45/187 (24%), Positives = 72/187 (38%), Gaps = 11/187 (5%)
Query: 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201
L VP + + L N ++ + NLT L L SN
Sbjct: 11 EPKVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNV 67
Query: 202 FTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLE-L 258
+I + L+ ++ L+LSDNA + L +L L L + + L
Sbjct: 68 LA-RIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLF 125
Query: 259 RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLD 317
RGL L L + +N L+ L + F L L + L GN++ ++P F +L L
Sbjct: 126 RGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLL 183
Query: 318 LSRNNIT 324
L +N +
Sbjct: 184 LHQNRVA 190
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 2e-15
Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP-GSFGNLSRLN 145
LG L L L P F L ALQ L L+ +L ++P +F +L L
Sbjct: 102 HGLGRLHTLHLDRCGLQELG---PGLF-RGLAALQYLYLQDNALQ-ALPDDTFRDLGNLT 156
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
L+L GN ++ L L L L +N + P+A LG L L L +N +
Sbjct: 157 HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-A 215
Query: 206 IPSGLY-SLSSIQFLNLSDNAL 226
+P+ L ++Q+L L+DN
Sbjct: 216 LPTEALAPLRALQYLRLNDNPW 237
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 124 bits (312), Expect = 2e-30
Identities = 55/224 (24%), Positives = 89/224 (39%), Gaps = 15/224 (6%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+P IP + L+L ++ +F +L L VL L NS+
Sbjct: 68 EVPQGIP-------SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFN 120
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLS 222
L L+ L+L N LT A L L L L +N IPS + S+ L+L
Sbjct: 121 GLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLG 179
Query: 223 D-NALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEG 281
+ L L L L+L +I +P L L L +L +S N ++ G
Sbjct: 180 ELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFP-EIRPG 236
Query: 282 LFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNIT 324
F L L+ + + +++ + F +L L+L+ NN++
Sbjct: 237 SFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNNLS 279
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 3e-30
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 8/209 (3%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175
L L+VL L S+ G+F L+ LN L L N L L KL L L
Sbjct: 97 HLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRN 156
Query: 176 NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEV 234
N + A + + +L RL+L I G L ++++LNL + +P+ +
Sbjct: 157 NPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMPN-L 214
Query: 235 GNLDKLIELDLSKNSISGSLPLE-LRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVD 293
L L EL++S N + GL +L KL + + + + F L L ++
Sbjct: 215 TPLVGLEELEMSGNHFP-EIRPGSFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELN 272
Query: 294 LSGNKLDGALPATLFLR-PNLRFLDLSRN 321
L+ N L +LP LF L L L N
Sbjct: 273 LAHNNLS-SLPHDLFTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 85.6 bits (212), Expect = 9e-18
Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 110 PEWFGYRLPALQVLDLRSCSLSGSIP-GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKL 168
F R+P+L LDL I G+F L L L L ++ ++P L L L
Sbjct: 164 SYAFN-RVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGL 220
Query: 169 SNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALT 227
L++S N P + L +L +L + ++ + I L+S+ LNL+ N L+
Sbjct: 221 EELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNNLS 279
Query: 228 GFIPSEVGNLDKLIELDLSKNSI 250
L L+EL L N
Sbjct: 280 SLPHDLFTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 5e-15
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 8/152 (5%)
Query: 76 RIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP 135
I + A + + +L L L I E L L+ L+L C++ +P
Sbjct: 158 PIESIPSY-AFNRVPSLMRLDLGELKKLE---YISEGAFEGLFNLKYLNLGMCNIK-DMP 212
Query: 136 GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195
+ L L L +SGN P + L L L + + ++ NA L +L L
Sbjct: 213 -NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVEL 271
Query: 196 NLASNFFTGQIPSGLY-SLSSIQFLNLSDNAL 226
NLA N + +P L+ L + L+L N
Sbjct: 272 NLAHNNLS-SLPHDLFTPLRYLVELHLHHNPW 302
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 3e-30
Identities = 55/283 (19%), Positives = 99/283 (34%), Gaps = 32/283 (11%)
Query: 114 GYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDL 173
G +++ LDL + F L L VL L+ N + L L L+L
Sbjct: 262 GLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNL 321
Query: 174 SRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSE 233
S NLL + L + ++L N L +Q L+L DNALT
Sbjct: 322 SYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT-----T 376
Query: 234 VGNLDKLIELDLSKNSISGSLPLELRG---------------------LRNLAKLVISEN 272
+ + + ++ LS N + + L + +L L++++N
Sbjct: 377 IHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQN 436
Query: 273 GLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-----PNLRFLDLSRNNITGSW 327
+ L+ + L N L A L +L+ L L+ N + S
Sbjct: 437 RFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLN-SL 495
Query: 328 PILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYF 370
P + + ++++N L ++ ++D+S N
Sbjct: 496 PPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQL 538
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 6e-30
Identities = 57/291 (19%), Positives = 104/291 (35%), Gaps = 32/291 (10%)
Query: 108 SIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNV-PATLGELK 166
+P+ L + L L + SF L +L +L L + L
Sbjct: 18 QVPQ----VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLP 73
Query: 167 KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQI--PSGLYSLSSIQFLNLSDN 224
L LDL + + P+A L +L L L + + +L ++ L+LS N
Sbjct: 74 NLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKN 133
Query: 225 ALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLELRGLR--NLAKLVISENGLEGQLSEG 281
+ G L+ L +D S N I EL L+ L+ ++ N L ++S
Sbjct: 134 QIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVD 193
Query: 282 LFPTLD-----QLQVVDLSGNKLDGALPAT------------LFLRPNLRFLDLSRNNIT 324
++ L+++D+SGN + L L ++ +NI
Sbjct: 194 WGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIK 253
Query: 325 G-SWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFS---LIDLSSNYFQ 371
+ +S ++S+ ++ LNS F +++L+ N
Sbjct: 254 DPDQNTFAGLARSSVRHLDLSHGFVF-SLNSRVFETLKDLKVLNLAYNKIN 303
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 1e-28
Identities = 73/313 (23%), Positives = 119/313 (38%), Gaps = 31/313 (9%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
S L L P +I + LP L++LDL S + P +F L L
Sbjct: 42 SSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101
Query: 147 LYLSGNSLAGNV--PATLGELKKLSNLDLSRNLLTG-EIPNAISLLGNLTRLNLASNFFT 203
L L L+ V LK L+ LDLS+N + + + L +L ++ +SN
Sbjct: 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161
Query: 204 GQIPSGLYSLS--SIQFLNLSDNALTGFIPSEVGNLDK------LIELDLSKN------- 248
L L ++ F +L+ N+L + + G L LD+S N
Sbjct: 162 LVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDIT 221
Query: 249 -----SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQ--LQVVDLSGNKLDG 301
+IS S L ++ + ++ + F L + ++ +DLS +
Sbjct: 222 GNFSNAISKSQAFSLILAHHIMGAGFGFHNIK-DPDQNTFAGLARSSVRHLDLSHGFVFS 280
Query: 302 ALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFS 361
+L+ L+L+ N I G + V N+S N+L G+L SS+F
Sbjct: 281 LNSRVFETLKDLKVLNLAYNKINKIADEAFY-GLDNLQVLNLSYNLL-GELYSSNFYGLP 338
Query: 362 ---LIDLSSNYFQ 371
IDL N+
Sbjct: 339 KVAYIDLQKNHIA 351
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 3e-24
Identities = 49/271 (18%), Positives = 91/271 (33%), Gaps = 21/271 (7%)
Query: 127 SCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAI 186
SCS G I + +L VP L ++L LS N + ++
Sbjct: 1 SCSFDGRI------------AFYRFCNLT-QVPQVLNTTERL---LLSFNYIRTVTASSF 44
Query: 187 SLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDL 245
L L L L S + I +L +++ L+L + + P L L EL L
Sbjct: 45 PFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRL 104
Query: 246 SKNSISGSL--PLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGAL 303
+S ++ R L+ L +L +S+N + F L+ L+ +D S N++
Sbjct: 105 YFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVC 164
Query: 304 PATL--FLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFS 361
L L F L+ N++ + + + G+ +
Sbjct: 165 EHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNF 224
Query: 362 LIDLSSNYFQGTVADDRGRNVSLGRNCLQSV 392
+S + + G + ++
Sbjct: 225 SNAISKSQAFSLILAHHIMGAGFGFHNIKDP 255
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 71.8 bits (176), Expect = 4e-13
Identities = 35/144 (24%), Positives = 52/144 (36%), Gaps = 10/144 (6%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSI-----PGSFGNLS 142
L + L + + P+L+ L L L + F LS
Sbjct: 421 FLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLS 480
Query: 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFF 202
L VLYL+ N L P L L L L+ N LT + + L NL L+++ N
Sbjct: 481 HLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT-VLSHN-DLPANLEILDISRNQL 538
Query: 203 TGQIPSGLYSLSSIQFLNLSDNAL 226
P SLS + +++ N
Sbjct: 539 LAPNPDVFVSLSVL---DITHNKF 559
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 3e-30
Identities = 71/306 (23%), Positives = 113/306 (36%), Gaps = 38/306 (12%)
Query: 82 PRFAVDSLGNLTLLS-SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGN 140
+A + L FNA + +P +P L VL L LS G F N
Sbjct: 85 DTYAFAYAHTIQKLYMGFNA--IR---YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHN 139
Query: 141 LSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200
+L L +S N+L T L NL LS N LT + +SL+ +L N++ N
Sbjct: 140 TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVD--LSLIPSLFHANVSYN 196
Query: 201 FFT------------------GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIE 242
+ + + + L L N LT + + N L+E
Sbjct: 197 LLSTLAIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVE 252
Query: 243 LDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGA 302
+DLS N + + ++ L +L IS N L L+ + L+V+DLS N L
Sbjct: 253 VDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALN-LYGQPIPTLKVLDLSHNHLL-H 309
Query: 303 LPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSL 362
+ L L L N+I L + + + +S+N + + FR +
Sbjct: 310 VERNQPQFDRLENLYLDHNSIV----TLKLSTHHTLKNLTLSHNDWDCNSLRALFRNVAR 365
Query: 363 IDLSSN 368
+
Sbjct: 366 PAVDDA 371
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 6e-30
Identities = 37/211 (17%), Positives = 80/211 (37%), Gaps = 16/211 (7%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175
L +++ ++ ++ + ++ +L L+ + + L +
Sbjct: 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGF 102
Query: 176 NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGL-YSLSSIQFLNLSDNALTGFIPSEV 234
N + P+ + LT L L N + +P G+ ++ + L++S+N L I +
Sbjct: 103 NAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDT 160
Query: 235 -GNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVD 293
L L LS N ++ ++L + +L +S N L ++ +D
Sbjct: 161 FQATTSLQNLQLSSNRLTH---VDLSLIPSLFHANVSYNLLS------TLAIPIAVEELD 211
Query: 294 LSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
S N ++ + + L L L NN+T
Sbjct: 212 ASHNSIN-VVRGPVN--VELTILKLQHNNLT 239
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 1e-29
Identities = 51/238 (21%), Positives = 91/238 (38%), Gaps = 20/238 (8%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVL 147
+L N +++ F S + +P +++L+L + +F + L
Sbjct: 43 TLNNQKIVT-FKNSTMR---KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKL 98
Query: 148 YLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIP 207
Y+ N++ P + L+ L L RN L+ LT L++++N +I
Sbjct: 99 YMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIE 157
Query: 208 SG-LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAK 266
+ +S+Q L LS N LT ++ + L ++S N +S L + +
Sbjct: 158 DDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS-----TLAIPIAVEE 209
Query: 267 LVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
L S N + + + L L L N L L P L +DLS N +
Sbjct: 210 LDASHNSIN-VVRGPVNVELTIL---KLQHNNLT-DTAWLLNY-PGLVEVDLSYNELE 261
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-25
Identities = 44/256 (17%), Positives = 90/256 (35%), Gaps = 21/256 (8%)
Query: 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRN 176
+ + + L+ ++ +++ A L +++ L+L+
Sbjct: 20 DCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDL 79
Query: 177 LLTGEIPNAISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEVG 235
+ A + + +L + N +P ++ + L L N L+
Sbjct: 80 QIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFH 138
Query: 236 NLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLS 295
N KL L +S N++ + +L L +S N L + L P L ++S
Sbjct: 139 NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDLSLIP---SLFHANVS 194
Query: 296 GNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSS 355
N L TL + + LD S N+I ++ N + + +N L +++
Sbjct: 195 YNLLS-----TLAIPIAVEELDASHNSIN----VVRGPVNVELTILKLQHNNL---TDTA 242
Query: 356 SFRKFS---LIDLSSN 368
+ +DLS N
Sbjct: 243 WLLNYPGLVEVDLSYN 258
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 5e-25
Identities = 43/238 (18%), Positives = 87/238 (36%), Gaps = 15/238 (6%)
Query: 133 SIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNL 192
I + +++ + L + + + + +
Sbjct: 12 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 71
Query: 193 TRLNLASNFFTGQIPSGLYS-LSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSIS 251
LNL +I + ++ +IQ L + NA+ P N+ L L L +N +S
Sbjct: 72 ELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS 130
Query: 252 GSLPLEL-RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310
SLP + L L +S N LE ++ + F LQ + LS N+L + +L
Sbjct: 131 -SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HVDLSLI-- 185
Query: 311 PNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSN 368
P+L ++S N ++ + + + S+N + + + +++ L N
Sbjct: 186 PSLFHANVSYNLLS------TLAIPIAVEELDASHNSI-NVVRGPVNVELTILKLQHN 236
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 3e-09
Identities = 13/103 (12%), Positives = 36/103 (34%), Gaps = 3/103 (2%)
Query: 223 DNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGL 282
I S + ++ + + E L N + + + +L L
Sbjct: 6 RQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAAL 64
Query: 283 FPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNIT 324
+ Q+++++L+ +++ + F ++ L + N I
Sbjct: 65 LDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIR 106
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 7e-30
Identities = 71/287 (24%), Positives = 119/287 (41%), Gaps = 24/287 (8%)
Query: 86 VDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLN 145
S +L +++ A L + + Y L L ++ + L+ P NL++L
Sbjct: 39 TVSQTDLDQVTTLQADRLGI--KSIDGVEY-LNNLTQINFSNNQLTDITP--LKNLTKLV 93
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
+ ++ N +A P L L L+ L L N +T P + L NL RL L+SN +
Sbjct: 94 DILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD- 148
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLA 265
S L L+S+Q L+ + + NL L LD+S N +S L L NL
Sbjct: 149 -ISALSGLTSLQQLSFGNQVTD---LKPLANLTTLERLDISSNKVSD--ISVLAKLTNLE 202
Query: 266 KLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG 325
L+ + N + ++ L L + L+GN+L TL NL LDL+ N I+
Sbjct: 203 SLIATNNQISD-ITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISN 257
Query: 326 SWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQG 372
P+ +G + N + + + ++L+ N +
Sbjct: 258 LAPL---SGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED 301
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-29
Identities = 69/287 (24%), Positives = 115/287 (40%), Gaps = 24/287 (8%)
Query: 86 VDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLN 145
+ L NLT L+ + P L L L+L S ++S + L+ L
Sbjct: 105 ITPLANLTNLTGLTLFNNQITDIDP--LKN-LTNLNRLELSSNTISD--ISALSGLTSLQ 159
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
L N + P L L L LD+S N ++ + ++ L NL L +N +
Sbjct: 160 QLSFG-NQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDI 214
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLA 265
P L L+++ L+L+ N L + +L L +LDL+ N IS PL GL L
Sbjct: 215 TP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLS--GLTKLT 268
Query: 266 KLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG 325
+L + N + +S L L ++L+ N+L+ + L NL +L L NNI+
Sbjct: 269 ELKLGANQISN-ISP--LAGLTALTNLELNENQLED-ISPISNL-KNLTYLTLYFNNISD 323
Query: 326 SWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQG 372
P+ + NN + + ++ + + N
Sbjct: 324 ISPV---SSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISD 367
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 1e-25
Identities = 69/292 (23%), Positives = 107/292 (36%), Gaps = 48/292 (16%)
Query: 86 VDSLGNLTLLSSFNASG--LSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSR 143
+ LG LT L + +G L G++ L L LDL + +S P L++
Sbjct: 214 ITPLGILTNLDELSLNGNQLKDIGTLAS-----LTNLTDLDLANNQISNLAP--LSGLTK 266
Query: 144 LNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFT 203
L L L N ++ P L L L+NL+L+ N L P IS L NLT L L N +
Sbjct: 267 LTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNIS 322
Query: 204 GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRN 263
P + SL+ +Q L +N ++ S + NL + L N IS PL
Sbjct: 323 DISP--VSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTPLA------ 372
Query: 264 LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNI 323
L ++ + L+ P N+ + +N
Sbjct: 373 ---------------------NLTRITQLGLNDQAWTN-APVNYK--ANVSIPNTVKNVT 408
Query: 324 TGSWPILSTNGNASGAVFNISNNMLYGDLNSS-SFRKFSLIDLSSNYFQGTV 374
+ + S +I+ N+ S +F + I + F GTV
Sbjct: 409 GALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTV 460
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 7e-24
Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 19/232 (8%)
Query: 137 SFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196
+ L+ L ++ V +L +++ L R + + + L NLT++N
Sbjct: 19 TDTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK--SIDGVEYLNNLTQIN 74
Query: 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPL 256
++N T P L +L+ + + +++N + P + NL L L L N I+ PL
Sbjct: 75 FSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPL 130
Query: 257 ELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFL 316
+ L NL +L +S N + +S L LQ + D A L L L
Sbjct: 131 K--NLTNLNRLELSSNTISD-ISA--LSGLTSLQQLSFGNQVTDLKPLANL---TTLERL 182
Query: 317 DLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSN 368
D+S N ++ +L+ N +NN + + L+ N
Sbjct: 183 DISSNKVS-DISVLAKLTNLE--SLIATNNQISDITPLGILTNLDELSLNGN 231
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 8e-13
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 12/171 (7%)
Query: 86 VDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLN 145
+ + NL L+ ++ P L LQ L + +S S NL+ +N
Sbjct: 302 ISPISNLKNLTYLTLYFNNISDISP--VSS-LTKLQRLFFYNNKVSD--VSSLANLTNIN 356
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
L N ++ P L L +++ L L+ T N N++ N N
Sbjct: 357 WLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVN---YKANVSIPNTVKNVTGAL 411
Query: 206 I-PSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255
I P+ + S +++ N + + + + + + SG++
Sbjct: 412 IAPATISDGGSYTEPDITWNLPS-YTNEVSYTFSQPVTIGKGTTTFSGTVT 461
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 6e-29
Identities = 37/196 (18%), Positives = 68/196 (34%), Gaps = 24/196 (12%)
Query: 496 SGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYM 555
SGV E L + + +G G ++K L V VK + +
Sbjct: 10 SGVD--LGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNE 66
Query: 556 MELDLFSRVSHARLVPLLGQCLE---HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQS 612
E+ + H ++ +G + + L+ + G L+ L
Sbjct: 67 YEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---------NV 117
Query: 613 LDWITRLKIAIGAAEGLSYLHHE-------CNPPLVHRDVQASSILLDDKFEVRLG--SL 663
+ W IA A GL+YLH + P + HRD+++ ++LL + + L
Sbjct: 118 VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177
Query: 664 SELHAQGDSHQNVLTR 679
+ G S + +
Sbjct: 178 ALKFEAGKSAGDTHGQ 193
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 3e-28
Identities = 61/264 (23%), Positives = 99/264 (37%), Gaps = 25/264 (9%)
Query: 80 LNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRL--PALQVLDLRSCSLSGSIPGS 137
+ D + +L+L +P I L LQ L L + ++G+ P
Sbjct: 56 ADLGQFTDIIKSLSL-KRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114
Query: 138 FGNLSRLNV--LYLSGNSLAGNVPATLGEL-----KKLSNLDLSRNLLTGEIPNAISLLG 190
+ ++ L L S A A L EL L L +++ + +
Sbjct: 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173
Query: 191 NLTRLNLASNFFTGQIP----SGLYSLSSIQFLNLSDNALT---GFIPSEVGNLDKLIEL 243
L+ L+L+ N G+ ++Q L L + + G + +L L
Sbjct: 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGL 233
Query: 244 DLSKNSISGSLPLEL-RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGA 302
DLS NS+ + L L +S GL+ Q+ +GL +L V+DLS N+LD
Sbjct: 234 DLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPA---KLSVLDLSYNRLDR- 288
Query: 303 LPATLFLRPNLRFLDLSRNNITGS 326
P+ L P + L L N S
Sbjct: 289 NPSPDEL-PQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 3e-10
Identities = 53/295 (17%), Positives = 91/295 (30%), Gaps = 51/295 (17%)
Query: 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL 177
P + SC+ S P S N L + L G + L L +
Sbjct: 5 PCELDEESCSCNFSDPKPDWS---SAFNCLGAADVELYGG-------GRSLEYLLKRVDT 54
Query: 178 LTGEIPNAISL-LGNLTRLNLASNFFTGQIPSG---LYSLSSIQFLNLSDNALTGFIPSE 233
+ +L RL + + +I G + +S +Q L L + +TG P
Sbjct: 55 EADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114
Query: 234 VGNLD--KLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQV 291
+ L L+L S + L L+ K L+V
Sbjct: 115 LLEATGPDLNILNLRNVSWAT-RDAWLAELQQWLKP--------------------GLKV 153
Query: 292 VDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASG---AVFNISNNM- 347
+ ++ + + P L LDLS N G ++S V + N
Sbjct: 154 LSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGM 213
Query: 348 --LYGDLNSSSFRKFSL--IDLSSNYFQGTVADDRG------RNVSLGRNCLQSV 392
G ++ + + L +DLS N + +++L L+ V
Sbjct: 214 ETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQV 268
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 1e-27
Identities = 50/238 (21%), Positives = 93/238 (39%), Gaps = 20/238 (8%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVL 147
+L N +++ F S + +P +++L+L + +F + L
Sbjct: 49 TLNNQKIVT-FKNSTMR---KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKL 104
Query: 148 YLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIP 207
Y+ N++ P + L+ L L RN L+ LT L++++N +I
Sbjct: 105 YMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIE 163
Query: 208 SG-LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAK 266
+ +S+Q L LS N LT ++ + L ++S N +S L + +
Sbjct: 164 DDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS-----TLAIPIAVEE 215
Query: 267 LVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
L S N + + + +L ++ L N L L P L +DLS N +
Sbjct: 216 LDASHNSIN-VVRGPVNV---ELTILKLQHNNLT-DTAWLLNY-PGLVEVDLSYNELE 267
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-24
Identities = 44/253 (17%), Positives = 91/253 (35%), Gaps = 21/253 (8%)
Query: 120 LQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLT 179
+ + + L+ ++ +++ A L +++ L+L+ +
Sbjct: 29 FYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE 88
Query: 180 GEIPNAISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEVGNLD 238
A + + +L + N +P ++ + L L N L+ N
Sbjct: 89 EIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTP 147
Query: 239 KLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNK 298
KL L +S N++ + +L L +S N L + L P L ++S N
Sbjct: 148 KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDLSLIP---SLFHANVSYNL 203
Query: 299 LDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFR 358
L +TL + + LD S N+I ++ N + + +N L +++
Sbjct: 204 L-----STLAIPIAVEELDASHNSIN----VVRGPVNVELTILKLQHNNL---TDTAWLL 251
Query: 359 KFS---LIDLSSN 368
+ +DLS N
Sbjct: 252 NYPGLVEVDLSYN 264
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-23
Identities = 43/244 (17%), Positives = 87/244 (35%), Gaps = 15/244 (6%)
Query: 127 SCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAI 186
I + +++ + L + + + +
Sbjct: 12 RQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALL 71
Query: 187 SLLGNLTRLNLASNFFTGQIPSGLYS-LSSIQFLNLSDNALTGFIPSEVGNLDKLIELDL 245
+ LNL +I + ++ +IQ L + NA+ P N+ L L L
Sbjct: 72 DSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130
Query: 246 SKNSISGSLPLEL-RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALP 304
+N +S SLP + L L +S N LE ++ + F LQ + LS N+L +
Sbjct: 131 ERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT-HVD 187
Query: 305 ATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLID 364
+L P+L ++S N ++ + + + S+N + + + +++
Sbjct: 188 LSLI--PSLFHANVSYNLLS------TLAIPIAVEELDASHNSI-NVVRGPVNVELTILK 238
Query: 365 LSSN 368
L N
Sbjct: 239 LQHN 242
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 89.6 bits (222), Expect = 9e-19
Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 13/185 (7%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVL 147
+L + +AS S+ + L +L L+ +L+ N L +
Sbjct: 206 TLAIPIAVEELDASHNSI-NVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEV 259
Query: 148 YLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIP 207
LS N L + ++++L L +S N L + + L L+L+ N +
Sbjct: 260 DLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVE 317
Query: 208 SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKL 267
++ L L N++ + L L LS N + L RN+A+
Sbjct: 318 RNQPQFDRLENLYLDHNSIV-TLKL--STHHTLKNLTLSHNDWDCNSLRAL--FRNVARP 372
Query: 268 VISEN 272
+ +
Sbjct: 373 AVDDA 377
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 3e-27
Identities = 49/218 (22%), Positives = 81/218 (37%), Gaps = 35/218 (16%)
Query: 120 LQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGEL-------------K 166
LQ S +L+ +P N+ Y + + N P GE +
Sbjct: 13 LQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDR 71
Query: 167 KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNAL 226
+ L+L+ L+ +P L +L L + N T ++P SL S+ N + AL
Sbjct: 72 QAHELELNNLGLS-SLP---ELPPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLKAL 126
Query: 227 TGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTL 286
+ P L L +S N + LP EL+ L + + N L + L
Sbjct: 127 SDLPPL-------LEYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNN----SLKK-LPDLP 172
Query: 287 DQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
L+ + N+L+ LP L P L + N++
Sbjct: 173 PSLEFIAAGNNQLE-ELPELQNL-PFLTAIYADNNSLK 208
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 3e-26
Identities = 56/265 (21%), Positives = 89/265 (33%), Gaps = 49/265 (18%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFG------------YRLPALQVLDLRSCSLSGSI 134
N+ + + + + P G L+L + LS S+
Sbjct: 28 VEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SL 86
Query: 135 PGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISL------ 188
P + L L S NSL +P LK L + + L+ P L
Sbjct: 87 PELPPH---LESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQ 142
Query: 189 ---------LGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDK 239
L +++ +N ++P SL +F+ +N L E+ NL
Sbjct: 143 LEKLPELQNSSFLKIIDVDNNSLK-KLPDLPPSL---EFIAAGNNQLEEL--PELQNLPF 196
Query: 240 LIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL 299
L + NS+ LP +L +V N LE +L E L L + N L
Sbjct: 197 LTAIYADNNSLK-KLPDL---PLSLESIVAGNNILE-ELPE--LQNLPFLTTIYADNNLL 249
Query: 300 DGALPATLFLRPNLRFLDLSRNNIT 324
LP P+L L++ N +T
Sbjct: 250 -KTLPDLP---PSLEALNVRDNYLT 270
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 2e-25
Identities = 54/255 (21%), Positives = 91/255 (35%), Gaps = 49/255 (19%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
+ +L L N + +L P L+ L + + L +P N S L +
Sbjct: 108 ELPQSLKSLLVDNNNLKALSDLPPL--------LEYLGVSNNQLE-KLP-ELQNSSFLKI 157
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQI 206
+ + NSL +P L + N L E+P + L LT + +N ++
Sbjct: 158 IDVDNNSLK-KLP---DLPPSLEFIAAGNNQLE-ELPE-LQNLPFLTAIYADNNSLK-KL 210
Query: 207 PSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLR---- 262
P SL + + +N L E+ NL L + N + +LP L
Sbjct: 211 PDLPLSL---ESIVAGNNILE--ELPELQNLPFLTTIYADNNLLK-TLPDLPPSLEALNV 264
Query: 263 -------------NLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFL 309
+L L +SEN GL L ++ S N++ +L
Sbjct: 265 RDNYLTDLPELPQSLTFLDVSENIF-----SGLSELPPNLYYLNASSNEIR-SLCDLP-- 316
Query: 310 RPNLRFLDLSRNNIT 324
P+L L++S N +
Sbjct: 317 -PSLEELNVSNNKLI 330
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 1e-21
Identities = 44/255 (17%), Positives = 91/255 (35%), Gaps = 47/255 (18%)
Query: 86 VDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLN 145
+ L NL L++ A L ++P+ P+L+ L++R L+ +P +L+ L+
Sbjct: 230 LPELQNLPFLTTIYADNNLL-KTLPDL----PPSLEALNVRDNYLT-DLPELPQSLTFLD 283
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
V + L+ L L+ S N + + + L +L LN+++N +
Sbjct: 284 VSENIFSGLSE-------LPPNLYYLNASSNEIR-SLCD---LPPSLEELNVSNNKLI-E 331
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLR--- 262
+P+ ++ L S N L +P NL +L + N + P +
Sbjct: 332 LPA---LPPRLERLIASFNHLA-EVPELPQNL---KQLHVEYNPLR-EFPDIPESVEDLR 383
Query: 263 -------------NLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFL 309
NL +L + N L E + ++ + ++ ++
Sbjct: 384 MNSHLAEVPELPQNLKQLHVETN----PLRE-FPDIPESVEDLRMNSERVVDPYEFAHET 438
Query: 310 RPNLRFLDLSRNNIT 324
L ++
Sbjct: 439 TDKLEDDVFEHHHHH 453
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 1e-06
Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 17/108 (15%)
Query: 229 FIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLD- 287
FI + L E ++++ +P+E +++ + + + E G +
Sbjct: 2 FINPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREM 60
Query: 288 -----------QLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
Q ++L+ L +LP P+L L S N++T
Sbjct: 61 AVSRLRDCLDRQAHELELNNLGLS-SLPELP---PHLESLVASCNSLT 104
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 116 bits (291), Expect = 3e-27
Identities = 59/253 (23%), Positives = 93/253 (36%), Gaps = 55/253 (21%)
Query: 89 LGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLY 148
++T L + + SLP PE L+ L++ L+ S+P L L++
Sbjct: 60 PAHITTLVIPDNNLTSLPALPPE--------LRTLEVSGNQLT-SLPVLPPGLLELSIFS 110
Query: 149 LSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPS 208
L L L + N LT +P L L L+++ N +P+
Sbjct: 111 NPLTHLP-------ALPSGLCKLWIFGNQLT-SLPV---LPPGLQELSVSDNQLA-SLPA 158
Query: 209 GLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLR------ 262
L L +N LT +P L EL +S N ++ SLP L
Sbjct: 159 LPSELCK---LWAYNNQLT-SLPMLPSG---LQELSVSDNQLA-SLPTLPSELYKLWAYN 210
Query: 263 -----------NLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRP 311
L +L++S N L L +L+ + +SGN+L +LP
Sbjct: 211 NRLTSLPALPSGLKELIVSGNRL-----TSLPVLPSELKELMVSGNRLT-SLPMLP---S 261
Query: 312 NLRFLDLSRNNIT 324
L L + RN +T
Sbjct: 262 GLLSLSVYRNQLT 274
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 3e-25
Identities = 59/238 (24%), Positives = 91/238 (38%), Gaps = 38/238 (15%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
L LS F+ LP L L + L+ S+P L L+
Sbjct: 98 VLPPGLLELSIFSNPLTHLPAL--------PSGLCKLWIFGNQLT-SLPVLPPGLQELS- 147
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQI 206
+S N LA ++PA EL L N LT +P L L L+++ N +
Sbjct: 148 --VSDNQLA-SLPALPSELC---KLWAYNNQLT-SLPM---LPSGLQELSVSDNQLA-SL 196
Query: 207 PSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAK 266
P+ L L +N LT +P+ L EL +S N ++ SLP+ L+ L
Sbjct: 197 PTLPSELYK---LWAYNNRLT-SLPALPSGL---KELIVSGNRLT-SLPVLPSELKELM- 247
Query: 267 LVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
+S N L L L + + N+L LP +L + ++L N ++
Sbjct: 248 --VSGNRLT-SLPM----LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLS 297
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 94.2 bits (234), Expect = 4e-20
Identities = 46/209 (22%), Positives = 77/209 (36%), Gaps = 39/209 (18%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175
R A V +R+C +G VL + + L +P L ++ L +
Sbjct: 25 RGRAAVVQKMRACLNNG-----------NAVLNVGESGLT-TLPDCLP--AHITTLVIPD 70
Query: 176 NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG 235
N LT +P +L L L ++ N T +P L + + L
Sbjct: 71 NNLT-SLP---ALPPELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTHLPALPSG--- 122
Query: 236 NLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLS 295
L +L + N ++ SLP+ GL+ L +S+N L L +L +
Sbjct: 123 ----LCKLWIFGNQLT-SLPVLPPGLQE---LSVSDNQL-----ASLPALPSELCKLWAY 169
Query: 296 GNKLDGALPATLFLRPNLRFLDLSRNNIT 324
N+L +LP L+ L +S N +
Sbjct: 170 NNQLT-SLPMLP---SGLQELSVSDNQLA 194
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 1e-15
Identities = 50/224 (22%), Positives = 71/224 (31%), Gaps = 38/224 (16%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
L L ++N SLP LQ L + L+ S+P L +L
Sbjct: 158 ALPSELCKLWAYNNQLTSLPMLPS--------GLQELSVSDNQLA-SLPTLPSELYKLWA 208
Query: 147 -----------------LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLL 189
L +SGN L ++P ELK L +S N LT +P L
Sbjct: 209 YNNRLTSLPALPSGLKELIVSGNRL-TSLPVLPSELK---ELMVSGNRLT-SLPM---LP 260
Query: 190 GNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNS 249
L L++ N T ++P L LSS +NL N L+ + +
Sbjct: 261 SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIR 319
Query: 250 IS---GSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQ 290
S P E R L A + + Q
Sbjct: 320 FDMAGASAPRETRALHLAAADWLVPAREGEPAPADRWHMFGQED 363
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 114 bits (286), Expect = 9e-27
Identities = 46/267 (17%), Positives = 93/267 (34%), Gaps = 13/267 (4%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
S+P + A++ LDL ++ G + L VL L + +
Sbjct: 19 SIPSGLT-------AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFY 71
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYS-LSSIQFLNLS 222
L L +LDLS N L+ + L +L LNL N + + L+ L+++Q L +
Sbjct: 72 SLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIG 131
Query: 223 DNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEG 281
+ I L L EL++ S+ L+ +R++ L + + L E
Sbjct: 132 NVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEI 190
Query: 282 LFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVF 341
L ++ ++L L + L + + + + + N +
Sbjct: 191 FADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSV---LTDESFNELLKLL 247
Query: 342 NISNNMLYGDLNSSSFRKFSLIDLSSN 368
+ + + + + S +
Sbjct: 248 RYILELSEVEFDDCTLNGLGDFNPSES 274
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 1e-25
Identities = 51/307 (16%), Positives = 109/307 (35%), Gaps = 26/307 (8%)
Query: 89 LGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLY 148
NLT L + + I L +L L++++ SL S ++ ++ L
Sbjct: 119 FPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLT 178
Query: 149 LSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG---- 204
L + A + L + L+L L + + + + + + +
Sbjct: 179 LHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDE 238
Query: 205 ------QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLI--------ELDLSKNSI 250
++ + LS ++F + + N L F PSE + +L L + + +
Sbjct: 239 SFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL 298
Query: 251 SGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL-DGALPATLFL 309
L L + ++ + + + + L L+ +DLS N + + L +
Sbjct: 299 FYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACK 357
Query: 310 R--PNLRFLDLSRNNITG-SWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSL--ID 364
P+L+ L LS+N++ + +IS N + S + ++
Sbjct: 358 GAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF-HPMPDSCQWPEKMRFLN 416
Query: 365 LSSNYFQ 371
LSS +
Sbjct: 417 LSSTGIR 423
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 2e-20
Identities = 34/155 (21%), Positives = 57/155 (36%), Gaps = 4/155 (2%)
Query: 171 LDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFI 230
D T IP L + L+L+ N T L + +++Q L L + +
Sbjct: 10 CDGRSRSFT-SIP--SGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIE 66
Query: 231 PSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQ 290
+L L LDLS N +S L +L L + N + LFP L LQ
Sbjct: 67 GDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ 126
Query: 291 VVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNIT 324
+ + + + F +L L++ ++
Sbjct: 127 TLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 2e-20
Identities = 53/263 (20%), Positives = 87/263 (33%), Gaps = 56/263 (21%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSI---PGSFGNLSR 143
L + + +P F L +L+ LDL + G
Sbjct: 304 TVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPS 362
Query: 144 LNVLYLSGNSLA--GNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201
L L LS N L L LK L++LD+SRN +P++ + LNL+S
Sbjct: 363 LQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTG 421
Query: 202 FTGQIPSGL------------------YSLSSIQFLNLSDNALTGFIPSEVGNLDKLIEL 243
+ + + L +Q L +S N L +P L+ +
Sbjct: 422 IR-VVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPDAS-LFPVLLVM 478
Query: 244 DLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGAL 303
+S+N + + +G+F L LQ + L N D +
Sbjct: 479 KISRNQLK-------------------------SVPDGIFDRLTSLQKIWLHTNPWDCSC 513
Query: 304 PATLFLRPNLRFLDLSRNNITGS 326
P +L R+L+ + GS
Sbjct: 514 PRIDYLS---RWLNKNSQKEQGS 533
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 2e-13
Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 9/164 (5%)
Query: 212 SLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISE 271
S + + + T IPS + + LDLS N I+ +LR NL L++
Sbjct: 3 SCDASGVCDGRSRSFT-SIPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKS 59
Query: 272 NGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNITGSWPIL 330
+ + + F +L L+ +DLS N L +L ++ F +L++L+L N
Sbjct: 60 SRIN-TIEGDAFYSLGSLEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTS 117
Query: 331 STNGNASGAVFNISNNMLYGDLNSSSFRKFS---LIDLSSNYFQ 371
+ I N + ++ F + +++ + +
Sbjct: 118 LFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 1e-25
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 513 NFSETNLIKK---GHSGDLFKGTLAGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSH 566
+F + N + K HSG+L+KG G +VVK + + + K + E SH
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 567 ARLVPLLGQCLEHETEKL-LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGA 625
++P+LG C L+ +M G L + LH T+ +D +K A+
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF------VVDQSQAVKFALDM 120
Query: 626 AEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
A G+++LH P + + + S+++D+ R+
Sbjct: 121 ARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARIS 155
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 4e-25
Identities = 69/280 (24%), Positives = 108/280 (38%), Gaps = 39/280 (13%)
Query: 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRN 176
L + L ++ +I G L+ L L L N + ++ L L K++ L+LS N
Sbjct: 40 LDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGN 95
Query: 177 LLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGN 236
L + I+ L ++ L+L S T P L LS++Q L L N +T S +
Sbjct: 96 PLK-NVSA-IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNI--SPLAG 149
Query: 237 LDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSG 296
L L L + +S PL L L L +N + +S +L L V L
Sbjct: 150 LTNLQYLSIGNAQVSDLTPLA--NLSKLTTLKADDNKIS-DISP--LASLPNLIEVHLKN 204
Query: 297 NKLDGALPATLFLRPNLRFLDLSRNNIT-------GSWPILSTNGNASGAVF---NISNN 346
N++ P L NL + L+ IT + + + SGA IS+N
Sbjct: 205 NQISDVSP--LANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAPIAPATISDN 262
Query: 347 MLYGDLNSS------------SFRKFSLIDLSSNYFQGTV 374
Y N + +F + ++ F GTV
Sbjct: 263 GTYASPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTV 302
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 2e-24
Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 26/170 (15%)
Query: 502 FTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLH---SFKKESYMMEL 558
+ N LI +G G ++KG+L V VK S +F E + +
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRV 61
Query: 559 DLFSRVSHARLVPLLGQCLE----HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLD 614
+ H + + E LLV +Y G L L + D
Sbjct: 62 ---PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---------HTSD 109
Query: 615 WITRLKIAIGAAEGLSYLHHE------CNPPLVHRDVQASSILLDDKFEV 658
W++ ++A GL+YLH E P + HRD+ + ++L+ +
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 3e-23
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 513 NFSETNLIKK---GHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARL 569
++ E + + G G + K V +K++ S +K +++EL SRV+H +
Sbjct: 6 DYKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESERKA-FIVELRQLSRVNHPNI 63
Query: 570 VPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGL 629
V L G CL LV +Y G L + LH + L + + ++G+
Sbjct: 64 VKLYGACLNP---VCLVMEYAEGGSLYNVLHG-----AEPLPYYTAAHAMSWCLQCSQGV 115
Query: 630 SYLHHECNPPLVHRDVQASSILLDDKFEV 658
+YLH L+HRD++ ++LL V
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTV 144
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 3e-23
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 22/227 (9%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPA-TL 162
+P ++P + + LDL L SF + L VL LS + +
Sbjct: 21 KIPDNLP-------FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAY 72
Query: 163 GELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYS-LSSIQFLNL 221
L LS L L+ N + A S L +L +L + + L +++ LN+
Sbjct: 73 QSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNV 131
Query: 222 SDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLE-LRGLRNL----AKLVISENGLE 275
+ N + F E NL L LDLS N I S+ LR L + L +S N +
Sbjct: 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMN 190
Query: 276 GQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRN 321
+ G F + +L+ + L N+L ++P +F R +L+ + L N
Sbjct: 191 -FIQPGAFKEI-RLKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 6e-22
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 13/187 (6%)
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
L LS N L + +L LDLSR + A L +L+ L L N
Sbjct: 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-S 90
Query: 206 IPSGLYS-LSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLE--LRGL 261
+ G +S LSS+Q L + L + + G+L L EL+++ N I S L L
Sbjct: 91 LALGAFSGLSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLIQ-SFKLPEYFSNL 148
Query: 262 RNLAKLVISENGLEGQLSEGLFPTLDQLQVV----DLSGNKLDGALPATLFLRPNLRFLD 317
NL L +S N ++ + L Q+ ++ DLS N ++ + F L+ L
Sbjct: 149 TNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKELA 206
Query: 318 LSRNNIT 324
L N +
Sbjct: 207 LDTNQLK 213
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 3e-12
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLEL-RGLRNL 264
IP L S + L+LS N L + +L LDLS+ I ++ + L +L
Sbjct: 22 IPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHL 78
Query: 265 AKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRP-NLRFLDLSRNNI 323
+ L+++ N ++ L+ G F L LQ + L +L L+ L+++ N I
Sbjct: 79 STLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLI 136
Query: 324 T 324
Sbjct: 137 Q 137
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 3e-23
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 27/214 (12%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGN---SLAGNVPATLGELKKLSNLD 172
+L+ S++ ++ L+ ++ + + + S+ G + L ++ L
Sbjct: 19 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQG-----IQYLPNVTKLF 71
Query: 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIP--SGLYSLSSIQFLNLSDNALTGFI 230
L+ N LT +I ++ L NL L L N +I S L L ++ L+L N ++
Sbjct: 72 LNGNKLT-DIKP-LTNLKNLGWLFLDEN----KIKDLSSLKDLKKLKSLSLEHNGISDIN 125
Query: 231 PSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQ 290
+ +L +L L L N I+ L L L L + +N + + L +LQ
Sbjct: 126 G--LVHLPQLESLYLGNNKITDITVLS--RLTKLDTLSLEDNQIS-DIVP--LAGLTKLQ 178
Query: 291 VVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
+ LS N + L NL L+L
Sbjct: 179 NLYLSKNHISDLRA--LAGLKNLDVLELFSQECL 210
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 102 bits (254), Expect = 8e-23
Identities = 56/269 (20%), Positives = 95/269 (35%), Gaps = 23/269 (8%)
Query: 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRN 176
L ++ + + + S+ G L + L+L+GN L P L LK L L L N
Sbjct: 42 LNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDEN 97
Query: 177 LLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGN 236
+ ++ + + L L L+L N + I +GL L ++ L L +N +T +
Sbjct: 98 KIK-DLSS-LKDLKKLKSLSLEHNGIS-DI-NGLVHLPQLESLYLGNNKITDITV--LSR 151
Query: 237 LDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSG 296
L KL L L N IS + L GL L L +S+N + L L L V++L
Sbjct: 152 LTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLYLSKNHIS-DLRA--LAGLKNLDVLELFS 206
Query: 297 NKLDGALPATLFLRPNLRFLDLSRNNITGSWPI--------LSTNGNASGAVFNISNNML 348
+ + + ++ I + + +S
Sbjct: 207 QECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFY 266
Query: 349 YGDLNSSSFRKFSLIDLSSNYFQGTVADD 377
+ +F TV+ D
Sbjct: 267 QPVTIGKAKARFHGRVTQPLKEVYTVSYD 295
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 95.6 bits (237), Expect = 1e-20
Identities = 46/235 (19%), Positives = 81/235 (34%), Gaps = 33/235 (14%)
Query: 140 NLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199
+ L S+ V EL + + + + + + I L N+T+L L
Sbjct: 19 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNG 74
Query: 200 NFFTGQIP--SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLE 257
N ++ L +L ++ +L L +N + + +L KL L L N IS L
Sbjct: 75 N----KLTDIKPLTNLKNLGWLFLDENKIKDLSS--LKDLKKLKSLSLEHNGISDINGLV 128
Query: 258 LRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLD 317
L L L + N + ++ L +L + L N++ +P L L+ L
Sbjct: 129 --HLPQLESLYLGNNKIT-DITV--LSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181
Query: 318 LSRNNITGSWPI--------LSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLID 364
LS+N+I+ + L N + N D
Sbjct: 182 LSKNHISDLRALAGLKNLDVLELFSQ------ECLNKPINHQSNLVVPNTVKNTD 230
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 93.6 bits (232), Expect = 4e-20
Identities = 42/209 (20%), Positives = 81/209 (38%), Gaps = 20/209 (9%)
Query: 162 LGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNL 221
+ +L + +T + + L ++ ++ ++ + G+ L ++ L L
Sbjct: 17 DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SV-QGIQYLPNVTKLFL 72
Query: 222 SDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEG 281
+ N LT + NL L L L +N I L+ L+ L L + NG+ ++
Sbjct: 73 NGNKLTDI--KPLTNLKNLGWLFLDENKIKDLSSLK--DLKKLKSLSLEHNGIS-DING- 126
Query: 282 LFPTLDQLQVVDLSGNKLDGALP-ATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAV 340
L QL+ + L NK+ + L L L L N I+ L+
Sbjct: 127 -LVHLPQLESLYLGNNKITDITVLSRL---TKLDTLSLEDNQIS-DIVPLAGLTKLQ--N 179
Query: 341 FNISNNMLYGDLNS-SSFRKFSLIDLSSN 368
+S N + DL + + + +++L S
Sbjct: 180 LYLSKNHIS-DLRALAGLKNLDVLELFSQ 207
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 61.3 bits (148), Expect = 6e-10
Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 15/135 (11%)
Query: 192 LTRLNLASNFFTGQIP--SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNS 249
+ S I + + NL ++T + L+ + ++ + +
Sbjct: 1 MGETITVST----PIKQIFPDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSD 54
Query: 250 ISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFL 309
I ++ L N+ KL ++ N L + L L + L NK+ L
Sbjct: 55 IKSVQGIQ--YLPNVTKLFLNGNKLT-DIKP--LTNLKNLGWLFLDENKIKDLSS--LKD 107
Query: 310 RPNLRFLDLSRNNIT 324
L+ L L N I+
Sbjct: 108 LKKLKSLSLEHNGIS 122
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 4e-23
Identities = 33/187 (17%), Positives = 70/187 (37%), Gaps = 13/187 (6%)
Query: 140 NLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199
L +S A T ++ L+ + L+ +T ++ I N+ L + +
Sbjct: 21 TFKAYLNGLLGQSSTA---NITEAQMNSLTYITLANINVT-DLTG-IEYAHNIKDLTINN 75
Query: 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELR 259
T + + LS+++ L + +T + L L LD+S ++ S+ ++
Sbjct: 76 IHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKIN 133
Query: 260 GLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALP-ATLFLRPNLRFLDL 318
L + + +S NG + TL +L+ +++ + + P L L
Sbjct: 134 TLPKVNSIDLSYNGAITDIMP--LKTLPELKSLNIQFDGVHDYRGIEDF---PKLNQLYA 188
Query: 319 SRNNITG 325
I G
Sbjct: 189 FSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 2e-22
Identities = 25/156 (16%), Positives = 60/156 (38%), Gaps = 7/156 (4%)
Query: 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRN 176
+ +L + L + +++ + G + L ++ + L L L +
Sbjct: 43 MNSLTYITLANINVT-DLTG-IEYAHNIKDLTINNIHA--TNYNPISGLSNLERLRIMGK 98
Query: 177 LLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGN 236
+T + +S L +LT L+++ + I + + +L + ++LS N I +
Sbjct: 99 DVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKT 157
Query: 237 LDKLIELDLSKNSISGSLPLELRGLRNLAKLVISEN 272
L +L L++ + + +E L +L
Sbjct: 158 LPELKSLNIQFDGVHDYRGIE--DFPKLNQLYAFSQ 191
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 5e-22
Identities = 28/136 (20%), Positives = 55/136 (40%), Gaps = 5/136 (3%)
Query: 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRN 176
++ L + + + P LS L L + G + + L L L+ LD+S +
Sbjct: 65 AHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHS 122
Query: 177 LLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGN 236
I I+ L + ++L+ N I L +L ++ LN+ + + + + +
Sbjct: 123 AHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHDYRG--IED 179
Query: 237 LDKLIELDLSKNSISG 252
KL +L +I G
Sbjct: 180 FPKLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 6e-08
Identities = 20/158 (12%), Positives = 52/158 (32%), Gaps = 10/158 (6%)
Query: 212 SLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISE 271
+ + L ++ ++ L + L+ +++ +E N+ L I+
Sbjct: 21 TFKAYLNGLLGQSSTA---NITEAQMNSLTYITLANINVTDLTGIE--YAHNIKDLTINN 75
Query: 272 NGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILS 331
+ L L+ + + G + L +L LD+S + S +
Sbjct: 76 IHATN-YNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDS-ILTK 131
Query: 332 TNGNASGAVFNISNNMLYGDLNS-SSFRKFSLIDLSSN 368
N ++S N D+ + + +++ +
Sbjct: 132 INTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFD 169
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 18/117 (15%), Positives = 36/117 (30%), Gaps = 22/117 (18%)
Query: 86 VDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLN 145
+ + L+ L G + L +L +LD+ + SI L ++N
Sbjct: 81 YNPISGLSNLERLRIMGKDVTSDKIPNLS-GLTSLTLLDISHSAHDDSILTKINTLPKVN 139
Query: 146 VLYLSGNSLAGNVPA---------------------TLGELKKLSNLDLSRNLLTGE 181
+ LS N ++ + + KL+ L + G+
Sbjct: 140 SIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGGK 196
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 5e-23
Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 25/251 (9%)
Query: 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL 177
+ + + S L+ L L +S+ ++ + +L L+ L + N
Sbjct: 18 DNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSIT-DMTG-IEKLTGLTKLICTSNN 75
Query: 178 LTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNL 237
+T + +S NLT L SN T + + L+ + +LN N LT +V
Sbjct: 76 IT-TLD--LSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLTKL---DVSQN 126
Query: 238 DKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGN 297
L L+ ++N+++ +++ L +L N +++ QL +D S N
Sbjct: 127 PLLTYLNCARNTLT---EIDVSHNTQLTELDCHLNKK---ITKLDVTPQTQLTTLDCSFN 180
Query: 298 KLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSF 357
K+ L + L L+ NNIT L N N + S+N L +++ +
Sbjct: 181 KIT-ELDVSQN--KLLNRLNCDTNNITK----LDLNQNIQLTFLDCSSNKLT-EIDVTPL 232
Query: 358 RKFSLIDLSSN 368
+ + D S N
Sbjct: 233 TQLTYFDCSVN 243
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 3e-20
Identities = 48/302 (15%), Positives = 99/302 (32%), Gaps = 48/302 (15%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVL 147
+ + T L+ + I + L LD ++ + LN L
Sbjct: 143 DVSHNTQLTELDCHLNKK---ITKLDVTPQTQLTTLDCSFNKIT-ELD--VSQNKLLNRL 196
Query: 148 YLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIP 207
N++ + L + +L+ LD S N LT EI ++ L LT + + N T ++
Sbjct: 197 NCDTNNIT-KLD--LNQNIQLTFLDCSSNKLT-EID--VTPLTQLTYFDCSVNPLT-ELD 249
Query: 208 SGLYSLSSIQFLNLSDNALTGFIPS-------------------EVGNLDKLIELDLSKN 248
+LS + L+ L + +V + +L LD
Sbjct: 250 VS--TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAA 307
Query: 249 SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF 308
I+ L+L L L ++ +L+E +L+ + + +
Sbjct: 308 GIT---ELDLSQNPKLVYLYLNNT----ELTELDVSHNTKLKSLSCVNAHIQ-DFSSVGK 359
Query: 309 LRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNML--YGDLNSSSFRKFSLIDLS 366
+ P L + + + +S ++L +G+ + + D +
Sbjct: 360 I-PALNNNFEAEGQTIT---MPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDQA 415
Query: 367 SN 368
+N
Sbjct: 416 TN 417
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 5e-23
Identities = 52/256 (20%), Positives = 88/256 (34%), Gaps = 22/256 (8%)
Query: 82 PRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP-GSFGN 140
+ NL L ++G++ +I E L +L+ LDL LS ++ F
Sbjct: 68 SNSDLQRCVNLQALV-LTSNGIN---TIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKP 122
Query: 141 LSRLNVLYLSGNSLAGNVPATL-GELKKLSNLDLSRNLLTGEIP-NAISLLGNLTRLNLA 198
LS L L L GN +L L KL L + +I + L L L +
Sbjct: 123 LSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEID 182
Query: 199 SNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG----S 253
++ L S+ ++ L L + V + L+L +
Sbjct: 183 ASDLQ-SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSE 241
Query: 254 LP----LELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFL 309
L L + I++ L L + L ++ S N+L +P +F
Sbjct: 242 LSTGETNSLIKKFTFRNVKITDESL--FQVMKLLNQISGLLELEFSRNQLKS-VPDGIFD 298
Query: 310 R-PNLRFLDLSRNNIT 324
R +L+ + L N
Sbjct: 299 RLTSLQKIWLHTNPWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 5e-22
Identities = 58/309 (18%), Positives = 106/309 (34%), Gaps = 35/309 (11%)
Query: 92 LTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSG 151
L ++ S + S S+ + S SL+ SIP G + L LS
Sbjct: 11 LGVIISLSKEESSNQASL------SCDRNGICKGSSGSLN-SIPS--GLTEAVKSLDLSN 61
Query: 152 NSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY 211
N + + L L L L+ N + ++ S LG+L L+L+ N+ + + S +
Sbjct: 62 NRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWF 120
Query: 212 S-LSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLE-LRGLRNLAKLV 268
LSS+ FLNL N + + +L KL L + + + GL L +L
Sbjct: 121 KPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELE 180
Query: 269 ISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNITGSW 327
I + L+ ++ + + L + L ++ L+L ++
Sbjct: 181 IDASDLQ-SYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDL---- 234
Query: 328 PILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRG----RNVS 383
+ + N L F + ++ + +
Sbjct: 235 -----DTFHFSELSTGETNSLIKKFT------FRNVKITDESLFQVMKLLNQISGLLELE 283
Query: 384 LGRNCLQSV 392
RN L+SV
Sbjct: 284 FSRNQLKSV 292
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 5e-23
Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 13/250 (5%)
Query: 81 NPRFAVDSLGNLTLLSSFNASGLSLPG----SIPEWFGYRLPALQVLDLRSCSLSGSIPG 136
N + L T + F+ S + L G ++ G L AL + + S
Sbjct: 235 NSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSY 294
Query: 137 SFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196
+ S +N+ + + ++ +LD S NLLT + L L L
Sbjct: 295 IYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLI 354
Query: 197 LASNFFT--GQIPSGLYSLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSISGS 253
L N +I + S+Q L++S N+++ L+ L++S N ++ +
Sbjct: 355 LQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDT 414
Query: 254 LPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PN 312
+ L + L + N ++ + + + L+ LQ ++++ N+L ++P +F R +
Sbjct: 415 IFRCL--PPRIKVLDLHSNKIK-SIPKQVVK-LEALQELNVASNQL-KSVPDGIFDRLTS 469
Query: 313 LRFLDLSRNN 322
L+ + L N
Sbjct: 470 LQKIWLHTNP 479
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 91.8 bits (228), Expect = 1e-19
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 10/214 (4%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175
+ + + +S L S N L V G L +L L L
Sbjct: 298 IFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQM 357
Query: 176 NLLT--GEIPNAISLLGNLTRLNLASNFFTGQIPSGL-YSLSSIQFLNLSDNALTGFIPS 232
N L +I + + +L +L+++ N + G S+ LN+S N LT I
Sbjct: 358 NQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFR 417
Query: 233 EVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVV 292
+ ++ LDL N I S+P ++ L L +L ++ N L+ + +G+F L LQ +
Sbjct: 418 CL--PPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKI 473
Query: 293 DLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS 326
L N D + P +L R+L+ + GS
Sbjct: 474 WLHTNPWDCSCPRIDYLS---RWLNKNSQKEQGS 504
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 81.4 bits (201), Expect = 3e-16
Identities = 61/286 (21%), Positives = 110/286 (38%), Gaps = 28/286 (9%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+P + +L++ +S +LS+L +L +S N + +
Sbjct: 14 HVPKDLS-------QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFK 66
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYS-LSSIQFLNLS 222
++L LDLS N L +I NL L+L+ N F + +S ++FL LS
Sbjct: 67 FNQELEYLDLSHNKLV-KIS--CHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLS 123
Query: 223 DNALTGFIPSEVGNLDKL-IELDLSKNSISGSLPLELRGLRNLA-KLVISENGLEGQLSE 280
L + +L+ + L L + P L+ + +V N + +
Sbjct: 124 TTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILD 183
Query: 281 GLFPTLDQLQVVDLSG----NKLDGALPATLFLRPNLRFLDLSRNNITGSWP----ILST 332
T+ L++ ++ NK L L+ N + +L+ NNI +W IL
Sbjct: 184 VSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQL 243
Query: 333 NGNASGAVFNISNNMLYGDLNSSSF-------RKFSLIDLSSNYFQ 371
+ + F+ISN L G L+ F + S+ + S+ F
Sbjct: 244 VWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFG 289
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 79.5 bits (196), Expect = 1e-15
Identities = 42/255 (16%), Positives = 86/255 (33%), Gaps = 17/255 (6%)
Query: 87 DSLGNLTLLS-SFNASGLSLPGSIPEWFGYRLPALQVLDLR------SCSLSGSIPGSFG 139
+ L + S I + + L++ +++ CS SI
Sbjct: 158 EGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQ 217
Query: 140 NLSRLNVLYLSGNSLAGNVPATLGELKK--------LSNLDLSRNLLTGEIPNAISLLGN 191
+L+ L L+ N + +L +SN+ L L + + + L
Sbjct: 218 TNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKA 277
Query: 192 LTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSIS 251
L+ + S+ F S++ N + + + + LD S N ++
Sbjct: 278 LSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLT 337
Query: 252 GSLPLELRGLRNLAKLVISENGLEG-QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310
++ L L L++ N L+ + + LQ +D+S N +
Sbjct: 338 DTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSW 397
Query: 311 P-NLRFLDLSRNNIT 324
+L L++S N +T
Sbjct: 398 TKSLLSLNMSSNILT 412
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 8e-12
Identities = 46/254 (18%), Positives = 85/254 (33%), Gaps = 22/254 (8%)
Query: 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG 204
++ S N L +VP L +K + L++S+N ++ + I L L L ++ N
Sbjct: 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQY 59
Query: 205 QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPL--ELRGLR 262
S +++L+LS N L I L LDLS N+ +LP+ E +
Sbjct: 60 LDISVFKFNQELEYLDLSHNKLVK-ISC--HPTVNLKHLDLSFNAFD-ALPICKEFGNMS 115
Query: 263 NLAKLVISENGLEGQLSEGLFPTLDQLQVV----DLSGNKLDGALPATLFLRPNLRFLDL 318
L L +S L + + L + L + P L + L
Sbjct: 116 QLKFLGLSTT----HLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGL---QDFNTESL 168
Query: 319 SRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDR 378
T + + +N+ ++ S L+ +++
Sbjct: 169 HIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLS--ILAKLQTNPKLSNLT 226
Query: 379 GRNVSLGRNCLQSV 392
N+ N +
Sbjct: 227 LNNIETTWNSFIRI 240
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 97.9 bits (244), Expect = 1e-22
Identities = 56/220 (25%), Positives = 78/220 (35%), Gaps = 40/220 (18%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+LP +P +L L L + +RL L L L + G
Sbjct: 24 ALPPDLP-------KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQV-DG 74
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY-SLSSIQFLNLS 222
L L LDLS N L +P L LT L+++ N T +P G L +Q L L
Sbjct: 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLK 132
Query: 223 DNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEG 281
N L +P + KL +L L+ N+++ LP G
Sbjct: 133 GNELK-TLPPGLLTPTPKLEKLSLANNNLT-ELP------------------------AG 166
Query: 282 LFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRN 321
L L+ L + L N L +P F L F L N
Sbjct: 167 LLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 3e-22
Identities = 54/194 (27%), Positives = 81/194 (41%), Gaps = 17/194 (8%)
Query: 136 GSFGNLSRLNVLYLSGNSLA---GNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNL 192
++ + +L ++P + L LS NLL + L
Sbjct: 4 CEVSKVASHLEVNCDKRNLTALPPDLPKDT------TILHLSENLLYTFSLATLMPYTRL 57
Query: 193 TRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252
T+LNL T ++ +L + L+LS N L +P L L LD+S N ++
Sbjct: 58 TQLNLDRAELT-KLQVDG-TLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT- 113
Query: 253 SLPLEL-RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR- 310
SLPL RGL L +L + N L+ L GL +L+ + L+ N L LPA L
Sbjct: 114 SLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGL 171
Query: 311 PNLRFLDLSRNNIT 324
NL L L N++
Sbjct: 172 ENLDTLLLQENSLY 185
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 3e-06
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 9/97 (9%)
Query: 82 PRFAVDSLGNLTLLS-SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP-GSFG 139
P A+ LG L L N L ++P P L+ L L + +L+ +P G
Sbjct: 116 PLGALRGLGELQELYLKGNE--LK---TLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLN 169
Query: 140 NLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRN 176
L L+ L L NSL +P L L N
Sbjct: 170 GLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-22
Identities = 57/246 (23%), Positives = 100/246 (40%), Gaps = 31/246 (12%)
Query: 92 LTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSG 151
+ S + L+L S+P+ P + VL++ +L S+P +L L+
Sbjct: 58 INQFSELQLNRLNLS-SLPDNLP---PQITVLEITQNALI-SLPELPASLEYLD---ACD 109
Query: 152 NSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY 211
N L+ +P LK +LD+ N LT +P L L +N +N T +P
Sbjct: 110 NRLS-TLPELPASLK---HLDVDNNQLT-MLP---ELPALLEYINADNNQLT-MLPE--- 157
Query: 212 SLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAK----L 267
+S++ L++ +N LT F+P +L+ LD+S N + SLP + +
Sbjct: 158 LPTSLEVLSVRNNQLT-FLPELPESLE---ALDVSTNLLE-SLPAVPVRNHHSEETEIFF 212
Query: 268 VISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSW 327
EN + + E + +LD + L N L + +L + R + S
Sbjct: 213 RCRENRIT-HIPENIL-SLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSD 270
Query: 328 PILSTN 333
+T
Sbjct: 271 GQQNTL 276
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Query: 219 LNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP-LELRGLRNLAKLVISENGLEGQ 277
N N ++G DK + L + + ++ L+ + ++L ++ L
Sbjct: 15 QNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLS-S 73
Query: 278 LSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
L + L P Q+ V++++ N L +LP +L +LD N ++
Sbjct: 74 LPDNLPP---QITVLEITQNALI-SLPELP---ASLEYLDACDNRLS 113
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 50.4 bits (120), Expect = 1e-06
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 241 IELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLD 300
+ + N+ISG+ K + +S ++Q + L+ L
Sbjct: 13 LSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLS 72
Query: 301 GALPATLFLRPNLRFLDLSRNNIT 324
+LP L P + L++++N +
Sbjct: 73 -SLPDNLP--PQITVLEITQNALI 93
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 3e-04
Identities = 14/98 (14%), Positives = 27/98 (27%), Gaps = 2/98 (2%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
+ +L L SLP R ++ IP + +L
Sbjct: 177 ELPESLEALDVSTNLLESLPAVPVRNHHSEE-TEIFFRCRENRIT-HIPENILSLDPTCT 234
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPN 184
+ L N L+ + +L + + R +
Sbjct: 235 IILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQ 272
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 4e-22
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 24/160 (15%)
Query: 513 NFSETNLIKK---GHSGDLFKGTLAGGTTVVVKKV---SLHSFKKESYMMELDLFSRVSH 566
+ + N+ +K G G + + G+ V VK + H+ + ++ E+ + R+ H
Sbjct: 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 567 ARLVPLLGQCLEHE-----TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKI 621
+V +G + TE Y+ G L LH+ + + LD RL +
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTE------YLSRGSLYRLLHK-----SGAREQLDERRRLSM 142
Query: 622 AIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
A A+G++YLH+ NPP+VHR++++ ++L+D K+ V++
Sbjct: 143 AYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVC 181
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 4e-22
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 513 NFSETNLIKK---GHSGDLFKGTLAG-GTTVVVKKVSLHSFKKESYMM--------ELDL 560
+E K+ G G + KG L + V +K + L + E+ M+ E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 561 FSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLK 620
S ++H +V L G +V +++ CGDL L D + W +L+
Sbjct: 77 MSNLNHPNIVKLYGLMHN---PPRMVMEFVPCGDLYHRLL-------DKAHPIKWSVKLR 126
Query: 621 IAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657
+ + A G+ Y+ + NPP+VHRD+++ +I L E
Sbjct: 127 LMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDE 162
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 96.4 bits (240), Expect = 3e-21
Identities = 63/283 (22%), Positives = 92/283 (32%), Gaps = 41/283 (14%)
Query: 74 RTRIGRLNPRFAVDSLGNLTLLS-SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSG 132
I LN + L +L L GL + F L +L +L L
Sbjct: 39 LNSIAELNET-SFSRLQDLQFLKVEQQTPGLVIR---NNTFR-GLSSLIILKLDYNQFL- 92
Query: 133 SIP-GSFGNLSRLNVLYLSGNSLAGNV--PATLGELKKLSNLDLSRNLLTGEIPNAI-SL 188
+ G+F L+ L VL L+ +L G V L L L L N + P +
Sbjct: 93 QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLN 152
Query: 189 LGNLTRLNLASNFFTGQIPSG-LYSLSSIQF--LNLSDNALT-----GFIPSEVGNLDKL 240
+ L+L N I L + F L LS L + GN K
Sbjct: 153 MRRFHVLDLTFNKVK-SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKN 211
Query: 241 I---ELDLSKNSISGSLPLELRGLRNLAKL-------------VISENGLEGQLSEGLFP 284
LDLS N S+ K+ + F
Sbjct: 212 TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFK-DPDNFTFK 270
Query: 285 TLD--QLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNIT 324
L+ ++ DLS +K+ AL ++F +L L L++N I
Sbjct: 271 GLEASGVKTCDLSKSKI-FALLKSVFSHFTDLEQLTLAQNEIN 312
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 7e-21
Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 26/260 (10%)
Query: 76 RIGRLNPRFAVDSLGNLTLLS-SFN-------ASGLSLPGSIPEWFGYRLPALQVLDLRS 127
I ++ P ++ +L +FN L+ G RL ++ + D+
Sbjct: 140 NIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLL--RLSSITLQDMNE 197
Query: 128 CSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAIS 187
L G+ + + L LSGN ++ + + + ++L+ N S
Sbjct: 198 YWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKI---QSLILSNSYNMGS 254
Query: 188 LLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLS 246
G+ + + F G SG+ + +LS + + + V + L +L L+
Sbjct: 255 SFGHTNFKDPDNFTFKGLEASGV------KTCDLSKSKIF-ALLKSVFSHFTDLEQLTLA 307
Query: 247 KNSISGSLPLE-LRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPA 305
+N I+ + GL +L KL +S+N L G + +F LD+L+V+DLS N + AL
Sbjct: 308 QNEIN-KIDDNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHI-RALGD 364
Query: 306 TLFLR-PNLRFLDLSRNNIT 324
FL PNL+ L L N +
Sbjct: 365 QSFLGLPNLKELALDTNQLK 384
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 1e-20
Identities = 54/289 (18%), Positives = 98/289 (33%), Gaps = 29/289 (10%)
Query: 108 SIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPA-TLGELK 166
+P + +DL S++ SF L L L + + + T L
Sbjct: 27 ELPAH-------VNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLS 79
Query: 167 KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG-QIPSGLYS-LSSIQFLNLSDN 224
L L L N A + L NL L L G + + L+S++ L L DN
Sbjct: 80 SLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDN 139
Query: 225 ALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLF 283
+ P+ N+ + LDL+ N + +L + ++
Sbjct: 140 NIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLR------------- 186
Query: 284 PTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNI 343
L + + D++ L F ++ LDLS N S + A + ++
Sbjct: 187 --LSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSL 244
Query: 344 SNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRGRNVSLGRNCLQSV 392
+ Y +S F D + F+G A + L ++ + ++
Sbjct: 245 ILSNSYNMGSSFGHTNFK--DPDNFTFKGLEASGV-KTCDLSKSKIFAL 290
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 86.0 bits (213), Expect = 8e-18
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 28/233 (12%)
Query: 91 NLTLLSSFNASGLSLPGSIPEWFG----YRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
+ TLL + + + W ++ ++ LDL S+ F +
Sbjct: 181 HFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTK 240
Query: 147 LYLSGNSLAGNVPATLG---------------ELKKLSNLDLSRNLLTGEIPNAI-SLLG 190
+ S + N+ ++ G E + DLS++ + + ++ S
Sbjct: 241 IQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFT 299
Query: 191 NLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKN 248
+L +L LA N +I + L+ + LNLS N L I S + NLDKL LDLS N
Sbjct: 300 DLEQLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQNFLGS-IDSRMFENLDKLEVLDLSYN 357
Query: 249 SISGSLPLEL-RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLD 300
I +L + GL NL +L + N L+ + +G+F L LQ + L N D
Sbjct: 358 HIR-ALGDQSFLGLPNLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWD 408
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 1e-05
Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 8/92 (8%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP-GSFGNLSRLN 145
L +L L+ S+ + F L L+VLDL + ++ SF L L
Sbjct: 320 WGLTHLLKLNLSQNFLGSIDSRM---F-ENLDKLEVLDLSYNHIR-ALGDQSFLGLPNLK 374
Query: 146 VLYLSGNSLAGNVPA-TLGELKKLSNLDLSRN 176
L L N L +VP L L + L N
Sbjct: 375 ELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN 405
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 3e-21
Identities = 56/286 (19%), Positives = 101/286 (35%), Gaps = 49/286 (17%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGN---SLAGNVPATLGELKKLSNLD 172
+L+ S++ ++ L+ ++ + + + S+ G + L ++ L
Sbjct: 22 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQG-----IQYLPNVTKLF 74
Query: 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIP--SGLYSLSSIQFLNLSDNALTGFI 230
L+ N LT +I ++ L NL L L N ++ S L L ++ L+L N ++
Sbjct: 75 LNGNKLT-DIKP-LANLKNLGWLFLDEN----KVKDLSSLKDLKKLKSLSLEHNGISDIN 128
Query: 231 PSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQ 290
+ +L +L L L N I+ L L L L + +N + + L +LQ
Sbjct: 129 G--LVHLPQLESLYLGNNKITDITVLS--RLTKLDTLSLEDNQIS-DIVP--LAGLTKLQ 181
Query: 291 VVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG----------SWPILSTNGNASGAV 340
+ LS N + L NL L+L + +
Sbjct: 182 NLYLSKNHISDLRA--LAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTP 239
Query: 341 FNISNNMLYGDLN------------SSSFRKFSLIDLSSNYFQGTV 374
IS++ Y N S F + I + F G V
Sbjct: 240 EIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRV 285
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 2e-16
Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 15/164 (9%)
Query: 162 LGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNL 221
+ +L + +T + + L ++ ++ ++ + G+ L ++ L L
Sbjct: 20 DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SV-QGIQYLPNVTKLFL 75
Query: 222 SDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEG 281
+ N LT + NL L L L +N + L+ L+ L L + NG+ ++
Sbjct: 76 NGNKLTDI--KPLANLKNLGWLFLDENKVKDLSSLK--DLKKLKSLSLEHNGIS-DING- 129
Query: 282 LFPTLDQLQVVDLSGNKLDGALP-ATLFLRPNLRFLDLSRNNIT 324
L QL+ + L NK+ + L L L L N I+
Sbjct: 130 -LVHLPQLESLYLGNNKITDITVLSRL---TKLDTLSLEDNQIS 169
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 5e-08
Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 11/118 (9%)
Query: 208 SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKL 267
+ + NL ++T + L+ + ++ + + I ++ L N+ KL
Sbjct: 18 FSDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQGIQ--YLPNVTKL 73
Query: 268 VISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALP-ATLFLRPNLRFLDLSRNNIT 324
++ N L + L L + L NK+ L L+ L L N I+
Sbjct: 74 FLNGNKLT-DIKP--LANLKNLGWLFLDENKVKDLSSLKDL---KKLKSLSLEHNGIS 125
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 4e-21
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 19/153 (12%)
Query: 513 NFSETNLIKK---GHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMM-----ELDLFSRV 564
+F+E L + G G +++ G V VK + S + E LF+ +
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 565 SHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIG 624
H ++ L G CL+ LV ++ G L L + + + A+
Sbjct: 64 KHPNIIALRGVCLKEPN-LCLVMEFARGGPLNRVLSG---------KRIPPDILVNWAVQ 113
Query: 625 AAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657
A G++YLH E P++HRD+++S+IL+ K E
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVE 146
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 5e-21
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATL- 162
++P +IP + LDL+S LS +F L++L +LYL+ N L +PA +
Sbjct: 30 AIPSNIP-------ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIF 81
Query: 163 GELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY-SLSSIQFLNL 221
ELK L L ++ N L L NL L L N +P ++ SL+ + +L+L
Sbjct: 82 KELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSL 140
Query: 222 SDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLEL-RGLRNLAKLVISENGLEGQLS 279
N L +P V L L EL L N + +P L L L + N L+ ++
Sbjct: 141 GYNELQ-SLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLK-RVP 197
Query: 280 EGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310
EG F +L++L+++ L N D +++
Sbjct: 198 EGAFDSLEKLKMLQLQENPWDCTCNGIIYMA 228
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 6e-18
Identities = 53/180 (29%), Positives = 77/180 (42%), Gaps = 9/180 (5%)
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
L L N L+ L KL L L+ N L L NL L + N
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQ-A 99
Query: 206 IPSGLY-SLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLEL-RGLR 262
+P G++ L ++ L L N L +P V +L KL L L N + SLP + L
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLT 157
Query: 263 NLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRN 321
+L +L + N L+ ++ EG F L +L+ + L N+L +P F L+ L L N
Sbjct: 158 SLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 3e-17
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 167 KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY-SLSSIQFLNLSDNA 225
+++D S LT IP+ I + +L+L SN + +PS + L+ ++ L L+DN
Sbjct: 17 NKNSVDCSSKKLT-AIPSNIPA--DTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNK 72
Query: 226 LTGFIPSEV-GNLDKLIELDLSKNSISGSLPLEL-RGLRNLAKLVISENGLEGQLSEGLF 283
L +P+ + L L L ++ N + +LP+ + L NLA+L + N L+ L +F
Sbjct: 73 LQ-TLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLK-SLPPRVF 129
Query: 284 PTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNIT 324
+L +L + L N+L +LP +F + +L+ L L N +
Sbjct: 130 DSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLK 170
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 7e-13
Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP-GSFGNLSRLN 145
L NL L + +LP + + +L L L L L S+P F +L++L
Sbjct: 82 KELKNLETLWVTDNKLQALPIGVFD----QLVNLAELRLDRNQLK-SLPPRVFDSLTKLT 136
Query: 146 VLYLSGNSLAGNVPATL-GELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG 204
L L N L ++P + +L L L L N L A L L L L +N
Sbjct: 137 YLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK- 194
Query: 205 QIPSGLY-SLSSIQFLNLSDN 224
++P G + SL ++ L L +N
Sbjct: 195 RVPEGAFDSLEKLKMLQLQEN 215
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 2e-20
Identities = 44/224 (19%), Positives = 74/224 (33%), Gaps = 16/224 (7%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPA-TL 162
+P +P L L G+F L + +S N + + A
Sbjct: 23 EIPSDLPRN-------AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVF 75
Query: 163 GELKKLSNLDLSR-NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY-SLSSIQFLN 220
L KL + + + N L P A L NL L +++ +P L+
Sbjct: 76 SNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLD 134
Query: 221 LSDNALTGFIPSEV--GNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278
+ DN I G + + L L+KN I G + + N LE +L
Sbjct: 135 IQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLE-EL 193
Query: 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRN 321
+F ++D+S ++ +LP+ LR
Sbjct: 194 PNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNL 236
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 1e-14
Identities = 36/182 (19%), Positives = 64/182 (35%), Gaps = 9/182 (4%)
Query: 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG 204
V + + +P+ L + L L A S G+L ++ ++ N
Sbjct: 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE 68
Query: 205 QIPSG-LYSLSSIQFLNLSD-NALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLELRGL 261
I + +L + + + N L +I E NL L L +S I +
Sbjct: 69 VIEADVFSNLPKLHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHS 127
Query: 262 RNLAKLVISENGLEGQLSEGLFPTL-DQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSR 320
L I +N + F L + ++ L+ N + + + F L L+LS
Sbjct: 128 LQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSD 186
Query: 321 NN 322
NN
Sbjct: 187 NN 188
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 1e-14
Identities = 34/194 (17%), Positives = 64/194 (32%), Gaps = 15/194 (7%)
Query: 82 PRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP-GSFGN 140
+L L + A+ L I LP LQ L + + + +P +
Sbjct: 71 EADVFSNLPKLHEIRIEKANNLL---YINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIH 126
Query: 141 LSRLNVLYLSGNSLAGNVPATL--GELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198
+ +L + N + G + L L++N + +A +
Sbjct: 127 SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSD 186
Query: 199 SNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPL 256
+N ++P+ + S L++S + +PS NL KL LP
Sbjct: 187 NNNLE-ELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNLK---KLPT 241
Query: 257 ELRGLRNLAKLVIS 270
L L L + ++
Sbjct: 242 -LEKLVALMEASLT 254
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 3e-12
Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 8/135 (5%)
Query: 191 NLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250
+ + T +IPS L + L L L ++++S+N +
Sbjct: 10 SNRVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 66
Query: 251 SGSLPLE-LRGLRNLAKLVISE-NGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF 308
+ + L L ++ I + N L ++ F L LQ + +S + LP
Sbjct: 67 LEVIEADVFSNLPKLHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGI-KHLPDVHK 124
Query: 309 LR-PNLRFLDLSRNN 322
+ LD+ N
Sbjct: 125 IHSLQKVLLDIQDNI 139
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 6e-09
Identities = 32/158 (20%), Positives = 62/158 (39%), Gaps = 9/158 (5%)
Query: 219 LNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278
++ +T IPS++ IEL + G +L K+ IS+N + +
Sbjct: 14 FLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI 70
Query: 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNITGSWPILSTNGNAS 337
+F L +L + + + F PNL++L +S I P + +
Sbjct: 71 EADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQ 129
Query: 338 GAVFNISNNMLYGDLNSSSFRKFS----LIDLSSNYFQ 371
+ +I +N+ + +SF S ++ L+ N Q
Sbjct: 130 KVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 93.4 bits (232), Expect = 5e-20
Identities = 45/303 (14%), Positives = 104/303 (34%), Gaps = 16/303 (5%)
Query: 29 ALLDLRSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDS 88
+ + + L+ + L E C+ + + + + +
Sbjct: 213 VNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTW-KCSVKLFQ 271
Query: 89 LGNLTLLSSFNASGLSLPGSI----PEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRL 144
+ N L++ I + L +L + +++ S + + +
Sbjct: 272 FFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEM 331
Query: 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG 204
N+ LS + + L+ ++N+ T + S L L L L N
Sbjct: 332 NIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK- 390
Query: 205 QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNL----DKLIELDLSKNSISGSLPLELRG 260
++ L D +L + ++ L+LS N ++GS+ L
Sbjct: 391 NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL-- 448
Query: 261 LRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLS 319
+ L + N + + + + L LQ ++++ N+L ++P +F R +L+++ L
Sbjct: 449 PPKVKVLDLHNNRIM-SIPKDVTH-LQALQELNVASNQL-KSVPDGVFDRLTSLQYIWLH 505
Query: 320 RNN 322
N
Sbjct: 506 DNP 508
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 82.2 bits (203), Expect = 2e-16
Identities = 48/227 (21%), Positives = 79/227 (34%), Gaps = 35/227 (15%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
+ + + + P + L+ + S+ L RL
Sbjct: 326 SVFAEMNIKMLSISDTPFIHMVCPPS----PSSFTFLNFTQNVFTDSVFQGCSTLKRLQT 381
Query: 147 LYLSGNSLA--GNVPATLGELKKLSNLDLSRNLLT-GEIPNAISLLGNLTRLNLASNFFT 203
L L N L V + L LD+S N L + ++ LNL+SN T
Sbjct: 382 LILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLT 441
Query: 204 GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRN 263
G + L ++ L+L +N + IP +V +L L EL+++ N + S+P
Sbjct: 442 GSVFRCL--PPKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLK-SVP-------- 489
Query: 264 LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310
+G+F L LQ + L N D P +L
Sbjct: 490 ----------------DGVFDRLTSLQYIWLHDNPWDCTCPGIRYLS 520
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 79.1 bits (195), Expect = 2e-15
Identities = 51/254 (20%), Positives = 88/254 (34%), Gaps = 20/254 (7%)
Query: 85 AVDSLGNLTLLS-SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSR 143
+V++LG+L L + N + L V + F
Sbjct: 216 SVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWP 275
Query: 144 LNVLYLS--GNSLAGNVP-----ATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196
V YL+ ++ + + LK L + + S+ +
Sbjct: 276 RPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKM 335
Query: 197 LASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255
L+ + T I S SS FLN + N T + L +L L L +N + +
Sbjct: 336 LSISD-TPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFF 393
Query: 256 ---LELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF--LR 310
L + + +L L +S N L + + + V++LS N L ++F L
Sbjct: 394 KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNML----TGSVFRCLP 449
Query: 311 PNLRFLDLSRNNIT 324
P ++ LDL N I
Sbjct: 450 PKVKVLDLHNNRIM 463
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 74.5 bits (183), Expect = 5e-14
Identities = 60/285 (21%), Positives = 95/285 (33%), Gaps = 28/285 (9%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+P +P P + L L S+S LS L VL LS N +
Sbjct: 45 HVPKDLP-------PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFL 97
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY--SLSSIQFLNL 221
+ L LD+S N L I + +L L+L+ N F +P +L+ + FL L
Sbjct: 98 FNQDLEYLDVSHNRLQ-NIS--CCPMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGL 153
Query: 222 SDNALTGFIPSEVGNLD-KLIELDLSKNSISGSLPLELRGL-RNLAKLVISENGLEGQLS 279
S V +L I LDL I G L+ + LV N L
Sbjct: 154 SAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQV 213
Query: 280 EGLFPTLDQLQVVDLSGNKLDGALPATLF--LRPNLRFLDLSRNNITGSWP----ILSTN 333
L LQ+ ++ N + T L L+++ +I +W +
Sbjct: 214 NMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF 273
Query: 334 GNASGAVFNISNNMLYGDLNSSSF-------RKFSLIDLSSNYFQ 371
NI N + ++ F + + + + F
Sbjct: 274 WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFL 318
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 1e-12
Identities = 51/324 (15%), Positives = 106/324 (32%), Gaps = 32/324 (9%)
Query: 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201
+++ S +L +VP L + L LS+N ++ IS L L L L+ N
Sbjct: 31 ELESMVDYSNRNLT-HVPKDL--PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNR 87
Query: 202 FTGQIPSGLY-SLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPL--EL 258
+ ++ +++L++S N L I + L LDLS N LP+ E
Sbjct: 88 IR-SLDFHVFLFNQDLEYLDVSHNRLQN-ISC--CPMASLRHLDLSFNDFD-VLPVCKEF 142
Query: 259 RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR---PNLRF 315
L L L +S + + + L + + + + + PN
Sbjct: 143 GNLTKLTFLGLSAA----KFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTV 198
Query: 316 LDLSRNNITGSWPILSTNGNASGAV------FNISNNMLYGDLNSSSFRKFSLIDLSSNY 369
L L + + ++ + NA G + N N S R +L++++ +
Sbjct: 199 LHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQH 258
Query: 370 FQGTVADDRGRNVSLGRNCLQSVASQRSSEDCRLFYAERGLTFDNFGVLEPMQPPVPQHE 429
+ T ++ + + + + E
Sbjct: 259 IETTWKCSVKLFQFFWPRPVEYL----NIYNLTI----TERIDREEFTYSETALKSLMIE 310
Query: 430 EKSSKRWIFILVGVFGGLGFIAIL 453
++ ++F ++ + I
Sbjct: 311 HVKNQVFLFSKEALYSVFAEMNIK 334
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 66.0 bits (161), Expect = 2e-11
Identities = 51/272 (18%), Positives = 90/272 (33%), Gaps = 25/272 (9%)
Query: 116 RLPALQVLDLRSCSLSGSIP-GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLS 174
L L+VL L + S+ F L L +S N L N+ + L +LDLS
Sbjct: 74 FLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSHNRLQ-NISC--CPMASLRHLDLS 129
Query: 175 RNLLTGEIPNA--ISLLGNLTRLNLASNFFTGQIPSGLYSLS-SIQFLNLSDNALTGFIP 231
N +P L LT L L++ F + L S L+L + G
Sbjct: 130 FNDFD-VLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGET 188
Query: 232 SEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE----GQLSEGLFPTLD 287
+ L L + S + L L +S L +L L
Sbjct: 189 ESLQIP-NTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTR 247
Query: 288 QLQVVDLSGNKLDGALPAT-----LFLRPNLRFLDLSRNNITGSW----PILSTNGNASG 338
+++++ ++ + F + +L++ IT S S
Sbjct: 248 GPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSL 307
Query: 339 AVFNISNNMLYGDLNS--SSFRKFSLIDLSSN 368
+ ++ N + + S F + ++ LS +
Sbjct: 308 MIEHVKNQVFLFSKEALYSVFAEMNIKMLSIS 339
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 1e-08
Identities = 47/284 (16%), Positives = 89/284 (31%), Gaps = 52/284 (18%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP--GSFGNLSRL 144
+L L + ++ + +L+ LDL +P FGNL++L
Sbjct: 97 LFNQDLEYLDVSHNRLQNIS------CC-PMASLRHLDLSFNDFD-VLPVCKEFGNLTKL 148
Query: 145 NVLYLSGNSLAGNVPATLGELKKLSN-LDLSRNLLTGEIPNAISLLGNLTRLNLASN--- 200
L LS + L LDL + G ++ + N T L+L +
Sbjct: 149 TFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIP-NTTVLHLVFHPNS 207
Query: 201 FFTGQIPSGLYSLSSIQFLNLSDNA------------------LTGFIPSEVGNLDKLI- 241
F+ Q+ + +L +Q N+ N L + K
Sbjct: 208 LFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSV 267
Query: 242 ------------ELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQ----LSEGLFPT 285
L++ +I+ + E A + ++ Q E L+
Sbjct: 268 KLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSV 327
Query: 286 LDQLQVVDLSGNKLDGALPATLFLRP-NLRFLDLSRNNITGSWP 328
++ + LS + + P + FL+ ++N T S
Sbjct: 328 FAEMNIKMLSISDT-PFIHMVCPPSPSSFTFLNFTQNVFTDSVF 370
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 91.0 bits (226), Expect = 6e-20
Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 24/168 (14%)
Query: 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLF--SRVSHARLVPLLGQ 575
I KG G++++G G V VK S ++ S+ E +++ + H ++ +
Sbjct: 48 ESIGKGRFGEVWRGKW-RGEEVAVKI--FSSREERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 576 CLEH---ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL 632
+ T+ LV Y G L L+R ++ +K+A+ A GL++L
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNR---------YTVTVEGMIKLALSTASGLAHL 155
Query: 633 HHE-----CNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSH 673
H E P + HRD+++ +IL+ + L+ H
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 203
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 6e-20
Identities = 56/259 (21%), Positives = 92/259 (35%), Gaps = 42/259 (16%)
Query: 140 NLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199
L+ L S+ V EL + N + + + + + NL L+L+
Sbjct: 17 GLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQ-SLAG-MQFFTNLKELHLSH 72
Query: 200 NFFTGQIP--SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLE 257
N QI S L L+ ++ L+++ N L L L L N + + L
Sbjct: 73 N----QISDLSPLKDLTKLEELSVNRNRLKNL---NGIPSACLSRLFLDNNELRDTDSLI 125
Query: 258 LRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLD 317
L+NL L I N L+ + L +L+V+DL GN++ L + ++D
Sbjct: 126 --HLKNLEILSIRNNKLK-SIVM--LGFLSKLEVLDLHGNEITNTGG--LTRLKKVNWID 178
Query: 318 LSRNNITGSWP-------ILSTNGNASGAVF---NISNNMLYGDLN------------SS 355
L+ I +T + G ISN Y D S
Sbjct: 179 LTGQKCVNEPVKYQPELYITNTVKDPDGRWISPYYISNGGSYVDGCVLWELPVYTDEVSY 238
Query: 356 SFRKFSLIDLSSNYFQGTV 374
F ++ + + F GTV
Sbjct: 239 KFSEYINVGETEAIFDGTV 257
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 2e-12
Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 18/168 (10%)
Query: 86 VDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLN 145
+ S L+ + +FN ++ S+ L+ L L +S + +L++L
Sbjct: 34 LVSQKELSGVQNFNGDNSNI-QSLAGMQF--FTNLKELHLSHNQIS-DLSP-LKDLTKLE 88
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
L ++ N L LS L L N L + + + L NL L++ +N +
Sbjct: 89 ELSVNRNRLKNLNG---IPSACLSRLFLDNNELR-DTDS-LIHLKNLEILSIRNN----K 139
Query: 206 IP--SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSIS 251
+ L LS ++ L+L N +T + L K+ +DL+
Sbjct: 140 LKSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 10/117 (8%)
Query: 208 SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKL 267
L++ NL ++T + L + + ++I SL ++ NL +L
Sbjct: 13 FPDPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKEL 68
Query: 268 VISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
+S N + LS L +L+ + ++ N+L L L L N +
Sbjct: 69 HLSHNQIS-DLSP--LKDLTKLEELSVNRNRLKNLNGIPS---ACLSRLFLDNNELR 119
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 1e-19
Identities = 40/213 (18%), Positives = 77/213 (36%), Gaps = 15/213 (7%)
Query: 120 LQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLT 179
+ + + IP L L L L +S + +S ++
Sbjct: 13 EEDFRVTCKDIQ-RIPS---LPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTL 68
Query: 180 GEIP-NAISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSE--VG 235
++ ++ L +T + + + I L L ++FL + + L P V
Sbjct: 69 QQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPDLTKVY 127
Query: 236 NLDKLIELDLSKNSISGSLPLE-LRGLRN-LAKLVISENGLEGQLSEGLFPTLDQLQVVD 293
+ D L+++ N S+P+ +GL N L + NG + F +L V
Sbjct: 128 STDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGT-KLDAVY 185
Query: 294 LSGNKLDGALPATLF--LRPNLRFLDLSRNNIT 324
L+ NK + F + LD+S+ ++T
Sbjct: 186 LNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 2e-16
Identities = 47/237 (19%), Positives = 88/237 (37%), Gaps = 25/237 (10%)
Query: 51 CRSWRGVQCQNGQVIAI-NISG------FKRTRIGRLNPRFAVDSLGNLTLLS-SFNASG 102
C + + I ++ T + + P A +L N++ + S + +
Sbjct: 10 CHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTI-PSHAFSNLPNISRIYVSIDVTL 68
Query: 103 LSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP-GSFGNLSRLNVLYLSGNSLAGNVPAT 161
L F Y L + +++R+ I + L L L + L P
Sbjct: 69 QQLE---SHSF-YNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPDL 123
Query: 162 --LGELKKLSNLDLSRNLLTGEIP-NAISLLGNLTR-LNLASNFFTGQIPSGLYSLSSIQ 217
+ L+++ N IP NA L N T L L +N FT + ++ + +
Sbjct: 124 TKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLD 182
Query: 218 FLNLSDNALTGFIPSEV--GNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISEN 272
+ L+ N I + G LD+S+ S++ +LP + GL +L +L+
Sbjct: 183 AVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--GLEHLKELIARNT 236
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 4e-09
Identities = 22/163 (13%), Positives = 54/163 (33%), Gaps = 9/163 (5%)
Query: 214 SSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENG 273
+ ++ + IPS L L + + L N++++ +S +
Sbjct: 11 HQEEDFRVTCKDIQ-RIPS---LPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDV 66
Query: 274 LEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNITGSWPILST 332
QL F L ++ +++ + + P L+FL + + +
Sbjct: 67 TLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKV 126
Query: 333 NGNASGAVFNISNNMLYGDLNSSSFRKFS----LIDLSSNYFQ 371
+ I++N + ++F+ + L +N F
Sbjct: 127 YSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 3e-19
Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 26/172 (15%)
Query: 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLH---SFKKESYMMELDLFSRVSHARLVPLLG 574
+ KG G++++G+ G V VK S S+ +E+ + + H ++ +
Sbjct: 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNT---VMLRHENILGFIA 69
Query: 575 QCL---EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
+ T+ L+ Y G L L +LD ++ L+I + A GL++
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQL---------TTLDTVSCLRIVLSIASGLAH 120
Query: 632 LHHE-----CNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNV 676
LH E P + HRD+++ +IL+ + + L+ +H+Q + +V
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 172
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 1e-18
Identities = 35/172 (20%), Positives = 67/172 (38%), Gaps = 26/172 (15%)
Query: 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLH---SFKKESYMMELDLFSRVSHARLVPLLG 574
I KG G+++ G G V VK S+ +E+ + + + H ++ +
Sbjct: 43 KQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQT---VLMRHENILGFIA 98
Query: 575 QCLE---HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
++ T+ L+ Y G L L +LD + LK+A + GL +
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKS---------TTLDAKSMLKLAYSSVSGLCH 149
Query: 632 LHHE-----CNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNV 676
LH E P + HRD+++ +IL+ + L+ + ++
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDI 201
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 9e-18
Identities = 33/151 (21%), Positives = 56/151 (37%), Gaps = 33/151 (21%)
Query: 520 IKKGHSGDLFKGTLAGGTTVVVKKV-------SLHSFKKESYMMELDLFSRVSHARLVPL 572
+ KG G K T V+V K + +F KE +M + H ++
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVM-----RCLEHPNVLKF 72
Query: 573 LGQCLEHE-----TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE 627
+G + + TE Y+ G L + W R+ A A
Sbjct: 73 IGVLYKDKRLNFITE------YIKGGTLRGIIK-------SMDSQYPWSQRVSFAKDIAS 119
Query: 628 GLSYLHHECNPPLVHRDVQASSILLDDKFEV 658
G++YL H N ++HRD+ + + L+ + V
Sbjct: 120 GMAYL-HSMN--IIHRDLNSHNCLVRENKNV 147
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 84.5 bits (209), Expect = 1e-17
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 171 LDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSG--LYSLSSIQFLNLSDNALTG 228
L S+ L +P ++ L+L+ N + ++ + L+++ L LS N L
Sbjct: 23 LSCSKQQLP-NVPQSLPS--YTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLN- 77
Query: 229 FIPSEV-GNLDKLIELDLSKNSISGSLPLE-LRGLRNLAKLVISENGLEGQLSEGLFPTL 286
FI SE + L LDLS N + +L L+ L L++ N + + F +
Sbjct: 78 FISSEAFVPVPNLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDM 135
Query: 287 DQLQVVDLSGNKLDGALPATLFLR----PNLRFLDLSRNNIT 324
QLQ + LS N++ P L P L LDLS N +
Sbjct: 136 AQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK 176
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 2e-17
Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 7/142 (4%)
Query: 110 PEWFGYRLPALQVLDLRSCSLSGSIP-GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKL 168
EW RL L L L L+ I +F + L L LS N L +L+ L
Sbjct: 56 AEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQAL 114
Query: 169 SNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSG----LYSLSSIQFLNLSDN 224
L L N + NA + L +L L+ N + + P L + L+LS N
Sbjct: 115 EVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSN 173
Query: 225 ALTGFIPSEVGNLDKLIELDLS 246
L +++ L ++ L
Sbjct: 174 KLKKLPLTDLQKLPAWVKNGLY 195
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 73.0 bits (179), Expect = 6e-14
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 13/161 (8%)
Query: 170 NLDLSRNLLTGEIPNAISL--LGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNAL 226
LDLS N L+ + + L NL L L+ N I S + ++++L+LS N L
Sbjct: 43 LLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHL 100
Query: 227 TGFIPSEV-GNLDKLIELDLSKNSISGSLPLE-LRGLRNLAKLVISENGLEGQLSEGLF- 283
+ + +L L L L N I + + L KL +S+N + + L
Sbjct: 101 H-TLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIK 157
Query: 284 --PTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNN 322
L +L ++DLS NKL L P L +N
Sbjct: 158 DGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 5e-08
Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 29/152 (19%)
Query: 76 RIGRLNPRFAVDSLGNLTLLS-SFNA---------SGLS------LPG----SIPEWFGY 115
+ RL + L NL L S N + L ++ E+
Sbjct: 50 NLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFS 109
Query: 116 RLPALQVLDLRSCSLSGSIP-GSFGNLSRLNVLYLSGNSLAGNVPA----TLGELKKLSN 170
L AL+VL L + + + +F ++++L LYLS N ++ P +L KL
Sbjct: 110 DLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLML 167
Query: 171 LDLSRNLLTGEIPNAISLLGNLTR--LNLASN 200
LDLS N L + L + L L +N
Sbjct: 168 LDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 81.7 bits (201), Expect = 2e-16
Identities = 45/202 (22%), Positives = 72/202 (35%), Gaps = 18/202 (8%)
Query: 133 SIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNL 192
S + L S L P L + L + + L E + L
Sbjct: 353 RCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYE-KETLQYFSTL 411
Query: 193 TRLN--------LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELD 244
++ + F + + ++ L+L+ LT + + L + LD
Sbjct: 412 KAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT--VLCHLEQLLLVTHLD 469
Query: 245 LSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALP 304
LS N + +LP L LR L L S+N LE + L +LQ + L N+L
Sbjct: 470 LSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG--VANLPRLQELLLCNNRLQQ-SA 524
Query: 305 ATLFLR--PNLRFLDLSRNNIT 324
A L P L L+L N++
Sbjct: 525 AIQPLVSCPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 79.4 bits (195), Expect = 1e-15
Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 15/155 (9%)
Query: 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFF 202
R L + E + L L+ LT + + + L +T L+L+ N
Sbjct: 418 RAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT-VLCH-LEQLLLVTHLDLSHNRL 475
Query: 203 TGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP--LELRG 260
+P L +L ++ L SDNAL V NL +L EL L N + L
Sbjct: 476 R-ALPPALAALRCLEVLQASDNALENV--DGVANLPRLQELLLCNNRLQ-QSAAIQPLVS 531
Query: 261 LRNLAKLVISEN------GLEGQLSEGLFPTLDQL 289
L L + N G++ +L+E + P++ +
Sbjct: 532 CPRLVLLNLQGNSLCQEEGIQERLAE-MLPSVSSI 565
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 60.2 bits (145), Expect = 1e-09
Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 10/89 (11%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGN---SLAGNVPATLGELKKLSNLD 172
+L + LDL L ++P + L L VL S N ++ G + L +L L
Sbjct: 461 QLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENVDG-----VANLPRLQELL 514
Query: 173 LSRNLLTG-EIPNAISLLGNLTRLNLASN 200
L N L + L LNL N
Sbjct: 515 LCNNRLQQSAAIQPLVSCPRLVLLNLQGN 543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 5e-05
Identities = 34/212 (16%), Positives = 64/212 (30%), Gaps = 33/212 (15%)
Query: 157 NVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSI 216
++L +LS T + + + L L + + I + + ++
Sbjct: 340 CWCRDSATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTI---ILLMRAL 395
Query: 217 QFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276
L L L +D P+ L +L + EN +
Sbjct: 396 DPLLYEKETLQ--------YFSTLKAVD----------PMRAAYLDDLRSKFLLENSVLK 437
Query: 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNA 336
++V+ L+ L L L + LDLS N + P L+
Sbjct: 438 MEY-------ADVRVLHLAHKDLT-VLCHLEQL-LLVTHLDLSHNRLRALPPALAALRCL 488
Query: 337 SGAVFNISNNMLYGDLNSSSFRKFSLIDLSSN 368
V S+N L ++ + + L +N
Sbjct: 489 E--VLQASDNALENVDGVANLPRLQELLLCNN 518
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 3e-16
Identities = 32/164 (19%), Positives = 62/164 (37%), Gaps = 38/164 (23%)
Query: 513 NFSETNLIKK---GHSGDLFKGTLAGGTTVVVKKV--------SLHSFKKESYMMELDLF 561
+ + ++ G G ++KG G V VK + L +FK E ++
Sbjct: 22 PDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL----- 74
Query: 562 SRVSHARLVPLLGQCLEHE----TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWIT 617
+ H ++ +G + T+ + L LH +
Sbjct: 75 RKTRHVNILLFMGYSTAPQLAIVTQ------WCEGSSLYHHLHASET-------KFEMKK 121
Query: 618 RLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
+ IA A G+ YLH ++HRD+++++I L + V++G
Sbjct: 122 LIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIG 162
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 4e-16
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 26/146 (17%)
Query: 518 NLIKKGHSGDLFKGTLAGGTTVVVKKV---SLHSFKKESYMMELDLFSRVSHARLVPLLG 574
LI KG G ++ G G V ++ + + + +++ E+ + + H +V +G
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 575 QCLEHE-----TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGL 629
C+ T L S + LD +IA +G+
Sbjct: 97 ACMSPPHLAIITS------LCKGRTLYSVVRDAKI-------VLDVNKTRQIAQEIVKGM 143
Query: 630 SYLHHECNPPLVHRDVQASSILLDDK 655
YLH ++H+D+++ ++ D+
Sbjct: 144 GYLH---AKGILHKDLKSKNVFYDNG 166
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 4e-14
Identities = 50/244 (20%), Positives = 77/244 (31%), Gaps = 35/244 (14%)
Query: 118 PALQVLDLRSCSLSGS-----IPGSFGNLSRLNVLYLSGNSL----AGNVPATLGELKKL 168
P LQ L L L + G RL L L SL + + L
Sbjct: 113 PTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDF 172
Query: 169 SNLDLSRNLLTGEIPNAISLL-----GNLTRLNLASNFFTGQ----IPSGLYSLSSIQFL 219
L +S N + + L L L S T + + S +S++ L
Sbjct: 173 KELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLREL 232
Query: 220 NLSDNALTG-----FIPSEVGNLDKLIELDLSKNSIS----GSLPLELRGLRNLAKLVIS 270
L N L P + +L L + + I+ G L LR +L +L ++
Sbjct: 233 ALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLA 292
Query: 271 ENGLEG----QLSEGLFPTLDQLQVVDLSGNKLDG----ALPATLFLRPNLRFLDLSRNN 322
N L L E L QL+ + + + L L L +S N
Sbjct: 293 GNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNR 352
Query: 323 ITGS 326
+ +
Sbjct: 353 LEDA 356
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 9e-14
Identities = 55/247 (22%), Positives = 89/247 (36%), Gaps = 43/247 (17%)
Query: 117 LPALQVLDLRSCSLS----GSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGE-LK----K 167
L QV+ L C L+ I + L L L N L + + L+ K
Sbjct: 27 LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCK 86
Query: 168 LSNLDLSRNLLTGE----IPNAISLLGNLTRLNLASNFFTGQIPSGLYSLS--------S 215
+ L L LTG + + + L L L+L+ N +GL L
Sbjct: 87 IQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG---DAGLQLLCEGLLDPQCR 143
Query: 216 IQFLNLSDNALT----GFIPSEVGNLDKLIELDLSKNSISGS-LPLELRGLR----NLAK 266
++ L L +L+ + S + EL +S N I+ + + + +GL+ L
Sbjct: 144 LEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEA 203
Query: 267 LVISENGLEGQ----LSEGLFPTLDQLQVVDLSGNKL--DGA-LPATLFLRPN--LRFLD 317
L + G+ L + + L+ + L NKL G L P+ LR L
Sbjct: 204 LKLESCGVTSDNCRDLCGIV-ASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLW 262
Query: 318 LSRNNIT 324
+ IT
Sbjct: 263 IWECGIT 269
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 4e-13
Identities = 50/242 (20%), Positives = 87/242 (35%), Gaps = 35/242 (14%)
Query: 118 PALQVLDLRSCSLSGS-----IPGSFGNLSRLNVLYLSGNSL----AGNVPATLGELKKL 168
P + L + + ++ + G + +L L L + ++ + L
Sbjct: 170 PDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASL 229
Query: 169 SNLDLSRNLLTGEIPNAIS---LLGN--LTRLNLASNFFTGQ----IPSGLYSLSSIQFL 219
L L N L + L + L L + T + + L + S++ L
Sbjct: 230 RELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKEL 289
Query: 220 NLSDNALT-----GFIPSEVGNLDKLIELDLSKNSISG----SLPLELRGLRNLAKLVIS 270
+L+ N L + + +L L + S + L R L +L IS
Sbjct: 290 SLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQIS 349
Query: 271 ENGLEG----QLSEGLFPTLDQLQVVDLSGNKLD----GALPATLFLRPNLRFLDLSRNN 322
N LE +L +GL L+V+ L+ + +L ATL +LR LDLS N
Sbjct: 350 NNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC 409
Query: 323 IT 324
+
Sbjct: 410 LG 411
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 2e-11
Identities = 43/183 (23%), Positives = 68/183 (37%), Gaps = 28/183 (15%)
Query: 166 KKLSNLDLSRNLLTGE-IPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLN 220
+ +LD+ L+ + LL + L T I S L ++ LN
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 62
Query: 221 LSDNALTGFIPSEVGNL--------DKLIELDLSKNSIS----GSLPLELRGLRNLAKLV 268
L N L V + K+ +L L ++ G L LR L L +L
Sbjct: 63 LRSNELG---DVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELH 119
Query: 269 ISENGLEGQ----LSEGLFPTLDQLQVVDLSGNKLD----GALPATLFLRPNLRFLDLSR 320
+S+N L L EGL +L+ + L L L + L +P+ + L +S
Sbjct: 120 LSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSN 179
Query: 321 NNI 323
N+I
Sbjct: 180 NDI 182
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 2e-10
Identities = 51/245 (20%), Positives = 84/245 (34%), Gaps = 45/245 (18%)
Query: 120 LQVLDLRSCSLS----GSIPGSFGNLSRLNVLYLSGNSLAGN-----VPATLGELKKLSN 170
L+ L L SC ++ + G + + L L L N L P L +L
Sbjct: 201 LEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRT 260
Query: 171 LDLSRNLLTGE----IPNAISLLGNLTRLNLASNFFTGQIPSGLYSLS--------SIQF 218
L + +T + + + +L L+LA N G L ++
Sbjct: 261 LWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG---DEGARLLCETLLEPGCQLES 317
Query: 219 LNLSDNALTG----FIPSEVGNLDKLIELDLSKNSI--SGSLPLELRGLRN----LAKLV 268
L + + T S + L+EL +S N + +G L +GL L L
Sbjct: 318 LWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL-CQGLGQPGSVLRVLW 376
Query: 269 ISENGLEGQ----LSEGLFPTLDQLQVVDLSGNKLD--GALPATLFLRPN---LRFLDLS 319
+++ + L+ L L+ +DLS N L G L +R L L L
Sbjct: 377 LADCDVSDSSCSSLAATL-LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLY 435
Query: 320 RNNIT 324
+
Sbjct: 436 DIYWS 440
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 3e-13
Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 17/153 (11%)
Query: 519 LIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESY---MMELDLFSRVSHARLVPLLG 574
I +G ++KG V ++ K E ++ + H +V
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92
Query: 575 QCLEHETEKLLVY---KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
K + + M G L + L R ++ L+S W ++ +GL +
Sbjct: 93 SWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRS--WCRQI------LKGLQF 144
Query: 632 LHHECNPPLVHRDVQASSILLDDKF-EVRLGSL 663
LH PP++HRD++ +I + V++G L
Sbjct: 145 LH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDL 176
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 5e-13
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 9/146 (6%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+P ++P + + L ++ PG+F +L + LS N ++ P
Sbjct: 25 EIPTNLP-------ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQ 77
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY-SLSSIQFLNLS 222
L+ L++L L N +T + L +L L L +N + + L ++ L+L
Sbjct: 78 GLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLY 136
Query: 223 DNALTGFIPSEVGNLDKLIELDLSKN 248
DN L L + + L++N
Sbjct: 137 DNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 2e-12
Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLEL-RGLRNL 264
IP+ L +I + L N + P KL +DLS N IS L + +GLR+L
Sbjct: 26 IPTNL--PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSL 82
Query: 265 AKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNI 323
LV+ N + +L + LF L LQ++ L+ NK+ L F NL L L N +
Sbjct: 83 NSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKI-NCLRVDAFQDLHNLNLLSLYDNKL 140
Query: 324 T 324
Sbjct: 141 Q 141
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 4e-12
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 181 EIPNAISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEV-GNLD 238
EIP + +T + L N IP G ++ ++LS+N ++ + + L
Sbjct: 25 EIPTNLPE--TITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLR 80
Query: 239 KLIELDLSKNSISGSLPLEL-RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGN 297
L L L N I+ LP L GL +L L+++ N + L F L L ++ L N
Sbjct: 81 SLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDN 138
Query: 298 KLDGALPATLFLR-PNLRFLDLSRN 321
KL + F ++ + L++N
Sbjct: 139 KL-QTIAKGTFSPLRAIQTMHLAQN 162
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 5e-13
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 17/180 (9%)
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQI 206
L S+ + L + + + + + I L N+ L L N ++
Sbjct: 24 ANLKKKSVT-DAVTQNE-LNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGN----KL 75
Query: 207 PS-GLY-SLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLEL-RGLR 262
L+++ +L L+ N L +P+ V L L EL L +N + SLP + L
Sbjct: 76 HDISALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLT 133
Query: 263 NLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRN 321
NL L ++ N L+ L +G+F L L +DLS N+L +LP +F + L+ L L +N
Sbjct: 134 NLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQL-QSLPEGVFDKLTQLKDLRLYQN 191
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 3e-12
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG 180
+L+ S++ + L+ ++ + + + + +V + L + L L N L
Sbjct: 22 IKANLKKKSVT-DAV-TQNELNSIDQIIANNSDIK-SVQG-IQYLPNVRYLALGGNKLH- 76
Query: 181 EIPNAISL-----LGNLTRLNLASNFFTGQIPSGLY-SLSSIQFLNLSDNALTGFIPSEV 234
+ L NLT L L N +P+G++ L++++ L L +N L +P V
Sbjct: 77 ------DISALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQ-SLPDGV 128
Query: 235 GN-LDKLIELDLSKNSISGSLPLELRG----LRNLAKLVISENGLEGQLSEGLFPTLDQL 289
+ L L L+L+ N + SLP G L NL +L +S N L+ L EG+F L QL
Sbjct: 129 FDKLTNLTYLNLAHNQLQ-SLPK---GVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQL 183
Query: 290 QVVDLSGNKL----DGA 302
+ + L N+L DG
Sbjct: 184 KDLRLYQNQLKSVPDGV 200
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 85 AVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRL 144
+ L ++ + + N+ S+ G I LP ++ L L L I + L+ L
Sbjct: 36 TQNELNSIDQIIANNSDIKSVQG-IQ-----YLPNVRYLALGGNKLH-DI-SALKELTNL 87
Query: 145 NVLYLSGNSLAGNVPATL-GELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFT 203
L L+GN L ++P + +L L L L N L L NLT LNLA N
Sbjct: 88 TYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ 146
Query: 204 GQIPSGLY-SLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKN 248
+P G++ L+++ L+LS N L +P V L +L +L L +N
Sbjct: 147 -SLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQN 191
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 4e-10
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 15/146 (10%)
Query: 182 IPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGF--IPSEVGNLDK 239
P+ + NL T + L+SI + +++ + I L
Sbjct: 13 FPDDAFAET--IKANLKKKSVT-DAVTQN-ELNSIDQIIANNSDIKSVQGIQY----LPN 64
Query: 240 LIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL 299
+ L L N + + L+ L NL L+++ N L+ L G+F L L+ + L N+L
Sbjct: 65 VRYLALGGNKLH-DISA-LKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQL 121
Query: 300 DGALPATLFLRP-NLRFLDLSRNNIT 324
+LP +F + NL +L+L+ N +
Sbjct: 122 Q-SLPDGVFDKLTNLTYLNLAHNQLQ 146
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 9e-09
Identities = 39/135 (28%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175
L L L L L G F L+ L L L N L +L L+ L+L+
Sbjct: 83 ELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAH 142
Query: 176 NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY-SLSSIQFLNLSDNALTGFIPSEV 234
N L L NLT L+L+ N +P G++ L+ ++ L L N L +P V
Sbjct: 143 NQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLKS-VPDGV 200
Query: 235 -GNLDKLIELDLSKN 248
L L + L N
Sbjct: 201 FDRLTSLQYIWLHDN 215
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 6e-08
Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
L NLT L SLP + + +L L+ L L L G F L+ L
Sbjct: 82 KELTNLTYLILTGNQLQSLPNGVFD----KLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAI-SLLGNLTRLNLASNFFTGQ 205
L L+ N L +L L+ LDLS N L +P + L L L L N Q
Sbjct: 138 LNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQN----Q 192
Query: 206 ---IPSGLY-SLSSIQFLNLSDN 224
+P G++ L+S+Q++ L DN
Sbjct: 193 LKSVPDGVFDRLTSLQYIWLHDN 215
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 5e-13
Identities = 54/157 (34%), Positives = 72/157 (45%), Gaps = 7/157 (4%)
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQI 206
L L LA AT L KL+ L+L N L L L L LA+N +
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SL 98
Query: 207 PSGLY-SLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLEL-RGLRN 263
P G++ L+ + L L N L +PS V L KL EL L+ N + S+P L N
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTN 156
Query: 264 LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLD 300
L L +S N L+ + G F L +LQ + L GN+ D
Sbjct: 157 LQTLSLSTNQLQS-VPHGAFDRLGKLQTITLFGNQFD 192
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 1e-11
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 170 NLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY-SLSSIQFLNLSDNALTG 228
LDL L L LT LNL N + +G++ L+ + L L++N L
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANNQLA- 96
Query: 229 FIPSEV-GNLDKLIELDLSKNSISGSLPLEL-RGLRNLAKLVISENGLEGQLSEGLFPTL 286
+P V +L +L +L L N + SLP + L L +L ++ N L+ + G F L
Sbjct: 97 SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKL 154
Query: 287 DQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRN 321
LQ + LS N+L ++P F R L+ + L N
Sbjct: 155 TNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 8e-11
Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Query: 108 SIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATL-GELK 166
++ + L L L+L L G F +L+ L L L+ N LA ++P + L
Sbjct: 49 TLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLT 107
Query: 167 KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY-SLSSIQFLNLSDNA 225
+L L L N L L L L L +N IP+G + L+++Q L+LS N
Sbjct: 108 QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQ 166
Query: 226 LTGFIPSEVGNLDKLIELDLSKN 248
L L KL + L N
Sbjct: 167 LQSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 2e-10
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 193 TRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSIS 251
+L+L S + L+ + +LNL N L + + V +L +L L L+ N ++
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLGLANNQLA 96
Query: 252 GSLPLEL-RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310
SLPL + L L KL + N L+ L G+F L +L+ + L+ N+L ++PA F +
Sbjct: 97 -SLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQL-QSIPAGAFDK 153
Query: 311 -PNLRFLDLSRNNIT 324
NL+ L LS N +
Sbjct: 154 LTNLQTLSLSTNQLQ 168
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 3e-12
Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLELRGLRNL 264
IP + L L++N T + + L +L +++ S N I+ G +
Sbjct: 26 IPEHI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGV 83
Query: 265 AKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNI 323
+++++ N LE + +F L+ L+ + L N++ + F+ ++R L L N I
Sbjct: 84 NEILLTSNRLEN-VQHKMFKGLESLKTLMLRSNRI-TCVGNDSFIGLSSVRLLSLYDNQI 141
Query: 324 T 324
T
Sbjct: 142 T 142
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 6e-12
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175
+LP L+ ++ + ++ G+F S +N + L+ N L L+ L L L
Sbjct: 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 114
Query: 176 NLLTGEIPN-AISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNAL 226
N +T + N + L ++ L+L N T + G +L S+ LNL N
Sbjct: 115 NRIT-CVGNDSFIGLSSVRLLSLYDNQIT-TVAPGAFDTLHSLSTLNLLANPF 165
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 3e-11
Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 12/148 (8%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP--GSFGNLSRLNVLYLSGNSLAGNVPAT 161
+P IP L L + + + G F L +L + S N +
Sbjct: 25 KIPEHIP-------QYTAELRLNNNEFT-VLEATGIFKKLPQLRKINFSNNKITDIEEGA 76
Query: 162 LGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYS-LSSIQFLN 220
++ + L+ N L L +L L L SN T + + + LSS++ L+
Sbjct: 77 FEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLS 135
Query: 221 LSDNALTGFIPSEVGNLDKLIELDLSKN 248
L DN +T P L L L+L N
Sbjct: 136 LYDNQITTVAPGAFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 9e-06
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP-GSFGNLSRLN 145
+ + + + ++ + F L +L+ L LRS ++ + SF LS +
Sbjct: 78 EGASGVNEILLTSNRLENVQHKM---F-KGLESLKTLMLRSNRIT-CVGNDSFIGLSSVR 132
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRN 176
+L L N + P L LS L+L N
Sbjct: 133 LLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 4e-12
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 515 SETNLIKK---GHSGDLFKGTLAGGTT-VVVK--KVSLHSFKKESYMMELDLFSRVSHAR 568
+ L ++ G+ G++F G L T V VK + +L K ++ E + + SH
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
+V L+G C + + +V + + GD + L L T L++ AA G
Sbjct: 174 IVRLIGVCTQKQP-IYIVMELVQGGDFLTFLR-------TEGARLRVKTLLQMVGDAAAG 225
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
+ YL + +HRD+ A + L+ +K +++
Sbjct: 226 MEYLESK---CCIHRDLAARNCLVTEKNVLKIS 255
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 7e-12
Identities = 41/230 (17%), Positives = 72/230 (31%), Gaps = 46/230 (20%)
Query: 139 GNLSRLNVLYLSGNSL----AGNVPATLGELKKLSNLDLSRNLLTGE----IPNAISLLG 190
S + L +++ +V A L E + + LS N + E + I+
Sbjct: 2 ARFS-IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKK 60
Query: 191 NLTRLNLASNF---FTGQIPSGLYSLS-------SIQFLNLSDNALTG----FIPSEVGN 236
+L + F +IP L L + + LSDNA + +
Sbjct: 61 DLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSK 120
Query: 237 LDKLIELDLSKNSIS-------------GSLPLELRGLRNLAKLVISENGLEGQ----LS 279
L L L N + ++ + + L ++ N LE +
Sbjct: 121 HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWA 180
Query: 280 EGLFPTLDQLQVVDLSGNKL--DGALPA-TLFLRPN--LRFLDLSRNNIT 324
+ + L V + N + +G L L+ LDL N T
Sbjct: 181 KTF-QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 5e-11
Identities = 40/257 (15%), Positives = 77/257 (29%), Gaps = 50/257 (19%)
Query: 118 PALQVLDLRSCSLS----------GSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGEL-- 165
L++ + + + +L+ + LS N+ L +
Sbjct: 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLS 119
Query: 166 --KKLSNLDLSRN-------------LLTGEIPNAISLLGNLTRLNLASNFFTGQ----I 206
L +L L N L + L + N
Sbjct: 120 KHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEW 179
Query: 207 PSGLYSLSSIQFLNLSDNALT-----GFIPSEVGNLDKLIELDLSKNSIS--GSLPL--E 257
S + + + N + + + +L LDL N+ + GS L
Sbjct: 180 AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239
Query: 258 LRGLRNLAKLVISENGL--EG--QLSEGL-FPTLDQLQVVDLSGNKL--DGALPATLFLR 310
L+ NL +L +++ L G + + LQ + L N++ D +
Sbjct: 240 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVID 299
Query: 311 ---PNLRFLDLSRNNIT 324
P+L FL+L+ N +
Sbjct: 300 EKMPDLLFLELNGNRFS 316
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 34/207 (16%), Positives = 63/207 (30%), Gaps = 33/207 (15%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSG----SIPGSFGNLSRLNVLYLSGNSL--AGN 157
+L P L+ + L +F + L+ + + N + G
Sbjct: 145 ALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGI 204
Query: 158 VPA---TLGELKKLSNLDLSRNLLTGE----IPNAISLLGNLTRLNLASNFFTGQIPSGL 210
L ++L LDL N T + A+ NL L L + G
Sbjct: 205 EHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLS---ARGA 261
Query: 211 YSLS---------SIQFLNLSDNALT-----GFIPSEVGNLDKLIELDLSKNSIS--GSL 254
++ +Q L L N + + L+ L+L+ N S +
Sbjct: 262 AAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDV 321
Query: 255 PLELR-GLRNLAKLVISENGLEGQLSE 280
E+R + + E +L++
Sbjct: 322 VDEIREVFSTRGRGELDELDDMEELTD 348
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 67.2 bits (163), Expect = 1e-11
Identities = 93/593 (15%), Positives = 185/593 (31%), Gaps = 172/593 (29%)
Query: 211 YSLSSIQFLNLSDNALTGFIPSEVGNLD-KLIELDLSKNSISGSLPLELRGLRNLAKLVI 269
+ Q+ + L+ F + V N D K ++ D+ K+ +S + +++
Sbjct: 9 FETGEHQYQY--KDILSVFEDAFVDNFDCKDVQ-DMPKSILSK---------EEIDHIIM 56
Query: 270 SENGLEGQLSEGLFPTL--DQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSW 327
S++ + G L LF TL Q ++V ++ L R N +FL +S
Sbjct: 57 SKDAVSGTLR--LFWTLLSKQEEMVQKF---VEEVL------RINYKFL-MSPIKTEQRQ 104
Query: 328 PILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSL--IDLSSNYFQGTVADDRGRNVSL- 384
P + T ++ + LY D + F K+++ + Q + +NV +
Sbjct: 105 PSMMTR------MYIEQRDRLYND--NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID 156
Query: 385 -----GRNCLQSVASQRSSEDCRL----FYAERGLTFDNFGVLEPMQ------------- 422
G+ + C++ F+ VLE +Q
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 423 ------PPVPQHEEKSSKRWIFILVGVFGGLGFIAILVIVL-----------------VL 459
+ H ++ R + L +VL +L
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCL-------LVLLNVQNAKAWNAFNLSCKIL 269
Query: 460 ILRRCDKGIANQRGSANVGPVPEGHS----TP-------------PPKD---------PA 493
+ R K + + +A + H TP P+D P
Sbjct: 270 LTTR-FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR 328
Query: 494 IVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK--- 550
+S + +S + L N+ N K TT++ + SL+ +
Sbjct: 329 RLSIIAESIR-DGLATWD-NWKHVNCDKL--------------TTII--ESSLNVLEPAE 370
Query: 551 -KESYMMELDLF---SRVSHARLVPLLGQCLEHETEKL---LVYKYMVCGDLASSLHRVT 603
++ + L +F + + L + ++ + + L +V S +
Sbjct: 371 YRKMF-DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP 429
Query: 604 DLEDDSLQSLDWITRL-KIAIGA--------AEGL----------SYL-HHECNPPLVHR 643
+ + L+ L + + ++ L S++ HH N R
Sbjct: 430 SIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPER 489
Query: 644 DVQASSILLDDKF-EVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS--CMNGP 693
+ LD +F E ++ S S N L + + Y+ C N P
Sbjct: 490 MTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL---KFYKPYICDNDP 539
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.4 bits (161), Expect = 2e-11
Identities = 88/493 (17%), Positives = 159/493 (32%), Gaps = 152/493 (30%)
Query: 27 RSALLDLRSSLGL---------RSRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRI 77
R ALL+LR + + ++ W + + C S++ + ++ +N +
Sbjct: 141 RQALLELRPAKNVLIDGVLGSGKT--W-VALDVCLSYKVQCKMDFKIFWLN--------L 189
Query: 78 GRLN-PRFAVDSLGNL-TLLSSFNASGLSLPGSIP---EWFGYRL----------PALQV 122
N P ++ L L + S +I L L V
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249
Query: 123 LD-LRSCSLSGSIPGSFGNLSRLNVLYLSGNS-----LAGNVPA-----------TLGEL 165
L ++ + +F + +L + L+ T E+
Sbjct: 250 LLNVQ----NAKAWNAFNLSCK--ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 166 KKL-------SNLDLSRNLLTGEIPNAISLLGNLTR--LNLASNF-------FTGQIPSG 209
K L DL R +LT P +S++ R L N+ T I S
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTT-NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362
Query: 210 LYSLSSI----QFLNLS---DNALTGFIPSEV-----GNLDK--------------LIEL 243
L L F LS +A IP+ + ++ K L+E
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAH---IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEK 419
Query: 244 DLSKNSIS-GSLPLELRG-LRNLA----KLVISENGLEGQLSEGLFP-TLDQ-------- 288
+++IS S+ LEL+ L N +V N + S+ L P LDQ
Sbjct: 420 QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH 479
Query: 289 -LQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNM 347
L+ ++ L +FL + RFL+ + + +W NASG++ N
Sbjct: 480 HLKNIEHPERM---TLFRMVFL--DFRFLEQKIRHDSTAW-------NASGSILN----- 522
Query: 348 LYGDLNSSSFRKFSLIDLSSNYFQGTVADDRGRNV-SLGRNCLQSVASQRSSEDCRLFYA 406
L ++ + I + ++ V + + + N + S+ L
Sbjct: 523 TLQQLK--FYKPY--ICDNDPKYERLV-NAILDFLPKIEENLI-------CSKYTDLL-- 568
Query: 407 ERGLTFDNFGVLE 419
L ++ + E
Sbjct: 569 RIALMAEDEAIFE 581
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-11
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 16/124 (12%)
Query: 134 IPGSFGNLSRLNVLYLSGN---SLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLG 190
+ + L L LS N ++ L ++ L L L RNL+ +I N ++
Sbjct: 40 MDATLSTLKACKHLALSTNNIEKISS-----LSGMENLRILSLGRNLIK-KIENLDAVAD 93
Query: 191 NLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEV---GNLDKLIELDLSK 247
L L ++ N + SG+ L +++ L +S+N +T + E+ LDKL +L L+
Sbjct: 94 TLEELWISYNQIA-SL-SGIEKLVNLRVLYMSNNKITNW--GEIDKLAALDKLEDLLLAG 149
Query: 248 NSIS 251
N +
Sbjct: 150 NPLY 153
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 4e-11
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 22/172 (12%)
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQI 206
L+ + + ATL LK +L LS N + +I + +S + NL L+L N +I
Sbjct: 30 LHGMIPPIE-KMDATLSTLKACKHLALSTNNIE-KISS-LSGMENLRILSLGRNLIK-KI 85
Query: 207 PSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLE-LRGLRNLA 265
+ +++ L +S N + S + L L L +S N I+ ++ L L L
Sbjct: 86 ENLDAVADTLEELWISYNQIASL--SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLE 143
Query: 266 KLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLD 317
L+++ N L E + +++VV L PNL+ LD
Sbjct: 144 DLLLAGNPLYNDYKENNATSEYRIEVV------------KRL---PNLKKLD 180
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 6e-10
Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 35/177 (19%)
Query: 161 TLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLN 220
E +K+ L + ++ +S L L L++N +I S L + +++ L+
Sbjct: 21 VATEAEKVE-LHGMIPPIE-KMDATLSTLKACKHLALSTNNIE-KI-SSLSGMENLRILS 76
Query: 221 LSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSE 280
L N + + D L EL +S N I+ L G+ L L
Sbjct: 77 LGRNLIKKIENLD-AVADTLEELWISYNQIA-----SLSGIEKLVNL------------- 117
Query: 281 GLFPTLDQLQVVDLSGNKLDGALPATLFLR--PNLRFLDLSRNNITGSWPILSTNGN 335
+V+ +S NK+ L L L L+ N + + +
Sbjct: 118 ---------RVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSE 164
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 7e-06
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGN---SLAGNVPATLGELKKLSNLDL 173
+ L++L L + I L L++S N SL+G + +L L L +
Sbjct: 69 MENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASLSG-----IEKLVNLRVLYM 122
Query: 174 SRNLLT--GEIPNAISLLGNLTRLNLASN 200
S N +T GEI + ++ L L L LA N
Sbjct: 123 SNNKITNWGEI-DKLAALDKLEDLLLAGN 150
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 518 NLIKKGHSGDLFKGTLAGG----TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVP 571
+I +GH G ++ GTL VK + ++ E + SH ++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
LLG CL E L+V YM GDL + + E + D I + A+G+ Y
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLI---GFGLQVAKGMKY 143
Query: 632 L--HHECNPPLVHRDVQASSILLDDKFEVRLG 661
L VHRD+ A + +LD+KF V++
Sbjct: 144 LASKK-----FVHRDLAARNCMLDEKFTVKVA 170
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 3e-11
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 20/153 (13%)
Query: 522 KGHSGDLFKGTLAGG----TTVVVK--KVSLHSFK-KESYMMELDLFSRVSHARLVPLLG 574
+G G + +G L V VK K+ S + E ++ E SH ++ LLG
Sbjct: 44 EGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLG 103
Query: 575 QCLEHETEK----LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
C+E ++ +++ +M GDL + L + LE + + T LK + A G+
Sbjct: 104 VCIEMSSQGIPKPMVILPFMKYGDLHTYL-LYSRLETGP-KHIPLQTLLKFMVDIALGME 161
Query: 631 YL--HHECNPPLVHRDVQASSILLDDKFEVRLG 661
YL + +HRD+ A + +L D V +
Sbjct: 162 YLSNRN-----FLHRDLAARNCMLRDDMTVCVA 189
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 4e-11
Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 20/152 (13%)
Query: 518 NLIKKGHSGDLFKGTLAGG----TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVP 571
+I KGH G ++ G +K + E+++ E L ++H ++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
L+G L E ++ YM GDL + + D I + A G+ Y
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRS----PQRNPTVKDLI---SFGLQVARGMEY 139
Query: 632 L--HHECNPPLVHRDVQASSILLDDKFEVRLG 661
L VHRD+ A + +LD+ F V++
Sbjct: 140 LAEQK-----FVHRDLAARNCMLDESFTVKVA 166
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 64.0 bits (155), Expect = 4e-11
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 133 SIPGSFGNLSRLNVLYLSGNSLAGNVPA-TLGELKKLSNLDLSRNLLTGEIPNAISLLGN 191
L LY+ ++ L L +L NL + ++ L P+A
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 192 LTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT 227
L+RLNL+ N + S+Q L LS N L
Sbjct: 82 LSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 61.7 bits (149), Expect = 2e-10
Identities = 21/106 (19%), Positives = 32/106 (30%), Gaps = 7/106 (6%)
Query: 99 NASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP-GSFGNLSRLNVLYLSGNSLAGN 157
L +P L L + + + L L L + + L
Sbjct: 17 RDGALDSLHHLPG-----AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFV 71
Query: 158 VPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFT 203
P +LS L+LS N L + L +L L L+ N
Sbjct: 72 APDAFHFTPRLSRLNLSFNALESLSWKTVQGL-SLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 3e-08
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 3/96 (3%)
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLELRGLRNL 264
L ++ L + + + L +L L + K+ + P L
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRL 82
Query: 265 AKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLD 300
++L +S N LE LS L LQ + LSGN L
Sbjct: 83 SRLNLSFNALE-SLSWKTVQGL-SLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 53.2 bits (127), Expect = 1e-07
Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 253 SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-P 311
L G NL +L I L L +L+ + + + L + F P
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTP 80
Query: 312 NLRFLDLSRNNIT 324
L L+LS N +
Sbjct: 81 RLSRLNLSFNALE 93
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 46.3 bits (109), Expect = 2e-05
Identities = 26/110 (23%), Positives = 36/110 (32%), Gaps = 1/110 (0%)
Query: 70 SGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCS 129
G R R ++ L L+ + L L+ L +
Sbjct: 8 HGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSG 67
Query: 130 LSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLT 179
L P +F RL+ L LS N+L T+ L L L LS N L
Sbjct: 68 LRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGL-SLQELVLSGNPLH 116
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 4e-11
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 522 KGHSGDLFKGTLAGG------TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLL 573
+G G +++G G T V +K + ++ ++ E + + +V LL
Sbjct: 35 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94
Query: 574 GQCLEHETEKLLVYKYMVCGDLASSL--HRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
G + + L++ + M GDL S L R + L +++A A+G++Y
Sbjct: 95 GVVSQGQP-TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 153
Query: 632 LH-HECNPPLVHRDVQASSILLDDKFEVRLG 661
L+ ++ VHRD+ A + ++ + F V++G
Sbjct: 154 LNANKF----VHRDLAARNCMVAEDFTVKIG 180
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 8e-11
Identities = 28/137 (20%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Query: 522 KGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581
G G+++ T T V VK + S E+++ E ++ + H +LV L +
Sbjct: 198 AGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI 257
Query: 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLV 641
++ ++M G L + L+ D + + AEG++++ +
Sbjct: 258 --YIITEFMAKGSL------LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YI 306
Query: 642 HRDVQASSILLDDKFEV 658
HRD++A++IL+
Sbjct: 307 HRDLRAANILVSASLVC 323
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 1e-10
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 522 KGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581
G G+++ G G T V VK + S ++++ E +L ++ H RLV L +
Sbjct: 23 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI 82
Query: 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLV 641
++ +YM G L L + ++ L L +A AEG++++ +
Sbjct: 83 --YIITEYMENGSLVDFL-KTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 131
Query: 642 HRDVQASSILLDDKFEVRLG 661
HRD++A++IL+ D ++
Sbjct: 132 HRDLRAANILVSDTLSCKIA 151
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 32/154 (20%), Positives = 59/154 (38%), Gaps = 21/154 (13%)
Query: 522 KGHSGDLFKGTLAGG----TTVVVK--KVSLHSFK-KESYMMELDLFSRVSHARLVPLLG 574
KG G + + L V VK K + + E ++ E H + L+G
Sbjct: 33 KGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVG 92
Query: 575 QCLEHETEK-----LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGL 629
L + +++ +M GDL + L E+ +L T ++ + A G+
Sbjct: 93 VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF--NLPLQTLVRFMVDIACGM 150
Query: 630 SYL--HHECNPPLVHRDVQASSILLDDKFEVRLG 661
YL + +HRD+ A + +L + V +
Sbjct: 151 EYLSSRN-----FIHRDLAARNCMLAEDMTVCVA 179
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-10
Identities = 31/164 (18%), Positives = 52/164 (31%), Gaps = 34/164 (20%)
Query: 162 LGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPS--GLYSLSSIQFL 219
+ LDL + I N + L ++ + N +I G L ++ L
Sbjct: 15 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDN----EIRKLDGFPLLRRLKTL 69
Query: 220 NLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLS 279
+++N + L L EL L+ NS+ EL L LA
Sbjct: 70 LVNNNRICRIGEGLDQALPDLTELILTNNSLV-----ELGDLDPLAS------------- 111
Query: 280 EGLFPTLDQLQVVDLSGN---KLDGALPATLFLRPNLRFLDLSR 320
L L + + N ++ P +R LD +
Sbjct: 112 ------LKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQK 149
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 2e-10
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 9/120 (7%)
Query: 208 SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLE-LRGLRNLAK 266
+ + + L+L + I + LD+ +D S N I L+ LR L
Sbjct: 13 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR---KLDGFPLLRRLKT 68
Query: 267 LVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR--PNLRFLDLSRNNIT 324
L+++ N + ++ EGL L L + L+ N L L L +L +L + RN +T
Sbjct: 69 LLVNNNRIC-RIGEGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 126
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 6e-07
Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 12/109 (11%)
Query: 219 LNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENG---LE 275
+ L+ + ++ N + ELDL I + L + S+N L+
Sbjct: 2 VKLTAELIEQ--AAQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKLD 58
Query: 276 GQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
G FP L +L+ + ++ N++ P+L L L+ N++
Sbjct: 59 G------FPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 5e-06
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 7/116 (6%)
Query: 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNV 146
N + G +P I E G L +D + + G F L RL
Sbjct: 13 AQYTNAVRDRELDLRGYKIP-VI-ENLGATLDQFDAIDFSDNEIR-KLDG-FPLLRRLKT 68
Query: 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLT--GEIPNAISLLGNLTRLNLASN 200
L ++ N + L L+ L L+ N L G++ + ++ L +LT L + N
Sbjct: 69 LLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDL-DPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 1e-04
Identities = 25/109 (22%), Positives = 39/109 (35%), Gaps = 13/109 (11%)
Query: 243 LDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGN---KL 299
+ L+ I + + +L + + + E L TLDQ +D S N KL
Sbjct: 2 VKLTAELIEQAA--QYTNAVRDRELDLRGYKIP--VIENLGATLDQFDAIDFSDNEIRKL 57
Query: 300 DGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNML 348
DG L L+ L ++ N I L ++NN L
Sbjct: 58 DG-----FPLLRRLKTLLVNNNRICRIGEGLDQA-LPDLTELILTNNSL 100
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Query: 522 KGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581
+G G+++ GT G T V +K + + E+++ E + ++ H +LV L E
Sbjct: 194 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 253
Query: 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLV 641
+V +YM G L L ++ + L + +A A G++Y+ V
Sbjct: 254 --YIVTEYMSKGSLLDFLK------GETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 302
Query: 642 HRDVQASSILLDDKFEV 658
HRD++A++IL+ +
Sbjct: 303 HRDLRAANILVGENLVC 319
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 1e-10
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 522 KGHSGDLFKGTLAGGTTVVVKKV----SLHSFKKESYMMELDLFSRVSHARLVPLLGQCL 577
KG GD+ G G V VK + + +F E+ +M +++ H+ LV LLG +
Sbjct: 203 KGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVM-----TQLRHSNLVQLLGVIV 256
Query: 578 EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECN 637
E + +V +YM G L L L LK ++ E + YL
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLR------SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN- 309
Query: 638 PPLVHRDVQASSILLDDKFEV 658
VHRD+ A ++L+ +
Sbjct: 310 --FVHRDLAARNVLVSEDNVA 328
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 1e-10
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 518 NLIKKGHSGDLFKGTLAGG----TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVP 571
+I +GH G ++ GTL VK + ++ E + SH ++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
LLG CL E L+V YM GDL + + E + D I + A+G+ +
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLI---GFGLQVAKGMKF 207
Query: 632 L--HHECNPPLVHRDVQASSILLDDKFEVRLG 661
L VHRD+ A + +LD+KF V++
Sbjct: 208 LASKK-----FVHRDLAARNCMLDEKFTVKVA 234
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 2e-10
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD 223
+++L LD ++ G+I + NL L+L + + S L L ++ L LS+
Sbjct: 25 AVREL-VLDNCKSND-GKIEGLTAEFVNLEFLSLINVGLI-SV-SNLPKLPKLKKLELSE 80
Query: 224 NALTGFIPSEVGNLDKLIELDLSKNSISGSLPLE-LRGLRNLAKLVISEN 272
N + G + L L L+LS N + LE L+ L L L +
Sbjct: 81 NRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 4e-09
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 96 SSFNASGLSLPGSI-PEWFGYRLPALQVLDLRSCSLS-GSIPGSFGNLSRLNVLYLSGNS 153
S +SG+ + I E A++ L L +C + G I G L L L
Sbjct: 1 GSSGSSGMDMKRRIHLELRNRTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVG 60
Query: 154 LAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFT--GQIPSGLY 211
L + L +L KL L+LS N + G + L NLT LNL+ N + L
Sbjct: 61 LI--SVSNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTL-EPLK 117
Query: 212 SLSSIQFLNLSDNALT 227
L ++ L+L + +T
Sbjct: 118 KLECLKSLDLFNCEVT 133
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 7e-06
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 236 NLDKLIELDLSKNSISGSLPLELRG-LRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDL 294
+ EL L + L NL L + GL S P L +L+ ++L
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI---SVSNLPKLPKLKKLEL 78
Query: 295 SGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
S N++ G L PNL L+LS N +
Sbjct: 79 SENRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 2e-10
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD 223
++K+L LD SR+ G++ L L+ + T I + L L+ ++ L LSD
Sbjct: 18 DVKELV-LDNSRSNE-GKLEGLTDEFEELEFLSTINVGLT-SI-ANLPKLNKLKKLELSD 73
Query: 224 NALTGFIPSEVGNLDKLIELDLSKNSISGSLPLE-LRGLRNLAKLVISEN 272
N ++G + L L+LS N I +E L+ L NL L +
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 1e-08
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Query: 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLA--GNVPATLGELKKLSNLDLSRNLLT 179
VLD + G + G L L L N+P +L KL L+LS N ++
Sbjct: 23 VLDNSRSNE-GKLEGLTDEFEELEFLSTINVGLTSIANLP----KLNKLKKLELSDNRVS 77
Query: 180 GEIPNAISLLGNLTRLNLASNFFTG-QIPSGLYSLSSIQFLNLSDNALT 227
G + NLT LNL+ N L L +++ L+L + +T
Sbjct: 78 GGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 3e-06
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 236 NLDKLIELDLSKNSIS-GSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDL 294
+ EL L + + G L L L GL ++ P L++L+ ++L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SIAN--LPKLNKLKKLEL 71
Query: 295 SGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
S N++ G L PNL L+LS N I
Sbjct: 72 SDNRVSGGLEVLAEKCPNLTHLNLSGNKIK 101
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 7e-06
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAG-NVPATLGELKKLSNLDLS 174
+L L+ L+L +SG + L L LSGN + + L +L+ L +LDL
Sbjct: 62 KLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLF 121
Query: 175 RNLLTGEIPN----AISLLGNLTRL 195
+T + + LL LT L
Sbjct: 122 NCEVT-NLNDYRENVFKLLPQLTYL 145
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Query: 256 LELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLD--GALPATLFLRPNL 313
L R ++ +LV+ + EGL ++L+ + L LP L
Sbjct: 11 LRNRTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKL----NKL 66
Query: 314 RFLDLSRNNITGSWPILSTNGNASGAVFNISNNML 348
+ L+LS N ++G +L+ + N+S N +
Sbjct: 67 KKLELSDNRVSGGLEVLAEK-CPNLTHLNLSGNKI 100
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 3e-10
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 11/138 (7%)
Query: 522 KGHSGDLFKGTLAG-GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHE 580
G G++++G TV VK + + + E ++ E + + H LV LLG C
Sbjct: 230 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 289
Query: 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPL 640
++ ++M G+L L Q + + L +A + + YL +
Sbjct: 290 P-FYIITEFMTYGNLLDYLRECNR------QEVSAVVLLYMATQISSAMEYLEKKN---F 339
Query: 641 VHRDVQASSILLDDKFEV 658
+HR++ A + L+ + V
Sbjct: 340 IHRNLAARNCLVGENHLV 357
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 3e-10
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Query: 522 KGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581
+G G+++ GT G T V +K + + E+++ E + ++ H +LV L E
Sbjct: 277 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 336
Query: 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLV 641
+V +YM G L L ++ + L + +A A G++Y+ V
Sbjct: 337 --YIVTEYMSKGSLLDFLK------GETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 385
Query: 642 HRDVQASSILLDDKFEV 658
HRD++A++IL+ +
Sbjct: 386 HRDLRAANILVGENLVC 402
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 61.5 bits (149), Expect = 5e-10
Identities = 54/295 (18%), Positives = 94/295 (31%), Gaps = 47/295 (15%)
Query: 51 CRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTL-----LSSFNASGLSL 105
C+SW ++ + I + RF + ++ L + FN
Sbjct: 34 CKSWYEIE--RWCRRKVFIGNCYAVSPATVIRRF--PKVRSVELKGKPHFADFNLVPDGW 89
Query: 106 PGSIPEW---FGYRLPALQVLDLRSCSLS----GSIPGSFGNLSRLNVLYLSGNSLAGNV 158
G + W L+ + L+ ++ I SF N L + G S G +
Sbjct: 90 GGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDG-L 148
Query: 159 PATLGELKKLSNLDLSRNLLTGEIPNAISLLG----NLTRLNLASNFFTGQIPSGLYSLS 214
A + L LDL + + + +S +L LN++
Sbjct: 149 AAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLAS------------ 196
Query: 215 SIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISE--N 272
+S +AL V L L L++ L L+ L +L
Sbjct: 197 -----EVSFSALERL----VTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTA 247
Query: 273 GLEGQLSEGLFPTLDQL-QVVDLSG--NKLDGALPATLFLRPNLRFLDLSRNNIT 324
+ + GL L ++ LSG + + LPA + L L+LS +
Sbjct: 248 EVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQ 302
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 58.8 bits (142), Expect = 4e-09
Identities = 36/245 (14%), Positives = 73/245 (29%), Gaps = 15/245 (6%)
Query: 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSL--SGSIPGSFGNLSRLNVLY 148
+ T L + + E +VL L SC + + L L
Sbjct: 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELD 162
Query: 149 LSGNSLAGNVPATLGEL----KKLSNLDLS--RNLLTGE-IPNAISLLGNLTRLNLASNF 201
L + + L L +L++S + ++ + ++ NL L L
Sbjct: 163 LRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAV 222
Query: 202 FTGQIPSGLYSLSSIQFLNLS------DNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255
++ + L ++ L + + + +L L +++ LP
Sbjct: 223 PLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLP 282
Query: 256 LELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRF 315
L L +S ++ L +LQ + + D L +LR
Sbjct: 283 AVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRE 342
Query: 316 LDLSR 320
L +
Sbjct: 343 LRVFP 347
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 3e-05
Identities = 49/311 (15%), Positives = 90/311 (28%), Gaps = 42/311 (13%)
Query: 31 LDLRSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLG 90
L L S G + CR+ + +++ + D+
Sbjct: 135 LVLSSCEGFSTDGLAAIAATCRNLK----------ELDLRESDVDDVSGHWLSHFPDTYT 184
Query: 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLS 150
+L L+ + ++ E R P L+ L L + +L L
Sbjct: 185 SLVSLNISCLASEVSFSAL-ERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTG 243
Query: 151 G------NSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG 204
G + + L K+L L + + +P S+ LT LNL+
Sbjct: 244 GYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQS 303
Query: 205 ----QIPSGLYSLSSIQFLN-LSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELR 259
++ L + L+ + D L L EL +
Sbjct: 304 YDLVKLLCQCPKLQRLWVLDYIEDAGLEVL----ASTCKDLRELRVFP----------SE 349
Query: 260 GLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL-DGALPATLFLRPNLRFLDL 318
+ ++E GL +S G +L+ V ++ + AL RPN+ L
Sbjct: 350 PFVMEPNVALTEQGLV-SVSMGCP----KLESVLYFCRQMTNAALITIARNRPNMTRFRL 404
Query: 319 SRNNITGSWPI 329
+
Sbjct: 405 CIIEPKAPDYL 415
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 6e-05
Identities = 30/237 (12%), Positives = 68/237 (28%), Gaps = 28/237 (11%)
Query: 116 RLPALQVLDLRSCSLSG------SIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLS 169
R P L+ L + + + L L +++ +PA +L+
Sbjct: 233 RAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLT 292
Query: 170 NLDLSR-NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTG 228
L+LS + + ++ + L RL + + + ++ L + +
Sbjct: 293 TLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFV 352
Query: 229 FIPSE----------VGNLDKLIELDLSKNSISG-SLPLELRGLRNLAKLVISENGLEGQ 277
P+ KL + ++ +L R N+ + + +
Sbjct: 353 MEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAP 412
Query: 278 LSEGLFPTLD----------QLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
L P L+ + LSG D + L ++ +
Sbjct: 413 DYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDS 469
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 1e-09
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 3/129 (2%)
Query: 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATL-GELKKLSNLDLSRNLLT 179
Q+L L ++ PG F +L L LYL N L +P + L +L+ LDL N LT
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLT 101
Query: 180 GEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDK 239
L +L L + N T +P G+ L+ + L L N L L
Sbjct: 102 VLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSS 160
Query: 240 LIELDLSKN 248
L L N
Sbjct: 161 LTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 7e-07
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLEL-RGLRNL 264
+P+G+ ++ Q L L DN +T P +L L EL L N + +LP+ + L L
Sbjct: 34 VPAGI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQL 90
Query: 265 AKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRN 321
L + N L L +F L L+ + + NKL LP + +L L L +N
Sbjct: 91 TVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKL-TELPRGIERLTHLTHLALDQN 145
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 1e-09
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 21/142 (14%)
Query: 522 KGHSGDLFKGTLAGGTTVVVKKV----SLHSFKKESYMMELDLFSRVSHARLVPLLGQCL 577
KG GD+ G G V VK + + +F E+ +M +++ H+ LV LLG +
Sbjct: 31 KGEFGDVMLGD-YRGNKVAVKCIKNDATAQAFLAEASVM-----TQLRHSNLVQLLGVIV 84
Query: 578 EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL-HHEC 636
E + +V +YM G L L L LK ++ E + YL +
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLR------SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 138
Query: 637 NPPLVHRDVQASSILLDDKFEV 658
VHRD+ A ++L+ +
Sbjct: 139 ----VHRDLAARNVLVSEDNVA 156
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 1e-09
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 522 KGHSGDLFKGTLAGG------TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLL 573
G G++++G ++G V VK + ++ME + S+ +H +V +
Sbjct: 40 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 99
Query: 574 GQCLEHETEKLLVYKYMVCGDLASSL--HRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
G L+ + ++ + M GDL S L R + SL LD L +A A G Y
Sbjct: 100 GVSLQSLP-RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLD---LLHVARDIACGCQY 155
Query: 632 L--HHECNPPLVHRDVQASSILLDDKFE 657
L +H +HRD+ A + LL
Sbjct: 156 LEENH-----FIHRDIAARNCLLTCPGP 178
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 1e-09
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 522 KGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581
G G + G V +K + + +E ++ E ++ ++SH +LV L G CLE
Sbjct: 18 SGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 77
Query: 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLV 641
LV ++M G L+ L T L + + EG++YL C ++
Sbjct: 78 -ICLVTEFMEHGCLSDYLR-------TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 642 HRDVQASSILLDDKFEVRLG 661
HRD+ A + L+ + +++
Sbjct: 127 HRDLAARNCLVGENQVIKVS 146
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 1e-09
Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 15/142 (10%)
Query: 522 KGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581
G G + G G V +K + S ++ ++ E + +SH +LV L G C +
Sbjct: 34 TGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR- 92
Query: 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL--HHECNPP 639
++ +YM G L + L + L++ E + YL
Sbjct: 93 PIFIITEYMANGCLLNYLR-------EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----- 140
Query: 640 LVHRDVQASSILLDDKFEVRLG 661
+HRD+ A + L++D+ V++
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVS 162
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 1e-09
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 11/140 (7%)
Query: 522 KGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581
G G + G G V VK + S ++ + E ++SH +LV G C +
Sbjct: 18 SGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP 77
Query: 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLV 641
+V +Y+ G L + L + L+ L++ EG+++L +
Sbjct: 78 -IYIVTEYISNGCLLNYLR-------SHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FI 126
Query: 642 HRDVQASSILLDDKFEVRLG 661
HRD+ A + L+D V++
Sbjct: 127 HRDLAARNCLVDRDLCVKVS 146
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 1e-09
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 30/153 (19%)
Query: 522 KGHSGDLFKGTLAG-----GTTVVVKKVSLHS-------FKKESYMMELDLFSRVSHARL 569
+GH G + G V VK + + +K+E ++ + H +
Sbjct: 41 EGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDIL-----RTLYHEHI 95
Query: 570 VPLLGQCLEHETEKL-LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
+ G C + L LV +Y+ G L L R S+ L A EG
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR---------HSIGLAQLLLFAQQICEG 146
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
++YL H + +HRD+ A ++LLD+ V++G
Sbjct: 147 MAYL-HAQH--YIHRDLAARNVLLDNDRLVKIG 176
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 2e-09
Identities = 30/141 (21%), Positives = 62/141 (43%), Gaps = 11/141 (7%)
Query: 522 KGHSGDLFKGTLAGGTTVV-VKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHE 580
G G++++G + V VK + + + E ++ E + + H LV LLG C
Sbjct: 23 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPL 640
++ ++M G+L L + + Q + + L +A + + YL +
Sbjct: 83 -PFYIITEFMTYGNLLDYLR------ECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 641 VHRDVQASSILLDDKFEVRLG 661
+HRD+ A + L+ + V++
Sbjct: 133 IHRDLAARNCLVGENHLVKVA 153
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLV 570
F + + + G+ G +FK + G + K + L + + EL + + +V
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
G + E + ++M G L L + + + L K++I +GL+
Sbjct: 95 GFYG-AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--------KVSIAVIKGLT 145
Query: 631 YLHHECNPPLVHRDVQASSILLDDKFEVRL 660
YL + ++HRDV+ S+IL++ + E++L
Sbjct: 146 YLREKHK--IMHRDVKPSNILVNSRGEIKL 173
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 2e-09
Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 22/156 (14%)
Query: 522 KGHSGDLFKGTLAGG------TTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLG 574
+G G +F V VK + S ++ + E +L + + H +V G
Sbjct: 51 EGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFG 110
Query: 575 QCLEHETEKLLVYKYMVCGDLASSL--HR-----VTDLEDDSLQSLDWITRLKIAIGAAE 627
C E L+V++YM GDL L H + ED + L L +A A
Sbjct: 111 VCTEGRP-LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA 169
Query: 628 GLSYL--HHECNPPLVHRDVQASSILLDDKFEVRLG 661
G+ YL H VHRD+ + L+ V++G
Sbjct: 170 GMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIG 200
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 3e-09
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 522 KGHSGDLFKGTLAGG------TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLL 573
G G++++G ++G V VK + ++ME + S+ +H +V +
Sbjct: 81 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 140
Query: 574 GQCLEHETEKLLVYKYMVCGDLASSL--HRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
G L+ + ++ + M GDL S L R + SL LD L +A A G Y
Sbjct: 141 GVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD---LLHVARDIACGCQY 196
Query: 632 L--HHECNPPLVHRDVQASSILLDDKFE 657
L +H +HRD+ A + LL
Sbjct: 197 LEENH-----FIHRDIAARNCLLTCPGP 219
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 21/141 (14%)
Query: 518 NLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQC 576
+ +G G++ + G VKKV L F+ E EL + +S R+VPL G
Sbjct: 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE----ELVACAGLSSPRIVPLYG-A 118
Query: 577 LEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITR--LKIAIGAAEGLSYLHH 634
+ + + + G L + ++ L +D L EGL YLH
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALY---YLGQAL-------EGLEYLHT 168
Query: 635 ECNPPLVHRDVQASSILLDDK 655
++H DV+A ++LL
Sbjct: 169 RR---ILHGDVKADNVLLSSD 186
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 4e-09
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 22/158 (13%)
Query: 522 KGHSGDLFKGTLAG------GTTVVVK--KVSLHSFKKESYMMELDLFSRV-SHARLVPL 572
+G G + + G TV VK K + + M EL + + H +V L
Sbjct: 37 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 573 LGQCLEHETEKLLVYKYMVCGDLASSL--HR------VTDLEDDSLQSLDWITRLKIAIG 624
LG C + +++ ++ G+L++ L R ED L + +
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 156
Query: 625 AAEGLSYL-HHECNPPLVHRDVQASSILLDDKFEVRLG 661
A+G+ +L +C +HRD+ A +ILL +K V++
Sbjct: 157 VAKGMEFLASRKC----IHRDLAARNILLSEKNVVKIC 190
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 6e-09
Identities = 40/190 (21%), Positives = 72/190 (37%), Gaps = 32/190 (16%)
Query: 487 PPPKDPAIVSGVGDSFTYEQLLRATGNF------SETNLIKK---GHSGDLFKGTL---- 533
P P+ A + TYE+ RA +F S ++ K G SG++ G L
Sbjct: 21 PEPQFYA------EPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPG 74
Query: 534 AGGTTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591
V +K K ++ ++ E + + H ++ L G ++V +YM
Sbjct: 75 QRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL-AMIVTEYME 133
Query: 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSIL 651
G L + L + + + G G+ YL + VHRD+ A ++L
Sbjct: 134 NGSLDTFLR-------THDGQFTIMQLVGMLRGVGAGMRYLS-DLG--YVHRDLAARNVL 183
Query: 652 LDDKFEVRLG 661
+D ++
Sbjct: 184 VDSNLVCKVS 193
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 7e-09
Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 28/153 (18%)
Query: 522 KGHSGDLFKGTLAG-----GTTVVVKKV-------SLHSFKKESYMMELDLFSRVSHARL 569
+GH G + G V VK + + KKE ++ + H +
Sbjct: 31 EGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEIL-----RNLYHENI 85
Query: 570 VPLLGQCLEHETEKL-LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
V G C E + L+ +++ G L L + + ++ +LK A+ +G
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK-------NKNKINLKQQLKYAVQICKG 138
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
+ YL VHRD+ A ++L++ + +V++G
Sbjct: 139 MDYL-GSRQ--YVHRDLAARNVLVESEHQVKIG 168
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 8e-09
Identities = 46/148 (31%), Positives = 63/148 (42%), Gaps = 13/148 (8%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
S+P IP LDL + SL G F L+ L LYL GN L
Sbjct: 21 SVPTGIP-------AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFN 73
Query: 164 ELKKLSNLDLSRNLLTGEIPNAI-SLLGNLTRLNLASNFFTGQIPSGLY-SLSSIQFLNL 221
+L L+ L+LS N L +PN + L L L L +N +P G++ L+ ++ L L
Sbjct: 74 KLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRL 131
Query: 222 SDNALTGFIPSEV-GNLDKLIELDLSKN 248
N L +P V L L + L N
Sbjct: 132 YQNQLKS-VPDGVFDRLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLEL-RGLRNL 264
+P+G+ + +L+L N+L L L +L L N + SLP + L +L
Sbjct: 22 VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSL 78
Query: 265 AKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRN 321
L +S N L+ L G+F L QL+ + L+ N+L +LP +F + L+ L L +N
Sbjct: 79 TYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQL-QSLPDGVFDKLTQLKDLRLYQN 134
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 33/139 (23%)
Query: 170 NLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY-SLSSIQFLNLSDNALTG 228
LDL N L L +LT+L L N +P+G++ L+S+ +LNLS N L
Sbjct: 32 YLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQS 90
Query: 229 FIPSEV-GNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLD 287
+P+ V L +L EL L+ N + SLP +G+F L
Sbjct: 91 -LPNGVFDKLTQLKELALNTNQLQ-SLP------------------------DGVFDKLT 124
Query: 288 QLQVVDLSGNKL----DGA 302
QL+ + L N+L DG
Sbjct: 125 QLKDLRLYQNQLKSVPDGV 143
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 8e-09
Identities = 41/198 (20%), Positives = 70/198 (35%), Gaps = 41/198 (20%)
Query: 476 NVGPVPEGHSTPPPKDPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAG 535
N+ S +DP + Q L GNF G +
Sbjct: 19 NLYFQGAMGSAFEDRDPTQFEE--RHLKFLQQL-GKGNF-----------GSVEMCRYDP 64
Query: 536 -----GTTVVVKKV------SLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584
G V VKK+ L F++E ++ + H +V G C L
Sbjct: 65 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-----KSLQHDNIVKYKGVCYSAGRRNL 119
Query: 585 -LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHR 643
L+ +Y+ G L L + + +D I L+ +G+ YL +HR
Sbjct: 120 KLIMEYLPYGSLRDYLQK-------HKERIDHIKLLQYTSQICKGMEYL-GTKR--YIHR 169
Query: 644 DVQASSILLDDKFEVRLG 661
D+ +IL++++ V++G
Sbjct: 170 DLATRNILVENENRVKIG 187
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 8e-09
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 24/150 (16%)
Query: 523 GHSGDLFKGTL--------AGGTTVVVKKV-SLHSFKKESYMMELDLFSRVSHARLVPLL 573
G +FKG T V++K + H ES+ + S++SH LV
Sbjct: 19 GTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNY 78
Query: 574 GQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL- 632
G C+ + E +LV +++ G L + L + + + L +L++A A + +L
Sbjct: 79 GVCVCGD-ENILVQEFVKFGSLDTYLKK----NKNCINILW---KLEVAKQLAAAMHFLE 130
Query: 633 -HHECNPPLVHRDVQASSILLDDKFEVRLG 661
+ L+H +V A +ILL + + + G
Sbjct: 131 ENT-----LIHGNVCAKNILLIREEDRKTG 155
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 23/157 (14%)
Query: 522 KGHSGDLFKGTLAGG------TTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLG 574
+G G +F V VK + + ++ + E +L + + H +V G
Sbjct: 25 EGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYG 84
Query: 575 QCLEHETEKLLVYKYMVCGDLAS--------SLHRVTDLEDDSLQSLDWITRLKIAIGAA 626
C + + ++V++YM GDL ++ V + L L IA A
Sbjct: 85 VCGDGDP-LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIA 143
Query: 627 EGLSYL--HHECNPPLVHRDVQASSILLDDKFEVRLG 661
G+ YL H VHRD+ + L+ V++G
Sbjct: 144 SGMVYLASQH-----FVHRDLATRNCLVGANLLVKIG 175
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 21/152 (13%)
Query: 523 GHSGDLFKGTLAG------GTTVVVK--KVSLHSFKKESYMMELDLFSRV-SHARLVPLL 573
G G + + T G V VK K + H+ +KE+ M EL + S + H +V LL
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 574 GQCLEHETEKLLVYKYMVCGDLASSLHR------VTDLEDDSLQSLDWITRLKIAIGAAE 627
G C L++ +Y GDL + L R + + L + A+
Sbjct: 117 GACTHGG-PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQ 175
Query: 628 GLSYL-HHECNPPLVHRDVQASSILLDDKFEV 658
G+++L C +HRDV A ++LL +
Sbjct: 176 GMAFLASKNC----IHRDVAARNVLLTNGHVA 203
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 27/152 (17%)
Query: 522 KGHSGDLFKGTLAG-----GTTVVVKKV------SLHSFKKESYMMELDLFSRVSHARLV 570
KG+ G + G V VKK+ L F++E ++ + H +V
Sbjct: 20 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL-----KSLQHDNIV 74
Query: 571 PLLGQCLEHETEKL-LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGL 629
G C L L+ +Y+ G L L + + +D I L+ +G+
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-------HKERIDHIKLLQYTSQICKGM 127
Query: 630 SYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
YL +HRD+ +IL++++ V++G
Sbjct: 128 EYLG-TKR--YIHRDLATRNILVENENRVKIG 156
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 2e-08
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 18/145 (12%)
Query: 523 GHSGDLFKGTLAGG----TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQC 576
G G++++G V VK K KE +M E + + H +V L+G
Sbjct: 23 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII 82
Query: 577 LEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC 636
E T ++ + G+L L R +SL+ L + ++ + ++YL
Sbjct: 83 EEEPT--WIIMELYPYGELGHYLER----NKNSLKVLTLV---LYSLQICKAMAYLE-SI 132
Query: 637 NPPLVHRDVQASSILLDDKFEVRLG 661
N VHRD+ +IL+ V+LG
Sbjct: 133 N--CVHRDIAVRNILVASPECVKLG 155
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 3e-08
Identities = 37/192 (19%), Positives = 63/192 (32%), Gaps = 23/192 (11%)
Query: 481 PEGHSTPPPKDPAIVSGVGDSFTYEQLLRATGNFSETNLIKK-----GHSGDLFKGTLAG 535
H+ + + + TY + G GD+ +G
Sbjct: 354 VRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMS 413
Query: 536 G----TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589
V +K K +E ++ E + H +V L+G E+ ++ +
Sbjct: 414 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV--WIIMEL 471
Query: 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASS 649
G+L S L SL I A + L+YL VHRD+ A +
Sbjct: 472 CTLGELRSFLQV----RKFSLDLASLI---LYAYQLSTALAYLE-SKR--FVHRDIAARN 521
Query: 650 ILLDDKFEVRLG 661
+L+ V+LG
Sbjct: 522 VLVSSNDCVKLG 533
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 3e-08
Identities = 42/207 (20%), Positives = 82/207 (39%), Gaps = 30/207 (14%)
Query: 484 HSTPPPKDPAIVSG----VGD-SFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTT 538
H ++ G + + + + Q L G FS +L++ H G
Sbjct: 8 HHHSSGRENLYFQGHMVIIDNKHYLFIQKL-GEGGFSYVDLVEGLHDG----------HF 56
Query: 539 VVVKKVSLHSFKKESYMM-ELDLFSRVSHARLVPLLGQCLEHETEK---LLVYKYMVCGD 594
+K++ H + E D+ +H ++ L+ CL K L+ + G
Sbjct: 57 YALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGT 116
Query: 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD 654
L + + R+ + + + D I L + +G GL +H HRD++ ++ILL D
Sbjct: 117 LWNEIERL--KDKGNFLTEDQI--LWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGD 169
Query: 655 KFEVRL---GSLSELHAQGDSHQNVLT 678
+ + L GS+++ + + LT
Sbjct: 170 EGQPVLMDLGSMNQACIHVEGSRQALT 196
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 3e-08
Identities = 47/221 (21%), Positives = 85/221 (38%), Gaps = 34/221 (15%)
Query: 140 NLSRLNVLYLSGNSLAGNVPATLGEL-----KKLSNLDLSRNLLTGEIPNAISLL----- 189
+ L LS N+L L + +++L+LS N L + + + +
Sbjct: 20 IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIP 79
Query: 190 GNLTRLNLASNFFTGQ----IPSGLYSL-SSIQFLNLSDNALT-----GFIPSEVGNLDK 239
N+T LNL+ NF + + + L ++ +I L+L N + F +
Sbjct: 80 ANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPAS 139
Query: 240 LIELDLSKNSISGSLPLEL-RGLR----NLAKLVISENGL--EG--QLSEGLFPTLDQLQ 290
+ L+L N + EL + L N+ L + N L + +L++ L +
Sbjct: 140 ITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVT 199
Query: 291 VVDLSGNKL--DGALP-ATLFLRPN--LRFLDLSRNNITGS 326
+DLS N L A +F + L+L N + G
Sbjct: 200 SLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 46/245 (18%), Positives = 82/245 (33%), Gaps = 42/245 (17%)
Query: 120 LQVLDLRSCSLSGSIPGSFG-----NLSRLNVLYLSGNSLAGNVPATLGEL-----KKLS 169
+ L+L SL + + L LSGN L+ L + ++
Sbjct: 53 VTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTIT 112
Query: 170 NLDLSRNLLTGEIPNAI-----SLLGNLTRLNLASNFFTGQ----IPSGLYSL-SSIQFL 219
LDL N + + + +L ++T LNL N + + L ++ +++ L
Sbjct: 113 VLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSL 172
Query: 220 NLSDNALT----GFIPSEVGNLDK-LIELDLSKNSISGSLPLEL-RGLRN----LAKLVI 269
NL N L + + ++ + LDLS N + EL + + L +
Sbjct: 173 NLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNL 232
Query: 270 SENGLEGQ----LSEGLFPTLDQLQVVDLSGNKLD--GALPATLFLR-----PNLRFLDL 318
N L G L +L LQ V L + + + +D
Sbjct: 233 CLNCLHGPSLENLKLLK-DSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDK 291
Query: 319 SRNNI 323
+ I
Sbjct: 292 NGKEI 296
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 4e-07
Identities = 39/194 (20%), Positives = 67/194 (34%), Gaps = 29/194 (14%)
Query: 160 ATLGELKKLSNLDLSRNLLTGEIPNAIS--LLGN---LTRLNLASNFFTGQ----IPSGL 210
+++LDLS N L + +T LNL+ N + + L
Sbjct: 16 EFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQIL 75
Query: 211 YSL-SSIQFLNLSDNALT-----GFIPSEVGNLDKLIELDLSKNSISGS----LPLELRG 260
++ +++ LNLS N L+ + + + LDL N S
Sbjct: 76 AAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSN 135
Query: 261 L-RNLAKLVISENGL--EG--QLSEGLFPTLDQLQVVDLSGNKL--DGALP-ATLFLRPN 312
L ++ L + N L + +L + L + ++L GN L A
Sbjct: 136 LPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIP 195
Query: 313 --LRFLDLSRNNIT 324
+ LDLS N +
Sbjct: 196 ASVTSLDLSANLLG 209
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 3e-06
Identities = 42/230 (18%), Positives = 80/230 (34%), Gaps = 41/230 (17%)
Query: 120 LQVLDLRSCSLSG----SIPGSFGNL-SRLNVLYLSGNSLAGNVPATLGEL-----KKLS 169
+ L+LR L + + + +N L L GN+LA A L + ++
Sbjct: 140 ITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVT 199
Query: 170 NLDLSRNLLTGEIPNAIS--LLGN---LTRLNLASNFFTGQ----IPSGLYSLSSIQFLN 220
+LDLS NLL + ++ + LNL N G + SL +Q +
Sbjct: 200 SLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVY 259
Query: 221 LSDNALTGF-------IPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENG 273
L + + + + N+ K+I +D + I S ++ L+ +G
Sbjct: 260 LDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS------HSIPISNLIRELSG 313
Query: 274 LEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNI 323
S L ++ ++ + L + LR + +
Sbjct: 314 KADVPS------LLNQCLIFAQKHQTNIED---LNIPDELRESIQTCKPL 354
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 3e-08
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 24/157 (15%)
Query: 523 GHSGDLFKGTLAGG------TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLG 574
G ++KG L G V +K K +E + E L +R+ H +V LLG
Sbjct: 20 DRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLG 79
Query: 575 QCLEHETEKLLVYKYMVCGDLASSL--------HRVTDLEDDSLQSLDWITRLKIAIGAA 626
+ + +++ Y GDL L TD + +L+ + + A
Sbjct: 80 VVTKDQP-LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIA 138
Query: 627 EGLSYL--HHECNPPLVHRDVQASSILLDDKFEVRLG 661
G+ YL HH +VH+D+ ++L+ DK V++
Sbjct: 139 AGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKIS 170
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 32/162 (19%)
Query: 514 FSETNLIK-----KGHSGDLFKGTLAG-----GTTVVVKKV------SLHSFKKESYMME 557
F E +L KG+ G + G V VK++ F++E ++
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL- 78
Query: 558 LDLFSRVSHARLVPLLGQCLEHETEKL-LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWI 616
+ +V G + L LV +Y+ G L L R LD
Sbjct: 79 ----KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-------HRARLDAS 127
Query: 617 TRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658
L + +G+ YL VHRD+ A +IL++ + V
Sbjct: 128 RLLLYSSQICKGMEYL-GSRR--CVHRDLAARNILVESEAHV 166
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 4e-08
Identities = 25/153 (16%), Positives = 55/153 (35%), Gaps = 19/153 (12%)
Query: 522 KGHSGDLFKGTLAGGTTVVVK--KVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLE 578
+ + K TV VK K + E+++ + H ++ LLG C +
Sbjct: 53 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112
Query: 579 HETEKLLVYKYMVCGDL--------ASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
++ +Y G+L + D+ + + + + A G+
Sbjct: 113 DG-PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGME 171
Query: 631 YL--HHECNPPLVHRDVQASSILLDDKFEVRLG 661
YL +HRD+ A ++L+ + +++
Sbjct: 172 YLASQK-----CIHRDLAARNVLVTENNVMKIA 199
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 5e-08
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 22/157 (14%)
Query: 515 SETNLIKK---GHSGDLFKGTLAGG-----TTVVVK--KVSLHSFKKESYMMELDLFSRV 564
+E IK G G ++KG V +K + + + + E + + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 565 SHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIG 624
+ + LLG CL L+ + M G L + D++ S L +
Sbjct: 75 DNPHVCRLLGICLTSTV--QLITQLMPFGCLLDYVRE----HKDNIGSQY---LLNWCVQ 125
Query: 625 AAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
A+G++YL + LVHRD+ A ++L+ V++
Sbjct: 126 IAKGMNYLE-DRR--LVHRDLAARNVLVKTPQHVKIT 159
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 6e-08
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 242 ELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG 301
EL L N + +P EL ++L + +S N + LS F + QL + LS N+L
Sbjct: 35 ELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRL-R 91
Query: 302 ALPATLFLR-PNLRFLDLSRNNI 323
+P F +LR L L N+I
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGNDI 114
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 7e-07
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLEL-RGLRNL 264
+P G+ + L L N T +P E+ N L +DLS N IS +L + + L
Sbjct: 25 LPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQL 80
Query: 265 AKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL----DGA 302
L++S N L + F L L+++ L GN + +GA
Sbjct: 81 LTLILSYNRLR-CIPPRTFDGLKSLRLLSLHGNDISVVPEGA 121
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 9e-07
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 146 VLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ 205
LYL GN VP L K L+ +DLS N ++ + S + L L L+ N
Sbjct: 35 ELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR-C 92
Query: 206 IPSGLY-SLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKN 248
IP + L S++ L+L N ++ +P +L L L + N
Sbjct: 93 IPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 7e-06
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 108 SIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167
+P+ L ++DL + +S SF N+++L L LS N L P T LK
Sbjct: 45 LVPKEL-SNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKS 103
Query: 168 LSNLDLSRNLLTGEIPN-AISLLGNLTRLNLASN 200
L L L N ++ +P A + L L+ L + +N
Sbjct: 104 LRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGAN 136
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 7e-08
Identities = 37/178 (20%), Positives = 68/178 (38%), Gaps = 27/178 (15%)
Query: 500 DSFTYEQLLRATGNF------SETNLIKK---GHSGDLFKGTLAGGT-----TVVVK--K 543
+A F S K G G+++KG L + V +K K
Sbjct: 23 QGAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK 82
Query: 544 VSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVT 603
++ ++ E + + SH ++ L G +++ +++ +YM G L L
Sbjct: 83 AGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP-MMIITEYMENGALDKFLRE-- 139
Query: 604 DLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
+D L + + G A G+ YL N VHRD+ A +IL++ ++
Sbjct: 140 --KDGEFSVLQ---LVGMLRGIAAGMKYLA-NMN--YVHRDLAARNILVNSNLVCKVS 189
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 8e-08
Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 18/145 (12%)
Query: 523 GHSGDLFKGTLAGG----TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQC 576
G GD+ +G V +K K +E ++ E + H +V L+G
Sbjct: 26 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 85
Query: 577 LEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC 636
E+ ++ + G+L S L SL I A + L+YL
Sbjct: 86 TENPV--WIIMELCTLGELRSFLQV----RKYSLDLASLI---LYAYQLSTALAYLE-SK 135
Query: 637 NPPLVHRDVQASSILLDDKFEVRLG 661
VHRD+ A ++L+ V+LG
Sbjct: 136 R--FVHRDIAARNVLVSSNDCVKLG 158
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 8e-08
Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 20/152 (13%)
Query: 522 KGHSGDLFKGTLAGG---TTVVVK--KVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQ 575
+G+ G + K + +K K + EL++ ++ H ++ LLG
Sbjct: 35 EGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA 94
Query: 576 CLEHETEKLLVYKYMVCGDLASSL--HRVTDLE------DDSLQSLDWITRLKIAIGAAE 627
C L +Y G+L L RV + + + + +L L A A
Sbjct: 95 CEHRG-YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 153
Query: 628 GLSYL-HHECNPPLVHRDVQASSILLDDKFEV 658
G+ YL + +HRD+ A +IL+ + +
Sbjct: 154 GMDYLSQKQF----IHRDLAARNILVGENYVA 181
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 37/177 (20%), Positives = 69/177 (38%), Gaps = 26/177 (14%)
Query: 500 DSFTYEQLLRATGNF------SETNLIKK---GHSGDLFKGTL----AGGTTVVVK--KV 544
D T+E + F + ++ K G G++ G L +V +K KV
Sbjct: 24 DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 545 SLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTD 604
++ ++ E + + H ++ L G + + ++V +YM G L S L
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP-VMIVTEYMENGSLDSFLR---- 138
Query: 605 LEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
I + + G A G+ YL + VHRD+ A +IL++ ++
Sbjct: 139 ---KHDAQFTVIQLVGMLRGIASGMKYLS-DMG--YVHRDLAARNILINSNLVCKVS 189
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 26/153 (16%), Positives = 55/153 (35%), Gaps = 19/153 (12%)
Query: 522 KGHSGDLFKGTLAGGTTVVVK--KVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLE 578
+ + K TV VK K + E+++ + H ++ LLG C +
Sbjct: 99 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158
Query: 579 HETEKLLVYKYMVCGDLASSL--------HRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
++ +Y G+L L D+ + + + + A G+
Sbjct: 159 DG-PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGME 217
Query: 631 YL--HHECNPPLVHRDVQASSILLDDKFEVRLG 661
YL +HRD+ A ++L+ + +++
Sbjct: 218 YLASQK-----CIHRDLAARNVLVTENNVMKIA 245
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 13/155 (8%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARL 569
++ +I G + + V +K+++L + + E+ S+ H +
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 570 VPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE-- 627
V + E LV K + G S L + + + IA E
Sbjct: 76 VSYYT-SFVVKDELWLVMKLLSGG---SVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 628 -GLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
GL YLH +HRDV+A +ILL + V++
Sbjct: 132 EGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIA 163
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 33/151 (21%), Positives = 57/151 (37%), Gaps = 29/151 (19%)
Query: 523 GHSGDLFKGTL-----AGGTTVVVK-------KVSLHSFKKESYMMELDLFSRVSHARLV 570
G G + KG + V +K + S + + + HA +V
Sbjct: 24 GVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI-----GSLDHAHIV 78
Query: 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
LLG C LV +Y+ G L + + +L L + A+G+
Sbjct: 79 RLLGLCPGSSL--QLVTQYLPLGSLLDHVRQ----HRGALGPQL---LLNWGVQIAKGMY 129
Query: 631 YLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
YL E +VHR++ A ++LL +V++
Sbjct: 130 YLE-EHG--MVHRNLAARNVLLKSPSQVQVA 157
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 30/207 (14%), Positives = 70/207 (33%), Gaps = 42/207 (20%)
Query: 468 IANQRGSANVGPVPEGHSTPPPKDPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGD 527
+ Q PVP+ + + + + + I +G +
Sbjct: 1 MDEQSQGMQGPPVPQFQPQKALRPDMGYNTLAN---FRIE----------KKIGRGQFSE 47
Query: 528 LFKGT-LAGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETE 582
+++ L G V +KKV + + + E+DL +++H ++ + E
Sbjct: 48 VYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVI----KYYASFIE 103
Query: 583 KLLVYKYM---VCGDLASSLHRVTDL-----EDDSLQSLDWITRLKIAIGAAEGLSYLHH 634
+ + GDL+ + E + +L L ++H
Sbjct: 104 DNELNIVLELADAGDLSRMIKHFKKQKRLIPER---TVWKYFVQL------CSALEHMHS 154
Query: 635 ECNPPLVHRDVQASSILLDDKFEVRLG 661
++HRD++ +++ + V+LG
Sbjct: 155 RR---VMHRDIKPANVFITATGVVKLG 178
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 21/146 (14%)
Query: 523 GHSGDLFKGTL---AGGTTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCL 577
G+ G + +G V +K K E M E + ++ + +V L+G C
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ 80
Query: 578 EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL--HHE 635
+LV + G L L + + ++ + G+ YL +
Sbjct: 81 AEAL--MLVMEMAGGGPLHKFLV-------GKREEIPVSNVAELLHQVSMGMKYLEEKN- 130
Query: 636 CNPPLVHRDVQASSILLDDKFEVRLG 661
VHRD+ A ++LL ++ ++
Sbjct: 131 ----FVHRDLAARNVLLVNRHYAKIS 152
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 2e-07
Identities = 55/308 (17%), Positives = 90/308 (29%), Gaps = 47/308 (15%)
Query: 34 RSSLGLRSRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLT 93
+ + W W+ + + + +
Sbjct: 29 LLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAE 88
Query: 94 LLSSFNASGLSLPGSIP-----EWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLY 148
S F + L S+ + LQ L L LS I + S L L
Sbjct: 89 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148
Query: 149 LSGNSLAGN--VPATLGELKKLSNLDLSR--NLLTGEIPNAIS-LLGNLTRLNLASNFFT 203
LSG S + L +L L+LS + + A++ + +T+LNL
Sbjct: 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL------ 202
Query: 204 GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK-NSISGSLPLELRGLR 262
SG NL + L+ + L+ LDLS + E L
Sbjct: 203 ----SGYRK-------NLQKSDLSTLVR----RCPNLVHLDLSDSVMLKNDCFQEFFQLN 247
Query: 263 NLAKLV------ISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFL 316
L L I L + L+ + + G DG L L+ L L
Sbjct: 248 YLQHLSLSRCYDIIPETLL------ELGEIPTLKTLQVFGIVPDGTLQL---LKEALPHL 298
Query: 317 DLSRNNIT 324
++ ++ T
Sbjct: 299 QINCSHFT 306
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 29/149 (19%), Positives = 56/149 (37%), Gaps = 33/149 (22%)
Query: 523 GHSGDLFKGTLAGG---TTVVVK--------KVSLHSFKKESYMMELDLFSRVSHARLVP 571
G+ G + KG TV VK E+ +M ++ + +V
Sbjct: 28 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM-----QQLDNPYIVR 82
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
++G C +LV + G L L + ++D ++ +++ + G+ Y
Sbjct: 83 MIGICEAESW--MLVMEMAELGPLNKYLQQNRHVKDKNI--------IELVHQVSMGMKY 132
Query: 632 L--HHECNPPLVHRDVQASSILLDDKFEV 658
L + VHRD+ A ++LL +
Sbjct: 133 LEESN-----FVHRDLAARNVLLVTQHYA 156
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 514 FSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSL-HSFKKESYMMELDLFSRVSHARLVP 571
++ I +G SG ++ +A G V +++++L KKE + E+ + + +V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
L L E +V +Y+ G L TD+ ++ I + + L +
Sbjct: 82 YLDSYL-VGDELWVVMEYLAGGSL-------TDVVTETCMDEGQIAA--VCRECLQALEF 131
Query: 632 LHHECNPPLVHRDVQASSILLDDKFEVRL 660
LH ++HRD+++ +ILL V+L
Sbjct: 132 LHSN---QVIHRDIKSDNILLGMDGSVKL 157
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 32/166 (19%)
Query: 522 KGHSGDLFKGTLAGG------TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLL 573
+G G + K T TTV VK K + + + E ++ +V+H ++ L
Sbjct: 33 EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLY 92
Query: 574 GQCLEHETEKLLVYKYMVCGDLASSL--HR--------------VTDLEDDSLQSLDWIT 617
G C + LL+ +Y G L L R + L+ ++L
Sbjct: 93 GACSQDG-PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 618 RLKIAIGAAEGLSYL--HHECNPPLVHRDVQASSILLDDKFEVRLG 661
+ A ++G+ YL LVHRD+ A +IL+ + ++++
Sbjct: 152 LISFAWQISQGMQYLAEMK-----LVHRDLAARNILVAEGRKMKIS 192
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 3e-07
Identities = 35/111 (31%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 121 QVLDLRSCSLSGSIP--GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLL 178
L L L I G FG L L L L N L G P + L L N +
Sbjct: 32 TELLLNDNELG-RISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI 90
Query: 179 TGEIPNAI-SLLGNLTRLNLASNFFTGQ---IPSGLY-SLSSIQFLNLSDN 224
EI N + L L LNL N Q + G + L+S+ LNL+ N
Sbjct: 91 K-EISNKMFLGLHQLKTLNLYDN----QISCVMPGSFEHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 1e-06
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 146 VLYLSGNSLAGNVP-ATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG 204
L L+ N L G L L L+L RN LTG PNA ++ L L N
Sbjct: 33 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK- 91
Query: 205 QIPSGLY-SLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKN 248
+I + ++ L ++ LNL DN ++ + +L+ L L+L+ N
Sbjct: 92 EISNKMFLGLHQLKTLNLYDNQISC-VMPGSFEHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSISGSLPLEL-RGLRN 263
IP + L L+DN L + G L L++L+L +N ++ + G +
Sbjct: 23 IPRDI--PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASH 79
Query: 264 LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL----DGA 302
+ +L + EN ++ ++S +F L QL+ ++L N++ G+
Sbjct: 80 IQELQLGENKIK-EISNKMFLGLHQLKTLNLYDNQISCVMPGS 121
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175
RLP L L+L+ L+G P +F S + L L N + L +L L+L
Sbjct: 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111
Query: 176 NLLTGEIPN-AISLLGNLTRLNLASN 200
N ++ + + L +LT LNLASN
Sbjct: 112 NQISC-VMPGSFEHLNSLTSLNLASN 136
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 11/143 (7%)
Query: 522 KGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKE--SYMMELD-LFSRVSHARLVPLLGQCL 577
+G G + K G + VK++ +KE +M+LD + +V G L
Sbjct: 32 RGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG-AL 90
Query: 578 EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECN 637
E + + + M V + DD + + + KI + + L++L
Sbjct: 91 FREGDCWICMELM-STSFDKFYKYVYSVLDDVI-PEEILG--KITLATVKALNHLKENLK 146
Query: 638 PPLVHRDVQASSILLDDKFEVRL 660
++HRD++ S+ILLD ++L
Sbjct: 147 --IIHRDIKPSNILLDRSGNIKL 167
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 36/202 (17%), Positives = 70/202 (34%), Gaps = 36/202 (17%)
Query: 479 PVPEGHSTPPPKDPAIVSGVGDSFTY---EQLLRATGNFSETNLIK------KGHSGDLF 529
P P ++P P + + E+L NL+ G+ G +
Sbjct: 294 PEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVR 353
Query: 530 KGTLAGG---TTVVVK-------KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEH 579
+G V +K K +E+ +M ++ + +V L+G C
Sbjct: 354 QGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIM-----HQLDNPYIVRLIGVCQAE 408
Query: 580 ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPP 639
+LV + G L L + + ++ + G+ YL E N
Sbjct: 409 AL--MLVMEMAGGGPLHKFLV-------GKREEIPVSNVAELLHQVSMGMKYLE-EKN-- 456
Query: 640 LVHRDVQASSILLDDKFEVRLG 661
VHR++ A ++LL ++ ++
Sbjct: 457 FVHRNLAARNVLLVNRHYAKIS 478
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 4e-07
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 22/161 (13%)
Query: 511 TGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARL 569
G F L+ G G ++KG + G +K + + ++E E+++ + SH R
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRN 82
Query: 570 VP------LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAI 623
+ + + + LV ++ G VTDL ++ + + IA
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGS-------VTDLIKNTKGNT--LKEEWIAY 133
Query: 624 ---GAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
GLS+LH ++HRD++ ++LL + EV+L
Sbjct: 134 ICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLV 171
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 4e-07
Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 24/158 (15%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHAR 568
+ I +G G G V+K++++ +E E+ + + + H
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 569 LVPLLGQCLEHETEKLLVY---KYMVCGDLASSL--HRVTDLEDDSLQSLDWITRLKIAI 623
+V Q E E +Y Y GDL + + ++D Q LDW ++
Sbjct: 85 IV----QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQED--QILDWFVQI---- 134
Query: 624 GAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
L ++H + ++HRD+++ +I L V+LG
Sbjct: 135 --CLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLG 167
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 4e-07
Identities = 33/152 (21%), Positives = 59/152 (38%), Gaps = 17/152 (11%)
Query: 522 KGHSGDLFKGTLAGGTTVVVK--KVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLE 578
+ L K T V VK K + E+++ + H ++ LLG C +
Sbjct: 87 LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146
Query: 579 HETEKLLVYKYMVCGDLASSL--HRVTDLEDDSLQSLDWITRL------KIAIGAAEGLS 630
++ +Y G+L L R LE S + +L A A G+
Sbjct: 147 DG-PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGME 205
Query: 631 YL-HHECNPPLVHRDVQASSILLDDKFEVRLG 661
YL +C +HRD+ A ++L+ + +++
Sbjct: 206 YLASKKC----IHRDLAARNVLVTEDNVMKIA 233
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 51.9 bits (123), Expect = 4e-07
Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 37/187 (19%)
Query: 85 AVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFG----- 139
+D++ L L + LS+ P L+ L++ S L S+
Sbjct: 167 VLDAMPLLNNLKIKGTNNLSIGKK-------PRPNLKSLEIISGGLPDSVVEDILGSDLP 219
Query: 140 NLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199
NL +L LY+ + PN L L +
Sbjct: 220 NLEKLV-LYVGVEDYGFDGDMN----------VFRPLFSKDRFPN-------LKWLGIVD 261
Query: 200 NFFTGQIPSGLYS---LSSIQFLNLSDNALTGF----IPSEVGNLDKLIELDLSKNSISG 252
+ L ++ +++S LT + V + L +++ N +S
Sbjct: 262 AEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321
Query: 253 SLPLELR 259
+ EL+
Sbjct: 322 EMKKELQ 328
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 49.6 bits (117), Expect = 2e-06
Identities = 28/155 (18%), Positives = 57/155 (36%), Gaps = 17/155 (10%)
Query: 187 SLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG--NLDKLIELD 244
+L + LN T + G +++ L + L + ++ +L L +L
Sbjct: 166 PVLDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLV 225
Query: 245 L---SKNSISGSLP------LELRGLRNLAKLVISENGLEGQLSEGLF--PTLDQLQVVD 293
L ++ NL L I + + + E L QL+ +D
Sbjct: 226 LYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMD 285
Query: 294 LSGNKL--DGA--LPATLFLRPNLRFLDLSRNNIT 324
+S L +GA L + +L+F+++ N ++
Sbjct: 286 ISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 47.3 bits (111), Expect = 1e-05
Identities = 29/218 (13%), Positives = 61/218 (27%), Gaps = 36/218 (16%)
Query: 105 LPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGN-LSRLNVLYLSGNSLAGNVPATLG 163
+ + ++ + +D +S L + +L N+
Sbjct: 131 IVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLSIGKK 190
Query: 164 ELKKLSNLDLSRNLLTGEIPNAI--SLLGNLTRLNLASNFFTGQIPSGLYSLSSI----- 216
L +L++ L + I S L NL +L L + +
Sbjct: 191 PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDR 250
Query: 217 ----QFLNLSDNALTGFIPS---EVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVI 269
++L + D + E L +L +D+S ++ G R L
Sbjct: 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE------GARLLLDH-- 302
Query: 270 SENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATL 307
+ L+ +++ N L + L
Sbjct: 303 -------------VDKIKHLKFINMKYNYLSDEMKKEL 327
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 5e-07
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG 180
L+L S L G F L++L L LS N + +L KL+ L L N L
Sbjct: 31 TRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ- 89
Query: 181 EIPNAI-SLLGNLTRLNLASNFFTGQIPSGLY-SLSSIQFLNLSDN 224
+PN + L L L L +N +P G++ L+S+Q + L N
Sbjct: 90 SLPNGVFDKLTQLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 5e-05
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 13/124 (10%)
Query: 193 TRLNLASNFFTGQIPSGLY-SLSSIQFLNLSDNALTGFIPSEV-GNLDKLIELDLSKNSI 250
TRL L SN +P G++ L+ + L+LS N + +P V L KL L L +N +
Sbjct: 31 TRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENKL 88
Query: 251 SGSLPLELRG----LRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPAT 306
SLP G L L +L + N L+ + +G+F L LQ + L N D + P
Sbjct: 89 Q-SLP---NGVFDKLTQLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPRI 143
Query: 307 LFLR 310
+L
Sbjct: 144 DYLS 147
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 5e-07
Identities = 42/190 (22%), Positives = 66/190 (34%), Gaps = 32/190 (16%)
Query: 481 PEGHSTPPPKDPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHS--GDLFKGT-LAGGT 537
H + S + + YE L +I KG + G
Sbjct: 4 HHHHHMENLYFQGMSSFLPEGGCYELL----------TVIGKGFEDLMTVNLARYKPTGE 53
Query: 538 TVVVKKVSLHSFKKESY---MMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGD 594
V V++++L + E EL + +H +VP + E +V +M G
Sbjct: 54 YVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRA-TFIADNELWVVTSFMAYG- 111
Query: 595 LASSLHRVTDLEDDSLQSLDWITRLKIAI---GAAEGLSYLHHECNPPLVHRDVQASSIL 651
S+ + D + L IA G + L Y+HH VHR V+AS IL
Sbjct: 112 --SAKDLICTHFMDGM------NELAIAYILQGVLKALDYIHHM---GYVHRSVKASHIL 160
Query: 652 LDDKFEVRLG 661
+ +V L
Sbjct: 161 ISVDGKVYLS 170
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 5e-07
Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 19/146 (13%)
Query: 523 GHSGDLFKGTLA-----GGTTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQ 575
G G ++KG V +K + + + + E + + V + + LLG
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 576 CLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHE 635
CL L+ + M G L + + ++ L + A+G++YL +
Sbjct: 86 CLTSTV--QLITQLMPFGCLLDYVR-------EHKDNIGSQYLLNWCVQIAKGMNYLE-D 135
Query: 636 CNPPLVHRDVQASSILLDDKFEVRLG 661
LVHRD+ A ++L+ V++
Sbjct: 136 RR--LVHRDLAARNVLVKTPQHVKIT 159
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 5e-07
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 522 KGHSGDLFKGTLAG------GTTVVVK--KVSLHSFKKESYMMELDLFSRV-SHARLVPL 572
G G + + T G TV VK K S H ++E+ M EL + S + +H +V L
Sbjct: 33 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 92
Query: 573 LGQCLEHETEKLLVYKYMVCGDLASSL--HR--------VTDLEDDSLQSLDWITRLKIA 622
LG C L++ +Y GDL + L R + +D +LD L +
Sbjct: 93 LGACTIGG-PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFS 151
Query: 623 IGAAEGLSYLH-HECNPPLVHRDVQASSILLDDKFEV 658
A+G+++L C +HRD+ A +ILL
Sbjct: 152 YQVAKGMAFLASKNC----IHRDLAARNILLTHGRIT 184
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 6e-07
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 21/155 (13%)
Query: 519 LIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLG 574
I G G K + G +V K++ S K+ + E++L + H +V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 575 QCLEHETEKL-LVYKYMVCGDLASSLHRVTDL-----EDDSLQSLDWITRLKIAIGAAEG 628
+ ++ L +V +Y GDLAS + + T E+ L +T+L
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE---FVLRVMTQL------TLA 123
Query: 629 LSYLHHECNPPL--VHRDVQASSILLDDKFEVRLG 661
L H + +HRD++ +++ LD K V+LG
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG 158
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 6e-07
Identities = 31/152 (20%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 514 FSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVP 571
+ + G G ++K G K + S + E Y++E+++ + H +V
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAI---GAAEG 628
LLG H+ + ++ ++ G V + + + L T +I + E
Sbjct: 81 LLG-AYYHDGKLWIMIEFCPGGA-------VDAIMLELDRGL---TEPQIQVVCRQMLEA 129
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660
L++LH + ++HRD++A ++L+ + ++RL
Sbjct: 130 LNFLHSK---RIIHRDLKAGNVLMTLEGDIRL 158
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 6e-07
Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 32/162 (19%)
Query: 526 GDLFKGTLAGG------TTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCL 577
G +F+ G T V VK K + + + E L + + +V LLG C
Sbjct: 61 GRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 120
Query: 578 EHETEKLLVYKYMVCGDLASSL--HR--------------VTDLEDDSLQSLDWITRLKI 621
+ L+++YM GDL L + L +L I
Sbjct: 121 VGKP-MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCI 179
Query: 622 AIGAAEGLSYL--HHECNPPLVHRDVQASSILLDDKFEVRLG 661
A A G++YL VHRD+ + L+ + V++
Sbjct: 180 ARQVAAGMAYLSERK-----FVHRDLATRNCLVGENMVVKIA 216
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 6e-07
Identities = 44/293 (15%), Positives = 91/293 (31%), Gaps = 44/293 (15%)
Query: 51 CRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTL-----LSSFNASGLSL 105
CR W + + + + ++ RL+ RF +L +L L + FN +
Sbjct: 41 CRRWFKIDSETRE--HVTMALCYTATPDRLSRRF--PNLRSLKLKGKPRAAMFNLIPENW 96
Query: 106 PGSIPEWFGY---RLPALQVLDLRSCSLSGS-----IPGSFGNLSRLNVLYLSGNSLAGN 157
G + W L L+ + R +S +L L + SG + G
Sbjct: 97 GGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDG- 155
Query: 158 VPATLGELKKLSNLDLSRNLLTGEIPNAISLLG----NLTRLNLASNFFTGQIPSGLYSL 213
+ + + +K+ L + + + + + L +L LN
Sbjct: 156 LLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNF---------------- 199
Query: 214 SSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENG 273
+F +S L N L+ + + I + + NL +
Sbjct: 200 YMTEFAKISPKDLETI----ARNCRSLVSVKVGDFEILELVGF-FKAAANLEEFCGGSLN 254
Query: 274 LEGQLSEGLFPTLDQLQVVDLSGNKL-DGALPATLFLRPNLRFLDLSRNNITG 325
+ + E + ++ L + + +P +R LDL +
Sbjct: 255 EDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLET 307
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 5e-05
Identities = 34/226 (15%), Positives = 72/226 (31%), Gaps = 32/226 (14%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGEL---------- 165
+ P L+VL+ R+ + +L L + + + G +
Sbjct: 316 KCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQ 375
Query: 166 --KKLSNLDLSRNLLTGEIPNAISL-LGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLS 222
++L + + + +T E +I L NL L L + ++
Sbjct: 376 GCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV-------------LLDREE--RIT 420
Query: 223 DNALTGFIPSEVGNLDKLIELDLSKNSIS---GSLPLELRGLRNLAKLVISENGLEGQLS 279
D L + S + KL L + N+ +++ G +
Sbjct: 421 DLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGL 480
Query: 280 EGLFPTLDQLQVVDLSGNKL-DGALPATLFLRPNLRFLDLSRNNIT 324
LQ +++ G + A+ A + P+LR+L + +
Sbjct: 481 MEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 8e-07
Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 19/154 (12%)
Query: 511 TGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARL 569
F + +G G ++K G V +K+V + S + + E+ + + +
Sbjct: 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHV 86
Query: 570 VPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAI---GAA 626
V G T+ +V +Y G + +D+ ++L +IA
Sbjct: 87 VKYYGSYF-KNTDLWIVMEYCGAGSV-------SDIIRLRNKTLT---EDEIATILQSTL 135
Query: 627 EGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660
+GL YLH +HRD++A +ILL+ + +L
Sbjct: 136 KGLEYLHFM---RKIHRDIKAGNILLNTEGHAKL 166
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 8e-07
Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 30/153 (19%)
Query: 522 KGHSGDLFKGTLAGG----TTVVVK---------KVSLHSFKKESYMMELDLFSRVSHAR 568
G G + +G +V VK ++ F +E M + H
Sbjct: 28 DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM-----HSLDHRN 82
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
L+ L G L +V + G L L + T + A+ AEG
Sbjct: 83 LIRLYGVVLTPPM--KMVTELAPLGSLLDRLRK----HQGHFLL---GTLSRYAVQVAEG 133
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
+ YL +HRD+ A ++LL + V++G
Sbjct: 134 MGYLE-SKR--FIHRDLAARNLLLATRDLVKIG 163
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 9e-07
Identities = 32/149 (21%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 514 FSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSL-HSFKKESYMMELDLFSRVSHARLVP 571
I +G +G + G V VK + L ++E E+ + H +V
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
+ L E ++ +++ G L TD+ + + I + + L+Y
Sbjct: 107 MYKSYL-VGEELWVLMEFLQGGAL-------TDIVSQVRLNEEQIAT--VCEAVLQALAY 156
Query: 632 LHHECNPPLVHRDVQASSILLDDKFEVRL 660
LH + ++HRD+++ SILL V+L
Sbjct: 157 LHAQ---GVIHRDIKSDSILLTLDGRVKL 182
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 47/200 (23%), Positives = 77/200 (38%), Gaps = 30/200 (15%)
Query: 470 NQRGSANVGPVPEGHSTPPPKDPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLF 529
N + P+P G KDP + FS+ I G G ++
Sbjct: 19 NLYFQGAMDPMPAGGRAGSLKDPDVAELFFKD-------DPEKLFSDLREIGHGSFGAVY 71
Query: 530 KGT-LAGGTTVVVKKVSLHSFKKE----SYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584
+ V +KK+S + + E+ ++ H + G L E
Sbjct: 72 FARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-REHTAW 130
Query: 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAI---GAAEGLSYLHHECNPPLV 641
LV +Y + +DL + + L ++IA GA +GL+YLH ++
Sbjct: 131 LVMEYCLGS--------ASDLLEVHKKPLQ---EVEIAAVTHGALQGLAYLHSH---NMI 176
Query: 642 HRDVQASSILLDDKFEVRLG 661
HRDV+A +ILL + V+LG
Sbjct: 177 HRDVKAGNILLSEPGLVKLG 196
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 15/143 (10%)
Query: 522 KGHSGDLFKGTLAGGTTVVVKKV---SLHSFKKESYMMELD-LFSRVSHARLVPLLGQCL 577
G G ++K V+ K S + + + +M+LD + +V G
Sbjct: 35 SGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG-TF 93
Query: 578 EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECN 637
T+ + + M + + L K+ + + L YL +
Sbjct: 94 ITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG--------KMTVAIVKALYYLKEKHG 145
Query: 638 PPLVHRDVQASSILLDDKFEVRL 660
++HRDV+ S+ILLD++ +++L
Sbjct: 146 --VIHRDVKPSNILLDERGQIKL 166
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 514 FSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLV 570
F++ I KG G++FKG V +K + L + E E+ + S+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAI---GAAE 627
G +T+ ++ +Y+ G L E +IA +
Sbjct: 84 KYYG-SYLKDTKLWIIMEYLGGGSALDLLEPGPLDET------------QIATILREILK 130
Query: 628 GLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
GL YLH E +HRD++A+++LL + EV+L
Sbjct: 131 GLDYLHSE---KKIHRDIKAANVLLSEHGEVKLA 161
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 32/167 (19%), Positives = 65/167 (38%), Gaps = 23/167 (13%)
Query: 508 LRATGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSH 566
LR +F E ++ +G G + K +KK+ K + + E+ L + ++H
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH 61
Query: 567 ARLVPLLGQCLEHETEKLLVYK-------YMV---C--GDLASSLHRVTDLEDDSLQSLD 614
+V LE + ++ C G L +H + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD-EYWR 120
Query: 615 WITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
++ E LSY+H + ++HRD++ +I +D+ V++G
Sbjct: 121 LFRQI------LEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIG 158
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 29/148 (19%)
Query: 519 LIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK-ESYMMELDLFSRVSHARLVPLLGQC 576
++ KG G ++ G L+ + +K++ + + E+ L + H +V LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG-- 86
Query: 577 LEHETEKLLVY-KYMVCGDLASSL-HRVTDLEDD-------SLQSLDWITRLKIAIGAAE 627
E + ++ + + G L++ L + L+D+ + Q L E
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-------------E 133
Query: 628 GLSYLHHECNPPLVHRDVQASSILLDDK 655
GL YLH +VHRD++ ++L++
Sbjct: 134 GLKYLHDNQ---IVHRDIKGDNVLINTY 158
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 16/145 (11%)
Query: 522 KGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKE--SYMMELD-LFSRVSHARLVPLLGQCL 577
+G G + K + G + VK++ +E +M+LD V V G L
Sbjct: 17 RGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG-AL 75
Query: 578 EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSL--DWITRLKIAIGAAEGLSYLHHE 635
E + + + M +SL + D Q++ D + KIA+ + L +LH +
Sbjct: 76 FREGDVWICMELM-----DTSLDKFYKQVIDKGQTIPEDILG--KIAVSIVKALEHLHSK 128
Query: 636 CNPPLVHRDVQASSILLDDKFEVRL 660
+ ++HRDV+ S++L++ +V++
Sbjct: 129 LS--VIHRDVKPSNVLINALGQVKM 151
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 30/162 (18%)
Query: 522 KGHSGDLFKGTLAGG------TTVVVK--KVSLHSFKKESYMMELDLFSRV-SHARLVPL 572
G G + T G V VK K S ++E+ M EL + +++ SH +V L
Sbjct: 55 SGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNL 114
Query: 573 LGQCLEHETEKLLVYKYMVCGDLASSL--HRVTDLEDDSLQSLDWITR------------ 618
LG C L+++Y GDL + L R ED+
Sbjct: 115 LGACTLSG-PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFED 173
Query: 619 -LKIAIGAAEGLSYL-HHECNPPLVHRDVQASSILLDDKFEV 658
L A A+G+ +L C VHRD+ A ++L+ V
Sbjct: 174 LLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVV 211
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 4e-06
Identities = 34/168 (20%), Positives = 65/168 (38%), Gaps = 24/168 (14%)
Query: 509 RATGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKE--SYMMELDLFSRVS 565
R +F + +G G +F+ +K++ L + + M E+ +++
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 566 HARLVPLLGQCLE------HETEKLLVYKYMV---C--GDLASSL-HRVTDLEDDSLQSL 613
H +V LE + VY Y+ C +L + R T E + L
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 614 DWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
++ AE + +LH + L+HRD++ S+I V++G
Sbjct: 122 HIFLQI------AEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVG 160
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 48.5 bits (115), Expect = 5e-06
Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 4/108 (3%)
Query: 554 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSL 613
++ DL +++ + + + +L + + +SL
Sbjct: 150 FIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH-KSL 208
Query: 614 DWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
RL++ + L+ LHH LVH ++ I+LD + V L
Sbjct: 209 VHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLT 253
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 48.5 bits (115), Expect = 5e-06
Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 4/107 (3%)
Query: 555 MMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLD 614
+ DL +++ + + + +L + + +SL
Sbjct: 146 IFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH-KSLV 204
Query: 615 WITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
RL++ + L+ LHH LVH ++ I+LD + V L
Sbjct: 205 HHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLT 248
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 47.6 bits (112), Expect = 8e-06
Identities = 28/191 (14%), Positives = 53/191 (27%), Gaps = 41/191 (21%)
Query: 508 LRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKK---ESYMMELDLFSRV 564
T I +G G++F+ A T V +K +++ ++ +
Sbjct: 16 CLPTEKLQRCEKIGEGVFGEVFQTI-ADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEI 74
Query: 565 SHARLVPLLGQCLEHETEKLLVYK--YMVCGDLASSLHRV-------------------- 602
++ + LL + + TE + + V G L +
Sbjct: 75 IISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKD 134
Query: 603 -------------TDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASS 649
DLE + T I L+ HRD+ +
Sbjct: 135 DQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLR--FEHRDLHWGN 192
Query: 650 ILLDDKFEVRL 660
+LL +L
Sbjct: 193 VLLKKTSLKKL 203
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 45/227 (19%), Positives = 75/227 (33%), Gaps = 39/227 (17%)
Query: 117 LPALQVLDLRSCSL-SGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGEL-----KKLSN 170
LP ++LD + S LS L L L+G + + + L
Sbjct: 46 LPPSELLDHLFFHYEFQNQRFSAEVLSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDE 105
Query: 171 LDLSRNLLTGEIPNAI-SLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGF 229
++L+ L + + +L L N P L + L +
Sbjct: 106 VNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG---PEACKDLRDL----LLHDQCQ-- 156
Query: 230 IPSEVGNLDKLIELDLSKNSISGS----LPLELRGLRNLAKLVISENGL--EG--QLSEG 281
+ L LS N ++ + L L G ++ L + GL EG L+
Sbjct: 157 ----------ITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQ 206
Query: 282 LFPTLDQLQVVDLSGNKL--DGALPATLFLRPN--LRFLDLSRNNIT 324
L QLQ ++++ N AL R + L L L N ++
Sbjct: 207 L-DRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 1e-05
Identities = 31/165 (18%), Positives = 66/165 (40%), Gaps = 17/165 (10%)
Query: 536 GTTVVVKKVSLHSFKKESYMM-ELDLFSRVS-HARLVPLLG------QCLEHETEKLLVY 587
G +K++ + +K ++ E+ ++S H +V + + + L+
Sbjct: 53 GREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112
Query: 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQA 647
+ G L L ++ S L T LKI + ++H PP++HRD++
Sbjct: 113 TELCKGQLVEFLKKME-----SRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKV 166
Query: 648 SSILLDDKFEVRL---GSLSELHAQGDSHQNVLTRFLWRQLYQSC 689
++LL ++ ++L GS + + D + R L +
Sbjct: 167 ENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 34/183 (18%), Positives = 62/183 (33%), Gaps = 22/183 (12%)
Query: 479 PVPEGHSTPPPKDPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTT 538
E P S E + +S I G S +F+
Sbjct: 23 AKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQI 82
Query: 539 VVVKKVSLHSFKK---ESYMMELDLFSRVSH--ARLVPLLGQCLEHETEKLLVYKYMVC- 592
+K V+L +SY E+ +++ +++ L ++E +Y M C
Sbjct: 83 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL----YDYEITDQYIYMVMECG 138
Query: 593 -GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSIL 651
DL S L + +S+D R E + +H +VH D++ ++ L
Sbjct: 139 NIDLNSWLKKK--------KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFL 187
Query: 652 LDD 654
+ D
Sbjct: 188 IVD 190
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 28/169 (16%)
Query: 509 RATGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHA 567
R +F E LI G G +FK G T V+K+V E E+ +++ H
Sbjct: 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKY---NNEKAEREVKALAKLDHV 64
Query: 568 RLVPLLGQCLEHETEKLLVYK----------YMV---C--GDLASSLHRVTDLEDDSLQS 612
+V G + + K ++ C G L + + + D + +
Sbjct: 65 NIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 124
Query: 613 LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
L+ ++ +G+ Y+H + L++RD++ S+I L D +V++G
Sbjct: 125 LELFEQI------TKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIG 164
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 8e-05
Identities = 15/139 (10%), Positives = 37/139 (26%), Gaps = 4/139 (2%)
Query: 540 VVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSL 599
++ + + + ++ D + S L ++ L+ DL
Sbjct: 119 LLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLF 178
Query: 600 HRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659
+ + + + + L + LVH ++ + +
Sbjct: 179 STLDFVYVFR-GDEGILALHILTAQLIRLAANLQSKG---LVHGHFTPDNLFIMPDGRLM 234
Query: 660 LGSLSELHAQGDSHQNVLT 678
LG +S L G
Sbjct: 235 LGDVSALWKVGTRGPASSV 253
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 1e-04
Identities = 24/175 (13%), Positives = 53/175 (30%), Gaps = 16/175 (9%)
Query: 485 STPPPKDPAIVSGVGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKV 544
P K LL G F++ +G D V KV
Sbjct: 50 KLPAIKPKTEFQLGSKLVYVHHLL-GEGAFAQVYEATQGDLNDAKNKQK------FVLKV 102
Query: 545 SLHSFKKESYMM--ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRV 602
+ E Y+ ++ + + +LV + G L L+ +
Sbjct: 103 QKPANPWEFYIGTQLMERLKPSMQHMFMKFYS-AHLFQNGSVLVGELYSYGTL---LNAI 158
Query: 603 TDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657
++ + + + A+ + +H + ++H D++ + +L + F
Sbjct: 159 NLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFL 210
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 22/144 (15%)
Query: 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKK---ESYMMELDLFSRVSH--ARLVPL 572
I G S +F+ +K V+L +SY E+ +++ +++ L
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74
Query: 573 LGQCLEHETEKLLVYKYMVC--GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
++E +Y M C DL S L + +S+D R E +
Sbjct: 75 ----YDYEITDQYIYMVMECGNIDLNSWLKKK--------KSIDPWERKSYWKNMLEAVH 122
Query: 631 YLHHECNPPLVHRDVQASSILLDD 654
+ H+ +VH D++ ++ L+ D
Sbjct: 123 TI-HQHG--IVHSDLKPANFLIVD 143
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 3e-04
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Query: 522 KGHSGDLFKGTLAG------GTTVVVK--KVSLHSFKKESYMMELDLFSRV-SHARLVPL 572
+G G + + G TV VK K + + M EL + + H +V L
Sbjct: 32 RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91
Query: 573 LGQCLEHETEKLLVYKYMVCGDLASSLHR 601
LG C + +++ ++ G+L++ L
Sbjct: 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRS 120
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 22/144 (15%)
Query: 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKK---ESYMMELDLFSRVSH--ARLVPL 572
I G S +F+ +K V+L +SY E+ +++ +++ L
Sbjct: 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93
Query: 573 LGQCLEHETEKLLVYKYMVC--GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
++E +Y M C DL S L + +S+D R E +
Sbjct: 94 ----YDYEITDQYIYMVMECGNIDLNSWLKKK--------KSIDPWERKSYWKNMLEAVH 141
Query: 631 YLHHECNPPLVHRDVQASSILLDD 654
+ H+ +VH D++ ++ L+ D
Sbjct: 142 TI-HQHG--IVHSDLKPANFLIVD 162
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 693 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.98 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.98 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.98 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.98 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.97 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.97 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.97 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.97 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.97 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.97 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 99.97 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.97 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.97 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.97 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.97 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.97 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.97 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.97 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.97 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.97 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.96 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.96 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.96 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 99.96 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.96 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 99.96 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.96 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.96 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.96 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.96 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.96 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 99.96 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.96 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.96 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.95 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.95 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.95 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.95 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.95 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.95 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.95 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.95 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.95 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.94 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.94 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.94 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.94 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.94 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.94 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.94 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.94 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.94 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.94 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.94 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.94 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.94 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.94 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.94 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.94 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.94 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.94 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.94 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.94 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.94 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.94 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.94 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.94 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.94 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.94 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.94 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.94 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.94 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.94 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.94 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.94 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.94 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.94 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.94 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.93 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.93 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.93 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.93 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.93 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.93 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.93 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.93 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.93 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.93 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.93 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.93 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.93 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.93 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.93 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.93 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.93 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.93 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.93 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.93 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.93 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.93 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.93 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.93 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.93 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.93 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.93 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.93 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.93 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.93 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.93 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.93 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.93 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.93 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.93 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.93 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.93 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.93 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.93 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.93 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.93 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.93 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.93 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.93 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.93 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.93 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.93 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.93 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.93 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.93 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.93 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.93 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.93 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.93 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.92 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.92 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.92 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.92 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.92 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.92 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.92 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.92 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.92 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.92 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.92 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.92 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.92 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.92 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.92 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.92 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.92 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.92 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.92 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.92 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.92 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.92 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.92 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.92 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.92 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.92 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.92 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.92 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.92 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.92 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.92 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.92 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.92 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.92 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.92 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.92 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.92 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.92 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.92 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.92 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.92 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.92 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.92 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.92 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.92 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.92 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.92 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.92 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.92 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.92 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.92 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.92 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.92 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.92 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.92 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.92 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.92 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.92 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.92 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.92 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.92 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.92 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.92 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.92 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.92 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.92 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.92 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.92 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.92 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.92 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.91 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.91 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.91 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.91 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.91 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.91 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.91 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.91 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.91 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.91 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.91 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.91 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.91 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.91 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.91 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.91 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.91 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.91 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.91 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.91 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.91 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.91 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.91 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.91 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.91 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.91 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.91 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.91 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.91 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.91 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.91 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.91 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.91 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.91 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.91 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.91 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.91 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.91 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.91 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.91 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.91 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.91 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.91 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.91 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.91 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.91 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.91 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.91 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.91 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.91 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.91 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.91 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.9 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.9 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.9 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.9 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.9 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.9 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.9 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.9 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.9 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.9 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.9 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.9 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.9 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.9 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.9 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.9 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.9 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.9 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.89 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.89 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.89 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.89 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.89 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.89 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.89 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.89 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.89 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.89 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.89 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.89 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.89 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.89 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.88 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.88 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.88 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.88 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.88 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.88 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.88 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.88 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.88 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.88 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.87 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.86 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.86 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.86 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.86 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.85 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.85 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.84 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.83 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.83 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.81 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.81 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.8 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.8 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.8 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.8 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.79 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.79 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.79 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.79 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.79 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.78 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.78 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.76 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.76 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.76 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.76 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.75 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.73 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.73 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.72 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.69 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.68 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.68 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.68 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.66 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.65 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.65 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.63 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.63 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.62 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.61 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.57 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.57 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.56 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.56 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.54 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.52 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.52 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.45 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.44 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.44 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.41 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.41 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.4 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.28 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.25 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.25 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.24 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.17 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.09 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.97 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 98.89 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.85 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.83 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 98.8 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.77 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.67 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.51 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.5 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.41 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.41 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.41 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.39 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.35 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.32 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 98.14 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.13 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 98.05 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.01 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.97 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.75 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.69 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.55 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.47 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.45 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.34 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.17 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.11 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.06 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.86 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.72 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.64 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.55 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 96.3 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.14 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.09 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.09 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 95.91 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 95.77 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 94.11 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 93.05 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 92.56 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 90.45 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 90.05 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 86.81 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-47 Score=445.02 Aligned_cols=348 Identities=28% Similarity=0.360 Sum_probs=276.0
Q ss_pred CCHHHHHHHHHHHHhCCCC--CCCCCCCCCCCCCCcceeecCCCEeEEEcCCCCcccccc---cCCccC-----------
Q 035786 22 DSAVQRSALLDLRSSLGLR--SRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGR---LNPRFA----------- 85 (693)
Q Consensus 22 ~~~~~~~aLl~~k~~l~~~--~~~W~~~~~~C~~W~gv~C~~~~v~~l~l~~~~~~~~g~---~~~~~~----------- 85 (693)
..++|++||++||+++.++ +++|+.++| ||+|+||+|+.|+|++|+|++... .|. +++.+.
T Consensus 9 ~~~~~~~all~~k~~~~~~~~l~~W~~~~~-~C~w~gv~C~~~~v~~L~L~~~~l--~g~~~~l~~~l~~L~~L~~l~~~ 85 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLPDKNLLPDWSSNKN-PCTFDGVTCRDDKVTSIDLSSKPL--NVGFSAVSSSLLSLTGLESLFLS 85 (768)
T ss_dssp CHHHHHHHHHHHHTTCSCTTSSTTCCTTSC-GGGSTTEEEETTEEEEEECTTSCC--CEEHHHHHHHTTTCTTCCEEECT
T ss_pred CCHHHHHHHHHHHhhCCCcccccCCCCCCC-CcCCcceEECCCcEEEEECCCCCc--CCccCccChhHhccCcccccCCc
Confidence 3678999999999999754 579985555 669999999989999999998653 344 333111
Q ss_pred -------ccccccCCCCCEEEccCCCCCCcCch--HhhhCCCCccEEEecCCCCCcCCCccc-CCCccCCEEecccCcCC
Q 035786 86 -------VDSLGNLTLLSSFNASGLSLPGSIPE--WFGYRLPALQVLDLRSCSLSGSIPGSF-GNLSRLNVLYLSGNSLA 155 (693)
Q Consensus 86 -------~~~l~~L~~L~~L~ls~~~l~g~ip~--~~~~~l~~L~~L~Ls~n~l~g~~p~~~-~~l~~L~~L~Ls~N~l~ 155 (693)
++.++++++|++|++++|.+.|.+|. .++. +++|++|+|++|.+++.+|..+ +++++|++|+|++|.++
T Consensus 86 ~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 164 (768)
T 3rgz_A 86 NSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGS-CSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164 (768)
T ss_dssp TSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGG-CTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCE
T ss_pred CCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhC-CCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccC
Confidence 14678889999999999999998888 7875 9999999999999988888776 78899999999999998
Q ss_pred ccCccc---cCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCc
Q 035786 156 GNVPAT---LGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPS 232 (693)
Q Consensus 156 ~~~p~~---~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 232 (693)
+..|.. +.++++|++|++++|.+++.+|. ..+++|++|++++|.+++.+|. ++++++|++|++++|++++.+|.
T Consensus 165 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~ 241 (768)
T 3rgz_A 165 GANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSR 241 (768)
T ss_dssp EETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHH
T ss_pred CcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccH
Confidence 888876 78888888888888888876654 6788888888888888887776 88888888888888888888888
Q ss_pred cccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCC
Q 035786 233 EVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPN 312 (693)
Q Consensus 233 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~ 312 (693)
.++++++|++|++++|.+++.+|.. .+++|++|++++|.++|.+|..++..+++|++|++++|++++.+|..+..+++
T Consensus 242 ~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~ 319 (768)
T 3rgz_A 242 AISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319 (768)
T ss_dssp HTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTT
T ss_pred HHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCC
Confidence 8888888888888888888777765 77888888888888888888776555688888888888888888888888888
Q ss_pred CCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCC-CCCEEEccCCcceeecCCCc
Q 035786 313 LRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFR-KFSLIDLSSNYFQGTVADDR 378 (693)
Q Consensus 313 L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~-~l~~ldLs~N~l~g~ip~~~ 378 (693)
|++|+|++|+++|.+|...+..+..|++|++++|+++|.+|. ..+. +|+.||+++|.++|.+|..+
T Consensus 320 L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~ 388 (768)
T 3rgz_A 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 388 (768)
T ss_dssp CCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTT
T ss_pred ccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhh
Confidence 888888888888888865466777777777777777777665 2233 56666666666666665543
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=415.85 Aligned_cols=352 Identities=20% Similarity=0.324 Sum_probs=309.5
Q ss_pred CHHHHHHHHHHHHhCCCC-----------CCCCCCCCCCCCCC---cceeec-CCCEeEEEcCCCCcccccccCCccCcc
Q 035786 23 SAVQRSALLDLRSSLGLR-----------SRDWPLRTEPCRSW---RGVQCQ-NGQVIAINISGFKRTRIGRLNPRFAVD 87 (693)
Q Consensus 23 ~~~~~~aLl~~k~~l~~~-----------~~~W~~~~~~C~~W---~gv~C~-~~~v~~l~l~~~~~~~~g~~~~~~~~~ 87 (693)
...|+.||.++++++... ..+|+.+.+ ||.| .||+|+ .|||++|+|++.. ..|.+++
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~-~c~w~~~~GV~C~~~~~V~~L~L~~~~--l~g~lp~----- 99 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKE-LDMWGAQPGVSLNSNGRVTGLSLEGFG--ASGRVPD----- 99 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSC-GGGTTCCTTEEECTTCCEEEEECTTSC--CEEEECG-----
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCC-cccccCCCCeEEcCCCCEEEEEecCcc--cCCcCCh-----
Confidence 347999999999998532 137986655 5589 999997 5899999999865 4588876
Q ss_pred ccccCCCCCEEEccCCCC--------------------------------------------------------------
Q 035786 88 SLGNLTLLSSFNASGLSL-------------------------------------------------------------- 105 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l-------------------------------------------------------------- 105 (693)
.+++|++|++|++++|.+
T Consensus 100 ~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 179 (636)
T 4eco_A 100 AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSS 179 (636)
T ss_dssp GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCC
T ss_pred HHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccccc
Confidence 789999999999998843
Q ss_pred ----------------CCcCchHhhhCCCCccEEEecCCCCCcC-----------------CCcccC--CCccCCEEecc
Q 035786 106 ----------------PGSIPEWFGYRLPALQVLDLRSCSLSGS-----------------IPGSFG--NLSRLNVLYLS 150 (693)
Q Consensus 106 ----------------~g~ip~~~~~~l~~L~~L~Ls~n~l~g~-----------------~p~~~~--~l~~L~~L~Ls 150 (693)
+| ||+.++. +++|++|+|++|.++|. +|..++ ++++|++|+|+
T Consensus 180 ~~~l~~l~l~~~~n~l~~-ip~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~ 257 (636)
T 4eco_A 180 RITLKDTQIGQLSNNITF-VSKAVMR-LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVY 257 (636)
T ss_dssp CCCCCTTTTTCCSCEEEE-ECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccchhhhhhccccCCCcc-CCHHHhc-ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEec
Confidence 35 8888875 99999999999999996 999999 99999999999
Q ss_pred cCcCCccCccccCCCCCCCEEEccCCC-CCC-cCchhhhcC------cCCCeeecccccCCCcCcc--cccCCCCCCEEE
Q 035786 151 GNSLAGNVPATLGELKKLSNLDLSRNL-LTG-EIPNAISLL------GNLTRLNLASNFFTGQIPS--GLYSLSSIQFLN 220 (693)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~ 220 (693)
+|.+.+.+|+.++++++|++|+|++|+ ++| .+|..++.+ ++|++|++++|.++ .+|. .++.+++|+.|+
T Consensus 258 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~ 336 (636)
T 4eco_A 258 NCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLE 336 (636)
T ss_dssp CCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEE
T ss_pred CCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEe
Confidence 999999999999999999999999998 999 899999887 99999999999999 8998 899999999999
Q ss_pred ccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcc-ccccccccccccccCCCcccCCC--CCCCEEEccCC
Q 035786 221 LSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRN-LAKLVISENGLEGQLSEGLFPTL--DQLQVVDLSGN 297 (693)
Q Consensus 221 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~-L~~L~Ls~N~l~g~i~~~~~~~l--~~L~~L~Ls~N 297 (693)
+++|+++|.+| .++++++|++|++++|+++ .+|..+.++++ |++|++++|.++ .+|..+ ..+ ++|+.|++++|
T Consensus 337 L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~-~~~~l~~L~~L~Ls~N 412 (636)
T 4eco_A 337 CLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIF-DAKSVSVMSAIDFSYN 412 (636)
T ss_dssp CCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCC-CTTCSSCEEEEECCSS
T ss_pred CcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhh-hhcccCccCEEECcCC
Confidence 99999999999 8999999999999999999 88999999999 999999999999 777653 444 48999999999
Q ss_pred cCCCcCccccc-------CCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCC----------CC
Q 035786 298 KLDGALPATLF-------LRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFR----------KF 360 (693)
Q Consensus 298 ~l~g~~p~~l~-------~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~----------~l 360 (693)
++++.+|..+. .+++|+.|+|++|+++ .+|...+..++.|+.|+|++|+++ .+|...+. +|
T Consensus 413 ~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L 490 (636)
T 4eco_A 413 EIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLL 490 (636)
T ss_dssp CTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGC
T ss_pred cCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCc
Confidence 99999998888 7889999999999999 677655667889999999999998 77764443 89
Q ss_pred CEEEccCCcceeecCCCcC-------cccccCCCcCCCC
Q 035786 361 SLIDLSSNYFQGTVADDRG-------RNVSLGRNCLQSV 392 (693)
Q Consensus 361 ~~ldLs~N~l~g~ip~~~~-------~~~~l~~n~l~g~ 392 (693)
+.|||++|.++ .+|..+. +.+++++|.+.+.
T Consensus 491 ~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~i 528 (636)
T 4eco_A 491 TSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKF 528 (636)
T ss_dssp CEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSC
T ss_pred cEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCc
Confidence 99999999999 7887664 3578889988873
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-44 Score=418.09 Aligned_cols=354 Identities=21% Similarity=0.318 Sum_probs=300.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCCCCCC-----CCC-CCC------------cceeec-CCCEeEEEcCCCCccccccc
Q 035786 20 PLDSAVQRSALLDLRSSLGLRSRDWPLRT-----EPC-RSW------------RGVQCQ-NGQVIAINISGFKRTRIGRL 80 (693)
Q Consensus 20 ~~~~~~~~~aLl~~k~~l~~~~~~W~~~~-----~~C-~~W------------~gv~C~-~~~v~~l~l~~~~~~~~g~~ 80 (693)
+.+..+|++||++||+++.++ +|+.++ +|| |.| .||+|+ .+||++|+|++.. ..|.+
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~--~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~--L~G~i 339 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK--NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFG--AKGRV 339 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG--GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTC--CEEEE
T ss_pred cccchHHHHHHHHHHHHcCCC--CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCC--CCCcC
Confidence 334568999999999999765 897654 552 699 999998 6999999999875 45888
Q ss_pred CCccCccccccCCCCCEEEc-cCCCCCCc---------------------------------------------------
Q 035786 81 NPRFAVDSLGNLTLLSSFNA-SGLSLPGS--------------------------------------------------- 108 (693)
Q Consensus 81 ~~~~~~~~l~~L~~L~~L~l-s~~~l~g~--------------------------------------------------- 108 (693)
|+ ++++|++|+.|++ +.|.++|.
T Consensus 340 p~-----~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 340 PD-----AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp CG-----GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred ch-----HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 76 7899999999999 77755444
Q ss_pred -------------------------CchHhhhCCCCccEEEecCCCCCc-----------------CCCcccC--CCccC
Q 035786 109 -------------------------IPEWFGYRLPALQVLDLRSCSLSG-----------------SIPGSFG--NLSRL 144 (693)
Q Consensus 109 -------------------------ip~~~~~~l~~L~~L~Ls~n~l~g-----------------~~p~~~~--~l~~L 144 (693)
||+.++. +++|++|+|++|.|+| .+|..++ ++++|
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~-L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L 493 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITFISKAIQR-LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDL 493 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEEECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC
T ss_pred cccccccccchhhceeccccCcccchhHHHhc-CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCC
Confidence 8888875 9999999999999999 4899988 99999
Q ss_pred CEEecccCcCCccCccccCCCCCCCEEEccCCC-CCC-cCchhhhcCc-------CCCeeecccccCCCcCcc--cccCC
Q 035786 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL-LTG-EIPNAISLLG-------NLTRLNLASNFFTGQIPS--GLYSL 213 (693)
Q Consensus 145 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~g~~p~--~~~~l 213 (693)
++|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..++.++ +|++|+|++|.++ .+|. .++++
T Consensus 494 ~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L 572 (876)
T 4ecn_A 494 TDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKM 572 (876)
T ss_dssp CEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTC
T ss_pred CEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcC
Confidence 999999999999999999999999999999998 998 8999888877 9999999999999 8998 89999
Q ss_pred CCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcc-ccccccccccccccCCCcccCCCC--CCC
Q 035786 214 SSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRN-LAKLVISENGLEGQLSEGLFPTLD--QLQ 290 (693)
Q Consensus 214 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~-L~~L~Ls~N~l~g~i~~~~~~~l~--~L~ 290 (693)
++|+.|+|++|+++ .+| .|+++++|+.|+|++|+++ .+|..+.++++ |++|+|++|.++ .+|.. +..++ +|+
T Consensus 573 ~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~-~~~~~~~~L~ 647 (876)
T 4ecn_A 573 VKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNI-FNAKSVYVMG 647 (876)
T ss_dssp TTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSC-CCTTCSSCEE
T ss_pred CCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchh-hhccccCCCC
Confidence 99999999999999 888 8999999999999999999 89999999999 999999999998 67754 35554 499
Q ss_pred EEEccCCcCCCcCcccc---c--CCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCC-------
Q 035786 291 VVDLSGNKLDGALPATL---F--LRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFR------- 358 (693)
Q Consensus 291 ~L~Ls~N~l~g~~p~~l---~--~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~------- 358 (693)
.|++++|+++|.+|... . .+++|+.|+|++|+++ .+|...+..++.|+.|+|++|+++ .+|...+.
T Consensus 648 ~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~ 725 (876)
T 4ecn_A 648 SVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYK 725 (876)
T ss_dssp EEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCT
T ss_pred EEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhcccccccc
Confidence 99999999998776432 2 3458889999999988 677655557788889999999888 66653332
Q ss_pred ---CCCEEEccCCcceeecCCCcC-------cccccCCCcCCCC
Q 035786 359 ---KFSLIDLSSNYFQGTVADDRG-------RNVSLGRNCLQSV 392 (693)
Q Consensus 359 ---~l~~ldLs~N~l~g~ip~~~~-------~~~~l~~n~l~g~ 392 (693)
+|+.|+|++|+++ .+|..+. ..+++++|.+.+.
T Consensus 726 nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~l 768 (876)
T 4ecn_A 726 NTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSF 768 (876)
T ss_dssp TGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSC
T ss_pred ccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCcc
Confidence 7888999999888 6776654 2567888888773
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-43 Score=369.10 Aligned_cols=289 Identities=33% Similarity=0.508 Sum_probs=244.0
Q ss_pred CCCHHHHHHHHHHHHhCCCC--CCCCCCCCCCCCC--CcceeecC----CCEeEEEcCCCCcccccccCCccCccccccC
Q 035786 21 LDSAVQRSALLDLRSSLGLR--SRDWPLRTEPCRS--WRGVQCQN----GQVIAINISGFKRTRIGRLNPRFAVDSLGNL 92 (693)
Q Consensus 21 ~~~~~~~~aLl~~k~~l~~~--~~~W~~~~~~C~~--W~gv~C~~----~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L 92 (693)
.|.++|++||++||+++.++ .++|..++++| . |.||+|+. ++|+.++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C-~~~w~gv~C~~~~~~~~l~~L~L----------------------- 57 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCC-NRTWLGVLCDTDTQTYRVNNLDL----------------------- 57 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTT-TTCSTTEEECCSSSCCCEEEEEE-----------------------
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCC-cCCCcceEeCCCCCCceEEEEEC-----------------------
Confidence 47899999999999999753 46897666655 6 99999973 45655555
Q ss_pred CCCCEEEccCCCCCC--cCchHhhhCCCCccEEEecC-CCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCC
Q 035786 93 TLLSSFNASGLSLPG--SIPEWFGYRLPALQVLDLRS-CSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLS 169 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g--~ip~~~~~~l~~L~~L~Ls~-n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 169 (693)
++|.+.| .+|+.+.. +++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..+.++++|+
T Consensus 58 --------~~~~l~~~~~~~~~l~~-l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 58 --------SGLNLPKPYPIPSSLAN-LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp --------ECCCCSSCEECCGGGGG-CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred --------CCCCccCCcccChhHhC-CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 4456667 77888875 89999999984 888888898899999999999999999888898899999999
Q ss_pred EEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCC-CCCEEEccCCcccccCCccccCCCCCCEEEccCC
Q 035786 170 NLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLS-SIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKN 248 (693)
Q Consensus 170 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 248 (693)
+|+|++|.+++.+|..+..+++|++|++++|.+++.+|..++.++ +|+.|++++|++++.+|..+..++ |++|++++|
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 999999999888898999999999999999999888898888887 899999999999988998888887 999999999
Q ss_pred cCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCC
Q 035786 249 SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 249 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p 328 (693)
.+++.+|..+..+++|++|+|++|.+++.++. +..+++|++|++++|++++.+|.++..+++|+.|+|++|+++|.+|
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGG--CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCc--ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 99988888888899999999999998877665 5678889999999999988889888888999999999999988888
Q ss_pred ccCcCCCCCCcEEEccCCc
Q 035786 329 ILSTNGNASGAVFNISNNM 347 (693)
Q Consensus 329 ~~~~~~~~~l~~l~ls~N~ 347 (693)
.. ..+..|+.+++++|+
T Consensus 286 ~~--~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 286 QG--GNLQRFDVSAYANNK 302 (313)
T ss_dssp CS--TTGGGSCGGGTCSSS
T ss_pred CC--ccccccChHHhcCCC
Confidence 53 555666666666666
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=392.28 Aligned_cols=304 Identities=31% Similarity=0.479 Sum_probs=211.2
Q ss_pred cccCCCCCEEEccCCCCCCcCchHhhhCCC-CccEEEecCCCCCcCCCcccCC--CccCCEEecccCcCCccCccccCCC
Q 035786 89 LGNLTLLSSFNASGLSLPGSIPEWFGYRLP-ALQVLDLRSCSLSGSIPGSFGN--LSRLNVLYLSGNSLAGNVPATLGEL 165 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~-~L~~L~Ls~n~l~g~~p~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l 165 (693)
+.+++.|++|++++|.+.|.+|..+.. ++ +|++|+|++|.++|.+|..+.. +++|++|+|++|.+++.+|..+.++
T Consensus 339 l~~l~~L~~L~Ls~n~l~~~~p~~l~~-l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l 417 (768)
T 3rgz_A 339 LLKMRGLKVLDLSFNEFSGELPESLTN-LSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNC 417 (768)
T ss_dssp HTTCTTCCEEECCSSEEEECCCTTHHH-HTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGC
T ss_pred HhcCCCCCEEeCcCCccCccccHHHHh-hhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcC
Confidence 455666666666666666666655543 43 5555555555555555555544 5566666666666666677777777
Q ss_pred CCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEc
Q 035786 166 KKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDL 245 (693)
Q Consensus 166 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 245 (693)
++|++|+|++|.+++.+|..+..+++|+.|++++|.+++.+|..+..+++|++|++++|++++.+|..++++++|++|++
T Consensus 418 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 497 (768)
T 3rgz_A 418 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL 497 (768)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEc
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCccccc-----------------
Q 035786 246 SKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF----------------- 308 (693)
Q Consensus 246 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~----------------- 308 (693)
++|++++.+|.+++.+++|++|+|++|+++|.+|..+ ..+++|+.|++++|+++|.+|..++
T Consensus 498 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~ 576 (768)
T 3rgz_A 498 SNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL-GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 576 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGG-GGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEE
T ss_pred cCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHH-cCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccc
Confidence 7777777777777777777777777777777776653 6677777777777777766665442
Q ss_pred -----------------------------------------------------CCCCCCEEEccCCcCcccCCccCcCCC
Q 035786 309 -----------------------------------------------------LRPNLRFLDLSRNNITGSWPILSTNGN 335 (693)
Q Consensus 309 -----------------------------------------------------~~~~L~~L~Ls~N~l~g~~p~~~~~~~ 335 (693)
.+++|+.|||++|+++|.+|. .+..+
T Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~-~l~~l 655 (768)
T 3rgz_A 577 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPK-EIGSM 655 (768)
T ss_dssp EEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCG-GGGGC
T ss_pred ccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCH-HHhcc
Confidence 235677777777777777774 45667
Q ss_pred CCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCCcC-----cccccCCCcCCCCccC
Q 035786 336 ASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADDRG-----RNVSLGRNCLQSVASQ 395 (693)
Q Consensus 336 ~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~-----~~~~l~~n~l~g~~~~ 395 (693)
..|+.|+|++|+++|.+|. ..+++|+.||||+|+++|.+|..+. +.+++++|.++|.+|.
T Consensus 656 ~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~ 722 (768)
T 3rgz_A 656 PYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCS
T ss_pred ccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCC
Confidence 7777788888888777776 5677777888888888888777654 3567777877776654
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=336.58 Aligned_cols=331 Identities=19% Similarity=0.166 Sum_probs=223.2
Q ss_pred CCcc--eeecC----------CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCc
Q 035786 53 SWRG--VQCQN----------GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPAL 120 (693)
Q Consensus 53 ~W~g--v~C~~----------~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L 120 (693)
.|.+ |.|+. .+++.++|++... ..+.+ ..+.++++|++|++++|.+.+.+|+.....+++|
T Consensus 9 ~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i---~~~~~----~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L 81 (455)
T 3v47_A 9 SVIGYNAICINRGLHQVPELPAHVNYVDLSLNSI---AELNE----TSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSL 81 (455)
T ss_dssp EEETTEEECCSSCCSSCCCCCTTCCEEECCSSCC---CEECT----TTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTC
T ss_pred EEEccccCcCCCCcccCCCCCCccCEEEecCCcc---CcCCh----hHhccCccccEEECcCCcccceECcccccccccC
Confidence 5555 88863 2477888887542 22322 3678899999999999999888865433459999
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccc--cCCCCCCCEEEccCCCCCCcCchh-hhcCcCCCeeec
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPAT--LGELKKLSNLDLSRNLLTGEIPNA-ISLLGNLTRLNL 197 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L 197 (693)
++|+|++|.+++..|..|+++++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..|.. +..+++|++|++
T Consensus 82 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L 161 (455)
T 3v47_A 82 IILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDL 161 (455)
T ss_dssp CEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEEC
T ss_pred CEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeC
Confidence 99999999999888999999999999999999998866655 889999999999999999887876 889999999999
Q ss_pred ccccCCCcCcccccCC--CCCCEEEccCCcccccCCccc--------cCCCCCCEEEccCCcCcccCchhhhcC------
Q 035786 198 ASNFFTGQIPSGLYSL--SSIQFLNLSDNALTGFIPSEV--------GNLDKLIELDLSKNSISGSLPLELRGL------ 261 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l--~~L~~L~Ls~N~l~g~~p~~~--------~~l~~L~~L~Ls~N~l~g~~p~~~~~l------ 261 (693)
++|.+++..|..+..+ .+|+.|++++|.+.+..+..+ ..+++|++|++++|.+++..|..+..+
T Consensus 162 ~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L 241 (455)
T 3v47_A 162 TFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKI 241 (455)
T ss_dssp TTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCE
T ss_pred CCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccce
Confidence 9999998888777655 455555555555554333221 234556666666665555444433221
Q ss_pred ---------------------------------ccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCccccc
Q 035786 262 ---------------------------------RNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF 308 (693)
Q Consensus 262 ---------------------------------~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~ 308 (693)
++|++|++++|.+++.+|.. |..+++|+.|++++|++++..|..+.
T Consensus 242 ~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~ 320 (455)
T 3v47_A 242 QSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSV-FSHFTDLEQLTLAQNEINKIDDNAFW 320 (455)
T ss_dssp EEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTT-TTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred eeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhh-cccCCCCCEEECCCCcccccChhHhc
Confidence 35666666666666544433 45666666666666666666666666
Q ss_pred CCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCCcC-----cc
Q 035786 309 LRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADDRG-----RN 381 (693)
Q Consensus 309 ~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~-----~~ 381 (693)
.+++|+.|+|++|++++..| ..+..++.|+.|++++|++++..|. ..+++|+.|||++|++++..+..+. +.
T Consensus 321 ~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 399 (455)
T 3v47_A 321 GLTHLLKLNLSQNFLGSIDS-RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQK 399 (455)
T ss_dssp TCTTCCEEECCSSCCCEECG-GGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred CcccCCEEECCCCccCCcCh-hHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccE
Confidence 66666666666666654444 3445566666666666666655543 4456666666666666653332222 24
Q ss_pred cccCCCcCCCC
Q 035786 382 VSLGRNCLQSV 392 (693)
Q Consensus 382 ~~l~~n~l~g~ 392 (693)
+++++|.+.+.
T Consensus 400 L~l~~N~l~~~ 410 (455)
T 3v47_A 400 IWLHTNPWDCS 410 (455)
T ss_dssp EECCSSCBCCC
T ss_pred EEccCCCcccC
Confidence 55666655544
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-37 Score=321.76 Aligned_cols=172 Identities=23% Similarity=0.303 Sum_probs=134.4
Q ss_pred CCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||+||+|++. +++.||||+++..... .++|.+|+++|++++|||||+++|+|.+ ++..+|
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~l 120 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-GRPLLM 120 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEE
Confidence 3555678999999999999874 4789999999754433 5789999999999999999999999986 467899
Q ss_pred EEccCCCCChhhhhhccCCCC-------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 586 VYKYMVCGDLASSLHRVTDLE-------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~-------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
|||||++|+|.++|+...... .....+++|.++++|+.|||+||+|||+. +||||||||+|||||+++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 999999999999998643211 11234699999999999999999999987 89999999999999999999
Q ss_pred EECCcccccccCCC-Ccceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~-~~~~~~~~~~~~~y~a 688 (693)
||+|||+++..... .....+..+||+.|||
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymA 228 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 228 (329)
T ss_dssp EECCCC----------------CCCCGGGCC
T ss_pred EEcccccceeccCCCcceecCcccccccccC
Confidence 99999999987432 2333455778888887
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-37 Score=318.64 Aligned_cols=170 Identities=21% Similarity=0.298 Sum_probs=139.9
Q ss_pred CccCccccCCeeeEEEEEeC------CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 515 SETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
...+.||+|+||+||||++. +++.||||+++.... ..++|.+|++++++++|||||+++|+|.+ ++..+||
T Consensus 29 ~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~~lV 107 (308)
T 4gt4_A 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK-DQPLSMI 107 (308)
T ss_dssp EEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEE
T ss_pred eEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-CCEEEEE
Confidence 34567999999999999973 467899999975433 25789999999999999999999999976 4678999
Q ss_pred EccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 587 YKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
||||++|||.++|+...... ......++|.++++|+.|||+||+|||+. +||||||||+|||||+++++
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCE
Confidence 99999999999997543211 01124699999999999999999999998 89999999999999999999
Q ss_pred EECCcccccccCCC-Ccceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~-~~~~~~~~~~~~~y~a 688 (693)
||+|||+++..... .....+..+||+.|||
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymA 215 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMA 215 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCC
T ss_pred EECCcccceeccCCCceeEecccccCCcccC
Confidence 99999999987332 2223445678888876
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-37 Score=318.22 Aligned_cols=172 Identities=23% Similarity=0.342 Sum_probs=139.9
Q ss_pred CCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||+||+|++. +++.||||+++....+ .++|.+|+++|++++|||||+++|+|.+ ++..+|
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~l 92 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-GDPLIM 92 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee-CCEEEE
Confidence 4556678999999999999864 4788999999764433 5689999999999999999999999986 467899
Q ss_pred EEccCCCCChhhhhhccCC-----CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 586 VYKYMVCGDLASSLHRVTD-----LEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~-----~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
|||||++|+|.++|+.... ........++|.++++|+.|||+||+|||+. +||||||||+|||||+++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 9999999999999986421 0112235699999999999999999999998 8999999999999999999999
Q ss_pred CCcccccccCCCCcc-eeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
+|||+|+........ ......||+.|||
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymA 198 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMP 198 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCC
T ss_pred CCcccceecCCCCceeecCceecChhhcC
Confidence 999999987443322 2333568888887
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=315.65 Aligned_cols=163 Identities=19% Similarity=0.351 Sum_probs=134.8
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+++...+.||+|+||+||+|++.+ .||||+++..... .++|.+|+++|++++|||||+++|+|.+ +..+||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--~~~~iVmE 111 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--DNLAIVTQ 111 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--CeEEEEEE
Confidence 346667889999999999999864 5999998754322 4689999999999999999999999853 46899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
||++|+|.++|+... ..++|.++++|+.|||+||+|||+. +||||||||+|||||+++++||+|||+|+.
T Consensus 112 y~~gGsL~~~l~~~~-------~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 181 (307)
T 3omv_A 112 WCEGSSLYKHLHVQE-------TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATV 181 (307)
T ss_dssp CCSSCBHHHHHHTSC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC
T ss_pred cCCCCCHHHHHhhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCcee
Confidence 999999999997543 3599999999999999999999988 999999999999999999999999999998
Q ss_pred cCCC-Ccceeeeeehhhhhhh
Q 035786 669 QGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~-~~~~~~~~~~~~~y~a 688 (693)
.... .....+..+||+.|||
T Consensus 182 ~~~~~~~~~~~~~~GT~~ymA 202 (307)
T 3omv_A 182 KSRWSGSQQVEQPTGSVLWMA 202 (307)
T ss_dssp ------------CCCCTTSCC
T ss_pred cccCCcceeecccccCCCccC
Confidence 7432 2223455788999987
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=316.96 Aligned_cols=165 Identities=21% Similarity=0.284 Sum_probs=133.9
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCC---eeEEEEccC
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET---EKLLVYKYM 590 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~---~~~lv~ey~ 590 (693)
+...+.||+|+||+||+|++ +|+.||||+++........+.+|+..+.+++|||||+++|+|.+.+. ..+||||||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~ 83 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence 44567899999999999998 48999999997543333334456666788999999999999986432 478999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-----CCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC-----NPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~-----~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
++|+|.++|+. ..++|.++.+|+.|+|+||+|||+++ .++||||||||+|||||+++++||+|||+
T Consensus 84 ~~gsL~~~l~~---------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 84 EHGSLFDYLNR---------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp TTCBHHHHHHH---------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred CCCcHHHHHHh---------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence 99999999975 24899999999999999999999873 67999999999999999999999999999
Q ss_pred ccccCCCCcc---eeeeeehhhhhhh
Q 035786 666 LHAQGDSHQN---VLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~---~~~~~~~~~~y~a 688 (693)
|+.......+ ..+..+||++|||
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymA 180 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMA 180 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCC
T ss_pred CccccCCCCceeeecccccccccccC
Confidence 9987433222 2334679999987
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-35 Score=336.12 Aligned_cols=266 Identities=23% Similarity=0.345 Sum_probs=124.5
Q ss_pred cCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCC-CCc-CCCcccCCC------ccCCEEecccCcCCccCcc--
Q 035786 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCS-LSG-SIPGSFGNL------SRLNVLYLSGNSLAGNVPA-- 160 (693)
Q Consensus 91 ~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~-l~g-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~-- 160 (693)
++++|++|++++|.+.|.+|+.++. +++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|.
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~ 324 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKA-LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVET 324 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTT-CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHH
T ss_pred ccCCCCEEEecCCcCCccChHHHhc-CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchh
Confidence 4455555555555555555544442 5555555555554 444 444444443 45555555555554 4444
Q ss_pred ccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCC-CCEEEccCCcccccCCccccCCC-
Q 035786 161 TLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSS-IQFLNLSDNALTGFIPSEVGNLD- 238 (693)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~-L~~L~Ls~N~l~g~~p~~~~~l~- 238 (693)
.++++++|++|+|++|.++|.+| .+..+++|++|++++|.++ .+|..+..+++ |+.|++++|+++ .+|..+..++
T Consensus 325 ~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l 401 (636)
T 4eco_A 325 SLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSV 401 (636)
T ss_dssp HHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCS
T ss_pred hhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhccc
Confidence 45555555555555555554444 4444455555555555544 44444444444 555555555544 3444444333
Q ss_pred -CCCEEEccCCcCcccCchhhh-------cCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCC
Q 035786 239 -KLIELDLSKNSISGSLPLELR-------GLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310 (693)
Q Consensus 239 -~L~~L~Ls~N~l~g~~p~~~~-------~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~ 310 (693)
+|++|++++|.+++.+|..+. .+++|++|+|++|+++ .+|..++..+++|+.|++++|+++ .+|......
T Consensus 402 ~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~ 479 (636)
T 4eco_A 402 SVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKD 479 (636)
T ss_dssp SCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEE
T ss_pred CccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhcc
Confidence 445555555555444444444 4444444555554444 344444444444444444444444 333322211
Q ss_pred C--------CCCEEEccCCcCcccCCccCc-CCCCCCcEEEccCCccceecCC--CCCCCCCEEEc
Q 035786 311 P--------NLRFLDLSRNNITGSWPILST-NGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDL 365 (693)
Q Consensus 311 ~--------~L~~L~Ls~N~l~g~~p~~~~-~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldL 365 (693)
. +|+.|+|++|+++ .+|.... ..++.|+.|+|++|++++ +|. ..+++|+.|+|
T Consensus 480 ~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~L 543 (636)
T 4eco_A 480 ENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGI 543 (636)
T ss_dssp TTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEEC
T ss_pred ccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEEC
Confidence 1 4444444444444 3442221 144444444444444444 333 23444444444
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=318.00 Aligned_cols=300 Identities=22% Similarity=0.229 Sum_probs=262.4
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCC-CcccCCCccCCEEecccCcCCccCccccCCCCCCCEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSI-PGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNL 171 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 171 (693)
++|++|++++|.+.+..|..+. .+++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|+++++|++|
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 108 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFS-RLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTS-SCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEE
T ss_pred CccCEEEecCCccCcCChhHhc-cCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEE
Confidence 6899999999999988888886 4999999999999998766 5679999999999999999999999999999999999
Q ss_pred EccCCCCCCcCchh--hhcCcCCCeeecccccCCCcCccc-ccCCCCCCEEEccCCcccccCCccccCC--CCCCEEEcc
Q 035786 172 DLSRNLLTGEIPNA--ISLLGNLTRLNLASNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEVGNL--DKLIELDLS 246 (693)
Q Consensus 172 ~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l--~~L~~L~Ls 246 (693)
+|++|.+++.+|.. +..+++|++|+|++|.+++..|.. +..+++|++|++++|++++..|..+..+ .+|+.|+++
T Consensus 109 ~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~ 188 (455)
T 3v47_A 109 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLS 188 (455)
T ss_dssp ECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECT
T ss_pred eCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccc
Confidence 99999999876665 999999999999999999888876 8899999999999999999999988876 789999999
Q ss_pred CCcCcccCchhh--------hcCccccccccccccccccCCCccc-----------------------------------
Q 035786 247 KNSISGSLPLEL--------RGLRNLAKLVISENGLEGQLSEGLF----------------------------------- 283 (693)
Q Consensus 247 ~N~l~g~~p~~~--------~~l~~L~~L~Ls~N~l~g~i~~~~~----------------------------------- 283 (693)
+|.+++..+..+ ..+++|++|++++|.+++.+|..++
T Consensus 189 ~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~ 268 (455)
T 3v47_A 189 SITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFT 268 (455)
T ss_dssp TCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTT
T ss_pred cCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccc
Confidence 999997665443 3668999999999998765443211
Q ss_pred -C--CCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCC
Q 035786 284 -P--TLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFR 358 (693)
Q Consensus 284 -~--~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~ 358 (693)
. ..++|+.|++++|++++.+|..+..+++|+.|+|++|++++..| ..+..+..|+.|++++|.+.+..|. ..++
T Consensus 269 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 347 (455)
T 3v47_A 269 FKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDD-NAFWGLTHLLKLNLSQNFLGSIDSRMFENLD 347 (455)
T ss_dssp TGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCEECGGGGTTCT
T ss_pred cccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccCh-hHhcCcccCCEEECCCCccCCcChhHhcCcc
Confidence 0 12589999999999999999999999999999999999998767 4567889999999999999887665 6788
Q ss_pred CCCEEEccCCcceeecCCCcC-----cccccCCCcCCCCcc
Q 035786 359 KFSLIDLSSNYFQGTVADDRG-----RNVSLGRNCLQSVAS 394 (693)
Q Consensus 359 ~l~~ldLs~N~l~g~ip~~~~-----~~~~l~~n~l~g~~~ 394 (693)
+|+.|||++|.+++..|..+. +.+++++|.+.+.++
T Consensus 348 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 388 (455)
T 3v47_A 348 KLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPD 388 (455)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCEEECCCCcccccChhhccccccccEEECCCCccccCCH
Confidence 999999999999999887765 368899999987543
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-35 Score=305.97 Aligned_cols=251 Identities=30% Similarity=0.481 Sum_probs=232.4
Q ss_pred CCccEEEecCCCCCc--CCCcccCCCccCCEEeccc-CcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCe
Q 035786 118 PALQVLDLRSCSLSG--SIPGSFGNLSRLNVLYLSG-NSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTR 194 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 194 (693)
.+++.|+|++|.++| .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..+..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 579999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred eecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCC-CCCEEEccCCcCcccCchhhhcCcccccccccccc
Q 035786 195 LNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLD-KLIELDLSKNSISGSLPLELRGLRNLAKLVISENG 273 (693)
Q Consensus 195 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 273 (693)
|++++|.+++.+|..+..+++|++|++++|++++.+|..++.++ +|++|++++|++++.+|..+..++ |++|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999999999999999999999999999999999999998 999999999999999999999997 9999999999
Q ss_pred ccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecC
Q 035786 274 LEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 274 l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~ 353 (693)
+++.+|. .|..+++|+.|++++|++++.+|. +..+++|++|+|++|+++|.+|. .+..++.|+.|++++|+++|.+|
T Consensus 209 l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 209 LEGDASV-LFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQ-GLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp EEECCGG-GCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCG-GGGGCTTCCEEECCSSEEEEECC
T ss_pred ccCcCCH-HHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCCh-HHhcCcCCCEEECcCCcccccCC
Confidence 9987665 468899999999999999988776 78889999999999999999995 45778899999999999999988
Q ss_pred C-CCCCCCCEEEccCCc-cee
Q 035786 354 S-SSFRKFSLIDLSSNY-FQG 372 (693)
Q Consensus 354 ~-~~~~~l~~ldLs~N~-l~g 372 (693)
. ..+++|+.+++++|+ +.|
T Consensus 286 ~~~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 286 QGGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CSTTGGGSCGGGTCSSSEEES
T ss_pred CCccccccChHHhcCCCCccC
Confidence 7 567788888898887 555
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-35 Score=306.38 Aligned_cols=163 Identities=20% Similarity=0.299 Sum_probs=143.1
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.|+..+.||+|+||+||+|+. .+|+.||||+++..... .+.+.+|+++|++++|||||++++++.+ ++..||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEeC
Confidence 3477778899999999999996 46999999999754433 5678999999999999999999999876 4689999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|++|+|.++++. ..+++.+...|+.||+.||+|||+. +||||||||+||||++++.+||+|||+|+.+
T Consensus 153 ~~gg~L~~~l~~---------~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 220 (346)
T 4fih_A 153 LEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 220 (346)
T ss_dssp CTTEEHHHHHHH---------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred CCCCcHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceec
Confidence 999999999975 2489999999999999999999998 9999999999999999999999999999987
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
...... .+..+||++|||
T Consensus 221 ~~~~~~-~~~~~GTp~YmA 238 (346)
T 4fih_A 221 SKEVPR-RKSLVGTPYWMA 238 (346)
T ss_dssp CSSSCC-BCCCCSCGGGCC
T ss_pred CCCCCc-ccccccCcCcCC
Confidence 544332 455889999997
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=314.15 Aligned_cols=277 Identities=21% Similarity=0.167 Sum_probs=164.2
Q ss_pred CCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEc
Q 035786 94 LLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDL 173 (693)
Q Consensus 94 ~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 173 (693)
.++.|++++|.+.+..|..|. .+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFA-SFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTT-TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCcEEECCCCccceECHhHcc-CCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 455666666666655555554 3666666666666666655666666666666666666666544445566666666666
Q ss_pred cCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCccc
Q 035786 174 SRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGS 253 (693)
Q Consensus 174 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 253 (693)
++|.+++..|..+..+++|++|++++|.+++..|..|..+++|+.|+|++|++++..+..+.++++|+.|++++|.+++.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 66666655566666666666666666666655555666666666666666666655445566666666666666666655
Q ss_pred CchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcC
Q 035786 254 LPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTN 333 (693)
Q Consensus 254 ~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~ 333 (693)
.+..|..+++|++|++++|.+.+.++...+. ..+|+.|++++|++++..+..+..+++|+.|+|++|++++..+ ..+.
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~-~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~ 269 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLY-GLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEG-SMLH 269 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTCCEECTTTTT-TCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECT-TSCT
T ss_pred ChhhcccCcccceeeCCCCccccccCccccc-CccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccCh-hhcc
Confidence 5555666666666666666655555554433 2356666666666664444455556666666666666654333 3445
Q ss_pred CCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceee
Q 035786 334 GNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGT 373 (693)
Q Consensus 334 ~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ 373 (693)
.+..|+.|+|++|++.+..|. ..+++|+.|||++|.+++.
T Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 311 (477)
T 2id5_A 270 ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTL 311 (477)
T ss_dssp TCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCC
T ss_pred ccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCcee
Confidence 555666666666666655443 3445566666666666553
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=306.18 Aligned_cols=278 Identities=19% Similarity=0.262 Sum_probs=179.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCC----CCCC---CCCCCCCCCcceeecCCCEeEEEcCCCCcccccccCCccCcccccc
Q 035786 19 VPLDSAVQRSALLDLRSSLGLRS----RDWP---LRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGN 91 (693)
Q Consensus 19 ~~~~~~~~~~aLl~~k~~l~~~~----~~W~---~~~~~C~~W~gv~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~ 91 (693)
......+|++||++||+++.... .+|. .....||.|.|+.|+.-. ..+ .-..
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~--------------~~l-------~~~~ 79 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATA--------------DLL-------EDAT 79 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHH--------------HHH-------HHHT
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhH--------------HHH-------hccc
Confidence 34456689999999999884222 4673 223334589999995100 000 0112
Q ss_pred CCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEE
Q 035786 92 LTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNL 171 (693)
Q Consensus 92 L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 171 (693)
.+.++.|++++|.+. .+|+.++. +++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|..++++++|++|
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~-l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFR-LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGG-GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred ccceeEEEccCCCch-hcChhhhh-CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 345566666666665 66666654 777777777777777 66777777777777777777776 667777777777777
Q ss_pred EccCCCCCCcCchhhhc---------CcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCE
Q 035786 172 DLSRNLLTGEIPNAISL---------LGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIE 242 (693)
Q Consensus 172 ~Ls~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 242 (693)
+|++|++.+.+|..+.. +++|++|+|++|.++ .+|..++.+++|++|+|++|++++ +|..++.+++|++
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~ 233 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEE 233 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCE
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCE
Confidence 77777777777766543 666666666666666 566666666666666666666664 4455666666666
Q ss_pred EEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCc
Q 035786 243 LDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNN 322 (693)
Q Consensus 243 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~ 322 (693)
|++++|.+.+.+|..+.++++|++|+|++|++.+.+|.. +..+++|+.|++++|++.+.+|.++..+++|+.+++..|.
T Consensus 234 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~-~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 234 LDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLD-IHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp EECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTT-GGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred EECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchh-hhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 666666666666666666666666666666666666654 3556666666666666666666666666666666666555
Q ss_pred Cc
Q 035786 323 IT 324 (693)
Q Consensus 323 l~ 324 (693)
+.
T Consensus 313 ~~ 314 (328)
T 4fcg_A 313 QA 314 (328)
T ss_dssp SC
T ss_pred HH
Confidence 43
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-33 Score=319.81 Aligned_cols=318 Identities=23% Similarity=0.242 Sum_probs=210.4
Q ss_pred CEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCc
Q 035786 63 QVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLS 142 (693)
Q Consensus 63 ~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~ 142 (693)
+++.++|++.... .+++ ..+.++++|++|++++|.+.+..|..|. .+++|++|+|++|.+++..|..|++++
T Consensus 33 ~l~~L~Ls~n~l~---~~~~----~~~~~l~~L~~L~Ls~n~l~~i~~~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 104 (606)
T 3vq2_A 33 STKNIDLSFNPLK---ILKS----YSFSNFSELQWLDLSRCEIETIEDKAWH-GLHHLSNLILTGNPIQSFSPGSFSGLT 104 (606)
T ss_dssp TCCEEECTTSCCC---EECT----TTTTTCTTCCEEECTTCCCCEECTTTTT-TCTTCCEEECTTCCCCCCCTTSSTTCT
T ss_pred CcCEEECCCCCcC---EeCh----hhccCCccCcEEeCCCCcccccCHHHhh-chhhcCEeECCCCcccccChhhcCCcc
Confidence 5788888875422 2222 2456677777777777777665565554 377777777777777766677777777
Q ss_pred cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCC-cCchhhhcCcCCCeeecccccCCCcCcccc-----------
Q 035786 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG-EIPNAISLLGNLTRLNLASNFFTGQIPSGL----------- 210 (693)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~----------- 210 (693)
+|++|+|++|.+++..|..++++++|++|+|++|.+++ .+|..++++++|++|++++|.+++..|..+
T Consensus 105 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~ 184 (606)
T 3vq2_A 105 SLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNL 184 (606)
T ss_dssp TCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCC
T ss_pred cCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccc
Confidence 77777777777766555666677777777777776664 456666666666666666666554433222
Q ss_pred --------------------------------------------------------------------------------
Q 035786 211 -------------------------------------------------------------------------------- 210 (693)
Q Consensus 211 -------------------------------------------------------------------------------- 210 (693)
T Consensus 185 ~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~ 264 (606)
T 3vq2_A 185 SLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTID 264 (606)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEE
T ss_pred eeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHh
Confidence
Q ss_pred ---------------------------------------cCCCCCCEEEccCCcccccCCc-------------------
Q 035786 211 ---------------------------------------YSLSSIQFLNLSDNALTGFIPS------------------- 232 (693)
Q Consensus 211 ---------------------------------------~~l~~L~~L~Ls~N~l~g~~p~------------------- 232 (693)
..+++|+.|++++|++ +.+|.
T Consensus 265 ~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~ 343 (606)
T 3vq2_A 265 EFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSIS 343 (606)
T ss_dssp EEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEE
T ss_pred heeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccc
Confidence 1122333444444433 22331
Q ss_pred -cccCCCCCCEEEccCCcCccc--CchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCc-cccc
Q 035786 233 -EVGNLDKLIELDLSKNSISGS--LPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALP-ATLF 308 (693)
Q Consensus 233 -~~~~l~~L~~L~Ls~N~l~g~--~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p-~~l~ 308 (693)
.++.+++|++|++++|.+++. +|..+..+++|++|++++|.+++ +| ..|..+++|+.|++++|++++..| ..+.
T Consensus 344 ~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 421 (606)
T 3vq2_A 344 FKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MS-ANFMGLEELQHLDFQHSTLKRVTEFSAFL 421 (606)
T ss_dssp CCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-EC-CCCTTCTTCCEEECTTSEEESTTTTTTTT
T ss_pred hhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-ch-hhccCCCCCCeeECCCCccCCccChhhhh
Confidence 234566777888888888765 47778888888888888888775 44 335677788888888888877766 5677
Q ss_pred CCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCcccee-cCC--CCCCCCCEEEccCCcceeecCCCcC-----c
Q 035786 309 LRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGD-LNS--SSFRKFSLIDLSSNYFQGTVADDRG-----R 380 (693)
Q Consensus 309 ~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~-~~~--~~~~~l~~ldLs~N~l~g~ip~~~~-----~ 380 (693)
.+++|+.|++++|++++..|. .+..+++|+.|++++|.+.+. +|. ..+++|+.|||++|.+++..|..+. +
T Consensus 422 ~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 500 (606)
T 3vq2_A 422 SLEKLLYLDISYTNTKIDFDG-IFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQ 500 (606)
T ss_dssp TCTTCCEEECTTSCCEECCTT-TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccccCCEEECcCCCCCccchh-hhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCC
Confidence 778888888888888776663 456677788888888887763 443 4567777888888888777776554 3
Q ss_pred ccccCCCcCCCC
Q 035786 381 NVSLGRNCLQSV 392 (693)
Q Consensus 381 ~~~l~~n~l~g~ 392 (693)
.+++++|.+.+.
T Consensus 501 ~L~Ls~N~l~~~ 512 (606)
T 3vq2_A 501 LLNMSHNNLLFL 512 (606)
T ss_dssp EEECCSSCCSCE
T ss_pred EEECCCCcCCCc
Confidence 566777777664
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=307.91 Aligned_cols=166 Identities=17% Similarity=0.266 Sum_probs=137.6
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||+||+|+. .+|+.||||++...... .+.|.+|+++|++++|||||++++++.+ ++..|+||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-NGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-CCEEEEEE
Confidence 4577888999999999999996 56999999999754433 4679999999999999999999998875 46899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
|||++|+|.++|+.... ..+++.+...|+.||+.||+|||+. +||||||||+||||++++.+||+|||+|+
T Consensus 103 Ey~~gg~L~~~i~~~~~------~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 173 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKG------VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIAR 173 (350)
T ss_dssp ECCTTCBHHHHHHHTTT------CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEES
T ss_pred eCCCCCcHHHHHHHcCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccce
Confidence 99999999999975432 3478999999999999999999998 99999999999999999999999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... ..+..+||++|||
T Consensus 174 ~~~~~~~-~~~~~~GT~~YmA 193 (350)
T 4b9d_A 174 VLNSTVE-LARACIGTPYYLS 193 (350)
T ss_dssp CCCHHHH-HHHHHHSCCTTCC
T ss_pred eecCCcc-cccccCCCccccC
Confidence 8754322 2345789999987
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=331.25 Aligned_cols=311 Identities=21% Similarity=0.261 Sum_probs=238.8
Q ss_pred CCEeEEEcCCCCccccc-----------------ccCCccCccccc--cCCCCCEEEccCCCCCCcCchHhhhCCCCccE
Q 035786 62 GQVIAINISGFKRTRIG-----------------RLNPRFAVDSLG--NLTLLSSFNASGLSLPGSIPEWFGYRLPALQV 122 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g-----------------~~~~~~~~~~l~--~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~ 122 (693)
.+...|+|++... .| .+|+ .++ ++++|+.|++++|.+.|.+|..++. +++|++
T Consensus 448 ~~L~~L~Ls~N~L--sg~~i~~~~~~~s~n~~~g~iP~-----~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~-L~~L~~ 519 (876)
T 4ecn_A 448 TKLQIIYFANSPF--TYDNIAVDWEDANSDYAKQYENE-----ELSWSNLKDLTDVELYNCPNMTQLPDFLYD-LPELQS 519 (876)
T ss_dssp TTCCEEEEESCCC--CGGGBSSSCSCTTSHHHHHHTTS-----CCCGGGCTTCCEEEEESCTTCCSCCGGGGG-CSSCCE
T ss_pred CCCCEEECcCCcC--CCCcccccccccccccccccCCh-----hhhhccCCCCCEEECcCCCCCccChHHHhC-CCCCCE
Confidence 4677888887553 24 2443 555 8999999999999999999998875 999999
Q ss_pred EEecCCC-CCc-CCCcccCCCc-------cCCEEecccCcCCccCcc--ccCCCCCCCEEEccCCCCCCcCchhhhcCcC
Q 035786 123 LDLRSCS-LSG-SIPGSFGNLS-------RLNVLYLSGNSLAGNVPA--TLGELKKLSNLDLSRNLLTGEIPNAISLLGN 191 (693)
Q Consensus 123 L~Ls~n~-l~g-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 191 (693)
|+|++|+ ++| .+|..+++++ +|++|+|++|.++ .+|. .++++++|++|+|++|.++ .+| .+..+++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc
Confidence 9999998 998 8887766655 9999999999998 8888 8999999999999999998 888 8889999
Q ss_pred CCeeecccccCCCcCcccccCCCC-CCEEEccCCcccccCCccccCCCC--CCEEEccCCcCcccCchh---hh--cCcc
Q 035786 192 LTRLNLASNFFTGQIPSGLYSLSS-IQFLNLSDNALTGFIPSEVGNLDK--LIELDLSKNSISGSLPLE---LR--GLRN 263 (693)
Q Consensus 192 L~~L~Ls~N~l~g~~p~~~~~l~~-L~~L~Ls~N~l~g~~p~~~~~l~~--L~~L~Ls~N~l~g~~p~~---~~--~l~~ 263 (693)
|+.|+|++|.++ .+|..+..+++ |+.|+|++|+++ .+|..+..++. |+.|++++|++++.+|.. +. .+++
T Consensus 597 L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~ 674 (876)
T 4ecn_A 597 LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674 (876)
T ss_dssp ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCC
T ss_pred ceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCC
Confidence 999999999998 88888999988 999999999998 77888777654 888888888888766532 22 3347
Q ss_pred ccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCC--------CCCEEEccCCcCcccCCccCc-CC
Q 035786 264 LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRP--------NLRFLDLSRNNITGSWPILST-NG 334 (693)
Q Consensus 264 L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~--------~L~~L~Ls~N~l~g~~p~~~~-~~ 334 (693)
|+.|+|++|.++ .+|..++..+++|+.|+|++|+++ .+|..+.... +|+.|+|++|+|+ .+|.... ..
T Consensus 675 L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~ 751 (876)
T 4ecn_A 675 ASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATT 751 (876)
T ss_dssp EEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTT
T ss_pred cCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhcc
Confidence 777778777777 566666666777777777777777 5555544322 7777777777777 5664332 36
Q ss_pred CCCCcEEEccCCccceecCC--CCCCCCCEEEccC------CcceeecCCCcC-----cccccCCCcC
Q 035786 335 NASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSS------NYFQGTVADDRG-----RNVSLGRNCL 389 (693)
Q Consensus 335 ~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~------N~l~g~ip~~~~-----~~~~l~~n~l 389 (693)
+++|+.|+|++|++++ +|. ..+++|+.|+|++ |.+.+.+|..+. +.+++++|.+
T Consensus 752 l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 752 LPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp CTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred CCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 6777777777777776 554 4567777777755 667777776654 2466777777
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=320.38 Aligned_cols=326 Identities=26% Similarity=0.303 Sum_probs=189.5
Q ss_pred CCCCcceeecC-------------CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCC
Q 035786 51 CRSWRGVQCQN-------------GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRL 117 (693)
Q Consensus 51 C~~W~gv~C~~-------------~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l 117 (693)
| .|.|| |+. .+++.++|++... ..+++ ..+.++++|++|++++|.+.+..|..|. .+
T Consensus 4 C-~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l---~~~~~----~~~~~l~~L~~L~Ls~n~i~~~~~~~~~-~l 73 (549)
T 2z81_A 4 C-DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKI---TYIGH----GDLRACANLQVLILKSSRINTIEGDAFY-SL 73 (549)
T ss_dssp E-CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCC---CEECS----STTSSCTTCCEEECTTSCCCEECTTTTT-TC
T ss_pred C-CCCce-EECCCCccccccccCCCCccEEECcCCcc---CccCh----hhhhcCCcccEEECCCCCcCccChhhcc-cc
Confidence 5 79998 862 1577888887542 22222 2456677777777777777766666665 37
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCc-cCccccCCCCCCCEEEccCCCCCCcCc-hhhhcCcCCCee
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAG-NVPATLGELKKLSNLDLSRNLLTGEIP-NAISLLGNLTRL 195 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L 195 (693)
++|++|+|++|.+++..|..|+++++|++|+|++|.+++ ..|..++++++|++|++++|.+.+.+| ..+..+++|++|
T Consensus 74 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L 153 (549)
T 2z81_A 74 GSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNEL 153 (549)
T ss_dssp TTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred ccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCee
Confidence 777777777777776666667777777777777777765 345666777777777777776444444 456666667777
Q ss_pred ecccccCCCcCcccccC------------------------CCCCCEEEccCCccccc----------------------
Q 035786 196 NLASNFFTGQIPSGLYS------------------------LSSIQFLNLSDNALTGF---------------------- 229 (693)
Q Consensus 196 ~Ls~N~l~g~~p~~~~~------------------------l~~L~~L~Ls~N~l~g~---------------------- 229 (693)
++++|.+++.+|..+.. +++|++|++++|++++.
T Consensus 154 ~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n 233 (549)
T 2z81_A 154 EIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGS 233 (549)
T ss_dssp EEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESC
T ss_pred eccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceecccc
Confidence 77766666655555443 44556666666665542
Q ss_pred --------------------------------------------------------------------------------
Q 035786 230 -------------------------------------------------------------------------------- 229 (693)
Q Consensus 230 -------------------------------------------------------------------------------- 229 (693)
T Consensus 234 ~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~ 313 (549)
T 2z81_A 234 VLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVK 313 (549)
T ss_dssp EEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCC
T ss_pred ccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccce
Confidence
Q ss_pred -----------CCccc-cCCCCCCEEEccCCcCcccCch---hhhcCccccccccccccccccCC-CcccCCCCCCCEEE
Q 035786 230 -----------IPSEV-GNLDKLIELDLSKNSISGSLPL---ELRGLRNLAKLVISENGLEGQLS-EGLFPTLDQLQVVD 293 (693)
Q Consensus 230 -----------~p~~~-~~l~~L~~L~Ls~N~l~g~~p~---~~~~l~~L~~L~Ls~N~l~g~i~-~~~~~~l~~L~~L~ 293 (693)
+|..+ .++++|++|++++|++++.+|. .++.+++|++|++++|++++..+ ...+..+++|++|+
T Consensus 314 ~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~ 393 (549)
T 2z81_A 314 RITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLD 393 (549)
T ss_dssp EEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEE
T ss_pred EEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEE
Confidence 11111 1234444444444444443322 13344444444444444432111 01234445555555
Q ss_pred ccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcceee
Q 035786 294 LSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGT 373 (693)
Q Consensus 294 Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g~ 373 (693)
+++|+++ .+|..+..+++|++|++++|++++ +|.. ....|+.|++++|++++.+ ..+++|+.|||++|+++ .
T Consensus 394 Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~---~~~~L~~L~Ls~N~l~~~~--~~l~~L~~L~Ls~N~l~-~ 465 (549)
T 2z81_A 394 ISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTC---IPQTLEVLDVSNNNLDSFS--LFLPRLQELYISRNKLK-T 465 (549)
T ss_dssp CTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTT---SCTTCSEEECCSSCCSCCC--CCCTTCCEEECCSSCCS-S
T ss_pred CCCCCCc-cCChhhcccccccEEECCCCCccc-ccch---hcCCceEEECCCCChhhhc--ccCChhcEEECCCCccC-c
Confidence 5555555 344445555555555555555542 2211 1235666666666666543 36778999999999998 6
Q ss_pred cCCCcC----cccccCCCcCCCCcc
Q 035786 374 VADDRG----RNVSLGRNCLQSVAS 394 (693)
Q Consensus 374 ip~~~~----~~~~l~~n~l~g~~~ 394 (693)
+|.... +.+++++|.+++.++
T Consensus 466 ip~~~~l~~L~~L~Ls~N~l~~~~~ 490 (549)
T 2z81_A 466 LPDASLFPVLLVMKISRNQLKSVPD 490 (549)
T ss_dssp CCCGGGCTTCCEEECCSSCCCCCCT
T ss_pred CCCcccCccCCEEecCCCccCCcCH
Confidence 775321 367889999887653
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-35 Score=309.07 Aligned_cols=184 Identities=18% Similarity=0.254 Sum_probs=148.3
Q ss_pred cCHHHHHHHhCCCCccCccccCCeeeEEEEEeCC------CcEEEEEEecccccC--HHHHHHHHHHHhcCCC-CCccce
Q 035786 502 FTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSFK--KESYMMELDLFSRVSH-ARLVPL 572 (693)
Q Consensus 502 ~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~------g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H-~niv~l 572 (693)
+...+++-..++|...+.||+|+||+||+|++.+ ++.||||++...... .++|.+|+++|.+++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3344454455678888999999999999998642 468999999764433 4679999999999965 899999
Q ss_pred eEEEEcCCCeeEEEEccCCCCChhhhhhccCCC--------CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecC
Q 035786 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDL--------EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRD 644 (693)
Q Consensus 573 ~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~--------~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrD 644 (693)
+|+|.+.++..++|||||++|+|.++|+..... .......++|.+++.|+.|||+||+|||+. +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 999986555689999999999999999853210 011234599999999999999999999998 999999
Q ss_pred CCCCCeeeCCCCceEECCcccccccCCCCc-ceeeeeehhhhhhh
Q 035786 645 VQASSILLDDKFEVRLGSLSELHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 645 lk~~NILld~~~~~ki~Dfgla~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
|||+|||+++++.+||+|||+||.+..... ...+..+||+.|||
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymA 255 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 255 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCC
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccC
Confidence 999999999999999999999998744332 23445778888887
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=296.91 Aligned_cols=161 Identities=18% Similarity=0.295 Sum_probs=136.4
Q ss_pred ccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC---CCeeEEEEc
Q 035786 516 ETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH---ETEKLLVYK 588 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~---~~~~~lv~e 588 (693)
..+.||+|+||+||+|... ++..||||++...... .+.|.+|+++|++++|||||+++++|.+. +...+||||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE 109 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence 3457999999999999974 5889999999654332 46799999999999999999999988542 234789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CCCceEECCccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DKFEVRLGSLSELH 667 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~~~~ki~Dfgla~ 667 (693)
||++|+|.+++++. ..+++.....|+.||+.||+|||++ .|+||||||||+||||+ +++.+||+|||+|+
T Consensus 110 y~~gg~L~~~l~~~--------~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 110 LMTSGTLKTYLKRF--------KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp CCCSCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred CCCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 99999999999864 2489999999999999999999986 34699999999999998 47999999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
...... .+..+||+.|||
T Consensus 181 ~~~~~~---~~~~~GTp~YmA 198 (290)
T 3fpq_A 181 LKRASF---AKAVIGTPEFMA 198 (290)
T ss_dssp GCCTTS---BEESCSSCCCCC
T ss_pred eCCCCc---cCCcccCccccC
Confidence 764332 345789999987
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=315.16 Aligned_cols=321 Identities=16% Similarity=0.112 Sum_probs=272.8
Q ss_pred CEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCc
Q 035786 63 QVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLS 142 (693)
Q Consensus 63 ~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~ 142 (693)
.++.++|++... ..+++ ..+.++++|++|++++|.+.+..|..|. .+++|++|+|++|.+++..|..|++++
T Consensus 34 ~l~~L~Ls~n~i---~~~~~----~~~~~l~~L~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 105 (606)
T 3t6q_A 34 STECLEFSFNVL---PTIQN----TTFSRLINLTFLDLTRCQIYWIHEDTFQ-SQHRLDTLVLTANPLIFMAETALSGPK 105 (606)
T ss_dssp TCCEEECTTCCC---SEECT----TTSTTCTTCSEEECTTCCCCEECTTTTT-TCTTCCEEECTTCCCSEECTTTTSSCT
T ss_pred cCcEEEccCCcc---CcCCh----hHhccCccceEEECCCCccceeChhhcc-CccccCeeeCCCCcccccChhhhcccc
Confidence 577888887543 22322 3678999999999999999988888886 499999999999999999999999999
Q ss_pred cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCC--EEE
Q 035786 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQ--FLN 220 (693)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~--~L~ 220 (693)
+|++|+|++|.+++..|..++++++|++|+|++|.+++..+..+..+++|++|++++|.+++..|..++.+++|+ .|+
T Consensus 106 ~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~ 185 (606)
T 3t6q_A 106 ALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLN 185 (606)
T ss_dssp TCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEE
T ss_pred cccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEe
Confidence 999999999999987788899999999999999999974434455599999999999999988888899999999 899
Q ss_pred ccCCcccccCCccccCC---------------------------------------------------CCCCEEEccCCc
Q 035786 221 LSDNALTGFIPSEVGNL---------------------------------------------------DKLIELDLSKNS 249 (693)
Q Consensus 221 Ls~N~l~g~~p~~~~~l---------------------------------------------------~~L~~L~Ls~N~ 249 (693)
+++|++++..|..+... .+|+.|++++|.
T Consensus 186 l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~ 265 (606)
T 3t6q_A 186 LNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHY 265 (606)
T ss_dssp CTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCC
T ss_pred cCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCc
Confidence 99999998877665432 167888889999
Q ss_pred CcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCc
Q 035786 250 ISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPI 329 (693)
Q Consensus 250 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~ 329 (693)
+++..+..|..+++|++|++++|.++ .+|.. +..+++|++|++++|++++..|..+..+++|+.|++++|++.+.+|.
T Consensus 266 l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~-l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 343 (606)
T 3t6q_A 266 FFNISSNTFHCFSGLQELDLTATHLS-ELPSG-LVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGT 343 (606)
T ss_dssp CSSCCTTTTTTCTTCSEEECTTSCCS-CCCSS-CCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCS
T ss_pred cCccCHHHhccccCCCEEeccCCccC-CCChh-hcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccch
Confidence 98888888999999999999999998 67776 47889999999999999988888999999999999999999998887
Q ss_pred cCcCCCCCCcEEEccCCccceec--CC--CCCCCCCEEEccCCcceeecCCCcC-----cccccCCCcCCCCc
Q 035786 330 LSTNGNASGAVFNISNNMLYGDL--NS--SSFRKFSLIDLSSNYFQGTVADDRG-----RNVSLGRNCLQSVA 393 (693)
Q Consensus 330 ~~~~~~~~l~~l~ls~N~l~g~~--~~--~~~~~l~~ldLs~N~l~g~ip~~~~-----~~~~l~~n~l~g~~ 393 (693)
..+..+..|+.|++++|.+.+.. +. ..+++|+.|++++|.+++..|..+. +.+++++|.+.+..
T Consensus 344 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 416 (606)
T 3t6q_A 344 GCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKD 416 (606)
T ss_dssp STTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCT
T ss_pred hhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcc
Confidence 77788899999999999998765 33 6778999999999999988887664 35778888776653
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=298.20 Aligned_cols=165 Identities=19% Similarity=0.282 Sum_probs=144.2
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...++||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||++++++.+ ++..|+|
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-DEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence 3578889999999999999986 579999999997532 235679999999999999999999998865 5689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
||||++|+|.+++++.. .++..+...|+.||+.||+|||++ +||||||||+|||+++++.+||+|||+|
T Consensus 111 mEy~~gG~L~~~i~~~~--------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla 179 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG--------SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTA 179 (311)
T ss_dssp ECCCTTEEHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EecCCCCCHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCc
Confidence 99999999999997643 488999999999999999999998 9999999999999999999999999999
Q ss_pred cccCC-CCcceeeeeehhhhhhh
Q 035786 667 HAQGD-SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~-~~~~~~~~~~~~~~y~a 688 (693)
+.+.. ........++||++|||
T Consensus 180 ~~~~~~~~~~~~~~~~GTp~YmA 202 (311)
T 4aw0_A 180 KVLSPESKQARANSFVGTAQYVS 202 (311)
T ss_dssp EECCTTTTCCCBCCCCSCGGGCC
T ss_pred eecCCCCCcccccCcccCcccCC
Confidence 98743 33334556899999997
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-33 Score=311.87 Aligned_cols=290 Identities=19% Similarity=0.178 Sum_probs=154.6
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCc-cCccccCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAG-NVPATLGELK 166 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~ 166 (693)
.+.++++|++|++++|.+.+..|..|. .+++|++|+|++|.++ .+|.. .+++|++|+|++|.+++ .+|..|++++
T Consensus 40 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~ 115 (520)
T 2z7x_B 40 DILSLSKLRILIISHNRIQYLDISVFK-FNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMS 115 (520)
T ss_dssp HHTTCTTCCEEECCSSCCCEEEGGGGT-TCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCT
T ss_pred hccccccccEEecCCCccCCcChHHhh-cccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCC
Confidence 455566666666666666655555554 3666666666666665 34443 56666666666666655 3555666666
Q ss_pred CCCEEEccCCCCCCcCchhhhcCcCC--CeeecccccC--CCcCcccccCCC----------------------------
Q 035786 167 KLSNLDLSRNLLTGEIPNAISLLGNL--TRLNLASNFF--TGQIPSGLYSLS---------------------------- 214 (693)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~g~~p~~~~~l~---------------------------- 214 (693)
+|++|+|++|.+++ ..+..+++| +.|++++|.+ .+..|..+..+.
T Consensus 116 ~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L 192 (520)
T 2z7x_B 116 QLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANL 192 (520)
T ss_dssp TCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEE
T ss_pred cceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccce
Confidence 66666666666654 234455555 6666666666 445554444422
Q ss_pred -------------------------------------------------------CCCEEEccCCcccccCCccc-----
Q 035786 215 -------------------------------------------------------SIQFLNLSDNALTGFIPSEV----- 234 (693)
Q Consensus 215 -------------------------------------------------------~L~~L~Ls~N~l~g~~p~~~----- 234 (693)
+|+.|++++|+++|.+|..+
T Consensus 193 ~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~ 272 (520)
T 2z7x_B 193 ELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSG 272 (520)
T ss_dssp EECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCS
T ss_pred eeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhccc
Confidence 44444555555555555544
Q ss_pred cCCCCCCEEEccCCcCcccCc-hhhhcC---ccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCC
Q 035786 235 GNLDKLIELDLSKNSISGSLP-LELRGL---RNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR 310 (693)
Q Consensus 235 ~~l~~L~~L~Ls~N~l~g~~p-~~~~~l---~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~ 310 (693)
+++++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.+.. .+..+++|++|++++|++++.+|..+..+
T Consensus 273 ~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~---~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 347 (520)
T 2z7x_B 273 TSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML---CPSKISPFLHLDFSNNLLTDTVFENCGHL 347 (520)
T ss_dssp CCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC---CCSSCCCCCEEECCSSCCCTTTTTTCCCC
T ss_pred ccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc---chhhCCcccEEEeECCccChhhhhhhccC
Confidence 4444444444444444 222 222111 22333333333222110 01345566666666666666666666666
Q ss_pred CCCCEEEccCCcCcc--cCCccCcCCCCCCcEEEccCCccceecCC---CCCCCCCEEEccCCcceeecCCCcC---ccc
Q 035786 311 PNLRFLDLSRNNITG--SWPILSTNGNASGAVFNISNNMLYGDLNS---SSFRKFSLIDLSSNYFQGTVADDRG---RNV 382 (693)
Q Consensus 311 ~~L~~L~Ls~N~l~g--~~p~~~~~~~~~l~~l~ls~N~l~g~~~~---~~~~~l~~ldLs~N~l~g~ip~~~~---~~~ 382 (693)
++|++|+|++|++++ .+|. .+..+++|+.|++++|.+.+.+|. ..+++|+.|++++|.+++.+|..+. +.+
T Consensus 348 ~~L~~L~L~~N~l~~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L 426 (520)
T 2z7x_B 348 TELETLILQMNQLKELSKIAE-MTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVL 426 (520)
T ss_dssp SSCCEEECCSSCCCBHHHHHH-HHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEE
T ss_pred CCCCEEEccCCccCccccchH-HHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEE
Confidence 666666666666664 3332 234556666666666666654443 3345566666666666666555443 245
Q ss_pred ccCCCcCC
Q 035786 383 SLGRNCLQ 390 (693)
Q Consensus 383 ~l~~n~l~ 390 (693)
++++|.+.
T Consensus 427 ~Ls~N~l~ 434 (520)
T 2z7x_B 427 DLHSNKIK 434 (520)
T ss_dssp ECCSSCCC
T ss_pred ECCCCccc
Confidence 56666555
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=307.66 Aligned_cols=163 Identities=20% Similarity=0.299 Sum_probs=143.7
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.|...+.||+|+||+||+|+. .+|+.||||++...... .+.+.+|+++|++++|||||+++++|.+ ++..||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-CCEEEEEEeC
Confidence 4577788999999999999996 46999999999764433 5679999999999999999999999876 4689999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
|++|+|.++++. ..+++.+...|+.||+.||+|||+. +||||||||+||||++++.+||+|||+|+.+
T Consensus 230 ~~gG~L~~~i~~---------~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~ 297 (423)
T 4fie_A 230 LEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 297 (423)
T ss_dssp CTTEEHHHHHHH---------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEEC
T ss_pred CCCCcHHHHHhc---------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceEC
Confidence 999999999974 2389999999999999999999998 9999999999999999999999999999987
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
...... .+.++||++|||
T Consensus 298 ~~~~~~-~~~~~GTp~YmA 315 (423)
T 4fie_A 298 SKEVPR-RKSLVGTPYWMA 315 (423)
T ss_dssp CSSCCC-BCCCEECTTTCC
T ss_pred CCCCcc-ccccccCcCcCC
Confidence 544332 456889999997
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-33 Score=308.67 Aligned_cols=312 Identities=22% Similarity=0.185 Sum_probs=276.6
Q ss_pred CCcceeecCC-----------CEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCcc
Q 035786 53 SWRGVQCQNG-----------QVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQ 121 (693)
Q Consensus 53 ~W~gv~C~~~-----------~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~ 121 (693)
.|..|.|... .++.|+|++... ..+++ ..+.++++|++|++++|.+.+..|..|. .+++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l---~~~~~----~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~ 83 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRI---KTLNQ----DEFASFPHLEELELNENIVSAVEPGAFN-NLFNLR 83 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCC---CEECT----TTTTTCTTCCEEECTTSCCCEECTTTTT-TCTTCC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCcc---ceECH----hHccCCCCCCEEECCCCccCEeChhhhh-CCccCC
Confidence 5788999632 456777776432 22322 3678999999999999999988888886 499999
Q ss_pred EEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccccc
Q 035786 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201 (693)
Q Consensus 122 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 201 (693)
+|+|++|.+++..+..|+++++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|..+++|+.|++++|.
T Consensus 84 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 163 (477)
T 2id5_A 84 TLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 163 (477)
T ss_dssp EEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCC
T ss_pred EEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCc
Confidence 99999999998777789999999999999999999999999999999999999999999889999999999999999999
Q ss_pred CCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCc
Q 035786 202 FTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEG 281 (693)
Q Consensus 202 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~ 281 (693)
+++..+..+..+++|+.|+|++|.+++..+..|..+++|+.|++++|.+.+.+|.......+|++|++++|+++ .+|..
T Consensus 164 l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~ 242 (477)
T 2id5_A 164 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYL 242 (477)
T ss_dssp CSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-SCCHH
T ss_pred CcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-ccCHH
Confidence 99877778999999999999999999998889999999999999999998888888877889999999999998 56766
Q ss_pred ccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCC
Q 035786 282 LFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRK 359 (693)
Q Consensus 282 ~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~ 359 (693)
.|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..| ..+..+++|+.|++++|++++..+. ..+++
T Consensus 243 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 321 (477)
T 2id5_A 243 AVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP-YAFRGLNYLRVLNVSGNQLTTLEESVFHSVGN 321 (477)
T ss_dssp HHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECT-TTBTTCTTCCEEECCSSCCSCCCGGGBSCGGG
T ss_pred HhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECH-HHhcCcccCCEEECCCCcCceeCHhHcCCCcc
Confidence 67899999999999999999888899999999999999999998777 4667889999999999999875543 45678
Q ss_pred CCEEEccCCcceeec
Q 035786 360 FSLIDLSSNYFQGTV 374 (693)
Q Consensus 360 l~~ldLs~N~l~g~i 374 (693)
|+.|+|++|++++..
T Consensus 322 L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 322 LETLILDSNPLACDC 336 (477)
T ss_dssp CCEEECCSSCEECSG
T ss_pred cCEEEccCCCccCcc
Confidence 999999999998754
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=326.11 Aligned_cols=305 Identities=24% Similarity=0.261 Sum_probs=166.6
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcc--cCCCccCCEEecccCcCCccCc-cccCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGS--FGNLSRLNVLYLSGNSLAGNVP-ATLGE 164 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 164 (693)
.+.++++|++|++++|.+.+..|..|. .+++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..| ..|++
T Consensus 68 ~f~~L~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~ 146 (844)
T 3j0a_A 68 AFRNLPNLRILDLGSSKIYFLHPDAFQ-GLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGK 146 (844)
T ss_dssp TTSSCTTCCEEECTTCCCCEECTTSSC-SCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGT
T ss_pred HhcCCCCCCEEECCCCcCcccCHhHcc-CCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhh
Confidence 456666666666666666666566554 3666666666666666655443 6666666666666666665443 35666
Q ss_pred CCCCCEEEccCCCCCCcCchhhhcC--cC------------------------------CCeeeccccc-----------
Q 035786 165 LKKLSNLDLSRNLLTGEIPNAISLL--GN------------------------------LTRLNLASNF----------- 201 (693)
Q Consensus 165 l~~L~~L~Ls~N~l~~~~p~~~~~l--~~------------------------------L~~L~Ls~N~----------- 201 (693)
+++|++|+|++|.+++..|..+..+ ++ |+.|++++|.
T Consensus 147 L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 226 (844)
T 3j0a_A 147 LNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSN 226 (844)
T ss_dssp CSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGG
T ss_pred CCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHh
Confidence 6666666666666655544443322 12 2233333332
Q ss_pred ---------------------------------------------------CCCcCcccccCCCCCCEEEccCCcccccC
Q 035786 202 ---------------------------------------------------FTGQIPSGLYSLSSIQFLNLSDNALTGFI 230 (693)
Q Consensus 202 ---------------------------------------------------l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 230 (693)
+++..|..+..+++|+.|+|++|++++..
T Consensus 227 ~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 306 (844)
T 3j0a_A 227 AISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIA 306 (844)
T ss_dssp TSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEEC
T ss_pred hcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCC
Confidence 22222233333444444444444444444
Q ss_pred CccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcC-------
Q 035786 231 PSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGAL------- 303 (693)
Q Consensus 231 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~------- 303 (693)
|..|..+++|++|+|++|.+++..|..|.++++|++|++++|.+++ ++...|..+++|+.|++++|.+++..
T Consensus 307 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~ 385 (844)
T 3j0a_A 307 DEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAI-IQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPD 385 (844)
T ss_dssp TTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCC-CCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSE
T ss_pred hHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCc-cChhhhcCCCCCCEEECCCCCCCcccCCCCcch
Confidence 4444444555555555555544444445555555555555554432 22233444555555555555544310
Q ss_pred -----------c----------------------ccccCCCCCCEEEccCCcCcccCCc---------------------
Q 035786 304 -----------P----------------------ATLFLRPNLRFLDLSRNNITGSWPI--------------------- 329 (693)
Q Consensus 304 -----------p----------------------~~l~~~~~L~~L~Ls~N~l~g~~p~--------------------- 329 (693)
| ..+..+++|+.|+|++|++++..+.
T Consensus 386 L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~ 465 (844)
T 3j0a_A 386 IFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQL 465 (844)
T ss_dssp EEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSS
T ss_pred hccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcccc
Confidence 0 0112344555555555555432111
Q ss_pred --------cCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCCcC---cccccCCCcCCCCcc
Q 035786 330 --------LSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADDRG---RNVSLGRNCLQSVAS 394 (693)
Q Consensus 330 --------~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~---~~~~l~~n~l~g~~~ 394 (693)
..+..++.|+.|+|++|++++.+|. ..+++|+.|||++|++++-.|..+. +.+++++|.+.+.++
T Consensus 466 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~ 543 (844)
T 3j0a_A 466 AWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNP 543 (844)
T ss_dssp SCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCS
T ss_pred ccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCCh
Confidence 1233456788889999998877665 5678888999999988876555443 356778888877654
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-32 Score=310.58 Aligned_cols=319 Identities=19% Similarity=0.178 Sum_probs=220.0
Q ss_pred CEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCc
Q 035786 63 QVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLS 142 (693)
Q Consensus 63 ~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~ 142 (693)
+.+.++|++... ..+.| ..+.++++|++|++++|.+.+..|..++ .+++|++|+|++|.+++..|..|++++
T Consensus 58 ~L~~L~Ls~n~i---~~~~~----~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~n~i~~l~~~~~~~l~ 129 (606)
T 3t6q_A 58 NLTFLDLTRCQI---YWIHE----DTFQSQHRLDTLVLTANPLIFMAETALS-GPKALKHLFFIQTGISSIDFIPLHNQK 129 (606)
T ss_dssp TCSEEECTTCCC---CEECT----TTTTTCTTCCEEECTTCCCSEECTTTTS-SCTTCCEEECTTSCCSCGGGSCCTTCT
T ss_pred cceEEECCCCcc---ceeCh----hhccCccccCeeeCCCCcccccChhhhc-ccccccEeeccccCcccCCcchhccCC
Confidence 567778876432 22222 3678899999999999999888888876 499999999999999887778889999
Q ss_pred cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCC--eeecccccCCCcCcc------------
Q 035786 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLT--RLNLASNFFTGQIPS------------ 208 (693)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~--~L~Ls~N~l~g~~p~------------ 208 (693)
+|++|+|++|.+.+..++.+..+++|++|++++|.+++..|..+..+++|+ .|++++|.+++..|.
T Consensus 130 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l 209 (606)
T 3t6q_A 130 TLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNF 209 (606)
T ss_dssp TCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEEC
T ss_pred cccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhcccccccc
Confidence 999999999999875444455588999999999998887788888888877 677777776654443
Q ss_pred ---------------------------------------------------------------cccCCCCCCEEEccCCc
Q 035786 209 ---------------------------------------------------------------GLYSLSSIQFLNLSDNA 225 (693)
Q Consensus 209 ---------------------------------------------------------------~~~~l~~L~~L~Ls~N~ 225 (693)
.+..+++|++|++++|+
T Consensus 210 ~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 289 (606)
T 3t6q_A 210 GGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATH 289 (606)
T ss_dssp TTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSC
T ss_pred CCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCc
Confidence 24455666666666666
Q ss_pred ccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcC--
Q 035786 226 LTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGAL-- 303 (693)
Q Consensus 226 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~-- 303 (693)
++ .+|..+.++++|++|++++|.+++..|..+.++++|++|++++|.+.+.++...+..+++|+.|++++|.+++..
T Consensus 290 l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 368 (606)
T 3t6q_A 290 LS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCC 368 (606)
T ss_dssp CS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEES
T ss_pred cC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCc
Confidence 66 456666666666666666666666666666666666666666666666666655566666666666666666554
Q ss_pred cccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC---CCCCCCCEEEccCCcceeecCCCcC-
Q 035786 304 PATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS---SSFRKFSLIDLSSNYFQGTVADDRG- 379 (693)
Q Consensus 304 p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~---~~~~~l~~ldLs~N~l~g~ip~~~~- 379 (693)
|..+..+++|+.|++++|++++..| ..+..+++|+.|++++|.+.+..+. ..+++|+.|++++|.+++..|..+.
T Consensus 369 ~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 447 (606)
T 3t6q_A 369 NLQLRNLSHLQSLNLSYNEPLSLKT-EAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDG 447 (606)
T ss_dssp TTTTTTCTTCCEEECCSCSCEEECT-TTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTT
T ss_pred chhcccCCCCCEEECCCCcCCcCCH-HHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhC
Confidence 5566666666666666666665544 2445566666666666666655443 3455666666666666666555443
Q ss_pred ----cccccCCCcCCC
Q 035786 380 ----RNVSLGRNCLQS 391 (693)
Q Consensus 380 ----~~~~l~~n~l~g 391 (693)
+.+.+++|.+.+
T Consensus 448 l~~L~~L~L~~n~l~~ 463 (606)
T 3t6q_A 448 LPALQHLNLQGNHFPK 463 (606)
T ss_dssp CTTCCEEECTTCBCGG
T ss_pred CCCCCEEECCCCCCCc
Confidence 245556665544
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=308.43 Aligned_cols=290 Identities=19% Similarity=0.214 Sum_probs=210.7
Q ss_pred cccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCc-CCCcccCCCccCCEEecccCcCCccCccccCCC
Q 035786 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSG-SIPGSFGNLSRLNVLYLSGNSLAGNVPATLGEL 165 (693)
Q Consensus 87 ~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 165 (693)
..+.++++|++|++++|.+. .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|+|++|.+++ ..+..+
T Consensus 63 ~~~~~l~~L~~L~Ls~N~l~-~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l 135 (520)
T 2z7x_B 63 SVFKFNQELEYLDLSHNKLV-KISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPI 135 (520)
T ss_dssp GGGTTCTTCCEEECCSSCCC-EEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGG
T ss_pred HHhhcccCCCEEecCCCcee-ecCcc---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhcccc
Confidence 46889999999999999998 68876 49999999999999998 589999999999999999999986 356667
Q ss_pred CCC--CEEEccCCCC--CCcCchhhhcCc---------------------------------------------------
Q 035786 166 KKL--SNLDLSRNLL--TGEIPNAISLLG--------------------------------------------------- 190 (693)
Q Consensus 166 ~~L--~~L~Ls~N~l--~~~~p~~~~~l~--------------------------------------------------- 190 (693)
++| ++|++++|.+ ++..|..+..+.
T Consensus 136 ~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~ 215 (520)
T 2z7x_B 136 AHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAK 215 (520)
T ss_dssp TTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHG
T ss_pred ccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhh
Confidence 777 8888888888 666666555432
Q ss_pred --------------------------------CCCeeecccccCCCcCcccc-----cCCCCCCEEEccCCcccccCCc-
Q 035786 191 --------------------------------NLTRLNLASNFFTGQIPSGL-----YSLSSIQFLNLSDNALTGFIPS- 232 (693)
Q Consensus 191 --------------------------------~L~~L~Ls~N~l~g~~p~~~-----~~l~~L~~L~Ls~N~l~g~~p~- 232 (693)
+|++|++++|.++|.+|..+ ..+++|+.+++++|.+ .+|.
T Consensus 216 l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~ 293 (520)
T 2z7x_B 216 LQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQS 293 (520)
T ss_dssp GGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTH
T ss_pred hccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchh
Confidence 68888888888888888877 5555555555555544 2220
Q ss_pred ------------------------c-ccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc--cCCCcccCC
Q 035786 233 ------------------------E-VGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG--QLSEGLFPT 285 (693)
Q Consensus 233 ------------------------~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~i~~~~~~~ 285 (693)
. +..+++|++|++++|++++.+|..+.++++|++|++++|++++ .+|.. +..
T Consensus 294 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~-~~~ 372 (520)
T 2z7x_B 294 YIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEM-TTQ 372 (520)
T ss_dssp HHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHH-HTT
T ss_pred hhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHH-Hhh
Confidence 0 1566777777777777777777777777777777777777765 33332 466
Q ss_pred CCCCCEEEccCCcCCCcCccc-ccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCE
Q 035786 286 LDQLQVVDLSGNKLDGALPAT-LFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSL 362 (693)
Q Consensus 286 l~~L~~L~Ls~N~l~g~~p~~-l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ 362 (693)
+++|++|++++|++++.+|.. +..+++|+.|++++|++++.+|... ...|+.|++++|+++ .+|. ..+++|+.
T Consensus 373 l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l---~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~ 448 (520)
T 2z7x_B 373 MKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL---PPRIKVLDLHSNKIK-SIPKQVVKLEALQE 448 (520)
T ss_dssp CTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSC---CTTCCEEECCSSCCC-CCCGGGGGCTTCCE
T ss_pred CCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhh---cccCCEEECCCCccc-ccchhhhcCCCCCE
Confidence 777777777777777755543 5667777777777777777666422 156777777777777 4554 45667777
Q ss_pred EEccCCcceeecCCC-cC-----cccccCCCcCCC
Q 035786 363 IDLSSNYFQGTVADD-RG-----RNVSLGRNCLQS 391 (693)
Q Consensus 363 ldLs~N~l~g~ip~~-~~-----~~~~l~~n~l~g 391 (693)
|||++|+++ .+|.. +. ..+++++|.+.+
T Consensus 449 L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 449 LNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp EECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred EECCCCcCC-ccCHHHhccCCcccEEECcCCCCcc
Confidence 777777777 46654 32 245666666554
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-32 Score=309.68 Aligned_cols=138 Identities=21% Similarity=0.132 Sum_probs=101.0
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+..|..+. .+++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDIS-FLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTT-TCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccChhhhc-cCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 5777888888887776666665 4888888888888888777777888888888888888887 45655 778888888
Q ss_pred ccCCCCCC-cCchhhhcCcCCCeeecccccCCCcCcccccCCCCC--CEEEccCCcc--cccCCccccCC
Q 035786 173 LSRNLLTG-EIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSI--QFLNLSDNAL--TGFIPSEVGNL 237 (693)
Q Consensus 173 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--~~L~Ls~N~l--~g~~p~~~~~l 237 (693)
|++|.+++ .+|..++++++|++|++++|.+++. .+..+++| +.|++++|++ ++..|..+..+
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l 194 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIP 194 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEEC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCccccccc
Confidence 88888876 4567788888888888888877653 34444444 7777777777 66666555543
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-34 Score=294.92 Aligned_cols=168 Identities=20% Similarity=0.322 Sum_probs=131.2
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCC--------
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHET-------- 581 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-------- 581 (693)
+|+..+.||+|+||+||+|+. .+|+.||||++.....+ .+.|.+|+++|++++|||||++++++.+.+.
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 477889999999999999996 47999999999754332 4679999999999999999999998865322
Q ss_pred ---eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 582 ---EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 582 ---~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
..|+|||||++|+|.++++.... ....++.....|+.||+.||+|||+. +||||||||+|||+++++.+
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~-----~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCT-----IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCS-----GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCC-----CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcE
Confidence 26899999999999999986432 12367888889999999999999998 99999999999999999999
Q ss_pred EECCcccccccCCCCc-----------ceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQ-----------NVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~-----------~~~~~~~~~~~y~a 688 (693)
||+|||+|+....... ...+..+||++|||
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmA 198 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMS 198 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSC
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccC
Confidence 9999999998733211 12345689999987
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-32 Score=308.76 Aligned_cols=310 Identities=21% Similarity=0.222 Sum_probs=234.0
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.+++.++|++... ..+++ ..+.++++|++|++++|.+.+..|..|. .+++|++|||++|.++ .+|.. .+
T Consensus 52 ~~L~~L~Ls~N~i---~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~-~lp~~--~l 120 (562)
T 3a79_B 52 PRTKALSLSQNSI---SELRM----PDISFLSELRVLRLSHNRIRSLDFHVFL-FNQDLEYLDVSHNRLQ-NISCC--PM 120 (562)
T ss_dssp TTCCEEECCSSCC---CCCCG----GGTTTCTTCCEEECCSCCCCEECTTTTT-TCTTCCEEECTTSCCC-EECSC--CC
T ss_pred CCcCEEECCCCCc---cccCh----hhhccCCCccEEECCCCCCCcCCHHHhC-CCCCCCEEECCCCcCC-ccCcc--cc
Confidence 3567777776432 22322 4678899999999999999987788776 4999999999999998 56666 89
Q ss_pred ccCCEEecccCcCCc-cCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCC--CeeecccccC--CCcCcccccCCC--
Q 035786 142 SRLNVLYLSGNSLAG-NVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNL--TRLNLASNFF--TGQIPSGLYSLS-- 214 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~g~~p~~~~~l~-- 214 (693)
++|++|+|++|++++ .+|..|+++++|++|+|++|.+++. .+..+++| +.|++++|.+ ++..|..+..+.
T Consensus 121 ~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~ 197 (562)
T 3a79_B 121 ASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTT 197 (562)
T ss_dssp TTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEE
T ss_pred ccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcc
Confidence 999999999999987 4578899999999999999998753 34444555 7788887777 665555554433
Q ss_pred -------------------------------------------------------------------------------C
Q 035786 215 -------------------------------------------------------------------------------S 215 (693)
Q Consensus 215 -------------------------------------------------------------------------------~ 215 (693)
+
T Consensus 198 ~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~ 277 (562)
T 3a79_B 198 VLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRP 277 (562)
T ss_dssp EEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSS
T ss_pred eEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhccc
Confidence 5
Q ss_pred CCEEEccCCcccccCCccc-----------------------------------------------------cCCCCCCE
Q 035786 216 IQFLNLSDNALTGFIPSEV-----------------------------------------------------GNLDKLIE 242 (693)
Q Consensus 216 L~~L~Ls~N~l~g~~p~~~-----------------------------------------------------~~l~~L~~ 242 (693)
|++|++++|+++|.+|..+ ..+++|++
T Consensus 278 L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~ 357 (562)
T 3a79_B 278 VEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTF 357 (562)
T ss_dssp EEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCE
T ss_pred ccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceE
Confidence 6667777777777666654 66788888
Q ss_pred EEccCCcCcccCchhhhcCcccccccccccccccc--CCCcccCCCCCCCEEEccCCcCCCcCcc-cccCCCCCCEEEcc
Q 035786 243 LDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQ--LSEGLFPTLDQLQVVDLSGNKLDGALPA-TLFLRPNLRFLDLS 319 (693)
Q Consensus 243 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--i~~~~~~~l~~L~~L~Ls~N~l~g~~p~-~l~~~~~L~~L~Ls 319 (693)
|++++|++++.+|..+.++++|++|++++|++++. +| ..|..+++|+.|++++|++++.+|. .+..+++|+.|+++
T Consensus 358 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~ 436 (562)
T 3a79_B 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVA-LMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436 (562)
T ss_dssp EECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHH-HTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECC
T ss_pred EECCCCccccchhhhhcccCCCCEEECCCCCcCCcccch-hhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECC
Confidence 88888888888888888888888888888888752 22 2357788888888888888885554 46677888888888
Q ss_pred CCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCC-cC-----cccccCCCcCCC
Q 035786 320 RNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADD-RG-----RNVSLGRNCLQS 391 (693)
Q Consensus 320 ~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~-~~-----~~~~l~~n~l~g 391 (693)
+|++++.+|... ...|+.|++++|+++ .+|. ..+++|+.|||++|+++ .+|.. +. +.+++++|.+.+
T Consensus 437 ~n~l~~~~~~~l---~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 437 SNMLTGSVFRCL---PPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp SSCCCGGGGSSC---CTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCC
T ss_pred CCCCCcchhhhh---cCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCC
Confidence 888887776422 167888888888887 4554 45678888888888888 56665 32 246677776654
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=295.87 Aligned_cols=161 Identities=22% Similarity=0.234 Sum_probs=135.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
+.|...+.||+|+||+||+|+. .+|+.||||+++.... +.+|++++++++|||||++++++.+ ++..|||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVRE-GPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEE-TTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEecc
Confidence 3466677899999999999996 4699999999975433 2469999999999999999999876 46899999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC-ceEECCccccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF-EVRLGSLSELHAQ 669 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~-~~ki~Dfgla~~~ 669 (693)
++|+|.++|+... .+++.+...|+.||+.||+|||+. +||||||||+||||+.++ .+||+|||+|+.+
T Consensus 133 ~gg~L~~~l~~~~--------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~ 201 (336)
T 4g3f_A 133 EGGSLGQLIKQMG--------CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 201 (336)
T ss_dssp TTCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred CCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence 9999999997642 499999999999999999999998 999999999999999987 6999999999987
Q ss_pred CCCCc----ceeeeeehhhhhhh
Q 035786 670 GDSHQ----NVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~----~~~~~~~~~~~y~a 688 (693)
..... .....++||++|||
T Consensus 202 ~~~~~~~~~~~~~~~~GT~~YmA 224 (336)
T 4g3f_A 202 QPDGLGKSLLTGDYIPGTETHMA 224 (336)
T ss_dssp ------------CCCCCCGGGCC
T ss_pred cCCCcccceecCCccccCccccC
Confidence 43211 11334689999997
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=285.85 Aligned_cols=162 Identities=17% Similarity=0.283 Sum_probs=128.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||+||+|+. .+|+.||||++..... ..+.|.+|++++++++|||||++++++.+ ++..|+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-KDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEEE
Confidence 5688889999999999999996 5699999999975332 24679999999999999999999998865 5789999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+ +|+|.+++... ..+++.+...++.|++.||+|||++ +||||||||+|||+++++.+||+|||+|
T Consensus 92 mEy~-~g~L~~~l~~~--------~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla 159 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR--------DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS 159 (275)
T ss_dssp EECC-CEEHHHHHHHS--------CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC
T ss_pred EeCC-CCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCC
Confidence 9999 68999999753 2489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+...+... .+..+||++|||
T Consensus 160 ~~~~~~~~--~~~~~GT~~Y~A 179 (275)
T 3hyh_A 160 NIMTDGNF--LKTSCGSPNYAA 179 (275)
T ss_dssp -----------------CTTSC
T ss_pred eecCCCCc--cCCeeECcccCC
Confidence 98744332 445789999987
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=319.60 Aligned_cols=310 Identities=23% Similarity=0.233 Sum_probs=231.4
Q ss_pred CCcceeecCCCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcC-chHhhhCCCCccEEEecCCCCC
Q 035786 53 SWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSI-PEWFGYRLPALQVLDLRSCSLS 131 (693)
Q Consensus 53 ~W~gv~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~i-p~~~~~~l~~L~~L~Ls~n~l~ 131 (693)
.|..|.+-..+++.|+|++... ..+.+ ..+.++++|++|++++|.+.+.+ |..|. ++++|++|+|++|.++
T Consensus 15 ~L~~vP~lp~~l~~LdLs~N~i---~~i~~----~~~~~l~~L~~LdLs~n~~~~~i~~~~f~-~L~~L~~L~Ls~N~l~ 86 (844)
T 3j0a_A 15 NLTQVPQVLNTTERLLLSFNYI---RTVTA----SSFPFLEQLQLLELGSQYTPLTIDKEAFR-NLPNLRILDLGSSKIY 86 (844)
T ss_dssp CSSCCCSSCTTCCEEEEESCCC---CEECS----SSCSSCCSCSEEEECTTCCCCEECTTTTS-SCTTCCEEECTTCCCC
T ss_pred CCCCCCCCCCCcCEEECCCCcC---CccCh----hHCcccccCeEEeCCCCCCccccCHHHhc-CCCCCCEEECCCCcCc
Confidence 5777777446788999987542 22322 36889999999999999888888 55565 6999999999999999
Q ss_pred cCCCcccCCCccCCEEecccCcCCccCccc--cCCCCCCCEEEccCCCCCCcCc-hhhhcCcCCCeeecccccCCCcCcc
Q 035786 132 GSIPGSFGNLSRLNVLYLSGNSLAGNVPAT--LGELKKLSNLDLSRNLLTGEIP-NAISLLGNLTRLNLASNFFTGQIPS 208 (693)
Q Consensus 132 g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~ 208 (693)
+..|..|+++++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..| ..++++++|++|+|++|.+++..|.
T Consensus 87 ~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~ 166 (844)
T 3j0a_A 87 FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166 (844)
T ss_dssp EECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSG
T ss_pred ccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHH
Confidence 999999999999999999999999877765 9999999999999999998755 6899999999999999999988888
Q ss_pred cccCC--CCCCEEEccCCcccccCCccccCCCC------CCEEEccCCcCcccCchhhhc--------------------
Q 035786 209 GLYSL--SSIQFLNLSDNALTGFIPSEVGNLDK------LIELDLSKNSISGSLPLELRG-------------------- 260 (693)
Q Consensus 209 ~~~~l--~~L~~L~Ls~N~l~g~~p~~~~~l~~------L~~L~Ls~N~l~g~~p~~~~~-------------------- 260 (693)
.+..+ ++|+.|++++|.+++..|..++.+.+ |+.|++++|.+++.+|..+..
T Consensus 167 ~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~ 246 (844)
T 3j0a_A 167 ELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAG 246 (844)
T ss_dssp GGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCS
T ss_pred HcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccc
Confidence 88776 77888888888887777766665554 777777777666555544332
Q ss_pred ------------------CccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCc
Q 035786 261 ------------------LRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNN 322 (693)
Q Consensus 261 ------------------l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~ 322 (693)
.++|+.|++++|.+.+..+ ..|..+++|+.|+|++|++++..|..+..+++|++|+|++|+
T Consensus 247 ~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~ 325 (844)
T 3j0a_A 247 FGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS-RVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNL 325 (844)
T ss_dssp SSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS-CCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCC
T ss_pred ccccccCCCChhhhhccccCCccEEECCCCcccccCh-hhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCC
Confidence 1456667777776664433 335666677777777777766666666666777777777777
Q ss_pred CcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCccee
Q 035786 323 ITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQG 372 (693)
Q Consensus 323 l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g 372 (693)
+++..| ..+..++.|+.|++++|++.+..+. ..+++|+.|+|++|.+++
T Consensus 326 l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 326 LGELYS-SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp CSCCCS-CSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CCccCH-HHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 665444 3445566666777777666544332 345566666666666654
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-32 Score=309.52 Aligned_cols=284 Identities=23% Similarity=0.210 Sum_probs=171.4
Q ss_pred cccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCC
Q 035786 89 LGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKL 168 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 168 (693)
+.+++.|++|++++|.+.+..|..|+ .+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|
T Consensus 71 ~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L 149 (597)
T 3oja_B 71 LDSFRQVELLNLNDLQIEEIDTYAFA-YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKL 149 (597)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTT-TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HccCCCCcEEECCCCCCCCCChHHhc-CCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCC
Confidence 45566666666666666665555554 36666666666666666666666666666666666666665444445666666
Q ss_pred CEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCC
Q 035786 169 SNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKN 248 (693)
Q Consensus 169 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 248 (693)
++|+|++|.+++..|..+..+++|++|++++|.+++.. +..+++|+.|++++|.+++ +....+|+.|++++|
T Consensus 150 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n 221 (597)
T 3oja_B 150 TTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHN 221 (597)
T ss_dssp CEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSS
T ss_pred CEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCC
Confidence 66666666666666666666666666666666666432 3344555555555555543 122334555555555
Q ss_pred cCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCC
Q 035786 249 SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 249 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p 328 (693)
.++...+. + .++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++ +|
T Consensus 222 ~l~~~~~~-~--~~~L~~L~L~~n~l~~~---~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~ 294 (597)
T 3oja_B 222 SINVVRGP-V--NVELTILKLQHNNLTDT---AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LN 294 (597)
T ss_dssp CCCEEECS-C--CSCCCEEECCSSCCCCC---GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EE
T ss_pred cccccccc-c--CCCCCEEECCCCCCCCC---hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CC
Confidence 55432221 1 24666777777776652 234566777777777777777777777777777777777777765 33
Q ss_pred ccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCCcC--cccccCCCcCC
Q 035786 329 ILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADDRG--RNVSLGRNCLQ 390 (693)
Q Consensus 329 ~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~--~~~~l~~n~l~ 390 (693)
. ....++.|+.|+|++|.+.+ +|. ..+++|+.|+|++|.+++..+..+. ..+++++|.+.
T Consensus 295 ~-~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~~ 358 (597)
T 3oja_B 295 L-YGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWD 358 (597)
T ss_dssp C-SSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEE
T ss_pred c-ccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCCC
Confidence 2 33456667777777777763 332 3456677777777777654322222 24556666543
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-34 Score=294.59 Aligned_cols=163 Identities=20% Similarity=0.229 Sum_probs=133.1
Q ss_pred CCCccCccccCCeeeEEEEEeC----CCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA----GGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~----~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||+||+|+.. .++.||||+++.... ....|.+|+++|++++|||||++++++.+ ++..|+
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~i 103 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT-EGKLYL 103 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE-TTEEEE
T ss_pred ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEE
Confidence 4777889999999999999852 478999999975432 23468899999999999999999998875 578999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|||||++|+|.++|++.. .+++.+...|+.|++.||+|||+. +||||||||+|||+++++.+||+|||+
T Consensus 104 vmEy~~gg~L~~~l~~~~--------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGl 172 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGL 172 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEE
T ss_pred EEEcCCCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccc
Confidence 999999999999997643 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+...+.... .+..+||++|||
T Consensus 173 a~~~~~~~~~-~~~~~GT~~YmA 194 (304)
T 3ubd_A 173 SKESIDHEKK-AYSFCGTVEYMA 194 (304)
T ss_dssp EEC-----CC-CCSCCCCGGGCC
T ss_pred ceeccCCCcc-ccccccCcccCC
Confidence 9976433322 345789999997
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-31 Score=290.36 Aligned_cols=284 Identities=23% Similarity=0.196 Sum_probs=156.4
Q ss_pred ccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCC
Q 035786 90 GNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLS 169 (693)
Q Consensus 90 ~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 169 (693)
.++++|+.|++++|.+.+..|..+. .+++|++|+|++|.+++..|..|+++++|++|+|++|.++...+..|.++++|+
T Consensus 66 ~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 144 (390)
T 3o6n_A 66 DSFRQVELLNLNDLQIEEIDTYAFA-YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 144 (390)
T ss_dssp HHCCCCSEEECTTSCCCEECTTTTT-TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred cccccCcEEECCCCcccccChhhcc-CCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCc
Confidence 3444555555555544443333333 255555555555555544444455555555555555555433222344455555
Q ss_pred EEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCc
Q 035786 170 NLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNS 249 (693)
Q Consensus 170 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 249 (693)
+|+|++|.+++..|..+..+++|++|++++|.+++. .+..+++|+.|++++|.+++ +...++|++|++++|.
T Consensus 145 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~ 216 (390)
T 3o6n_A 145 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNS 216 (390)
T ss_dssp EEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSC
T ss_pred EEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCe
Confidence 555555555444444455555555555555554432 12333444444444444332 1222345556666665
Q ss_pred CcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCc
Q 035786 250 ISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPI 329 (693)
Q Consensus 250 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~ 329 (693)
++.. |.. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..+..+++|+.|+|++|++++ +|.
T Consensus 217 l~~~-~~~--~~~~L~~L~l~~n~l~~~---~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~ 289 (390)
T 3o6n_A 217 INVV-RGP--VNVELTILKLQHNNLTDT---AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNL 289 (390)
T ss_dssp CCEE-ECC--CCSSCCEEECCSSCCCCC---GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EEC
T ss_pred eeec-ccc--ccccccEEECCCCCCccc---HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCc
Confidence 5533 221 235777778888877753 234677788888888888887777777778888888888888775 342
Q ss_pred cCcCCCCCCcEEEccCCccceecCC-CCCCCCCEEEccCCcceeecCCCcC--cccccCCCcCC
Q 035786 330 LSTNGNASGAVFNISNNMLYGDLNS-SSFRKFSLIDLSSNYFQGTVADDRG--RNVSLGRNCLQ 390 (693)
Q Consensus 330 ~~~~~~~~l~~l~ls~N~l~g~~~~-~~~~~l~~ldLs~N~l~g~ip~~~~--~~~~l~~n~l~ 390 (693)
....++.|+.|++++|++.+..+. ..+++|+.|++++|.++..-...+. +.+++++|.+.
T Consensus 290 -~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 290 -YGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp -SSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEE
T ss_pred -ccCCCCCCCEEECCCCcceecCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCcc
Confidence 335567788888888877643222 3456778888888877654222221 24566666543
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.1e-31 Score=308.55 Aligned_cols=302 Identities=25% Similarity=0.260 Sum_probs=231.1
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.+++.++|++... ..+++ ..+.++++|++|++++|.+.+..|..+.. +++|++|+|++|.+++..+..|+++
T Consensus 25 ~~l~~L~Ls~n~l---~~~~~----~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~l~~~~~~~l 96 (680)
T 1ziw_A 25 TNITVLNLTHNQL---RRLPA----ANFTRYSQLTSLDVGFNTISKLEPELCQK-LPMLKVLNLQHNELSQLSDKTFAFC 96 (680)
T ss_dssp TTCSEEECCSSCC---CCCCG----GGGGGGTTCSEEECCSSCCCCCCTTHHHH-CTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCcEEECCCCCC---CCcCH----HHHhCCCcCcEEECCCCccCccCHHHHhc-ccCcCEEECCCCccCccChhhhccC
Confidence 3678888887542 22332 35788999999999999999888888875 9999999999999997666689999
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCccccc--CCCCCCEE
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLY--SLSSIQFL 219 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L 219 (693)
++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..+..+++|++|++++|.+++..|..+. .+++|+.|
T Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 176 (680)
T 1ziw_A 97 TNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKL 176 (680)
T ss_dssp TTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEE
T ss_pred CCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEE
Confidence 9999999999999887778899999999999999999988888899999999999999999887776554 56889999
Q ss_pred EccCCcccccCCccccCC---------------------------CCCCEEEccCCcCcccCchhhhcCcc--ccccccc
Q 035786 220 NLSDNALTGFIPSEVGNL---------------------------DKLIELDLSKNSISGSLPLELRGLRN--LAKLVIS 270 (693)
Q Consensus 220 ~Ls~N~l~g~~p~~~~~l---------------------------~~L~~L~Ls~N~l~g~~p~~~~~l~~--L~~L~Ls 270 (693)
++++|++++..|..+..+ ++|+.|++++|.+++..|..+.+++. |++|+++
T Consensus 177 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls 256 (680)
T 1ziw_A 177 ELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLS 256 (680)
T ss_dssp ECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECT
T ss_pred ECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECC
Confidence 999999988888766544 45677777788888777777877755 8888888
Q ss_pred cccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCccc-----CCc---cCcCCCCCCcEEE
Q 035786 271 ENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS-----WPI---LSTNGNASGAVFN 342 (693)
Q Consensus 271 ~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~-----~p~---~~~~~~~~l~~l~ 342 (693)
+|.+++..+. .|..+++|+.|++++|++++..|..+..+++|+.|++++|...+. +|. ..+..+..|+.|+
T Consensus 257 ~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~ 335 (680)
T 1ziw_A 257 YNNLNVVGND-SFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLN 335 (680)
T ss_dssp TSCCCEECTT-TTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEE
T ss_pred CCCcCccCcc-cccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEE
Confidence 8888765544 357788888888888888887777777777777777776655442 221 2344556677777
Q ss_pred ccCCccceecCC--CCCCCCCEEEccCCccee
Q 035786 343 ISNNMLYGDLNS--SSFRKFSLIDLSSNYFQG 372 (693)
Q Consensus 343 ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g 372 (693)
+++|.+.+..+. ..+++|+.|++++|.+++
T Consensus 336 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 336 MEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred CCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 777776665443 344556666666655443
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.1e-31 Score=303.19 Aligned_cols=156 Identities=26% Similarity=0.278 Sum_probs=118.6
Q ss_pred cCCCCCCEEEccCCcCcccC--chhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCc-ccccCCC
Q 035786 235 GNLDKLIELDLSKNSISGSL--PLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALP-ATLFLRP 311 (693)
Q Consensus 235 ~~l~~L~~L~Ls~N~l~g~~--p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p-~~l~~~~ 311 (693)
..+++|++|++++|.+++.. |..+.++++|++|++++|.+++..+ . +..+++|+.|++++|.+++..| ..+..++
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 421 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-N-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLR 421 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-E-EETCTTCCEEECTTSEEESCTTSCTTTTCT
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-c-ccccCCCCEEEccCCccccccchhhhhcCC
Confidence 35677888888888888654 7788888888888888888875433 3 5778888888888888887666 4677788
Q ss_pred CCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccc-eecCC--CCCCCCCEEEccCCcceeecCCCcC-----cccc
Q 035786 312 NLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLY-GDLNS--SSFRKFSLIDLSSNYFQGTVADDRG-----RNVS 383 (693)
Q Consensus 312 ~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~-g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~-----~~~~ 383 (693)
+|++|++++|++++..|. .+..+++|+.|++++|.+. +.+|. ..+++|+.||+++|.+++..|..+. +.++
T Consensus 422 ~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 500 (570)
T 2z63_A 422 NLIYLDISHTHTRVAFNG-IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500 (570)
T ss_dssp TCCEEECTTSCCEECCTT-TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCEEeCcCCcccccchh-hhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEe
Confidence 888888888888877663 5567788888888888887 56664 5667888888888888887776654 3567
Q ss_pred cCCCcCCCCc
Q 035786 384 LGRNCLQSVA 393 (693)
Q Consensus 384 l~~n~l~g~~ 393 (693)
+++|.+++.+
T Consensus 501 l~~n~l~~~~ 510 (570)
T 2z63_A 501 MASNQLKSVP 510 (570)
T ss_dssp CCSSCCSCCC
T ss_pred CCCCcCCCCC
Confidence 7788777654
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.7e-31 Score=302.79 Aligned_cols=297 Identities=21% Similarity=0.231 Sum_probs=249.1
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+..|..|. .+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFS-NFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTT-TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCEeChhhcc-CCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 6899999999999988777776 499999999999999998899999999999999999999998899999999999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCC-cCcccccCCCCCCEEEccCCcccccCCccccCCC-------------
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTG-QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLD------------- 238 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~------------- 238 (693)
|++|.+++..|..++.+++|++|++++|.+++ .+|..++++++|++|++++|++++..|..++.++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 99999998877889999999999999999986 6799999999999999999999876665443322
Q ss_pred --------------------------------------------------------------------------------
Q 035786 239 -------------------------------------------------------------------------------- 238 (693)
Q Consensus 239 -------------------------------------------------------------------------------- 238 (693)
T Consensus 191 n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 191 NPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence
Q ss_pred -------------------------------------CCCEEEccCCcCcccCc--------------------hhhhcC
Q 035786 239 -------------------------------------KLIELDLSKNSISGSLP--------------------LELRGL 261 (693)
Q Consensus 239 -------------------------------------~L~~L~Ls~N~l~g~~p--------------------~~~~~l 261 (693)
+|++|++++|.+ +.+| ..+..+
T Consensus 271 ~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l 349 (606)
T 3vq2_A 271 TNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVAL 349 (606)
T ss_dssp CTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCC
T ss_pred cccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccC
Confidence 223333333333 1222 123356
Q ss_pred ccccccccccccccccC--CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCc
Q 035786 262 RNLAKLVISENGLEGQL--SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGA 339 (693)
Q Consensus 262 ~~L~~L~Ls~N~l~g~i--~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~ 339 (693)
++|++|++++|.+++.. +.. +..+++|+.|++++|.+++ +|..+..+++|+.|++++|++++..|...+..+++|+
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~-~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 427 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYS-DLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLL 427 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHH-HHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCC
T ss_pred CCCCEEECcCCccCCCcchhhh-hccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCC
Confidence 77888888889988652 443 5788999999999999986 6688999999999999999999888755678899999
Q ss_pred EEEccCCccceecCC--CCCCCCCEEEccCCcceee-cCCCcC-----cccccCCCcCCCCc
Q 035786 340 VFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGT-VADDRG-----RNVSLGRNCLQSVA 393 (693)
Q Consensus 340 ~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~-ip~~~~-----~~~~l~~n~l~g~~ 393 (693)
.|++++|.+.+.+|. ..+++|+.|++++|.+++. +|..+. +.+++++|.+.+.+
T Consensus 428 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 489 (606)
T 3vq2_A 428 YLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQIS 489 (606)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC
T ss_pred EEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccC
Confidence 999999999998876 5788999999999999994 676654 36789999887754
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=304.03 Aligned_cols=206 Identities=19% Similarity=0.173 Sum_probs=167.9
Q ss_pred eecCCCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcc
Q 035786 58 QCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGS 137 (693)
Q Consensus 58 ~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~ 137 (693)
.|....| .++++... ..+|+. + .+.|+.|++++|.+.+..|..+. .+++|++|+|++|.+++..|..
T Consensus 3 ~C~~~~~--c~~~~~~l---~~ip~~-----~--~~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~n~i~~~~~~~ 69 (549)
T 2z81_A 3 SCDASGV--CDGRSRSF---TSIPSG-----L--TAAMKSLDLSFNKITYIGHGDLR-ACANLQVLILKSSRINTIEGDA 69 (549)
T ss_dssp EECTTSE--EECTTSCC---SSCCSC-----C--CTTCCEEECCSSCCCEECSSTTS-SCTTCCEEECTTSCCCEECTTT
T ss_pred cCCCCce--EECCCCcc---cccccc-----C--CCCccEEECcCCccCccChhhhh-cCCcccEEECCCCCcCccChhh
Confidence 5765555 56665432 344442 2 26899999999999988888886 5999999999999999999999
Q ss_pred cCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCC-cCchhhhcCcCCCeeecccccCCCcCc-ccccCCCC
Q 035786 138 FGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG-EIPNAISLLGNLTRLNLASNFFTGQIP-SGLYSLSS 215 (693)
Q Consensus 138 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~ 215 (693)
|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++ .+|..+..+++|++|++++|.+.+.+| ..+..+++
T Consensus 70 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~ 149 (549)
T 2z81_A 70 FYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTS 149 (549)
T ss_dssp TTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCE
T ss_pred ccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccc
Confidence 9999999999999999998888889999999999999999987 467889999999999999999666665 68999999
Q ss_pred CCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 216 IQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 216 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
|++|++++|++++.+|..++.+++|++|+++.|.+....+..+..+++|++|++++|++++
T Consensus 150 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 150 LNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp EEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTT
T ss_pred cCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccc
Confidence 9999999999999999999887777777777776653222223456666666666666654
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-30 Score=271.44 Aligned_cols=267 Identities=23% Similarity=0.277 Sum_probs=224.2
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+..+..+. .+++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|..+. ++|++|+
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~ 127 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFK-NLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELR 127 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTT-TCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEE
T ss_pred CCCeEEECCCCcCCEeChhhhc-cCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEE
Confidence 4789999999999876666776 5999999999999999988999999999999999999998 5666654 7999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCC--cCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcC
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTG--QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 250 (693)
+++|.+++..+..+..+++|+.|++++|.++. ..+..+..+++|+.|++++|+++. +|..+. ++|++|++++|.+
T Consensus 128 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 128 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp CCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCC
T ss_pred CCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcC
Confidence 99999998888889999999999999999963 678889999999999999999985 666554 7999999999999
Q ss_pred cccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCcc
Q 035786 251 SGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPIL 330 (693)
Q Consensus 251 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~ 330 (693)
++..|..+.++++|++|++++|.+++..+. .+..+++|+.|++++|+++ .+|.++..+++|++|++++|+|++..+ .
T Consensus 205 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~-~ 281 (330)
T 1xku_A 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNG-SLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGS-N 281 (330)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTT-TGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCT-T
T ss_pred CccCHHHhcCCCCCCEEECCCCcCceeChh-hccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccCh-h
Confidence 999899999999999999999999875554 4578999999999999999 788889999999999999999986444 3
Q ss_pred CcC------CCCCCcEEEccCCccce-ecCC---CCCCCCCEEEccCCc
Q 035786 331 STN------GNASGAVFNISNNMLYG-DLNS---SSFRKFSLIDLSSNY 369 (693)
Q Consensus 331 ~~~------~~~~l~~l~ls~N~l~g-~~~~---~~~~~l~~ldLs~N~ 369 (693)
.+. ....+..+++++|.+.. .++. ..+..++.++|++|+
T Consensus 282 ~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 282 DFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred hcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 332 23567888999988752 2322 456678888888874
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=274.23 Aligned_cols=266 Identities=24% Similarity=0.251 Sum_probs=215.3
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+..|..+. .+++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|..+. ++|++|+
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~ 129 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFK-GLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELR 129 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTT-TCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEE
T ss_pred CCCeEEECCCCcCCccCHhHhh-CCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEE
Confidence 5788999999998876676776 4999999999999999888999999999999999999998 5666555 7899999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCC--CcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcC
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFT--GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 250 (693)
+++|.+++..+..+..+++|+.|++++|.++ +..|..+..+ +|+.|++++|++++ +|..+. ++|++|++++|.+
T Consensus 130 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i 205 (332)
T 2ft3_A 130 IHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKI 205 (332)
T ss_dssp CCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCC
T ss_pred CCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcC
Confidence 9999999777777899999999999999986 4667778877 99999999999986 666554 7899999999999
Q ss_pred cccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCcc
Q 035786 251 SGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPIL 330 (693)
Q Consensus 251 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~ 330 (693)
++..|..+.++++|++|++++|++++..+ ..|..+++|+.|++++|+++ .+|..+..+++|+.|++++|+|++..+.
T Consensus 206 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~- 282 (332)
T 2ft3_A 206 QAIELEDLLRYSKLYRLGLGHNQIRMIEN-GSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVN- 282 (332)
T ss_dssp CCCCTTSSTTCTTCSCCBCCSSCCCCCCT-TGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTT-
T ss_pred CccCHHHhcCCCCCCEEECCCCcCCcCCh-hHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChh-
Confidence 98888889999999999999999986544 34678899999999999998 7788888999999999999999854443
Q ss_pred CcCC------CCCCcEEEccCCccc--eecCC--CCCCCCCEEEccCCc
Q 035786 331 STNG------NASGAVFNISNNMLY--GDLNS--SSFRKFSLIDLSSNY 369 (693)
Q Consensus 331 ~~~~------~~~l~~l~ls~N~l~--g~~~~--~~~~~l~~ldLs~N~ 369 (693)
.+.. ...++.+++++|.+. +..|. ..+++|+.+++++|.
T Consensus 283 ~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 283 DFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred HccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 2222 356778888888876 22222 456678888888774
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-30 Score=292.45 Aligned_cols=320 Identities=22% Similarity=0.204 Sum_probs=249.0
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.+++.|+|++.... .+++ ..+.++++|++|++++|.+.+..|..|. .+++|++|+|++|.+++..|..|+++
T Consensus 28 ~~l~~L~Ls~n~l~---~~~~----~~~~~l~~L~~L~Ls~n~i~~i~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (570)
T 2z63_A 28 FSTKNLDLSFNPLR---HLGS----YSFFSFPELQVLDLSRCEIQTIEDGAYQ-SLSHLSTLILTGNPIQSLALGAFSGL 99 (570)
T ss_dssp SSCCEEECCSCCCC---EECT----TTTTTCSSCCEEECTTCCCCEECTTTTT-TCTTCCEEECTTCCCCEECTTTTTTC
T ss_pred ccccEEEccCCccC---ccCh----hHhhCCCCceEEECCCCcCCccCccccc-CchhCCEEeCcCCcCCccCHhhhcCc
Confidence 35788888875432 2222 3678899999999999999876666676 59999999999999999888999999
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCC-cCchhhhcCcCCCeeecccccCCCcCcccccCCCCC----
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG-EIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSI---- 216 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L---- 216 (693)
++|++|+|++|.+++..+..++++++|++|++++|.+++ .+|..++++++|++|++++|.+++..|..+..+++|
T Consensus 100 ~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~ 179 (570)
T 2z63_A 100 SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 179 (570)
T ss_dssp TTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCC
T ss_pred cccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhh
Confidence 999999999999997766679999999999999999987 579999999999999999999877655555544444
Q ss_pred CEEEccCCccccc-------------------------------------------------------------------
Q 035786 217 QFLNLSDNALTGF------------------------------------------------------------------- 229 (693)
Q Consensus 217 ~~L~Ls~N~l~g~------------------------------------------------------------------- 229 (693)
+.|++++|.+++.
T Consensus 180 ~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l 259 (570)
T 2z63_A 180 LSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTI 259 (570)
T ss_dssp CEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEE
T ss_pred hhcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccch
Confidence 4445544443332
Q ss_pred -------------------------------------CCccccCCCCCCEEEccCCcCcccCchh-h-------------
Q 035786 230 -------------------------------------IPSEVGNLDKLIELDLSKNSISGSLPLE-L------------- 258 (693)
Q Consensus 230 -------------------------------------~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~------------- 258 (693)
+|..+..+ +|++|++++|.++ .+|.. +
T Consensus 260 ~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~-~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~ 337 (570)
T 2z63_A 260 EEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNF-GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKG 337 (570)
T ss_dssp EEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCC-CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBS
T ss_pred hhhhhhcchhhhhhchhhhcCcCcccEEEecCccchhhhhhhccC-CccEEeeccCccc-ccCcccccccCEEeCcCCcc
Confidence 33333333 3334444444333 11111 0
Q ss_pred ------hcCccccccccccccccccC--CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCcc
Q 035786 259 ------RGLRNLAKLVISENGLEGQL--SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPIL 330 (693)
Q Consensus 259 ------~~l~~L~~L~Ls~N~l~g~i--~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~ 330 (693)
..+++|++|++++|.+++.. +. .+..+++|+.|++++|.+++..+. +..+++|+.|++++|++++..|..
T Consensus 338 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~-~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~ 415 (570)
T 2z63_A 338 GNAFSEVDLPSLEFLDLSRNGLSFKGCCSQ-SDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFS 415 (570)
T ss_dssp CCBCCCCBCTTCCEEECCSSCCBEEEEEEH-HHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSC
T ss_pred ccccccccCCCCCEEeCcCCccCccccccc-cccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchh
Confidence 46788999999999987643 33 346789999999999999976555 889999999999999999887766
Q ss_pred CcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcce-eecCCCcC-----cccccCCCcCCCCc
Q 035786 331 STNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQ-GTVADDRG-----RNVSLGRNCLQSVA 393 (693)
Q Consensus 331 ~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~-g~ip~~~~-----~~~~l~~n~l~g~~ 393 (693)
.+..+++|+.|++++|.+.+.+|. ..+++|+.|++++|.++ +.+|..+. +.+++++|.+.+..
T Consensus 416 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 486 (570)
T 2z63_A 416 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLS 486 (570)
T ss_dssp TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC
T ss_pred hhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCC
Confidence 678889999999999999988775 56889999999999998 68887665 36788999887653
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-30 Score=298.91 Aligned_cols=296 Identities=22% Similarity=0.225 Sum_probs=249.5
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.+++|++++|.+.+..|..|.. +++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTR-YSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGG-GTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhC-CCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 67999999999999877777764 99999999999999999999999999999999999999976666899999999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCcccc--CCCCCCEEEccCCcC
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG--NLDKLIELDLSKNSI 250 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L~Ls~N~l 250 (693)
|++|.+++..|..+..+++|++|++++|.+++..|..+..+++|++|++++|++++..|..+. .+++|++|++++|.+
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999988788999999999999999999999999999999999999999999988777654 568999999999999
Q ss_pred cccCchhhhcCc---------------------------cccccccccccccccCCCcccCCCC--CCCEEEccCCcCCC
Q 035786 251 SGSLPLELRGLR---------------------------NLAKLVISENGLEGQLSEGLFPTLD--QLQVVDLSGNKLDG 301 (693)
Q Consensus 251 ~g~~p~~~~~l~---------------------------~L~~L~Ls~N~l~g~i~~~~~~~l~--~L~~L~Ls~N~l~g 301 (693)
++..|..+..++ +|+.|++++|.+++..|.. |..++ +|+.|++++|++++
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~-~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT-FLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT-TGGGGGSCCCEEECTTSCCCE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhH-hhccCcCCCCEEECCCCCcCc
Confidence 998888777654 4566777777777655544 45554 49999999999998
Q ss_pred cCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceec-----CC------CCCCCCCEEEccCCcc
Q 035786 302 ALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDL-----NS------SSFRKFSLIDLSSNYF 370 (693)
Q Consensus 302 ~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~-----~~------~~~~~l~~ldLs~N~l 370 (693)
..|..+..+++|++|++++|++++..|. .+..+.+|+.|++++|...+.+ |. ..+++|+.|++++|.+
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l 341 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSH-SLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDI 341 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTT-TTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCB
T ss_pred cCcccccCcccccEeeCCCCccCccChh-hhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCcc
Confidence 8888888999999999999999887773 5677888999999988766533 21 4567899999999999
Q ss_pred eeecCCCcC-----cccccCCCcCCC
Q 035786 371 QGTVADDRG-----RNVSLGRNCLQS 391 (693)
Q Consensus 371 ~g~ip~~~~-----~~~~l~~n~l~g 391 (693)
++..|..+. +.+++++|.+.+
T Consensus 342 ~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 342 PGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred CCCChhHhccccCCcEEECCCCchhh
Confidence 987766543 356677776544
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-30 Score=292.97 Aligned_cols=318 Identities=26% Similarity=0.282 Sum_probs=234.9
Q ss_pred CEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCc
Q 035786 63 QVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLS 142 (693)
Q Consensus 63 ~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~ 142 (693)
.++.|+|++... ..+++ ..+.++++|++|++++|.+.+-.|..|. .+++|++|+|++|++++..+..|.+++
T Consensus 53 ~~~~LdLs~N~i---~~l~~----~~f~~l~~L~~L~Ls~N~i~~i~~~~f~-~L~~L~~L~Ls~N~l~~l~~~~f~~L~ 124 (635)
T 4g8a_A 53 STKNLDLSFNPL---RHLGS----YSFFSFPELQVLDLSRCEIQTIEDGAYQ-SLSHLSTLILTGNPIQSLALGAFSGLS 124 (635)
T ss_dssp TCCEEECTTSCC---CEECT----TTTTTCTTCCEEECTTCCCCEECTTTTT-TCTTCCEEECTTCCCCEECGGGGTTCT
T ss_pred CCCEEEeeCCCC---CCCCH----HHHhCCCCCCEEECCCCcCCCcChhHhc-CCCCCCEEEccCCcCCCCCHHHhcCCC
Confidence 467888887542 23433 3678999999999999999865555665 599999999999999988778899999
Q ss_pred cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCC-cCchhhhcCcCCCeeecccccCCCcCcccccCC--------
Q 035786 143 RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG-EIPNAISLLGNLTRLNLASNFFTGQIPSGLYSL-------- 213 (693)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l-------- 213 (693)
+|++|+|++|++++..+..|+++++|++|+|++|.+++ .+|..+..+++|++|++++|++++..|..+..+
T Consensus 125 ~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~ 204 (635)
T 4g8a_A 125 SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 204 (635)
T ss_dssp TCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCC
T ss_pred CCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhh
Confidence 99999999999998777789999999999999999976 468889999999999999998765444322111
Q ss_pred --------------------------------------------------------------------------------
Q 035786 214 -------------------------------------------------------------------------------- 213 (693)
Q Consensus 214 -------------------------------------------------------------------------------- 213 (693)
T Consensus 205 ~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 284 (635)
T 4g8a_A 205 SLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 284 (635)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEE
T ss_pred hhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhh
Confidence
Q ss_pred -------------------------------------------CCCCEEEccCCcccccCCc------------------
Q 035786 214 -------------------------------------------SSIQFLNLSDNALTGFIPS------------------ 232 (693)
Q Consensus 214 -------------------------------------------~~L~~L~Ls~N~l~g~~p~------------------ 232 (693)
.+|+.|++.+|.+.+..+.
T Consensus 285 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~ 364 (635)
T 4g8a_A 285 EFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNA 364 (635)
T ss_dssp EEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCB
T ss_pred hhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCC
Confidence 1223333333333221111
Q ss_pred -cccCCCCCCEEEccCCcCcc-------------------------------------------------c-CchhhhcC
Q 035786 233 -EVGNLDKLIELDLSKNSISG-------------------------------------------------S-LPLELRGL 261 (693)
Q Consensus 233 -~~~~l~~L~~L~Ls~N~l~g-------------------------------------------------~-~p~~~~~l 261 (693)
....+++|+.|++++|.+.. . .+..+..+
T Consensus 365 ~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l 444 (635)
T 4g8a_A 365 FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL 444 (635)
T ss_dssp CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTC
T ss_pred cccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccc
Confidence 11234556666666655431 1 11234566
Q ss_pred ccccccccccccccccCCCcccCCCCCCCEEEccCCcC-CCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcE
Q 035786 262 RNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL-DGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAV 340 (693)
Q Consensus 262 ~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l-~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~ 340 (693)
++++.++++.|.+.+..+ ..+..++.|+.|++++|++ .+.+|..+..+++|++|+|++|+|++..| ..+..+++|+.
T Consensus 445 ~~l~~l~ls~n~l~~~~~-~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~-~~f~~l~~L~~ 522 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFN-GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP-TAFNSLSSLQV 522 (635)
T ss_dssp TTCCEEECTTSCCEECCT-TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCE
T ss_pred cccccccccccccccccc-cccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcCh-HHHcCCCCCCE
Confidence 677788888888886555 4467888999999999975 45678888889999999999999998777 45678889999
Q ss_pred EEccCCccceecCC--CCCCCCCEEEccCCcceeecCCCcC------cccccCCCcCC
Q 035786 341 FNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADDRG------RNVSLGRNCLQ 390 (693)
Q Consensus 341 l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~~~------~~~~l~~n~l~ 390 (693)
|+|++|++++..|. ..+++|+.|||++|++++..|..+. +.+++++|-+.
T Consensus 523 L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 523 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp EECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred EECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 99999999886654 5678899999999999998887653 24567777553
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=287.34 Aligned_cols=165 Identities=20% Similarity=0.327 Sum_probs=139.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC-----CCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH-----ETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~ 582 (693)
++|...+.||+|+||+||+|+. .+|+.||||++...... .+.+.+|+++|++++|||||++++++... ...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 3577788999999999999986 57999999999754332 45788999999999999999999987432 246
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.|||||||+ |+|.+++... ..+++.+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~--------~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~D 201 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS--------QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGD 201 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECC
T ss_pred EEEEEeCCC-CCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEee
Confidence 799999996 7899999753 3599999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCC---Ccceeeeeehhhhhhh
Q 035786 663 LSELHAQGDS---HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~---~~~~~~~~~~~~~y~a 688 (693)
||+|+.+... .....+.++||++|||
T Consensus 202 FGla~~~~~~~~~~~~~~~~~~GT~~Y~A 230 (398)
T 4b99_A 202 FGMARGLCTSPAEHQYFMTEYVATRWYRA 230 (398)
T ss_dssp CTTCBCC-------CCCCCSSCCCCTTCC
T ss_pred cceeeecccCccccccccccceeChHhcC
Confidence 9999987332 2333556899999997
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-31 Score=280.29 Aligned_cols=259 Identities=19% Similarity=0.110 Sum_probs=201.6
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+..+..+. .+++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..+.++++|++|+
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQ-RCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTT-TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE
T ss_pred ccCcEEECCCCcCcccCHHHhc-cCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE
Confidence 4788899999988865554665 489999999999999888888899999999999999999866555688899999999
Q ss_pred ccCCCCCCcCc-hhhhcCcCCCeeeccccc-CCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcC
Q 035786 173 LSRNLLTGEIP-NAISLLGNLTRLNLASNF-FTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250 (693)
Q Consensus 173 Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 250 (693)
|++|.+++..+ ..+..+++|++|++++|. +++..|..+..+++|+.|++++|++++..|..++.+++|++|++++|.+
T Consensus 131 L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 131 LLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred CCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 99998884333 378888999999999884 6665677888889999999999999888888899999999999999988
Q ss_pred cccCchhhhcCccccccccccccccccCCCcc--cCCCCCCCEEEccCCcCCC----cCcccccCCCCCCEEEccCCcCc
Q 035786 251 SGSLPLELRGLRNLAKLVISENGLEGQLSEGL--FPTLDQLQVVDLSGNKLDG----ALPATLFLRPNLRFLDLSRNNIT 324 (693)
Q Consensus 251 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~--~~~l~~L~~L~Ls~N~l~g----~~p~~l~~~~~L~~L~Ls~N~l~ 324 (693)
+...+..+..+++|++|++++|.+++..+..+ ......++.+++++|.+++ .+|.++..+++|+.|+|++|+++
T Consensus 211 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 211 ILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK 290 (353)
T ss_dssp TTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC
T ss_pred ccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC
Confidence 75444455668889999999998886443322 1235667888888888876 46777888888888888888888
Q ss_pred ccCCccCcCCCCCCcEEEccCCccceecC
Q 035786 325 GSWPILSTNGNASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 325 g~~p~~~~~~~~~l~~l~ls~N~l~g~~~ 353 (693)
.+|...+..+++|+.|++++|++.|++|
T Consensus 291 -~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 291 -SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp -CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred -ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 6665445566667777777776666554
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-29 Score=277.61 Aligned_cols=292 Identities=21% Similarity=0.186 Sum_probs=202.4
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.+++.+++++.... .+ | .+..+++|++|++++|.+.+ +| ++ .+++|++|+|++|.+++. | ++++
T Consensus 42 ~~L~~L~Ls~n~l~---~~-~-----~l~~l~~L~~L~Ls~n~l~~-~~--~~-~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 42 ATLTSLDCHNSSIT---DM-T-----GIEKLTGLTKLICTSNNITT-LD--LS-QNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp TTCCEEECCSSCCC---CC-T-----TGGGCTTCSEEECCSSCCSC-CC--CT-TCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred CCCCEEEccCCCcc---cC-h-----hhcccCCCCEEEccCCcCCe-Ec--cc-cCCCCCEEECcCCCCcee-e--cCCC
Confidence 46777888764322 12 1 46778888888888888776 34 44 488888888888888764 3 7888
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEc
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNL 221 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 221 (693)
++|++|+|++|++++ +| ++.+++|++|++++|.+++. | ++.+++|++|++++|...+.+ .+..+++|+.|++
T Consensus 106 ~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDC 177 (457)
T ss_dssp TTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEEC
Confidence 888888888888876 34 77888888888888888863 3 677788888888888666665 3677788888888
Q ss_pred cCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCC
Q 035786 222 SDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG 301 (693)
Q Consensus 222 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g 301 (693)
++|++++ +| ++.+++|+.|++++|++++. .++.+++|++|++++|++++ +| +..+++|+.|++++|++++
T Consensus 178 s~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip---~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 178 SFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID---VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSC
T ss_pred CCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC---ccccCCCCEEEeeCCcCCC
Confidence 8888876 44 77778888888888888764 37777888888888888876 55 4667788888888888877
Q ss_pred cCcccccCCC-------CCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC----------CCCCCCCEEE
Q 035786 302 ALPATLFLRP-------NLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS----------SSFRKFSLID 364 (693)
Q Consensus 302 ~~p~~l~~~~-------~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~----------~~~~~l~~ld 364 (693)
..+..+..+. +|+.|++++|++.|.+|. ..+..|+.|++++|.+.|.+|. ...++|+.|+
T Consensus 248 ~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~---~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~ 324 (457)
T 3bz5_A 248 LDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQA---EGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLY 324 (457)
T ss_dssp CCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEEC---TTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred cCHHHCCCCCEEeccCCCCCEEECCCCccCCcccc---cccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEE
Confidence 6554444433 455666666666666652 4456677777777776666553 2234566777
Q ss_pred ccCCcceeecCCCc-C--cccccCCCcCCC
Q 035786 365 LSSNYFQGTVADDR-G--RNVSLGRNCLQS 391 (693)
Q Consensus 365 Ls~N~l~g~ip~~~-~--~~~~l~~n~l~g 391 (693)
+++|+|+| ++-.- . +.+++++|.+++
T Consensus 325 L~~N~l~~-l~l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 325 LNNTELTE-LDVSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp CTTCCCSC-CCCTTCTTCSEEECCSSCCCB
T ss_pred CCCCcccc-cccccCCcCcEEECCCCCCCC
Confidence 77777776 33111 0 245666666665
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=279.43 Aligned_cols=277 Identities=22% Similarity=0.171 Sum_probs=237.1
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 167 (693)
.+.++++|++|++++|.+.+ +| .+.. +++|++|+|++|.+++. | ++++++|++|+|++|.+++. | ++++++
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~-~~-~l~~-l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~ 107 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITD-MT-GIEK-LTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTK 107 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCC-CT-TGGG-CTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTT
T ss_pred ChhHcCCCCEEEccCCCccc-Ch-hhcc-cCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCc
Confidence 57788999999999999987 46 5654 99999999999999985 4 89999999999999999975 4 899999
Q ss_pred CCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 035786 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK 247 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 247 (693)
|++|++++|.+++ +| ++.+++|++|++++|.+++. | ++.+++|++|++++|+..+.+ .++.+++|++|++++
T Consensus 108 L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~ 179 (457)
T 3bz5_A 108 LTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSF 179 (457)
T ss_dssp CCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCC
Confidence 9999999999997 45 88999999999999999974 3 889999999999999777776 488999999999999
Q ss_pred CcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccC
Q 035786 248 NSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSW 327 (693)
Q Consensus 248 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~ 327 (693)
|++++ +| +..+++|+.|++++|++++. + +..+++|+.|++++|++++ +| +..+++|+.|++++|++++..
T Consensus 180 n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~---l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 180 NKITE-LD--VSQNKLLNRLNCDTNNITKL-D---LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp SCCCC-CC--CTTCTTCCEEECCSSCCSCC-C---CTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC
T ss_pred Cccce-ec--cccCCCCCEEECcCCcCCee-c---cccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC
Confidence 99997 45 88999999999999999874 2 5789999999999999998 56 788999999999999999754
Q ss_pred CccCcCCCC-------CCcEEEccCCccceecCCCCCCCCCEEEccCCcceeecCCCcC-------------cccccCCC
Q 035786 328 PILSTNGNA-------SGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRG-------------RNVSLGRN 387 (693)
Q Consensus 328 p~~~~~~~~-------~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g~ip~~~~-------------~~~~l~~n 387 (693)
+ ..+..+. .++.+++++|.+.|.+|...+++|+.||+++|.+.|.+|.... ..+++++|
T Consensus 250 ~-~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N 328 (457)
T 3bz5_A 250 V-STLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNT 328 (457)
T ss_dssp C-TTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTC
T ss_pred H-HHCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCC
Confidence 3 3333332 5667788888888999988889999999999999999886432 23456666
Q ss_pred cCCCC
Q 035786 388 CLQSV 392 (693)
Q Consensus 388 ~l~g~ 392 (693)
.+++.
T Consensus 329 ~l~~l 333 (457)
T 3bz5_A 329 ELTEL 333 (457)
T ss_dssp CCSCC
T ss_pred ccccc
Confidence 66663
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-29 Score=266.46 Aligned_cols=264 Identities=24% Similarity=0.310 Sum_probs=229.3
Q ss_pred CCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEc
Q 035786 94 LLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDL 173 (693)
Q Consensus 94 ~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 173 (693)
+|+.++++++.+. .+|..+ .++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI---SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC---CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCC---CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 5677788877765 677654 478999999999999888889999999999999999999988999999999999999
Q ss_pred cCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCccc--ccCCccccCCCCCCEEEccCCcCc
Q 035786 174 SRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT--GFIPSEVGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 174 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~ 251 (693)
++|.++ .+|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.++ +..|..+..+ +|++|++++|+++
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 999998 6676654 89999999999999777777999999999999999996 4778888888 9999999999998
Q ss_pred ccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccC
Q 035786 252 GSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILS 331 (693)
Q Consensus 252 g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~ 331 (693)
+ +|..+. ++|++|++++|.+++..+. .|..+++|+.|++++|++++..|..+..+++|+.|+|++|+++ .+|. .
T Consensus 186 ~-l~~~~~--~~L~~L~l~~n~i~~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~-~ 259 (332)
T 2ft3_A 186 G-IPKDLP--ETLNELHLDHNKIQAIELE-DLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA-G 259 (332)
T ss_dssp S-CCSSSC--SSCSCCBCCSSCCCCCCTT-SSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT-T
T ss_pred c-cCcccc--CCCCEEECCCCcCCccCHH-HhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh-h
Confidence 6 565544 7999999999999865544 4688999999999999999998889999999999999999999 7885 3
Q ss_pred cCCCCCCcEEEccCCccceecCC--------CCCCCCCEEEccCCcce
Q 035786 332 TNGNASGAVFNISNNMLYGDLNS--------SSFRKFSLIDLSSNYFQ 371 (693)
Q Consensus 332 ~~~~~~l~~l~ls~N~l~g~~~~--------~~~~~l~~ldLs~N~l~ 371 (693)
+..++.|+.|++++|++++..+. .....++.+++++|.+.
T Consensus 260 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 260 LPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp GGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred hhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 67789999999999999865432 11456889999999986
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=269.93 Aligned_cols=257 Identities=24% Similarity=0.209 Sum_probs=128.2
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCc--cCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAG--NVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+|++|+|++|.++...+..|+++++|++|+|++|.++. ..|..+..+++|++|+|++|.++ .+|..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 34444444444443222234444444444444444441 12333444445555555555444 2344444445555555
Q ss_pred cccccCCCcCc-ccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc-cCchhhhcCccccccccccccc
Q 035786 197 LASNFFTGQIP-SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG-SLPLELRGLRNLAKLVISENGL 274 (693)
Q Consensus 197 Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l 274 (693)
+++|.+++..+ ..+..+++|++|++++|.+++..|..+..+++|++|++++|.+++ .+|..+..+++|++|++++|.+
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 55555443322 344455555555555555555555555555555555555555544 3444555555555555555555
Q ss_pred cccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCC-CCCcEEEccCCccceecC
Q 035786 275 EGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGN-ASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 275 ~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~-~~l~~l~ls~N~l~g~~~ 353 (693)
++..|. .|..+++|+.|++++|++++..+..+..+++|+.|+|++|++++..|.. +..+ ..|+.|++++|.++++++
T Consensus 188 ~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 188 EQLSPT-AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE-LQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CEECTT-TTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSS-CCCCCTTCCEEECTTCCEECSGG
T ss_pred CCcCHH-HhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHH-HHhhhccCCEEEccCCCeecccC
Confidence 543332 2355556666666666666555555555666666666666666555532 2333 356666666666666544
Q ss_pred C----CCCCCCCEEEccCCcceeecCCCc
Q 035786 354 S----SSFRKFSLIDLSSNYFQGTVADDR 378 (693)
Q Consensus 354 ~----~~~~~l~~ldLs~N~l~g~ip~~~ 378 (693)
. ..++..+.+....+.+.+..|..+
T Consensus 266 ~~~~~~~l~~~~~~~~~~~~~~C~~p~~~ 294 (306)
T 2z66_A 266 HQSFLQWIKDQRQLLVEVERMECATPSDK 294 (306)
T ss_dssp GHHHHHHHHHTGGGBSCGGGCBEEESGGG
T ss_pred hHHHHHHHHhhhhhhccccccccCCchhh
Confidence 2 112223334445566666666544
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-30 Score=268.96 Aligned_cols=259 Identities=23% Similarity=0.227 Sum_probs=179.9
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCc--CCCcccCCCccCCEEecccCcCCccCccccCCCCCCCE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSG--SIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSN 170 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 170 (693)
+.|+.|++++|.+. .+|..+...+++|++|+|++|.++. .+|..+..+++|++|+|++|.+. .+|..+..+++|++
T Consensus 28 ~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~ 105 (306)
T 2z66_A 28 SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEH 105 (306)
T ss_dssp TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCE
T ss_pred CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCE
Confidence 46777788877776 4555433357788888888887763 23556667777888888888776 45666777788888
Q ss_pred EEccCCCCCCcCc-hhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccc-cCCccccCCCCCCEEEccCC
Q 035786 171 LDLSRNLLTGEIP-NAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTG-FIPSEVGNLDKLIELDLSKN 248 (693)
Q Consensus 171 L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N 248 (693)
|++++|.+++..+ ..+..+++|++|++++|.+++..|..+..+++|++|++++|.+++ .+|..+..+++|++|++++|
T Consensus 106 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n 185 (306)
T 2z66_A 106 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 185 (306)
T ss_dssp EECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred EECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCC
Confidence 8888887775544 467777788888888887777777777777788888888887776 56777777788888888888
Q ss_pred cCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCC-CCCEEEccCCcCcccC
Q 035786 249 SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRP-NLRFLDLSRNNITGSW 327 (693)
Q Consensus 249 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~-~L~~L~Ls~N~l~g~~ 327 (693)
.+++..|..+..+++|++|+|++|.+++. +...|..+++|+.|++++|++++..|..+..++ +|++|+|++|.+++..
T Consensus 186 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 186 QLEQLSPTAFNSLSSLQVLNMSHNNFFSL-DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCSBC-CSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred CcCCcCHHHhcCCCCCCEEECCCCccCcc-ChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 88777777777778888888888877753 333456777788888888888777777777764 7888888888777643
Q ss_pred CccC-cCCCCCCcEEEccCCccceecCC
Q 035786 328 PILS-TNGNASGAVFNISNNMLYGDLNS 354 (693)
Q Consensus 328 p~~~-~~~~~~l~~l~ls~N~l~g~~~~ 354 (693)
+... .......+.+.+..+.+.+..|.
T Consensus 265 ~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 265 EHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp GGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred ChHHHHHHHHhhhhhhccccccccCCch
Confidence 2110 01111222334455666666553
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-29 Score=263.39 Aligned_cols=265 Identities=25% Similarity=0.322 Sum_probs=227.6
Q ss_pred CCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEc
Q 035786 94 LLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDL 173 (693)
Q Consensus 94 ~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 173 (693)
+|+.++++++.+. .+|..+ .+.|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccC---CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 4566666666655 466543 478999999999999888889999999999999999999888999999999999999
Q ss_pred cCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCccc--ccCCccccCCCCCCEEEccCCcCc
Q 035786 174 SRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT--GFIPSEVGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 174 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~ 251 (693)
++|.++ .+|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.++ +..+..+.++++|++|++++|.++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 999998 5676654 79999999999999888888999999999999999996 477889999999999999999998
Q ss_pred ccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccC
Q 035786 252 GSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILS 331 (693)
Q Consensus 252 g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~ 331 (693)
. +|..+. ++|++|++++|.+++..+. .|..+++|+.|++++|++++..+..+..+++|+.|+|++|+++ .+|. .
T Consensus 185 ~-l~~~~~--~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~-~ 258 (330)
T 1xku_A 185 T-IPQGLP--PSLTELHLDGNKITKVDAA-SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG-G 258 (330)
T ss_dssp S-CCSSCC--TTCSEEECTTSCCCEECTG-GGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT-T
T ss_pred c-CCcccc--ccCCEEECCCCcCCccCHH-HhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCCh-h
Confidence 5 555443 7999999999999876554 4688999999999999999988889999999999999999998 7775 4
Q ss_pred cCCCCCCcEEEccCCccceecCC--------CCCCCCCEEEccCCcce
Q 035786 332 TNGNASGAVFNISNNMLYGDLNS--------SSFRKFSLIDLSSNYFQ 371 (693)
Q Consensus 332 ~~~~~~l~~l~ls~N~l~g~~~~--------~~~~~l~~ldLs~N~l~ 371 (693)
+..++.|+.|++++|++++..+. .....++.+++++|.+.
T Consensus 259 l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 259 LADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp TTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred hccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 57788999999999999864432 12367889999999885
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-29 Score=275.28 Aligned_cols=260 Identities=25% Similarity=0.311 Sum_probs=136.9
Q ss_pred cccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCC
Q 035786 89 LGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKL 168 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 168 (693)
+.++++|++|++++|.+.+..| +. .+++|++|+|++|.+++..+ ++++++|++|++++|.+.+. | .+..+++|
T Consensus 86 ~~~l~~L~~L~l~~n~l~~~~~--~~-~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L 158 (466)
T 1o6v_A 86 LKNLTKLVDILMNNNQIADITP--LA-NLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSL 158 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GT-TCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTC
T ss_pred hhccccCCEEECCCCccccChh--hc-CCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcc
Confidence 4556666666666666654333 33 36666666666666654322 56666666666666665532 2 23333333
Q ss_pred CEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCC
Q 035786 169 SNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKN 248 (693)
Q Consensus 169 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 248 (693)
++|+++ |.+.+. + .+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..| ++.+++|++|++++|
T Consensus 159 ~~L~l~-~~~~~~-~-~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 231 (466)
T 1o6v_A 159 QQLSFG-NQVTDL-K-PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGN 231 (466)
T ss_dssp SEEEEE-ESCCCC-G-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred cEeecC-CcccCc-h-hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCC
Confidence 333332 222211 1 245555666666666665532 235555666666666666554433 455555666666666
Q ss_pred cCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCC
Q 035786 249 SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 249 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p 328 (693)
.+++. ..+..+++|++|++++|.+++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++..|
T Consensus 232 ~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 304 (466)
T 1o6v_A 232 QLKDI--GTLASLTNLTDLDLANNQISNLAP---LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 304 (466)
T ss_dssp CCCCC--GGGGGCTTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG
T ss_pred Ccccc--hhhhcCCCCCEEECCCCccccchh---hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh
Confidence 55542 235555556666666655554332 3455555555555555554333 4455555555555555554332
Q ss_pred ccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCccee
Q 035786 329 ILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQG 372 (693)
Q Consensus 329 ~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g 372 (693)
+..+++|+.|++++|++++..|...+++|+.|++++|.+++
T Consensus 305 ---~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 305 ---ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp ---GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCC
T ss_pred ---hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCC
Confidence 23445555555555555554444445555555555555554
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=290.61 Aligned_cols=270 Identities=24% Similarity=0.231 Sum_probs=235.6
Q ss_pred cccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCC
Q 035786 87 DSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELK 166 (693)
Q Consensus 87 ~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 166 (693)
..+.+++.|++|++++|.+.+..|..|+ .+++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|++++
T Consensus 93 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 171 (597)
T 3oja_B 93 YAFAYAHTIQKLYMGFNAIRYLPPHVFQ-NVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATT 171 (597)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTT-TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCT
T ss_pred HHhcCCCCCCEEECCCCcCCCCCHHHHc-CCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCC
Confidence 3678999999999999999987777776 499999999999999977677789999999999999999999999999999
Q ss_pred CCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEcc
Q 035786 167 KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLS 246 (693)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 246 (693)
+|++|+|++|.+++. + +..+++|+.|++++|.+++ +...++|+.|++++|.++...+. + .++|+.|+|+
T Consensus 172 ~L~~L~L~~N~l~~~-~--~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~ 240 (597)
T 3oja_B 172 SLQNLQLSSNRLTHV-D--LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQ 240 (597)
T ss_dssp TCCEEECTTSCCSBC-C--GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECC
T ss_pred cCcEEECcCCCCCCc-C--hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcccccccc-c--CCCCCEEECC
Confidence 999999999999965 2 5678999999999999875 34557899999999999865433 2 3689999999
Q ss_pred CCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCccc
Q 035786 247 KNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS 326 (693)
Q Consensus 247 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~ 326 (693)
+|.+++ +..+..+++|+.|+|++|.+++.+|.. |..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|+++ .
T Consensus 241 ~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~ 315 (597)
T 3oja_B 241 HNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHP-FVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-H 315 (597)
T ss_dssp SSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGG-GTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-C
T ss_pred CCCCCC--ChhhccCCCCCEEECCCCccCCCCHHH-hcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-c
Confidence 999997 468999999999999999999877765 5889999999999999997 5777788999999999999999 5
Q ss_pred CCccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcceeecC
Q 035786 327 WPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVA 375 (693)
Q Consensus 327 ~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g~ip 375 (693)
+|. .+..++.|+.|+|++|.+.+. +...++.|+.|++++|+++|..+
T Consensus 316 i~~-~~~~l~~L~~L~L~~N~l~~~-~~~~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 316 VER-NQPQFDRLENLYLDHNSIVTL-KLSTHHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp CGG-GHHHHTTCSEEECCSSCCCCC-CCCTTCCCSEEECCSSCEEHHHH
T ss_pred cCc-ccccCCCCCEEECCCCCCCCc-ChhhcCCCCEEEeeCCCCCChhH
Confidence 664 346778999999999999864 56788999999999999998643
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-29 Score=275.19 Aligned_cols=298 Identities=25% Similarity=0.312 Sum_probs=250.7
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.+++.+++.+.... .+ +.+..+++|++|++++|.+.+..| +. .+++|++|+|++|.+++..| ++++
T Consensus 46 ~~l~~L~l~~~~i~---~l------~~~~~l~~L~~L~Ls~n~l~~~~~--~~-~l~~L~~L~l~~n~l~~~~~--~~~l 111 (466)
T 1o6v_A 46 DQVTTLQADRLGIK---SI------DGVEYLNNLTQINFSNNQLTDITP--LK-NLTKLVDILMNNNQIADITP--LANL 111 (466)
T ss_dssp HTCCEEECCSSCCC---CC------TTGGGCTTCCEEECCSSCCCCCGG--GT-TCTTCCEEECCSSCCCCCGG--GTTC
T ss_pred ccccEEecCCCCCc---cC------cchhhhcCCCEEECCCCccCCchh--hh-ccccCCEEECCCCccccChh--hcCC
Confidence 36788888764321 22 246789999999999999886544 65 59999999999999997655 9999
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEc
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNL 221 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 221 (693)
++|++|+|++|.+++..+ +.++++|++|++++|.+++ +| .+..+++|+.|+++ |.+.+.. .+.++++|+.|++
T Consensus 112 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l 184 (466)
T 1o6v_A 112 TNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDI 184 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEEC
Confidence 999999999999986543 8999999999999999986 44 58999999999996 5665443 3899999999999
Q ss_pred cCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCC
Q 035786 222 SDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG 301 (693)
Q Consensus 222 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g 301 (693)
++|.+++. ..+..+++|++|++++|.+++..| ++.+++|++|++++|.+++. + .+..+++|+.|++++|.+++
T Consensus 185 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~--~l~~l~~L~~L~l~~n~l~~ 257 (466)
T 1o6v_A 185 SSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-G--TLASLTNLTDLDLANNQISN 257 (466)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-G--GGGGCTTCSEEECCSSCCCC
T ss_pred cCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc-h--hhhcCCCCCEEECCCCcccc
Confidence 99999864 358999999999999999998766 78899999999999999853 3 35788999999999999998
Q ss_pred cCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcceeecCCCcC--
Q 035786 302 ALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRG-- 379 (693)
Q Consensus 302 ~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g~ip~~~~-- 379 (693)
..| +..+++|+.|++++|++++..| +..++.|+.|++++|++.+..+...+++|+.|++++|.+++..|....
T Consensus 258 ~~~--~~~l~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~ 332 (466)
T 1o6v_A 258 LAP--LSGLTKLTELKLGANQISNISP---LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTK 332 (466)
T ss_dssp CGG--GTTCTTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGGGGGCTT
T ss_pred chh--hhcCCCCCEEECCCCccCcccc---ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchhhccCcc
Confidence 766 8889999999999999997544 567889999999999999877667889999999999999998763211
Q ss_pred -cccccCCCcCCCC
Q 035786 380 -RNVSLGRNCLQSV 392 (693)
Q Consensus 380 -~~~~l~~n~l~g~ 392 (693)
+.+.+++|.+.+.
T Consensus 333 L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 333 LQRLFFYNNKVSDV 346 (466)
T ss_dssp CCEEECCSSCCCCC
T ss_pred CCEeECCCCccCCc
Confidence 3577888888775
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=261.90 Aligned_cols=297 Identities=19% Similarity=0.279 Sum_probs=236.8
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
..++.+++++.... .+ ..+..+++|++|++++|.+.+ +|+ +. .+++|++|+|++|.+++ + +.|.++
T Consensus 44 ~~L~~L~l~~~~i~---~~------~~~~~~~~L~~L~l~~n~i~~-~~~-~~-~l~~L~~L~L~~n~i~~-~-~~~~~l 109 (347)
T 4fmz_A 44 ESITKLVVAGEKVA---SI------QGIEYLTNLEYLNLNGNQITD-ISP-LS-NLVKLTNLYIGTNKITD-I-SALQNL 109 (347)
T ss_dssp TTCSEEECCSSCCC---CC------TTGGGCTTCCEEECCSSCCCC-CGG-GT-TCTTCCEEECCSSCCCC-C-GGGTTC
T ss_pred ccccEEEEeCCccc---cc------hhhhhcCCccEEEccCCcccc-chh-hh-cCCcCCEEEccCCcccC-c-hHHcCC
Confidence 46778888764321 12 247788999999999998875 454 54 59999999999999886 3 468999
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEc
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNL 221 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 221 (693)
++|++|+|++|.+.+. |. +..+++|++|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++
T Consensus 110 ~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l 184 (347)
T 4fmz_A 110 TNLRELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSL 184 (347)
T ss_dssp TTCSEEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEEC
T ss_pred CcCCEEECcCCcccCc-hh-hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEc
Confidence 9999999999999854 43 88999999999999976655544 8899999999999999886544 888999999999
Q ss_pred cCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCC
Q 035786 222 SDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG 301 (693)
Q Consensus 222 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g 301 (693)
++|.+++.. . +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++
T Consensus 185 ~~n~l~~~~-~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~ 257 (347)
T 4fmz_A 185 NYNQIEDIS-P-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP---LANLSQLTWLEIGTNQISD 257 (347)
T ss_dssp TTSCCCCCG-G-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCC
T ss_pred cCCcccccc-c-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc---hhcCCCCCEEECCCCccCC
Confidence 999998643 3 8889999999999999987655 8889999999999999985433 5788999999999999987
Q ss_pred cCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEEccCCcceeecCCC-c
Q 035786 302 ALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLIDLSSNYFQGTVADD-R 378 (693)
Q Consensus 302 ~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ldLs~N~l~g~ip~~-~ 378 (693)
. ..+..+++|+.|++++|++++. | .+..+++|+.|++++|++.+..+. ..+++|+.|++++|++++..|.. +
T Consensus 258 ~--~~~~~l~~L~~L~l~~n~l~~~-~--~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l 332 (347)
T 4fmz_A 258 I--NAVKDLTKLKMLNVGSNQISDI-S--VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASL 332 (347)
T ss_dssp C--GGGTTCTTCCEEECCSSCCCCC-G--GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGC
T ss_pred C--hhHhcCCCcCEEEccCCccCCC-h--hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhh
Confidence 4 4678889999999999999864 4 356778899999999999876654 56789999999999998876621 1
Q ss_pred C--cccccCCCcC
Q 035786 379 G--RNVSLGRNCL 389 (693)
Q Consensus 379 ~--~~~~l~~n~l 389 (693)
. ..+++++|.+
T Consensus 333 ~~L~~L~l~~N~i 345 (347)
T 4fmz_A 333 SKMDSADFANQVI 345 (347)
T ss_dssp TTCSEESSSCC--
T ss_pred hccceeehhhhcc
Confidence 1 2456666654
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=266.38 Aligned_cols=226 Identities=23% Similarity=0.280 Sum_probs=202.1
Q ss_pred CCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCee
Q 035786 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195 (693)
Q Consensus 116 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 195 (693)
..++++.|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..+..+++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3689999999999998 78989999999999999999999 89999999999999999999999 889999999999999
Q ss_pred ecccccCCCcCcccccC---------CCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccc
Q 035786 196 NLASNFFTGQIPSGLYS---------LSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAK 266 (693)
Q Consensus 196 ~Ls~N~l~g~~p~~~~~---------l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 266 (693)
++++|++.+.+|..+.. +++|++|+|++|+++ .+|..++++++|++|++++|.+++ +|..+..+++|++
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~ 233 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEE 233 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCE
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCE
Confidence 99999999999988765 899999999999998 788889999999999999999985 5667899999999
Q ss_pred cccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCC
Q 035786 267 LVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNN 346 (693)
Q Consensus 267 L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N 346 (693)
|+|++|++.+.+|.. |..+++|+.|++++|++.+.+|..+..+++|+.|+|++|++.|.+|. .+..++.++.++++.|
T Consensus 234 L~Ls~n~~~~~~p~~-~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~-~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 234 LDLRGCTALRNYPPI-FGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPS-LIAQLPANCIILVPPH 311 (328)
T ss_dssp EECTTCTTCCBCCCC-TTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCG-GGGGSCTTCEEECCGG
T ss_pred EECcCCcchhhhHHH-hcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccH-HHhhccCceEEeCCHH
Confidence 999999998888875 47888999999999999999999899999999999999999999985 4566777777777766
Q ss_pred cc
Q 035786 347 ML 348 (693)
Q Consensus 347 ~l 348 (693)
.+
T Consensus 312 ~~ 313 (328)
T 4fcg_A 312 LQ 313 (328)
T ss_dssp GS
T ss_pred HH
Confidence 55
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-30 Score=274.46 Aligned_cols=146 Identities=15% Similarity=0.202 Sum_probs=127.7
Q ss_pred HHhCCCCccCccccCCeeeEEEEEe----CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 509 RATGNFSETNLIKKGHSGDLFKGTL----AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 509 ~at~~~~~~~~ig~G~~G~Vy~~~~----~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
+..+.|...+.||+|+||+||+|+. ..++.||||++.... ...++.+|+++|.++ +|||||++++++.+ ++..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~-~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRK-NDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-TTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEE-CCEE
Confidence 3456788999999999999999974 246889999986533 345688999999998 69999999988765 5789
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEECC
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLGS 662 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~D 662 (693)
++|||||++|+|.++++ .+++.+...|+.|++.||+|||+. +||||||||+|||++.+ +.+||+|
T Consensus 96 ~lvmE~~~g~~L~~~~~-----------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~D 161 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-----------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVD 161 (361)
T ss_dssp EEEEECCCCCCHHHHHT-----------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECC
T ss_pred EEEEeCCCcccHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECc
Confidence 99999999999999984 288899999999999999999998 99999999999999977 7999999
Q ss_pred cccccccC
Q 035786 663 LSELHAQG 670 (693)
Q Consensus 663 fgla~~~~ 670 (693)
||+|+...
T Consensus 162 FGla~~~~ 169 (361)
T 4f9c_A 162 FGLAQGTH 169 (361)
T ss_dssp CTTCEECT
T ss_pred CCCCcccC
Confidence 99998763
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-30 Score=274.69 Aligned_cols=250 Identities=20% Similarity=0.189 Sum_probs=205.5
Q ss_pred cccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCC-CcCCCcccC-------CCccCCEEecccCcCCccCcc
Q 035786 89 LGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSL-SGSIPGSFG-------NLSRLNVLYLSGNSLAGNVPA 160 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l-~g~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~ 160 (693)
....+.|+.+++++|.+ .+|..+.. . |+.|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~-~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTD-I--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHH-H--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHH-H--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 45567788889999999 88988765 2 99999999999 556777766 799999999999999999998
Q ss_pred cc--CCCCCCCEEEccCCCCCCcCchhhhcC-----cCCCeeecccccCCCcCcccccCCCCCCEEEccCCccccc--CC
Q 035786 161 TL--GELKKLSNLDLSRNLLTGEIPNAISLL-----GNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGF--IP 231 (693)
Q Consensus 161 ~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--~p 231 (693)
.+ ..+++|++|+|++|.+++. |..+..+ ++|++|+|++|.+++..|..++.+++|++|+|++|++.+. +|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 76 8999999999999999987 8888887 8999999999999988889999999999999999998775 33
Q ss_pred ccc--cCCCCCCEEEccCCcCcc--cCc-hhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCccc
Q 035786 232 SEV--GNLDKLIELDLSKNSISG--SLP-LELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPAT 306 (693)
Q Consensus 232 ~~~--~~l~~L~~L~Ls~N~l~g--~~p-~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~ 306 (693)
..+ +.+++|++|++++|++++ .++ ..+.++++|++|++++|++++.+|...+..+++|+.|++++|+++ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 444 889999999999999983 222 345678899999999999988776555667788999999999888 67777
Q ss_pred ccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccce
Q 035786 307 LFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYG 350 (693)
Q Consensus 307 l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g 350 (693)
+. ++|++|||++|+|++. |. +..++.|+.|++++|++++
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~--~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PS--PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CC--TTTSCEEEEEECTTCTTTC
T ss_pred cc--CCceEEECCCCCCCCC-hh--HhhCCCCCEEeccCCCCCC
Confidence 66 7888888888888865 53 4556666666666666654
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=286.33 Aligned_cols=162 Identities=19% Similarity=0.183 Sum_probs=137.2
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHH---HHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESY---MMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f---~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
++|...++||+|+||+||+|+. .+|+.||||++.+.. .....+ ..|+++++.++|||||++++++.+ ++..
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~-~~~l 267 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKL 267 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-SSEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE-CCEE
Confidence 4588889999999999999996 469999999996532 122233 344677888999999999988765 5789
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
|+|||||++|+|.++|.+.. .++......|+.||+.||+|||.. +||||||||+|||||+++.+||+||
T Consensus 268 ylVmEy~~GGdL~~~l~~~~--------~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DF 336 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG--------VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDL 336 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEecCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEeccc
Confidence 99999999999999997643 488999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+|+....... ...+||++|||
T Consensus 337 GlA~~~~~~~~---~t~~GTp~YmA 358 (689)
T 3v5w_A 337 GLACDFSKKKP---HASVGTHGYMA 358 (689)
T ss_dssp TTCEECSSCCC---CSCCSCGGGCC
T ss_pred ceeeecCCCCC---CCccCCcCccC
Confidence 99998754332 34789999998
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=270.07 Aligned_cols=262 Identities=21% Similarity=0.226 Sum_probs=225.4
Q ss_pred cCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhh
Q 035786 108 SIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAIS 187 (693)
Q Consensus 108 ~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 187 (693)
.+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..+.
T Consensus 45 ~iP~~~---~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 121 (353)
T 2z80_A 45 SIPSGL---TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFK 121 (353)
T ss_dssp SCCTTC---CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHT
T ss_pred cccccc---cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhC
Confidence 456543 46899999999999987777999999999999999999998888999999999999999999976556699
Q ss_pred cCcCCCeeecccccCCCcCc-ccccCCCCCCEEEccCC-cccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccc
Q 035786 188 LLGNLTRLNLASNFFTGQIP-SGLYSLSSIQFLNLSDN-ALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLA 265 (693)
Q Consensus 188 ~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 265 (693)
.+++|++|++++|.+++..+ ..+..+++|++|++++| .+++..|..++++++|++|++++|.+++..|..+..+++|+
T Consensus 122 ~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 201 (353)
T 2z80_A 122 PLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVS 201 (353)
T ss_dssp TCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEE
T ss_pred CCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCC
Confidence 99999999999999985433 47899999999999999 57777788999999999999999999999999999999999
Q ss_pred ccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCccccc---CCCCCCEEEccCCcCcc----cCCccCcCCCCCC
Q 035786 266 KLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF---LRPNLRFLDLSRNNITG----SWPILSTNGNASG 338 (693)
Q Consensus 266 ~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~---~~~~L~~L~Ls~N~l~g----~~p~~~~~~~~~l 338 (693)
+|++++|.++ .+|...+..+++|+.|++++|++++..+..+. ..+.++.++|++|.+++ .+|. .+..+++|
T Consensus 202 ~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~-~l~~l~~L 279 (353)
T 2z80_A 202 HLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMK-LLNQISGL 279 (353)
T ss_dssp EEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHH-HHHTCTTC
T ss_pred eecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHH-HHhcccCC
Confidence 9999999986 55655556689999999999999987665443 35778999999999986 3553 34678899
Q ss_pred cEEEccCCccceecCC---CCCCCCCEEEccCCcceeecC
Q 035786 339 AVFNISNNMLYGDLNS---SSFRKFSLIDLSSNYFQGTVA 375 (693)
Q Consensus 339 ~~l~ls~N~l~g~~~~---~~~~~l~~ldLs~N~l~g~ip 375 (693)
+.|++++|+++ .+|. ..+++|+.|+|++|+++|..|
T Consensus 280 ~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 280 LELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 99999999998 5665 467899999999999998765
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-28 Score=259.13 Aligned_cols=281 Identities=22% Similarity=0.294 Sum_probs=237.9
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.++..+++++.... .+ ..+..+++|++|++++|.+.. +| .+. .+++|++|+|++|.+++.. . +.++
T Consensus 66 ~~L~~L~l~~n~i~---~~------~~~~~l~~L~~L~L~~n~i~~-~~-~~~-~l~~L~~L~l~~n~i~~~~-~-~~~l 131 (347)
T 4fmz_A 66 TNLEYLNLNGNQIT---DI------SPLSNLVKLTNLYIGTNKITD-IS-ALQ-NLTNLRELYLNEDNISDIS-P-LANL 131 (347)
T ss_dssp TTCCEEECCSSCCC---CC------GGGTTCTTCCEEECCSSCCCC-CG-GGT-TCTTCSEEECTTSCCCCCG-G-GTTC
T ss_pred CCccEEEccCCccc---cc------hhhhcCCcCCEEEccCCcccC-ch-HHc-CCCcCCEEECcCCcccCch-h-hccC
Confidence 46788888875322 22 137789999999999998875 45 455 5999999999999998653 3 8999
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEc
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNL 221 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 221 (693)
++|++|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+. +. +..+++|+.|++
T Consensus 132 ~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l 206 (347)
T 4fmz_A 132 TKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTA 206 (347)
T ss_dssp TTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEEC
T ss_pred CceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeec
Confidence 9999999999977666554 8999999999999999986544 88999999999999999864 33 889999999999
Q ss_pred cCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCC
Q 035786 222 SDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG 301 (693)
Q Consensus 222 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g 301 (693)
++|.+++..+ +..+++|++|++++|.+++..+ +..+++|++|++++|.+++. + .+..+++|+.|++++|++++
T Consensus 207 ~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~--~~~~l~~L~~L~l~~n~l~~ 279 (347)
T 4fmz_A 207 YVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-N--AVKDLTKLKMLNVGSNQISD 279 (347)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G--GGTTCTTCCEEECCSSCCCC
T ss_pred ccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-h--hHhcCCCcCEEEccCCccCC
Confidence 9999987544 8899999999999999997554 89999999999999999863 3 36889999999999999997
Q ss_pred cCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcce
Q 035786 302 ALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQ 371 (693)
Q Consensus 302 ~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~ 371 (693)
. ..+..+++|+.|++++|++++..|. .+..+++|+.|++++|++++..|...+++|+.||+++|.|+
T Consensus 280 ~--~~~~~l~~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 280 I--SVLNNLSQLNSLFLNNNQLGNEDME-VIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVIK 346 (347)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCGGGHH-HHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC---
T ss_pred C--hhhcCCCCCCEEECcCCcCCCcChh-HhhccccCCEEEccCCccccccChhhhhccceeehhhhccc
Confidence 5 4678899999999999999987664 45678999999999999999888788999999999999985
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=265.33 Aligned_cols=184 Identities=36% Similarity=0.623 Sum_probs=159.1
Q ss_pred CccCHHHHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEE
Q 035786 500 DSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCL 577 (693)
Q Consensus 500 ~~~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~ 577 (693)
..+++.++..++++|...+.||+|+||.||+|+..+|+.||||++...... ...|.+|++++.+++|||||+++++|.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 468899999999999999999999999999999888999999999754322 346999999999999999999999987
Q ss_pred cCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 578 EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 578 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
+ +...++||||+++|+|.++++.... ....++|..+..|+.+++.||+|||+.+.++|+||||||+|||+++++.
T Consensus 98 ~-~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~ 172 (326)
T 3uim_A 98 T-PTERLLVYPYMANGSVASCLRERPE----SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 172 (326)
T ss_dssp C-SSCCEEEEECCTTCBHHHHHHCCST----TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCC
T ss_pred c-CCceEEEEEeccCCCHHHHHHhccc----cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCC
Confidence 5 4678999999999999999986432 1245999999999999999999999998889999999999999999999
Q ss_pred eEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 658 VRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 658 ~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+||+|||+++..........+...||+.|+|
T Consensus 173 ~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~a 203 (326)
T 3uim_A 173 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 203 (326)
T ss_dssp EEECCCSSCEECCSSSSCEECCCCSCGGGCC
T ss_pred EEeccCccccccCcccccccccccCCcCccC
Confidence 9999999999875554444555668888876
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-31 Score=275.77 Aligned_cols=248 Identities=24% Similarity=0.261 Sum_probs=214.3
Q ss_pred CCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcC-CccCccccC-------CCCCCCEEEccCCCCCCcCchhh-
Q 035786 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSL-AGNVPATLG-------ELKKLSNLDLSRNLLTGEIPNAI- 186 (693)
Q Consensus 116 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~- 186 (693)
..++|++|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 367899999999999 788877654 99999999999 456777766 79999999999999999999987
Q ss_pred -hcCcCCCeeecccccCCCcCcccccCC-----CCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCccc--Cchhh
Q 035786 187 -SLLGNLTRLNLASNFFTGQIPSGLYSL-----SSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGS--LPLEL 258 (693)
Q Consensus 187 -~~l~~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--~p~~~ 258 (693)
..+++|++|+|++|.+++. |..+..+ ++|++|+|++|++++..|..|+++++|++|++++|++.+. .|..+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 195 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH
Confidence 8999999999999999987 8878776 9999999999999998889999999999999999999876 34455
Q ss_pred --hcCccccccccccccccc--cCCCcccCCCCCCCEEEccCCcCCCcCc-ccccCCCCCCEEEccCCcCcccCCccCcC
Q 035786 259 --RGLRNLAKLVISENGLEG--QLSEGLFPTLDQLQVVDLSGNKLDGALP-ATLFLRPNLRFLDLSRNNITGSWPILSTN 333 (693)
Q Consensus 259 --~~l~~L~~L~Ls~N~l~g--~i~~~~~~~l~~L~~L~Ls~N~l~g~~p-~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~ 333 (693)
..+++|++|+|++|++++ .++..++..+++|+.|++++|++++.+| ..+..+++|++|+|++|+|+ .+|....
T Consensus 196 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~- 273 (312)
T 1wwl_A 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP- 273 (312)
T ss_dssp CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-
T ss_pred HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-
Confidence 899999999999999983 4455556778999999999999999876 45666899999999999999 7885433
Q ss_pred CCCCCcEEEccCCccceecCCCCCCCCCEEEccCCccee
Q 035786 334 GNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQG 372 (693)
Q Consensus 334 ~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g 372 (693)
.+|+.|++++|++++......+++|+.|+|++|++++
T Consensus 274 --~~L~~L~Ls~N~l~~~p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRNPSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp --SEEEEEECCSSCCCSCCCTTTSCEEEEEECTTCTTTC
T ss_pred --CCceEEECCCCCCCCChhHhhCCCCCEEeccCCCCCC
Confidence 7899999999999987333677889999999999976
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-29 Score=258.05 Aligned_cols=209 Identities=29% Similarity=0.325 Sum_probs=146.6
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCC-CCCcCchhhhcCcCCCee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL-LTGEIPNAISLLGNLTRL 195 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L 195 (693)
.++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..+..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4577888888888877666777888888888888888877777777888888888888886 665556777777777777
Q ss_pred ecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc
Q 035786 196 NLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 196 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
++++|.+++..|..+..+++|++|++++|++++..+..|+.+++|++|++++|++++..+..+.++++|++|++++|.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 77777777666777777777777777777777666666777777777777777777655555666666666666666666
Q ss_pred ccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCccc
Q 035786 276 GQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS 326 (693)
Q Consensus 276 g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~ 326 (693)
+..|.. |..+++|+.|++++|++++..+..+..+++|+.|++++|.+++.
T Consensus 191 ~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 191 HVHPHA-FRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp EECTTT-TTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred ccCHhH-ccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 544433 35566666666666666665555566666666666666666543
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=265.53 Aligned_cols=324 Identities=19% Similarity=0.146 Sum_probs=253.4
Q ss_pred CCCCCCCCCCCCCcceeecCCCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCcc
Q 035786 42 RDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQ 121 (693)
Q Consensus 42 ~~W~~~~~~C~~W~gv~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~ 121 (693)
++|....++|+.|.+..|.-..| .++..... ....+ .-..++.++.++++++.+. .+|+.+...+++|+
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~-~i~~~~~~----~~~~~-----~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~ 72 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDV-HIDMQTQD----VYFGF-----EDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVE 72 (390)
T ss_dssp ---CCEECBCC------EEEESC-EECSSCCC----CEESC-----SSGGGCCCSEEEEESCEES-EECTHHHHHCCCCS
T ss_pred CCCCCccceehhhhhhccceeee-eeeccccc----ccccc-----cccccCCceEEEecCCchh-hCChhHhcccccCc
Confidence 57876666666677766631111 11111100 00000 1235788999999998865 56666444599999
Q ss_pred EEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccccc
Q 035786 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201 (693)
Q Consensus 122 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 201 (693)
+|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.++...+..+..+++|++|++++|.
T Consensus 73 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~ 152 (390)
T 3o6n_A 73 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 152 (390)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCc
Confidence 99999999998888899999999999999999999888899999999999999999995544557899999999999999
Q ss_pred CCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCc
Q 035786 202 FTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEG 281 (693)
Q Consensus 202 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~ 281 (693)
+++..|..+..+++|+.|++++|++++. .++.+++|+.|++++|.+++. ...++|++|++++|.++.. |..
T Consensus 153 l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~ 223 (390)
T 3o6n_A 153 LERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP 223 (390)
T ss_dssp CCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC
T ss_pred cCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc
Confidence 9988888899999999999999999875 367789999999999999853 3456899999999999854 433
Q ss_pred ccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC-CCCCCC
Q 035786 282 LFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS-SSFRKF 360 (693)
Q Consensus 282 ~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~-~~~~~l 360 (693)
..++|+.|++++|++++. .++..+++|+.|+|++|++++..|. .+..++.|+.|++++|++++.... ..+++|
T Consensus 224 ---~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L 297 (390)
T 3o6n_A 224 ---VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYH-PFVKMQRLERLYISNNRLVALNLYGQPIPTL 297 (390)
T ss_dssp ---CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESG-GGTTCSSCCEEECCSSCCCEEECSSSCCTTC
T ss_pred ---ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChh-HccccccCCEEECCCCcCcccCcccCCCCCC
Confidence 347899999999999975 5788999999999999999987774 567889999999999999875433 567899
Q ss_pred CEEEccCCcceeecCCCcC-----cccccCCCcCCCC
Q 035786 361 SLIDLSSNYFQGTVADDRG-----RNVSLGRNCLQSV 392 (693)
Q Consensus 361 ~~ldLs~N~l~g~ip~~~~-----~~~~l~~n~l~g~ 392 (693)
+.|||++|.+++ +|..+. +.+++++|.+...
T Consensus 298 ~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~ 333 (390)
T 3o6n_A 298 KVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL 333 (390)
T ss_dssp CEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC
T ss_pred CEEECCCCccee-cCccccccCcCCEEECCCCcccee
Confidence 999999999984 555443 4678899988765
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=254.45 Aligned_cols=254 Identities=20% Similarity=0.205 Sum_probs=221.6
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 200 (693)
+.++.+++.++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..+..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 57888888887 456544 479999999999999888889999999999999999999888999999999999999999
Q ss_pred c-CCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCC
Q 035786 201 F-FTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLS 279 (693)
Q Consensus 201 ~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~ 279 (693)
. ++...|..+..+++|++|++++|++++..|..+.++++|++|++++|++++..+..+..+++|++|++++|++++ ++
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-EC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc-cC
Confidence 8 776668899999999999999999999889999999999999999999998888889999999999999999985 55
Q ss_pred CcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCC-CCC
Q 035786 280 EGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSS-SFR 358 (693)
Q Consensus 280 ~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~-~~~ 358 (693)
...|..+++|+.|++++|++++..|..+..+++|+.|++++|++++. |...+..++.|+.|++++|++.++++.. ...
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~ 248 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSAL-PTEALAPLRALQYLRLNDNPWVCDCRARPLWA 248 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC-CHHHHTTCTTCCEEECCSSCEECSGGGHHHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcC-CHHHcccCcccCEEeccCCCccCCCCcHHHHH
Confidence 55578899999999999999999999999999999999999999964 4345678899999999999999887652 112
Q ss_pred CCCEEEccCCcceeecCCCcC
Q 035786 359 KFSLIDLSSNYFQGTVADDRG 379 (693)
Q Consensus 359 ~l~~ldLs~N~l~g~ip~~~~ 379 (693)
.++.++.+.|.+.+..|..+.
T Consensus 249 ~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp HHHHCCSEECCCBEEESGGGT
T ss_pred HHHhcccccCccccCCchHhC
Confidence 344455778888888887653
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.3e-28 Score=266.83 Aligned_cols=232 Identities=22% Similarity=0.180 Sum_probs=136.9
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..+..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 35556666666665555555666666666666666665555555666666666666666665444445555666666666
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCC-cccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDN-ALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
++|.+++..+..+..+++|+.|++++| .+....+..|.++++|++|++++|++++. | .+..+++|++|+|++|.+++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 666655444445556666666666653 33322233455666666666666666543 2 35555666666666666654
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecC
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~ 353 (693)
..|. .|..+++|+.|++++|++++..|..+..+++|+.|+|++|+|++ +|...+..+.+|+.|+|++|.+.+++.
T Consensus 233 ~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 233 IRPG-SFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS-LPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp ECGG-GGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC-CCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred cCcc-cccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc-cChHHhccccCCCEEEccCCCcCCCCC
Confidence 3332 34666666666666666666666666667777777777777763 333445556667777777777766554
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-27 Score=263.19 Aligned_cols=259 Identities=25% Similarity=0.281 Sum_probs=133.2
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+ +|. ..++|++|+|++|.+++ +| .|+++++|++|++++|++++ +|..+ ++|++|+
T Consensus 111 ~~L~~L~l~~n~l~~-l~~----~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~ 179 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSD----LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIA 179 (454)
T ss_dssp TTCCEEECCSSCCSC-CCS----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEE
T ss_pred CCCcEEECCCCccCc-ccC----CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEE
Confidence 445555555555543 221 12456666666666654 45 36666666666666666654 44332 3566666
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 252 (693)
+++|.+++ +| .++.+++|++|++++|.+++ +|... ++|+.|++++|+++ .+| .++.+++|++|++++|++++
T Consensus 180 L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 180 AGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp CCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS
T ss_pred CcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc
Confidence 66666654 44 45666666666666666654 33322 35666666666665 445 35666666666666666654
Q ss_pred cCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCc
Q 035786 253 SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILST 332 (693)
Q Consensus 253 ~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~ 332 (693)
+|.. +++|++|++++|++++ +|.. +++|+.|++++|++++. |.. .++|+.|++++|++++ +|.
T Consensus 252 -l~~~---~~~L~~L~l~~N~l~~-l~~~----~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~~--- 314 (454)
T 1jl5_A 252 -LPDL---PPSLEALNVRDNYLTD-LPEL----PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LCD--- 314 (454)
T ss_dssp -CCSC---CTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-ECC---
T ss_pred -cccc---ccccCEEECCCCcccc-cCcc----cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-ccC---
Confidence 3321 2456666666666654 3321 24566666666666541 110 1344444444444443 110
Q ss_pred CCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcceeecCCCcC--cccccCCCcCCC
Q 035786 333 NGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRG--RNVSLGRNCLQS 391 (693)
Q Consensus 333 ~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g~ip~~~~--~~~~l~~n~l~g 391 (693)
....|+.|++++|++++ +|. .+++|+.||+++|+++ .+|..+. +.+++++|.+.+
T Consensus 315 -~~~~L~~L~Ls~N~l~~-lp~-~~~~L~~L~L~~N~l~-~lp~~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 315 -LPPSLEELNVSNNKLIE-LPA-LPPRLERLIASFNHLA-EVPELPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp -CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCSS
T ss_pred -CcCcCCEEECCCCcccc-ccc-cCCcCCEEECCCCccc-cccchhhhccEEECCCCCCCc
Confidence 11345555555555554 332 2455555555555555 2444211 234555555555
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-29 Score=282.67 Aligned_cols=164 Identities=18% Similarity=0.244 Sum_probs=142.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
++|...+.||+|+||+||+|+. .+|+.||||++...... .+.+.+|+++|++++|||||++++++.+ +...++||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-DNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-SSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEee
Confidence 4678888999999999999996 46999999999754332 5678999999999999999999998875 5789999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC--CceEECCccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK--FEVRLGSLSELH 667 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~--~~~ki~Dfgla~ 667 (693)
|++|+|.++|.... ..+++.+...|+.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+
T Consensus 236 ~~gg~L~~~i~~~~-------~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~ 305 (573)
T 3uto_A 236 MSGGELFEKVADEH-------NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTA 305 (573)
T ss_dssp CCCCBHHHHHTCTT-------SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCE
T ss_pred cCCCcHHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecccee
Confidence 99999999996432 3489999999999999999999998 99999999999999854 899999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+..... .+..+||++|||
T Consensus 306 ~~~~~~~--~~~~~GT~~y~A 324 (573)
T 3uto_A 306 HLDPKQS--VKVTTGTAEFAA 324 (573)
T ss_dssp ECCTTSE--EEEECSSGGGCC
T ss_pred EccCCCc--eeeeEECccccC
Confidence 9854433 456789999997
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-27 Score=273.12 Aligned_cols=141 Identities=26% Similarity=0.338 Sum_probs=127.2
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.++.||+++|.+++-.|..|. .+++|++|||++|.|++..|.+|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~-~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFF-SFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTT-TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCCCCCHHHHh-CCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 3689999999999876666776 599999999999999988888999999999999999999988888899999999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCC-cCcccccCCCCCCEEEccCCcccccCCccc
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTG-QIPSGLYSLSSIQFLNLSDNALTGFIPSEV 234 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 234 (693)
|++|++++..+..|+++++|++|+|++|.+++ .+|..++.+++|++|++++|++++..|..+
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 99999998777789999999999999999976 468889999999999999999887665544
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-27 Score=262.98 Aligned_cols=232 Identities=22% Similarity=0.193 Sum_probs=161.9
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
++++.|+|++|.+++..+..|.++++|++|+|++|.+.+..+..|.++++|++|+|++|++++..+..+..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 45677777777777666677777777777777777777666667777777777777777777555556777777777777
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCc-ccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNA-LTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
++|.+++..+..|..+++|+.|+|++|+ +....+..|.++++|++|++++|+++. +| .+..+++|++|+|++|.+++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCc
Confidence 7777766555567777777777777743 333333456777777777777777763 34 36677777777777777775
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecC
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~ 353 (693)
..|. .|..+++|+.|++++|++++..|..+..+++|+.|+|++|+|++ +|...+..+..|+.|+|++|.|.+++.
T Consensus 222 ~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 222 IRPG-SFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL-LPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp ECTT-TTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC-CCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred cChh-hhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc-cChhHhccccCCCEEEcCCCCccCCCC
Confidence 4443 45777778888888888877777777777888888888888874 443455666777778888887777654
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=262.07 Aligned_cols=260 Identities=23% Similarity=0.303 Sum_probs=200.4
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|++|++++|.+.+ +| .++ .+++|++|++++|.+++ +|..+ .+|++|++++|.+++ +| .++++++|++|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~-~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQ-NSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIY 201 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCT-TCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECcCCCCCC-Cc-ccC-CCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEE
Confidence 689999999999987 88 465 59999999999999986 66544 589999999999997 66 699999999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 252 (693)
+++|.+++ +|... ++|++|++++|.++ .+|. ++.+++|++|++++|++++ +|.. +++|++|++++|++++
T Consensus 202 l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~ 271 (454)
T 1jl5_A 202 ADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD 271 (454)
T ss_dssp CCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC
T ss_pred CCCCcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc
Confidence 99999986 55432 58999999999998 6774 8999999999999999986 5543 4789999999999987
Q ss_pred cCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCc
Q 035786 253 SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILST 332 (693)
Q Consensus 253 ~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~ 332 (693)
+|.. +++|++|++++|.+++ +|. ..++|+.|++++|++++. +. ..++|+.|++++|++++ +|..
T Consensus 272 -l~~~---~~~L~~L~ls~N~l~~-l~~----~~~~L~~L~l~~N~l~~i-~~---~~~~L~~L~Ls~N~l~~-lp~~-- 335 (454)
T 1jl5_A 272 -LPEL---PQSLTFLDVSENIFSG-LSE----LPPNLYYLNASSNEIRSL-CD---LPPSLEELNVSNNKLIE-LPAL-- 335 (454)
T ss_dssp -CCCC---CTTCCEEECCSSCCSE-ESC----CCTTCCEEECCSSCCSEE-CC---CCTTCCEEECCSSCCSC-CCCC--
T ss_pred -cCcc---cCcCCEEECcCCccCc-ccC----cCCcCCEEECcCCcCCcc-cC---CcCcCCEEECCCCcccc-cccc--
Confidence 5543 4789999999999986 222 125788899999988862 21 12588899999998886 6632
Q ss_pred CCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCccee--ecCCCcC------------------cccccCCCcCCC
Q 035786 333 NGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQG--TVADDRG------------------RNVSLGRNCLQS 391 (693)
Q Consensus 333 ~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g--~ip~~~~------------------~~~~l~~n~l~g 391 (693)
+..|+.|++++|++++ +|. .+++|+.||+++|+++| .+|.++. +.+++++|.+++
T Consensus 336 --~~~L~~L~L~~N~l~~-lp~-~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 336 --PPRLERLIASFNHLAE-VPE-LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp --CTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------
T ss_pred --CCcCCEEECCCCcccc-ccc-hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCc
Confidence 4778889999998884 665 67788899999999888 7776653 245667777766
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=258.33 Aligned_cols=179 Identities=34% Similarity=0.520 Sum_probs=148.9
Q ss_pred cCHHHHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 035786 502 FTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHE 580 (693)
Q Consensus 502 ~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~ 580 (693)
+++.++..++++|...+.||+|+||.||+|+..+|+.||||++...... .+.|.+|++++++++|||||+++++|.+ +
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~ 107 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-R 107 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC-T
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C
Confidence 3444555678899999999999999999999888999999998765433 5689999999999999999999999875 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
+..++||||+++|+|.++++.... ....++|.++.+++.++++||+|||.. +|+||||||+||++++++.+||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl 180 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDL----PTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKI 180 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCC----CSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEE
T ss_pred CeEEEEEEcCCCCcHHHHHhccCC----CccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEE
Confidence 678999999999999999975432 124599999999999999999999998 9999999999999999999999
Q ss_pred CCcccccccCCCC-cceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSH-QNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~-~~~~~~~~~~~~y~a 688 (693)
+|||+++...... ....+...||+.|+|
T Consensus 181 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a 209 (321)
T 2qkw_B 181 TDFGISKKGTELDQTHLSTVVKGTLGYID 209 (321)
T ss_dssp CCCTTCEECSSSSCCCCBCCCEEETTTCC
T ss_pred eecccccccccccccccccccCCCccccC
Confidence 9999998764322 222333456777765
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-28 Score=269.76 Aligned_cols=174 Identities=18% Similarity=0.188 Sum_probs=148.0
Q ss_pred HHHHHHHhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEc
Q 035786 504 YEQLLRATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLE 578 (693)
Q Consensus 504 ~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~ 578 (693)
+.++...+++|...++||+|+||+||+|+.. +++.||||++.... ...+.+.+|++++.+++|||||+++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3444556778999999999999999999975 48899999996422 123458999999999999999999998875
Q ss_pred CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 579 HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 579 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
++..++|||||++|+|.++++... ..+++.....++.+++.||+|||.. +||||||||+|||+|+++.+
T Consensus 146 -~~~~~lV~Ey~~gg~L~~~l~~~~-------~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~v 214 (437)
T 4aw2_A 146 -DNNLYLVMDYYVGGDLLTLLSKFE-------DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHI 214 (437)
T ss_dssp -SSEEEEEECCCTTCBHHHHHHTTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred -CCEEEEEEecCCCCcHHHHHHHcc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCE
Confidence 468999999999999999997532 3489999999999999999999998 99999999999999999999
Q ss_pred EECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|||+++..........+..+||++|+|
T Consensus 215 kL~DFGla~~~~~~~~~~~~~~~GT~~Y~A 244 (437)
T 4aw2_A 215 RLADFGSCLKLMEDGTVQSSVAVGTPDYIS 244 (437)
T ss_dssp EECCCTTCEECCTTSCEECCSCCSCGGGCC
T ss_pred EEcchhhhhhcccCCCcccccccCCcCeeC
Confidence 999999998875544433455788988887
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=262.83 Aligned_cols=230 Identities=24% Similarity=0.226 Sum_probs=208.9
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.|+.|++++|.+.+..|..|. .+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~-~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFR-HLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTT-TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCccEEECcCCcCceECHHHcC-CCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 5789999999999988888886 499999999999999999999999999999999999999988788899999999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCCcCc-ccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCc
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIP-SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 251 (693)
|++|.++...+..+..+++|++|++++|...+.+| ..+..+++|++|+|++|++++. | .+..+++|++|+|++|.++
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~ 231 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFP 231 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCS
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCc
Confidence 99999997777789999999999999965544555 4688999999999999999964 5 5889999999999999999
Q ss_pred ccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCccc
Q 035786 252 GSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS 326 (693)
Q Consensus 252 g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~ 326 (693)
+..|..|.++++|++|+|++|++++..+. .|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+...
T Consensus 232 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 232 EIRPGSFHGLSSLKKLWVMNSQVSLIERN-AFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred ccCcccccCccCCCEEEeCCCcCceECHH-HhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 99999999999999999999999976554 468999999999999999988888888999999999999998743
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-28 Score=254.02 Aligned_cols=175 Identities=19% Similarity=0.253 Sum_probs=148.7
Q ss_pred CccCHHHHHHHhCC----------CCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCC
Q 035786 500 DSFTYEQLLRATGN----------FSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHA 567 (693)
Q Consensus 500 ~~~~~~~l~~at~~----------~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~ 567 (693)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++...... .+.|.+|++++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 36889999888875 455678999999999999975 7999999999764433 57799999999999999
Q ss_pred CccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCC
Q 035786 568 RLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQA 647 (693)
Q Consensus 568 niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~ 647 (693)
|||+++++|.. ++..++||||+++|+|.+++.. ..++|..+..++.++++||+|||+. +|+||||||
T Consensus 103 niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~---------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp 169 (321)
T 2c30_A 103 NVVEMYKSYLV-GEELWVLMEFLQGGALTDIVSQ---------VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKS 169 (321)
T ss_dssp TBCCEEEEEEE-TTEEEEEECCCCSCBHHHHHTT---------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred CcceEEEEEEE-CCEEEEEEecCCCCCHHHHHHh---------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCH
Confidence 99999999876 4689999999999999999864 2489999999999999999999998 999999999
Q ss_pred CCeeeCCCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 648 SSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 648 ~NILld~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+||+++.++.+||+|||+++........ .....||+.|+|
T Consensus 170 ~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~a 209 (321)
T 2c30_A 170 DSILLTLDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMA 209 (321)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSSSCC-BCCCCSCGGGCC
T ss_pred HHEEECCCCcEEEeeeeeeeecccCccc-cccccCCccccC
Confidence 9999999999999999999887443221 334567777765
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-27 Score=257.52 Aligned_cols=247 Identities=22% Similarity=0.212 Sum_probs=218.7
Q ss_pred ccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccc
Q 035786 120 LQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199 (693)
Q Consensus 120 L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 199 (693)
.+.++.+++.++ .+|..+. ++++.|+|++|++.+..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 456777777776 5676664 6899999999999998889999999999999999999988889999999999999999
Q ss_pred ccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCc-CcccCchhhhcCccccccccccccccccC
Q 035786 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNS-ISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 200 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
|.+++..+..|..+++|++|+|++|+++...+..|.++++|++|++++|+ ++...+..|.++++|++|+|++|+++ .+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~ 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EI 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SC
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cc
Confidence 99997777789999999999999999998888899999999999999954 55444557999999999999999998 45
Q ss_pred CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CC
Q 035786 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SS 356 (693)
Q Consensus 279 ~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~ 356 (693)
|. +..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..| ..+..+.+|+.|+|++|++++..+. ..
T Consensus 201 ~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 201 PN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIER-NAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp CC--CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECT-TSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred cc--cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEECh-hhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 64 5789999999999999999999999999999999999999997666 4677889999999999999975554 56
Q ss_pred CCCCCEEEccCCcceee
Q 035786 357 FRKFSLIDLSSNYFQGT 373 (693)
Q Consensus 357 ~~~l~~ldLs~N~l~g~ 373 (693)
+++|+.|+|++|.+...
T Consensus 278 l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 278 LHHLERIHLHHNPWNCN 294 (440)
T ss_dssp CTTCCEEECCSSCEECS
T ss_pred ccCCCEEEcCCCCccCC
Confidence 78999999999999764
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-28 Score=264.09 Aligned_cols=170 Identities=16% Similarity=0.174 Sum_probs=145.1
Q ss_pred HHHHHhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 035786 506 QLLRATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHE 580 (693)
Q Consensus 506 ~l~~at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~ 580 (693)
++....++|...++||+|+||+||+|+.. +++.||||++.... ...+.+.+|++++..++|||||+++++|.+ +
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~ 141 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD-D 141 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC-S
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE-C
Confidence 34445677888999999999999999975 58999999986422 224568899999999999999999998875 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
...++|||||++|+|.++++.. .+++.....++.+++.||+|||+. +|+||||||+|||+|+++.+||
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~---------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL 209 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY---------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKL 209 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEE
Confidence 6889999999999999999752 388999999999999999999998 9999999999999999999999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++.............+||+.|+|
T Consensus 210 ~DFG~a~~~~~~~~~~~~~~~gt~~Y~A 237 (410)
T 3v8s_A 210 ADFGTCMKMNKEGMVRCDTAVGTPDYIS 237 (410)
T ss_dssp CCCTTCEECCTTSEEECCSCCSCGGGCC
T ss_pred eccceeEeeccCCcccccCCcCCccccC
Confidence 9999999875544333445789999987
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-28 Score=264.47 Aligned_cols=174 Identities=17% Similarity=0.159 Sum_probs=147.1
Q ss_pred HHHHHHHhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEc
Q 035786 504 YEQLLRATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLE 578 (693)
Q Consensus 504 ~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~ 578 (693)
+.+.....++|...++||+|+||+||+|+.. +|+.||||++.... ...+.+.+|++++.+++|||||++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444445678999999999999999999974 69999999996532 123468899999999999999999998875
Q ss_pred CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 579 HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 579 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
++..|+|||||++|+|.+++++.. ..+++.....++.+|+.||+|||+. +||||||||+|||+|+++.+
T Consensus 133 -~~~~~lVmE~~~gg~L~~~l~~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~v 201 (412)
T 2vd5_A 133 -ENYLYLVMEYYVGGDLLTLLSKFG-------ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHI 201 (412)
T ss_dssp -SSEEEEEECCCCSCBHHHHHHHHS-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred -CCEEEEEEcCCCCCcHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCE
Confidence 468899999999999999997532 2489999999999999999999998 99999999999999999999
Q ss_pred EECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|||+++.............+||++|+|
T Consensus 202 kL~DFGla~~~~~~~~~~~~~~~Gt~~Y~A 231 (412)
T 2vd5_A 202 RLADFGSCLKLRADGTVRSLVAVGTPDYLS 231 (412)
T ss_dssp EECCCTTCEECCTTSCEECSSCCSCGGGCC
T ss_pred EEeechhheeccCCCccccceeccccCcCC
Confidence 999999999875443333344688999987
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=252.78 Aligned_cols=164 Identities=18% Similarity=0.274 Sum_probs=141.6
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
.++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++++++|||||++++++.+ ++..++|
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv 92 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-EKTLYLI 92 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCEEEEE
Confidence 34677889999999999999996 57999999999754333 4578899999999999999999999875 5689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... .+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 93 ~e~~~~~~L~~~l~~~~--------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 161 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG--------RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFS 161 (328)
T ss_dssp ECCCTTCBHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCC
T ss_pred EECCCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCc
Confidence 99999999999997543 489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .+..+||++|+|
T Consensus 162 ~~~~~~~~--~~~~~gt~~y~a 181 (328)
T 3fe3_A 162 NEFTVGGK--LDAFCGAPPYAA 181 (328)
T ss_dssp GGGSSSCG--GGTTSSSGGGCC
T ss_pred eecCCCCc--cccccCCcceeC
Confidence 87643322 344678888876
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=248.94 Aligned_cols=165 Identities=17% Similarity=0.342 Sum_probs=138.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
+|...+.||+|+||.||+|+.. +|+.||||++..... ..+.|.+|++++.+++|||||+++++|.+ +...++||||+
T Consensus 11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~~ 89 (310)
T 3s95_A 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITEYI 89 (310)
T ss_dssp GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEECC
T ss_pred HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-CCeeEEEEEec
Confidence 4667789999999999999974 689999999855332 35689999999999999999999999986 46889999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.++++... ..++|.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 90 ~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 90 KGGTLRGIIKSMD-------SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp TTCBHHHHHHHCC-------TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred CCCcHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 9999999997632 3589999999999999999999998 89999999999999999999999999999873
Q ss_pred CCCcce-------------eeeeehhhhhhh
Q 035786 671 DSHQNV-------------LTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~-------------~~~~~~~~~y~a 688 (693)
...... ....+||+.|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 190 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190 (310)
T ss_dssp --------------------CCCCSCGGGCC
T ss_pred cccccccccccccccccccccccCCCcceeC
Confidence 322211 113567888876
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-27 Score=245.79 Aligned_cols=179 Identities=32% Similarity=0.543 Sum_probs=151.7
Q ss_pred CccCHHHHHHHhCCCCcc------CccccCCeeeEEEEEeCCCcEEEEEEecccc----cC-HHHHHHHHHHHhcCCCCC
Q 035786 500 DSFTYEQLLRATGNFSET------NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHS----FK-KESYMMELDLFSRVSHAR 568 (693)
Q Consensus 500 ~~~~~~~l~~at~~~~~~------~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~----~~-~~~f~~Ei~~l~~l~H~n 568 (693)
..|++.++..++++|+.. +.||+|+||.||+|+. +++.||||++.... .. .+.|.+|++++.+++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999988 8999999999999987 58899999986432 11 467999999999999999
Q ss_pred ccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCC
Q 035786 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQAS 648 (693)
Q Consensus 569 iv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~ 648 (693)
|+++++++.+ ++..++||||+++|+|.+++..... ...++|..+..++.+++.||+|||.. +|+||||||+
T Consensus 92 i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~ 162 (307)
T 2nru_A 92 LVELLGFSSD-GDDLCLVYVYMPNGSLLDRLSCLDG-----TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSA 162 (307)
T ss_dssp BCCEEEEECS-SSSCEEEEECCTTCBHHHHHHTGGG-----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGG
T ss_pred eEEEEEEEec-CCceEEEEEecCCCcHHHHHHhccC-----CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHH
Confidence 9999999875 4678999999999999999974321 24599999999999999999999998 9999999999
Q ss_pred CeeeCCCCceEECCcccccccCCCCcc-eeeeeehhhhhhh
Q 035786 649 SILLDDKFEVRLGSLSELHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 649 NILld~~~~~ki~Dfgla~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
||++++++.+||+|||+++........ ......||+.|+|
T Consensus 163 Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~a 203 (307)
T 2nru_A 163 NILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMA 203 (307)
T ss_dssp GEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCC
T ss_pred HEEEcCCCcEEEeecccccccccccccccccccCCCcCcCC
Confidence 999999999999999999887543322 2233567777765
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.1e-28 Score=253.75 Aligned_cols=167 Identities=18% Similarity=0.286 Sum_probs=138.6
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCC---CeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHE---TEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~---~~~~lv~e 588 (693)
++|...++||+|+||.||+|+.. ++.||||++.........+.+|++++.+++|||||+++++|.+.. ...++|||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e 102 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA 102 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence 45777889999999999999886 789999999765555556778999999999999999999987532 23689999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-------CCCeEecCCCCCCeeeCCCCceEEC
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC-------NPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~-------~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
|+++|+|.++++. ..++|..+..|+.|+++||+|||+.+ .++|+||||||+|||+++++.+||+
T Consensus 103 ~~~~g~L~~~l~~---------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 103 FHEKGSLSDFLKA---------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp CCTTCBHHHHHHH---------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred cCCCCCHHHHHHh---------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 9999999999975 24899999999999999999999862 4589999999999999999999999
Q ss_pred CcccccccCCCCcc-eeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
|||+++........ ..+...||+.|+|
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~a 201 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMA 201 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCC
T ss_pred cCCcccccccccCccccccCccCccccC
Confidence 99999886432221 1223456777765
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5e-27 Score=244.76 Aligned_cols=163 Identities=20% Similarity=0.321 Sum_probs=141.1
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.|...+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++.+++|||||++++++.. ++..++||||
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~ 98 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEY 98 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-CCEEEEEEEC
Confidence 4588889999999999999985 5789999999865443 36679999999999999999999999876 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.+++... .+++.+...++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 99 ~~~~~L~~~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (297)
T 3fxz_A 99 LAGGSLTDVVTET---------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (297)
T ss_dssp CTTCBHHHHHHHS---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred CCCCCHHHHHhhc---------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999999999752 489999999999999999999998 9999999999999999999999999999887
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
...... ....+||+.|+|
T Consensus 167 ~~~~~~-~~~~~gt~~y~a 184 (297)
T 3fxz_A 167 TPEQSK-RSTMVGTPYWMA 184 (297)
T ss_dssp CSTTCC-BCCCCSCGGGCC
T ss_pred CCcccc-cCCccCCcCccC
Confidence 443332 334568888876
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-27 Score=249.25 Aligned_cols=169 Identities=21% Similarity=0.325 Sum_probs=138.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCC-------
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHET------- 581 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~------- 581 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.|.+|++++++++|||||+++++|.+.+.
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 45777889999999999999975 7999999999754332 5689999999999999999999999865322
Q ss_pred -------------------------------------------------eeEEEEccCCCCChhhhhhccCCCCCCCCCC
Q 035786 582 -------------------------------------------------EKLLVYKYMVCGDLASSLHRVTDLEDDSLQS 612 (693)
Q Consensus 582 -------------------------------------------------~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~ 612 (693)
..++||||+++|+|.+++..... ...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-----~~~ 160 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-----LED 160 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-----GGG
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-----ccc
Confidence 26899999999999999986432 234
Q ss_pred CCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCCCc-----------ceeeeee
Q 035786 613 LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQ-----------NVLTRFL 681 (693)
Q Consensus 613 l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~~~-----------~~~~~~~ 681 (693)
.+|..+.+++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ...+...
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 68888999999999999999998 999999999999999999999999999998744321 1123356
Q ss_pred hhhhhhh
Q 035786 682 WRQLYQS 688 (693)
Q Consensus 682 ~~~~y~a 688 (693)
||+.|+|
T Consensus 238 gt~~y~a 244 (332)
T 3qd2_B 238 GTKLYMS 244 (332)
T ss_dssp -CGGGSC
T ss_pred CCcCccC
Confidence 7888875
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-27 Score=264.64 Aligned_cols=149 Identities=18% Similarity=0.331 Sum_probs=134.5
Q ss_pred hCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
.++|...+.||+|+||.||+|++.++..||||++.......++|.+|+++|++++|||||+++++|. ++..++|||||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~--~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT--KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe--CCccEEEEeec
Confidence 4457778899999999999999988999999999876666788999999999999999999999885 35789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.++++.... ..+++.++.+++.+||.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 265 ~~g~L~~~l~~~~~------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 265 AKGSLLDFLKSDEG------SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp TTCBHHHHHHSHHH------HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred CCCcHHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 99999999975321 2488999999999999999999998 89999999999999999999999999999864
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-27 Score=243.64 Aligned_cols=147 Identities=23% Similarity=0.395 Sum_probs=133.8
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|+..+++.||||++.......++|.+|++++.+++||||+++++++.+ +...++||||+++
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEH 89 (269)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEEECCTT
T ss_pred hceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCceEEEEEeCCC
Confidence 466778999999999999999889999999998776667889999999999999999999999875 4678999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|+|.++++... ..+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~~L~~~l~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 157 (269)
T 4hcu_A 90 GCLSDYLRTQR-------GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL 157 (269)
T ss_dssp CBHHHHHHTTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred CcHHHHHHhcC-------cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccc
Confidence 99999997532 3589999999999999999999998 89999999999999999999999999998763
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-28 Score=258.12 Aligned_cols=265 Identities=20% Similarity=0.190 Sum_probs=202.2
Q ss_pred CCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEcc
Q 035786 95 LSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLS 174 (693)
Q Consensus 95 L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 174 (693)
++..+++.+.+...+ ..+...+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..| +..+++|++|+|+
T Consensus 12 l~i~~ls~~~l~~~~-~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 12 YKIEKVTDSSLKQAL-ASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEESCCTTTHHHHH-HHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred eeEeeccccchhhhH-HHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 344455555554332 3333457789999999999998878889999999999999999987655 8889999999999
Q ss_pred CCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccC
Q 035786 175 RNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSL 254 (693)
Q Consensus 175 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 254 (693)
+|.+++. | ..++|++|++++|.+++..+. .+++|+.|++++|++++..|..++.+++|++|++++|.+++..
T Consensus 89 ~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQEL-L----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEE-E----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCccccc-c----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 9988743 2 347899999999999876544 3678999999999999888888888999999999999999877
Q ss_pred chhh-hcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcC
Q 035786 255 PLEL-RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTN 333 (693)
Q Consensus 255 p~~~-~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~ 333 (693)
|..+ ..+++|++|+|++|.+++. +.. ..+++|+.|++++|++++. |..+..+++|+.|+|++|+|+ .+|. .+.
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~~~--~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~-~~~ 234 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-KGQ--VVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEK-ALR 234 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-ECC--CCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECT-TCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-ccc--cccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhh-Hhh
Confidence 7776 4788999999999998865 332 3478899999999999865 445888899999999999998 4664 356
Q ss_pred CCCCCcEEEccCCccc-eecCC--CCCCCCCEEEcc-CCcceeecCC
Q 035786 334 GNASGAVFNISNNMLY-GDLNS--SSFRKFSLIDLS-SNYFQGTVAD 376 (693)
Q Consensus 334 ~~~~l~~l~ls~N~l~-g~~~~--~~~~~l~~ldLs-~N~l~g~ip~ 376 (693)
.++.|+.|++++|.+. +.+|. ..+++|+.++++ .+.++|..|.
T Consensus 235 ~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp CCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 6778888888888887 33332 345566667776 3455665443
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=5.1e-27 Score=249.01 Aligned_cols=164 Identities=17% Similarity=0.189 Sum_probs=140.4
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccc----ccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLH----SFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~----~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...++||+|+||+||+|+.. +|+.||||.+... ....+.+.+|++++.+++|||||++++++.+ ++..++|
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~~~lv 83 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-CCEEEEE
Confidence 45777889999999999999974 6899999999653 2235678999999999999999999998875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... .+++.+...++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 84 ~E~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a 152 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER--------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLC 152 (337)
T ss_dssp EECCTTCBHHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EeCCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccch
Confidence 99999999999997532 489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....+||+.|+|
T Consensus 153 ~~~~~~~~-~~~~~~gt~~y~a 173 (337)
T 1o6l_A 153 KEGISDGA-TMKTFCGTPEYLA 173 (337)
T ss_dssp BCSCCTTC-CBCCCEECGGGCC
T ss_pred hhcccCCC-cccccccChhhCC
Confidence 87532222 1344678888886
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-27 Score=265.16 Aligned_cols=150 Identities=21% Similarity=0.415 Sum_probs=135.1
Q ss_pred CCCCccCccccCCeeeEEEEEeCC-CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
.+|...+.||+|+||.||+|++.. +..||||++.......++|.+|+++|++++|||||+++++|.+ +...++|||||
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEec-CCcEEEEEEcc
Confidence 456778899999999999999864 8899999998766667889999999999999999999999975 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.++++.... ..+++..+..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 299 ~~g~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 299 TYGNLLDYLRECNR------QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp TTCBHHHHHHHSCT------TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred CCCCHHHHHHhcCc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999976432 3589999999999999999999998 99999999999999999999999999999874
Q ss_pred C
Q 035786 671 D 671 (693)
Q Consensus 671 ~ 671 (693)
.
T Consensus 370 ~ 370 (495)
T 1opk_A 370 G 370 (495)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.1e-27 Score=240.48 Aligned_cols=166 Identities=20% Similarity=0.321 Sum_probs=141.1
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|+..++..||||++.......+++.+|++++.+++||||++++++|.+ +...++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK-EYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCceEEEEEccC
Confidence 3467778999999999999999988899999998776677889999999999999999999998864 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++.... ..+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 87 ~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 87 NGCLLNYLRSHG-------KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp TCBHHHHHHHHG-------GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred CCcHHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 999999997532 3489999999999999999999998 999999999999999999999999999998744
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
..........+++.|+|
T Consensus 157 ~~~~~~~~~~~~~~y~a 173 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSA 173 (268)
T ss_dssp TCEEECCSCCCCGGGCC
T ss_pred hhhhcccCCCcCcccCC
Confidence 33222222334444543
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-26 Score=233.47 Aligned_cols=213 Identities=28% Similarity=0.353 Sum_probs=141.8
Q ss_pred CCCCcceeec-CCCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCC
Q 035786 51 CRSWRGVQCQ-NGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCS 129 (693)
Q Consensus 51 C~~W~gv~C~-~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~ 129 (693)
||.|.|+.|+ .+.++.+++++ +.+. .+|..+ .++|++|+|++|.
T Consensus 4 ~C~~~~~~C~c~~~~~~l~~~~-------------------------------~~l~-~ip~~~---~~~l~~L~l~~n~ 48 (270)
T 2o6q_A 4 LCKKDGGVCSCNNNKNSVDCSS-------------------------------KKLT-AIPSNI---PADTKKLDLQSNK 48 (270)
T ss_dssp CBGGGTCSBEEETTTTEEECTT-------------------------------SCCS-SCCSCC---CTTCSEEECCSSC
T ss_pred cCCCCCCCCEeCCCCCEEEccC-------------------------------CCCC-ccCCCC---CCCCCEEECcCCC
Confidence 4589999995 33444555544 3333 245433 3568888888888
Q ss_pred CCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCccc
Q 035786 130 LSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSG 209 (693)
Q Consensus 130 l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 209 (693)
+++..+..|+++++|++|+|++|.++...+..|.++++|++|+|++|.+++..+..+..+++|++|++++|.+++..|..
T Consensus 49 l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 128 (270)
T 2o6q_A 49 LSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRV 128 (270)
T ss_dssp CSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTT
T ss_pred CCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHH
Confidence 88776778888888888888888888665666778888888888888887666666777777777777777777666666
Q ss_pred ccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCC
Q 035786 210 LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQL 289 (693)
Q Consensus 210 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L 289 (693)
+..+++|++|+|++|++++..+..|..+++|++|++++|++++..+..|.++++|++|+|++|++++ ++...|..+++|
T Consensus 129 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L 207 (270)
T 2o6q_A 129 FDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR-VPEGAFDSLEKL 207 (270)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTC
T ss_pred hCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc-CCHHHhccccCC
Confidence 7777777777777777776555556777777777777777765555445555555555555555542 333333444444
Q ss_pred CEEEccCCcC
Q 035786 290 QVVDLSGNKL 299 (693)
Q Consensus 290 ~~L~Ls~N~l 299 (693)
+.|++++|.+
T Consensus 208 ~~L~l~~N~~ 217 (270)
T 2o6q_A 208 KMLQLQENPW 217 (270)
T ss_dssp CEEECCSSCB
T ss_pred CEEEecCCCe
Confidence 4444444444
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=245.04 Aligned_cols=164 Identities=12% Similarity=0.192 Sum_probs=142.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
++|...+.||+|+||.||+|+.. +|+.||+|.+.......+.+.+|++++..++|||||++++++.+ ++..++||||+
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e~~ 83 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES-MEELVMIFEFI 83 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-TTEEEEEECCC
T ss_pred hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEec-CCEEEEEEEeC
Confidence 45777889999999999999974 68999999997655556678999999999999999999999875 46899999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC--CCceEECCcccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD--KFEVRLGSLSELHA 668 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~--~~~~ki~Dfgla~~ 668 (693)
++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.
T Consensus 84 ~g~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 84 SGLDIFERINTSA-------FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp CCCBHHHHHTSSS-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred CCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 9999999996432 3589999999999999999999998 9999999999999997 78999999999998
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
...... ....+||++|+|
T Consensus 154 ~~~~~~--~~~~~gt~~y~a 171 (321)
T 1tki_A 154 LKPGDN--FRLLFTAPEYYA 171 (321)
T ss_dssp CCTTCE--EEEEESCGGGSC
T ss_pred CCCCCc--cccccCChhhcC
Confidence 754332 455778888876
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-27 Score=253.50 Aligned_cols=169 Identities=12% Similarity=0.153 Sum_probs=139.3
Q ss_pred hCCCCccCccccCCeeeEEEEE------eCCCcEEEEEEecccccCHHHHHHHHHHHhcCC---CCCccceeEEEEcCCC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGT------LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVS---HARLVPLLGQCLEHET 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~------~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~---H~niv~l~g~~~~~~~ 581 (693)
.+.|...+.||+|+||.||+|+ ..+++.||||++... ..++|.+|++++.+++ |+||+++++++.. ++
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~-~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF-QN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-SS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec-CC
Confidence 3557778899999999999994 456889999998643 3567888999988887 9999999999876 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-------
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD------- 654 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~------- 654 (693)
..++|||||++|+|.++++..... ....++|..+..|+.|+++||+|||+. +||||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNT---PEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTS---TTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred CcEEEEeccCCCcHHHHHHHhhcc---cccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 789999999999999999753211 124599999999999999999999998 8999999999999998
Q ss_pred ----CCceEECCcccccccCC-CCcceeeeeehhhhhhh
Q 035786 655 ----KFEVRLGSLSELHAQGD-SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 655 ----~~~~ki~Dfgla~~~~~-~~~~~~~~~~~~~~y~a 688 (693)
++.+||+|||+++.... ......+..+||++|||
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~a 253 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQC 253 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCC
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCC
Confidence 89999999999987532 22223455678888876
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.1e-27 Score=246.06 Aligned_cols=148 Identities=20% Similarity=0.376 Sum_probs=129.0
Q ss_pred CCCccCccccCCeeeEEEEEeC----CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA----GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~----~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
.|...+.||+|+||.||+|+.. .+..||||++..... ..++|.+|++++.+++|||||+++++|.+ ++..++|
T Consensus 50 ~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 128 (325)
T 3kul_A 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR-GRLAMIV 128 (325)
T ss_dssp GEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG-GGCCEEE
T ss_pred HeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCccEEE
Confidence 3556689999999999999974 345699999975432 25679999999999999999999999865 4578999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++... ..+++.++..|+.+++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 129 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 198 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHD-------GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLS 198 (325)
T ss_dssp EECCTTCBHHHHHHTTT-------TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred eeCCCCCcHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcc
Confidence 99999999999997532 3589999999999999999999998 9999999999999999999999999999
Q ss_pred cccCC
Q 035786 667 HAQGD 671 (693)
Q Consensus 667 ~~~~~ 671 (693)
+....
T Consensus 199 ~~~~~ 203 (325)
T 3kul_A 199 RVLED 203 (325)
T ss_dssp EECC-
T ss_pred ccccc
Confidence 98743
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-27 Score=254.17 Aligned_cols=149 Identities=22% Similarity=0.393 Sum_probs=124.8
Q ss_pred CCCCccCccccCCeeeEEEEEeC----CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA----GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~----~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.+|...+.||+|+||.||+|+.. ++..||||++..... ..++|.+|++++++++|||||+++++|.+ +...++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~l 123 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMI 123 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSCEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCceEE
Confidence 35788899999999999999864 477899999975432 25679999999999999999999999875 467899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..++|.++..|+.|+++||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 124 v~e~~~~~sL~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 193 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGL 193 (373)
T ss_dssp EEECCTTCBHHHHHHTTT-------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--
T ss_pred EEeCCCCCcHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcc
Confidence 999999999999997532 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCC
Q 035786 666 LHAQGD 671 (693)
Q Consensus 666 a~~~~~ 671 (693)
++....
T Consensus 194 a~~~~~ 199 (373)
T 2qol_A 194 GRVLED 199 (373)
T ss_dssp ------
T ss_pred cccccc
Confidence 998743
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-26 Score=258.80 Aligned_cols=283 Identities=25% Similarity=0.292 Sum_probs=227.9
Q ss_pred CCCCCCCCCCCCCcceee--------cCCCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHh
Q 035786 42 RDWPLRTEPCRSWRGVQC--------QNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWF 113 (693)
Q Consensus 42 ~~W~~~~~~C~~W~gv~C--------~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~ 113 (693)
++|.... +||.|+|..| ....++.+++++... ..+|.. +. ++|+.|++++|.+. .+|.
T Consensus 13 ~~W~~~~-~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L---~~lp~~-----l~--~~L~~L~L~~N~l~-~lp~-- 78 (622)
T 3g06_A 13 SAWRRAA-PAEESRGRAAVVQKMRACLNNGNAVLNVGESGL---TTLPDC-----LP--AHITTLVIPDNNLT-SLPA-- 78 (622)
T ss_dssp HHHHHTC-CGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCC---SCCCSC-----CC--TTCSEEEECSCCCS-CCCC--
T ss_pred HHHHhcC-CcchhccccccCcccccccCCCCcEEEecCCCc---CccChh-----hC--CCCcEEEecCCCCC-CCCC--
Confidence 3575434 4668977533 234688999987653 245542 22 78999999999988 6776
Q ss_pred hhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCC
Q 035786 114 GYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLT 193 (693)
Q Consensus 114 ~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 193 (693)
.+++|++|+|++|.+++ +|. .+++|++|+|++|.+++ +|. .+++|++|++++|++++ +|.. +++|+
T Consensus 79 --~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~ 144 (622)
T 3g06_A 79 --LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQ 144 (622)
T ss_dssp --CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCC
T ss_pred --cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCC
Confidence 38999999999999984 665 68999999999999986 454 67899999999999985 6654 48999
Q ss_pred eeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccc
Q 035786 194 RLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENG 273 (693)
Q Consensus 194 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 273 (693)
+|++++|.+++ +|. .+++|+.|++++|++++ +| ..+++|+.|++++|.+++ +|. .+++|+.|++++|.
T Consensus 145 ~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~ 212 (622)
T 3g06_A 145 ELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWAYNNR 212 (622)
T ss_dssp EEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred EEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEECcCCc
Confidence 99999999985 554 35789999999999996 56 457899999999999996 444 35789999999999
Q ss_pred ccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecC
Q 035786 274 LEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 274 l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~ 353 (693)
++ .+|. .+++|+.|++++|++++ +| ..+++|+.|+|++|+|+ .+|. .+.+|+.|+|++|+++ .+|
T Consensus 213 l~-~l~~----~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~----~~~~L~~L~Ls~N~L~-~lp 277 (622)
T 3g06_A 213 LT-SLPA----LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM----LPSGLLSLSVYRNQLT-RLP 277 (622)
T ss_dssp CS-SCCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCC-SCC
T ss_pred cc-ccCC----CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc----ccccCcEEeCCCCCCC-cCC
Confidence 98 4553 34789999999999997 55 45689999999999998 5774 5678999999999999 666
Q ss_pred C--CCCCCCCEEEccCCcceeecCCCcC
Q 035786 354 S--SSFRKFSLIDLSSNYFQGTVADDRG 379 (693)
Q Consensus 354 ~--~~~~~l~~ldLs~N~l~g~ip~~~~ 379 (693)
. ..+++|+.|+|++|+++|.+|..+.
T Consensus 278 ~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 278 ESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp GGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred HHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 5 5678999999999999998887543
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-27 Score=250.27 Aligned_cols=165 Identities=19% Similarity=0.231 Sum_probs=136.5
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 584 (693)
.++|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++..+ +|||||++++++.+ ++..+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~~ 100 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT-PDRLF 100 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe-CCEEE
Confidence 356888899999999999999964 68999999997532 2346788999999988 69999999998865 46889
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+||||+++|+|.++++... .+++.+...++.+++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 101 lv~E~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG 169 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR--------RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFG 169 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEeCCCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEcccc
Confidence 9999999999999997642 489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... .....+||++|+|
T Consensus 170 ~a~~~~~~~~-~~~~~~gt~~y~a 192 (353)
T 3txo_A 170 MCKEGICNGV-TTATFCGTPDYIA 192 (353)
T ss_dssp TCBCSCC----------CCGGGCC
T ss_pred ceeecccCCc-cccccCCCcCeEC
Confidence 9987532222 2344678999886
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-27 Score=252.18 Aligned_cols=155 Identities=16% Similarity=0.309 Sum_probs=131.0
Q ss_pred CCCCccCccccCCeeeEEEEEe--------CCCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL--------AGGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHE 580 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~--------~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~ 580 (693)
++|...+.||+|+||.||+|+. .++..||||++...... .++|.+|++++.++ +|||||+++++|.+ +
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~-~ 159 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-D 159 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS-S
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc-C
Confidence 4567778999999999999985 23567999999754322 46799999999999 89999999999875 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
+..++||||+++|+|.++++...... ......++|.++..++.||++||+|||+. +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 67899999999999999998643210 01124589999999999999999999998 99999999999999
Q ss_pred CCCCceEECCcccccccC
Q 035786 653 DDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~~ 670 (693)
++++.+||+|||+++...
T Consensus 237 ~~~~~~kl~DFG~a~~~~ 254 (370)
T 2psq_A 237 TENNVMKIADFGLARDIN 254 (370)
T ss_dssp CTTCCEEECCCSSCEETT
T ss_pred CCCCCEEEccccCCcccC
Confidence 999999999999999764
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.5e-27 Score=246.96 Aligned_cols=165 Identities=17% Similarity=0.255 Sum_probs=138.2
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+.. +++.||||++...... .+.+.+|++++.+++|||||++++++.+ ++..++|||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e 85 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFLE 85 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEEEEE
Confidence 45777889999999999999975 7899999998654322 4678999999999999999999999875 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++.. ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 86 ~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 154 (323)
T 3tki_A 86 YCSGGELFDRIEPD--------IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATV 154 (323)
T ss_dssp CCTTEEGGGGSBTT--------TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred cCCCCcHHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccce
Confidence 99999999998643 2489999999999999999999998 999999999999999999999999999987
Q ss_pred cCCC-Ccceeeeeehhhhhhh
Q 035786 669 QGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~-~~~~~~~~~~~~~y~a 688 (693)
.... ........+||+.|+|
T Consensus 155 ~~~~~~~~~~~~~~gt~~y~a 175 (323)
T 3tki_A 155 FRYNNRERLLNKMCGTLPYVA 175 (323)
T ss_dssp CEETTEECCBCSCCSCGGGSC
T ss_pred eccCCcccccCCCccCcCccC
Confidence 6322 2222344678888876
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-27 Score=265.01 Aligned_cols=217 Identities=22% Similarity=0.201 Sum_probs=172.4
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 3479999999999988888889999999999999999887665 8889999999999998875432 37889999
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhh-cCcccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELR-GLRNLAKLVISENGLE 275 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~ 275 (693)
+++|.+++..+. .+++|+.|+|++|.+++..|..++.+++|++|+|++|.+++.+|..+. .+++|++|+|++|.++
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 999988876554 457888999999999888888888888999999999999888887775 7888888888888888
Q ss_pred ccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccc
Q 035786 276 GQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLY 349 (693)
Q Consensus 276 g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~ 349 (693)
+..+ ...+++|+.|+|++|.+++.+| .+..+++|+.|+|++|+|++ +|. .+..++.|+.|++++|.+.
T Consensus 183 ~~~~---~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~-~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 183 DVKG---QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEK-ALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp EEEC---CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECT-TCCCCTTCCEEECTTCCBC
T ss_pred cccc---cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cch-hhccCCCCCEEEcCCCCCc
Confidence 6532 2357888888888888887544 47788888888888888885 553 2445566666666666665
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.2e-26 Score=233.28 Aligned_cols=206 Identities=25% Similarity=0.224 Sum_probs=154.5
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..+..+++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46889999999998877778889999999999999998777778888999999999999998877788888999999999
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCccccc-CCccccCCCCCCEEEccCCcCcccCchhhhcCcccc----ccccccc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGF-IPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLA----KLVISEN 272 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~----~L~Ls~N 272 (693)
++|.+++..+..+..+++|++|++++|++++. +|..++++++|++|++++|++++..+..+..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99988877666788889999999999998874 688888899999999999999887777777776666 5556666
Q ss_pred cccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcc
Q 035786 273 GLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG 325 (693)
Q Consensus 273 ~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g 325 (693)
.+++. +...+.. .+|+.|++++|++++..+..+..+++|+.|+|++|.+++
T Consensus 188 ~l~~~-~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 188 PMNFI-QPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCCEE-CTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred ccccc-CccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 65532 2222222 245555555555554444444444555555555554443
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-27 Score=261.24 Aligned_cols=149 Identities=23% Similarity=0.392 Sum_probs=131.5
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|+..++..||||++.......++|.+|+++|++++|||||+++++|.+ +..++|||||+
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC--CceEEEehhhc
Confidence 4567788999999999999999888899999998766667889999999999999999999998864 56899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.++++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...+
T Consensus 262 ~gsL~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 262 KGSLLDFLKGETG------KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp TCBHHHHHSHHHH------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred CCCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 9999999974321 3489999999999999999999998 999999999999999999999999999998743
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.6e-27 Score=243.43 Aligned_cols=165 Identities=17% Similarity=0.225 Sum_probs=134.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. .+++.||||++...... .+.|.+|++++.+++|||||++++++.+ ++..++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv 89 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-DDCYYLV 89 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-SSEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-CCeEEEE
Confidence 3577788999999999999986 46899999998543322 3578999999999999999999998875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~e~~~g~~L~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 158 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG--------PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIA 158 (294)
T ss_dssp EECCCSCBHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSS
T ss_pred EeCCCCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCc
Confidence 99999999999997542 489999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+.............+||+.|+|
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~a 180 (294)
T 4eqm_A 159 KALSETSLTQTNHVLGTVQYFS 180 (294)
T ss_dssp TTC-------------CCSSCC
T ss_pred cccccccccccCccccCccccC
Confidence 9875443333344567777765
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-27 Score=252.91 Aligned_cols=164 Identities=19% Similarity=0.233 Sum_probs=139.3
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...++||+|+||+||+|+.. +++.||||++...... .+.+.+|.+++.++ +|||||++++++.+ ++..++
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~~l 130 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFF 130 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE-CCEEEE
Confidence 45778899999999999999975 5889999999754322 34688999999887 89999999998875 568999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... .+++.....++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 131 V~E~~~gg~L~~~l~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGl 199 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR--------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGM 199 (396)
T ss_dssp EEECCTTCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEcCCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecce
Confidence 999999999999997642 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... .....+||++|+|
T Consensus 200 a~~~~~~~~-~~~~~~gt~~Y~a 221 (396)
T 4dc2_A 200 CKEGLRPGD-TTSTFCGTPNYIA 221 (396)
T ss_dssp CBCCCCTTC-CBCCCCBCGGGCC
T ss_pred eeecccCCC-ccccccCCcccCC
Confidence 987422222 1344789999987
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.8e-27 Score=247.94 Aligned_cols=166 Identities=19% Similarity=0.265 Sum_probs=140.6
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCee
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~ 583 (693)
..++|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|.+++..+ +|||||++++++.+ ++..
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~-~~~~ 93 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT-KENL 93 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe-CCEE
Confidence 3456888899999999999999975 68999999997532 2356788899999887 99999999998875 4689
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++||||+++|+|.+++.... .+++.+...++.+++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DF 162 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH--------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADF 162 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEeCCCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEC
Confidence 99999999999999997532 489999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+++....... .....+||++|+|
T Consensus 163 G~a~~~~~~~~-~~~~~~gt~~y~a 186 (345)
T 1xjd_A 163 GMCKENMLGDA-KTNTFCGTPDYIA 186 (345)
T ss_dssp TTCBCCCCTTC-CBCCCCSCGGGCC
T ss_pred hhhhhcccCCC-cccCCCCCcccCC
Confidence 99987532221 1344678888876
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-27 Score=253.28 Aligned_cols=184 Identities=17% Similarity=0.218 Sum_probs=145.7
Q ss_pred cCHHHHHHHhCCCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccce
Q 035786 502 FTYEQLLRATGNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPL 572 (693)
Q Consensus 502 ~~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l 572 (693)
+...++....++|...+.||+|+||.||+|++ .+++.||||++...... .+.|.+|++++.++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 44455555667788899999999999999974 34689999999754332 45799999999999 89999999
Q ss_pred eEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCC---------------------------------------------
Q 035786 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLED--------------------------------------------- 607 (693)
Q Consensus 573 ~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~--------------------------------------------- 607 (693)
+++|.+.+...++||||+++|+|.++++.......
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99998755568999999999999999986432100
Q ss_pred -------------CCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCC-C
Q 035786 608 -------------DSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDS-H 673 (693)
Q Consensus 608 -------------~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~-~ 673 (693)
.....+++..+..++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++..... .
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 0012389999999999999999999998 9999999999999999999999999999976332 2
Q ss_pred cceeeeeehhhhhhh
Q 035786 674 QNVLTRFLWRQLYQS 688 (693)
Q Consensus 674 ~~~~~~~~~~~~y~a 688 (693)
....+...+|+.|+|
T Consensus 249 ~~~~~~~~~t~~y~a 263 (359)
T 3vhe_A 249 YVRKGDARLPLKWMA 263 (359)
T ss_dssp CEEC--CEECGGGCC
T ss_pred chhccccCCCceeEC
Confidence 222344556667765
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.8e-27 Score=251.18 Aligned_cols=162 Identities=20% Similarity=0.258 Sum_probs=140.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+|... +|+.||||.+.... ...+.+.+|++++.+++|||||+++++|.+ +...++||
T Consensus 16 ~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~~~~lv~ 94 (384)
T 4fr4_A 16 HFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD-EEDMFMVV 94 (384)
T ss_dssp GEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEEE
Confidence 4777889999999999999964 58899999986432 235678999999999999999999998875 46899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 95 e~~~gg~L~~~l~~~--------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~ 163 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN--------VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAA 163 (384)
T ss_dssp CCCTTEEHHHHHHTT--------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ecCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceee
Confidence 999999999999753 2489999999999999999999998 99999999999999999999999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... .+..+||++|+|
T Consensus 164 ~~~~~~~--~~~~~gt~~Y~a 182 (384)
T 4fr4_A 164 MLPRETQ--ITTMAGTKPYMA 182 (384)
T ss_dssp ECCTTCC--BCCCCSCGGGCC
T ss_pred eccCCCc--eeccCCCccccC
Confidence 8744332 345678888887
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-27 Score=241.85 Aligned_cols=148 Identities=21% Similarity=0.362 Sum_probs=131.5
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|+..++..||||++.......++|.+|++++.+++||||++++++|.+ ++..++||||++
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 102 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYMA 102 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEECCCT
T ss_pred HHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEec-CCCeEEEEeccC
Confidence 3467778999999999999999988999999998776677889999999999999999999998865 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 103 ~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 103 NGCLLNYLREMR-------HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp TCBHHHHHHCGG-------GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred CCcHHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 999999997532 3489999999999999999999998 99999999999999999999999999998763
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=241.21 Aligned_cols=164 Identities=16% Similarity=0.247 Sum_probs=135.2
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---------------------------CHHHHHHHHHHHhc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---------------------------KKESYMMELDLFSR 563 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---------------------------~~~~f~~Ei~~l~~ 563 (693)
++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.|.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 4577788999999999999986 4689999999865321 12468999999999
Q ss_pred CCCCCccceeEEEEcC-CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEe
Q 035786 564 VSHARLVPLLGQCLEH-ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVH 642 (693)
Q Consensus 564 l~H~niv~l~g~~~~~-~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiH 642 (693)
++|||||++++++.+. +...++||||+++|+|.+++.. ..+++.+...++.|+++||+|||+. +|+|
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH 160 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---------KPLSEDQARFYFQDLIKGIEYLHYQ---KIIH 160 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---------SCCCHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---Ceec
Confidence 9999999999998753 3568999999999999886542 3599999999999999999999998 9999
Q ss_pred cCCCCCCeeeCCCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 643 RDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 643 rDlk~~NILld~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||||+||++++++.+||+|||+++....... ......||+.|+|
T Consensus 161 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~a 205 (298)
T 2zv2_A 161 RDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMA 205 (298)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCC
T ss_pred cCCCHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccC
Confidence 99999999999999999999999998754332 2334568888876
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=246.58 Aligned_cols=164 Identities=20% Similarity=0.234 Sum_probs=139.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.++ +|||||++++++.+ +...++
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~~l 87 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFF 87 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-CCEEEE
Confidence 34777889999999999999975 5899999999754322 35688999999988 89999999998875 468999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 88 v~e~~~gg~L~~~l~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~ 156 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR--------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGM 156 (345)
T ss_dssp EECCCCSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGG
T ss_pred EEeCCCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccc
Confidence 999999999999997532 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... .....+||++|+|
T Consensus 157 a~~~~~~~~-~~~~~~gt~~y~a 178 (345)
T 3a8x_A 157 CKEGLRPGD-TTSTFCGTPNYIA 178 (345)
T ss_dssp CBCSCCTTC-CBCCCCSCGGGCC
T ss_pred cccccCCCC-cccccCCCccccC
Confidence 987432222 1344678888876
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=241.97 Aligned_cols=165 Identities=23% Similarity=0.406 Sum_probs=133.4
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhc--CCCCCccceeEEEEcC---CCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSR--VSHARLVPLLGQCLEH---ETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~--l~H~niv~l~g~~~~~---~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. +|+.||||++... ..+.+.+|.+++.. ++||||+++++++.+. ....++|
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv 84 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI 84 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence 4577889999999999999998 5899999998643 34556677777766 7999999999987642 2347899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-----CCCeEecCCCCCCeeeCCCCceEEC
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC-----NPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~-----~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
|||+++|+|.++++. ..++|..+.+|+.+++.||+|||... ..+|+||||||+|||++.++.+||+
T Consensus 85 ~e~~~~g~L~~~l~~---------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 85 THYHEMGSLYDYLQL---------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp ECCCTTCBHHHHHTT---------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred hhhccCCCHHHHHhh---------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEe
Confidence 999999999999953 24899999999999999999999221 3399999999999999999999999
Q ss_pred CcccccccCCCCcce---eeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNV---LTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~---~~~~~~~~~y~a 688 (693)
|||+++......... .....||+.|+|
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a 185 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCC
T ss_pred eCCCeeecccccccccccccccccccceeC
Confidence 999998764332221 223467777765
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=243.33 Aligned_cols=161 Identities=19% Similarity=0.220 Sum_probs=139.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +|+.||||.+.... ...+.+.+|+.+++.++|||||++++++.+ +...++|
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~lv 84 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-AQQIFMI 84 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-SSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-CCEEEEE
Confidence 35777889999999999999974 68999999996532 235678899999999999999999998875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++.. ..+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 85 ~e~~~gg~L~~~l~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a 153 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS--------QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFA 153 (318)
T ss_dssp ECCCCSCBHHHHHHHT--------SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EeCCCCCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcc
Confidence 9999999999999753 2489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+...+.. ...+||+.|+|
T Consensus 154 ~~~~~~~----~~~~gt~~y~a 171 (318)
T 1fot_A 154 KYVPDVT----YTLCGTPDYIA 171 (318)
T ss_dssp EECSSCB----CCCCSCTTTCC
T ss_pred eecCCcc----ccccCCccccC
Confidence 9864432 23567888876
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=255.82 Aligned_cols=148 Identities=24% Similarity=0.405 Sum_probs=132.2
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|++. |+.||||+++... ..++|.+|+++|++++|||||+++++|.+.+...++|||||+
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~ 270 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 270 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCT
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecC
Confidence 45677789999999999999986 7899999997644 456799999999999999999999999875557899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|+|.++++.... ..+++.++..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 271 ~g~L~~~l~~~~~------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 271 KGSLVDYLRSRGR------SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp TCBHHHHHHHHCT------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCcHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 9999999986432 3479999999999999999999998 99999999999999999999999999998753
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=246.14 Aligned_cols=163 Identities=18% Similarity=0.234 Sum_probs=140.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
+.|...+.||+|+||.||+|+.. +|+.||||.+..... ..+.+.+|++++.+++|||||++++++.+ +...
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~ 90 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN-RTDV 90 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEE
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe-CCEE
Confidence 45777889999999999999974 689999999975432 24679999999999999999999998875 4688
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC----ceE
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF----EVR 659 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~----~~k 659 (693)
++||||+++|+|.+++... ..+++.....++.+|+.||+|||+. +|+||||||+|||+++++ .+|
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vk 159 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--------ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--------SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEE
T ss_pred EEEEEcCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEE
Confidence 9999999999999999643 3489999999999999999999998 999999999999998877 799
Q ss_pred ECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+|||+++....... ....+||++|+|
T Consensus 160 l~DFG~a~~~~~~~~--~~~~~gt~~y~a 186 (361)
T 2yab_A 160 LIDFGLAHEIEDGVE--FKNIFGTPEFVA 186 (361)
T ss_dssp ECCCSSCEECCTTCC--CCCCCSCGGGCC
T ss_pred EEecCCceEcCCCCc--cccCCCCccEEC
Confidence 999999998754332 344678888876
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=242.79 Aligned_cols=169 Identities=23% Similarity=0.426 Sum_probs=130.4
Q ss_pred hCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
..+|...+.||+|+||.||+|+. +|+.||||++...... .++|.+|++++.+++|||||++++++.+ +...++||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~ 113 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ-PPNLSIVT 113 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-TTCCEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCceEEEE
Confidence 34577788999999999999987 5889999998754433 3579999999999999999999999875 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++.... ...+++..+..++.|++.||+|||+. .++|+||||||+||++++++.+||+|||+++
T Consensus 114 e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGA-----REQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp ECCTTCBHHHHHHSTTH-----HHHSCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred ecCCCCcHHHHHhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 99999999999975321 12389999999999999999999987 2339999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
........ .....||+.|+|
T Consensus 188 ~~~~~~~~-~~~~~gt~~y~a 207 (309)
T 3p86_A 188 LKASTFLS-SKSAAGTPEWMA 207 (309)
T ss_dssp ---------------CCTTSC
T ss_pred cccccccc-cccCCCCccccC
Confidence 76433221 233556666665
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-26 Score=258.97 Aligned_cols=165 Identities=21% Similarity=0.239 Sum_probs=142.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++.+++|||||++++++.+ ++..++|
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~lV 262 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-KDALCLV 262 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-CCEEEEE
Confidence 45777889999999999999974 69999999996532 235678999999999999999999998875 4689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
||||++|+|.+++..... ..+++..+..++.+|+.||+|||+. +||||||||+|||+++++.+||+|||++
T Consensus 263 mEy~~gg~L~~~l~~~~~------~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla 333 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ------AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA 333 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEcCCCCcHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccc
Confidence 999999999999975321 3489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .+..+||++|+|
T Consensus 334 ~~~~~~~~--~~~~~GT~~Y~A 353 (576)
T 2acx_A 334 VHVPEGQT--IKGRVGTVGYMA 353 (576)
T ss_dssp EECCTTCC--EECCCSCGGGCC
T ss_pred eecccCcc--ccccCCCccccC
Confidence 98754432 344689999987
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-27 Score=252.47 Aligned_cols=148 Identities=24% Similarity=0.393 Sum_probs=130.8
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+.. +++.||||.+...... .++|.+|++++++++|||||+++|+|.+ ++..++|||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e 192 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-KQPIYIVME 192 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS-SSSCEEEEE
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec-CCCcEEEEE
Confidence 45677789999999999999985 7899999998754222 3578999999999999999999999975 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
||++|+|.++++... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 193 ~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~ 262 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG-------ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSRE 262 (377)
T ss_dssp CCTTCBHHHHHHHHG-------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred cCCCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCcee
Confidence 999999999997532 2489999999999999999999998 899999999999999999999999999987
Q ss_pred cC
Q 035786 669 QG 670 (693)
Q Consensus 669 ~~ 670 (693)
..
T Consensus 263 ~~ 264 (377)
T 3cbl_A 263 EA 264 (377)
T ss_dssp CT
T ss_pred cC
Confidence 64
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-26 Score=245.32 Aligned_cols=161 Identities=16% Similarity=0.184 Sum_probs=139.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +|+.||||.+.... ...+.+.+|++++.+++|||||++++++.+ +...++|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-NSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-CCEEEEE
Confidence 34777889999999999999974 68999999996532 235678999999999999999999998875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... .+++.+...++.+++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 120 ~e~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a 188 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG--------RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFA 188 (350)
T ss_dssp EECCTTCBHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EcCCCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccc
Confidence 99999999999997642 489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+...... ...+||+.|+|
T Consensus 189 ~~~~~~~----~~~~gt~~y~a 206 (350)
T 1rdq_E 189 KRVKGRT----WTLCGTPEALA 206 (350)
T ss_dssp EECSSCB----CCCEECGGGCC
T ss_pred eeccCCc----ccccCCccccC
Confidence 9874432 23578888876
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-26 Score=242.04 Aligned_cols=164 Identities=19% Similarity=0.308 Sum_probs=135.3
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+..+|+.||||++...... .+.+.+|++++.+++|||||++++++.+ +...++|||
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e 99 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-ERCLTLVFE 99 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-SSCEEEEEE
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-CCEEEEEEc
Confidence 457778899999999999999988999999999654322 4678999999999999999999998865 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|++ |+|.+++.... ..+++.+...++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 100 ~~~-~~l~~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 168 (311)
T 3niz_A 100 FME-KDLKKVLDENK-------TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARA 168 (311)
T ss_dssp CCS-EEHHHHHHTCT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred CCC-CCHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCcee
Confidence 998 58888886532 3489999999999999999999998 999999999999999999999999999998
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
.+..... .+..++|++|+|
T Consensus 169 ~~~~~~~-~~~~~~t~~y~a 187 (311)
T 3niz_A 169 FGIPVRS-YTHEVVTLWYRA 187 (311)
T ss_dssp TTSCCC----CCCCCCTTCC
T ss_pred cCCCccc-ccCCcccCCcCC
Confidence 7433221 333456777765
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-26 Score=256.10 Aligned_cols=147 Identities=16% Similarity=0.272 Sum_probs=119.8
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC----Cee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE----TEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~ 583 (693)
++|...+.||+|+||.||+|... +|+.||||++...... .+.+.+|++++.+++|||||+++++|.... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 45788899999999999999864 6899999999653322 467899999999999999999999885432 458
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
|+||||+. |+|.++++.. ..+++.....|+.||+.||+|||+. +||||||||+|||+++++.+||+||
T Consensus 133 ~lv~e~~~-~~L~~~~~~~--------~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DF 200 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTP--------VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDF 200 (458)
T ss_dssp EEEECCCS-EEHHHHHHSS--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEeccc-cchhhhcccC--------CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeeccc
Confidence 99999985 7999998743 3499999999999999999999998 9999999999999999999999999
Q ss_pred ccccccC
Q 035786 664 SELHAQG 670 (693)
Q Consensus 664 gla~~~~ 670 (693)
|+++...
T Consensus 201 Gla~~~~ 207 (458)
T 3rp9_A 201 GLARTVD 207 (458)
T ss_dssp TTCBCTT
T ss_pred ccchhcc
Confidence 9999874
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.6e-27 Score=246.21 Aligned_cols=245 Identities=23% Similarity=0.216 Sum_probs=208.8
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecc
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 198 (693)
.++.++++.+.+...++..+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 46667788888766666667788899999999999999888999999999999999999997665 8999999999999
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccC
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
+|.+++. | ..++|+.|++++|++++..+.. +++|++|++++|++++..|..+..+++|++|++++|.+++..
T Consensus 89 ~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQEL-L----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEE-E----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCccccc-c----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 9999853 2 3489999999999999866543 678999999999999988889999999999999999999877
Q ss_pred CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CC
Q 035786 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SS 356 (693)
Q Consensus 279 ~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~ 356 (693)
+..++..+++|++|++++|++++. |. ...+++|++|+|++|++++..| . +..++.|+.|++++|++++ +|. ..
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~-~-~~~l~~L~~L~L~~N~l~~-l~~~~~~ 235 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP-E-FQSAAGVTWISLRNNKLVL-IEKALRF 235 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG-G-GGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchh-h-hcccCcccEEECcCCcccc-hhhHhhc
Confidence 766656789999999999999976 33 3358999999999999996444 3 6678999999999999995 454 56
Q ss_pred CCCCCEEEccCCcce-eecCCCc
Q 035786 357 FRKFSLIDLSSNYFQ-GTVADDR 378 (693)
Q Consensus 357 ~~~l~~ldLs~N~l~-g~ip~~~ 378 (693)
+++|+.|++++|.++ +.+|..+
T Consensus 236 l~~L~~L~l~~N~~~~~~~~~~~ 258 (317)
T 3o53_A 236 SQNLEHFDLRGNGFHCGTLRDFF 258 (317)
T ss_dssp CTTCCEEECTTCCCBHHHHHHHH
T ss_pred CCCCCEEEccCCCccCcCHHHHH
Confidence 789999999999998 5555443
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-27 Score=263.79 Aligned_cols=236 Identities=21% Similarity=0.152 Sum_probs=201.8
Q ss_pred cCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCE
Q 035786 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSN 170 (693)
Q Consensus 91 ~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 170 (693)
..++|+.|++++|.+.+..|..+. .+++|++|+|++|.+++.+| |+.+++|++|+|++|.+++..+ .++|++
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLA-PFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGT-TCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHh-CCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 445899999999999998888886 59999999999999998766 9999999999999999986433 389999
Q ss_pred EEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCcccc-CCCCCCEEEccCCc
Q 035786 171 LDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG-NLDKLIELDLSKNS 249 (693)
Q Consensus 171 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~ 249 (693)
|++++|.+++..+. .+++|+.|+|++|.+++..|..++.+++|+.|+|++|.+++.+|..+. .+++|++|+|++|.
T Consensus 104 L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 99999999987664 468899999999999999899999999999999999999998888886 79999999999999
Q ss_pred CcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCc-ccCC
Q 035786 250 ISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT-GSWP 328 (693)
Q Consensus 250 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~-g~~p 328 (693)
+++..+ ...+++|+.|+|++|.+++..| . |..+++|+.|++++|.+++ +|..+..+++|+.|++++|.++ +.+|
T Consensus 181 l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 181 IYDVKG--QVVFAKLKTLDLSSNKLAFMGP-E-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp CCEEEC--CCCCTTCCEEECCSSCCCEECG-G-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred cccccc--cccCCCCCEEECCCCCCCCCCH-h-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchH
Confidence 997633 3469999999999999997544 4 5789999999999999996 7888999999999999999998 5555
Q ss_pred ccCcCCCCCCcEEEc
Q 035786 329 ILSTNGNASGAVFNI 343 (693)
Q Consensus 329 ~~~~~~~~~l~~l~l 343 (693)
. .+..+..+..+++
T Consensus 256 ~-~~~~l~~L~~l~~ 269 (487)
T 3oja_A 256 D-FFSKNQRVQTVAK 269 (487)
T ss_dssp H-HHTTCHHHHHHHH
T ss_pred H-HHHhCCCCcEEec
Confidence 3 3333333333333
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-27 Score=264.63 Aligned_cols=148 Identities=23% Similarity=0.385 Sum_probs=133.5
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|++.++..||||++.......++|.+|+++|.+++|+|||+++++|.+ +..++|||||+
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~lv~e~~~ 344 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMS 344 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCCT
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee--ccceEeeehhc
Confidence 4567778999999999999999888899999998766667889999999999999999999999864 56899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|+|.++|+.... ..+++.++.+|+.||++||+|||.. +||||||||+|||+++++.+||+|||+++...
T Consensus 345 ~gsL~~~l~~~~~------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 345 KGSLLDFLKGETG------KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp TEEHHHHHSHHHH------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred CCcHHHHHhhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 9999999974321 3489999999999999999999998 99999999999999999999999999999864
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-26 Score=244.99 Aligned_cols=165 Identities=17% Similarity=0.173 Sum_probs=140.1
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 584 (693)
.++|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|.+++..+ +||||+++++++.+ ++..+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~~ 97 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRLY 97 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC-SSEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc-CCEEE
Confidence 356888899999999999999975 48899999997532 2356788999999988 89999999998765 46889
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+||||+++|+|.+++.... .+++.+...++.+++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 98 lv~E~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG 166 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG--------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFG 166 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEeCCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCC
Confidence 9999999999999997532 489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... .....+||+.|+|
T Consensus 167 ~a~~~~~~~~-~~~~~~gt~~y~a 189 (353)
T 2i0e_A 167 MCKENIWDGV-TTKTFCGTPDYIA 189 (353)
T ss_dssp TCBCCCCTTC-CBCCCCSCGGGCC
T ss_pred cccccccCCc-ccccccCCccccC
Confidence 9987532221 1344678888876
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-26 Score=247.16 Aligned_cols=163 Identities=17% Similarity=0.133 Sum_probs=132.6
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
++|...+.||+|+||.||+++.. +++.||||++.......+.+.+|++++++++|||||++++++.+ +...++||||+
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~~ 98 (361)
T 3uc3_A 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT-PTHLAIIMEYA 98 (361)
T ss_dssp TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEECC
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEee-CCEEEEEEEeC
Confidence 45777889999999999999975 68999999997665556779999999999999999999999875 46889999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc--eEECCcccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE--VRLGSLSELHA 668 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~--~ki~Dfgla~~ 668 (693)
++|+|.+++.... .+++.....++.+++.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 99 ~~~~L~~~l~~~~--------~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 99 SGGELYERICNAG--------RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp CSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred CCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 9999999997532 489999999999999999999998 9999999999999998765 99999999986
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
...... ....+||++|+|
T Consensus 168 ~~~~~~--~~~~~gt~~y~a 185 (361)
T 3uc3_A 168 SVLHSQ--PKSTVGTPAYIA 185 (361)
T ss_dssp ---------------CTTSC
T ss_pred ccccCC--CCCCcCCCCcCC
Confidence 422221 233567777775
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-26 Score=240.98 Aligned_cols=166 Identities=19% Similarity=0.329 Sum_probs=138.8
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~lv~e 588 (693)
.|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++.+++|||||++++++.+.. ...++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 4667789999999999999975 58999999997533 23567899999999999999999999887543 25789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee----CCCCceEECCcc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL----DDKFEVRLGSLS 664 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl----d~~~~~ki~Dfg 664 (693)
|+++|+|.+++..... ...+++.++..|+.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 90 ~~~~~~L~~~l~~~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSN-----AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp CCTTCBHHHHHHSGGG-----TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred CCCCCCHHHHHHHhcc-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 9999999999975422 13499999999999999999999998 99999999999999 888899999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... ....+||+.|+|
T Consensus 162 ~a~~~~~~~~--~~~~~gt~~y~a 183 (319)
T 4euu_A 162 AARELEDDEQ--FVSLYGTEEYLH 183 (319)
T ss_dssp TCEECCTTCC--BCCCCSCGGGCC
T ss_pred CceecCCCCc--eeecccCCCccC
Confidence 9998744332 233557777765
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-26 Score=248.31 Aligned_cols=161 Identities=19% Similarity=0.290 Sum_probs=131.1
Q ss_pred CccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 515 SETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
...++||+|+||.||+|+. .+|+.||||++..... ..++|.+|++++.+++|||||+++++|.+ ++..++||||+++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-KNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEECCTT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEeCCCC
Confidence 3456899999999999986 4689999999976443 35689999999999999999999999875 4688999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee--CCCCceEECCcccccccC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL--DDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl--d~~~~~ki~Dfgla~~~~ 670 (693)
|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+|||+ ++++.+||+|||+++...
T Consensus 171 ~~L~~~l~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 171 GELFDRIIDES-------YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp CEEHHHHHHTG-------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred CcHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 99999987532 3489999999999999999999998 89999999999999 677899999999999874
Q ss_pred CCCcceeeeeehhhhhhh
Q 035786 671 DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~~~~~~~~~~y~a 688 (693)
.... ....+||++|+|
T Consensus 241 ~~~~--~~~~~gt~~y~a 256 (373)
T 2x4f_A 241 PREK--LKVNFGTPEFLA 256 (373)
T ss_dssp TTCB--CCCCCSSCTTCC
T ss_pred Cccc--cccccCCCcEeC
Confidence 4332 223457777765
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-26 Score=241.91 Aligned_cols=148 Identities=21% Similarity=0.396 Sum_probs=127.7
Q ss_pred CCCccCccccCCeeeEEEEEe-----CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-----AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-----~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~l 585 (693)
+|...+.||+|+||.||+|++ .+++.||||++...... .+.|.+|++++.+++|||||+++++|... ....++
T Consensus 11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 90 (295)
T 3ugc_A 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90 (295)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEE
T ss_pred HhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEE
Confidence 466778999999999999985 35889999999754333 46799999999999999999999998643 235789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..+++.++.+++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 91 IMEYLPYGSLRDYLQKHK-------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp EEECCTTCBHHHHHHHCG-------GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred EEEeCCCCCHHHHHHhcc-------cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 999999999999997532 2489999999999999999999998 999999999999999999999999999
Q ss_pred ccccC
Q 035786 666 LHAQG 670 (693)
Q Consensus 666 a~~~~ 670 (693)
++...
T Consensus 161 ~~~~~ 165 (295)
T 3ugc_A 161 TKVLP 165 (295)
T ss_dssp CC---
T ss_pred ccccc
Confidence 99874
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-26 Score=241.80 Aligned_cols=163 Identities=20% Similarity=0.158 Sum_probs=133.4
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||+||+|+.. +|+.||||++...... ..++.+|+..+.++ +|||||+++++|.+ +...++|
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-~~~~~lv 135 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-GGILYLQ 135 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-CCEEEEE
Confidence 35888899999999999999975 7999999998654332 34566677766666 89999999999876 4689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+ +|+|.+++.... ..++|..+..|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 136 ~e~~-~~~L~~~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a 204 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG-------ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLL 204 (311)
T ss_dssp EECC-CCBHHHHHHHHC-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTC
T ss_pred Eecc-CCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceee
Confidence 9999 779999987543 3599999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .+...||+.|+|
T Consensus 205 ~~~~~~~~--~~~~~gt~~y~a 224 (311)
T 3p1a_A 205 VELGTAGA--GEVQEGDPRYMA 224 (311)
T ss_dssp EECC--------CCCCCGGGCC
T ss_pred eecccCCC--CcccCCCccccC
Confidence 88744332 233457777765
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-26 Score=238.00 Aligned_cols=149 Identities=23% Similarity=0.421 Sum_probs=133.2
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|+..++..||||++.......+.|.+|++++.+++||||+++++++.+ +..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--EPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC--CCcEEEEecCC
Confidence 3467788999999999999999888899999998766667889999999999999999999998753 46899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++..... ..+++.++.+++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 91 ~~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 91 NGSLVDFLKTPSG------IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp TCBHHHHTTSHHH------HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred CCCHHHHHhcCCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 9999999974321 2589999999999999999999998 999999999999999999999999999998744
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-26 Score=239.87 Aligned_cols=169 Identities=21% Similarity=0.347 Sum_probs=126.6
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++++++++|||||++++++.+ ++..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e 83 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-ENKLTLVFE 83 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-TTEEEEEEE
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-CCeEEEEEE
Confidence 45778889999999999999864 689999999875432 24678999999999999999999998875 468899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|++ |+|.+++...... .....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 84 ~~~-~~L~~~l~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVG--NTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp CCC-CBHHHHHHHHHSS--SCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred ecC-CCHHHHHHhcccc--ccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 998 6999999753211 1123589999999999999999999998 999999999999999999999999999988
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
....... ....++|++|+|
T Consensus 158 ~~~~~~~-~~~~~~t~~y~a 176 (317)
T 2pmi_A 158 FGIPVNT-FSSEVVTLWYRA 176 (317)
T ss_dssp TTSCCCC-CCCCCSCCTTCC
T ss_pred cCCCccc-CCCCcccccccC
Confidence 6432221 233456666665
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-26 Score=249.43 Aligned_cols=172 Identities=20% Similarity=0.285 Sum_probs=136.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
++|...+.||+|+||.||+|++. +++.||||++...... ..+|.+|++++.+++|||||++++++.+ +...
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~ 149 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-SLPR 149 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSC
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCCC
Confidence 34677889999999999999953 3678999999653222 4579999999999999999999999875 4678
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC---ceEE
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF---EVRL 660 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~---~~ki 660 (693)
++||||+++|+|.++++...... .....++|.++..|+.|+++||+|||+. +|+||||||+|||++.++ .+||
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRP-SQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred EEEEEeCCCCCHHHHHHhhcccc-CccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence 99999999999999998644211 1224599999999999999999999998 999999999999999544 5999
Q ss_pred CCcccccccCC-CCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGD-SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~-~~~~~~~~~~~~~~y~a 688 (693)
+|||+++.... ..........+|+.|+|
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~a 254 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMP 254 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCC
T ss_pred CCCccccccccccccccCCCcCCcccEEC
Confidence 99999987521 11111223445666665
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-26 Score=244.04 Aligned_cols=164 Identities=19% Similarity=0.212 Sum_probs=128.8
Q ss_pred CCCCccCccccCCeeeEEEEEe----CCCcEEEEEEecccc-----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL----AGGTTVVVKKVSLHS-----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 582 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++.+++|||||++++++.+ ++.
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~ 95 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT-GGK 95 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC-SSC
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc-CCE
Confidence 3577788999999999999986 468999999997542 123568899999999999999999998875 467
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||+++|+|.+++.... .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~D 164 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG--------IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTD 164 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECC
T ss_pred EEEEEeCCCCCcHHHHHHhCC--------CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEe
Confidence 899999999999999997532 488999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++....... .....+||++|+|
T Consensus 165 fg~~~~~~~~~~-~~~~~~gt~~y~a 189 (327)
T 3a62_A 165 FGLCKESIHDGT-VTHTFCGTIEYMA 189 (327)
T ss_dssp CSCC-----------CTTSSCCTTSC
T ss_pred CCcccccccCCc-cccccCCCcCccC
Confidence 999987532211 1223567777765
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.9e-26 Score=239.93 Aligned_cols=162 Identities=15% Similarity=0.225 Sum_probs=138.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
.|...+.||+|+||.||+|+.. +|+.||||.+..... ..+.+.+|++++.+++|||||++++++.+ +...+
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~ 90 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN-KTDVI 90 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEE
Confidence 4777889999999999999974 689999999865322 25679999999999999999999999875 46889
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC----ceEE
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF----EVRL 660 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~----~~ki 660 (693)
+||||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+|||+++++ .+||
T Consensus 91 lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 159 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK--------ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKI 159 (326)
T ss_dssp EEEECCCSCBHHHHHTTS--------SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEE
T ss_pred EEEEcCCCCCHHHHHHhc--------CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEE
Confidence 999999999999999643 3489999999999999999999998 999999999999999887 8999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++....... ....+||+.|+|
T Consensus 160 ~Dfg~a~~~~~~~~--~~~~~gt~~y~a 185 (326)
T 2y0a_A 160 IDFGLAHKIDFGNE--FKNIFGTPEFVA 185 (326)
T ss_dssp CCCTTCEECCTTSC--CCCCCSCTTTCC
T ss_pred EECCCCeECCCCCc--cccccCCcCcCC
Confidence 99999998743322 234567777776
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-26 Score=255.97 Aligned_cols=164 Identities=18% Similarity=0.192 Sum_probs=130.7
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++.+++|||||+++++|.+ ++..++|
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-~~~~~lv 226 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-HDRLCFV 226 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-TTEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-CCEEEEE
Confidence 4578889999999999999996 468999999996532 224568899999999999999999999876 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc-CCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH-ECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~-~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||++|+|.+++... ..+++..+..++.+++.||+|||+ . +||||||||+|||++.++.+||+|||+
T Consensus 227 ~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~ 295 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE--------RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGL 295 (446)
T ss_dssp ECCCSSCBHHHHHHHH--------SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCC
T ss_pred EeeCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCC
Confidence 9999999999999754 248999999999999999999997 6 899999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++........ .+..+||++|+|
T Consensus 296 a~~~~~~~~~-~~~~~gt~~y~a 317 (446)
T 4ejn_A 296 CKEGIKDGAT-MKTFCGTPEYLA 317 (446)
T ss_dssp CCTTCC------CCSSSCGGGCC
T ss_pred ceeccCCCcc-cccccCCccccC
Confidence 9875332221 344678888876
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-26 Score=244.50 Aligned_cols=164 Identities=19% Similarity=0.247 Sum_probs=139.3
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
.++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++|||||+++++|.+ ++..++|
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~lv 106 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLV 106 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence 345788899999999999999864 6899999999754433 3578899999999999999999999875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC---CceEECCc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK---FEVRLGSL 663 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~---~~~ki~Df 663 (693)
|||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||++.+ ..+||+||
T Consensus 107 ~e~~~gg~L~~~l~~~--------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Df 175 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR--------EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADF 175 (362)
T ss_dssp ECCCCSCBHHHHHTTC--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCC
T ss_pred EecCCCCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeec
Confidence 9999999999998643 3489999999999999999999998 99999999999999865 45999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+++...+... ....+||+.|+|
T Consensus 176 G~a~~~~~~~~--~~~~~gt~~y~a 198 (362)
T 2bdw_A 176 GLAIEVNDSEA--WHGFAGTPGYLS 198 (362)
T ss_dssp TTCBCCTTCCS--CCCSCSCTTTCC
T ss_pred CcceEecCCcc--cccCCCCccccC
Confidence 99988754332 334678888876
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-26 Score=235.25 Aligned_cols=147 Identities=23% Similarity=0.379 Sum_probs=133.7
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|+..++..||||++.......+++.+|++++.+++||||+++++++.+ ++..++||||+++
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVTEFMEH 87 (267)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSCEEEECCCTT
T ss_pred heeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCCeEEEEeCCCC
Confidence 466778999999999999999888999999998766667889999999999999999999999875 4678999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 88 ~~L~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 155 (267)
T 3t9t_A 88 GCLSDYLRTQR-------GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL 155 (267)
T ss_dssp CBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred CcHHHHHhhCc-------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccc
Confidence 99999997542 3589999999999999999999998 89999999999999999999999999998763
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-26 Score=251.53 Aligned_cols=165 Identities=18% Similarity=0.263 Sum_probs=136.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC----Cee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE----TEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~ 583 (693)
++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++.+++|||||++++++...+ ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 4677889999999999999996 46899999999753322 467899999999999999999999886532 468
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++|||||+ |+|.++++.. ..+++.....++.||++||.|||+. +|+||||||+|||+++++.+||+||
T Consensus 106 ~lv~e~~~-~~L~~~~~~~--------~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DF 173 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKTP--------IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDF 173 (432)
T ss_dssp EEEEECCS-EEHHHHHHSS--------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEecCC-cCHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccC
Confidence 99999997 6999999753 3489999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCc---------------------ceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQ---------------------NVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~---------------------~~~~~~~~~~~y~a 688 (693)
|+++....... ...+..+||++|+|
T Consensus 174 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 219 (432)
T 3n9x_A 174 GLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRA 219 (432)
T ss_dssp TTCEEC-------------------------------CCCCCTTCC
T ss_pred CCcccccccccccccccccccccccccccchhccccCCCCCccccC
Confidence 99998743221 12466788999987
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-26 Score=247.91 Aligned_cols=147 Identities=27% Similarity=0.450 Sum_probs=122.2
Q ss_pred CCccCccccCCeeeEEEEEeC--CC--cEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA--GG--TTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~--~g--~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
|...+.||+|+||.||+|+.. ++ ..||||.+...... .++|.+|++++++++|||||+++++|.+.++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 444578999999999999863 32 46899998653332 4689999999999999999999999876556789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++... ..+++.++..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 171 e~~~~g~L~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNET-------HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp ECCTTCBHHHHHHCTT-------CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred ECCCCCCHHHHHhhcc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccc
Confidence 9999999999997532 3489999999999999999999998 99999999999999999999999999998
Q ss_pred ccC
Q 035786 668 AQG 670 (693)
Q Consensus 668 ~~~ 670 (693)
...
T Consensus 241 ~~~ 243 (373)
T 3c1x_A 241 DMY 243 (373)
T ss_dssp ---
T ss_pred ccc
Confidence 763
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7.2e-26 Score=235.13 Aligned_cols=164 Identities=20% Similarity=0.297 Sum_probs=136.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++|||||++++++.+ ++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-CCEEEEEE
Confidence 35677889999999999999974 6899999999754332 4678999999999999999999999876 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++ ++.+++.... ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 81 e~~~~-~l~~~~~~~~-------~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 149 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSCN-------GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLAR 149 (292)
T ss_dssp ECCSE-EHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ecCCC-CHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccce
Confidence 99985 6666665422 3589999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
..+..... .+...+|++|+|
T Consensus 150 ~~~~~~~~-~~~~~~t~~y~a 169 (292)
T 3o0g_A 150 AFGIPVRC-YSAEVVTLWYRP 169 (292)
T ss_dssp ECCSCCSC-CCSCCSCGGGCC
T ss_pred ecCCcccc-ccCCccccCCcC
Confidence 87433222 333567777765
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-26 Score=237.51 Aligned_cols=163 Identities=20% Similarity=0.336 Sum_probs=133.8
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|...+.||+|+||.||+|+..+|+.||||++..... ..+.+.+|++++++++|||||++++++.+ ++..++||||
T Consensus 3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 81 (288)
T 1ob3_A 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-KKRLVLVFEH 81 (288)
T ss_dssp SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-SSCEEEEEEC
T ss_pred cchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-CCeEEEEEEe
Confidence 4667789999999999999988899999999865432 24678999999999999999999999875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++ +|.+++.... ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 82 ~~~-~l~~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE-------GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF 150 (288)
T ss_dssp CSE-EHHHHHHTST-------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHH
T ss_pred cCC-CHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcccccc
Confidence 985 9999987532 3489999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
...... .+...+|+.|+|
T Consensus 151 ~~~~~~-~~~~~~t~~y~a 168 (288)
T 1ob3_A 151 GIPVRK-YTHEIVTLWYRA 168 (288)
T ss_dssp CC----------CCCTTCC
T ss_pred Cccccc-cccccccccccC
Confidence 432221 233456666655
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-25 Score=228.28 Aligned_cols=225 Identities=24% Similarity=0.202 Sum_probs=181.1
Q ss_pred EEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccC
Q 035786 123 LDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFF 202 (693)
Q Consensus 123 L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 202 (693)
.+..+..++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..+..+++|++|++++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 444455554 4566553 5799999999999988777899999999999999999987778899999999999999999
Q ss_pred CCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCccc-CchhhhcCccccccccccccccccCCCc
Q 035786 203 TGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGS-LPLELRGLRNLAKLVISENGLEGQLSEG 281 (693)
Q Consensus 203 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~i~~~ 281 (693)
++..|..+..+++|++|++++|++++..+..++++++|++|++++|.+++. +|..+.++++|++|++++|++++..+ .
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~-~ 167 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC-T 167 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG-G
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH-H
Confidence 988888899999999999999999988777899999999999999999874 68899999999999999999986443 3
Q ss_pred ccCCCCCCC----EEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecC
Q 035786 282 LFPTLDQLQ----VVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 282 ~~~~l~~L~----~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~ 353 (693)
.|..+.+|+ .|++++|++++..+..+ ...+|+.|+|++|++++ +|...+..+++|+.|++++|+++|+++
T Consensus 168 ~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSC-CCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceee-cCHhHhcccccccEEEccCCcccccCC
Confidence 345555555 78899999886555444 44578888888888884 443445566677777777777766554
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-26 Score=243.16 Aligned_cols=162 Identities=18% Similarity=0.243 Sum_probs=138.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+++++.++|||||++++++.+ +...++|
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv 87 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT-PTDIVMV 87 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence 4577788999999999999996 578999999986432 224578999999999999999999999875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+ +|+|.+++.... .+++.+...++.|++.||+|||.. +|+||||||+|||+++++.+||+|||++
T Consensus 88 ~E~~-~g~l~~~l~~~~--------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s 155 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK--------RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLS 155 (336)
T ss_dssp ECCC-CEEHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCT
T ss_pred EECC-CCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccc
Confidence 9999 789999987542 489999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+...+... ....+||+.|+|
T Consensus 156 ~~~~~~~~--~~~~~gt~~y~a 175 (336)
T 3h4j_B 156 NIMTDGNF--LKTSCGSPNYAA 175 (336)
T ss_dssp BTTTTSBT--TCCCTTSTTTSC
T ss_pred eeccCCcc--cccccCCcCcCC
Confidence 88744332 234568888876
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-26 Score=243.34 Aligned_cols=167 Identities=20% Similarity=0.250 Sum_probs=138.9
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc------cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS------FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~------~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++.+++|||||++++++.+ ++..++
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~l 103 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS-DGMLYM 103 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEE
Confidence 477788999999999999986 468999999985421 135779999999999999999999998876 468899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc---eEECC
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE---VRLGS 662 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~---~ki~D 662 (693)
||||+++|+|.+++..... ....+++.....++.|++.||+|||+. +|+||||||+|||++.+.. +||+|
T Consensus 104 v~e~~~g~~L~~~l~~~~~----~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~D 176 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRAD----AGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGG 176 (351)
T ss_dssp EEECCSSCBHHHHHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECC
T ss_pred EEeCCCCCCHHHHHHHhcc----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEec
Confidence 9999999999988864321 113589999999999999999999998 9999999999999986654 99999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++........ ....+||++|+|
T Consensus 177 fg~a~~~~~~~~~-~~~~~gt~~y~a 201 (351)
T 3c0i_A 177 FGVAIQLGESGLV-AGGRVGTPHFMA 201 (351)
T ss_dssp CTTCEECCTTSCB-CCCCCSCGGGCC
T ss_pred CcceeEecCCCee-ecCCcCCcCccC
Confidence 9999987543321 334678888876
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-26 Score=243.10 Aligned_cols=175 Identities=21% Similarity=0.298 Sum_probs=138.8
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCC
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHET 581 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~ 581 (693)
..++|...+.||+|+||.||+|+.. +++.||||.+...... .+.|.+|++++.+++|||||+++++|.+ ++
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~ 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV-GK 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CC
Confidence 4567888899999999999999974 3488999999754322 4679999999999999999999999875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCC----------------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLE----------------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDV 645 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~----------------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDl 645 (693)
..++||||+++|+|.++++...... ......+++.++..|+.++++||+|||+. +|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 7899999999999999998642110 00124699999999999999999999998 9999999
Q ss_pred CCCCeeeCCCCceEECCcccccccCCCCc-ceeeeeehhhhhhh
Q 035786 646 QASSILLDDKFEVRLGSLSELHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 646 k~~NILld~~~~~ki~Dfgla~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
||+||++++++.+||+|||+++....... .......+|+.|+|
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~a 244 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMP 244 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCC
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecC
Confidence 99999999999999999999987633211 11223445555554
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-26 Score=247.27 Aligned_cols=165 Identities=19% Similarity=0.174 Sum_probs=139.3
Q ss_pred CCCCccCccccCCeeeEEEEEe----CCCcEEEEEEecccc-----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL----AGGTTVVVKKVSLHS-----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHET 581 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~ 581 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++.++ +||||+++++++.+ +.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~ 132 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-ET 132 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-TT
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee-Cc
Confidence 4577889999999999999987 368999999986432 2246688899999999 69999999998875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~ 201 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE--------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLT 201 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEES
T ss_pred eEEEEeecCCCCCHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEe
Confidence 8899999999999999997532 489999999999999999999998 89999999999999999999999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++.............+||+.|+|
T Consensus 202 DfG~a~~~~~~~~~~~~~~~gt~~y~a 228 (355)
T 1vzo_A 202 DFGLSKEFVADETERAYDFCGTIEYMA 228 (355)
T ss_dssp CSSEEEECCGGGGGGGCGGGSCCTTCC
T ss_pred eCCCCeecccCCCCcccCcccCcCccC
Confidence 999999764433333344567777765
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.6e-26 Score=245.02 Aligned_cols=166 Identities=23% Similarity=0.360 Sum_probs=129.3
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCC-CCCccceeEEEEcCC-Cee
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVS-HARLVPLLGQCLEHE-TEK 583 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~-~~~ 583 (693)
..++|...+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+.++.+++ |||||++++++...+ ...
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 346788889999999999999986 56899999998643222 456889999999997 999999999987432 357
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++|||||+ |+|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 87 ~lv~e~~~-~~L~~~~~~---------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DF 153 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA---------NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADF 153 (388)
T ss_dssp EEEEECCS-EEHHHHHHH---------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEecccC-cCHHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCC
Confidence 99999998 699999875 2489999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCC--------------------CCcceeeeeehhhhhhh
Q 035786 664 SELHAQGD--------------------SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~--------------------~~~~~~~~~~~~~~y~a 688 (693)
|+++.... ......+..+||++|+|
T Consensus 154 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 198 (388)
T 3oz6_A 154 GLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRA 198 (388)
T ss_dssp TTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCC
T ss_pred cccccccccccccccccccccccccccccccccccCCcccCCcCC
Confidence 99987632 11223455789999987
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-26 Score=243.04 Aligned_cols=164 Identities=20% Similarity=0.328 Sum_probs=129.8
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCc----EEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGT----TVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~----~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||.||+|+.. +|+ .||+|++.... ...++|.+|++++++++|||||+++++|.+ ...++
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 93 (327)
T 3poz_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQL 93 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES--SSEEE
T ss_pred HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec--CCeEE
Confidence 4777889999999999999963 444 46888875433 235789999999999999999999999975 35789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|+||+++|+|.++++... ..+++..+..++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 94 v~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~ 163 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 163 (327)
T ss_dssp EEECCTTCBHHHHHHHST-------TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTH
T ss_pred EEEecCCCcHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcc
Confidence 999999999999998643 3489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcc-eeeeeehhhhhhh
Q 035786 666 LHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
++........ ......+|+.|+|
T Consensus 164 a~~~~~~~~~~~~~~~~~t~~y~a 187 (327)
T 3poz_A 164 AKLLGAEEKEYHAEGGKVPIKWMA 187 (327)
T ss_dssp HHHHTTTCC-------CCCGGGSC
T ss_pred eeEccCCcccccccCCCccccccC
Confidence 9987433221 2223344555554
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7e-26 Score=241.52 Aligned_cols=159 Identities=25% Similarity=0.401 Sum_probs=135.7
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.|...+.||+|+||.||+|+. .+|+.||||++...... .++|.+|++++++++|||||+++++|.+ ++..++||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~ 133 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLVM 133 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCeEEEEE
Confidence 377778999999999999995 57999999999754332 3578999999999999999999999876 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||++ |+|.+++.... ..++|.++..++.++++||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 134 e~~~-g~l~~~l~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 202 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK-------KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSAS 202 (348)
T ss_dssp ECCS-EEHHHHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred ecCC-CCHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCce
Confidence 9998 78988886432 3589999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... ..||++|+|
T Consensus 203 ~~~~~~~-----~~gt~~y~a 218 (348)
T 1u5q_A 203 IMAPANS-----FVGTPYWMA 218 (348)
T ss_dssp SSSSBCC-----CCSCGGGCC
T ss_pred ecCCCCc-----ccCCcceeC
Confidence 8754333 456666654
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-26 Score=236.23 Aligned_cols=165 Identities=22% Similarity=0.299 Sum_probs=125.1
Q ss_pred CCCCccCccccCCeeeEEEEEeCC----CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...+.||+|+||.||+|.... +..||||++...... .+.|.+|++++.+++|||||++++++. ++..++
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~l 92 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWI 92 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSCEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc--cCccEE
Confidence 346778899999999999998642 567999998653322 467999999999999999999999874 356899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 93 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 162 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK-------YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 162 (281)
T ss_dssp EEECCTTEEHHHHHHHTT-------TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---
T ss_pred EEecCCCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccc
Confidence 999999999999997532 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++..............+++.|+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~a 185 (281)
T 1mp8_A 163 SRYMEDSTYYKASKGKLPIKWMA 185 (281)
T ss_dssp ----------------CCGGGCC
T ss_pred ccccCcccccccccCCCcccccC
Confidence 99874433222223334455544
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-26 Score=236.95 Aligned_cols=168 Identities=19% Similarity=0.362 Sum_probs=141.6
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
..+|...+.||+|+||.||+|+.. ++..||||.+.......++|.+|++++.+++||||++++++|.+ +...++||||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~ 90 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEF 90 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSEEEEEEC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCCEEEEEEc
Confidence 345777889999999999999975 48899999998665556789999999999999999999998865 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.+++..... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~~~~L~~~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 91 MTYGNLLDYLRECNR------QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp CTTEEHHHHHHHCCT------TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred CCCCcHHHHHHhccc------CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 999999999976432 4589999999999999999999998 9999999999999999999999999999987
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
............+++.|+|
T Consensus 162 ~~~~~~~~~~~~~~~~y~a 180 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTA 180 (288)
T ss_dssp CSSSSEEETTEEECGGGCC
T ss_pred cCCccccccCCccccCcCC
Confidence 5443332333444445543
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-26 Score=242.60 Aligned_cols=163 Identities=15% Similarity=0.201 Sum_probs=123.4
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.+.|...+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++.+++|||||+++++|.+ +...++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFET-PTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEec-CCeEEEEEEe
Confidence 455778889999999999999975 58899999997543 34568899999999999999999999875 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECCcccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGSLSEL 666 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~Dfgla 666 (693)
+++|+|.+++... ..+++.++..++.+++.||+|||.. +|+||||||+|||++. ++.+||+|||++
T Consensus 130 ~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a 198 (349)
T 2w4o_A 130 VTGGELFDRIVEK--------GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198 (349)
T ss_dssp CCSCBHHHHHTTC--------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred CCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence 9999999999753 2489999999999999999999998 9999999999999975 899999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....||+.|+|
T Consensus 199 ~~~~~~~~--~~~~~gt~~y~a 218 (349)
T 2w4o_A 199 KIVEHQVL--MKTVCGTPGYCA 218 (349)
T ss_dssp ----------------CGGGSC
T ss_pred cccCcccc--cccccCCCCccC
Confidence 98643322 334567777765
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=242.69 Aligned_cols=164 Identities=15% Similarity=0.219 Sum_probs=139.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.|...+.||+|+||.||+|... +|+.||+|.+..... ..+.+.+|++++.+++|||||++++++.+ +...++||||
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~lv~E~ 129 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-KYEMVLILEF 129 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-SSEEEEEEEC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-CCEEEEEEEc
Confidence 45778889999999999999874 689999999875432 24578999999999999999999998875 4689999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC--CCceEECCccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD--KFEVRLGSLSELH 667 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~--~~~~ki~Dfgla~ 667 (693)
+++|+|.+++.... ..+++.+...++.+++.||+|||+. +|+||||||+|||++. ++.+||+|||+++
T Consensus 130 ~~gg~L~~~l~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~ 199 (387)
T 1kob_A 130 LSGGELFDRIAAED-------YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLAT 199 (387)
T ss_dssp CCCCBHHHHTTCTT-------CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred CCCCcHHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccce
Confidence 99999999987432 3589999999999999999999998 9999999999999984 4789999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... .....||+.|+|
T Consensus 200 ~~~~~~~--~~~~~gt~~y~a 218 (387)
T 1kob_A 200 KLNPDEI--VKVTTATAEFAA 218 (387)
T ss_dssp ECCTTSC--EEEECSSGGGCC
T ss_pred ecCCCcc--eeeeccCCCccC
Confidence 8754332 344578888876
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-26 Score=251.73 Aligned_cols=163 Identities=18% Similarity=0.276 Sum_probs=139.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+++++.++|||||++++++.+ ++..++|
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~-~~~~~lv 94 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST-PSDIFMV 94 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEE
Confidence 34677889999999999999974 79999999996532 224678999999999999999999999875 4689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 95 ~E~~~gg~L~~~l~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a 163 (476)
T 2y94_A 95 MEYVSGGELFDYICKN--------GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLS 163 (476)
T ss_dssp EECCSSEEHHHHTTSS--------SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred EeCCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccch
Confidence 9999999999999643 3489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... ....+||++|+|
T Consensus 164 ~~~~~~~~--~~~~~gt~~y~a 183 (476)
T 2y94_A 164 NMMSDGEF--LRTSCGSPNYAA 183 (476)
T ss_dssp EECCTTCC--BCCCCSCSTTCC
T ss_pred hhcccccc--ccccCCCcCeEC
Confidence 98754322 234567887765
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.3e-26 Score=248.44 Aligned_cols=165 Identities=16% Similarity=0.172 Sum_probs=138.7
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
.++|...+.||+|+||.||+|.. .+|+.||+|++...... .+.+.+|++++++++|||||++++++.+ ++..++|
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~lv 88 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-EGHHYLI 88 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-SSEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-CCEEEEE
Confidence 34578889999999999999985 57999999998754322 4578999999999999999999998875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC---CCCceEECCc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD---DKFEVRLGSL 663 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld---~~~~~ki~Df 663 (693)
|||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||++ +++.+||+||
T Consensus 89 ~E~~~gg~L~~~i~~~--------~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DF 157 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR--------EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADF 157 (444)
T ss_dssp ECCCBCCBHHHHHHHC--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCC
T ss_pred EEeCCCCCHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccC
Confidence 9999999999999753 2489999999999999999999998 999999999999999 4678999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+++........ ....+||++|+|
T Consensus 158 G~a~~~~~~~~~-~~~~~gt~~Y~A 181 (444)
T 3soa_A 158 GLAIEVEGEQQA-WFGFAGTPGYLS 181 (444)
T ss_dssp SSCBCCCTTCCB-CCCSCSCGGGCC
T ss_pred ceeEEecCCCce-eecccCCcccCC
Confidence 999887543322 344678888876
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.93 E-value=8.4e-26 Score=253.20 Aligned_cols=168 Identities=19% Similarity=0.259 Sum_probs=141.8
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++.+++|||||++++++.+ +...++|
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~lV 263 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-KTDLCLV 263 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-CCEEEEE
Confidence 45677788999999999999974 69999999996532 234678999999999999999999998765 4689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++..... ....+++.....++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 264 mE~~~gg~L~~~l~~~~~----~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla 336 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDE----DNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA 336 (543)
T ss_dssp ECCCTTCBHHHHHHTSST----TSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEeccCCCHHHHHHHhhc----ccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeeccee
Confidence 999999999999975431 123589999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ ....+||++|+|
T Consensus 337 ~~~~~~~~~-~~~~~GT~~Y~A 357 (543)
T 3c4z_A 337 VELKAGQTK-TKGYAGTPGFMA 357 (543)
T ss_dssp EECCTTCCC-BCCCCSCTTTSC
T ss_pred eeccCCCcc-cccccCCccccC
Confidence 987443322 234578888886
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-26 Score=235.42 Aligned_cols=165 Identities=25% Similarity=0.384 Sum_probs=134.4
Q ss_pred CCccCccccCCeeeEEEEEeCC----CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
|...+.||+|+||.||+|+..+ +..||||++...... .+.|.+|++++++++|||||+++++|.+.++..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 5567899999999999998643 236899998753322 4679999999999999999999999887666789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 107 e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 107 PYMKHGDLRNFIRNET-------HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp ECCTTCBHHHHHHCTT-------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eCCCCCCHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 9999999999997532 3589999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCc---ceeeeeehhhhhhh
Q 035786 668 AQGDSHQ---NVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~---~~~~~~~~~~~y~a 688 (693)
...+... ...+...+|+.|+|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~a 200 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMA 200 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSC
T ss_pred cccccchhccccccCCCCCccccC
Confidence 7643221 11333455666655
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.8e-26 Score=243.98 Aligned_cols=173 Identities=16% Similarity=0.251 Sum_probs=138.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC--------CCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA--------GGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHE 580 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~--------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~ 580 (693)
++|...+.||+|+||.||+|+.. ++..||||++...... .+++.+|++++.++ +|||||+++++|.+ +
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~-~ 147 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-D 147 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc-C
Confidence 45677789999999999999852 2468999999754332 46799999999999 99999999999875 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
+..++||||+++|+|.+++....... ......++|.++.+|+.+++.||+|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 67899999999999999998643210 01124599999999999999999999998 99999999999999
Q ss_pred CCCCceEECCcccccccCCCCc-ceeeeeehhhhhhh
Q 035786 653 DDKFEVRLGSLSELHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
++++.+||+|||+++....... .......+|+.|+|
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~a 261 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 261 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSC
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeC
Confidence 9999999999999997643221 11222344555554
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-26 Score=246.02 Aligned_cols=164 Identities=22% Similarity=0.247 Sum_probs=130.3
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHH-HhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDL-FSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~-l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...++||+|+||.||+|+.. +++.||||++..... ..+.+.+|..+ ++.++|||||++++++.+ ++..|+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~-~~~~~l 116 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLYF 116 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC-SSEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe-CCEEEE
Confidence 45788899999999999999975 588999999975432 23457778777 577899999999998875 468999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++++.. .+++.....++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 117 v~E~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~ 185 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER--------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGL 185 (373)
T ss_dssp EEECCCSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCB
T ss_pred EEeCCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcc
Confidence 999999999999997642 488889999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... .....+||++|+|
T Consensus 186 a~~~~~~~~-~~~~~~gt~~y~a 207 (373)
T 2r5t_A 186 CKENIEHNS-TTSTFCGTPEYLA 207 (373)
T ss_dssp CGGGBCCCC-CCCSBSCCCCCCC
T ss_pred ccccccCCC-ccccccCCccccC
Confidence 987432221 1334678888876
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.9e-26 Score=239.50 Aligned_cols=167 Identities=22% Similarity=0.336 Sum_probs=134.2
Q ss_pred HhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcC--CCCCccceeEEEEcCC---CeeE
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRV--SHARLVPLLGQCLEHE---TEKL 584 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l--~H~niv~l~g~~~~~~---~~~~ 584 (693)
..++|...+.||+|+||.||+|+.. |+.||||++.... ...+.+|.+++... +|||||++++++.... ...+
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 111 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence 3456888999999999999999986 8999999985432 34456666666655 9999999999987642 4689
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-----CCCeEecCCCCCCeeeCCCCceE
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC-----NPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~-----~p~iiHrDlk~~NILld~~~~~k 659 (693)
+||||+++|+|.++++. ..+++.++..++.+++.||+|||+.+ .++|+||||||+|||++.++.+|
T Consensus 112 lv~e~~~~g~L~~~l~~---------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 112 LITDYHENGSLYDYLKS---------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp EEECCCTTCBHHHHHHH---------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred EEEeccCCCcHHHHhhc---------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 99999999999999975 24899999999999999999999763 45899999999999999999999
Q ss_pred ECCcccccccCCCCcc---eeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSHQN---VLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~~~---~~~~~~~~~~y~a 688 (693)
|+|||+++........ ......||+.|+|
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a 214 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCC
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeC
Confidence 9999999876332221 1123467777765
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7e-26 Score=247.75 Aligned_cols=164 Identities=14% Similarity=0.249 Sum_probs=131.3
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---------CHHHHHHHHHHHhcCCCCCccceeEEEEcC
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---------KKESYMMELDLFSRVSHARLVPLLGQCLEH 579 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~ 579 (693)
..++|...+.||+|+||.||+|.. .+++.||||++..... ..+.|.+|++++++++|||||++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 456788899999999999999986 4689999999865321 12358899999999999999999998753
Q ss_pred CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC---C
Q 035786 580 ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK---F 656 (693)
Q Consensus 580 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~---~ 656 (693)
+..++|||||++|+|.+++... ..+++.+...++.|++.||+|||+. +|+||||||+|||++.+ +
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~ 279 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGN--------KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDC 279 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSS--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSC
T ss_pred -CceEEEEEcCCCCcHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcc
Confidence 4689999999999999988643 3489999999999999999999998 89999999999999754 4
Q ss_pred ceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 657 EVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 657 ~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+||+|||+++..+.... ....+||+.|+|
T Consensus 280 ~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~a 309 (419)
T 3i6u_A 280 LIKITDFGHSKILGETSL--MRTLCGTPTYLA 309 (419)
T ss_dssp CEEECCSSTTTSCC-------------CTTCC
T ss_pred eEEEeecccceecCCCcc--ccccCCCCCccC
Confidence 699999999998754332 344667777776
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-26 Score=240.32 Aligned_cols=166 Identities=15% Similarity=0.205 Sum_probs=130.7
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCC---ee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHET---EK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~---~~ 583 (693)
++|...+.||+|+||.||+|+. .+++.||||++...... .+.|.+|++++.+++|||||++++++..... ..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 4577788999999999999995 57899999999754322 3578999999999999999999998864321 23
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++||||+++|+|.++++... .+++.+...++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEG--------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCC
T ss_pred EEEEecCCCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeec
Confidence 89999999999999997532 489999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCc--ceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQ--NVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~--~~~~~~~~~~~y~a 688 (693)
|+++....... ......+||+.|+|
T Consensus 161 g~a~~~~~~~~~~~~~~~~~gt~~y~a 187 (311)
T 3ork_A 161 GIARAIADSGNSVTQTAAVIGTAQYLS 187 (311)
T ss_dssp SCC------------------CCTTCC
T ss_pred cCcccccccccccccccccCcCcccCC
Confidence 99988743221 12233557777765
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-26 Score=243.99 Aligned_cols=157 Identities=15% Similarity=0.180 Sum_probs=130.0
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc---------CHHHHHHHHHHHhcCC---------CCCccceeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF---------KKESYMMELDLFSRVS---------HARLVPLLG 574 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~---------~~~~f~~Ei~~l~~l~---------H~niv~l~g 574 (693)
+|...+.||+|+||.||+|+. +|+.||||++..... ..+.+.+|++++++++ |||||++.+
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~ 99 (336)
T 2vuw_A 21 KLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNS 99 (336)
T ss_dssp HHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEE
T ss_pred cchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcc
Confidence 366778999999999999998 689999999975421 1367999999999886 888888888
Q ss_pred EEEc-----------------------------CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHH
Q 035786 575 QCLE-----------------------------HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGA 625 (693)
Q Consensus 575 ~~~~-----------------------------~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~i 625 (693)
.+.. .+...++||||+++|++.+.+.+ ..+++.....|+.|+
T Consensus 100 ~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---------~~~~~~~~~~i~~qi 170 (336)
T 2vuw_A 100 VHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---------KLSSLATAKSILHQL 170 (336)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---------TCCCHHHHHHHHHHH
T ss_pred eeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---------cCCCHHHHHHHHHHH
Confidence 6531 14678999999999987776643 248999999999999
Q ss_pred HHHHhhhc-cCCCCCeEecCCCCCCeeeCCCC--------------------ceEECCcccccccCCCCcceeeeeehhh
Q 035786 626 AEGLSYLH-HECNPPLVHRDVQASSILLDDKF--------------------EVRLGSLSELHAQGDSHQNVLTRFLWRQ 684 (693)
Q Consensus 626 a~gl~yLH-~~~~p~iiHrDlk~~NILld~~~--------------------~~ki~Dfgla~~~~~~~~~~~~~~~~~~ 684 (693)
+.||+||| .. +||||||||+|||++.++ .+||+|||+|+...+. ..+||+
T Consensus 171 ~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~ 241 (336)
T 2vuw_A 171 TASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCD 241 (336)
T ss_dssp HHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCC
T ss_pred HHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEee
Confidence 99999999 77 899999999999999887 9999999999987433 246777
Q ss_pred hhhh
Q 035786 685 LYQS 688 (693)
Q Consensus 685 ~y~a 688 (693)
.|||
T Consensus 242 ~y~a 245 (336)
T 2vuw_A 242 VSMD 245 (336)
T ss_dssp CTTC
T ss_pred cccC
Confidence 7775
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.9e-26 Score=240.82 Aligned_cols=164 Identities=21% Similarity=0.268 Sum_probs=140.0
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---------CHHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---------KKESYMMELDLFSRVSHARLVPLLGQCLEHE 580 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~ 580 (693)
.++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.|.+|++++.+++|||||+++++|.+ +
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-~ 101 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN-Q 101 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC-S
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee-C
Confidence 45688889999999999999985 5689999999975432 23467889999999999999999999875 4
Q ss_pred CeeEEEEccCCCC-ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceE
Q 035786 581 TEKLLVYKYMVCG-DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 581 ~~~~lv~ey~~~G-sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~k 659 (693)
+..++||||+..| +|.+++... ..+++..+..|+.+++.||+|||.. +|+||||||+|||+++++.+|
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~--------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~k 170 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH--------PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIK 170 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEE
T ss_pred CEEEEEEEeCCCCccHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEE
Confidence 6789999999887 999999753 2489999999999999999999998 999999999999999999999
Q ss_pred ECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+|||+++....... ....+||+.|+|
T Consensus 171 L~Dfg~a~~~~~~~~--~~~~~gt~~y~a 197 (335)
T 3dls_A 171 LIDFGSAAYLERGKL--FYTFCGTIEYCA 197 (335)
T ss_dssp ECCCTTCEECCTTCC--BCEECSCGGGCC
T ss_pred EeecccceECCCCCc--eeccCCCccccC
Confidence 999999998754333 334567888876
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-24 Score=243.87 Aligned_cols=256 Identities=25% Similarity=0.290 Sum_probs=214.1
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
..++.|++++|.+. .+|..+ .++|++|+|++|.++ .+|. .+++|++|+|++|++++ +|. .+++|++|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCL---PAHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCC---CTTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCcC-ccChhh---CCCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEE
Confidence 35889999999988 888765 379999999999998 4666 57899999999999984 665 789999999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 252 (693)
|++|.+++ +|. .+++|+.|++++|.+++ +|.. +++|++|+|++|++++ +|. .+.+|+.|++++|.+++
T Consensus 108 Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~ 175 (622)
T 3g06_A 108 IFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS 175 (622)
T ss_dssp ECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC
Confidence 99999986 555 67899999999999985 6654 4899999999999986 454 35689999999999996
Q ss_pred cCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCc
Q 035786 253 SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILST 332 (693)
Q Consensus 253 ~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~ 332 (693)
+| ..+++|+.|++++|.+++ +|. .+++|+.|++++|.++. +|.. +++|+.|+|++|+|++ +|
T Consensus 176 -l~---~~~~~L~~L~Ls~N~l~~-l~~----~~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---- 237 (622)
T 3g06_A 176 -LP---MLPSGLQELSVSDNQLAS-LPT----LPSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---- 237 (622)
T ss_dssp -CC---CCCTTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC----
T ss_pred -Cc---ccCCCCcEEECCCCCCCC-CCC----ccchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC----
Confidence 55 567899999999999985 553 34789999999999985 4543 4899999999999996 66
Q ss_pred CCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCcceeecCCCcC-----cccccCCCcCCCCc
Q 035786 333 NGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQGTVADDRG-----RNVSLGRNCLQSVA 393 (693)
Q Consensus 333 ~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g~ip~~~~-----~~~~l~~n~l~g~~ 393 (693)
..+++|+.|++++|+++. +|. .+++|+.|+|++|.++ .+|..+. ..+++++|.+.+..
T Consensus 238 ~~l~~L~~L~Ls~N~L~~-lp~-~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~ 300 (622)
T 3g06_A 238 VLPSELKELMVSGNRLTS-LPM-LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERT 300 (622)
T ss_dssp CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHH
T ss_pred CCCCcCcEEECCCCCCCc-CCc-ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcC
Confidence 345789999999999984 665 7789999999999999 7887664 35788999887653
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=242.63 Aligned_cols=167 Identities=21% Similarity=0.245 Sum_probs=138.8
Q ss_pred CCCCccCccccC--CeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKG--HSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G--~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...+.||+| +||.||+|+.. +|+.||||++...... .+.+.+|++++++++|||||++++++.+ ++..++
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~l 103 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWV 103 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE-CCEEEE
Confidence 347778899999 99999999975 6999999999754433 3578889999999999999999999876 468999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|||||++|+|.+++..... ..+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||.
T Consensus 104 v~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~ 174 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM------DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRS 174 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGG
T ss_pred EEEccCCCCHHHHHhhhcc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccc
Confidence 9999999999999976432 3489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCC------Ccceeeeeehhhhhhh
Q 035786 666 LHAQGDS------HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~------~~~~~~~~~~~~~y~a 688 (693)
+....+. ........+||++|+|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 203 (389)
T 3gni_B 175 NLSMISHGQRQRVVHDFPKYSVKVLPWLS 203 (389)
T ss_dssp CEECEETTEECSCBCCCCTTCTTTGGGSC
T ss_pred ceeeccccccccccccccccccccccccC
Confidence 8765211 1111122467777765
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=230.95 Aligned_cols=225 Identities=20% Similarity=0.186 Sum_probs=127.3
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecc
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 198 (693)
.+..+++..+.+.... .+..+++|+.|++++|.+.. + +.+..+++|++|+|++|.+++ + ..+..+++|++|+++
T Consensus 20 ~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECC
Confidence 4444555555554432 23455666666666666552 2 235566666666666666654 2 245555666666666
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccC
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
+|.+++..|..+..+++|++|++++|++++..|..|+.+++|++|++++|++++..+..+.
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~------------------- 154 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFD------------------- 154 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT-------------------
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhc-------------------
Confidence 6665554444455555555555555555555444455555555555555555544444444
Q ss_pred CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCC
Q 035786 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFR 358 (693)
Q Consensus 279 ~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~ 358 (693)
.+++|+.|++++|++++..+..+..+++|+.|++++|++++..| ..+..++.|+.|++++|.+.|.+|
T Consensus 155 ------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~~~~~~~----- 222 (272)
T 3rfs_A 155 ------KLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD-GVFDRLTSLQYIWLHDNPWDCTCP----- 222 (272)
T ss_dssp ------TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT-TTTTTCTTCCEEECCSSCBCCCTT-----
T ss_pred ------cCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCH-HHHhCCcCCCEEEccCCCccccCc-----
Confidence 44555555555555554444445555555555555555554333 234455556666666666655443
Q ss_pred CCCEEEccCCcceeecCCCcCc
Q 035786 359 KFSLIDLSSNYFQGTVADDRGR 380 (693)
Q Consensus 359 ~l~~ldLs~N~l~g~ip~~~~~ 380 (693)
.++.++++.|.++|.+|.+++.
T Consensus 223 ~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 223 GIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp TTHHHHHHHHHTGGGBBCTTSC
T ss_pred HHHHHHHHHHhCCCcccCcccc
Confidence 5667788888888888887654
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-25 Score=235.46 Aligned_cols=157 Identities=17% Similarity=0.208 Sum_probs=123.8
Q ss_pred cCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 517 TNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
.+.||+|+||.||+|+.. +|+.||||++... ..+.+.+|++++.+++ |||||++++++.+ +...++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHD-QLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-CCEEEEEEEccCCCc
Confidence 478999999999999974 6899999999643 3466889999999997 9999999999875 468899999999999
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC---ceEECCcccccccCC
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF---EVRLGSLSELHAQGD 671 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~---~~ki~Dfgla~~~~~ 671 (693)
|.+++... ..+++.++..|+.+++.||+|||+. +|+||||||+|||++.+. .+||+|||+++....
T Consensus 93 L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 93 LFERIKKK--------KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp HHHHHHHC--------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred HHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 99999763 3489999999999999999999998 999999999999997655 899999999987643
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
.... ....++|++|+|
T Consensus 162 ~~~~-~~~~~~t~~y~a 177 (325)
T 3kn6_A 162 DNQP-LKTPCFTLHYAA 177 (325)
T ss_dssp -----------------
T ss_pred CCCc-ccccCCCcCccC
Confidence 3222 334567777776
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.4e-26 Score=250.59 Aligned_cols=162 Identities=20% Similarity=0.281 Sum_probs=129.6
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-----C
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE-----T 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-----~ 581 (693)
.++|...+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+++++.++|||||++++++...+ .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 35678889999999999999985 46899999999754322 467889999999999999999999986432 3
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++|||||+++ |.+.+.. .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~----------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~ 206 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM----------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 206 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS----------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEEC
T ss_pred eEEEEEeCCCCC-HHHHHhh----------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEE
Confidence 569999999864 6666642 389999999999999999999998 99999999999999999999999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++..+.... .+..+||++|+|
T Consensus 207 DFG~a~~~~~~~~--~~~~~gt~~y~a 231 (464)
T 3ttj_A 207 DFGLARTAGTSFM--MTPYVVTRYYRA 231 (464)
T ss_dssp CCCCC-----CCC--C----CCCTTCC
T ss_pred EEEeeeecCCCcc--cCCCcccccccC
Confidence 9999998754332 455678888876
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-25 Score=234.11 Aligned_cols=165 Identities=21% Similarity=0.346 Sum_probs=134.4
Q ss_pred CCccCccccCCeeeEEEEEe-----CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-----AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-----~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~l 585 (693)
|...+.||+|+||.||+|++ .+++.||||++..... ..+.+.+|++++.+++||||+++++++.+.+ ...++
T Consensus 23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 102 (302)
T 4e5w_A 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 102 (302)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence 66778999999999999984 3588999999975432 3578999999999999999999999987532 45789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 103 IMEFLPSGSLKEYLPKNK-------NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp EEECCTTCBHHHHHHHHT-------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred EEEeCCCCcHHHHHHhcc-------ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 999999999999996533 3489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCc--ceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQ--NVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~--~~~~~~~~~~~y~a 688 (693)
++....... .......+|..|+|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~a 197 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYA 197 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCC
T ss_pred cccccCCCcceeccCCCCCCccccC
Confidence 998744322 11223445555544
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.9e-26 Score=239.75 Aligned_cols=164 Identities=20% Similarity=0.298 Sum_probs=131.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcE----EEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTT----VVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~----vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|...+.||+|+||.||+|+.. +++. ||+|.+..... ..+.+.+|++++++++|||||+++++|.+ ...++
T Consensus 14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~ 91 (325)
T 3kex_A 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG--SSLQL 91 (325)
T ss_dssp TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB--SSEEE
T ss_pred HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CccEE
Confidence 4667789999999999999964 4543 88888754322 23568889999999999999999998853 56899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 92 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 161 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR-------GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGV 161 (325)
T ss_dssp EEECCTTCBSHHHHHSSG-------GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSG
T ss_pred EEEeCCCCCHHHHHHHcc-------ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCc
Confidence 999999999999997532 3488999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCc-ceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
++....... ...+...++..|+|
T Consensus 162 a~~~~~~~~~~~~~~~~~~~~y~a 185 (325)
T 3kex_A 162 ADLLPPDDKQLLYSEAKTPIKWMA 185 (325)
T ss_dssp GGGSCCCTTCCC-----CCTTTSC
T ss_pred ccccCcccccccccCCCCcccccC
Confidence 998743322 22333455556654
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=234.04 Aligned_cols=164 Identities=19% Similarity=0.233 Sum_probs=133.6
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++||||++++++|.+ ++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-KRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-CCeEEEEE
Confidence 45777889999999999999975 5899999998654433 4578899999999999999999999876 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++.. ..+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 82 e~~~~~~l~~~~~~~--------~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 150 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ--------RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFAR 150 (311)
T ss_dssp ECCSEEHHHHHHHTS--------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EeCCCchHHHHHhhh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCch
Confidence 999999999988643 3489999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
........ .+...+|++|+|
T Consensus 151 ~~~~~~~~-~~~~~~~~~y~a 170 (311)
T 4agu_A 151 LLTGPSDY-YDDEVATRWYRS 170 (311)
T ss_dssp ECC-------------GGGCC
T ss_pred hccCcccc-cCCCcCCccccC
Confidence 87433222 234567777765
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-25 Score=238.99 Aligned_cols=174 Identities=22% Similarity=0.341 Sum_probs=137.0
Q ss_pred hCCCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHS--FKKESYMMELDLFSRV-SHARLVPLLGQCLEHET 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~ 581 (693)
.++|...+.||+|+||.||+|+. .++..||||.+.... ...+.+.+|++++.++ +||||++++++|.. ++
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~ 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-SG 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee-CC
Confidence 35677888999999999999995 245689999997532 2256799999999999 99999999999875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCC---------------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLE---------------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQ 646 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~---------------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk 646 (693)
..++||||+++|+|.+++....... ......++|..+..++.+++.||+|||.. +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 7899999999999999998643210 00123489999999999999999999998 99999999
Q ss_pred CCCeeeCCCCceEECCcccccccCCCCcc-eeeeeehhhhhhh
Q 035786 647 ASSILLDDKFEVRLGSLSELHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 647 ~~NILld~~~~~ki~Dfgla~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
|+||+++.++.+||+|||+++........ ......+|+.|+|
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~a 242 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMA 242 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccC
Confidence 99999999999999999999876433221 2233445566654
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-25 Score=234.31 Aligned_cols=166 Identities=24% Similarity=0.322 Sum_probs=134.3
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc------CHHHHHHHHHHHhcCC---CCCccceeEEEEcCC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF------KKESYMMELDLFSRVS---HARLVPLLGQCLEHE 580 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~------~~~~f~~Ei~~l~~l~---H~niv~l~g~~~~~~ 580 (693)
+++|...+.||+|+||.||+|+. .+|+.||||++..... ....+.+|++++.+++ |||||+++++|....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 56788899999999999999995 5689999999864221 1356778888877775 999999999997643
Q ss_pred C----eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC
Q 035786 581 T----EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF 656 (693)
Q Consensus 581 ~----~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~ 656 (693)
. ..++||||++ |+|.+++..... ..+++.++..|+.+++.||+|||+. +|+||||||+||++++++
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~ 157 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPP------PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGG 157 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCT------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTS
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCC
Confidence 2 4689999997 699999975432 3489999999999999999999998 899999999999999999
Q ss_pred ceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 657 EVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 657 ~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+||+|||+++....... .+...||++|+|
T Consensus 158 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~a 187 (308)
T 3g33_A 158 TVKLADFGLARIYSYQMA--LTPVVVTLWYRA 187 (308)
T ss_dssp CEEECSCSCTTTSTTCCC--SGGGGCCCSSCC
T ss_pred CEEEeeCccccccCCCcc--cCCccccccccC
Confidence 999999999988743322 233456666655
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.8e-26 Score=244.82 Aligned_cols=166 Identities=19% Similarity=0.329 Sum_probs=137.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~lv~e 588 (693)
.|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++.+++|||||++++++.+.+ ...++|||
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 4667789999999999999975 58999999997533 23567889999999999999999999987543 25789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee----CCCCceEECCcc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL----DDKFEVRLGSLS 664 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl----d~~~~~ki~Dfg 664 (693)
|+++|+|.++++.... ...+++..+..++.+++.||+|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 90 ~~~~g~L~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSN-----AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp CCTTEEHHHHTTSGGG-----TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred cCCCCCHHHHHHhhhc-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 9999999999975321 13489999999999999999999998 99999999999999 788889999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... ....+||+.|+|
T Consensus 162 ~a~~~~~~~~--~~~~~gt~~y~a 183 (396)
T 4eut_A 162 AARELEDDEQ--FVSLYGTEEYLH 183 (396)
T ss_dssp GCEECCCGGG--SSCSSSCCTTCC
T ss_pred CceEccCCCc--cccccCCccccC
Confidence 9998744322 223456666654
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-25 Score=232.03 Aligned_cols=203 Identities=20% Similarity=0.186 Sum_probs=100.3
Q ss_pred CCCccEEEecCCCCCcCCCccc--CCCccCCEEecccCcCCccCc----cccCCCCCCCEEEccCCCCCCcCchhhhcCc
Q 035786 117 LPALQVLDLRSCSLSGSIPGSF--GNLSRLNVLYLSGNSLAGNVP----ATLGELKKLSNLDLSRNLLTGEIPNAISLLG 190 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 190 (693)
+++|++|+|++|.+++..|..+ +++++|++|+|++|.+++..| ..+..+++|++|+|++|.+++..|..+..++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 3445666666665555555555 555555555555555554333 2233445555555555555444444444455
Q ss_pred CCCeeecccccCCCc--CcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCch----hhhcCccc
Q 035786 191 NLTRLNLASNFFTGQ--IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPL----ELRGLRNL 264 (693)
Q Consensus 191 ~L~~L~Ls~N~l~g~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~----~~~~l~~L 264 (693)
+|++|+|++|++.+. ++. +..++.+++|++|++++|+++. +|. .+..+++|
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~----------------------~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L 226 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMA----------------------ALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQP 226 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHT----------------------TSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCC
T ss_pred CCCEEECCCCCCccchhhhH----------------------HHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCC
Confidence 555555555544331 111 1122344455555555555542 111 13445555
Q ss_pred cccccccccccccCCCcccCCC---CCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEE
Q 035786 265 AKLVISENGLEGQLSEGLFPTL---DQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVF 341 (693)
Q Consensus 265 ~~L~Ls~N~l~g~i~~~~~~~l---~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l 341 (693)
++|+|++|++++.+|+.+ ..+ ++|+.|++++|+++ .+|..+. ++|+.|+|++|+|++. |. ...++.|+.|
T Consensus 227 ~~L~Ls~N~l~~~~p~~~-~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~--~~~l~~L~~L 299 (310)
T 4glp_A 227 HSLDLSHNSLRATVNPSA-PRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ--PDELPEVDNL 299 (310)
T ss_dssp SSEECTTSCCCCCCCSCC-SSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC--TTSCCCCSCE
T ss_pred CEEECCCCCCCccchhhH-HhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch--hhhCCCccEE
Confidence 555555555554444332 222 45666666666665 3444443 5666666666666542 21 2344556666
Q ss_pred EccCCccc
Q 035786 342 NISNNMLY 349 (693)
Q Consensus 342 ~ls~N~l~ 349 (693)
++++|+++
T Consensus 300 ~L~~N~l~ 307 (310)
T 4glp_A 300 TLDGNPFL 307 (310)
T ss_dssp ECSSTTTS
T ss_pred ECcCCCCC
Confidence 66666654
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-25 Score=228.98 Aligned_cols=163 Identities=15% Similarity=0.207 Sum_probs=138.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc-cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS-FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~-~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.|...+.||+|+||.||+|+.. ++..||+|++.... ...+.|.+|++++.+++||||++++++|.+ +...++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 87 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-NTDIYLVMEL 87 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEEC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeEEEEEec
Confidence 34777889999999999999975 47899999997543 336789999999999999999999999875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCcccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLSEL 666 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfgla 666 (693)
+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 88 ~~~~~L~~~~~~~~--------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 88 CTGGELFERVVHKR--------VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp CCSCBHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred cCCCcHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 99999999987542 489999999999999999999998 99999999999999 78899999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....+|+.|+|
T Consensus 157 ~~~~~~~~--~~~~~~t~~y~a 176 (277)
T 3f3z_A 157 ARFKPGKM--MRTKVGTPYYVS 176 (277)
T ss_dssp EECCTTSC--BCCCCSCTTTCC
T ss_pred eeccCccc--hhccCCCCCccC
Confidence 88643322 233456777765
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-25 Score=239.62 Aligned_cols=173 Identities=20% Similarity=0.288 Sum_probs=137.1
Q ss_pred CHHHHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC------------HHHHHHHHHHHhcCCCCCcc
Q 035786 503 TYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK------------KESYMMELDLFSRVSHARLV 570 (693)
Q Consensus 503 ~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~------------~~~f~~Ei~~l~~l~H~niv 570 (693)
...++....++|...+.||+|+||.||+|...+|+.||||++...... .+.|.+|++++.+++|||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 456777888999999999999999999999888999999998542211 26799999999999999999
Q ss_pred ceeEEEEcCC----CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCC
Q 035786 571 PLLGQCLEHE----TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQ 646 (693)
Q Consensus 571 ~l~g~~~~~~----~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk 646 (693)
++++++...+ ...++||||++ |+|.+++.... ..+++..+..++.+++.||+|||+. +|+|||||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 161 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-------IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLH 161 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCC
Confidence 9999986432 25789999998 78998887432 3589999999999999999999998 99999999
Q ss_pred CCCeeeCCCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 647 ASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 647 ~~NILld~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+||+++.++.+||+|||+++....... .+...+|++|+|
T Consensus 162 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~a 201 (362)
T 3pg1_A 162 PGNILLADNNDITICDFNLAREDTADAN--KTHYVTHRWYRA 201 (362)
T ss_dssp GGGEEECTTCCEEECCTTC-----------------CGGGCC
T ss_pred hHHEEEcCCCCEEEEecCcccccccccc--cceecccceecC
Confidence 9999999999999999999986533222 233566777765
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-25 Score=237.87 Aligned_cols=164 Identities=18% Similarity=0.196 Sum_probs=137.9
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
++|...+.||+|+||.||+|+. .+|+.||||.+.... ..+.+.+|++++.++ +||||+++++++.. +...++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPC-GKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEE-TTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEec-CCccEEEEEe
Confidence 4577788999999999999995 578999999986543 234688999999999 99999999998876 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc-----eEECCcc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE-----VRLGSLS 664 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~-----~ki~Dfg 664 (693)
+ +|+|.+++.... ..+++.++..|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||
T Consensus 87 ~-~~~L~~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 87 L-GPSLEDLFDLCD-------RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp C-CCBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred C-CCCHHHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 9 999999997532 3599999999999999999999998 9999999999999999887 9999999
Q ss_pred cccccCCCCcc------eeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQN------VLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~------~~~~~~~~~~y~a 688 (693)
+++.+.+.... ......||+.|+|
T Consensus 156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~a 185 (330)
T 2izr_A 156 LAKEYIDPETKKHIPYREHKSLTGTARYMS 185 (330)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCC
T ss_pred cceeeecCCCCccccccccCCcCCCccccC
Confidence 99986332211 1234678888876
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.2e-25 Score=226.45 Aligned_cols=201 Identities=26% Similarity=0.326 Sum_probs=121.5
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|+.|++++|.++. + +.++.+++|++|+|++|.+++. +.+..+++|++|+|++|.+++..|..+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 5566666666666542 2 2355566666666666666542 2456666666666666666655555556666666666
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|.+++..|..+..+++|++|++++|++++..|..++.+++|++|++++|++++..+..+..+++|++|++++|++++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 66666665555555666666666666666665555555666666666666666665555555666666666666666664
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCc
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPI 329 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~ 329 (693)
. ++..|..+++|+.|++++|.+.+. +++|+.|+++.|+++|.+|.
T Consensus 196 ~-~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 196 V-PDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp C-CTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBC
T ss_pred c-CHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccC
Confidence 3 333445666666666666666543 33566666666777776664
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-25 Score=233.55 Aligned_cols=163 Identities=24% Similarity=0.370 Sum_probs=134.9
Q ss_pred CCccCccccCCeeeEEEEEeC-----CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-----GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLL 585 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-----~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~l 585 (693)
|...+.||+|+||.||++.+. +|+.||||++..... ..+.|.+|++++++++|||||++++++.+. ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 466789999999999998753 588999999975432 246799999999999999999999999764 346789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++... .+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 113 v~e~~~~~~L~~~l~~~---------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 180 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH---------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGL 180 (318)
T ss_dssp EECCCTTCBHHHHGGGS---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred EEecccCCcHHHHHhhC---------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccc
Confidence 99999999999999652 389999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcc--eeeeeehhhhhhh
Q 035786 666 LHAQGDSHQN--VLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~--~~~~~~~~~~y~a 688 (693)
++........ ......+++.|+|
T Consensus 181 a~~~~~~~~~~~~~~~~~~~~~y~a 205 (318)
T 3lxp_A 181 AKAVPEGHEYYRVREDGDSPVFWYA 205 (318)
T ss_dssp CEECCTTCSEEEC---CCCCGGGCC
T ss_pred cccccccccccccccCCCCCceeeC
Confidence 9987443221 1233445555654
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-25 Score=258.51 Aligned_cols=158 Identities=20% Similarity=0.306 Sum_probs=128.5
Q ss_pred CccccCCeeeEEEEEeC---CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLA---GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~---~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
+.||+|+||.||+|.+. .++.||||+++..... .++|.+|+++|.+++|||||+++++|.. +..++|||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCEEEEEEccC
Confidence 47999999999999753 4678999999754332 5789999999999999999999999853 46889999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.++++.. ..++|.++..|+.||+.||+|||+. +||||||||+|||+++++.+||+|||+++.+..
T Consensus 453 ~g~L~~~l~~~--------~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~ 521 (635)
T 4fl3_A 453 LGPLNKYLQQN--------RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 521 (635)
T ss_dssp TEEHHHHHHHC--------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC
T ss_pred CCCHHHHHhhC--------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccccc
Confidence 99999999753 3489999999999999999999998 999999999999999999999999999998743
Q ss_pred CCc--ceeeeeehhhhhhh
Q 035786 672 SHQ--NVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~--~~~~~~~~~~~y~a 688 (693)
... ...+...+++.|+|
T Consensus 522 ~~~~~~~~~~~~~t~~y~A 540 (635)
T 4fl3_A 522 DENYYKAQTHGKWPVKWYA 540 (635)
T ss_dssp -------------CGGGSC
T ss_pred CccccccccCCCCceeeeC
Confidence 221 12233344555654
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-25 Score=229.32 Aligned_cols=149 Identities=23% Similarity=0.452 Sum_probs=129.0
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~lv~e 588 (693)
+|...+.||+|+||.||+|+.. |+.||||++...... .++|.+|++++.+++|||||+++++|.+. ....++|||
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (271)
T 3kmu_A 11 QLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH 89 (271)
T ss_dssp GCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred HhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence 4677889999999999999985 889999999764432 45799999999999999999999998753 246799999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++.... ..+++.++..++.+++.||+|||+. .++|+||||||+||++++++.+||+|||++..
T Consensus 90 ~~~~~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 90 WMPYGSLYNVLHEGTN------FVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp CCTTCBHHHHHHSCSS------CCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred ccCCCcHHHHHhhccc------CCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 9999999999985332 3589999999999999999999986 33499999999999999999999999988765
Q ss_pred c
Q 035786 669 Q 669 (693)
Q Consensus 669 ~ 669 (693)
.
T Consensus 163 ~ 163 (271)
T 3kmu_A 163 F 163 (271)
T ss_dssp T
T ss_pred e
Confidence 4
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-25 Score=237.81 Aligned_cols=165 Identities=23% Similarity=0.398 Sum_probs=129.4
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHH--HhcCCCCCccceeEEEEc----CCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDL--FSRVSHARLVPLLGQCLE----HETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~--l~~l~H~niv~l~g~~~~----~~~~~~l 585 (693)
++|...+.||+|+||.||+|+. +++.||||++.... .+.+..|.++ +..++||||+++++++.. .....++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 4577788999999999999987 58999999996533 3345555544 556899999999986532 1224689
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC------CCCeEecCCCCCCeeeCCCCceE
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC------NPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~------~p~iiHrDlk~~NILld~~~~~k 659 (693)
||||+++|+|.+++... ..+|..+.+|+.++++||+|||+.+ .++|+||||||+|||++.++.+|
T Consensus 90 v~e~~~~g~L~~~l~~~---------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLH---------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EECCCTTCBHHHHHHHC---------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred EEecCCCCcHHHHHhhc---------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 99999999999999753 3689999999999999999999874 44899999999999999999999
Q ss_pred ECCcccccccCCCC-------cceeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSH-------QNVLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~-------~~~~~~~~~~~~y~a 688 (693)
|+|||+++.+.... .......+||+.|+|
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 196 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMA 196 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeC
Confidence 99999998864321 111223457777765
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-25 Score=235.44 Aligned_cols=156 Identities=24% Similarity=0.377 Sum_probs=131.0
Q ss_pred CCCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
++|...+.||+|+||.||+|+. .+++.||||++...... .+.+.+|++++.+++|||||++++++.+ ++..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~ 101 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-DGPL 101 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSC
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec-CCce
Confidence 4567778999999999999985 34588999999754322 4679999999999999999999998875 4678
Q ss_pred EEEEccCCCCChhhhhhccCCCC----------------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCC
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLE----------------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQA 647 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~----------------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~ 647 (693)
++||||+++|+|.++++...... ......+++.++.+++.++++||+|||+. +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 99999999999999998643210 00113489999999999999999999998 999999999
Q ss_pred CCeeeCCCCceEECCcccccccCC
Q 035786 648 SSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 648 ~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+||++++++.+||+|||+++....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~ 202 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYE 202 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTT
T ss_pred heEEEcCCCCEEEccccccccccc
Confidence 999999999999999999987643
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-25 Score=235.05 Aligned_cols=173 Identities=24% Similarity=0.340 Sum_probs=138.3
Q ss_pred CCCCccCccccCCeeeEEEEEe------CCCcEEEEEEeccccc--CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSF--KKESYMMELDLFSRV-SHARLVPLLGQCLEHETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 582 (693)
++|...+.||+|+||.||+|+. .+++.||||++..... ..+.|.+|++++.++ +||||++++++|.+ ++.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~ 101 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-GGP 101 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSS
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec-CCC
Confidence 4577788999999999999984 3468999999975432 246799999999999 99999999999875 467
Q ss_pred eEEEEccCCCCChhhhhhccCCCC----------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLE----------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~----------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
.++||||+++|+|.+++....... ......+++.++.+++.++++||+|||+. +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 899999999999999998643210 01123599999999999999999999998 99999999999999
Q ss_pred CCCCceEECCcccccccCCCCcc-eeeeeehhhhhhh
Q 035786 653 DDKFEVRLGSLSELHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
++++.+||+|||+++........ ......+|+.|+|
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a 215 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMA 215 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCC
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeC
Confidence 99999999999999987443322 1222334555544
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-25 Score=240.34 Aligned_cols=161 Identities=19% Similarity=0.320 Sum_probs=130.6
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-----C
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE-----T 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-----~ 581 (693)
.+.|...+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++|||||++++++...+ .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 34577888999999999999996 56999999999643322 457889999999999999999999886432 2
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++||||| +++|.++++. ..+++.....++.|+++||+|||+. +|+||||||+|||+++++.+||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---------~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~ 170 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---------EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKIL 170 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred eEEEEEecC-CCCHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEE
Confidence 459999999 8899999875 2489999999999999999999998 99999999999999999999999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++..... .+..++|++|+|
T Consensus 171 Dfg~a~~~~~~----~~~~~~t~~y~a 193 (367)
T 1cm8_A 171 DFGLARQADSE----MTGYVVTRWYRA 193 (367)
T ss_dssp CCTTCEECCSS----CCSSCSCGGGCC
T ss_pred eeecccccccc----cCcCcCCCCcCC
Confidence 99999986433 234567888876
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-25 Score=237.20 Aligned_cols=166 Identities=19% Similarity=0.239 Sum_probs=137.6
Q ss_pred CCCccCccccCCeeeEEEEEe-----CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-----AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-----~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~l 585 (693)
+|...+.||+|+||.||+|++ .+++.||||++...... .+.|.+|++++.+++||||+++++++... +...++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 103 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL 103 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence 467788999999999999984 35889999999754333 46799999999999999999999998742 346789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... ..+++.++..|+.+++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 104 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 104 VMEYLPSGCLRDFLQRHR-------ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp EEECCTTCBHHHHHHHHG-------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred EEeecCCCCHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 999999999999997532 2489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcc--eeeeeehhhhhhh
Q 035786 666 LHAQGDSHQN--VLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~--~~~~~~~~~~y~a 688 (693)
++........ ......+|+.|+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~a 198 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYA 198 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSC
T ss_pred ceecccCCccceeeccCCccccccC
Confidence 9987433221 1223445555654
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-24 Score=219.19 Aligned_cols=201 Identities=25% Similarity=0.269 Sum_probs=124.3
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecc
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 198 (693)
.++.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++...+..+..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4677888888877 3565553 567788888888776666677777888888888877775544555667777777777
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccC
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
+|.+++..+..+..+++|++|++++|++++..|..|+.+++|++|++++|.+++..+..|..+++|++|+|++|.+++ +
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~ 172 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR-V 172 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-C
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcE-e
Confidence 777766555556667777777777777766666666666667777776666665544445555555555555555543 2
Q ss_pred CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcC
Q 035786 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNI 323 (693)
Q Consensus 279 ~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l 323 (693)
+...|..+++|+.|++++|++++..+..+..+++|+.|+|++|.+
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPW 217 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCe
Confidence 333334444455555555444443333344444444444444443
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=234.23 Aligned_cols=150 Identities=20% Similarity=0.340 Sum_probs=131.5
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcC----------
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEH---------- 579 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~---------- 579 (693)
.++|...+.||+|+||.||+|+. .+|+.||||++.......+.+.+|++++.+++||||++++++|.+.
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 34577889999999999999996 4789999999975444457799999999999999999999988652
Q ss_pred --CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 580 --ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 580 --~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
....++||||+++|+|.++++... ..+++.++..++.++++||+|||+. +|+||||||+||+++.++.
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSEN-------LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSC-------GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccc-------cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 235789999999999999997532 3478899999999999999999998 9999999999999999999
Q ss_pred eEECCcccccccC
Q 035786 658 VRLGSLSELHAQG 670 (693)
Q Consensus 658 ~ki~Dfgla~~~~ 670 (693)
+||+|||+++...
T Consensus 155 ~kl~dfg~~~~~~ 167 (303)
T 1zy4_A 155 VKIGDFGLAKNVH 167 (303)
T ss_dssp EEECCCCCCSCTT
T ss_pred EEEeeCcchhhcc
Confidence 9999999998764
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=8.8e-26 Score=236.90 Aligned_cols=183 Identities=18% Similarity=0.228 Sum_probs=144.1
Q ss_pred CHHHHHHHhCCCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCcccee
Q 035786 503 TYEQLLRATGNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLL 573 (693)
Q Consensus 503 ~~~~l~~at~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~ 573 (693)
...++....++|...+.||+|+||.||+|+. .+++.||||.+...... .+.+.+|++++.++ +|||||+++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3444444556788889999999999999984 34689999999754332 45799999999999 799999999
Q ss_pred EEEEcCCCeeEEEEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCC
Q 035786 574 GQCLEHETEKLLVYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDV 645 (693)
Q Consensus 574 g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDl 645 (693)
++|...+...++||||+++|+|.+++....... ......+++.++..++.+++.||+|||+. +|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccC
Confidence 998765556899999999999999998643210 00012389999999999999999999998 9999999
Q ss_pred CCCCeeeCCCCceEECCcccccccCCCCcc-eeeeeehhhhhhh
Q 035786 646 QASSILLDDKFEVRLGSLSELHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 646 k~~NILld~~~~~ki~Dfgla~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
||+||++++++.+||+|||+++........ ......+|+.|+|
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~a 218 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 218 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecC
Confidence 999999999999999999999987433222 2233455666655
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=236.17 Aligned_cols=155 Identities=20% Similarity=0.315 Sum_probs=120.8
Q ss_pred hCCCCccCccccCCeeeEEEEEeCC-C---cEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCe-
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAG-G---TTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETE- 582 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~-g---~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~- 582 (693)
.++|...+.||+|+||.||+|+... + ..||||.+.... ...++|.+|++++++++|||||++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 3468888999999999999999754 3 279999987542 2256799999999999999999999998754221
Q ss_pred ----eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 583 ----KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 583 ----~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
.++||||+++|+|.+++...... .....+++.++.+|+.+++.||+|||+. +|+||||||+||++++++.+
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIG--ENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC-----CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhcc--ccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 28999999999999999753211 1123589999999999999999999998 99999999999999999999
Q ss_pred EECCcccccccC
Q 035786 659 RLGSLSELHAQG 670 (693)
Q Consensus 659 ki~Dfgla~~~~ 670 (693)
||+|||+++...
T Consensus 177 kl~Dfg~a~~~~ 188 (323)
T 3qup_A 177 CVADFGLSRKIY 188 (323)
T ss_dssp EECCCCC-----
T ss_pred EEeecccccccc
Confidence 999999998863
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=258.06 Aligned_cols=165 Identities=17% Similarity=0.174 Sum_probs=139.2
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~ 584 (693)
.++|...++||+|+||.||+|+.. +++.||||++.... ...+.+..|.+++..+ +||||+++++++. .++..|
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~-~~~~~~ 418 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDRLY 418 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB-CSSEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE-eCCEEE
Confidence 456888899999999999999974 58899999997532 2346788999999988 7999999988665 456889
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+||||+++|+|.++++... .+++.++..|+.+|+.||+|||+. +||||||||+|||||+++.+||+|||
T Consensus 419 lV~E~~~gg~L~~~l~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFG 487 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG--------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFG 487 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCT
T ss_pred EEEeCcCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecc
Confidence 9999999999999998643 489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++........ ....+||++|+|
T Consensus 488 la~~~~~~~~~-~~~~~GT~~Y~A 510 (674)
T 3pfq_A 488 MCKENIWDGVT-TKTFCGTPDYIA 510 (674)
T ss_dssp TCEECCCTTCC-BCCCCSCSSSCC
T ss_pred eeeccccCCcc-cccccCCCcccC
Confidence 99975322221 344678888876
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-25 Score=230.38 Aligned_cols=166 Identities=15% Similarity=0.208 Sum_probs=134.7
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.|...+.||+|+||.||+|+. .+|..||||++..... ..+.+.+|++++.+++||||++++++|.+ ....++||||
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~ 101 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-YHNMYIVMET 101 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-CCeEEEEEEe
Confidence 477788999999999999996 4689999999875433 35789999999999999999999999875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCcccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLSEL 666 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfgla 666 (693)
+++|+|.+++..... ....+++..+.+|+.+++.||+|||.. +|+||||||+||++ +.++.+||+|||++
T Consensus 102 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 102 CEGGELLERIVSAQA----RGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp CSCCBHHHHHHHHHH----HTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred CCCCcHHHHHHhhhh----cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 999999999964311 113599999999999999999999998 99999999999999 45688999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....+|+.|+|
T Consensus 175 ~~~~~~~~--~~~~~~t~~y~a 194 (285)
T 3is5_A 175 ELFKSDEH--STNAAGTALYMA 194 (285)
T ss_dssp CC------------CTTGGGCC
T ss_pred eecCCccc--CcCcccccCcCC
Confidence 87643322 334567777765
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=255.59 Aligned_cols=140 Identities=20% Similarity=0.318 Sum_probs=125.3
Q ss_pred ccccCCeeeEEEEEeC---CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 519 LIKKGHSGDLFKGTLA---GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~---~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
.||+|+||.||+|.+. ++..||||+++.... ..++|.+|+++|++++|||||+++++|.. +..++|||||++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~--~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES--SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc--CCeEEEEEeCCCC
Confidence 6999999999999864 467899999976432 36789999999999999999999999864 4689999999999
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
+|.++++... ..++|.++..|+.||+.||+|||+. +||||||||+|||+++++.+||+|||+++...
T Consensus 421 ~L~~~l~~~~-------~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 421 PLHKFLVGKR-------EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp BHHHHHTTCT-------TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred cHHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 9999997532 3589999999999999999999998 99999999999999999999999999999874
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-25 Score=236.98 Aligned_cols=167 Identities=22% Similarity=0.311 Sum_probs=140.3
Q ss_pred HHHhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---------HHHHHHHHHHHhcC-CCCCccceeEEE
Q 035786 508 LRATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---------KESYMMELDLFSRV-SHARLVPLLGQC 576 (693)
Q Consensus 508 ~~at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---------~~~f~~Ei~~l~~l-~H~niv~l~g~~ 576 (693)
....++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 344556888899999999999999975 7999999998654321 34688999999999 799999999988
Q ss_pred EcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC
Q 035786 577 LEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF 656 (693)
Q Consensus 577 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~ 656 (693)
.. ....++||||+++|+|.+++... ..+++..+..++.+++.||.|||+. +|+||||||+||++++++
T Consensus 170 ~~-~~~~~lv~e~~~g~~L~~~l~~~--------~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~ 237 (365)
T 2y7j_A 170 ES-SSFMFLVFDLMRKGELFDYLTEK--------VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNM 237 (365)
T ss_dssp EB-SSEEEEEECCCTTCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTC
T ss_pred ee-CCEEEEEEEeCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCC
Confidence 75 46899999999999999999753 2489999999999999999999998 999999999999999999
Q ss_pred ceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 657 EVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 657 ~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+||+|||+++.+..... ....+||+.|+|
T Consensus 238 ~ikl~DfG~~~~~~~~~~--~~~~~gt~~y~a 267 (365)
T 2y7j_A 238 QIRLSDFGFSCHLEPGEK--LRELCGTPGYLA 267 (365)
T ss_dssp CEEECCCTTCEECCTTCC--BCCCCSCGGGCC
T ss_pred CEEEEecCcccccCCCcc--cccCCCCCCccC
Confidence 999999999988743322 233556666654
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-25 Score=228.92 Aligned_cols=165 Identities=17% Similarity=0.265 Sum_probs=131.3
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. .+|+.||||.+.... ...+.+.+|++++.+++||||+++++++.+ ++..++|
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 89 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED-SNYVYLV 89 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-SSEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-CCeEEEE
Confidence 4577788999999999999996 578999999996432 124679999999999999999999999875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... ..+++..+..++.++++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 90 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~ 159 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV-------KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLA 159 (278)
T ss_dssp EECCTTEEHHHHHHTCS-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTC
T ss_pred EecCCCCcHHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecce
Confidence 99999999999997532 3589999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ .....+|+.|+|
T Consensus 160 ~~~~~~~~~-~~~~~~~~~y~a 180 (278)
T 3cok_A 160 TQLKMPHEK-HYTLCGTPNYIS 180 (278)
T ss_dssp EECC------------------
T ss_pred eeccCCCCc-ceeccCCCCcCC
Confidence 886432221 223457777765
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8e-26 Score=234.15 Aligned_cols=147 Identities=24% Similarity=0.378 Sum_probs=128.3
Q ss_pred CCCccCccccCCeeeEEEEEeCC-C-------cEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG-G-------TTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~-g-------~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
+|...+.||+|+||.||+|+... + ..||+|.+...... .+.|.+|++++.+++|||||+++++|.+ ++..
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~ 87 (289)
T 4fvq_A 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC-GDEN 87 (289)
T ss_dssp GEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC-TTCC
T ss_pred HeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe-CCCC
Confidence 46677899999999999998642 3 57999998654433 5789999999999999999999999875 4678
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc------
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE------ 657 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~------ 657 (693)
++||||+++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNK-------NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTG-------GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred EEEEECCCCCCHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccc
Confidence 99999999999999997532 2489999999999999999999998 8999999999999998887
Q ss_pred --eEECCcccccccC
Q 035786 658 --VRLGSLSELHAQG 670 (693)
Q Consensus 658 --~ki~Dfgla~~~~ 670 (693)
+||+|||+++...
T Consensus 158 ~~~kl~Dfg~~~~~~ 172 (289)
T 4fvq_A 158 PFIKLSDPGISITVL 172 (289)
T ss_dssp CEEEECCCCSCTTTS
T ss_pred ceeeeccCccccccc
Confidence 9999999987763
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-25 Score=240.19 Aligned_cols=165 Identities=18% Similarity=0.226 Sum_probs=139.7
Q ss_pred HHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCC-----CCCccceeEEEEcCCCe
Q 035786 509 RATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-----HARLVPLLGQCLEHETE 582 (693)
Q Consensus 509 ~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-----H~niv~l~g~~~~~~~~ 582 (693)
...++|...+.||+|+||.||+|+. .+++.||||++.......+.+..|++++.+++ |||||++++++.. .+.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~-~~~ 110 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY-YDH 110 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE-TTE
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE-CCe
Confidence 3456788899999999999999997 56899999999754444567888999999997 9999999999876 468
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC--------
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-------- 654 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~-------- 654 (693)
.++||||+ +|+|.+++..... ..+++.+...++.|++.||+|||+. +|+||||||+|||+++
T Consensus 111 ~~lv~e~~-~~~L~~~~~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~ 180 (360)
T 3llt_A 111 MCLIFEPL-GPSLYEIITRNNY------NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLI 180 (360)
T ss_dssp EEEEECCC-CCBHHHHHHHTTT------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEE
T ss_pred eEEEEcCC-CCCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccccccccc
Confidence 89999999 9999999986432 3489999999999999999999998 9999999999999986
Q ss_pred -----------------CCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 655 -----------------KFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 655 -----------------~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++.+||+|||+++....... ...||+.|+|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~----~~~gt~~y~a 227 (360)
T 3llt_A 181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG----SIINTRQYRA 227 (360)
T ss_dssp EEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC----SCCSCGGGCC
T ss_pred chhcccccccccccccCCCCEEEEeccCceecCCCCc----CccCcccccC
Confidence 78999999999987644322 3456777765
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-25 Score=232.43 Aligned_cols=162 Identities=18% Similarity=0.237 Sum_probs=138.2
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
.|...+.||+|+||.||+|+.. +|+.||||.+..... ..++|.+|++++.+++||||+++++++.+ +...+
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~ 91 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDVV 91 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-CCEEE
Confidence 4777889999999999999974 689999999865322 25679999999999999999999999875 46889
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC----ceEE
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF----EVRL 660 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~----~~ki 660 (693)
+||||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++ .+||
T Consensus 92 lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl 160 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQK--------ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKL 160 (321)
T ss_dssp EEECCCCSCBHHHHHHTC--------SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred EEEEcCCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEE
Confidence 999999999999999753 3489999999999999999999998 999999999999999887 7999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++....... .....||+.|+|
T Consensus 161 ~Dfg~~~~~~~~~~--~~~~~gt~~y~a 186 (321)
T 2a2a_A 161 IDFGLAHEIEDGVE--FKNIFGTPEFVA 186 (321)
T ss_dssp CCCTTCEECCTTCC--CCCCCSCGGGCC
T ss_pred ccCccceecCcccc--ccccCCCCCccC
Confidence 99999998754322 233557777765
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-25 Score=227.89 Aligned_cols=156 Identities=21% Similarity=0.335 Sum_probs=132.3
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~l 585 (693)
.++|...+.||+|+||.||+|+.. +++.||||++..... ..+++.+|+..+.++ +|||||++++++.+ ++..++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~-~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE-DDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-TTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-CCeEEE
Confidence 345788899999999999999975 799999999875432 246788999999999 99999999999876 468899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-----------
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD----------- 654 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~----------- 654 (693)
||||+++|+|.+++..... ....+++.++..|+.|++.||+|||+. +|+||||||+||+++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~ 161 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYR----IMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEG 161 (289)
T ss_dssp EEECCTTCBHHHHHHHHHH----HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------------
T ss_pred EEEecCCCcHHHHHHhhcc----cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccc
Confidence 9999999999999975321 113589999999999999999999998 9999999999999984
Q ss_pred --------CCceEECCcccccccCCCCc
Q 035786 655 --------KFEVRLGSLSELHAQGDSHQ 674 (693)
Q Consensus 655 --------~~~~ki~Dfgla~~~~~~~~ 674 (693)
...+||+|||+++.......
T Consensus 162 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 189 (289)
T 1x8b_A 162 DEDDWASNKVMFKIGDLGHVTRISSPQV 189 (289)
T ss_dssp --------CCCEEECCCTTCEETTCSCC
T ss_pred ccccccCCceEEEEcccccccccCCccc
Confidence 45899999999998755443
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-25 Score=230.81 Aligned_cols=163 Identities=16% Similarity=0.231 Sum_probs=130.8
Q ss_pred CCc-cCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSE-TNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~-~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
|.. .++||+|+||.||+|+. .+++.||||++...... .+.+.+|++++.++ +|||||++++++.+ ++..++||||
T Consensus 14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-~~~~~lv~e~ 92 (316)
T 2ac3_A 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-EDRFYLVFEK 92 (316)
T ss_dssp CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-CCEEEEEEEc
Confidence 444 36899999999999995 47899999999754433 67899999999985 79999999999876 4689999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc---eEECCcccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE---VRLGSLSEL 666 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~---~ki~Dfgla 666 (693)
+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 93 ~~~~~L~~~l~~~~--------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 93 MRGGSILSHIHKRR--------HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp CTTCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred CCCCcHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 99999999997642 489999999999999999999998 9999999999999998776 999999999
Q ss_pred cccCCCC------cceeeeeehhhhhhh
Q 035786 667 HAQGDSH------QNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~------~~~~~~~~~~~~y~a 688 (693)
+...... .......+||+.|+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a 189 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMA 189 (316)
T ss_dssp C-------------------CCSGGGCC
T ss_pred cccccCCccccccccccccccCCcCccC
Confidence 8763211 111223457777765
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-25 Score=235.33 Aligned_cols=156 Identities=16% Similarity=0.314 Sum_probs=130.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC--------CCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA--------GGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHE 580 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~--------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~ 580 (693)
++|...+.||+|+||.||+|+.. ++..||||++...... .+++.+|++++.++ +||||++++++|.+ +
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~ 113 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-D 113 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc-C
Confidence 45777889999999999999863 4678999999754322 45799999999999 99999999999875 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
+..++||||+++|+|.+++....... ......++|.++.+++.+++.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 67899999999999999998643210 00123589999999999999999999998 99999999999999
Q ss_pred CCCCceEECCcccccccCC
Q 035786 653 DDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~~~ 671 (693)
++++.+||+|||+++....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~ 209 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINN 209 (334)
T ss_dssp CTTCCEEECCCTTCEECTT
T ss_pred cCCCCEEEccccccccccc
Confidence 9999999999999988743
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=242.77 Aligned_cols=160 Identities=18% Similarity=0.223 Sum_probs=125.5
Q ss_pred CCcc-CccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHh-cCCCCCccceeEEEEc---CCCeeEEEE
Q 035786 514 FSET-NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFS-RVSHARLVPLLGQCLE---HETEKLLVY 587 (693)
Q Consensus 514 ~~~~-~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~-~l~H~niv~l~g~~~~---~~~~~~lv~ 587 (693)
|... ++||+|+||.||+|... +|+.||||++.. ...+.+|++++. ..+|||||++++++.. .+...++||
T Consensus 63 y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~ 138 (400)
T 1nxk_A 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 138 (400)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred ceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEE
Confidence 4443 68999999999999864 689999999863 245778998874 4589999999998753 234578999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECCcc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~Dfg 664 (693)
|||++|+|.++++.... ..+++.++..|+.+|+.||+|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 139 E~~~gg~L~~~l~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 139 ECLDGGELFSRIQDRGD------QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp ECCCSEEHHHHHHCC---------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EeCCCCcHHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 99999999999975321 3599999999999999999999998 9999999999999998 7899999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... .+..+||++|+|
T Consensus 210 ~a~~~~~~~~--~~~~~gt~~y~a 231 (400)
T 1nxk_A 210 FAKETTSHNS--LTTPCYTPYYVA 231 (400)
T ss_dssp TCEECC-------------CTTCC
T ss_pred cccccCCCCc--cccCCCCCCccC
Confidence 9998643322 345677888876
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=8e-26 Score=238.07 Aligned_cols=158 Identities=22% Similarity=0.358 Sum_probs=132.7
Q ss_pred HHhCCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 035786 509 RATGNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHE 580 (693)
Q Consensus 509 ~at~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~ 580 (693)
.+.++|...+.||+|+||.||+|+.. +++.||||++...... .++|.+|++++.+++||||+++++++.+ +
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~ 100 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-G 100 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS-S
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc-C
Confidence 34566888899999999999999864 3678999999754322 4579999999999999999999999865 4
Q ss_pred CeeEEEEccCCCCChhhhhhccCCC--CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDL--EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~--~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
+..++||||+++|+|.++++..... .......+++..+.+++.+++.||+|||+. +|+||||||+||++++++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeE
Confidence 6789999999999999999753210 001123579999999999999999999998 99999999999999999999
Q ss_pred EECCcccccccC
Q 035786 659 RLGSLSELHAQG 670 (693)
Q Consensus 659 ki~Dfgla~~~~ 670 (693)
||+|||+++...
T Consensus 178 kl~Dfg~~~~~~ 189 (322)
T 1p4o_A 178 KIGDFGMTRDIY 189 (322)
T ss_dssp EECCTTCCCGGG
T ss_pred EECcCccccccc
Confidence 999999998763
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-25 Score=228.01 Aligned_cols=163 Identities=22% Similarity=0.342 Sum_probs=125.8
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc-----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF-----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~-----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. |+.||||++..... ..+.+.+|++++++++||||++++++|.+ ++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 84 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK-EPNLCLV 84 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC-C--CEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-CCceEEE
Confidence 35677889999999999999975 88999999864322 24679999999999999999999999875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC--------CCce
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD--------KFEV 658 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~--------~~~~ 658 (693)
|||+++|+|.+++.. ..+++..+..++.++++||+|||+....+|+||||||+||++++ ++.+
T Consensus 85 ~e~~~~~~L~~~~~~---------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~ 155 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG---------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKIL 155 (271)
T ss_dssp EECCTTEEHHHHHTS---------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred EEcCCCCCHHHHhhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcce
Confidence 999999999999853 34899999999999999999999984445999999999999996 6789
Q ss_pred EECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|||+++....... ....||+.|+|
T Consensus 156 kl~Dfg~~~~~~~~~~---~~~~~~~~y~a 182 (271)
T 3dtc_A 156 KITDFGLAREWHRTTK---MSAAGAYAWMA 182 (271)
T ss_dssp EECCCCC----------------CCGGGSC
T ss_pred EEccCCcccccccccc---cCCCCccceeC
Confidence 9999999987643322 12456666654
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.8e-26 Score=238.19 Aligned_cols=170 Identities=19% Similarity=0.344 Sum_probs=137.9
Q ss_pred HHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcC-----CC
Q 035786 509 RATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEH-----ET 581 (693)
Q Consensus 509 ~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~-----~~ 581 (693)
...+.|...+.||+|+||.||+|+. .+|+.||||.+.......+++.+|++++.++ +||||+++++++... +.
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 3566788889999999999999997 4689999999976665677899999999999 899999999998753 35
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++||||+++|+|.+++..... ..+++.....++.+++.||+|||.. +|+||||||+||++++++.+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTKG------NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSGG------GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred eEEEEEEcCCCCcHHHHHHhccc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEe
Confidence 68999999999999999975321 3589999999999999999999998 99999999999999999999999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++........ .....||+.|+|
T Consensus 172 Dfg~~~~~~~~~~~-~~~~~~~~~y~a 197 (326)
T 2x7f_A 172 DFGVSAQLDRTVGR-RNTFIGTPYWMA 197 (326)
T ss_dssp CCTTTC--------------CCGGGCC
T ss_pred eCcCceecCcCccc-cccccCCccccC
Confidence 99999876432211 223456666655
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6e-25 Score=226.94 Aligned_cols=163 Identities=19% Similarity=0.248 Sum_probs=137.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|... +|+.||||++...... .+.+.+|++++.+++||||+++++++.+ ++..++||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~ 84 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLVF 84 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-CCEEEEEE
Confidence 56777889999999999999964 6899999999754433 3578899999999999999999999875 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc---eEECCcc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE---VRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~---~ki~Dfg 664 (693)
||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.+.. +||+|||
T Consensus 85 e~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg 153 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR--------EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFG 153 (284)
T ss_dssp CCCCSCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCT
T ss_pred ecCCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeece
Confidence 999999999988754 2489999999999999999999998 9999999999999986655 9999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... .....||+.|+|
T Consensus 154 ~~~~~~~~~~--~~~~~~~~~y~a 175 (284)
T 3kk8_A 154 LAIEVNDSEA--WHGFAGTPGYLS 175 (284)
T ss_dssp TCEECCSSCB--CCCSCSCGGGCC
T ss_pred eeEEcccCcc--ccCCCCCcCCcC
Confidence 9988754333 233557777765
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-25 Score=228.68 Aligned_cols=162 Identities=24% Similarity=0.452 Sum_probs=133.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--------KESYMMELDLFSRVSHARLVPLLGQCLEHETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 582 (693)
++|...+.||+|+||.||+|+. .+++.||||++...... .++|.+|++++.+++||||+++++++.+ .
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~ 95 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN---P 95 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---T
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---C
Confidence 4577788999999999999997 47899999998643322 1679999999999999999999998753 3
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc-----
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE----- 657 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~----- 657 (693)
.++||||+++|+|.+++.... ..++|..+..++.+++.||+|||+. .++|+||||||+||+++.++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil~~~~~~~~~~~ 167 (287)
T 4f0f_A 96 PRMVMEFVPCGDLYHRLLDKA-------HPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVC 167 (287)
T ss_dssp TEEEEECCTTCBHHHHHHCTT-------SCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEEESCCCTTCSCC
T ss_pred CeEEEEecCCCCHHHHHhccc-------CCccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEEEeccCCCCcee
Confidence 479999999999999887532 3599999999999999999999987 223999999999999988776
Q ss_pred eEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 658 VRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 658 ~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+||+|||+++..... .....||+.|+|
T Consensus 168 ~kl~Dfg~~~~~~~~----~~~~~g~~~y~a 194 (287)
T 4f0f_A 168 AKVADFGLSQQSVHS----VSGLLGNFQWMA 194 (287)
T ss_dssp EEECCCTTCBCCSSC----EECCCCCCTTSC
T ss_pred EEeCCCCcccccccc----ccccCCCccccC
Confidence 999999999865332 223456666654
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.6e-25 Score=232.99 Aligned_cols=167 Identities=22% Similarity=0.361 Sum_probs=136.9
Q ss_pred HhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhc--CCCCCccceeEEEEcCC---CeeE
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSR--VSHARLVPLLGQCLEHE---TEKL 584 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~--l~H~niv~l~g~~~~~~---~~~~ 584 (693)
..++|...+.||+|+||.||+|+. +|+.||||++... ..+++.+|++++.. ++||||+++++++...+ ...+
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~ 116 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred ccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeE
Confidence 445688899999999999999998 4899999998643 34678889999887 79999999999987643 2689
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-----CCCeEecCCCCCCeeeCCCCceE
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC-----NPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~-----~p~iiHrDlk~~NILld~~~~~k 659 (693)
+||||+++|+|.+++++ ..++|.++.+++.+++.||+|||... ..+|+||||||+||++++++++|
T Consensus 117 lv~e~~~~g~L~~~l~~---------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 117 LVSDYHEHGSLFDYLNR---------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp EEECCCTTCBHHHHHHH---------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEE
T ss_pred EEEeecCCCcHHHHHhc---------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEE
Confidence 99999999999999975 24899999999999999999999311 22899999999999999999999
Q ss_pred ECCcccccccCCCCcc---eeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSHQN---VLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~~~---~~~~~~~~~~y~a 688 (693)
|+|||+++........ ......||+.|+|
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~a 219 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCC
T ss_pred EEECCCceeccccccccccccccCCcCcccCC
Confidence 9999999887433221 1233456777764
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-25 Score=232.03 Aligned_cols=166 Identities=19% Similarity=0.186 Sum_probs=132.9
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.++|...+.||+|+||.||+|+.. +++.||||.+...... .+.|.+|++++.+++||||+++++++.+ ++..++
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~l 111 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI-DGQLYV 111 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-CCeEEE
Confidence 356888899999999999999974 6899999999754322 3678999999999999999999999876 468899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... .+++.++..++.++++||+|||.. +|+||||||+||+++.++.+||+|||+
T Consensus 112 v~e~~~~~~L~~~l~~~~--------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~ 180 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG--------PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGI 180 (309)
T ss_dssp EEECCCCEEHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC
T ss_pred EEEecCCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCcc
Confidence 999999999999997532 489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++..............+++.|+|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~y~a 203 (309)
T 2h34_A 181 ASATTDEKLTQLGNTVGTLYYMA 203 (309)
T ss_dssp ----------------CCGGGCC
T ss_pred CccccccccccccccCCCcCccC
Confidence 98875443333344567777765
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-25 Score=230.99 Aligned_cols=146 Identities=23% Similarity=0.389 Sum_probs=126.4
Q ss_pred CCccCccccCCeeeEEEEEeC-C---CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLA-G---GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~-~---g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
|...++||+|+||.||+|+.. + +..||||++..... ..+.|.+|++++++++|||||+++++|.+.+...++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 344578999999999999853 2 33799999875332 24679999999999999999999999976544558999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+.+|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 103 e~~~~~~L~~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 172 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQ-------RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLAR 172 (298)
T ss_dssp CCCTTCBHHHHHHCTT-------CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSC
T ss_pred ecccCCCHHHHHhccc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcc
Confidence 9999999999997532 3589999999999999999999998 99999999999999999999999999998
Q ss_pred cc
Q 035786 668 AQ 669 (693)
Q Consensus 668 ~~ 669 (693)
..
T Consensus 173 ~~ 174 (298)
T 3pls_A 173 DI 174 (298)
T ss_dssp TT
T ss_pred cc
Confidence 76
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-25 Score=231.41 Aligned_cols=163 Identities=20% Similarity=0.385 Sum_probs=126.1
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+..+ .||||++...... .+.|.+|++++.+++||||+++++++. ....++|||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~lv~e 99 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--APQLAIVTQ 99 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEEE
T ss_pred cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc--CCccEEEEE
Confidence 457778899999999999998753 5999999754433 467999999999999999999999764 356899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 169 (289)
T 3og7_A 100 WCEGSSLYHHLHASE-------TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169 (289)
T ss_dssp CCCEEEHHHHHTTC----------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred ecCCCcHHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccc
Confidence 999999999996432 3589999999999999999999998 999999999999999999999999999987
Q ss_pred cCCC-Ccceeeeeehhhhhhh
Q 035786 669 QGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~-~~~~~~~~~~~~~y~a 688 (693)
.... .........||+.|+|
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~a 190 (289)
T 3og7_A 170 KSRWSGSHQFEQLSGSILWMA 190 (289)
T ss_dssp --------------CCCTTCC
T ss_pred cccccccccccccCCCccccC
Confidence 6321 1222333556777765
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-25 Score=229.11 Aligned_cols=163 Identities=18% Similarity=0.261 Sum_probs=134.2
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.++|...+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++++++||||++++++|.+ +...++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 86 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYL 86 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-CCEEEE
Confidence 345778889999999999999864 57899999985432 224678999999999999999999999875 467899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... .+++..+..++.+++.||+|||.. +|+||||||+||+++.++.+||+|||+
T Consensus 87 v~e~~~~~~l~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~ 155 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS--------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGW 155 (279)
T ss_dssp EECCCTTEEHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCE
T ss_pred EEecCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccc
Confidence 999999999999997542 489999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....+++.|+|
T Consensus 156 ~~~~~~~~---~~~~~~~~~y~a 175 (279)
T 3fdn_A 156 SVHAPSSR---RTDLCGTLDYLP 175 (279)
T ss_dssp ESCC-----------CCCCTTCC
T ss_pred cccCCccc---ccccCCCCCccC
Confidence 87653322 123455666654
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=237.20 Aligned_cols=162 Identities=18% Similarity=0.194 Sum_probs=131.8
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCCC--CCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSH--ARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~~lv~ 587 (693)
.|...+.||+|+||.||+|...+++.||||++...... .+.|.+|++++.+++| +|||++++++.+ +...++||
T Consensus 10 ~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv~ 88 (343)
T 3dbq_A 10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMVM 88 (343)
T ss_dssp EEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEE
T ss_pred EEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-CCEEEEEE
Confidence 46778899999999999999888999999998754333 3678999999999987 999999999875 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
| +.+|+|.+++... ..+++.++..|+.+++.||+|||+. +|+||||||+|||++ ++.+||+|||+++
T Consensus 89 e-~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~ 155 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKK--------KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIAN 155 (343)
T ss_dssp C-CCSEEHHHHHHHS--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred e-CCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccc
Confidence 9 5688999999763 3489999999999999999999998 999999999999997 6789999999999
Q ss_pred ccCCCCcc-eeeeeehhhhhhh
Q 035786 668 AQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~-~~~~~~~~~~y~a 688 (693)
........ ..+..+||++|+|
T Consensus 156 ~~~~~~~~~~~~~~~gt~~y~a 177 (343)
T 3dbq_A 156 QMQPDTTSVVKDSQVGTVNYMP 177 (343)
T ss_dssp CC------------CCCCSSCC
T ss_pred ccCcccccccCCCCcCCcCcCC
Confidence 87433221 2334556666665
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=229.94 Aligned_cols=163 Identities=24% Similarity=0.372 Sum_probs=135.6
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEc------------
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLE------------ 578 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~------------ 578 (693)
.+|...+.||+|+||.||+|+.. +|+.||||++.... +.+.+|++++.+++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 87 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS 87 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence 34778899999999999999975 79999999996543 457889999999999999999998743
Q ss_pred ---CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC
Q 035786 579 ---HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK 655 (693)
Q Consensus 579 ---~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~ 655 (693)
.....++||||+++|+|.++++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++++
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRG------EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158 (284)
T ss_dssp -CCEEEEEEEEECCCCSCBHHHHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEET
T ss_pred cccCcceEEEEEeccCCCCHHHHHhhccC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCC
Confidence 12346899999999999999975321 3589999999999999999999998 99999999999999999
Q ss_pred CceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 656 FEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 656 ~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+.+||+|||+++....... .....+++.|+|
T Consensus 159 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~a 189 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMS 189 (284)
T ss_dssp TEEEECCCTTCEESSCCSC--CCCCCSCCTTSC
T ss_pred CCEEECcchhheecccccc--ccccCCcccccC
Confidence 9999999999988744322 223345666654
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=240.48 Aligned_cols=167 Identities=16% Similarity=0.155 Sum_probs=133.3
Q ss_pred hCCCCccCccccCCeeeEEEEEeCC------CcEEEEEEecccccC------------HHHHHHHHHHHhcCCCCCccce
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSFK------------KESYMMELDLFSRVSHARLVPL 572 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~------g~~vavK~l~~~~~~------------~~~f~~Ei~~l~~l~H~niv~l 572 (693)
.++|...+.||+|+||.||+|...+ ++.||||.+...... .+.+..|+..+..++|||||++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4467888999999999999998754 478999998654311 1235567778888999999999
Q ss_pred eEEEEcCC---CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCC
Q 035786 573 LGQCLEHE---TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASS 649 (693)
Q Consensus 573 ~g~~~~~~---~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~N 649 (693)
+++|.... ...++||||+ +|+|.+++.... ..++|.++..|+.|++.||+|||+. +|+||||||+|
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~-------~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~N 182 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA-------KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASN 182 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHH
Confidence 99987531 2478999999 999999997532 3599999999999999999999998 99999999999
Q ss_pred eeeC--CCCceEECCcccccccCCCCcc------eeeeeehhhhhhh
Q 035786 650 ILLD--DKFEVRLGSLSELHAQGDSHQN------VLTRFLWRQLYQS 688 (693)
Q Consensus 650 ILld--~~~~~ki~Dfgla~~~~~~~~~------~~~~~~~~~~y~a 688 (693)
||++ .++.+||+|||+++.+...... ......||+.|+|
T Consensus 183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~a 229 (364)
T 3op5_A 183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTS 229 (364)
T ss_dssp EEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCC
T ss_pred EEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccC
Confidence 9999 8899999999999887332111 1233558888876
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-25 Score=226.82 Aligned_cols=165 Identities=17% Similarity=0.255 Sum_probs=137.9
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+.. +|+.||||.+...... .+.+.+|++++.+++||||+++++++.+ ++..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 85 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFLE 85 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-CCEEEEEEE
Confidence 34777889999999999999975 6899999998654322 5679999999999999999999999876 467899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 86 ~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 154 (276)
T 2yex_A 86 YCSGGELFDRIEPD--------IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATV 154 (276)
T ss_dssp CCTTEEGGGGSBTT--------TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred ecCCCcHHHHHhhc--------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccc
Confidence 99999999998642 3489999999999999999999998 999999999999999999999999999987
Q ss_pred cCCC-Ccceeeeeehhhhhhh
Q 035786 669 QGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~-~~~~~~~~~~~~~y~a 688 (693)
.... .........|++.|+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~a 175 (276)
T 2yex_A 155 FRYNNRERLLNKMCGTLPYVA 175 (276)
T ss_dssp CEETTEECCBCCCCSCGGGCC
T ss_pred cCCCcchhcccCCccccCccC
Confidence 6321 1111233456666654
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=236.47 Aligned_cols=163 Identities=19% Similarity=0.334 Sum_probs=130.0
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|...+.||+|+||.||+|+.. +++.||||++...... ...+.+|++++.+++|||||++++++.+ ++..++||||
T Consensus 3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 81 (324)
T 3mtl_A 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-EKSLTLVFEY 81 (324)
T ss_dssp SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-SSCEEEEEEC
T ss_pred ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee-CCEEEEEecc
Confidence 4667789999999999999975 6899999998654322 2356689999999999999999999875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
++ |+|.+++.... ..+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 82 ~~-~~l~~~~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 150 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG-------NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAK 150 (324)
T ss_dssp CS-EEHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC
T ss_pred cc-cCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccc
Confidence 98 69999987543 3589999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
...... .....+|++|+|
T Consensus 151 ~~~~~~-~~~~~~t~~y~a 168 (324)
T 3mtl_A 151 SIPTKT-YDNEVVTLWYRP 168 (324)
T ss_dssp -------------CGGGCC
T ss_pred cCCccc-cccccCcccccC
Confidence 433222 333566777765
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.92 E-value=5.5e-25 Score=227.14 Aligned_cols=162 Identities=17% Similarity=0.260 Sum_probs=134.6
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
+|...+.||+|+||.||+|+.. +|+.||||.+..... ..+.|.+|++++.+++||||+++++++.+ +...+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-KTDVV 84 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC-CCeEE
Confidence 4677889999999999999975 689999999865321 25689999999999999999999999875 46789
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC----ceEE
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF----EVRL 660 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~----~~ki 660 (693)
+||||+++|+|.+++... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++ .+||
T Consensus 85 lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl 153 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK--------ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKL 153 (283)
T ss_dssp EEEECCCSCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEE
T ss_pred EEEeecCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEE
Confidence 999999999999999753 2489999999999999999999998 999999999999999877 8999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++....... .....+++.|+|
T Consensus 154 ~dfg~~~~~~~~~~--~~~~~~~~~y~a 179 (283)
T 3bhy_A 154 IDFGIAHKIEAGNE--FKNIFGTPEFVA 179 (283)
T ss_dssp CCCTTCEECC----------CCCGGGCC
T ss_pred EecccceeccCCCc--ccccCCCcCccC
Confidence 99999988744322 233456666654
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-25 Score=235.74 Aligned_cols=169 Identities=16% Similarity=0.206 Sum_probs=138.2
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC------------------HHHHHHHHHHHhcCCCCCcccee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK------------------KESYMMELDLFSRVSHARLVPLL 573 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~------------------~~~f~~Ei~~l~~l~H~niv~l~ 573 (693)
++|...+.||+|+||.||+|+. +|+.||||++...... .+.|.+|++++.+++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4577888999999999999999 8999999998643211 17899999999999999999999
Q ss_pred EEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc-CCCCCeEecCCCCCCeee
Q 035786 574 GQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH-ECNPPLVHRDVQASSILL 652 (693)
Q Consensus 574 g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~-~~~p~iiHrDlk~~NILl 652 (693)
+++.+ ++..++||||+++|+|.+++.............+++..+..++.+++.||+|||+ . +|+||||||+||++
T Consensus 110 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 110 GIITN-YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp EEEES-SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEee-CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 99876 4688999999999999999432111111112569999999999999999999998 6 89999999999999
Q ss_pred CCCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 653 DDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+.++.+||+|||+++..... ......+++.|+|
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~a 218 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMP 218 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCC
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccC
Confidence 99999999999999886433 1233456666654
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-25 Score=228.53 Aligned_cols=164 Identities=17% Similarity=0.221 Sum_probs=136.4
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +++.||+|.+..... ..+.+.+|++++++++||||+++++++.+ ++..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 93 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFVV 93 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-CCEEEEE
Confidence 34677889999999999999975 588999999865422 24678999999999999999999999875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++... ..+++.++..++.++++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 94 ~e~~~~~~L~~~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 162 (294)
T 2rku_A 94 LELCRRRSLLELHKRR--------KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 162 (294)
T ss_dssp EECCTTCBHHHHHHHH--------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCc
Confidence 9999999999998753 2489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ .....||+.|+|
T Consensus 163 ~~~~~~~~~-~~~~~~~~~y~a 183 (294)
T 2rku_A 163 TKVEYDGER-KKVLCGTPNYIA 183 (294)
T ss_dssp EECCSTTCC-BCCCCSCCSSCC
T ss_pred eecccCccc-cccccCCCCcCC
Confidence 886422211 222445555543
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-25 Score=229.67 Aligned_cols=165 Identities=21% Similarity=0.320 Sum_probs=132.2
Q ss_pred CCCCccCccccCCeeeEEEEEeCC----CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...+.||+|+||.||+|+..+ +..||||.+..... ..+.|.+|++++++++||||+++++++.+ +..++
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~ 89 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE--EPTWI 89 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS--SSCEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCCEE
Confidence 457778899999999999998643 34699999875432 25679999999999999999999998753 46799
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..+++..+..++.++++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 90 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 159 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK-------NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGL 159 (281)
T ss_dssp EEECCTTCBHHHHHHHHT-------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCG
T ss_pred EEecCCCCCHHHHHHhcc-------ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCC
Confidence 999999999999997543 3489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++..............+++.|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~y~a 182 (281)
T 3cc6_A 160 SRYIEDEDYYKASVTRLPIKWMS 182 (281)
T ss_dssp GGCC---------CCCCCGGGCC
T ss_pred CcccccccccccccCCCCcceeC
Confidence 99874433222223334445543
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.8e-24 Score=221.29 Aligned_cols=199 Identities=28% Similarity=0.300 Sum_probs=96.2
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|+.+++++|.++ .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..+ . ..+++|++|+
T Consensus 9 l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCCEEE
T ss_pred cCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCCEEE
Confidence 444455555555444 2333332 344555555555554444455555555555555555543211 1 3444455555
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|.++ .+|..+..+++|++|++++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+++
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~- 161 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT- 161 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS-
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC-
Confidence 5555544 34444455555555555555555444445555555555555555555444444444444444444444444
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcC
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNI 323 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l 323 (693)
.+|...|..+++|+.|+|++|+++ .+|..+...++|+.|+|++|.+
T Consensus 162 ~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 162 ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred ccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 233344444555555555555554 3344444444444444444444
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.6e-25 Score=233.29 Aligned_cols=164 Identities=17% Similarity=0.221 Sum_probs=137.3
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
.+|...+.||+|+||.||+++.. +++.||+|.+..... ..+.|.+|++++.+++||||+++++++.+ ++..++|
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 119 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFVV 119 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEEE
Confidence 45777889999999999999975 588999999865422 24678999999999999999999999875 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 120 ~e~~~~~~L~~~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 188 (335)
T 2owb_A 120 LELCRRRSLLELHKRR--------KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 188 (335)
T ss_dssp ECCCTTCBHHHHHHHH--------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCc
Confidence 9999999999998753 2489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ .....||+.|+|
T Consensus 189 ~~~~~~~~~-~~~~~gt~~y~a 209 (335)
T 2owb_A 189 TKVEYDGER-KKVLCGTPNYIA 209 (335)
T ss_dssp EECCSTTCC-BCCCCSCCSSCC
T ss_pred eecccCccc-ccccCCCccccC
Confidence 886422211 223445555554
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.5e-25 Score=246.01 Aligned_cols=164 Identities=18% Similarity=0.287 Sum_probs=137.0
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc--------------cCHHHHHHHHHHHhcCCCCCccceeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS--------------FKKESYMMELDLFSRVSHARLVPLLGQ 575 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~--------------~~~~~f~~Ei~~l~~l~H~niv~l~g~ 575 (693)
.+.|...+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++.+++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 456888899999999999999974 58899999986532 124678999999999999999999999
Q ss_pred EEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC
Q 035786 576 CLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK 655 (693)
Q Consensus 576 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~ 655 (693)
|.+ +...++||||+++|+|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++.+
T Consensus 115 ~~~-~~~~~lv~e~~~gg~L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~ 182 (504)
T 3q5i_A 115 FED-KKYFYLVTEFYEGGELFEQIINR--------HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENK 182 (504)
T ss_dssp EEC-SSEEEEEEECCTTCBHHHHHHHH--------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESST
T ss_pred EEc-CCEEEEEEecCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecC
Confidence 875 46889999999999999999754 2489999999999999999999998 99999999999999977
Q ss_pred C---ceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 656 F---EVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 656 ~---~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+ .+||+|||+++....... ....+||++|+|
T Consensus 183 ~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~a 216 (504)
T 3q5i_A 183 NSLLNIKIVDFGLSSFFSKDYK--LRDRLGTAYYIA 216 (504)
T ss_dssp TCCSSEEECCCTTCEECCTTSC--BCCCCSCTTTCC
T ss_pred CCCccEEEEECCCCEEcCCCCc--cccccCCcCCCC
Confidence 5 699999999998754332 344568888875
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.3e-25 Score=239.17 Aligned_cols=162 Identities=18% Similarity=0.181 Sum_probs=133.7
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCC--CCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVS--HARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.|...+.||+|+||.||+|...+++.||||++...... .+.|.+|++++.+++ |||||++++++.. ++..++||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv~ 135 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMVM 135 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-CCEEEEEE
Confidence 37778899999999999999888999999999654332 467999999999996 5999999999876 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
| +.+|+|.+++.... .+++.++..|+.+|+.||+|||.. +|+||||||+|||++ ++.+||+|||+++
T Consensus 136 E-~~~~~L~~~l~~~~--------~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~ 202 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIAN 202 (390)
T ss_dssp E-CCSEEHHHHHHHCS--------SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSC
T ss_pred e-cCCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccc
Confidence 9 56889999997532 488999999999999999999998 999999999999996 5899999999999
Q ss_pred ccCCCCc-ceeeeeehhhhhhh
Q 035786 668 AQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~-~~~~~~~~~~~y~a 688 (693)
....... ......+||++|+|
T Consensus 203 ~~~~~~~~~~~~~~~gt~~y~a 224 (390)
T 2zmd_A 203 QMQPDTTSVVKDSQVGAVNYMP 224 (390)
T ss_dssp CC---------CCSCCCGGGCC
T ss_pred cccCCCccccCCCCCcCCCccC
Confidence 8743322 12344568888876
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.5e-25 Score=234.80 Aligned_cols=166 Identities=23% Similarity=0.359 Sum_probs=136.8
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC-------C
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH-------E 580 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-------~ 580 (693)
++|...+.||+|+||.||+|+. .+|+.||||++...... ...+.+|++++.+++|||||+++++|... +
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 4577788999999999999997 57899999998653322 45788999999999999999999998753 2
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
+..++||||+++ +|.+.+.... ..+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl 165 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL-------VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKL 165 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred ceEEEEEeccCC-CHHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEE
Confidence 357899999984 7887776432 3489999999999999999999998 9999999999999999999999
Q ss_pred CCcccccccCC---CCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGD---SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~---~~~~~~~~~~~~~~y~a 688 (693)
+|||+++.+.. ......+...||++|+|
T Consensus 166 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a 196 (351)
T 3mi9_A 166 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRP 196 (351)
T ss_dssp CCCTTCEECCCCSSSSCCCCCSSCSCGGGCC
T ss_pred ccchhcccccccccccccccCCcccccCccC
Confidence 99999988632 12222344567888876
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.8e-25 Score=233.62 Aligned_cols=146 Identities=21% Similarity=0.375 Sum_probs=123.5
Q ss_pred CCccCccccCCeeeEEEEEeCC-----CcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTLAG-----GTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~-----g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
|...+.||+|+||.||+|+... +..||||++..... ..++|.+|++++.+++|||||++++++.+ .+..++|
T Consensus 46 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 124 (333)
T 1mqb_A 46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-YKPMMII 124 (333)
T ss_dssp EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEE
T ss_pred hhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec-CCCcEEE
Confidence 4446889999999999998642 24699999975432 24579999999999999999999999865 4678999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++... ..+++.++..++.++++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 125 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 125 TEYMENGALDKFLREKD-------GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLS 194 (333)
T ss_dssp EECCTTEEHHHHHHHTT-------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred EeCCCCCcHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcc
Confidence 99999999999997532 3589999999999999999999998 8999999999999999999999999999
Q ss_pred cccC
Q 035786 667 HAQG 670 (693)
Q Consensus 667 ~~~~ 670 (693)
+...
T Consensus 195 ~~~~ 198 (333)
T 1mqb_A 195 RVLE 198 (333)
T ss_dssp ----
T ss_pred hhhc
Confidence 9874
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-25 Score=233.70 Aligned_cols=162 Identities=22% Similarity=0.365 Sum_probs=127.2
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|+.. ++.||||++... ...+.|.+|++++++++|||||+++++|. +..++||||+++
T Consensus 9 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---~~~~lv~e~~~~ 83 (307)
T 2eva_A 9 EIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACL---NPVCLVMEYAEG 83 (307)
T ss_dssp GEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCT---TTTEEEEECCTT
T ss_pred HeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEc---CCcEEEEEcCCC
Confidence 4667789999999999999985 788999998643 23567999999999999999999999875 347999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc-eEECCcccccccCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE-VRLGSLSELHAQGD 671 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~-~ki~Dfgla~~~~~ 671 (693)
|+|.++++.... ...+++..+..++.++++||+|||+....+|+||||||+||++++++. +||+|||+++....
T Consensus 84 ~~L~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 84 GSLYNVLHGAEP-----LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp CBHHHHHHCSSS-----EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred CCHHHHHhccCC-----CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 999999975432 134789999999999999999999843338999999999999998876 79999999987633
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
.. +...||+.|+|
T Consensus 159 ~~----~~~~gt~~y~a 171 (307)
T 2eva_A 159 HM----TNNKGSAAWMA 171 (307)
T ss_dssp ----------CCTTSSC
T ss_pred cc----ccCCCCCceEC
Confidence 22 22345666654
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=226.07 Aligned_cols=165 Identities=18% Similarity=0.247 Sum_probs=134.5
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
+....+||+|+||.||+|+. .+++.||||++...... .+.+.+|++++.+++|||||++++++.+ ++..++||||++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~ 102 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-NGFIKIFMEQVP 102 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECCS
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-CCcEEEEEEeCC
Confidence 55667999999999999996 56889999999764433 5679999999999999999999999876 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-CCceEECCcccccccC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-KFEVRLGSLSELHAQG 670 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~-~~~~ki~Dfgla~~~~ 670 (693)
+|+|.++++.... ...+++..+..++.+++.||+|||.. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 103 ~~~L~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 103 GGSLSALLRSKWG-----PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp EEEHHHHHHHTTC-----CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred CCCHHHHHHhhcc-----CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 9999999976422 13478999999999999999999998 9999999999999997 8999999999998864
Q ss_pred CCCcceeeeeehhhhhhh
Q 035786 671 DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~~~~~~~~~~y~a 688 (693)
..... .....|++.|+|
T Consensus 175 ~~~~~-~~~~~~~~~y~a 191 (295)
T 2clq_A 175 GINPC-TETFTGTLQYMA 191 (295)
T ss_dssp C------CCCCCCGGGCC
T ss_pred CCCCc-ccccCCCccccC
Confidence 32211 223445666654
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=237.56 Aligned_cols=176 Identities=16% Similarity=0.139 Sum_probs=135.8
Q ss_pred HHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc------cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCC
Q 035786 509 RATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS------FKKESYMMELDLFSRVSHARLVPLLGQCLEHET 581 (693)
Q Consensus 509 ~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~------~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~ 581 (693)
...++|...+.||+|+||.||+|+. .+++.||||++.... ...+.|.+|++++.+++|||||+++++|.+ ++
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~ 101 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED-EQ 101 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SS
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-CC
Confidence 3455688899999999999999997 468899999986432 224679999999999999999999999875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCC--------------------------------CCCCCCCCHHHHHHHHHHHHHHH
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLE--------------------------------DDSLQSLDWITRLKIAIGAAEGL 629 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~--------------------------------~~~~~~l~~~~r~~ia~~ia~gl 629 (693)
..++||||+++|+|.+++....... ......+++.....|+.+++.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 7899999999999999996311000 00011245677888999999999
Q ss_pred hhhccCCCCCeEecCCCCCCeeeCCCC--ceEECCcccccccCC---CCcceeeeeehhhhhhh
Q 035786 630 SYLHHECNPPLVHRDVQASSILLDDKF--EVRLGSLSELHAQGD---SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 630 ~yLH~~~~p~iiHrDlk~~NILld~~~--~~ki~Dfgla~~~~~---~~~~~~~~~~~~~~y~a 688 (693)
+|||.. +|+||||||+||+++.+. .+||+|||+++.... ..........||+.|+|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a 242 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVA 242 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCC
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccC
Confidence 999998 899999999999998776 899999999987632 22112344667777776
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=227.42 Aligned_cols=163 Identities=25% Similarity=0.376 Sum_probs=138.8
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+.|...+.||+|+||.||+|+. .+++.||||.+.... ...+.+.+|++++.+++||||+++++++.+ +...++|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 100 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLWIIME 100 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeEEEEEE
Confidence 3477788999999999999986 468999999997543 235789999999999999999999999876 468899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.+++.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 101 ~~~~~~L~~~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~ 168 (303)
T 3a7i_A 101 YLGGGSALDLLEP---------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQ 168 (303)
T ss_dssp CCTTEEHHHHHTT---------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eCCCCcHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeeccccee
Confidence 9999999999864 3489999999999999999999998 999999999999999999999999999988
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
....... .....|++.|+|
T Consensus 169 ~~~~~~~-~~~~~~~~~y~a 187 (303)
T 3a7i_A 169 LTDTQIK-RNTFVGTPFWMA 187 (303)
T ss_dssp CBTTBCC-BCCCCSCGGGCC
T ss_pred cCccccc-cCccCCCcCccC
Confidence 7443221 233456666655
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-25 Score=230.57 Aligned_cols=155 Identities=23% Similarity=0.395 Sum_probs=124.0
Q ss_pred hCCCCccCccccCCeeeEEEEEeC----CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCC--
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA----GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHET-- 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~----~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-- 581 (693)
.++|...+.||+|+||.||+|+.. .+..||||++...... .+.|.+|++++.+++||||++++++|.+.+.
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 345777889999999999999863 3458999998754333 3579999999999999999999999975432
Q ss_pred --eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceE
Q 035786 582 --EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 582 --~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~k 659 (693)
..++||||+++|+|.+++..... ......+++.++..++.++++||.|||.. +|+||||||+||++++++.+|
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRL--ETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTB--TTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred CcccEEEEecccCCCHHHHHHHhhh--hcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 34899999999999999964321 11224699999999999999999999998 999999999999999999999
Q ss_pred ECCcccccccC
Q 035786 660 LGSLSELHAQG 670 (693)
Q Consensus 660 i~Dfgla~~~~ 670 (693)
|+|||+++...
T Consensus 188 l~Dfg~~~~~~ 198 (313)
T 3brb_A 188 VADFGLSKKIY 198 (313)
T ss_dssp ECSCSCC----
T ss_pred EeecCcceecc
Confidence 99999998763
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-27 Score=261.62 Aligned_cols=284 Identities=20% Similarity=0.182 Sum_probs=145.5
Q ss_pred cccCCCCCEEEccCCCCCC----cCchHhhhCCCCccEEEecCCCCCcCCCccc-CCCc----cCCEEecccCcCCc---
Q 035786 89 LGNLTLLSSFNASGLSLPG----SIPEWFGYRLPALQVLDLRSCSLSGSIPGSF-GNLS----RLNVLYLSGNSLAG--- 156 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g----~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~-~~l~----~L~~L~Ls~N~l~~--- 156 (693)
+..+++|+.|++++|.+.. .+|..+. .+++|++|+|++|.+++..+..+ ..++ +|++|+|++|.++.
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~-~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~ 102 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALR-VNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGC 102 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHH-TCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGH
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHH-hCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHH
Confidence 3455566666666666553 2344443 25666666666666554322222 1233 46666666666652
Q ss_pred -cCccccCCCCCCCEEEccCCCCCCcCchhhhc-----CcCCCeeecccccCCCc----CcccccCCCCCCEEEccCCcc
Q 035786 157 -NVPATLGELKKLSNLDLSRNLLTGEIPNAISL-----LGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNAL 226 (693)
Q Consensus 157 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l 226 (693)
.+|..+..+++|++|+|++|.+++..+..+.. .++|++|++++|.+++. ++..+..+++|+.|++++|.+
T Consensus 103 ~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i 182 (461)
T 1z7x_W 103 GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDI 182 (461)
T ss_dssp HHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBC
T ss_pred HHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCc
Confidence 34555666666666666666655433333222 34566666666666542 234444556666666666665
Q ss_pred cccCCcccc-----CCCCCCEEEccCCcCccc----CchhhhcCcccccccccccccccc----CCCcccCCCCCCCEEE
Q 035786 227 TGFIPSEVG-----NLDKLIELDLSKNSISGS----LPLELRGLRNLAKLVISENGLEGQ----LSEGLFPTLDQLQVVD 293 (693)
Q Consensus 227 ~g~~p~~~~-----~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----i~~~~~~~l~~L~~L~ 293 (693)
+...+..+. ..++|++|++++|.+++. ++..+..+++|++|++++|.+++. +.+.++..+++|+.|+
T Consensus 183 ~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~ 262 (461)
T 1z7x_W 183 NEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLW 262 (461)
T ss_dssp HHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred chHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEE
Confidence 543332222 234566666666666543 355555566666666666655432 1122233455666666
Q ss_pred ccCCcCCCc----CcccccCCCCCCEEEccCCcCcccCCc----cCcCCCCCCcEEEccCCcccee----cCC--CCCCC
Q 035786 294 LSGNKLDGA----LPATLFLRPNLRFLDLSRNNITGSWPI----LSTNGNASGAVFNISNNMLYGD----LNS--SSFRK 359 (693)
Q Consensus 294 Ls~N~l~g~----~p~~l~~~~~L~~L~Ls~N~l~g~~p~----~~~~~~~~l~~l~ls~N~l~g~----~~~--~~~~~ 359 (693)
+++|+++.. ++..+..+++|+.|++++|++++..+. ......+.|+.|++++|.+++. ++. ..+++
T Consensus 263 L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~ 342 (461)
T 1z7x_W 263 IWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRF 342 (461)
T ss_dssp CTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSS
T ss_pred CcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCC
Confidence 666666543 444555556666666666665432111 1111223555666666655543 111 12345
Q ss_pred CCEEEccCCcceee
Q 035786 360 FSLIDLSSNYFQGT 373 (693)
Q Consensus 360 l~~ldLs~N~l~g~ 373 (693)
|+.|||++|.+++.
T Consensus 343 L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 343 LLELQISNNRLEDA 356 (461)
T ss_dssp CCEEECCSSBCHHH
T ss_pred ccEEEccCCccccc
Confidence 55556665555543
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.9e-25 Score=245.17 Aligned_cols=162 Identities=15% Similarity=0.249 Sum_probs=134.7
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
.|...+.||+|+||.||+|+.. ++..||||++.... ...+.+.+|++++++++|||||+++++|.+ +...++|||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e 116 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-KRNYYLVME 116 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEEEe
Confidence 4777889999999999999974 68899999987543 225679999999999999999999999875 468899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECCccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGSLSE 665 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~Dfgl 665 (693)
|+++|+|.+++... ..+++.....|+.+++.||+|||+. +|+||||||+|||++. ++.+||+|||+
T Consensus 117 ~~~~g~L~~~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~ 185 (494)
T 3lij_A 117 CYKGGELFDEIIHR--------MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGL 185 (494)
T ss_dssp CCCSCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred cCCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCC
Confidence 99999999988754 2489999999999999999999998 9999999999999976 45599999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... ....+||++|+|
T Consensus 186 a~~~~~~~~--~~~~~gt~~y~a 206 (494)
T 3lij_A 186 SAVFENQKK--MKERLGTAYYIA 206 (494)
T ss_dssp CEECBTTBC--BCCCCSCTTTCC
T ss_pred CeECCCCcc--ccccCCCcCeeC
Confidence 998754332 344678888876
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.9e-25 Score=235.57 Aligned_cols=166 Identities=20% Similarity=0.356 Sum_probs=132.6
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCe
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK------KESYMMELDLFSRVSHARLVPLLGQCLEHETE 582 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~ 582 (693)
..++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++|||||++++++.+ +..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~ 86 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-KSN 86 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC-TTC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee-CCc
Confidence 3456888999999999999999974 6899999998643221 2468899999999999999999998865 467
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||+++ +|.+++.... ..+++..+..++.++++||+|||+. +|+||||||+||++++++.+||+|
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~D 155 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS-------LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLAD 155 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC-------SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred eEEEEEcCCC-CHHHHHHhcC-------cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEe
Confidence 8999999985 8988886432 3588899999999999999999998 899999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++........ .+..++|++|+|
T Consensus 156 fg~a~~~~~~~~~-~~~~~~t~~y~a 180 (346)
T 1ua2_A 156 FGLAKSFGSPNRA-YTHQVVTRWYRA 180 (346)
T ss_dssp CGGGSTTTSCCCC-CCCSCCCCTTCC
T ss_pred cccceeccCCccc-CCcccccccccC
Confidence 9999987443221 333556777765
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-25 Score=239.56 Aligned_cols=166 Identities=15% Similarity=0.215 Sum_probs=130.5
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCC--------
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHE-------- 580 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-------- 580 (693)
..++|...+.||+|+||.||+|+. .+|+.||||++..... .+.+|++++++++|||||+++++|....
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence 456788889999999999999986 5799999999865432 2346999999999999999999986432
Q ss_pred -----------------------------CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 035786 581 -----------------------------TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631 (693)
Q Consensus 581 -----------------------------~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~y 631 (693)
...++||||++ |+|.+.++.... ....+++.....++.|+++||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR----SGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp ----------------------------CCEEEEEECCCS-EEHHHHHHHHHH----TTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHH
Confidence 23779999999 688888764211 11459999999999999999999
Q ss_pred hccCCCCCeEecCCCCCCeeeC-CCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 632 LHHECNPPLVHRDVQASSILLD-DKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 632 LH~~~~p~iiHrDlk~~NILld-~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+. +|+||||||+|||++ +++.+||+|||+++....... .....+|++|+|
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~a 209 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRA 209 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCC
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccC
Confidence 9988 999999999999998 689999999999997633322 222345555554
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-25 Score=230.25 Aligned_cols=149 Identities=24% Similarity=0.404 Sum_probs=125.0
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|+.. |+.||||.+.... ..+.|.+|++++.+++||||+++++++.+.++..++||||++
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 98 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence 34777889999999999999875 8899999987543 456799999999999999999999998765557899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++..... ..+++..+.+++.+++.||+|||.. +|+||||||+||++++++.+||+|||+++....
T Consensus 99 ~~~L~~~l~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 99 KGSLVDYLRSRGR------SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp TEEHHHHHHHHHH------HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred CCCHHHHHHhccc------ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 9999999975321 2388999999999999999999998 999999999999999999999999999987643
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=225.67 Aligned_cols=163 Identities=18% Similarity=0.297 Sum_probs=133.3
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC---CCeeEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH---ETEKLLV 586 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~---~~~~~lv 586 (693)
|...+.||+|+||.||+|.. .++..||+|++...... .+.|.+|++++.+++|||||++++++... +...++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 44566899999999999987 45889999998754332 46799999999999999999999987642 2357899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CCCceEECCccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DKFEVRLGSLSE 665 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~~~~ki~Dfgl 665 (693)
|||+++|+|.+++... ..+++..+..++.+++.||+|||+. .++|+||||||+||+++ +++.+||+|||+
T Consensus 108 ~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRF--------KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EECCCSCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEecCCCCHHHHHHHc--------cCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999753 2489999999999999999999987 23499999999999998 789999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... ....||+.|+|
T Consensus 179 ~~~~~~~~~---~~~~~t~~y~a 198 (290)
T 1t4h_A 179 ATLKRASFA---KAVIGTPEFMA 198 (290)
T ss_dssp GGGCCTTSB---EESCSSCCCCC
T ss_pred ccccccccc---ccccCCcCcCC
Confidence 987643322 23445666654
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.4e-25 Score=231.86 Aligned_cols=149 Identities=21% Similarity=0.393 Sum_probs=129.4
Q ss_pred CCCccCccccCCeeeEEEEEe-----CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCC-CeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-----AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHE-TEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-----~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~~l 585 (693)
+|...+.||+|+||.||+|++ .+|+.||||++...... .+.|.+|++++.+++||||++++++|...+ ...++
T Consensus 42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 121 (326)
T 2w1i_A 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 121 (326)
T ss_dssp GEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEE
T ss_pred HceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEE
Confidence 466678999999999999984 35889999999764333 467999999999999999999999987532 35789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.+++.... ..+++.++.+++.++++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 122 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 122 IMEYLPYGSLRDYLQKHK-------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp EECCCTTCBHHHHHHHST-------TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred EEECCCCCCHHHHHHhcc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 999999999999997642 3489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCC
Q 035786 666 LHAQGD 671 (693)
Q Consensus 666 a~~~~~ 671 (693)
++....
T Consensus 192 ~~~~~~ 197 (326)
T 2w1i_A 192 TKVLPQ 197 (326)
T ss_dssp CEECCS
T ss_pred hhhccc
Confidence 998743
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.2e-25 Score=232.78 Aligned_cols=165 Identities=20% Similarity=0.319 Sum_probs=128.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCc----EEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGT----TVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~----~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
++|...+.||+|+||.||+|+.. +++ .||+|.+.... ...++|.+|++++.+++|||||+++++|.. ...+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~ 92 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQ 92 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES--SSEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec--CCce
Confidence 45777889999999999999963 454 36788775432 236789999999999999999999999975 3588
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+|+||+++|+|.+++.... ..+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 93 ~v~~~~~~g~L~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG 162 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFG 162 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTT
T ss_pred EEEEecCCCcHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCc
Confidence 9999999999999997643 3489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCc-ceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
+++....... .......+|+.|+|
T Consensus 163 ~a~~~~~~~~~~~~~~~~~t~~y~a 187 (327)
T 3lzb_A 163 LAKLLGAEEKEYHAEGGKVPIKWMA 187 (327)
T ss_dssp C----------------CCCGGGSC
T ss_pred ceeEccCccccccccCCCccccccC
Confidence 9998733222 11222344555554
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=7.3e-25 Score=235.16 Aligned_cols=164 Identities=19% Similarity=0.308 Sum_probs=137.7
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCC----CeeE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHE----TEKL 584 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~~ 584 (693)
.+|...+.||+|+||.||+|.. .+++.||||++...... .+.+.+|++++.+++|||||++++++.... ...+
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 4577889999999999999986 46889999999753322 467999999999999999999999986432 3579
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+|+||++ |+|.+++.. ..+++.++..|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 107 iv~e~~~-~~L~~~l~~---------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 173 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKT---------QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFG 173 (364)
T ss_dssp EEEECCS-EEHHHHHHH---------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEcccC-cCHHHHHHh---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCc
Confidence 9999998 699999864 2489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCc--ceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQ--NVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~--~~~~~~~~~~~y~a 688 (693)
+++....... ...+..+||++|+|
T Consensus 174 ~a~~~~~~~~~~~~~~~~~gt~~y~a 199 (364)
T 3qyz_A 174 LARVADPDHDHTGFLTEYVATRWYRA 199 (364)
T ss_dssp TCEECCGGGCBCCTTCCCCSCGGGCC
T ss_pred ceEecCCCCCccccccccccccCCCC
Confidence 9998743322 12344678888876
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-25 Score=234.72 Aligned_cols=165 Identities=16% Similarity=0.322 Sum_probs=128.8
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
..++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++.+++|||||++++++.+ +...++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~l 110 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH-NHRLHL 110 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE-TTEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec-CCEEEE
Confidence 345688889999999999999985 47899999999654322 4568899999999999999999999876 468899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee-----CCCCceEE
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL-----DDKFEVRL 660 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl-----d~~~~~ki 660 (693)
||||++ |+|.+++.... .+++..+..|+.+++.||+|||+. +|+||||||+|||+ ++++.+||
T Consensus 111 v~e~~~-~~L~~~~~~~~--------~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl 178 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNP--------DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKI 178 (329)
T ss_dssp EEECCS-EEHHHHHHHCT--------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEE
T ss_pred EEecCC-CCHHHHHhhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEE
Confidence 999998 59999997542 489999999999999999999998 99999999999999 45566999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++........ .+..++|++|+|
T Consensus 179 ~Dfg~a~~~~~~~~~-~~~~~~t~~y~a 205 (329)
T 3gbz_A 179 GDFGLARAFGIPIRQ-FTHEIITLWYRP 205 (329)
T ss_dssp CCTTHHHHHC------------CCTTCC
T ss_pred CcCCCccccCCcccc-cCCCcCCccccC
Confidence 999999886433221 233455666654
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.2e-25 Score=225.39 Aligned_cols=163 Identities=17% Similarity=0.264 Sum_probs=132.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +|+.||||.+.... ...+.+.+|++++.+++||||+++++++.+ +...++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 89 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST-PTDFFMV 89 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-CCeEEEE
Confidence 35777889999999999999975 78999999986432 225679999999999999999999999875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~ 158 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG--------RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLS 158 (276)
T ss_dssp EECCCSCBHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGG
T ss_pred EeccCCCcHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccc
Confidence 99999999999997542 489999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... .....+++.|+|
T Consensus 159 ~~~~~~~~--~~~~~~~~~y~a 178 (276)
T 2h6d_A 159 NMMSDGEF--LRTSCGSPNYAA 178 (276)
T ss_dssp GCCCC---------------CC
T ss_pred cccCCCcc--eecccCCccccC
Confidence 88643321 222345666654
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=9.4e-25 Score=226.12 Aligned_cols=141 Identities=21% Similarity=0.315 Sum_probs=125.0
Q ss_pred CccccCCeeeEEEEEeC---CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 518 NLIKKGHSGDLFKGTLA---GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~---~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
..||+|+||.||+|+.. ++..||||.+..... ..+++.+|++++.+++||||+++++++. .+..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ--AEALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--SSSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec--CCCcEEEEEeCCC
Confidence 38999999999999863 578899999976432 2567999999999999999999999984 3568999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|+|.+++.... ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 94 ~~L~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 94 GPLHKFLVGKR-------EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EEHHHHHTTCT-------TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred CCHHHHHHhCC-------ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 99999996432 3589999999999999999999998 99999999999999999999999999999874
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.3e-25 Score=244.43 Aligned_cols=162 Identities=19% Similarity=0.310 Sum_probs=139.5
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.|...++||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++.+++|||||+++++|.+ +...++||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~ 105 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-KGYFYLVG 105 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEEE
Confidence 4777889999999999999975 78999999986532 235789999999999999999999999875 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCcc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfg 664 (693)
||+++|+|.+++... ..+++.....|+.+++.||+|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 106 e~~~~~~L~~~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 174 (484)
T 3nyv_A 106 EVYTGGELFDEIISR--------KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFG 174 (484)
T ss_dssp CCCCSCBHHHHHHTC--------SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTT
T ss_pred ecCCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeee
Confidence 999999999999753 3489999999999999999999998 99999999999999 467899999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... ....+||++|+|
T Consensus 175 ~a~~~~~~~~--~~~~~gt~~y~a 196 (484)
T 3nyv_A 175 LSTHFEASKK--MKDKIGTAYYIA 196 (484)
T ss_dssp HHHHBCCCCS--HHHHTTGGGTCC
T ss_pred eeEEcccccc--cccCCCCccccC
Confidence 9998754432 344568888876
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.9e-25 Score=232.61 Aligned_cols=164 Identities=21% Similarity=0.305 Sum_probs=131.9
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++|||||+++++|.+ +...++||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 103 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-KKRWYLVF 103 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-CCEEEEEE
Confidence 34777889999999999999975 5899999998654433 4568899999999999999999999875 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 104 e~~~~~~l~~~~~~~--------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 172 (331)
T 4aaa_A 104 EFVDHTILDDLELFP--------NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFAR 172 (331)
T ss_dssp ECCSEEHHHHHHHST--------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-
T ss_pred ecCCcchHHHHHhhc--------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCce
Confidence 999999999887542 2489999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
........ .....+|++|+|
T Consensus 173 ~~~~~~~~-~~~~~~t~~y~a 192 (331)
T 4aaa_A 173 TLAAPGEV-YDDEVATRWYRA 192 (331)
T ss_dssp ------------CCCCCTTCC
T ss_pred eecCCccc-cCCCcCCccccC
Confidence 76432221 223445666654
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-25 Score=232.51 Aligned_cols=156 Identities=21% Similarity=0.314 Sum_probs=118.5
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.++|...+.||+|+||.||+|.. .+++.||||++.... ...+++.+|++++.+++||||+++++++.. ++..++||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 92 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-KDELWLVM 92 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-SSCEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-cCCcEEEe
Confidence 45688889999999999999986 468999999986543 224678999999999999999999999876 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++.............+++..+..++.+++.||+|||.. +|+||||||+||++++++.+||+|||+++
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999999742111111224589999999999999999999998 99999999999999999999999999998
Q ss_pred ccC
Q 035786 668 AQG 670 (693)
Q Consensus 668 ~~~ 670 (693)
...
T Consensus 170 ~~~ 172 (303)
T 2vwi_A 170 FLA 172 (303)
T ss_dssp HCC
T ss_pred eec
Confidence 763
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-25 Score=233.93 Aligned_cols=156 Identities=26% Similarity=0.398 Sum_probs=130.5
Q ss_pred hCCCCccCccccCCeeeEEEEEeCC-C-----cEEEEEEeccccc--CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAG-G-----TTVVVKKVSLHSF--KKESYMMELDLFSRV-SHARLVPLLGQCLEHET 581 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~-g-----~~vavK~l~~~~~--~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~ 581 (693)
.++|...+.||+|+||.||+|+... + ..||||.+..... ..+.+.+|++++.++ +|||||+++++|.+ ++
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~ 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH-GG 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec-CC
Confidence 4567788999999999999999642 2 4799999975432 246799999999999 89999999999875 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCC------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLE------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK 655 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~ 655 (693)
..++||||+++|+|.+++....... ......+++..+..++.+++.||+|||+. +|+||||||+||+++++
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence 7899999999999999997532100 00123589999999999999999999998 99999999999999999
Q ss_pred CceEECCcccccccC
Q 035786 656 FEVRLGSLSELHAQG 670 (693)
Q Consensus 656 ~~~ki~Dfgla~~~~ 670 (693)
+.+||+|||+++...
T Consensus 201 ~~~kl~Dfg~~~~~~ 215 (333)
T 2i1m_A 201 HVAKIGDFGLARDIM 215 (333)
T ss_dssp GEEEBCCCGGGCCGG
T ss_pred CeEEECccccccccc
Confidence 999999999998763
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.3e-25 Score=244.04 Aligned_cols=163 Identities=15% Similarity=0.292 Sum_probs=137.9
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccc---ccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLH---SFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+.|...+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|++++.+++|||||++++++.+ +...++||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~ 100 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFYIVG 100 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-CCEEEEEE
Confidence 34777899999999999999974 6899999998642 2335789999999999999999999999875 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC---CCCceEECCcc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD---DKFEVRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld---~~~~~ki~Dfg 664 (693)
||+++|+|.+++.... .+++.....|+.+++.||+|||+. +|+||||||+|||++ .++.+||+|||
T Consensus 101 e~~~~~~L~~~~~~~~--------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 169 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK--------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG 169 (486)
T ss_dssp CCCCSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCS
T ss_pred EcCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECC
Confidence 9999999999987542 489999999999999999999998 999999999999995 56689999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... ....+||++|+|
T Consensus 170 ~a~~~~~~~~--~~~~~gt~~y~a 191 (486)
T 3mwu_A 170 LSTCFQQNTK--MKDRIGTAYYIA 191 (486)
T ss_dssp CTTTBCCC------CCTTGGGGCC
T ss_pred cCeECCCCCc--cCCCcCCCCCCC
Confidence 9987744332 344678888886
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=225.70 Aligned_cols=164 Identities=23% Similarity=0.289 Sum_probs=137.2
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc----------CHHHHHHHHHHHhcCC-CCCccceeEEEEc
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF----------KKESYMMELDLFSRVS-HARLVPLLGQCLE 578 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~----------~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~ 578 (693)
.++|...+.||+|+||.||+|+.. +|+.||||.+..... ..+.+.+|++++.+++ ||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 346778899999999999999974 689999999965421 1356889999999996 9999999998875
Q ss_pred CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 579 HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 579 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
+...++||||+++|+|.+++... ..+++..+..++.+++.||+|||.. +|+||||||+||++++++.+
T Consensus 96 -~~~~~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 163 (298)
T 1phk_A 96 -NTFFFLVFDLMKKGELFDYLTEK--------VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNI 163 (298)
T ss_dssp -SSEEEEEEECCTTCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred -CCeEEEEEeccCCCcHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcE
Confidence 46889999999999999999753 2489999999999999999999998 99999999999999999999
Q ss_pred EECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|||+++....... .....+++.|+|
T Consensus 164 kl~dfg~~~~~~~~~~--~~~~~~~~~y~a 191 (298)
T 1phk_A 164 KLTDFGFSCQLDPGEK--LREVCGTPSYLA 191 (298)
T ss_dssp EECCCTTCEECCTTCC--BCCCCSCGGGCC
T ss_pred EEecccchhhcCCCcc--cccccCCccccC
Confidence 9999999988643222 223445555554
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-25 Score=229.09 Aligned_cols=156 Identities=24% Similarity=0.340 Sum_probs=129.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEc-CCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLE-HETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.|.+|++++.+++||||+++++++.+ .+...++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 45777889999999999999974 6899999999754332 4679999999999999999999998864 24578999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC--CCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC--NPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~--~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
|||+++|+|.+++..... ....+++..+.+++.+++.||+|||... ..+|+||||||+||++++++.+||+|||
T Consensus 86 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTK----ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EECCTTEEHHHHHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EeCCCCCCHHHHHHhhcc----cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999975321 1235899999999999999999999872 1129999999999999999999999999
Q ss_pred cccccCC
Q 035786 665 ELHAQGD 671 (693)
Q Consensus 665 la~~~~~ 671 (693)
+++....
T Consensus 162 ~~~~~~~ 168 (279)
T 2w5a_A 162 LARILNH 168 (279)
T ss_dssp HHHHC--
T ss_pred hheeecc
Confidence 9988643
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-25 Score=236.76 Aligned_cols=162 Identities=23% Similarity=0.345 Sum_probs=134.6
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++|||||++++++.+ ++..++||||
T Consensus 34 ~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 112 (360)
T 3eqc_A 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEH 112 (360)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-TTEEEEEECC
T ss_pred cceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-CCEEEEEEEC
Confidence 4677789999999999999975 6899999998754322 4679999999999999999999999876 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.++++... .+++..+..++.+++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~~~~~L~~~l~~~~--------~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG--------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182 (360)
T ss_dssp CTTCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred CCCCCHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence 99999999997642 4899999999999999999999731 6999999999999999999999999999865
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
.... .....||+.|+|
T Consensus 183 ~~~~---~~~~~gt~~y~a 198 (360)
T 3eqc_A 183 IDSM---ANSFVGTRSYMS 198 (360)
T ss_dssp HHHC-------CCCCTTCC
T ss_pred cccc---ccCCCCCCCeEC
Confidence 2211 122455666654
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.1e-25 Score=253.10 Aligned_cols=165 Identities=22% Similarity=0.299 Sum_probs=133.3
Q ss_pred CCCCccCccccCCeeeEEEEEeCC----CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...+.||+|+||.||+|.... +..||||++...... .+.|.+|++++++++|||||+++|+|. ++..++
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~--~~~~~l 467 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWI 467 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSCEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--cCceEE
Confidence 456677889999999999998742 567999998653322 467999999999999999999999884 356899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||||+++|+|.++++... ..++|..+..++.++++||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 468 v~E~~~~g~L~~~l~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRK-------FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp EEECCTTCBHHHHHHHTT-------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred EEEcCCCCcHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCC
Confidence 999999999999997532 3589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++...+......+...+++.|+|
T Consensus 538 a~~~~~~~~~~~~~~~~t~~y~a 560 (656)
T 2j0j_A 538 SRYMEDSTYYKASKGKLPIKWMA 560 (656)
T ss_dssp CCSCCC----------CCGGGCC
T ss_pred CeecCCCcceeccCCCCCcceeC
Confidence 99875443333333445556654
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-24 Score=224.51 Aligned_cols=164 Identities=16% Similarity=0.140 Sum_probs=137.1
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|++++.++ +|+|++++++++.+ +...++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-GLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-TTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCC-CceeEEEEEe
Confidence 3577788999999999999995 579999999986433 335688999999999 89999999998865 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc-----eEECCcc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE-----VRLGSLS 664 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~-----~ki~Dfg 664 (693)
+ +|+|.++++... ..+++.++..|+.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 88 ~-~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 88 L-GPSLEDLLDLCG-------RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp C-CCBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred c-CCCHHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 9 999999997542 3589999999999999999999988 9999999999999988776 9999999
Q ss_pred cccccCCCCc------ceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQ------NVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~------~~~~~~~~~~~y~a 688 (693)
+++....... .......||+.|+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 186 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMS 186 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCC
T ss_pred cccccccccccccccccCccCCCCCcccCC
Confidence 9998743322 11334567777765
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=217.90 Aligned_cols=207 Identities=26% Similarity=0.232 Sum_probs=178.1
Q ss_pred ccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCC
Q 035786 137 SFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSI 216 (693)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 216 (693)
.++++++|+++++++|.++ .+|..+. ++|++|+|++|.+++..|..+..+++|++|+|++|.+++. |.. ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcC
Confidence 4678899999999999998 5666554 6899999999999988889999999999999999999864 333 789999
Q ss_pred CEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccC
Q 035786 217 QFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSG 296 (693)
Q Consensus 217 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~ 296 (693)
+.|++++|+++ .+|..+..+++|++|++++|++++..|..|.++++|++|+|++|+++ .+|...|..+++|+.|+|++
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC-ccChhhcccccCCCEEECCC
Confidence 99999999998 67888999999999999999999888888999999999999999998 46667778899999999999
Q ss_pred CcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceec
Q 035786 297 NKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDL 352 (693)
Q Consensus 297 N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~ 352 (693)
|++++..+..+..+++|+.|+|++|+|+ .+|.. ......|+.++|++|.+.+++
T Consensus 158 N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~-~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKG-FFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTT-TTTTCCCSEEECCSCCBCCSG
T ss_pred CcCCccCHHHhcCcCCCCEEECCCCcCC-ccChh-hcccccCCeEEeCCCCccCcC
Confidence 9999777777788999999999999998 67743 344557777777777776654
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=5.2e-25 Score=236.51 Aligned_cols=160 Identities=21% Similarity=0.301 Sum_probs=118.3
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC-----CCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH-----ETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~ 582 (693)
++|...+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++|||||++++++... ...
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 5677889999999999999985 56899999999653322 46788999999999999999999988642 145
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++|+||+ +|+|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|
T Consensus 109 ~~lv~e~~-~~~L~~~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~D 175 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC---------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILD 175 (367)
T ss_dssp CEEEEECC-CEECC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred EEEEeccc-CCCHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEee
Confidence 79999999 6899988864 2489999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++..... .+..++|++|+|
T Consensus 176 FG~a~~~~~~----~~~~~~t~~y~a 197 (367)
T 2fst_X 176 FGLARHTADE----MTGYVATRWYRA 197 (367)
T ss_dssp -------------------CCCTTCC
T ss_pred cccccccccc----CCCcCcCcCccC
Confidence 9999886432 233567777765
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-24 Score=224.47 Aligned_cols=162 Identities=15% Similarity=0.227 Sum_probs=137.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+.. +++.||||.+.... ...+.+.+|++++.+++||||+++++++.+ ++..++|
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 92 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-RKRIYLM 92 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-CCEEEEE
Confidence 34777889999999999999975 58899999986432 224679999999999999999999999875 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 93 ~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~ 161 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG--------RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS 161 (284)
T ss_dssp ECCCTTEEHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEeCCCCcHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEeccccc
Confidence 99999999999997542 489999999999999999999998 9999999999999999999999999998
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... ....|++.|+|
T Consensus 162 ~~~~~~~~---~~~~~~~~y~a 180 (284)
T 2vgo_A 162 VHAPSLRR---RTMCGTLDYLP 180 (284)
T ss_dssp EECSSSCB---CCCCSCGGGCC
T ss_pred ccCccccc---ccccCCCCcCC
Confidence 77643221 23456666654
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=228.43 Aligned_cols=159 Identities=15% Similarity=0.239 Sum_probs=133.6
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCCccceeEEEEcC-CCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HARLVPLLGQCLEH-ETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~-~~~~~lv~e 588 (693)
++|...+.||+|+||.||+|+. .+++.||||++.. ...+.+.+|++++.+++ ||||+++++++.+. ....++|||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP--VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS--CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc--cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 4577788999999999999985 5789999999864 33577999999999997 99999999998753 346789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC-ceEECCccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF-EVRLGSLSELH 667 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~-~~ki~Dfgla~ 667 (693)
|+++|+|.++++. +++.++..++.+++.||+|||.. +|+||||||+|||++.++ .+||+|||+++
T Consensus 114 ~~~~~~l~~~~~~-----------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 114 HVNNTDFKQLYQT-----------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp CCCCCCHHHHGGG-----------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred ccCchhHHHHHHh-----------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 9999999998852 88999999999999999999998 999999999999999776 89999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... .....++++|+|
T Consensus 180 ~~~~~~~--~~~~~~~~~y~a 198 (330)
T 3nsz_A 180 FYHPGQE--YNVRVASRYFKG 198 (330)
T ss_dssp ECCTTCC--CCSCCSCGGGCC
T ss_pred EcCCCCc--cccccccccccC
Confidence 7643322 223456666654
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.1e-25 Score=231.12 Aligned_cols=153 Identities=23% Similarity=0.358 Sum_probs=126.7
Q ss_pred CCCCccCccccCCeeeEEEEEe------CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
++|...+.||+|+||.||+|+. .+++.||||++..... ..++|.+|++++.+++||||+++++++.+ +...
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~ 108 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-SLPR 108 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSC
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC-CCCc
Confidence 4577888999999999999984 2467899999964322 24579999999999999999999999875 4578
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEE
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRL 660 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki 660 (693)
++||||+++|+|.++++..... ......+++.++..++.+++.||+|||.. +|+||||||+||+++. +..+||
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPR-PSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCC-SSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred EEEEecCCCCcHHHHHHhhccc-ccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999864321 11224589999999999999999999998 9999999999999994 456999
Q ss_pred CCccccccc
Q 035786 661 GSLSELHAQ 669 (693)
Q Consensus 661 ~Dfgla~~~ 669 (693)
+|||+++..
T Consensus 185 ~Dfg~~~~~ 193 (327)
T 2yfx_A 185 GDFGMARDI 193 (327)
T ss_dssp CCCHHHHHH
T ss_pred Ccccccccc
Confidence 999999865
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.91 E-value=8.8e-25 Score=232.38 Aligned_cols=161 Identities=16% Similarity=0.185 Sum_probs=132.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
++|...+.||+|+||.||+|+.. +|+.||||.+..... .+.+|++++.++ +|||||++++++.+ +...++||||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDD-GKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEc-CCEEEEEEeC
Confidence 35777889999999999999974 689999999975432 345688999888 79999999998875 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC----CceEECCccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK----FEVRLGSLSE 665 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~----~~~ki~Dfgl 665 (693)
+++|+|.+++... ..+++.....++.+|+.||+|||+. +|+||||||+|||+.++ ..+||+|||+
T Consensus 98 ~~gg~L~~~i~~~--------~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 98 MKGGELLDKILRQ--------KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp CCSCBHHHHHHTC--------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred CCCCcHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 9999999999753 2489999999999999999999998 99999999999998543 3599999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++........ ....+||+.|+|
T Consensus 167 a~~~~~~~~~-~~~~~gt~~y~a 188 (342)
T 2qr7_A 167 AKQLRAENGL-LMTPCYTANFVA 188 (342)
T ss_dssp CEECBCTTCC-BCCSSCCSSCCC
T ss_pred cccCcCCCCc-eeccCCCccccC
Confidence 9987433222 223456666665
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=234.01 Aligned_cols=161 Identities=19% Similarity=0.279 Sum_probs=126.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-----Ce
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE-----TE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~ 582 (693)
++|...+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++|||||++++++...+ ..
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 4577889999999999999986 46899999999753322 457889999999999999999999986532 25
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||++ |+|.+++.. .+++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 105 ~~lv~e~~~-~~l~~~~~~----------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 170 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQM----------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 170 (371)
T ss_dssp EEEEEECCS-EEHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred eEEEEEcCC-CCHHHHHhh----------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEE
Confidence 799999998 578888752 388999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++....... .+..+||+.|+|
T Consensus 171 fg~a~~~~~~~~--~~~~~gt~~y~a 194 (371)
T 2xrw_A 171 FGLARTAGTSFM--MTPYVVTRYYRA 194 (371)
T ss_dssp CCC------------------CTTCC
T ss_pred eecccccccccc--cCCceecCCccC
Confidence 999988744322 334567777765
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=227.53 Aligned_cols=163 Identities=16% Similarity=0.229 Sum_probs=132.5
Q ss_pred CCcc-CccccCCeeeEEEEEeC-CCcEEEEEEeccccc---CHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEE
Q 035786 514 FSET-NLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---KKESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 514 ~~~~-~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ 587 (693)
|... +.||+|+||.||+|... +|+.||||++..... ..+++.+|++++.+++ ||||+++++++.+ +...++||
T Consensus 30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~-~~~~~lv~ 108 (327)
T 3lm5_A 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN-TSEIILIL 108 (327)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEE
T ss_pred EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe-CCeEEEEE
Confidence 4443 78999999999999975 689999999875332 2568999999999994 6999999999875 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECCcc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~Dfg 664 (693)
||+++|+|.+++..... ..+++.++..++.+++.||+|||.. +|+||||||+||+++. ++.+||+|||
T Consensus 109 e~~~~~~L~~~~~~~~~------~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg 179 (327)
T 3lm5_A 109 EYAAGGEIFSLCLPELA------EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFG 179 (327)
T ss_dssp ECCTTEEGGGGGSSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGG
T ss_pred EecCCCcHHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCc
Confidence 99999999999864321 4589999999999999999999998 9999999999999998 7899999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... ....+||+.|+|
T Consensus 180 ~a~~~~~~~~--~~~~~gt~~y~a 201 (327)
T 3lm5_A 180 MSRKIGHACE--LREIMGTPEYLA 201 (327)
T ss_dssp GCEEC-----------CCCGGGCC
T ss_pred cccccCCccc--cccccCCcCccC
Confidence 9998744332 233567777765
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=225.15 Aligned_cols=167 Identities=17% Similarity=0.254 Sum_probs=136.5
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
..++|...+.||+|+||.||+|+. .+++.||||.+..... .+++.+|++++.+++|++++..+++|...+...++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 346688899999999999999996 5789999998754332 34588999999999999999888888766677899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLSE 665 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfgl 665 (693)
|+ +|+|.+++.... ..+++.++..++.+++.||+|||+. +|+||||||+|||+ ++++.+||+|||+
T Consensus 86 ~~-~~~L~~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~ 154 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCS-------RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp CC-CCBHHHHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred cc-CCCHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence 99 999999997432 3599999999999999999999998 99999999999999 7889999999999
Q ss_pred ccccCCCCc------ceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQ------NVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~------~~~~~~~~~~~y~a 688 (693)
++....... .......||+.|+|
T Consensus 155 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a 183 (296)
T 4hgt_A 155 AKKYRDARTHQHIPYRENKNLTGTARYAS 183 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCGGGCC
T ss_pred ceeccCcccCccCCCCcccccCCCccccc
Confidence 998743322 11234567888876
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-24 Score=224.03 Aligned_cols=168 Identities=18% Similarity=0.292 Sum_probs=136.7
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc-----cCHHHHHHHHHHHhcCCCCCccceeEEEEcC-CCee
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS-----FKKESYMMELDLFSRVSHARLVPLLGQCLEH-ETEK 583 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~-----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~ 583 (693)
.++|...+.||+|+||.||+|.. .+++.||||.+.... ...+.|.+|++++.+++||||+++++++... ....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 35688899999999999999997 468899999986532 2246799999999999999999999998642 3467
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++||||+++| |.+++..... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~------~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~df 153 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPE------KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISAL 153 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTT------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEehhccCC-HHHHHHhCcc------cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecc
Confidence 9999999987 7777765322 3589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCC-Ccceeeeeehhhhhhh
Q 035786 664 SELHAQGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~-~~~~~~~~~~~~~y~a 688 (693)
|+++..... .........||+.|+|
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~y~a 179 (305)
T 2wtk_C 154 GVAEALHPFAADDTCRTSQGSPAFQP 179 (305)
T ss_dssp TTCEECCTTCSSCEECCCCSCGGGCC
T ss_pred ccccccCccccccccccCCCCCCCcC
Confidence 999886432 2222334556777765
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-24 Score=232.16 Aligned_cols=174 Identities=15% Similarity=0.197 Sum_probs=128.4
Q ss_pred HHHHHHhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCC--
Q 035786 505 EQLLRATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET-- 581 (693)
Q Consensus 505 ~~l~~at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-- 581 (693)
++.....++|...+.||+|+||.||+|+. .+|+.||||++.......+.+.+|++.+..++|||||+++++|...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 45566778899999999999999999997 468999999987655555667889999999999999999999865321
Q ss_pred ----eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhc--cCCCCCeEecCCCCCCeeeCC-
Q 035786 582 ----EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLH--HECNPPLVHRDVQASSILLDD- 654 (693)
Q Consensus 582 ----~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH--~~~~p~iiHrDlk~~NILld~- 654 (693)
..++||||+++ +|.+.+..... ....+++.....++.+++.||+||| .. +|+||||||+|||++.
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYR----RQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHT----TTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETT
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhh----cccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCC
Confidence 26899999986 55544432110 1145899999999999999999999 65 9999999999999997
Q ss_pred CCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 655 KFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 655 ~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++.+||+|||+++....... .....||++|+|
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~a 199 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSEP--NVAYICSRYYRA 199 (360)
T ss_dssp TTEEEECCCTTCBCCCTTSC--CCSTTSCGGGCC
T ss_pred CCcEEEeeCCCceecCCCCC--cccccCCcceeC
Confidence 89999999999998754332 223456666765
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=226.59 Aligned_cols=148 Identities=22% Similarity=0.379 Sum_probs=127.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++.+++||||+++++++.+ ++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-ENKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-CCceEEEE
Confidence 35777889999999999999975 6899999998654322 4678999999999999999999999876 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||++ |+|.+++..... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 82 e~~~-~~L~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 151 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASAL------TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151 (299)
T ss_dssp ECCS-EEHHHHHHHTTT------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHH
T ss_pred Eccc-CCHHHHHHhhhc------cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhh
Confidence 9998 699999975432 3489999999999999999999998 99999999999999999999999999998
Q ss_pred ccC
Q 035786 668 AQG 670 (693)
Q Consensus 668 ~~~ 670 (693)
..+
T Consensus 152 ~~~ 154 (299)
T 2r3i_A 152 AFG 154 (299)
T ss_dssp HHC
T ss_pred hcc
Confidence 764
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-25 Score=240.86 Aligned_cols=155 Identities=17% Similarity=0.213 Sum_probs=124.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHH---HHHhcCCCCCcccee-------EEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMEL---DLFSRVSHARLVPLL-------GQC 576 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei---~~l~~l~H~niv~l~-------g~~ 576 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.... ...+.|.+|+ +++++++|||||+++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 4566778999999999999996 569999999996432 1246799999 566677899999998 554
Q ss_pred EcCCC----------------eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCe
Q 035786 577 LEHET----------------EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPL 640 (693)
Q Consensus 577 ~~~~~----------------~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~i 640 (693)
.+.+. ..++||||+ +|+|.++++...... .....++|..+.+|+.||+.||+|||+. +|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHS-STHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTT-TTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccc-cccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 43211 278999999 689999998542211 1113466899999999999999999998 99
Q ss_pred EecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 641 VHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 641 iHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+||||||+|||+++++.+||+|||+++..+.
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~ 258 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA 258 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC
Confidence 9999999999999999999999999997543
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=231.25 Aligned_cols=164 Identities=16% Similarity=0.280 Sum_probs=134.9
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcC----CCeeE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEH----ETEKL 584 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~----~~~~~ 584 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+++.+|++++.+++||||+++++++... ....+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 46778889999999999999974 6899999999643322 45788999999999999999999987642 24679
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 91 lv~e~~~-~~L~~~~~~---------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST---------QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFG 157 (353)
T ss_dssp EEECCCS-EEHHHHHHH---------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred EEEeccC-ccHHHHHhh---------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecc
Confidence 9999998 699999875 2489999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCcc---------eeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQN---------VLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~---------~~~~~~~~~~y~a 688 (693)
+++........ .....+||++|+|
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 190 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRA 190 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCC
T ss_pred cccccccccccccCccccccchhhccccccccC
Confidence 99987432111 1223467777766
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.1e-25 Score=229.03 Aligned_cols=147 Identities=18% Similarity=0.347 Sum_probs=128.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.|...+.||+|+||.||+|+.. +|+.||+|.+..... ..+.|.+|++++.+++||||+++++++.. ++..++||||
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 97 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-DGKLWIMIEF 97 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-C-CEEEEEEC
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-CCeEEEEEEe
Confidence 45777889999999999999975 589999999865433 36789999999999999999999999876 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.+++.... ..+++.++..++.+++.||+|||.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 98 ~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 98 CPGGAVDAIMLELD-------RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp CTTEEHHHHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred CCCCcHHHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 99999999987532 3489999999999999999999998 9999999999999999999999999997653
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=225.53 Aligned_cols=165 Identities=19% Similarity=0.340 Sum_probs=135.0
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.+.|...+.||+|+||.||+|... +|+.||||.+.... ..+++.+|++++.+++||||+++++++.+ ++..++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFK-NTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEeec
Confidence 346778889999999999999975 58999999997543 34679999999999999999999999876 4688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.+++.... ..+++..+..++.+++.||.|||.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 106 ~~~~~L~~~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 106 CGAGSVSDIIRLRN-------KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp CTTEEHHHHHHHHT-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred CCCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 99999999997432 3589999999999999999999998 9999999999999999999999999999887
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
...... .....|++.|+|
T Consensus 176 ~~~~~~-~~~~~~~~~y~a 193 (314)
T 3com_A 176 TDTMAK-RNTVIGTPFWMA 193 (314)
T ss_dssp BTTBSC-BCCCCSCGGGCC
T ss_pred hhhccc-cCccCCCCCccC
Confidence 443221 233456666655
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.2e-25 Score=230.70 Aligned_cols=151 Identities=21% Similarity=0.292 Sum_probs=128.9
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEc---CCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLE---HETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~---~~~~~~lv 586 (693)
++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++.+++|||||+++++|.. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 4577888999999999999996 5789999999865332 25679999999999999999999999863 22367899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++..... ....+++.++..++.++++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 109 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKD----KGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EECCTTCBHHHHHHHHHT----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEeCCCCcHHHHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 999999999999975321 124599999999999999999999998 9999999999999999999999999998
Q ss_pred ccc
Q 035786 667 HAQ 669 (693)
Q Consensus 667 ~~~ 669 (693)
+..
T Consensus 182 ~~~ 184 (317)
T 2buj_A 182 NQA 184 (317)
T ss_dssp EES
T ss_pred hhc
Confidence 775
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.5e-25 Score=247.90 Aligned_cols=153 Identities=15% Similarity=0.080 Sum_probs=117.9
Q ss_pred cccCCeeeEEEEE-eCCCcEEEEEEeccccc-----------CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEE
Q 035786 520 IKKGHSGDLFKGT-LAGGTTVVVKKVSLHSF-----------KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 520 ig~G~~G~Vy~~~-~~~g~~vavK~l~~~~~-----------~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv 586 (693)
.+.|+.|.++++. +--|+.||||.+..... ..++|.+|+++|+++ .|+||+++++|+-+ +...|||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed-~~~~yLV 320 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN-AQSGWLV 320 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC-SSEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE-CCEEEEE
Confidence 4556666665544 23488999999865321 135799999999999 79999999998864 5789999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||++||+|.++|.+.. .++.. +|+.||+.||+|+|++ +||||||||+||||++++.+||+|||+|
T Consensus 321 MEyv~G~~L~d~i~~~~--------~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlA 386 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE--------EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSI 386 (569)
T ss_dssp EECCCSEEHHHHHHTTC--------CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTE
T ss_pred EecCCCCcHHHHHHhCC--------CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccC
Confidence 99999999999997543 35543 5899999999999999 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ .+..+||+.|||
T Consensus 387 r~~~~~~~~-~~t~vGTp~YmA 407 (569)
T 4azs_A 387 VTTPQDCSW-PTNLVQSFFVFV 407 (569)
T ss_dssp ESCC---CC-SHHHHHHHHHHH
T ss_pred eeCCCCCcc-ccCceechhhcc
Confidence 987543332 445789999997
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-25 Score=237.50 Aligned_cols=163 Identities=18% Similarity=0.213 Sum_probs=133.8
Q ss_pred CCCCccCccccCCeeeEEEEEeC---------CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccc-----------
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA---------GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVP----------- 571 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~---------~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~----------- 571 (693)
++|...+.||+|+||.||+|+.. +++.||||.+... +.+.+|++++.+++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 45777889999999999999975 3789999998643 46889999999999999988
Q ss_pred ----eeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCC
Q 035786 572 ----LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQA 647 (693)
Q Consensus 572 ----l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~ 647 (693)
+++++...+...++||||+ +|+|.+++.... ...+++.++..|+.|++.||+|||+. +|+||||||
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~------~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP------KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG------GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC------cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 6778776557889999999 999999998542 13599999999999999999999998 999999999
Q ss_pred CCeeeCCCC--ceEECCcccccccCCCCcc------eeeeeehhhhhhh
Q 035786 648 SSILLDDKF--EVRLGSLSELHAQGDSHQN------VLTRFLWRQLYQS 688 (693)
Q Consensus 648 ~NILld~~~--~~ki~Dfgla~~~~~~~~~------~~~~~~~~~~y~a 688 (693)
+|||+++++ .+||+|||+++........ ..+...||+.|+|
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~a 236 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFIS 236 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCC
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccC
Confidence 999999998 9999999999886432111 1233467777765
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=227.00 Aligned_cols=168 Identities=19% Similarity=0.343 Sum_probs=126.9
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||.||+|.. .+|+.||||++..... ..++|.+|++++.+++||||++++++|.+ ++..++|
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 110 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIV 110 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCcEEEE
Confidence 3577888999999999999996 5789999999975322 24678999999999999999999999986 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++..... ....+++..+..++.+++.||+|||.. +|+||||||+||+++.++.+||+|||++
T Consensus 111 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~ 183 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKK----QKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLG 183 (310)
T ss_dssp EECCCSCBHHHHHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC---
T ss_pred EecCCCCCHHHHHHHhcc----cccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccce
Confidence 999999999999974211 114589999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ .....+++.|+|
T Consensus 184 ~~~~~~~~~-~~~~~~~~~y~a 204 (310)
T 2wqm_A 184 RFFSSKTTA-AHSLVGTPYYMS 204 (310)
T ss_dssp ----------------CCSSCC
T ss_pred eeecCCCcc-ccccCCCeeEeC
Confidence 876432211 122345555543
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=224.28 Aligned_cols=145 Identities=20% Similarity=0.315 Sum_probs=124.9
Q ss_pred CCccC-ccccCCeeeEEEEEe---CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 514 FSETN-LIKKGHSGDLFKGTL---AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 514 ~~~~~-~ig~G~~G~Vy~~~~---~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
|...+ .||+|+||.||+|.+ .+++.||||++...... .++|.+|++++.+++||||++++++|. .+..++|
T Consensus 18 y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~lv 95 (291)
T 1xbb_A 18 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE--AESWMLV 95 (291)
T ss_dssp EEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--SSSEEEE
T ss_pred hhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC--CCCcEEE
Confidence 44555 899999999999965 34689999999754322 467999999999999999999999984 3568999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++.. ..+++.++..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 96 ~e~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 164 (291)
T 1xbb_A 96 MEMAELGPLNKYLQQN--------RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS 164 (291)
T ss_dssp EECCTTEEHHHHHHHC--------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEeCCCCCHHHHHHhC--------cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcc
Confidence 9999999999999753 2489999999999999999999998 9999999999999999999999999999
Q ss_pred cccCC
Q 035786 667 HAQGD 671 (693)
Q Consensus 667 ~~~~~ 671 (693)
+....
T Consensus 165 ~~~~~ 169 (291)
T 1xbb_A 165 KALRA 169 (291)
T ss_dssp EECCT
T ss_pred eeecc
Confidence 88743
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.9e-25 Score=229.92 Aligned_cols=147 Identities=16% Similarity=0.280 Sum_probs=125.2
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc---------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF---------KKESYMMELDLFSRVSHARLVPLLGQCLEHET 581 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~---------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~ 581 (693)
++|...+.||+|+||.||+|+.. +++.||||.+..... ..+.|.+|++++.+++||||+++++++.. +
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~ 87 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA--E 87 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES--S
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC--C
Confidence 35778899999999999999964 589999999864321 13468899999999999999999998864 3
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc---e
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE---V 658 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~---~ 658 (693)
..++||||+++|+|.+++... ..+++.....++.+++.||+|||.. +|+||||||+||+++.+.. +
T Consensus 88 ~~~lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~ 156 (322)
T 2ycf_A 88 DYYIVLELMEGGELFDKVVGN--------KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLI 156 (322)
T ss_dssp SEEEEEECCTTEETHHHHSTT--------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCE
T ss_pred ceEEEEecCCCCcHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeE
Confidence 489999999999999998643 3489999999999999999999998 9999999999999987654 9
Q ss_pred EECCcccccccCC
Q 035786 659 RLGSLSELHAQGD 671 (693)
Q Consensus 659 ki~Dfgla~~~~~ 671 (693)
||+|||+++....
T Consensus 157 kl~Dfg~~~~~~~ 169 (322)
T 2ycf_A 157 KITDFGHSKILGE 169 (322)
T ss_dssp EECCCTTCEECCC
T ss_pred EEccCccceeccc
Confidence 9999999998744
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-24 Score=238.61 Aligned_cols=163 Identities=20% Similarity=0.291 Sum_probs=128.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCC---C--eeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHE---T--EKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~---~--~~~lv 586 (693)
.|...++||+|+||.||+|+.. +|+.||||++.... +.+.+|++++++++|||||+++++|+... + ..++|
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 3667789999999999999975 58999999986432 22447999999999999999999886421 1 25689
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEECCccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLGSLSE 665 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~Dfgl 665 (693)
|||+++ +|.+.+..... ....+++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 132 ~e~~~~-~l~~~~~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSR----AKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EECCCE-EHHHHHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred hhcccc-cHHHHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 999985 66666643111 114599999999999999999999998 99999999999999965 6789999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... ....++|++|+|
T Consensus 204 a~~~~~~~~--~~~~~~t~~y~a 224 (420)
T 1j1b_A 204 AKQLVRGEP--NVSYICSRYYRA 224 (420)
T ss_dssp CEECCTTCC--CCSCCSCTTSCC
T ss_pred hhhcccCCC--ceeeeeCCCcCC
Confidence 998643322 233567777765
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-26 Score=254.83 Aligned_cols=302 Identities=22% Similarity=0.200 Sum_probs=176.2
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCC----CccEEEecCCCCCc----CCCcccCCCccCCEEecccCcCCccCc
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLP----ALQVLDLRSCSLSG----SIPGSFGNLSRLNVLYLSGNSLAGNVP 159 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~----~L~~L~Ls~n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~~~~p 159 (693)
.+..+++|++|++++|.+....+..+...++ +|++|+|++|.++. .+|..+.++++|++|+|++|.+++..+
T Consensus 51 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 130 (461)
T 1z7x_W 51 ALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGL 130 (461)
T ss_dssp HHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHH
T ss_pred HHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHH
Confidence 3455677777777777766544444444455 57777777777763 456667777777777777777654433
Q ss_pred ccc-----CCCCCCCEEEccCCCCCCc----CchhhhcCcCCCeeecccccCCCcCccccc-----CCCCCCEEEccCCc
Q 035786 160 ATL-----GELKKLSNLDLSRNLLTGE----IPNAISLLGNLTRLNLASNFFTGQIPSGLY-----SLSSIQFLNLSDNA 225 (693)
Q Consensus 160 ~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-----~l~~L~~L~Ls~N~ 225 (693)
..+ ...++|++|+|++|.+++. ++..+..+++|++|++++|.+++..+..+. ..++|+.|++++|.
T Consensus 131 ~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 210 (461)
T 1z7x_W 131 QLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCG 210 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSC
T ss_pred HHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCC
Confidence 322 2245677777777777653 345556667777777777776543333332 24567777777777
Q ss_pred cccc----CCccccCCCCCCEEEccCCcCcccC-----chhhhcCcccccccccccccccc----CCCcccCCCCCCCEE
Q 035786 226 LTGF----IPSEVGNLDKLIELDLSKNSISGSL-----PLELRGLRNLAKLVISENGLEGQ----LSEGLFPTLDQLQVV 292 (693)
Q Consensus 226 l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~-----p~~~~~l~~L~~L~Ls~N~l~g~----i~~~~~~~l~~L~~L 292 (693)
+++. ++..+..+++|++|++++|.+++.. +..+..+++|++|++++|.+++. ++.. +..+++|+.|
T Consensus 211 l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~-l~~~~~L~~L 289 (461)
T 1z7x_W 211 VTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRV-LRAKESLKEL 289 (461)
T ss_dssp CBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH-HHHCTTCCEE
T ss_pred CcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHH-HhhCCCcceE
Confidence 6653 4555666677777777777665432 22223466777777777766542 3322 2445667777
Q ss_pred EccCCcCCCcCccccc-----CCCCCCEEEccCCcCccc----CCccCcCCCCCCcEEEccCCccceecCC-------CC
Q 035786 293 DLSGNKLDGALPATLF-----LRPNLRFLDLSRNNITGS----WPILSTNGNASGAVFNISNNMLYGDLNS-------SS 356 (693)
Q Consensus 293 ~Ls~N~l~g~~p~~l~-----~~~~L~~L~Ls~N~l~g~----~p~~~~~~~~~l~~l~ls~N~l~g~~~~-------~~ 356 (693)
++++|.+++..+..+. ..++|+.|++++|++++. +|. .+..++.|+.|++++|.+.+..+. ..
T Consensus 290 ~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~ 368 (461)
T 1z7x_W 290 SLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS-VLAQNRFLLELQISNNRLEDAGVRELCQGLGQP 368 (461)
T ss_dssp ECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH-HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTST
T ss_pred ECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH-HHhhCCCccEEEccCCccccccHHHHHHHHcCC
Confidence 7777766544332222 124677777777776643 221 223345667777777766543221 11
Q ss_pred CCCCCEEEccCCccee----ecCCCcC-----cccccCCCcCCC
Q 035786 357 FRKFSLIDLSSNYFQG----TVADDRG-----RNVSLGRNCLQS 391 (693)
Q Consensus 357 ~~~l~~ldLs~N~l~g----~ip~~~~-----~~~~l~~n~l~g 391 (693)
.++|+.|+|++|.+++ .+|..+. +.+++++|.+++
T Consensus 369 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 369 GSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred CCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 4566777777777665 4443322 245666665543
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-24 Score=228.09 Aligned_cols=154 Identities=22% Similarity=0.444 Sum_probs=128.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcE--EEEEEeccccc--CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTT--VVVKKVSLHSF--KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~--vavK~l~~~~~--~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...+.||+|+||.||+|+.. +|.. ||||++..... ..+.|.+|++++.++ +||||+++++++.+ ++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-TTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee-CCceEE
Confidence 34777889999999999999964 5664 59999865322 246799999999999 99999999999875 468899
Q ss_pred EEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 586 VYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
||||+++|+|.++++...... ......+++.++..++.+++.||+|||.. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997542000 01124589999999999999999999998 9999999999999999999
Q ss_pred eEECCccccccc
Q 035786 658 VRLGSLSELHAQ 669 (693)
Q Consensus 658 ~ki~Dfgla~~~ 669 (693)
+||+|||+++..
T Consensus 181 ~kL~Dfg~~~~~ 192 (327)
T 1fvr_A 181 AKIADFGLSRGQ 192 (327)
T ss_dssp EEECCTTCEESS
T ss_pred EEEcccCcCccc
Confidence 999999999864
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=223.32 Aligned_cols=166 Identities=17% Similarity=0.257 Sum_probs=138.6
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.++|...+.||+|+||.||+|+. .+|+.||||++..... .+++.+|++++.+++|+++++.+++|...+...++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 35678889999999999999996 6799999999865432 346899999999999999888888886656778999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCcccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLSEL 666 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfgla 666 (693)
+ +|+|.++++... ..+++.++..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||++
T Consensus 87 ~-~~~L~~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 87 L-GPSLEDLFNFCS-------RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp C-CCBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred c-CCCHHHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 9 999999997432 3599999999999999999999998 99999999999999 58899999999999
Q ss_pred cccCCCCcc------eeeeeehhhhhhh
Q 035786 667 HAQGDSHQN------VLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~------~~~~~~~~~~y~a 688 (693)
+........ ......||+.|+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a 183 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYAS 183 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCC
T ss_pred ccccccccccccccccccccccccccCC
Confidence 987443221 1234567777765
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=252.95 Aligned_cols=158 Identities=20% Similarity=0.268 Sum_probs=131.4
Q ss_pred CCCCccCccccCCeeeEEEEEeC--CCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCe----e
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA--GGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETE----K 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~--~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~----~ 583 (693)
++|...+.||+|+||.||+|... +|+.||||++..... ..+.|.+|++++.+++|||||+++++|...+.. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 46788889999999999999974 689999999864322 245789999999999999999999998754321 6
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
|+|||||++|+|.+++.. .++|.++..|+.+|+.||+|||+. +||||||||+|||++++ .+||+||
T Consensus 160 ~lv~E~~~g~~L~~~~~~----------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DF 225 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ----------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDL 225 (681)
T ss_dssp EEEEECCCCEECC----C----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCC
T ss_pred EEEEEeCCCCcHHHHHhC----------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEec
Confidence 999999999999887642 489999999999999999999998 89999999999999986 9999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+++...... ..+||+.|+|
T Consensus 226 G~a~~~~~~~-----~~~gt~~y~a 245 (681)
T 2pzi_A 226 GAVSRINSFG-----YLYGTPGFQA 245 (681)
T ss_dssp TTCEETTCCS-----CCCCCTTTSC
T ss_pred ccchhcccCC-----ccCCCccccC
Confidence 9999875442 2456777765
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=236.10 Aligned_cols=162 Identities=14% Similarity=0.192 Sum_probs=134.9
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcC------CCCCccceeEEEEcCCCeeE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRV------SHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l------~H~niv~l~g~~~~~~~~~~ 584 (693)
..|...++||+|+||.||+|... +++.||||++.......+++.+|++++..+ +|+||+++++++.. ....+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF-RNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE-TTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc-CCeEE
Confidence 45777889999999999999864 589999999976544456788899888877 57799999999875 46889
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc--eEECC
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE--VRLGS 662 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~--~ki~D 662 (693)
+||||+. |+|.+++..... ..++|..+..|+.|++.||+|||+. +||||||||+|||++.++. +||+|
T Consensus 176 lv~e~~~-~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKF------QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTT------CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECC
T ss_pred EEEeccC-CCHHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEee
Confidence 9999996 699999976432 3489999999999999999999998 9999999999999999887 99999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++....... ..+||++|+|
T Consensus 246 FG~a~~~~~~~~----~~~gt~~y~a 267 (429)
T 3kvw_A 246 FGSSCYEHQRVY----TYIQSRFYRA 267 (429)
T ss_dssp CTTCEETTCCCC----SSCSCGGGCC
T ss_pred cccceecCCccc----ccCCCCCccC
Confidence 999987643322 2456666665
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=226.86 Aligned_cols=146 Identities=18% Similarity=0.325 Sum_probs=121.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEc-----------
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLE----------- 578 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~----------- 578 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+++.+|++++++++|||||++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 45777889999999999999975 4899999998754332 4679999999999999999999998742
Q ss_pred --CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CC
Q 035786 579 --HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DK 655 (693)
Q Consensus 579 --~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~ 655 (693)
.....++||||++ |+|.+++.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++ ++
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ---------GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTED 157 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTT
T ss_pred ccccCceeEEeeccC-CCHHHHhhc---------CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCC
Confidence 2246789999998 799999863 2488999999999999999999998 999999999999997 57
Q ss_pred CceEECCcccccccC
Q 035786 656 FEVRLGSLSELHAQG 670 (693)
Q Consensus 656 ~~~ki~Dfgla~~~~ 670 (693)
+.+||+|||+++...
T Consensus 158 ~~~kl~Dfg~~~~~~ 172 (320)
T 2i6l_A 158 LVLKIGDFGLARIMD 172 (320)
T ss_dssp TEEEECCCTTCBCC-
T ss_pred CeEEEccCccccccC
Confidence 899999999999863
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=236.33 Aligned_cols=167 Identities=16% Similarity=0.251 Sum_probs=120.7
Q ss_pred cCccccCCeeeEEEEEeC---CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEc-CCCeeEEEEccCCC
Q 035786 517 TNLIKKGHSGDLFKGTLA---GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLE-HETEKLLVYKYMVC 592 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~---~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~~lv~ey~~~ 592 (693)
.++||+|+||.||+|+.. +++.||||++..... .+.+.+|++++.+++|||||+++++|.. .+...++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~- 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-
Confidence 458999999999999965 478999999975432 4568899999999999999999999864 3457899999997
Q ss_pred CChhhhhhccCCC-CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee----CCCCceEECCccccc
Q 035786 593 GDLASSLHRVTDL-EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL----DDKFEVRLGSLSELH 667 (693)
Q Consensus 593 GsL~~~l~~~~~~-~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl----d~~~~~ki~Dfgla~ 667 (693)
|+|.+++...... .......+++..+..|+.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 180 (405)
T 3rgf_A 104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 180 (405)
T ss_dssp EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence 5888888632110 011123599999999999999999999998 89999999999999 778999999999999
Q ss_pred ccCCCCc--ceeeeeehhhhhhh
Q 035786 668 AQGDSHQ--NVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~--~~~~~~~~~~~y~a 688 (693)
....... ......+||++|+|
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~a 203 (405)
T 3rgf_A 181 LFNSPLKPLADLDPVVVTFWYRA 203 (405)
T ss_dssp ----------------CCCTTCC
T ss_pred ecCCCCcccccCCCceecCcccC
Confidence 8743221 22344677888876
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=213.34 Aligned_cols=158 Identities=23% Similarity=0.286 Sum_probs=90.3
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
++|+.|+|++|.+++..|..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..+..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 45666666666666665656666666666666666666655555666666666666666666555555555666666666
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
++|.+++..+..+..+++|+.|+|++|++++..+..|+.+++|++|+|++|++++..+..+..+++|++|+|++|.++
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 666655444444555555555555555555544445555555555555555555444444444444444444444443
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-25 Score=239.17 Aligned_cols=254 Identities=19% Similarity=0.157 Sum_probs=175.8
Q ss_pred EEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCC----cccCCCc-cCCEEecccCcCCccCccccCCC-----C
Q 035786 97 SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP----GSFGNLS-RLNVLYLSGNSLAGNVPATLGEL-----K 166 (693)
Q Consensus 97 ~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~ 166 (693)
+++++.|.++|.+|..+. ..++|++|||++|.+++..+ ..|.+++ +|++|+|++|.+++..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~-~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTS-IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHT-SCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHh-CCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 457788888888888764 25569999999999887766 6777888 89999999999887777776664 8
Q ss_pred CCCEEEccCCCCCCcCchhhhc----C-cCCCeeecccccCCCcCcccc----cC-CCCCCEEEccCCcccccCC----c
Q 035786 167 KLSNLDLSRNLLTGEIPNAISL----L-GNLTRLNLASNFFTGQIPSGL----YS-LSSIQFLNLSDNALTGFIP----S 232 (693)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~Ls~N~l~g~~p~~~----~~-l~~L~~L~Ls~N~l~g~~p----~ 232 (693)
+|++|+|++|.+++..+..+.. + ++|++|+|++|.+++..+..+ .. .++|++|+|++|++++..+ .
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 8999999999988777665444 3 788999999998876655443 33 3688888888888875333 3
Q ss_pred cccCCC-CCCEEEccCCcCcccCchhhhc----C-cccccccccccccccc----CCCcccCCCCCCCEEEccCCcCCCc
Q 035786 233 EVGNLD-KLIELDLSKNSISGSLPLELRG----L-RNLAKLVISENGLEGQ----LSEGLFPTLDQLQVVDLSGNKLDGA 302 (693)
Q Consensus 233 ~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~----l-~~L~~L~Ls~N~l~g~----i~~~~~~~l~~L~~L~Ls~N~l~g~ 302 (693)
.+..++ +|++|+|++|++++..+..+.. + ++|++|+|++|.+++. ++..+....++|+.|+|++|.+++.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 344554 8888888888888777655443 3 5888888888887652 3333222235788888888887765
Q ss_pred Cc----ccccCCCCCCEEEccCCcCcccCCc------cCcCCCCCCcEEEccCCcccee
Q 035786 303 LP----ATLFLRPNLRFLDLSRNNITGSWPI------LSTNGNASGAVFNISNNMLYGD 351 (693)
Q Consensus 303 ~p----~~l~~~~~L~~L~Ls~N~l~g~~p~------~~~~~~~~l~~l~ls~N~l~g~ 351 (693)
.+ ..+..+++|+.|+|++|++++..+. ..+..+..|+.||+++|.+.+.
T Consensus 241 ~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 241 SLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp CHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 44 3345567778888887775432211 1223444555666666665443
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.9e-25 Score=232.36 Aligned_cols=165 Identities=18% Similarity=0.141 Sum_probs=129.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC----CCcEEEEEEeccccc------------CHHHHHHHHHHHhcCCCCCccceeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA----GGTTVVVKKVSLHSF------------KKESYMMELDLFSRVSHARLVPLLGQ 575 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~----~g~~vavK~l~~~~~------------~~~~f~~Ei~~l~~l~H~niv~l~g~ 575 (693)
++|...+.||+|+||.||+|+.. ++..||||+...... ..+.+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 45777889999999999999975 578899999865432 12357789999999999999999999
Q ss_pred EEcC---CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 576 CLEH---ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 576 ~~~~---~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
+.+. +...++||||+ +|+|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 184 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG--------TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLL 184 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG--------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEE
Confidence 8752 35689999999 999999997532 489999999999999999999998 99999999999999
Q ss_pred CCCC--ceEECCcccccccCCCCc------ceeeeeehhhhhhh
Q 035786 653 DDKF--EVRLGSLSELHAQGDSHQ------NVLTRFLWRQLYQS 688 (693)
Q Consensus 653 d~~~--~~ki~Dfgla~~~~~~~~------~~~~~~~~~~~y~a 688 (693)
+.++ .+||+|||+++.+..... .......||+.|+|
T Consensus 185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~a 228 (345)
T 2v62_A 185 GYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTS 228 (345)
T ss_dssp ESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCC
T ss_pred ccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccC
Confidence 9887 999999999988632211 11133567777765
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-24 Score=235.39 Aligned_cols=163 Identities=20% Similarity=0.250 Sum_probs=128.8
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCC-----eeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET-----EKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-----~~~lv~ 587 (693)
.|...++||+|+||.||+|+..++..||||++..... ...+|+++++.++|||||+++++|..... ..++||
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 4777889999999999999987777799999864332 23369999999999999999999865322 267999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CCCceEECCcccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DKFEVRLGSLSEL 666 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~~~~ki~Dfgla 666 (693)
||++++.+....+... ....+++.....++.|+++||+|||+. +|+||||||+|||++ +++.+||+|||++
T Consensus 118 e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 118 EYVPETVYRASRHYAK-----LKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp ECCSEEHHHHHHHHHH-----TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eccCccHHHHHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 9999765443332111 114589999999999999999999998 999999999999999 7999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... ....++|++|+|
T Consensus 190 ~~~~~~~~--~~~~~~t~~y~a 209 (394)
T 4e7w_A 190 KILIAGEP--NVSYICSRYYRA 209 (394)
T ss_dssp EECCTTCC--CCSSCSCGGGCC
T ss_pred ccccCCCC--CcccccCcCccC
Confidence 98743322 233566777765
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-24 Score=227.85 Aligned_cols=152 Identities=18% Similarity=0.325 Sum_probs=127.8
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCC-CCCccceeEEEEc-------CCCe
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVS-HARLVPLLGQCLE-------HETE 582 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~-H~niv~l~g~~~~-------~~~~ 582 (693)
+|...++||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++.+++ |||||++++++.. ....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 577788999999999999996 46899999998554332 567899999999996 9999999999852 2234
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++|+||++ |+|.+++..... ...++|.++..|+.+++.||+|||.. .++|+||||||+|||+++++.+||+|
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKMES-----RGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHHT-----TCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred EEEEEEecC-CCHHHHHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEec
Confidence 789999996 899999875321 13599999999999999999999987 23499999999999999999999999
Q ss_pred cccccccCC
Q 035786 663 LSELHAQGD 671 (693)
Q Consensus 663 fgla~~~~~ 671 (693)
||+++....
T Consensus 182 fg~~~~~~~ 190 (337)
T 3ll6_A 182 FGSATTISH 190 (337)
T ss_dssp CTTCBCCSS
T ss_pred Cccceeccc
Confidence 999998743
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-24 Score=227.06 Aligned_cols=167 Identities=24% Similarity=0.371 Sum_probs=134.6
Q ss_pred HhCCCCccCccccCCeeeEEEEEe--CCCcEEEEEEecccccC---HHHHHHHHHHHhcC---CCCCccceeEEEEc---
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL--AGGTTVVVKKVSLHSFK---KESYMMELDLFSRV---SHARLVPLLGQCLE--- 578 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~--~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l---~H~niv~l~g~~~~--- 578 (693)
+.++|...+.||+|+||.||+|+. .+|+.||||++...... ...+.+|++++..+ +||||++++++|..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456788889999999999999997 46889999998643322 34677888887766 89999999999862
Q ss_pred -CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 579 -HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 579 -~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
.....++||||++ |+|.+++..... ..+++..+..++.+++.||+|||.. +|+||||||+||+++.++.
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~ 158 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE------PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQ 158 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCC
Confidence 2346789999998 799999976432 3489999999999999999999998 9999999999999999999
Q ss_pred eEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 658 VRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 658 ~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+||+|||+++....... .....+|+.|+|
T Consensus 159 ~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~a 187 (326)
T 1blx_A 159 IKLADFGLARIYSFQMA--LTSVVVTLWYRA 187 (326)
T ss_dssp EEECSCCSCCCCCGGGG--GCCCCCCCTTCC
T ss_pred EEEecCcccccccCCCC--ccccccccceeC
Confidence 99999999987643221 223445555544
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-24 Score=223.89 Aligned_cols=146 Identities=16% Similarity=0.249 Sum_probs=127.4
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
.|...+.||+|+||.||+|+.. +|+.||||.+..... ..+.+.+|++++.+++||||+++++++.+ +...++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 88 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-TTHYYLVMQLV 88 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECCC
T ss_pred cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-CCEEEEEEEcC
Confidence 4777889999999999999974 689999999975433 34678999999999999999999998875 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLSELH 667 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfgla~ 667 (693)
++|+|.+++... ..+++.....++.+++.||+|||.. +|+||||||+||++ ++++.+||+|||+++
T Consensus 89 ~~~~L~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 89 SGGELFDRILER--------GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp CSCBHHHHHHHH--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred CCccHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 999999999753 2489999999999999999999998 99999999999999 788999999999998
Q ss_pred ccC
Q 035786 668 AQG 670 (693)
Q Consensus 668 ~~~ 670 (693)
...
T Consensus 158 ~~~ 160 (304)
T 2jam_A 158 MEQ 160 (304)
T ss_dssp CCC
T ss_pred ecC
Confidence 753
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-24 Score=224.08 Aligned_cols=152 Identities=20% Similarity=0.200 Sum_probs=118.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|...++.++||||+++++++.+ ++..++||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-~~~~~lv~ 85 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-EGDVWICM 85 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSSEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-cCCEEEEE
Confidence 4577788999999999999996 57999999999654322 2334555566888999999999999875 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||++ |+|.++++.... ....+++..+..|+.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++
T Consensus 86 e~~~-~~l~~~l~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVID----KGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISG 158 (290)
T ss_dssp ECCS-EEHHHHHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC----
T ss_pred ehhc-cchHHHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcc
Confidence 9998 599888864211 1145999999999999999999999742 79999999999999999999999999998
Q ss_pred ccCC
Q 035786 668 AQGD 671 (693)
Q Consensus 668 ~~~~ 671 (693)
....
T Consensus 159 ~~~~ 162 (290)
T 3fme_A 159 YLVD 162 (290)
T ss_dssp ----
T ss_pred cccc
Confidence 7643
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-24 Score=234.02 Aligned_cols=160 Identities=11% Similarity=0.036 Sum_probs=116.7
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHH---HHHhcCCCCCcccee-------EEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMEL---DLFSRVSHARLVPLL-------GQCL 577 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei---~~l~~l~H~niv~l~-------g~~~ 577 (693)
.|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|+ +.+.+ +|||||+++ +++.
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhee
Confidence 4667889999999999999964 7899999999764432 45677885 55555 799988754 3332
Q ss_pred cCC----------------CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHH------HHHHHHHHHHHhhhccC
Q 035786 578 EHE----------------TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITR------LKIAIGAAEGLSYLHHE 635 (693)
Q Consensus 578 ~~~----------------~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r------~~ia~~ia~gl~yLH~~ 635 (693)
... ...++|||||+ |+|.++++... ..+.+..+ ..++.|+++||+|||+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-------~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~ 213 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-------FVYVFRGDEGILALHILTAQLIRLAANLQSK 213 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-------HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-------cccchhhhhhhhhHHHHHHHHHHHHHHHHHC
Confidence 211 23699999999 99999998642 13566667 88999999999999998
Q ss_pred CCCCeEecCCCCCCeeeCCCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 636 CNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 636 ~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|+||||||+|||+++++.+||+|||+++..+.... ...+|+.|+|
T Consensus 214 ---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~----~~~~t~~y~a 259 (371)
T 3q60_A 214 ---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP----ASSVPVTYAP 259 (371)
T ss_dssp ---TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE----GGGSCGGGCC
T ss_pred ---CCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc----CccCCcCCcC
Confidence 899999999999999999999999999998754321 2344466654
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-25 Score=238.65 Aligned_cols=263 Identities=23% Similarity=0.272 Sum_probs=156.2
Q ss_pred CCCCCCcceeecCCCEeEEEcCCCCcccccccCCccCccccccC--CCCCEEEccCCCCCCcCchHhhhCCCCccEEEec
Q 035786 49 EPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNL--TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLR 126 (693)
Q Consensus 49 ~~C~~W~gv~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L--~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls 126 (693)
..|..|.++.|+...++.+++++.... + ..+..+ +.++.+++++|.+.+..|..+ .+++|++|+|+
T Consensus 34 ~vc~~W~~~~~~~~~~~~l~l~~~~~~------~----~~~~~~~~~~l~~L~l~~n~l~~~~~~~~--~~~~L~~L~L~ 101 (336)
T 2ast_B 34 GVCKRWYRLASDESLWQTLDLTGKNLH------P----DVTGRLLSQGVIAFRCPRSFMDQPLAEHF--SPFRVQHMDLS 101 (336)
T ss_dssp SSCHHHHHHHTCSTTSSEEECTTCBCC------H----HHHHHHHHTTCSEEECTTCEECSCCCSCC--CCBCCCEEECT
T ss_pred HHHHHHHHHhcCchhheeeccccccCC------H----HHHHhhhhccceEEEcCCccccccchhhc--cCCCCCEEEcc
Confidence 347689999987656777887764211 1 133444 566677777776666655532 36777777777
Q ss_pred CCCCCcC-CCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCC-CCCCc-CchhhhcCcCCCeeecccc-cC
Q 035786 127 SCSLSGS-IPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRN-LLTGE-IPNAISLLGNLTRLNLASN-FF 202 (693)
Q Consensus 127 ~n~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l 202 (693)
+|.+++. +|..+.++++|++|+|++|.+++..|..++.+++|++|+|++| .+++. +|..+..+++|++|++++| .+
T Consensus 102 ~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l 181 (336)
T 2ast_B 102 NSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDF 181 (336)
T ss_dssp TCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTC
T ss_pred CCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCc
Confidence 7766654 5666666777777777777666666666666777777777776 55542 5555666667777777776 66
Q ss_pred CCc-CcccccCCC-CCCEEEccCC--ccc-ccCCccccCCCCCCEEEccCCc-CcccCchhhhcCcccccccccccc-cc
Q 035786 203 TGQ-IPSGLYSLS-SIQFLNLSDN--ALT-GFIPSEVGNLDKLIELDLSKNS-ISGSLPLELRGLRNLAKLVISENG-LE 275 (693)
Q Consensus 203 ~g~-~p~~~~~l~-~L~~L~Ls~N--~l~-g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~Ls~N~-l~ 275 (693)
++. ++..+..++ +|++|++++| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.
T Consensus 182 ~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~ 261 (336)
T 2ast_B 182 TEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII 261 (336)
T ss_dssp CHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCC
T ss_pred ChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCC
Confidence 543 455566666 6777777666 343 3445555666666666666666 555555566666666666666663 11
Q ss_pred ccCCCcccCCCCCCCEEEccCCcCCCcCcccccCC-CCCCEEEccCCcCcccCC
Q 035786 276 GQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR-PNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 276 g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~-~~L~~L~Ls~N~l~g~~p 328 (693)
.... ..+..+++|+.|++++| ++.. .+..+ .+++.|++++|++++..|
T Consensus 262 ~~~~-~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 262 PETL-LELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIAR 310 (336)
T ss_dssp GGGG-GGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTC
T ss_pred HHHH-HHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccC
Confidence 1100 02345566666666665 2221 11111 124444556666665555
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-23 Score=210.04 Aligned_cols=197 Identities=20% Similarity=0.248 Sum_probs=137.1
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCc-CCccCccccCCCCCCCEEEccC-CCCCCcCchhhhcCcCCCee
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNS-LAGNVPATLGELKKLSNLDLSR-NLLTGEIPNAISLLGNLTRL 195 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 195 (693)
++|++|+|++|++++..+..|+++++|++|+|++|. +++..+..|.++++|++|+|++ |.+++..+..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478888888888887777788888888888888886 7766666788888888888887 88886666677788888888
Q ss_pred ecccccCCCcCcccccCCCCCC---EEEccCC-cccccCCccccCCCCCC-EEEccCCcCcccCchhhhcCccccccccc
Q 035786 196 NLASNFFTGQIPSGLYSLSSIQ---FLNLSDN-ALTGFIPSEVGNLDKLI-ELDLSKNSISGSLPLELRGLRNLAKLVIS 270 (693)
Q Consensus 196 ~Ls~N~l~g~~p~~~~~l~~L~---~L~Ls~N-~l~g~~p~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 270 (693)
++++|.+++ +|. +..+++|+ .|++++| ++++..+..|.++++|+ +|++++|+++...+..+.. ++|++|+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 888888875 565 77777777 7777777 77766666677777777 7777777776332223333 566666666
Q ss_pred ccc-ccccCCCcccCCC-CCCCEEEccCCcCCCcCcccccCCCCCCEEEccCC
Q 035786 271 ENG-LEGQLSEGLFPTL-DQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRN 321 (693)
Q Consensus 271 ~N~-l~g~i~~~~~~~l-~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N 321 (693)
+|+ ++ .++...|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 188 ~n~~l~-~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLT-VIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCC-EECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCcc-cCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 663 55 3444445555 6666666666666543222 3455566655544
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=217.95 Aligned_cols=163 Identities=17% Similarity=0.303 Sum_probs=137.3
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc---cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS---FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++.+++||||+++++++.+ +...++|+
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 100 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFYIVG 100 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-CCeEEEEE
Confidence 45888899999999999999975 68999999986533 235689999999999999999999999875 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC---CceEECCcc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK---FEVRLGSLS 664 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~---~~~ki~Dfg 664 (693)
||+++|+|.+++... ..+++.++..++.+++.||+|||.. +|+||||||+||+++.+ ..+||+|||
T Consensus 101 e~~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg 169 (287)
T 2wei_A 101 ELYTGGELFDEIIKR--------KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG 169 (287)
T ss_dssp CCCCSCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred EccCCCCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccC
Confidence 999999999998753 2489999999999999999999998 99999999999999754 479999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+++....... .....+++.|+|
T Consensus 170 ~~~~~~~~~~--~~~~~~~~~y~a 191 (287)
T 2wei_A 170 LSTCFQQNTK--MKDRIGTAYYIA 191 (287)
T ss_dssp GGGTBCCCSS--CSCHHHHHTTCC
T ss_pred cceeecCCCc--cccccCcccccC
Confidence 9987643322 223456777765
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-24 Score=225.09 Aligned_cols=202 Identities=22% Similarity=0.227 Sum_probs=148.3
Q ss_pred CCCEEEccCCCCCCcCchhh--hcCcCCCeeecccccCCCcCc----ccccCCCCCCEEEccCCcccccCCccccCCCCC
Q 035786 167 KLSNLDLSRNLLTGEIPNAI--SLLGNLTRLNLASNFFTGQIP----SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKL 240 (693)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 240 (693)
+|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|+.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 34444444444444444444 445555555555555544333 234467778888888888877777888888888
Q ss_pred CEEEccCCcCccc--C--chhhhcCccccccccccccccc--cCCCcccCCCCCCCEEEccCCcCCCcCcccccCC---C
Q 035786 241 IELDLSKNSISGS--L--PLELRGLRNLAKLVISENGLEG--QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLR---P 311 (693)
Q Consensus 241 ~~L~Ls~N~l~g~--~--p~~~~~l~~L~~L~Ls~N~l~g--~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~---~ 311 (693)
++|+|++|++.+. + +..+..+++|++|+|++|+++. ..+..++..+++|++|+|++|++++..|..+..+ +
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~ 251 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSS 251 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCT
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcC
Confidence 8888888887653 2 2334789999999999999973 2222245678999999999999999988888776 6
Q ss_pred CCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCCccee
Q 035786 312 NLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSNYFQG 372 (693)
Q Consensus 312 ~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N~l~g 372 (693)
+|++|+|++|+|+ .+|... .++|+.|+|++|++++......+++|+.|+|++|+|+.
T Consensus 252 ~L~~L~Ls~N~l~-~lp~~~---~~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 252 ALNSLNLSFAGLE-QVPKGL---PAKLRVLDLSSNRLNRAPQPDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TCCCEECCSSCCC-SCCSCC---CSCCSCEECCSCCCCSCCCTTSCCCCSCEECSSTTTSC
T ss_pred cCCEEECCCCCCC-chhhhh---cCCCCEEECCCCcCCCCchhhhCCCccEEECcCCCCCC
Confidence 9999999999999 777543 27899999999999984223678999999999999864
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5e-24 Score=229.29 Aligned_cols=159 Identities=18% Similarity=0.295 Sum_probs=128.5
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCC-----e
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHET-----E 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-----~ 582 (693)
+.|...+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++.+++|||||+++++|...+. .
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 4577788999999999999986 46899999999754333 4678899999999999999999999875322 1
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||++ |+|.+++. ..+++..+..++.+++.||+|||.. +|+||||||+|||+++++.+||+|
T Consensus 122 ~~lv~e~~~-~~l~~~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~D 187 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG----------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILD 187 (371)
T ss_dssp CEEEEECCC-EEHHHHTT----------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECS
T ss_pred EEEEEcccc-ccHHHHhh----------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEe
Confidence 399999998 68888774 2389999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++...... +..++|++|+|
T Consensus 188 fg~a~~~~~~~----~~~~~t~~y~a 209 (371)
T 4exu_A 188 FGLARHADAEM----TGYVVTRWYRA 209 (371)
T ss_dssp TTCC------------CTTCCCTTSC
T ss_pred cCcccccccCc----CCcccCccccC
Confidence 99998764322 22445666654
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.8e-24 Score=234.37 Aligned_cols=165 Identities=16% Similarity=0.220 Sum_probs=134.6
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
++|...+.||+|+||.||+|+. .+++.||||.+..... .+++.+|++++..++|++.+..+.++.......++||||+
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 4678889999999999999996 5689999998765433 3458899999999988665555555544456789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee---CCCCceEECCccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL---DDKFEVRLGSLSELH 667 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl---d~~~~~ki~Dfgla~ 667 (693)
+|+|.++++... ..++|.++..|+.||+.||+|||.. +||||||||+|||+ ++++.+||+|||+++
T Consensus 86 -g~sL~~ll~~~~-------~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 86 -GPSLEDLFNFCS-------RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp -CCBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred -CCCHHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 999999997532 3599999999999999999999998 99999999999999 688999999999999
Q ss_pred ccCCCCcc------eeeeeehhhhhhh
Q 035786 668 AQGDSHQN------VLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~------~~~~~~~~~~y~a 688 (693)
.+...... ......||+.|+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~a 181 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYAS 181 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCC
T ss_pred eccCCccccccccccccccCCCccccC
Confidence 87443221 1224678888876
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-24 Score=222.36 Aligned_cols=148 Identities=22% Similarity=0.363 Sum_probs=121.0
Q ss_pred CCCCccCccccCCeeeEEEEEeC--CCc--EEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA--GGT--TVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~--~g~--~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
++|...+.||+|+||.||+|++. +++ .||||++..... ..++|.+|++++.+++||||+++++++.+ ...
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 95 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT--PPM 95 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSC
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc--CCc
Confidence 34777889999999999999863 333 699999865321 24679999999999999999999998875 348
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
++|+||+++|+|.+++.... ..+++.++.+++.++++||+|||+. +|+||||||+||++++++.+||+||
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Df 165 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ-------GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 165 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG-------GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCC
T ss_pred eeeEecccCCCHHHHHHhcc-------CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccc
Confidence 89999999999999997532 2489999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCC
Q 035786 664 SELHAQGD 671 (693)
Q Consensus 664 gla~~~~~ 671 (693)
|+++....
T Consensus 166 g~~~~~~~ 173 (291)
T 1u46_A 166 GLMRALPQ 173 (291)
T ss_dssp TTCEECCC
T ss_pred cccccccc
Confidence 99988743
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.9e-24 Score=223.91 Aligned_cols=162 Identities=15% Similarity=0.221 Sum_probs=135.3
Q ss_pred CCCCccCccccCCeeeEEEEEe--CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCC------ccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL--AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHAR------LVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~--~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~n------iv~l~g~~~~~~~~~ 583 (693)
++|...+.||+|+||.||+|.. .+|+.||||++.......+.+.+|++++.+++|++ ++++++++.+ ++..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~-~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH-HGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE-TTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc-CCcE
Confidence 3577788999999999999986 46899999999765444577899999999987765 9999998875 4688
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---------
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD--------- 654 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~--------- 654 (693)
++||||+ +|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGF------LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTT------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC-
T ss_pred EEEEcCC-CCCHHHHHHhcCC------CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCC
Confidence 9999999 8999999976432 3589999999999999999999998 9999999999999997
Q ss_pred ----------CCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 655 ----------KFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 655 ----------~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++.+||+|||+++....... ...||+.|+|
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~----~~~gt~~y~a 202 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDEHHS----TLVSTRHYRA 202 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTSCCC----SSCSCGGGCC
T ss_pred ccccccccccCCCceEeeCcccccCccccc----cccCCccccC
Confidence 67899999999988644322 2456666665
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.2e-24 Score=225.91 Aligned_cols=159 Identities=18% Similarity=0.294 Sum_probs=128.6
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCC-----e
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHET-----E 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~-----~ 582 (693)
++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++.+++|||||++++++...+. .
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 4567778999999999999996 46999999999654332 4578999999999999999999999865322 2
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||++ |+|.+++. ..+++.++..++.+++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 104 ~~lv~e~~~-~~l~~~~~----------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~D 169 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG----------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILD 169 (353)
T ss_dssp CEEEEECCS-EEGGGTTT----------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECS
T ss_pred EEEEecccc-CCHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEee
Confidence 489999998 68988774 2389999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++...... +...+|++|+|
T Consensus 170 fg~~~~~~~~~----~~~~~t~~y~a 191 (353)
T 3coi_A 170 FGLARHADAEM----TGYVVTRWYRA 191 (353)
T ss_dssp TTCTTC------------CCSBCCSC
T ss_pred cccccCCCCCc----cccccCcCcCC
Confidence 99998764322 22345555544
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.1e-24 Score=230.16 Aligned_cols=164 Identities=23% Similarity=0.297 Sum_probs=133.8
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCC--------CCCccceeEEEEc---C
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVS--------HARLVPLLGQCLE---H 579 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~--------H~niv~l~g~~~~---~ 579 (693)
++|...+.||+|+||.||+|+. .+++.||||++.......+.+.+|++++.+++ |+|||++++++.. .
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~ 116 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVN 116 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETT
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCC
Confidence 4577888999999999999985 56899999999765444678999999999996 7889999998862 2
Q ss_pred CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC---
Q 035786 580 ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF--- 656 (693)
Q Consensus 580 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~--- 656 (693)
....++||||+ +|+|.+++..... ..+++..+..|+.|++.||+|||+.+ +|+||||||+|||++.++
T Consensus 117 ~~~~~lv~e~~-~~~l~~~~~~~~~------~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 117 GTHICMVFEVL-GHHLLKWIIKSNY------QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EEEEEEEECCC-CCBHHHHHHHTTT------SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred CceEEEEEecc-CccHHHHHHhccc------CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 34688999999 5677777654321 35899999999999999999999854 799999999999999775
Q ss_pred ----------------------------------------------ceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 657 ----------------------------------------------EVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 657 ----------------------------------------------~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+||+|||+++...... +..+||++|+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~----~~~~gt~~y~a 261 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF----TEDIQTRQYRS 261 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS----CSCCSCGGGCC
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC----ccCCCCCcccC
Confidence 89999999999874332 23467777765
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-25 Score=239.91 Aligned_cols=208 Identities=18% Similarity=0.190 Sum_probs=94.6
Q ss_pred CCCccEEEecCCCCCcCC----CcccCCCccCCEEecccC---cCCccCcccc-------CCCCCCCEEEccCCCCCC--
Q 035786 117 LPALQVLDLRSCSLSGSI----PGSFGNLSRLNVLYLSGN---SLAGNVPATL-------GELKKLSNLDLSRNLLTG-- 180 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~----p~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~Ls~N~l~~-- 180 (693)
+++|++|+|++|.+++.. +..|.++++|++|+|++| ++.+.+|..+ ..+++|++|+|++|.+++
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 555555555555555432 223445555555555553 3333444333 455555555555555554
Q ss_pred --cCchhhhcCcCCCeeecccccCCCcCcccc----cCC---------CCCCEEEccCCccc-ccCC---ccccCCCCCC
Q 035786 181 --EIPNAISLLGNLTRLNLASNFFTGQIPSGL----YSL---------SSIQFLNLSDNALT-GFIP---SEVGNLDKLI 241 (693)
Q Consensus 181 --~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~----~~l---------~~L~~L~Ls~N~l~-g~~p---~~~~~l~~L~ 241 (693)
.+|..+..+++|++|+|++|.+++..+..+ ..+ ++|++|+|++|+++ +.+| ..+..+++|+
T Consensus 111 ~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 190 (386)
T 2ca6_A 111 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH 190 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcC
Confidence 345555555555555555555543222222 222 45555555555554 2222 2334444555
Q ss_pred EEEccCCcCc--c---cCchhhhcCcccccccccccccc----ccCCCcccCCCCCCCEEEccCCcCCCc----Cccccc
Q 035786 242 ELDLSKNSIS--G---SLPLELRGLRNLAKLVISENGLE----GQLSEGLFPTLDQLQVVDLSGNKLDGA----LPATLF 308 (693)
Q Consensus 242 ~L~Ls~N~l~--g---~~p~~~~~l~~L~~L~Ls~N~l~----g~i~~~~~~~l~~L~~L~Ls~N~l~g~----~p~~l~ 308 (693)
+|++++|+++ | ..|..+..+++|++|+|++|.++ +.+|.. +..+++|+.|+|++|++++. +|..+.
T Consensus 191 ~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~-l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~ 269 (386)
T 2ca6_A 191 TVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA-LKSWPNLRELGLNDCLLSARGAAAVVDAFS 269 (386)
T ss_dssp EEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH-GGGCTTCCEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH-HccCCCcCEEECCCCCCchhhHHHHHHHHh
Confidence 5555555544 1 12223444444444444444443 222221 23344444444444444433 233331
Q ss_pred --CCCCCCEEEccCCcCcc
Q 035786 309 --LRPNLRFLDLSRNNITG 325 (693)
Q Consensus 309 --~~~~L~~L~Ls~N~l~g 325 (693)
.+++|+.|+|++|++++
T Consensus 270 ~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 270 KLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp TCSSCCCCEEECCSSCCBH
T ss_pred hccCCCeEEEECcCCcCCH
Confidence 24444444444444443
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-24 Score=224.85 Aligned_cols=164 Identities=18% Similarity=0.300 Sum_probs=130.7
Q ss_pred hCCCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
.++|...+.||+|+||.||+|+..+ .||||++..... ..+.|.+|++++.+++||||+++++++.+ +...++||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~iv~ 108 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-PPHLAIIT 108 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-SSCEEEEC
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-CCceEEEe
Confidence 3557788999999999999999854 599999865332 24568899999999999999999999986 45789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.++++... ..+++.++..++.+++.||+|||+. +|+||||||+||+++ ++.+||+|||+++
T Consensus 109 e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~ 177 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAK-------IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFS 177 (319)
T ss_dssp BCCCSEEHHHHTTSSC-------CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC
T ss_pred ecccCCcHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcc
Confidence 9999999999997532 3589999999999999999999998 999999999999998 6799999999988
Q ss_pred ccCCC----Ccceeeeeehhhhhhh
Q 035786 668 AQGDS----HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~----~~~~~~~~~~~~~y~a 688 (693)
..+.. .........|++.|+|
T Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~y~a 202 (319)
T 2y4i_B 178 ISGVLQAGRREDKLRIQNGWLCHLA 202 (319)
T ss_dssp ----------CCSCBCCSGGGGTSC
T ss_pred ccccccccccccccccCCCcccccC
Confidence 75221 1111233456777765
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-23 Score=207.69 Aligned_cols=203 Identities=20% Similarity=0.232 Sum_probs=163.8
Q ss_pred CCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCC-CCCcCchhhhcCcCCCeeeccc-ccCCCcCcccc
Q 035786 133 SIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL-LTGEIPNAISLLGNLTRLNLAS-NFFTGQIPSGL 210 (693)
Q Consensus 133 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~ 210 (693)
.+|. +. ++|++|+|++|++++..+..|.++++|++|++++|. +++..+..|..+++|++|++++ |.+++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 43 389999999999998777789999999999999997 8766666889999999999998 99987777788
Q ss_pred cCCCCCCEEEccCCcccccCCccccCCCCCC---EEEccCC-cCcccCchhhhcCcccc-ccccccccccccCCCcccCC
Q 035786 211 YSLSSIQFLNLSDNALTGFIPSEVGNLDKLI---ELDLSKN-SISGSLPLELRGLRNLA-KLVISENGLEGQLSEGLFPT 285 (693)
Q Consensus 211 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~---~L~Ls~N-~l~g~~p~~~~~l~~L~-~L~Ls~N~l~g~i~~~~~~~ 285 (693)
..+++|++|++++|++++ +|. +..+++|+ +|++++| .+++..+..|.++++|+ +|++++|+++ .+|...|..
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~ 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG 178 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC
Confidence 899999999999999987 666 88888888 9999999 88877777788888898 9999888887 677766665
Q ss_pred CCCCCEEEccCCc-CCCcCcccccCC-CCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCC
Q 035786 286 LDQLQVVDLSGNK-LDGALPATLFLR-PNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNN 346 (693)
Q Consensus 286 l~~L~~L~Ls~N~-l~g~~p~~l~~~-~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N 346 (693)
++|+.|++++|+ +++..+..+..+ ++|+.|++++|+++ .+|.. .+..++.|+++++
T Consensus 179 -~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 179 -TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp -CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT---TCTTCSEEECTTC
T ss_pred -CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh---HhccCceeeccCc
Confidence 788888888884 886666777777 88888888888887 34432 3445555555544
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-25 Score=238.83 Aligned_cols=241 Identities=19% Similarity=0.260 Sum_probs=199.1
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhh---hCCCCccEEEecCC---CCCcCCCccc-------CCCccCCEEecccCcC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFG---YRLPALQVLDLRSC---SLSGSIPGSF-------GNLSRLNVLYLSGNSL 154 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~---~~l~~L~~L~Ls~n---~l~g~~p~~~-------~~l~~L~~L~Ls~N~l 154 (693)
.+..++.|+.|++++|.+.+..+..++ ..+++|++|+|++| .+++.+|..+ .++++|++|+|++|.+
T Consensus 27 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l 106 (386)
T 2ca6_A 27 VLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAF 106 (386)
T ss_dssp HHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCC
T ss_pred HHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcC
Confidence 567788999999999998876554432 24899999999996 5566677655 7899999999999999
Q ss_pred Cc----cCccccCCCCCCCEEEccCCCCCCcCchh----hhcC---------cCCCeeecccccCC-CcCc---ccccCC
Q 035786 155 AG----NVPATLGELKKLSNLDLSRNLLTGEIPNA----ISLL---------GNLTRLNLASNFFT-GQIP---SGLYSL 213 (693)
Q Consensus 155 ~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l---------~~L~~L~Ls~N~l~-g~~p---~~~~~l 213 (693)
.+ .+|..+..+++|++|+|++|.+++..+.. +..+ ++|++|+|++|.++ +.+| ..+..+
T Consensus 107 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 186 (386)
T 2ca6_A 107 GPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 186 (386)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhC
Confidence 97 57888999999999999999997544443 4444 89999999999998 4555 467789
Q ss_pred CCCCEEEccCCccc--c---cCCccccCCCCCCEEEccCCcCc----ccCchhhhcCcccccccccccccccc----CCC
Q 035786 214 SSIQFLNLSDNALT--G---FIPSEVGNLDKLIELDLSKNSIS----GSLPLELRGLRNLAKLVISENGLEGQ----LSE 280 (693)
Q Consensus 214 ~~L~~L~Ls~N~l~--g---~~p~~~~~l~~L~~L~Ls~N~l~----g~~p~~~~~l~~L~~L~Ls~N~l~g~----i~~ 280 (693)
++|+.|+|++|+++ | .+|..+..+++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ++.
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 266 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHH
Confidence 99999999999998 3 45557889999999999999997 67888999999999999999999865 343
Q ss_pred cc-cCCCCCCCEEEccCCcCCC----cCcccc-cCCCCCCEEEccCCcCcccCC
Q 035786 281 GL-FPTLDQLQVVDLSGNKLDG----ALPATL-FLRPNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 281 ~~-~~~l~~L~~L~Ls~N~l~g----~~p~~l-~~~~~L~~L~Ls~N~l~g~~p 328 (693)
.+ ...+++|+.|+|++|.+++ .+|..+ .++++|+.|+|++|++++..|
T Consensus 267 ~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 267 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 32 1337899999999999998 588877 568999999999999987654
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-24 Score=229.36 Aligned_cols=222 Identities=24% Similarity=0.251 Sum_probs=152.5
Q ss_pred CCCEEEccCCCCCCcCchHhhhCC--CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCcc-CccccCCCCCCCE
Q 035786 94 LLSSFNASGLSLPGSIPEWFGYRL--PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGN-VPATLGELKKLSN 170 (693)
Q Consensus 94 ~L~~L~ls~~~l~g~ip~~~~~~l--~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~ 170 (693)
.++.++++++.+. |..+.. + ++++.|++++|.+.+..+. +.++++|++|+|++|.+++. +|..+..+++|++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~-~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGR-LLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHH-HHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeeccccccCC---HHHHHh-hhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 3677888877765 344433 5 7888888888888776655 55688888888888887765 7777788888888
Q ss_pred EEccCCCCCCcCchhhhcCcCCCeeecccc-cCCCc-CcccccCCCCCCEEEccCC-ccccc-CCccccCCC-CCCEEEc
Q 035786 171 LDLSRNLLTGEIPNAISLLGNLTRLNLASN-FFTGQ-IPSGLYSLSSIQFLNLSDN-ALTGF-IPSEVGNLD-KLIELDL 245 (693)
Q Consensus 171 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~-~L~~L~L 245 (693)
|+|++|.+++..|..+..+++|++|++++| .+++. +|..+..+++|++|++++| .+++. ++..+..++ +|++|++
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 888888887777777878888888888888 56652 5666777778888888887 77654 456667777 7777777
Q ss_pred cCC--cCc-ccCchhhhcCcccccccccccc-ccccCCCcccCCCCCCCEEEccCCc-CCCcCcccccCCCCCCEEEccC
Q 035786 246 SKN--SIS-GSLPLELRGLRNLAKLVISENG-LEGQLSEGLFPTLDQLQVVDLSGNK-LDGALPATLFLRPNLRFLDLSR 320 (693)
Q Consensus 246 s~N--~l~-g~~p~~~~~l~~L~~L~Ls~N~-l~g~i~~~~~~~l~~L~~L~Ls~N~-l~g~~p~~l~~~~~L~~L~Ls~ 320 (693)
++| .++ +.+|..+..+++|++|++++|. +++..+.. +..+++|+.|++++|. ++......+..+++|+.|++++
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~-l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~ 281 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQE-FFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFG 281 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGG-GGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTT
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHH-HhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccC
Confidence 777 454 4556666677777777777776 55444443 3556666677776664 2211112455566666666666
Q ss_pred C
Q 035786 321 N 321 (693)
Q Consensus 321 N 321 (693)
|
T Consensus 282 ~ 282 (336)
T 2ast_B 282 I 282 (336)
T ss_dssp S
T ss_pred c
Confidence 5
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-23 Score=219.70 Aligned_cols=164 Identities=18% Similarity=0.186 Sum_probs=131.1
Q ss_pred hCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---HHHHHHHHHHHhcCC--CCCccceeEEEEcCCCeeEE
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVS--HARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~~l 585 (693)
.+.|...+.||+|+||.||+|+..+++.||||++...... .+.|.+|++++.+++ |+||+++++++.+ +...++
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~l 105 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYM 105 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC-SSEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec-CCEEEE
Confidence 3457778899999999999999888999999999654332 467899999999997 5999999999876 467899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
||| +.+|+|.+++... ..+++..+..++.++++||+|||.. +|+||||||+||++++ +.+||+|||+
T Consensus 106 v~e-~~~~~L~~~l~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~ 172 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKK--------KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGI 172 (313)
T ss_dssp EEC-CCSEEHHHHHHHC--------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSS
T ss_pred EEe-cCCCcHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccc
Confidence 999 5688999999753 2489999999999999999999998 9999999999999974 8999999999
Q ss_pred ccccCCCCc-ceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
++....... .......||+.|+|
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~a 196 (313)
T 3cek_A 173 ANQMQPDTTSVVKDSQVGTVNYMP 196 (313)
T ss_dssp SCC--------------CCGGGCC
T ss_pred cccccCccccccccCCCCCCCcCC
Confidence 988743221 11233456666665
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.5e-25 Score=234.52 Aligned_cols=255 Identities=20% Similarity=0.189 Sum_probs=203.4
Q ss_pred EEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCc----cccCCCC-CCCEEEccCCCCCCcCchhhhcC-----cC
Q 035786 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVP----ATLGELK-KLSNLDLSRNLLTGEIPNAISLL-----GN 191 (693)
Q Consensus 122 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 191 (693)
+++|+.|.++|.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999999999988888889999999999998777 7788898 99999999999998888888775 99
Q ss_pred CCeeecccccCCCcCccccc----CC-CCCCEEEccCCcccccCCcccc----C-CCCCCEEEccCCcCcccC----chh
Q 035786 192 LTRLNLASNFFTGQIPSGLY----SL-SSIQFLNLSDNALTGFIPSEVG----N-LDKLIELDLSKNSISGSL----PLE 257 (693)
Q Consensus 192 L~~L~Ls~N~l~g~~p~~~~----~l-~~L~~L~Ls~N~l~g~~p~~~~----~-l~~L~~L~Ls~N~l~g~~----p~~ 257 (693)
|++|+|++|.+++..+..+. .+ ++|+.|+|++|++++..+..+. . .++|++|+|++|.+++.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 99999999999987776444 44 8999999999999887665543 3 369999999999999644 444
Q ss_pred hhcCc-cccccccccccccccCCCcc---cCCC-CCCCEEEccCCcCCCc----CcccccC-CCCCCEEEccCCcCcccC
Q 035786 258 LRGLR-NLAKLVISENGLEGQLSEGL---FPTL-DQLQVVDLSGNKLDGA----LPATLFL-RPNLRFLDLSRNNITGSW 327 (693)
Q Consensus 258 ~~~l~-~L~~L~Ls~N~l~g~i~~~~---~~~l-~~L~~L~Ls~N~l~g~----~p~~l~~-~~~L~~L~Ls~N~l~g~~ 327 (693)
+..++ +|++|+|++|++++..+..+ +... ++|+.|+|++|.+++. ++..+.. .++|+.|+|++|++++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 56665 99999999999986554321 2344 5999999999999873 4555655 469999999999998643
Q ss_pred C---ccCcCCCCCCcEEEccCCccceecC-------C--CCCCCCCEEEccCCcceeecCC
Q 035786 328 P---ILSTNGNASGAVFNISNNMLYGDLN-------S--SSFRKFSLIDLSSNYFQGTVAD 376 (693)
Q Consensus 328 p---~~~~~~~~~l~~l~ls~N~l~g~~~-------~--~~~~~l~~ldLs~N~l~g~ip~ 376 (693)
+ ......+..|+.|++++|.+.+..+ . ..+++|+.||+++|.+.+..|.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 3 1234667889999999999543211 1 3567788999999998876544
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-23 Score=221.65 Aligned_cols=163 Identities=20% Similarity=0.243 Sum_probs=135.8
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-------CHHHHHHHHHHHhcCC--CCCccceeEEEEcCC
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-------KKESYMMELDLFSRVS--HARLVPLLGQCLEHE 580 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l~--H~niv~l~g~~~~~~ 580 (693)
.++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++.+++ |+||+++++++.+ +
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~-~ 120 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER-P 120 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC-S
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec-C
Confidence 34577888999999999999985 5789999999965432 1246788999999996 5999999999875 4
Q ss_pred CeeEEEEccCCC-CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CCCce
Q 035786 581 TEKLLVYKYMVC-GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DKFEV 658 (693)
Q Consensus 581 ~~~~lv~ey~~~-GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~~~~ 658 (693)
+..++|+||+.+ |+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~--------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 189 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITER--------GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGEL 189 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHH--------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEE
T ss_pred CcEEEEEEcCCCCccHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCE
Confidence 678999999986 9999999753 2489999999999999999999998 999999999999999 78999
Q ss_pred EECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|||+++...+.. .....||+.|+|
T Consensus 190 kL~Dfg~~~~~~~~~---~~~~~gt~~y~a 216 (320)
T 3a99_A 190 KLIDFGSGALLKDTV---YTDFDGTRVYSP 216 (320)
T ss_dssp EECCCTTCEECCSSC---BCCCCSCGGGSC
T ss_pred EEeeCcccccccccc---ccCCCCCccCCC
Confidence 999999999875432 223456666665
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-23 Score=219.40 Aligned_cols=168 Identities=20% Similarity=0.235 Sum_probs=123.5
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHH-HHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELD-LFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|... +|+.||||++...... .+++.+|+. +++.++|||||++++++.+ ++..++||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-~~~~~lv~ 100 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-EGDCWICM 100 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-CCceEEEE
Confidence 45677889999999999999974 6899999999754322 345666766 7788899999999999886 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++ +|.+++..... .....+++..+.+++.+++.||.|||+. ++|+||||||+||++++++.+||+|||+++
T Consensus 101 e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYS---VLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISG 174 (327)
T ss_dssp CCCSE-EHHHHHHHHHH---TTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred eecCC-ChHHHHHHHHh---hhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence 99985 88888763110 0114589999999999999999999974 279999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... .+...||+.|+|
T Consensus 175 ~~~~~~~--~~~~~gt~~y~a 193 (327)
T 3aln_A 175 QLVDSIA--KTRDAGCRPYMA 193 (327)
T ss_dssp C--------------------
T ss_pred ecccccc--cccCCCCccccC
Confidence 8743322 223356666665
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-23 Score=214.52 Aligned_cols=142 Identities=11% Similarity=0.051 Sum_probs=123.6
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
+.|...+.||+|+||.||+|+.. +|+.||||.+...... .+.|.+|++++.+++|||||++++++.+ ++..++|
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv 109 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-RAGGLVV 109 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-CCcEEEE
Confidence 34777889999999999999975 5899999999764432 3679999999999999999999999876 4688999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++.. ....+..+|+.|++.||+|||+. +|+||||||+|||+++++.+||+++|..
T Consensus 110 ~e~~~g~~L~~~l~~~----------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~ 176 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS----------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATM 176 (286)
T ss_dssp EECCCEEEHHHHHTTC----------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCC
T ss_pred EEecCCCCHHHHHhcC----------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecccc
Confidence 9999999999998531 34556888999999999999998 9999999999999999999999988764
Q ss_pred c
Q 035786 667 H 667 (693)
Q Consensus 667 ~ 667 (693)
.
T Consensus 177 ~ 177 (286)
T 3uqc_A 177 P 177 (286)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-23 Score=231.75 Aligned_cols=166 Identities=14% Similarity=0.206 Sum_probs=121.8
Q ss_pred CccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccCCCC
Q 035786 515 SETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYMVCG 593 (693)
Q Consensus 515 ~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~~~G 593 (693)
...++||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++.+ +...++||||+. |
T Consensus 18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-~~~~~lv~E~~~-g 93 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETT-DRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEECCCS-E
T ss_pred eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEec-CCeEEEEEecCC-C
Confidence 3457899999999987766679999999986432 45688999999886 89999999998865 467899999995 7
Q ss_pred ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-------------CCceEE
Q 035786 594 DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-------------KFEVRL 660 (693)
Q Consensus 594 sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~-------------~~~~ki 660 (693)
+|.+++....... ......++..+..|+.||+.||+|||+. +|+||||||+|||++. ++.+||
T Consensus 94 sL~~~l~~~~~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 94 NLQDLVESKNVSD-ENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EHHHHHHTC-------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CHHHHHhccCCCc-hhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 9999997643211 0011124445678999999999999998 9999999999999965 458999
Q ss_pred CCcccccccCCCCcc---eeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQN---VLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~---~~~~~~~~~~y~a 688 (693)
+|||+++........ ..+...||++|+|
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~a 200 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRA 200 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSC
T ss_pred cccccceecCCCCccceeeecCCCCCCCccC
Confidence 999999987543221 1234567777776
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.5e-24 Score=222.49 Aligned_cols=164 Identities=20% Similarity=0.232 Sum_probs=130.5
Q ss_pred HhCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-------CHHHHHHHHHHHhcC----CCCCccceeEEEE
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-------KKESYMMELDLFSRV----SHARLVPLLGQCL 577 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l----~H~niv~l~g~~~ 577 (693)
..++|...+.||+|+||.||+|+. .+|+.||||++..... ....+.+|++++.++ +|+||+++++++.
T Consensus 29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 345688899999999999999986 5689999999965432 123567799999998 8999999999886
Q ss_pred cCCCeeEEEEcc-CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CC
Q 035786 578 EHETEKLLVYKY-MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DK 655 (693)
Q Consensus 578 ~~~~~~~lv~ey-~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~ 655 (693)
+ ++..++|+|| +++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++ ++
T Consensus 109 ~-~~~~~~v~e~~~~~~~L~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 176 (312)
T 2iwi_A 109 T-QEGFMLVLERPLPAQDLFDYITEKG--------PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRR 176 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTT
T ss_pred c-CCeEEEEEEecCCCCCHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCC
Confidence 5 4578999999 89999999997632 489999999999999999999998 999999999999999 88
Q ss_pred CceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 656 FEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 656 ~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+.+||+|||+++...... .....|++.|+|
T Consensus 177 ~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~a 206 (312)
T 2iwi_A 177 GCAKLIDFGSGALLHDEP---YTDFDGTRVYSP 206 (312)
T ss_dssp TEEEECCCSSCEECCSSC---BCCCCSCTTTSC
T ss_pred CeEEEEEcchhhhcccCc---ccccCCcccccC
Confidence 999999999999874432 123445555554
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-23 Score=223.75 Aligned_cols=165 Identities=18% Similarity=0.244 Sum_probs=134.1
Q ss_pred hCCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCC-----ccceeEEEEcCCCee
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HAR-----LVPLLGQCLEHETEK 583 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~n-----iv~l~g~~~~~~~~~ 583 (693)
.++|...+.||+|+||.||+|+.. +++.||||++.......+++.+|++++..++ |++ ||++.+++.. ++..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE-TTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc-CCce
Confidence 456888899999999999999864 6889999999754434567888999998885 553 9999998876 4689
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC--CCCceEEC
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD--DKFEVRLG 661 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld--~~~~~ki~ 661 (693)
++||||++ |+|.+++..... ..+++..+..++.|++.||+|||.+ ..+||||||||+|||++ .++.+||+
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNF------RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTT------SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred EEEEecCC-CCHHHHHhhcCc------CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 99999996 599999976432 3489999999999999999999953 23899999999999994 57889999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++..+... ....||++|+|
T Consensus 204 DFG~a~~~~~~~----~~~~~t~~y~a 226 (382)
T 2vx3_A 204 DFGSSCQLGQRI----YQYIQSRFYRS 226 (382)
T ss_dssp CCTTCEETTCCC----CSSCSCGGGCC
T ss_pred eccCceeccccc----ccccCCccccC
Confidence 999999875432 22456666665
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=9.1e-24 Score=231.64 Aligned_cols=163 Identities=13% Similarity=0.169 Sum_probs=125.1
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
..|...++||+|+||.||.....+|+.||||++.... .+.+.+|++++.++ +|||||++++++.+ +...++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~-~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKD-RQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEE-TTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEec-CCEEEEEEECC
Confidence 3477788999999999665555678999999996532 23467899999999 89999999998875 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-----CCCceEECCccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-----DKFEVRLGSLSE 665 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-----~~~~~ki~Dfgl 665 (693)
+ |+|.+++..... ...+.+...++.||++||+|||+. +|+||||||+|||++ ....+||+|||+
T Consensus 101 ~-g~L~~~l~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~ 169 (432)
T 3p23_A 101 A-ATLQEYVEQKDF-------AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169 (432)
T ss_dssp S-EEHHHHHHSSSC-------CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred C-CCHHHHHHhcCC-------CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence 7 699999975432 234445678999999999999998 899999999999994 334688999999
Q ss_pred ccccCCCC--cceeeeeehhhhhhh
Q 035786 666 LHAQGDSH--QNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~--~~~~~~~~~~~~y~a 688 (693)
++...... ....+..+||++|+|
T Consensus 170 a~~~~~~~~~~~~~~~~~gt~~y~A 194 (432)
T 3p23_A 170 CKKLAVGRHSFSRRSGVPGTEGWIA 194 (432)
T ss_dssp EECC------------CCSCTTSCC
T ss_pred eeeccCCCcceeeccccCCCcCccC
Confidence 99874322 122344678888876
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-23 Score=219.70 Aligned_cols=162 Identities=15% Similarity=0.222 Sum_probs=118.5
Q ss_pred CCCCc-cCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcC---CCeeEEE
Q 035786 512 GNFSE-TNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEH---ETEKLLV 586 (693)
Q Consensus 512 ~~~~~-~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~---~~~~~lv 586 (693)
++|.. .++||+|+||.||+|+.. +|+.||||++.......+ +....+..++||||+++++++... +...++|
T Consensus 28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 104 (336)
T 3fhr_A 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104 (336)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence 45666 457999999999999975 689999999865322122 222345667999999999988541 2347899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECCc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGSL 663 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~Df 663 (693)
|||+++|+|.+++..... ..+++.++..++.+++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 105 ~e~~~gg~L~~~l~~~~~------~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 105 MECMEGGELFSRIQERGD------QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EECCTTEEHHHHHHTC-C------CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred EeccCCCCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 999999999999985432 3599999999999999999999998 9999999999999986 456999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+++...... .....+|+.|+|
T Consensus 176 g~~~~~~~~~---~~~~~~t~~y~a 197 (336)
T 3fhr_A 176 GFAKETTQNA---LQTPCYTPYYVA 197 (336)
T ss_dssp TTCEEC-------------------
T ss_pred ccceeccccc---cccCCCCcCccC
Confidence 9998764322 223456666665
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.3e-23 Score=213.80 Aligned_cols=147 Identities=17% Similarity=0.224 Sum_probs=125.5
Q ss_pred CCCcc-CccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHH-hcCCCCCccceeEEEEc---CCCeeEEE
Q 035786 513 NFSET-NLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLF-SRVSHARLVPLLGQCLE---HETEKLLV 586 (693)
Q Consensus 513 ~~~~~-~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l-~~l~H~niv~l~g~~~~---~~~~~~lv 586 (693)
+|... ++||+|+||.||+|.. .+++.||||++.. .+.+.+|++++ ...+||||+++++++.. .+...++|
T Consensus 18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 93 (299)
T 3m2w_A 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 93 (299)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEE
Confidence 34444 6799999999999986 5689999999863 34578899988 66699999999998754 13467899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECCc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGSL 663 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~Df 663 (693)
|||+++|+|.+++..... ..+++.++..++.+++.||+|||.. +|+||||||+||+++. ++.+||+||
T Consensus 94 ~e~~~~~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 94 MECLDGGELFSRIQDRGD------QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp ECCCCSCBHHHHHHHCTT------CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EeecCCCcHHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 999999999999986432 3599999999999999999999998 9999999999999998 789999999
Q ss_pred ccccccCCC
Q 035786 664 SELHAQGDS 672 (693)
Q Consensus 664 gla~~~~~~ 672 (693)
|+++.....
T Consensus 165 g~a~~~~~~ 173 (299)
T 3m2w_A 165 GFAKETTGE 173 (299)
T ss_dssp TTCEECTTC
T ss_pred ccccccccc
Confidence 999887543
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-23 Score=235.77 Aligned_cols=150 Identities=15% Similarity=0.183 Sum_probs=116.9
Q ss_pred ccCccccCCeeeEEEEEeCCCcEEEEEEecccccC---------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 516 ETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK---------KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~---------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
..++||+|+||.||+|+.. +..+|+|+....... .+.|.+|++++.+++|||||++..++.. ++..++|
T Consensus 340 ~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-~~~~~lV 417 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD-LDNKRIM 417 (540)
T ss_dssp --------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-TTTTEEE
T ss_pred CCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-CCccEEE
Confidence 4578999999999999654 678999986432211 2458999999999999999977777765 3567999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.++++. +.+|+.|+++||+|||+. +|+||||||+|||+++ ++||+|||++
T Consensus 418 mE~~~ggsL~~~l~~----------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla 476 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLG 476 (540)
T ss_dssp EECCCSEEHHHHSTT----------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTC
T ss_pred EECCCCCCHHHHHHH----------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccC
Confidence 999999999999863 347999999999999998 9999999999999998 9999999999
Q ss_pred cccCCCCcce------eeeeehhhhhhh
Q 035786 667 HAQGDSHQNV------LTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~------~~~~~~~~~y~a 688 (693)
+......... ...++||++|||
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~GT~~y~A 504 (540)
T 3en9_A 477 KISNLDEDKAVDLIVFKKAVLSTHHEKF 504 (540)
T ss_dssp EECCCHHHHHHHHHHHHHHHHHHCGGGH
T ss_pred EECCCccccccchhhhhhhhcCCCCcCC
Confidence 9985432211 235678999887
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-22 Score=198.03 Aligned_cols=159 Identities=25% Similarity=0.249 Sum_probs=109.7
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
.++|++|+|++|.+++..+..|+++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..+..+++|++|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 34567777777777765555667777777777777777755555667777777777777777755555566777777777
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|.+++..+..+..+++|+.|++++|++++..+..+..+++|++|++++|.+.+. +++|+.|+++.|+++|
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g 179 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSG 179 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTT
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCc
Confidence 777777765555567777777777777777766555677777777777777766543 3466777777777777
Q ss_pred cCCCcc
Q 035786 277 QLSEGL 282 (693)
Q Consensus 277 ~i~~~~ 282 (693)
.+|..+
T Consensus 180 ~ip~~~ 185 (208)
T 2o6s_A 180 VVRNSA 185 (208)
T ss_dssp TBBCTT
T ss_pred eeeccC
Confidence 766543
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-23 Score=219.51 Aligned_cols=162 Identities=13% Similarity=0.190 Sum_probs=133.2
Q ss_pred CCCCccCccccCCeeeEEEEEeC-C-CcEEEEEEecccccCHHHHHHHHHHHhcCCCCC------ccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-G-GTTVVVKKVSLHSFKKESYMMELDLFSRVSHAR------LVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~-g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~n------iv~l~g~~~~~~~~~ 583 (693)
++|...+.||+|+||.||+|... + ++.||||.+.......+.+.+|++++.+++|++ ++.+.+++.. ....
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF-HGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE-TTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee-CCeE
Confidence 45778889999999999999863 3 478999999765444677899999999998776 8899888765 4688
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee-----------
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL----------- 652 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl----------- 652 (693)
++||||+ +|++.+++..... ..+++.++..|+.|++.||+|||+. +|+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~------~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNF------QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTT------CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECC
T ss_pred EEEEecc-CCChHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccc
Confidence 9999999 6777777765321 3589999999999999999999988 99999999999999
Q ss_pred --------CCCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 653 --------DDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 653 --------d~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+.++.+||+|||+++....... ...||+.|+|
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~----~~~gt~~y~a 207 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEHHT----TIVATRHYRP 207 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSCCC----SSCSCGGGCC
T ss_pred cccccccccCCCcEEEeecCcccccccccc----CCcCCCcccC
Confidence 6788999999999987643322 2456777765
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-22 Score=201.28 Aligned_cols=179 Identities=26% Similarity=0.248 Sum_probs=109.7
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecc
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 198 (693)
..++++++++.++ .+|..+. ++|+.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..+..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4567778777776 4555554 467777777777777666677777777777777777776666666666667777766
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccC
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
+|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l----------------- 154 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL----------------- 154 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC-----------------
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcC-----------------
Confidence 666665555556666666666666666665555455556666666666666554444344444
Q ss_pred CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcc
Q 035786 279 SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG 325 (693)
Q Consensus 279 ~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g 325 (693)
++|+.|+|++|++++..+..+..+++|+.|+|++|.+++
T Consensus 155 --------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 155 --------TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp --------TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred --------cCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 444444444444444444444445555555555555544
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-23 Score=223.23 Aligned_cols=164 Identities=17% Similarity=0.318 Sum_probs=134.7
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCC-----------CCCccceeEEEEcC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-----------HARLVPLLGQCLEH 579 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-----------H~niv~l~g~~~~~ 579 (693)
++|...+.||+|+||.||+|+. .+|+.||||++.......+.+.+|++++.+++ |+||+++++++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 3577788999999999999996 57899999999765445677899999999887 89999999998743
Q ss_pred C---CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC---
Q 035786 580 E---TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD--- 653 (693)
Q Consensus 580 ~---~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld--- 653 (693)
+ ...++||||+ +|+|.+++..... ..+++..+..|+.|++.||+|||+.+ +|+||||||+|||++
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~------~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYEH------RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTTT------SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhhc------cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 2 1578999999 8999999976432 34899999999999999999999853 799999999999994
Q ss_pred ---CCCceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 654 ---DKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 654 ---~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
.++.+||+|||+++....... ...+|+.|+|
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~t~~y~a 203 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEHYT----NSIQTREYRS 203 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBCCC----SCCSCGGGCC
T ss_pred CCcCcceEEEcccccccccCCCCC----CCCCCccccC
Confidence 455899999999988744322 2456777765
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-22 Score=210.51 Aligned_cols=192 Identities=29% Similarity=0.395 Sum_probs=111.7
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|++|++++|.++. +| .+..+++|++|+|++|.+.+..+ +..+++|++|+|++|.+++ +| .+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEE
Confidence 5556666666666553 33 35556666666666666654332 5666666666666666654 22 455566666666
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|.+++ +|. +..+++|+.|++++|++++..+ ++.+++|++|++++|.+++..+ +..+++|++|++++|.+++
T Consensus 114 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 66666654 222 5566666666666666654322 5566666666666666654332 5566666666666666654
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcc
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITG 325 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g 325 (693)
..+ +..+++|+.|++++|++++..| +..+++|+.|+|++|++++
T Consensus 188 ~~~---l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP---LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG---GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh---hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 322 3556666666666666665442 5666667777777776653
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-22 Score=209.88 Aligned_cols=197 Identities=26% Similarity=0.405 Sum_probs=162.7
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 167 (693)
....++.|+.|+++++.+.. +| .+. .+++|++|+|++|.+++..+ +.++++|++|+|++|.+++. | .+..+++
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-l~-~~~-~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~ 108 (308)
T 1h6u_A 36 TQADLDGITTLSAFGTGVTT-IE-GVQ-YLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQS 108 (308)
T ss_dssp CHHHHHTCCEEECTTSCCCC-CT-TGG-GCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTT
T ss_pred cHHHcCCcCEEEeeCCCccC-ch-hhh-ccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCC
Confidence 34567788899999888764 55 454 48999999999999986544 88999999999999998863 3 6888999
Q ss_pred CCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 035786 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK 247 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 247 (693)
|++|+|++|.+++ +|. +..+++|++|++++|.+++..+ +..+++|+.|++++|++++.. . +..+++|+.|++++
T Consensus 109 L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~-~-l~~l~~L~~L~l~~ 182 (308)
T 1h6u_A 109 IKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLT-P-LANLSKLTTLKADD 182 (308)
T ss_dssp CCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCS
T ss_pred CCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCCh-h-hcCCCCCCEEECCC
Confidence 9999999999986 443 8889999999999999986543 888999999999999998643 3 88999999999999
Q ss_pred CcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCc
Q 035786 248 NSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGA 302 (693)
Q Consensus 248 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~ 302 (693)
|.+++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+++.
T Consensus 183 n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~---l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 183 NKISDISP--LASLPNLIEVHLKNNQISDVSP---LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp SCCCCCGG--GGGCTTCCEEECTTSCCCBCGG---GTTCTTCCEEEEEEEEEECC
T ss_pred CccCcChh--hcCCCCCCEEEccCCccCcccc---ccCCCCCCEEEccCCeeecC
Confidence 99986544 8889999999999999986543 57889999999999999763
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-23 Score=236.67 Aligned_cols=167 Identities=19% Similarity=0.273 Sum_probs=135.6
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEc-----CCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLE-----HETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~-----~~~~~ 583 (693)
++|...+.||+|+||.||+|.. .+|+.||||++..... ..+.|.+|++++.+++|||||++++++.. .++..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 4688899999999999999986 4689999999865322 25679999999999999999999998643 13467
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc---eEE
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE---VRL 660 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~---~ki 660 (693)
++||||+++|+|.+++..... ...+++..+..|+.+++.||+|||+. +|+||||||+||+++.++. +||
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~-----~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL 165 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFEN-----CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKI 165 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSC-----TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEE
T ss_pred EEEEEeCCCCCHHHHHHhccc-----CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEE
Confidence 899999999999999985332 13588999999999999999999998 9999999999999997654 999
Q ss_pred CCcccccccCCCCcceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|||+++....... .+...||+.|+|
T Consensus 166 ~DFG~a~~~~~~~~--~~~~~gt~~Y~A 191 (676)
T 3qa8_A 166 IDLGYAKELDQGEL--CTEFVGTLQYLA 191 (676)
T ss_dssp CSCCCCCBTTSCCC--CCCCCSCCTTCS
T ss_pred cccccccccccccc--cccccCCcccCC
Confidence 99999998744332 233567777765
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=9e-23 Score=214.07 Aligned_cols=148 Identities=19% Similarity=0.261 Sum_probs=112.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||.||+|+.. +|+.||||++...... .+.+.++..++..++||||+++++++.+ ++..++||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~ 103 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-NTDVFIAM 103 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEE
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-CCcEEEEE
Confidence 45777889999999999999975 6899999999754332 2334455567888899999999999876 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+ ++.+..+..... ..+++..+..++.++++||+|||+.+ +|+||||||+||+++.++.+||+|||+++
T Consensus 104 e~~-~~~~~~l~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 173 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ-------GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISG 173 (318)
T ss_dssp CCC-SEEHHHHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC-
T ss_pred ecc-CCcHHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCch
Confidence 999 445554443321 35899999999999999999999721 79999999999999999999999999998
Q ss_pred ccC
Q 035786 668 AQG 670 (693)
Q Consensus 668 ~~~ 670 (693)
...
T Consensus 174 ~~~ 176 (318)
T 2dyl_A 174 RLV 176 (318)
T ss_dssp ---
T ss_pred hcc
Confidence 763
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-22 Score=226.13 Aligned_cols=158 Identities=29% Similarity=0.464 Sum_probs=97.1
Q ss_pred CCCCCCCCCC----CCcce-eecCCCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCC
Q 035786 43 DWPLRTEPCR----SWRGV-QCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRL 117 (693)
Q Consensus 43 ~W~~~~~~C~----~W~gv-~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l 117 (693)
+|..+.++|. .|.|+ .|..++++.|+|+ +|.+.+ +|..+ +
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls-------------------------------~n~L~~-lp~~l---~ 79 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLINQFSELQLN-------------------------------RLNLSS-LPDNL---P 79 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECC-------------------------------SSCCSC-CCSCC---C
T ss_pred HHhccCCccccccchhhhccccccCCccEEEeC-------------------------------CCCCCc-cCHhH---c
Confidence 5755566773 48898 6754445555444 444444 55443 3
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
++|++|+|++|.|+ .+| +.+++|++|+|++|.|++ +|. +.+ +|++|+|++|.+++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 56777777777766 455 345667777777777765 555 444 67777777777665 554 4566666777
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCch
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPL 256 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 256 (693)
++|.+++ +|. .+++|+.|+|++|++++ +|. |. ++|+.|+|++|+|+ .+|.
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh
Confidence 7666664 454 45666777777777665 555 44 66666666666666 3443
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-22 Score=234.88 Aligned_cols=262 Identities=21% Similarity=0.196 Sum_probs=134.2
Q ss_pred CHHHHHHHHHHHHhCCC----CCCCCCCCCCCCCCCcceeecCCCEeEEEcCCCCcccccccCCccCccccccCCCCCEE
Q 035786 23 SAVQRSALLDLRSSLGL----RSRDWPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSF 98 (693)
Q Consensus 23 ~~~~~~aLl~~k~~l~~----~~~~W~~~~~~C~~W~gv~C~~~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L 98 (693)
.+.++++|+++..+... ....|.....+++.|.+++++.++++.++|.+.... .. ....|+.+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~---~~----------~~~~l~~l 196 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKD---EA----------NQALLQHK 196 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCC---cc----------hhhHhhcC
Confidence 45678999999987731 224565444556689999998888998888653311 11 11223444
Q ss_pred EccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCC
Q 035786 99 NASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLL 178 (693)
Q Consensus 99 ~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 178 (693)
+|+.+.+ ..++++.|.+. ..|..|..++.|+.|+|++|.+. .+|..+.++++|++|+|++|.|
T Consensus 197 ~Ls~~~i---------------~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l 259 (727)
T 4b8c_D 197 KLSQYSI---------------DEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSL 259 (727)
T ss_dssp -----------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCC
T ss_pred ccCcccc---------------cCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcC
Confidence 4444332 23455556555 56778889999999999999988 6777777899999999999999
Q ss_pred CCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhh
Q 035786 179 TGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLEL 258 (693)
Q Consensus 179 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 258 (693)
+ .+|..|..+++|++|+|++|.|+ .+|..++.+++|++|+|++|.++ .+|..|+++++|++|+|++|.|++.+|..+
T Consensus 260 ~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 260 T-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp S-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred c-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 8 88999999999999999999998 78999999999999999999997 778889999999999999999999999888
Q ss_pred hcCcc-ccccccccccccccCCCcccCCCCCCCEEEccCC--------cCCCcCcccccCCCCCCEEEccCCcCc
Q 035786 259 RGLRN-LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGN--------KLDGALPATLFLRPNLRFLDLSRNNIT 324 (693)
Q Consensus 259 ~~l~~-L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N--------~l~g~~p~~l~~~~~L~~L~Ls~N~l~ 324 (693)
..+.. +..|+|++|.++|.+|. .|..|+++.| .+.+..+..+..+..+....+++|-+.
T Consensus 337 ~~~~~~~~~l~l~~N~l~~~~p~-------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 337 TEKSVTGLIFYLRDNRPEIPLPH-------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp HHHHHHHHHHHHHHCCCCCCCCC-------C-----------------------------------------CCC
T ss_pred hhcchhhhHHhhccCcccCcCcc-------ccceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 66533 33578999999887765 3556677766 233333333334444455555555554
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.5e-21 Score=190.49 Aligned_cols=181 Identities=22% Similarity=0.200 Sum_probs=145.3
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 200 (693)
+.++.+++.++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..+..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45677777776 345444 458899999999998777777888999999999999998766667788899999999999
Q ss_pred cCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCC
Q 035786 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSE 280 (693)
Q Consensus 201 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~ 280 (693)
.+++..+..+..+++|++|++++|++++..+..|.++++|++|++++|++++..+..+..+++|++|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 9887666667888999999999999987777778888899999999998887777678888888888888887653
Q ss_pred cccCCCCCCCEEEccCCcCCCcCcccccCCCC
Q 035786 281 GLFPTLDQLQVVDLSGNKLDGALPATLFLRPN 312 (693)
Q Consensus 281 ~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~ 312 (693)
.+++|+.|+++.|+++|.+|.+++.++.
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3456788888888888888887765543
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-21 Score=217.61 Aligned_cols=182 Identities=24% Similarity=0.364 Sum_probs=147.7
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecc
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 198 (693)
+|+.|+|++|.+++ +|..+. ++|++|+|++|.|+ .+| ..+++|++|+|++|.+++ +|. +.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999987 777663 78999999999998 667 457889999999999987 777 554 89999999
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccC
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
+|.+++ +|. .+++|+.|+|++|++++ +|. .+++|++|+|++|++++ +|. +. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 999987 666 67889999999999986 665 57889999999999987 666 65 88999999999888 66
Q ss_pred CCcccCCCCCC-------CEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCc
Q 035786 279 SEGLFPTLDQL-------QVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPI 329 (693)
Q Consensus 279 ~~~~~~~l~~L-------~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~ 329 (693)
|. + .. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|.
T Consensus 196 p~-~-~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 196 PA-V-PV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp CC-C-C----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred hh-H-HH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 66 3 33 56 88888888888 4777777788888888888888887774
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.3e-21 Score=203.92 Aligned_cols=228 Identities=18% Similarity=0.116 Sum_probs=147.9
Q ss_pred cCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCcc-ccCCCCCCCE-EEccCCCCCCcCchh
Q 035786 108 SIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPA-TLGELKKLSN-LDLSRNLLTGEIPNA 185 (693)
Q Consensus 108 ~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~-L~Ls~N~l~~~~p~~ 185 (693)
.||..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++|++ ++++.|+++...|..
T Consensus 23 ~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~ 99 (350)
T 4ay9_X 23 EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEA 99 (350)
T ss_dssp SCCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTS
T ss_pred ccCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchh
Confidence 455543 35688888888888865556788888888888888887666554 5777877665 556678887766777
Q ss_pred hhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccC-CcccccCCccccCCC-CCCEEEccCCcCcccCchhhhcCcc
Q 035786 186 ISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD-NALTGFIPSEVGNLD-KLIELDLSKNSISGSLPLELRGLRN 263 (693)
Q Consensus 186 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~ 263 (693)
|..+++|++|++++|.+++..+..+....++..|++.+ |++....+..|..+. .++.|++++|+++.. |.......+
T Consensus 100 f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~ 178 (350)
T 4ay9_X 100 FQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQ 178 (350)
T ss_dssp BCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEE
T ss_pred hhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC-Chhhccccc
Confidence 88888888888888888766555666666777777755 456555555566654 577788888888743 333334567
Q ss_pred ccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEc
Q 035786 264 LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNI 343 (693)
Q Consensus 264 L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~l 343 (693)
|++|++++|+..+.+|...|..+++|+.|++++|+|+...+.. +.+|+.|.+.+++--..+|. ...+.+|+.+++
T Consensus 179 L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~---~~~L~~L~~l~~~~l~~lP~--l~~l~~L~~l~l 253 (350)
T 4ay9_X 179 LDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG---LENLKKLRARSTYNLKKLPT--LEKLVALMEASL 253 (350)
T ss_dssp EEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---CTTCCEEECTTCTTCCCCCC--TTTCCSCCEEEC
T ss_pred hhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---hccchHhhhccCCCcCcCCC--chhCcChhhCcC
Confidence 7777776544444677766777777777777777777543333 34455555444432234442 233334444444
Q ss_pred c
Q 035786 344 S 344 (693)
Q Consensus 344 s 344 (693)
+
T Consensus 254 ~ 254 (350)
T 4ay9_X 254 T 254 (350)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-21 Score=200.37 Aligned_cols=141 Identities=13% Similarity=0.102 Sum_probs=113.2
Q ss_pred HHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc-------------------CHHHHHHHHHHHhcCCC
Q 035786 506 QLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF-------------------KKESYMMELDLFSRVSH 566 (693)
Q Consensus 506 ~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~-------------------~~~~f~~Ei~~l~~l~H 566 (693)
.+......|...+.||+|+||.||+|+..+|+.||||.+..... ..+.|.+|++++.+++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34444445666789999999999999997799999999864321 1346899999999999
Q ss_pred CCccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCC
Q 035786 567 ARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQ 646 (693)
Q Consensus 567 ~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk 646 (693)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.+++.||+|||.. +|+|||||
T Consensus 163 -~-~~v~~~~~~--~~~~lvmE~~~g~~L~~-l~~--------------~~~~~i~~qi~~~l~~lH~~---giiHrDlk 220 (282)
T 1zar_A 163 -G-LAVPKVYAW--EGNAVLMELIDAKELYR-VRV--------------ENPDEVLDMILEEVAKFYHR---GIVHGDLS 220 (282)
T ss_dssp -T-SSSCCEEEE--ETTEEEEECCCCEEGGG-CCC--------------SCHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred -C-CCcCeEEec--cceEEEEEecCCCcHHH-cch--------------hhHHHHHHHHHHHHHHHHHC---CCEeCCCC
Confidence 4 666664432 45699999999999998 421 11346999999999999988 99999999
Q ss_pred CCCeeeCCCCceEECCcccccccC
Q 035786 647 ASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 647 ~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
|+|||++ ++.+||+|||+++...
T Consensus 221 p~NILl~-~~~vkl~DFG~a~~~~ 243 (282)
T 1zar_A 221 QYNVLVS-EEGIWIIDFPQSVEVG 243 (282)
T ss_dssp TTSEEEE-TTEEEECCCTTCEETT
T ss_pred HHHEEEE-CCcEEEEECCCCeECC
Confidence 9999999 9999999999998753
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=200.69 Aligned_cols=242 Identities=18% Similarity=0.179 Sum_probs=192.5
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCch-hhhcCcCCCe-eecc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPN-AISLLGNLTR-LNLA 198 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~-L~Ls 198 (693)
+.++.++++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++|.. +.+.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56788889988 678766 36899999999999976667899999999999999999877764 6788888775 6677
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC-CcCcccCchhhhcCc-cccccccccccccc
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK-NSISGSLPLELRGLR-NLAKLVISENGLEG 276 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g 276 (693)
.|+++...|..|..+++|++|++++|++++..+..+....++..|++.+ |++....+..|..+. .++.|+|++|+++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~- 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ- 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-
Confidence 8999988888999999999999999999987777777788888999976 567766666777765 5889999999998
Q ss_pred cCCCcccCCCCCCCEEEccC-CcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC-
Q 035786 277 QLSEGLFPTLDQLQVVDLSG-NKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS- 354 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~-N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~- 354 (693)
.++...|. ..+|+.+++++ |.++...+..|..+++|++|||++|+|+ .+|.. .+..|+.|.+.++.--..+|.
T Consensus 168 ~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~---~~~~L~~L~~l~~~~l~~lP~l 242 (350)
T 4ay9_X 168 EIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSY---GLENLKKLRARSTYNLKKLPTL 242 (350)
T ss_dssp EECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSS---SCTTCCEEECTTCTTCCCCCCT
T ss_pred CCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChh---hhccchHhhhccCCCcCcCCCc
Confidence 56766654 46899999975 6666554556788999999999999998 56643 355677777665544445665
Q ss_pred CCCCCCCEEEccCCcce
Q 035786 355 SSFRKFSLIDLSSNYFQ 371 (693)
Q Consensus 355 ~~~~~l~~ldLs~N~l~ 371 (693)
..+++|+.++++++...
T Consensus 243 ~~l~~L~~l~l~~~~~c 259 (350)
T 4ay9_X 243 EKLVALMEASLTYPSHC 259 (350)
T ss_dssp TTCCSCCEEECSCHHHH
T ss_pred hhCcChhhCcCCCCccc
Confidence 67889999999876644
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-21 Score=214.17 Aligned_cols=156 Identities=18% Similarity=0.184 Sum_probs=115.3
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHHHHHHHhcCCC-CCc----------cceeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMMELDLFSRVSH-ARL----------VPLLGQ 575 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H-~ni----------v~l~g~ 575 (693)
..|...++||+|+||.||+|+. .+|+.||||++..... ..+.|.+|+.++..++| +|. +.+...
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 3466778999999999999995 5799999999873222 24679999999999988 322 111111
Q ss_pred -----------EEcC----CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCe
Q 035786 576 -----------CLEH----ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPL 640 (693)
Q Consensus 576 -----------~~~~----~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~i 640 (693)
+... ....+++|+++ +|+|.++++..... ......++|..++.|+.|+++||+|||+. +|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~-~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSH-SSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHH-TTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcc-cccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 1100 11245666655 68999998521100 00124588999999999999999999998 99
Q ss_pred EecCCCCCCeeeCCCCceEECCcccccccCCC
Q 035786 641 VHRDVQASSILLDDKFEVRLGSLSELHAQGDS 672 (693)
Q Consensus 641 iHrDlk~~NILld~~~~~ki~Dfgla~~~~~~ 672 (693)
|||||||+|||++.++.+||+|||+++..+..
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~ 264 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS 264 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc
Confidence 99999999999999999999999999886443
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-22 Score=232.68 Aligned_cols=281 Identities=10% Similarity=0.065 Sum_probs=130.6
Q ss_pred cCCCCCEEEccCCCCCCc----CchHhhhCCCCccEEEecCCCCC----cCCCcccCCCccCCEEecccCcCCccCcccc
Q 035786 91 NLTLLSSFNASGLSLPGS----IPEWFGYRLPALQVLDLRSCSLS----GSIPGSFGNLSRLNVLYLSGNSLAGNVPATL 162 (693)
Q Consensus 91 ~L~~L~~L~ls~~~l~g~----ip~~~~~~l~~L~~L~Ls~n~l~----g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 162 (693)
++++|+.|++++|.+.+. ++..+. .+++|++|+|++|.++ +.++..+.++++|++|+|++|.+.+ +|..+
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~-~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~ 239 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQ-HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFF 239 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHH-HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHh-cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHH
Confidence 445556666665554433 222222 2555666666655554 2233334455556666666555543 33344
Q ss_pred CCCCCCCEEEccCCCC--------------------------CCcCchhhhcCcCCCeeecccccCCCcCc-ccccCCCC
Q 035786 163 GELKKLSNLDLSRNLL--------------------------TGEIPNAISLLGNLTRLNLASNFFTGQIP-SGLYSLSS 215 (693)
Q Consensus 163 ~~l~~L~~L~Ls~N~l--------------------------~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~ 215 (693)
.++++|++|+++.+.. .+.+|..+..+++|++|+|++|.+++... ..+..+++
T Consensus 240 ~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~ 319 (592)
T 3ogk_B 240 KAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPN 319 (592)
T ss_dssp HHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTT
T ss_pred hhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcC
Confidence 4444444444432111 12233334444445555555444432221 22344444
Q ss_pred CCEEEccCCcccccCCccccCCCCCCEEEcc-----------CCcCccc-CchhhhcCccccccccccccccccCCCccc
Q 035786 216 IQFLNLSDNALTGFIPSEVGNLDKLIELDLS-----------KNSISGS-LPLELRGLRNLAKLVISENGLEGQLSEGLF 283 (693)
Q Consensus 216 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls-----------~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~ 283 (693)
|+.|+++++...+.++..+..+++|++|+++ .|.+++. ++.....+++|++|+++.|.+++..+..+.
T Consensus 320 L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~ 399 (592)
T 3ogk_B 320 LEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIG 399 (592)
T ss_dssp CCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHH
T ss_pred CCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHH
Confidence 4444444221111222222344555555555 2344332 122233455555555555555544333322
Q ss_pred CCCCCCCEEEcc----CCcCCCc-----CcccccCCCCCCEEEccCC--cCcccCCccCcCCCCCCcEEEccCCcccee-
Q 035786 284 PTLDQLQVVDLS----GNKLDGA-----LPATLFLRPNLRFLDLSRN--NITGSWPILSTNGNASGAVFNISNNMLYGD- 351 (693)
Q Consensus 284 ~~l~~L~~L~Ls----~N~l~g~-----~p~~l~~~~~L~~L~Ls~N--~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~- 351 (693)
..+++|+.|+++ .|.+++. ++..+..+++|+.|++++| .+++..+......+++|+.|++++|.+++.
T Consensus 400 ~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 479 (592)
T 3ogk_B 400 TYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEG 479 (592)
T ss_dssp HHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHH
T ss_pred hhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHH
Confidence 235556666664 4555542 2333444566666666532 244433322223355677777777766542
Q ss_pred cCC--CCCCCCCEEEccCCcceee
Q 035786 352 LNS--SSFRKFSLIDLSSNYFQGT 373 (693)
Q Consensus 352 ~~~--~~~~~l~~ldLs~N~l~g~ 373 (693)
++. ..+++|+.||+++|.|++.
T Consensus 480 ~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 480 LMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHhcCcccCeeeccCCCCcHH
Confidence 221 3456677777777776544
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.1e-20 Score=184.10 Aligned_cols=137 Identities=27% Similarity=0.337 Sum_probs=110.7
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
++|++|+|++|.+++..|..|.++++|++|+|++|++.+..+..|..+++|++|+|++|.+++..+..+..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 67788888888888877888888888888888888887665666788888888888888888766666778888888888
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 255 (693)
++|.++ .+|..+..+++|+.|+|++|++++..+..|..+++|+.|++++|.+++..+
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 888887 677778888888888888888887766778888888888888888876543
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=178.79 Aligned_cols=155 Identities=24% Similarity=0.265 Sum_probs=121.3
Q ss_pred EEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCC-cccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccC
Q 035786 97 SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIP-GSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175 (693)
Q Consensus 97 ~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 175 (693)
.+++++|.+. .+|..+ .+.+++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 15 ~l~~s~n~l~-~iP~~~---~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHI---PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCccCC---CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 3445555544 356543 3456788888888887755 4578888888888888888877777888888888888888
Q ss_pred CCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCc
Q 035786 176 NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255 (693)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 255 (693)
|.+++..|..|..+++|++|+|++|.+++..|..+..+++|+.|+|++|++++..|..|..+++|++|++++|.+++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88887777778888888888888888888778888888888888888888888778888888888888888888876544
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=194.21 Aligned_cols=174 Identities=28% Similarity=0.259 Sum_probs=134.9
Q ss_pred EEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccC-CCccCCEEecccCcCCccCccccCCCCCCCEEEccCC
Q 035786 98 FNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFG-NLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRN 176 (693)
Q Consensus 98 L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 176 (693)
++++++.+. .+|..+ .+.++.|+|++|.|++..+..|. ++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 23 l~c~~~~l~-~iP~~~---~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 23 LSCSKQQLP-NVPQSL---PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EECCSSCCS-SCCSSC---CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEeCCCCcC-ccCccC---CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 334444443 355443 34578899999998887777787 8889999999999998877788888999999999999
Q ss_pred CCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccc---cCCCCCCEEEccCCcCccc
Q 035786 177 LLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEV---GNLDKLIELDLSKNSISGS 253 (693)
Q Consensus 177 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~---~~l~~L~~L~Ls~N~l~g~ 253 (693)
++++..+..|..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++..+..| ..+++|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 9887777778888899999999998888778888888999999999998886444444 5688889999999998877
Q ss_pred CchhhhcCccc--ccccccccccc
Q 035786 254 LPLELRGLRNL--AKLVISENGLE 275 (693)
Q Consensus 254 ~p~~~~~l~~L--~~L~Ls~N~l~ 275 (693)
.+..+..++.+ +.|+|++|.+.
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CHHHhhhccHhhcceEEecCCCcc
Confidence 66777777763 66777777664
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.80 E-value=6.7e-22 Score=225.85 Aligned_cols=281 Identities=13% Similarity=0.075 Sum_probs=203.2
Q ss_pred ccCCCCCEEEccCCCCC----CcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCc-----------------------
Q 035786 90 GNLTLLSSFNASGLSLP----GSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLS----------------------- 142 (693)
Q Consensus 90 ~~L~~L~~L~ls~~~l~----g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~----------------------- 142 (693)
.+++.|+.|+++.|.+. +.++..+. .+++|++|+|++|.+.+ +|..+.+++
T Consensus 189 ~~~~~L~~L~L~~n~~~~~~~~~l~~~~~-~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l 266 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFAKISPKDLETIAR-NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNL 266 (592)
T ss_dssp HHCCCCCEEECTTCCCSSCCHHHHHHHHH-HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCC
T ss_pred hcCCCccEEEeeccCCCccCHHHHHHHHh-hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHh
Confidence 45678888888888876 34444444 37888888888877654 344444444
Q ss_pred ----cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCc-hhhhcCcCCCeeecccccCCCcCcccccCCCCCC
Q 035786 143 ----RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIP-NAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQ 217 (693)
Q Consensus 143 ----~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 217 (693)
+|+.|+++++. .+.+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++++...+.++.....+++|+
T Consensus 267 ~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~ 345 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLK 345 (592)
T ss_dssp CCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCC
T ss_pred hccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCC
Confidence 44555444432 34567778889999999999999876543 4468899999999994433344555557789999
Q ss_pred EEEccC-----------Cccccc-CCccccCCCCCCEEEccCCcCcccCchhhhc-Cccccccccc----cccccccCCC
Q 035786 218 FLNLSD-----------NALTGF-IPSEVGNLDKLIELDLSKNSISGSLPLELRG-LRNLAKLVIS----ENGLEGQLSE 280 (693)
Q Consensus 218 ~L~Ls~-----------N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~Ls----~N~l~g~i~~ 280 (693)
.|++++ |.+++. ++..+..+++|++|+++.|.+++..+..+.. +++|++|+++ .|.+++...+
T Consensus 346 ~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~ 425 (592)
T 3ogk_B 346 RLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLD 425 (592)
T ss_dssp EEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCH
T ss_pred EEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHH
Confidence 999993 666643 2223456899999999999999888877776 9999999996 6777753111
Q ss_pred ----cccCCCCCCCEEEccCC--cCCCcCcccccC-CCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCcccee-c
Q 035786 281 ----GLFPTLDQLQVVDLSGN--KLDGALPATLFL-RPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGD-L 352 (693)
Q Consensus 281 ----~~~~~l~~L~~L~Ls~N--~l~g~~p~~l~~-~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~-~ 352 (693)
.++..+++|+.|++++| .+++..+..+.. +++|+.|+|++|++++.........+++|+.|++++|.+++. +
T Consensus 426 ~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 505 (592)
T 3ogk_B 426 NGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAI 505 (592)
T ss_dssp HHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHH
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHH
Confidence 12456889999999854 477665555543 789999999999998733223446778999999999998654 2
Q ss_pred CC--CCCCCCCEEEccCCcceee
Q 035786 353 NS--SSFRKFSLIDLSSNYFQGT 373 (693)
Q Consensus 353 ~~--~~~~~l~~ldLs~N~l~g~ 373 (693)
+. ..+++|+.|+|++|++++.
T Consensus 506 ~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 506 AAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHhcCccCeeECcCCcCCHH
Confidence 22 3578999999999998765
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=205.52 Aligned_cols=185 Identities=27% Similarity=0.400 Sum_probs=95.8
Q ss_pred EEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCC
Q 035786 98 FNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL 177 (693)
Q Consensus 98 L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 177 (693)
+++..+.+...++. . .|++|+.|+|++|.+.. +| .|..+++|+.|+|++|.+.+..| +..+++|++|+|++|.
T Consensus 26 l~l~~~~i~~~~~~--~-~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 98 (605)
T 1m9s_A 26 DNLKKKSVTDAVTQ--N-ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENK 98 (605)
T ss_dssp HHTTCSCTTSEECH--H-HHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred HhccCCCcccccch--h-cCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCC
Confidence 34444444443332 1 25666666666666653 22 35566666666666666654433 5566666666666666
Q ss_pred CCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchh
Q 035786 178 LTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLE 257 (693)
Q Consensus 178 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 257 (693)
+++ +| .+..+++|+.|+|++|.+++ + +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++..|
T Consensus 99 l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-- 170 (605)
T 1m9s_A 99 IKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 170 (605)
T ss_dssp CCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--
T ss_pred CCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--
Confidence 653 22 45555555555555555553 2 2355555555555555555543 345555555555555555554433
Q ss_pred hhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCC
Q 035786 258 LRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLD 300 (693)
Q Consensus 258 ~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~ 300 (693)
+..+++|+.|+|++|.+++. + .+..+++|+.|+|++|.++
T Consensus 171 l~~l~~L~~L~Ls~N~i~~l-~--~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 171 LAGLTKLQNLYLSKNHISDL-R--ALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp GTTCTTCCEEECCSSCCCBC-G--GGTTCTTCSEEECCSEEEE
T ss_pred hccCCCCCEEECcCCCCCCC-h--HHccCCCCCEEEccCCcCc
Confidence 44455555555555544432 1 1244444444444444444
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-19 Score=176.96 Aligned_cols=154 Identities=21% Similarity=0.201 Sum_probs=117.2
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCc-cccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVP-ATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 199 (693)
+.+++++|.++. +|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 478888888874 566553 346788888888887654 3577888888888888888877677788888888888888
Q ss_pred ccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccccc
Q 035786 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQ 277 (693)
Q Consensus 200 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 277 (693)
|.+++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|.+.+.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 888777777777888888888888888877777788888888888888888777777777777777777777766543
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.80 E-value=4.7e-19 Score=175.90 Aligned_cols=153 Identities=22% Similarity=0.274 Sum_probs=101.0
Q ss_pred CEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccC
Q 035786 96 SSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175 (693)
Q Consensus 96 ~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 175 (693)
+.++++++.+. .+|..+ .++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l---~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNL---PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSC---CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCcc---CcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 45666666654 455543 25677777777777766666677777777777777777766667777777777777777
Q ss_pred CCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc
Q 035786 176 NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252 (693)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 252 (693)
|.++...+..|..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++|.+..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 77765444455666667777777776666666666666666666666666666655566666666666666666653
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.9e-19 Score=184.34 Aligned_cols=169 Identities=28% Similarity=0.377 Sum_probs=85.3
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|++|++++|.+... | .+..+++|++|+|++|++++..| +.++++|++|+|++|.+++ +| .+..+++|++|+
T Consensus 45 l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 55666666666665533 2 25555666666666666654333 5555666666666665553 22 245555555555
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|.+++. +.+..+++|+.|++++|++++. ..++.+++|++|++++|++++..| +
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l------------------ 174 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--L------------------ 174 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G------------------
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--h------------------
Confidence 555555432 2344444555555555544432 234444444444444444443222 3
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCc
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~ 324 (693)
..+++|+.|++++|++++. | .+..+++|+.|++++|+++
T Consensus 175 -------~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 175 -------AGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp -------TTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred -------cCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 4445555555555555432 2 2455555555555555554
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-19 Score=192.30 Aligned_cols=176 Identities=28% Similarity=0.254 Sum_probs=96.7
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccC-CCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG-ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 199 (693)
+.++++++.++. +|..+. ..++.|+|++|++++..+..+. ++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 456666666653 454443 2466666666666655555555 666666666666666655555555566666666666
Q ss_pred ccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCC
Q 035786 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLS 279 (693)
Q Consensus 200 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~ 279 (693)
|.+++..+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++ +|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-------------------------l~ 152 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-------------------------FP 152 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-------------------------CC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-------------------------eC
Confidence 65554444445555555555555555555555555555555555555555543 22
Q ss_pred Cccc---CCCCCCCEEEccCCcCCCcCcccccCCCC--CCEEEccCCcCc
Q 035786 280 EGLF---PTLDQLQVVDLSGNKLDGALPATLFLRPN--LRFLDLSRNNIT 324 (693)
Q Consensus 280 ~~~~---~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~--L~~L~Ls~N~l~ 324 (693)
...| ..+++|+.|+|++|+|++..+..+..++. ++.|+|++|.+.
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 2222 33556666666666666544444444443 245555555544
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.79 E-value=7.8e-19 Score=182.08 Aligned_cols=174 Identities=30% Similarity=0.408 Sum_probs=149.6
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 167 (693)
.+..++.|+.|++++|.+.. +|. +. .+++|++|+|++|.+++..| +.++++|++|+|++|.+++ +| .+..+++
T Consensus 41 ~~~~l~~L~~L~l~~~~i~~-~~~-~~-~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~ 113 (291)
T 1h6t_A 41 TQNELNSIDQIIANNSDIKS-VQG-IQ-YLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKK 113 (291)
T ss_dssp CHHHHHTCCEEECTTSCCCC-CTT-GG-GCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTT
T ss_pred chhhcCcccEEEccCCCccc-Chh-Hh-cCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCC
Confidence 35577889999999998864 443 55 49999999999999997654 9999999999999999986 34 4999999
Q ss_pred CCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 035786 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK 247 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 247 (693)
|++|+|++|.+++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..| +..+++|+.|++++
T Consensus 114 L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~ 187 (291)
T 1h6t_A 114 LKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSK 187 (291)
T ss_dssp CCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCC
Confidence 99999999999864 5688999999999999999865 578999999999999999997654 89999999999999
Q ss_pred CcCcccCchhhhcCccccccccccccccc
Q 035786 248 NSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 248 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
|.+++. | .+..+++|+.|++++|.++.
T Consensus 188 N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 188 NHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp SCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 999864 4 48888889999999988874
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.79 E-value=9.5e-19 Score=173.67 Aligned_cols=152 Identities=25% Similarity=0.302 Sum_probs=97.2
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 200 (693)
+.++++++.++ .+|..+. ++|+.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666665 3454443 46666666666666555556666666666666666666666666666666666666666
Q ss_pred cCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc
Q 035786 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 201 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
.+++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666444444566666666666666666666666666666666666666666666656666666666666666664
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-19 Score=206.43 Aligned_cols=174 Identities=30% Similarity=0.411 Sum_probs=138.9
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 167 (693)
.+..|+.|+.|++++|.+.. +| .+. .+++|+.|+|++|.+++..| +.++++|+.|+|++|.+.+ +| .+..+++
T Consensus 38 ~~~~L~~L~~L~l~~n~i~~-l~-~l~-~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~ 110 (605)
T 1m9s_A 38 TQNELNSIDQIIANNSDIKS-VQ-GIQ-YLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKK 110 (605)
T ss_dssp CHHHHTTCCCCBCTTCCCCC-CT-TGG-GCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTT
T ss_pred chhcCCCCCEEECcCCCCCC-Ch-HHc-cCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCC
Confidence 45677888888888888764 44 354 38888888888888887554 8888888888888888875 33 6888888
Q ss_pred CCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 035786 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK 247 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 247 (693)
|++|+|++|.+++ + ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++++..| +..+++|+.|+|++
T Consensus 111 L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 184 (605)
T 1m9s_A 111 LKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSK 184 (605)
T ss_dssp CCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred CCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcC
Confidence 8888888888885 3 4578888888888888888865 567888888888888888887655 88888888888888
Q ss_pred CcCcccCchhhhcCccccccccccccccc
Q 035786 248 NSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 248 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
|++++. ..+..+++|+.|+|++|.+.+
T Consensus 185 N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 185 NHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp SCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 888864 358888888888888888875
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-19 Score=184.41 Aligned_cols=139 Identities=16% Similarity=0.131 Sum_probs=105.7
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcE--EEEEEecccccC-------------------------HHHHHHHHHHHhcCC
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTT--VVVKKVSLHSFK-------------------------KESYMMELDLFSRVS 565 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~--vavK~l~~~~~~-------------------------~~~f~~Ei~~l~~l~ 565 (693)
+...+.||+|+||.||+|.. .+|+. ||||.+...... ...+.+|++.+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 34567899999999999998 78989 999986432111 136889999999999
Q ss_pred CCCccceeEEEEcCCCeeEEEEccCC-CC----ChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhc-cCCCCC
Q 035786 566 HARLVPLLGQCLEHETEKLLVYKYMV-CG----DLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLH-HECNPP 639 (693)
Q Consensus 566 H~niv~l~g~~~~~~~~~~lv~ey~~-~G----sL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH-~~~~p~ 639 (693)
|+++.....+.. ...+|||||+. +| +|.++... .++.....++.+++.||.||| .. +
T Consensus 129 ~~~i~~p~~~~~---~~~~lVmE~~g~~g~~~~~L~~~~~~-----------~~~~~~~~i~~qi~~~l~~lH~~~---g 191 (258)
T 1zth_A 129 EAGVSVPQPYTY---MKNVLLMEFIGEDELPAPTLVELGRE-----------LKELDVEGIFNDVVENVKRLYQEA---E 191 (258)
T ss_dssp HTTCCCCCEEEE---ETTEEEEECCEETTEECCBHHHHGGG-----------GGGSCHHHHHHHHHHHHHHHHHTS---C
T ss_pred hCCCCCCeEEEc---CCCEEEEEecCCCCCccccHHHHhhc-----------cChHHHHHHHHHHHHHHHHHHHHC---C
Confidence 987533222222 24689999995 35 55554321 223456789999999999999 77 9
Q ss_pred eEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 640 LVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 640 iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
||||||||+|||+++ .++|+|||+|.....
T Consensus 192 ivHrDlkp~NILl~~--~~~liDFG~a~~~~~ 221 (258)
T 1zth_A 192 LVHADLSEYNIMYID--KVYFIDMGQAVTLRH 221 (258)
T ss_dssp EECSSCSTTSEEESS--SEEECCCTTCEETTS
T ss_pred EEeCCCCHHHEEEcC--cEEEEECcccccCCC
Confidence 999999999999998 999999999988643
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-18 Score=172.26 Aligned_cols=153 Identities=27% Similarity=0.327 Sum_probs=82.2
Q ss_pred EEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccccc
Q 035786 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201 (693)
Q Consensus 122 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 201 (693)
.++.+++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..+..+++|++|+|++|.
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 4555555554 3444332 556666666666666556666666666666666666654433444555555555555555
Q ss_pred CCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCc
Q 035786 202 FTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEG 281 (693)
Q Consensus 202 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~ 281 (693)
+++..+..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|++++..+ .
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~-------------------------~ 153 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPH-------------------------G 153 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCT-------------------------T
T ss_pred CCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCH-------------------------H
Confidence 55444444455555555555555554 344444455555555555555443333 3
Q ss_pred ccCCCCCCCEEEccCCcCCCcC
Q 035786 282 LFPTLDQLQVVDLSGNKLDGAL 303 (693)
Q Consensus 282 ~~~~l~~L~~L~Ls~N~l~g~~ 303 (693)
.|..+++|+.|++++|.+++..
T Consensus 154 ~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTTTCTTCCEEECTTSCBCTTB
T ss_pred HHhCCCCCCEEEeeCCCccCCc
Confidence 3455556666666666665543
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-18 Score=169.41 Aligned_cols=151 Identities=15% Similarity=0.205 Sum_probs=66.5
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|.+++..|..+..+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 444555555555554 333 3444555555555555332 122344445555555555544444444444444444444
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGL 274 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 274 (693)
+++|.+++..|..+..+++|+.|++++|.+.+.+| .+..+++|++|++++|.+++. + .+..+++|++|++++|++
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 44444444444444444444444444444112222 344444444444444444431 1 333444444444444433
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.76 E-value=3e-18 Score=166.98 Aligned_cols=155 Identities=18% Similarity=0.245 Sum_probs=134.7
Q ss_pred ccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCC
Q 035786 90 GNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLS 169 (693)
Q Consensus 90 ~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 169 (693)
..++.|+.|++++|.+. .+| .+. .+++|++|++++|.++ .++.+.++++|++|+|++|.+++..|..+..+++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~-~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIE-YAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGG-GCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhcCCccEEeccCCCcc-ChH-HHh-cCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 56788999999999988 677 465 4999999999999765 345799999999999999999988899999999999
Q ss_pred EEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCc
Q 035786 170 NLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNS 249 (693)
Q Consensus 170 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 249 (693)
+|+|++|.+++..|..+..+++|++|++++|.+.+.+| .+..+++|+.|++++|++++ ++ .+..+++|++|++++|+
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 99999999999889999999999999999998444666 68999999999999999986 44 78999999999999999
Q ss_pred Ccc
Q 035786 250 ISG 252 (693)
Q Consensus 250 l~g 252 (693)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 864
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.9e-20 Score=212.09 Aligned_cols=163 Identities=28% Similarity=0.318 Sum_probs=111.1
Q ss_pred ecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCccc
Q 035786 148 YLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT 227 (693)
Q Consensus 148 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 227 (693)
+++.|.+. ..|+.+..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.++ .+|..|+.+++|++|+|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 34445554 55778888999999999999988 77888888899999999999988 78888888999999999999988
Q ss_pred ccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccc
Q 035786 228 GFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATL 307 (693)
Q Consensus 228 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l 307 (693)
.+|..|+++++|++|+|++|.|+ .+|..|+++++|++|+|++|.|++.+|..+......+..++|++|.++|.+|.
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~-- 359 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH-- 359 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc--
Confidence 67888888888999999988886 67777888888888888888888776654321111223467788888777765
Q ss_pred cCCCCCCEEEccCC
Q 035786 308 FLRPNLRFLDLSRN 321 (693)
Q Consensus 308 ~~~~~L~~L~Ls~N 321 (693)
.|+.|+++.|
T Consensus 360 ----~l~~l~l~~n 369 (727)
T 4b8c_D 360 ----ERRFIEINTD 369 (727)
T ss_dssp ----C---------
T ss_pred ----ccceeEeecc
Confidence 3455666666
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=9.8e-21 Score=214.07 Aligned_cols=122 Identities=23% Similarity=0.284 Sum_probs=70.5
Q ss_pred CCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccc
Q 035786 191 NLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVIS 270 (693)
Q Consensus 191 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 270 (693)
.|+.|+|++|.+++ +|. ++.+++|+.|+|++|+++ .+|..++++++|+.|+|++|++++ +| .++++++|++|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 35566666666654 444 566666666666666665 455566666666666666666664 44 56666666666666
Q ss_pred cccccccC-CCcccCCCCCCCEEEccCCcCCCcCccc---ccCCCCCCEEEc
Q 035786 271 ENGLEGQL-SEGLFPTLDQLQVVDLSGNKLDGALPAT---LFLRPNLRFLDL 318 (693)
Q Consensus 271 ~N~l~g~i-~~~~~~~l~~L~~L~Ls~N~l~g~~p~~---l~~~~~L~~L~L 318 (693)
+|++++.+ |.. +..+++|+.|+|++|.+++.+|.. +..+++|+.|++
T Consensus 517 ~N~l~~~~~p~~-l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQP-LVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGG-GGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHH-HhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 66665543 333 355666666666666666554421 223567777654
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-20 Score=211.51 Aligned_cols=176 Identities=23% Similarity=0.260 Sum_probs=126.3
Q ss_pred CCccCCEEecccCcCCccCccccCCCCCCCEEEccCCC-------------CCCcCchhhhcCcCCCeee-cccc-----
Q 035786 140 NLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL-------------LTGEIPNAISLLGNLTRLN-LASN----- 200 (693)
Q Consensus 140 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N----- 200 (693)
.+++|+.|+|++|.++ .+|++++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L 425 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDL 425 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchh
Confidence 3445555555555553 445555555555555554443 4555666666666666666 4444
Q ss_pred --------cCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccc
Q 035786 201 --------FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISEN 272 (693)
Q Consensus 201 --------~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 272 (693)
.++. +|. ..|+.|+|++|++++ +|. ++.+++|+.|+|++|.++ .+|..++++++|+.|+|++|
T Consensus 426 ~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N 496 (567)
T 1dce_A 426 RSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDN 496 (567)
T ss_dssp HHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSS
T ss_pred hhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCC
Confidence 3332 121 258889999999986 666 888999999999999998 77888899999999999999
Q ss_pred cccccCCCcccCCCCCCCEEEccCCcCCCcC-cccccCCCCCCEEEccCCcCcccCC
Q 035786 273 GLEGQLSEGLFPTLDQLQVVDLSGNKLDGAL-PATLFLRPNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 273 ~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~-p~~l~~~~~L~~L~Ls~N~l~g~~p 328 (693)
++++ +| .+..+++|+.|+|++|+|++.. |..+..+++|+.|+|++|+|++..|
T Consensus 497 ~l~~-lp--~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 497 ALEN-VD--GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCCC-CG--GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCC-Cc--ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 8886 55 3578888999999999988877 8888888888888888888887655
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.3e-18 Score=174.68 Aligned_cols=124 Identities=28% Similarity=0.398 Sum_probs=51.3
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|++|++++|.++. +| .+..+++|++|+|++|++++..| +.++++|++|+|++|++++ +|... . ++|++|+
T Consensus 40 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~ 112 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLF 112 (263)
T ss_dssp HTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEE
T ss_pred cCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEE
Confidence 4445555555554442 22 34444444444444444443222 4444444444444444443 22111 1 3444444
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 251 (693)
+++|.+++ +| .+..+++|+.|++++|++++. | .++.+++|++|++++|+++
T Consensus 113 L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 113 LDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp CCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 44444432 11 233444444444444444332 1 2333444444444444443
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.9e-18 Score=173.39 Aligned_cols=169 Identities=21% Similarity=0.250 Sum_probs=99.7
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+.++..++++.|.+++.. .+..+++|++|++++|.++. +| .+..+++|++|+|++|.+++..| +..+++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 455666677777776432 46667777777777777763 44 56667777777777777765433 66677777777
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|++++ +|... . ++|+.|+|++|++++. +.+..+++|++|++++|++++. | .+..+++|++|++++|++++
T Consensus 92 L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKN-LNGIP-S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSC-CTTCC-C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCC-cCccc-c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 77777664 33322 2 6666666666666642 2466666666666666666543 2 45555555555555555554
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCC
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDG 301 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g 301 (693)
. ..+..+++|+.|++++|.+++
T Consensus 165 ~---~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 165 T---GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp C---TTSTTCCCCCEEEEEEEEEEC
T ss_pred h---HHhccCCCCCEEeCCCCcccC
Confidence 3 123444445555555554443
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-17 Score=159.66 Aligned_cols=132 Identities=27% Similarity=0.373 Sum_probs=93.2
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCcc-ccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPA-TLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 199 (693)
+++++++|.++ .+|..+.. +|++|+|++|.+++..+. .|..+++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45666666664 45554432 666777777776655543 366777777777777777766677777777777777777
Q ss_pred ccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCc
Q 035786 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255 (693)
Q Consensus 200 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 255 (693)
|.+++..|..|..+++|++|+|++|++++.+|..|..+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 77777666667777788888888888887777778888888888888888876654
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.69 E-value=9.5e-17 Score=151.91 Aligned_cols=133 Identities=29% Similarity=0.299 Sum_probs=104.5
Q ss_pred CCCccEEEecCCCCC-cCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCee
Q 035786 117 LPALQVLDLRSCSLS-GSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 195 (693)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 577888999988887 77888888888899999999888865 678888888999999888887788888778888888
Q ss_pred ecccccCCCcC-cccccCCCCCCEEEccCCcccccCC---ccccCCCCCCEEEccCCcCc
Q 035786 196 NLASNFFTGQI-PSGLYSLSSIQFLNLSDNALTGFIP---SEVGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 196 ~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~L~Ls~N~l~ 251 (693)
++++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 88888887532 2567777777778877777775544 35667777777777777665
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.68 E-value=3.8e-19 Score=203.04 Aligned_cols=282 Identities=14% Similarity=0.069 Sum_probs=172.7
Q ss_pred ccCCCCCEEEccCCCCCCcCchHhh---hCCCCccEEEecCCC--CCcC-CCcccCCCccCCEEecccCcCCccCccccC
Q 035786 90 GNLTLLSSFNASGLSLPGSIPEWFG---YRLPALQVLDLRSCS--LSGS-IPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163 (693)
Q Consensus 90 ~~L~~L~~L~ls~~~l~g~ip~~~~---~~l~~L~~L~Ls~n~--l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 163 (693)
.++++|++|++++|.+.+..+.++. ..+++|++|+|++|. +... ++..+.++++|++|+|++|...+.+|..+.
T Consensus 153 ~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~ 232 (594)
T 2p1m_B 153 ATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQ 232 (594)
T ss_dssp HHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHH
T ss_pred HhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHh
Confidence 3789999999999987665544432 247799999999886 2211 122234568899999988833333666666
Q ss_pred CCCCCCEEEccCCC--------------------------CC----CcCchhhhcCcCCCeeecccccCCCcC-cccccC
Q 035786 164 ELKKLSNLDLSRNL--------------------------LT----GEIPNAISLLGNLTRLNLASNFFTGQI-PSGLYS 212 (693)
Q Consensus 164 ~l~~L~~L~Ls~N~--------------------------l~----~~~p~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~ 212 (693)
.+++|++|+++.+. +. +.+|..+..+++|++|++++|.+++.. +..+..
T Consensus 233 ~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~ 312 (594)
T 2p1m_B 233 RAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQ 312 (594)
T ss_dssp HCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTT
T ss_pred cCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhc
Confidence 77777777755442 11 124444456788888888888876432 233567
Q ss_pred CCCCCEEEccCCcccc-cCCccccCCCCCCEEEcc---------CCcCcccCchhhh-cCccccccccccccccccCCCc
Q 035786 213 LSSIQFLNLSDNALTG-FIPSEVGNLDKLIELDLS---------KNSISGSLPLELR-GLRNLAKLVISENGLEGQLSEG 281 (693)
Q Consensus 213 l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls---------~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~i~~~ 281 (693)
+++|+.|++++| ++. .++.....+++|++|+++ .+.+++.....+. ++++|++|.++.|.+++.....
T Consensus 313 ~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~ 391 (594)
T 2p1m_B 313 CPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALIT 391 (594)
T ss_dssp CTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHH
T ss_pred CCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHH
Confidence 788888888877 332 222223346778888773 3455543333333 4777888877777776544443
Q ss_pred ccCCCCCCCEEEcc--C----CcCCCc-----CcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccce
Q 035786 282 LFPTLDQLQVVDLS--G----NKLDGA-----LPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYG 350 (693)
Q Consensus 282 ~~~~l~~L~~L~Ls--~----N~l~g~-----~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g 350 (693)
+...+++|+.|+++ + |.++.. ++..+..+++|+.|+|++ ++++..+......+++|+.|++++|.+++
T Consensus 392 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~ 470 (594)
T 2p1m_B 392 IARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSD 470 (594)
T ss_dssp HHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSH
T ss_pred HHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcH
Confidence 33346777888877 3 455521 222245567777777766 55543332222235667777777777754
Q ss_pred ecCC---CCCCCCCEEEccCCcceee
Q 035786 351 DLNS---SSFRKFSLIDLSSNYFQGT 373 (693)
Q Consensus 351 ~~~~---~~~~~l~~ldLs~N~l~g~ 373 (693)
.... ..+++|+.|+|++|.+++.
T Consensus 471 ~~~~~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 471 LGMHHVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCSCCHH
T ss_pred HHHHHHHhcCCCcCEEECcCCCCcHH
Confidence 3221 2356777777777777543
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-16 Score=154.43 Aligned_cols=131 Identities=25% Similarity=0.313 Sum_probs=94.3
Q ss_pred CEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCch-hhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccC
Q 035786 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPN-AISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD 223 (693)
Q Consensus 145 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 223 (693)
+++++++|.++ .+|..+.. +|++|+|++|.+++..+. .+..+++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67888888885 56665543 788888888888765553 377777778888877777777777777777777777777
Q ss_pred CcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccC
Q 035786 224 NALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQL 278 (693)
Q Consensus 224 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 278 (693)
|++++..|..|.++++|++|+|++|++++..|..+..+++|++|+|++|.+++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 7777777777777777777777777777766666666666666666666665443
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.68 E-value=7.6e-17 Score=149.37 Aligned_cols=128 Identities=26% Similarity=0.265 Sum_probs=92.4
Q ss_pred CCCccEEEecCCCCC-cCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCee
Q 035786 117 LPALQVLDLRSCSLS-GSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 195 (693)
.++|+.|++++|.++ +.+|..++.+++|++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 466788888888887 67777778888888888888888765 667778888888888888877677777777778888
Q ss_pred ecccccCCCc-CcccccCCCCCCEEEccCCcccccCC---ccccCCCCCCEEEcc
Q 035786 196 NLASNFFTGQ-IPSGLYSLSSIQFLNLSDNALTGFIP---SEVGNLDKLIELDLS 246 (693)
Q Consensus 196 ~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~L~Ls 246 (693)
++++|.+++. .|..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777777653 33566666777777777776665444 345556666666554
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.5e-16 Score=150.56 Aligned_cols=133 Identities=22% Similarity=0.196 Sum_probs=86.9
Q ss_pred CccCCEEecccCcCC-ccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEE
Q 035786 141 LSRLNVLYLSGNSLA-GNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFL 219 (693)
Q Consensus 141 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 219 (693)
.++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 356777777777776 56666667777777777777777654 556666777777777777766666666666777777
Q ss_pred EccCCcccccC-CccccCCCCCCEEEccCCcCcccCc---hhhhcCcccccccccccccc
Q 035786 220 NLSDNALTGFI-PSEVGNLDKLIELDLSKNSISGSLP---LELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 220 ~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~L~Ls~N~l~ 275 (693)
++++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777766532 2556666666677776666665444 35566666666666666554
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-16 Score=147.48 Aligned_cols=129 Identities=22% Similarity=0.222 Sum_probs=104.1
Q ss_pred CccCCEEecccCcCC-ccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEE
Q 035786 141 LSRLNVLYLSGNSLA-GNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFL 219 (693)
Q Consensus 141 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 219 (693)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467889999999988 78888888889999999999988865 677888888888888888887778777778888888
Q ss_pred EccCCccccc-CCccccCCCCCCEEEccCCcCcccCc---hhhhcCcccccccccc
Q 035786 220 NLSDNALTGF-IPSEVGNLDKLIELDLSKNSISGSLP---LELRGLRNLAKLVISE 271 (693)
Q Consensus 220 ~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~L~Ls~ 271 (693)
++++|++++. .|..++.+++|++|++++|.+++..+ ..+..+++|++|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888888763 34678888888888888888887655 4677778888777753
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.6e-18 Score=197.84 Aligned_cols=205 Identities=16% Similarity=0.143 Sum_probs=109.5
Q ss_pred cCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCC-CCCcC-CCcccCCCccCCEEecccCcCCccCcccc----CC
Q 035786 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSC-SLSGS-IPGSFGNLSRLNVLYLSGNSLAGNVPATL----GE 164 (693)
Q Consensus 91 ~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n-~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----~~ 164 (693)
.++.|+.|+++++.+++..+..+...+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 56677777777777766666666534777777777777 34332 33344467777777777777665443333 35
Q ss_pred CCCCCEEEccCCC--CCC-cCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCc-------ccccCCccc
Q 035786 165 LKKLSNLDLSRNL--LTG-EIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNA-------LTGFIPSEV 234 (693)
Q Consensus 165 l~~L~~L~Ls~N~--l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-------l~g~~p~~~ 234 (693)
+++|++|++++|. ++. .++..+..+++|++|++++|...+.+|..+..+++|+.|+++.+. +.+ ++..+
T Consensus 183 ~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l 261 (594)
T 2p1m_B 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVAL 261 (594)
T ss_dssp CCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHH
T ss_pred CCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHH
Confidence 5677777777775 221 112223445777777777763222356666666777777644332 222 22234
Q ss_pred cCCCCCCEE-EccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCC
Q 035786 235 GNLDKLIEL-DLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGN 297 (693)
Q Consensus 235 ~~l~~L~~L-~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N 297 (693)
.++++|+.| .+.... .+.+|..+..+++|++|++++|.+++.....++..+++|+.|++++|
T Consensus 262 ~~~~~L~~Ls~~~~~~-~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 324 (594)
T 2p1m_B 262 SGCKELRCLSGFWDAV-PAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY 324 (594)
T ss_dssp HTCTTCCEEECCBTCC-GGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG
T ss_pred hcCCCcccccCCcccc-hhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc
Confidence 444444444 222211 12233333444555555555555443322222334455555555554
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.8e-15 Score=143.13 Aligned_cols=132 Identities=23% Similarity=0.234 Sum_probs=86.6
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 200 (693)
+.+++++|+++. +|..+ .++|++|++++|++++..+..+..+++|++|+|++|.+++..+..+..+++|++|++++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 455666666552 34332 246666666666666555555666667777777777766555555666777777777777
Q ss_pred cCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCc
Q 035786 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255 (693)
Q Consensus 201 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 255 (693)
.+++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7766555556777777777777777776555556777788888888887776554
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.6e-15 Score=145.62 Aligned_cols=127 Identities=25% Similarity=0.345 Sum_probs=71.8
Q ss_pred EEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccccc
Q 035786 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201 (693)
Q Consensus 122 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 201 (693)
++++++|.++ .+|..+. ++|++|+|++|.++ .+|..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4555555554 3343332 35555555555554 444555555555566665555555555555555556666666666
Q ss_pred CCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc
Q 035786 202 FTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252 (693)
Q Consensus 202 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 252 (693)
+++..|..|..+++|+.|+|++|++++..+..|..+++|+.|++++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 555555556666666666666666665444456666666666666666653
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.2e-15 Score=144.97 Aligned_cols=127 Identities=26% Similarity=0.299 Sum_probs=85.0
Q ss_pred CEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCC
Q 035786 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDN 224 (693)
Q Consensus 145 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 224 (693)
+++++++|.++ .+|..+. ++|++|+|++|.++ .+|..+..+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 56777777776 4565443 56777777777776 56677777777777777777777666666777777777777777
Q ss_pred cccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc
Q 035786 225 ALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 225 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 777666666677777777777777766544444555555555555555543
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.8e-15 Score=142.18 Aligned_cols=128 Identities=22% Similarity=0.255 Sum_probs=64.0
Q ss_pred CCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccC
Q 035786 144 LNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD 223 (693)
Q Consensus 144 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 223 (693)
.+.+++++|.++ .+|..+ .++|++|++++|++++..+..+..+++|++|++++|.+++..+..+..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 355666666665 334332 24566666666666544444455555555555555555544444445555555555555
Q ss_pred CcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccc
Q 035786 224 NALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGL 274 (693)
Q Consensus 224 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 274 (693)
|++++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 136 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 136 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCe
Confidence 555544444445555555555555555433333333333333333333333
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.7e-15 Score=159.12 Aligned_cols=135 Identities=13% Similarity=0.125 Sum_probs=97.8
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc---------------CHHHH--------HHHHHHHhcCCCCCcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF---------------KKESY--------MMELDLFSRVSHARLV 570 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~---------------~~~~f--------~~Ei~~l~~l~H~niv 570 (693)
|.....||+|+||.||+|..++|+.||||.+..... ....+ .+|...|.++++..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 667789999999999999988999999998753211 01122 2456666666555443
Q ss_pred ceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCe
Q 035786 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSI 650 (693)
Q Consensus 571 ~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NI 650 (693)
...-+... ..+|||||++++.|.++... -+ ...++.+++.+|.|||.. +||||||||.||
T Consensus 177 vp~p~~~~---~~~LVME~i~G~~L~~l~~~-----------~~---~~~l~~qll~~l~~lH~~---gIVHrDLKp~NI 236 (397)
T 4gyi_A 177 VPEPIAQS---RHTIVMSLVDALPMRQVSSV-----------PD---PASLYADLIALILRLAKH---GLIHGDFNEFNI 236 (397)
T ss_dssp CCCEEEEE---TTEEEEECCSCEEGGGCCCC-----------SC---HHHHHHHHHHHHHHHHHT---TEECSCCSTTSE
T ss_pred CCeeeecc---CceEEEEecCCccHhhhccc-----------HH---HHHHHHHHHHHHHHHHHC---CCcCCCCCHHHE
Confidence 22222221 24799999999988765421 11 235788999999999988 899999999999
Q ss_pred eeCCCCc----------eEECCcccccc
Q 035786 651 LLDDKFE----------VRLGSLSELHA 668 (693)
Q Consensus 651 Lld~~~~----------~ki~Dfgla~~ 668 (693)
|+++++. +.|.||+=+-.
T Consensus 237 Ll~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 237 LIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred EEeCCCCcccccccccceEEEEeCCccc
Confidence 9998773 88999986544
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-17 Score=161.68 Aligned_cols=133 Identities=26% Similarity=0.398 Sum_probs=60.7
Q ss_pred CCccEEEecCCCCCcCCCc------ccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcC
Q 035786 118 PALQVLDLRSCSLSGSIPG------SFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGN 191 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 191 (693)
+.++.++++.+.++|.+|. .|+++++|++|+|++|.+++ +| .+..+++|++|++++|.++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3344444444444444333 44444444444444444443 33 4444444555555555444 34444444445
Q ss_pred CCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCC-ccccCCCCCCEEEccCCcCcccCc
Q 035786 192 LTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIP-SEVGNLDKLIELDLSKNSISGSLP 255 (693)
Q Consensus 192 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p 255 (693)
|++|++++|.+++ +| .+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+++.+|
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 5555555555443 22 34444445555555554443211 234455555555555555544433
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.56 E-value=4.3e-15 Score=156.65 Aligned_cols=102 Identities=17% Similarity=0.261 Sum_probs=85.0
Q ss_pred CCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCC-EEEccCCcCCCcCcccccCCCCCCE
Q 035786 237 LDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQ-VVDLSGNKLDGALPATLFLRPNLRF 315 (693)
Q Consensus 237 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~-~L~Ls~N~l~g~~p~~l~~~~~L~~ 315 (693)
+++|+.|+|++|+++...+..|.++++|+.+++++| ++ .|+...|.++++|+ .+++.+ +++..-+..|..+++|+.
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCE
Confidence 678999999998888777778899999999999888 54 68888889999998 999988 777677788888999999
Q ss_pred EEccCCcCcccCCccCcCCCCCCcEEE
Q 035786 316 LDLSRNNITGSWPILSTNGNASGAVFN 342 (693)
Q Consensus 316 L~Ls~N~l~g~~p~~~~~~~~~l~~l~ 342 (693)
|++++|+++ .++...+..+.+|+.++
T Consensus 302 l~l~~n~i~-~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 302 VLATGDKIT-TLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEECSSCCC-EECTTTTCTTCCCCEEE
T ss_pred EEeCCCccC-ccchhhhcCCcchhhhc
Confidence 999999887 56656777788888775
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.56 E-value=3.2e-17 Score=159.76 Aligned_cols=155 Identities=24% Similarity=0.262 Sum_probs=127.9
Q ss_pred cccCCCCCEEEccCCCCCCcCch------HhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCcccc
Q 035786 89 LGNLTLLSSFNASGLSLPGSIPE------WFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATL 162 (693)
Q Consensus 89 l~~L~~L~~L~ls~~~l~g~ip~------~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 162 (693)
+.....++.++++.+.+.|.+|. .+.. +++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~-l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLST-LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHH-TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhc-CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchh
Confidence 34455666677777778887776 7875 9999999999999987 67 8999999999999999998 678888
Q ss_pred CCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCc-ccccCCCCCCEEEccCCcccccCCcc--------
Q 035786 163 GELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIP-SGLYSLSSIQFLNLSDNALTGFIPSE-------- 233 (693)
Q Consensus 163 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~-------- 233 (693)
..+++|++|+|++|.+++ +| .+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+++.+|..
T Consensus 90 ~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 167 (198)
T 1ds9_A 90 AVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRI 167 (198)
T ss_dssp HHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHH
T ss_pred hcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHH
Confidence 888999999999999996 55 68999999999999999985332 47889999999999999998876653
Q ss_pred --ccCCCCCCEEEccCCcCc
Q 035786 234 --VGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 234 --~~~l~~L~~L~Ls~N~l~ 251 (693)
+..+++|+.|| +|.++
T Consensus 168 ~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 168 EVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHCSSCSEEC--CGGGT
T ss_pred HHHHhCCCcEEEC--CcccC
Confidence 56666676665 44443
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.9e-15 Score=156.99 Aligned_cols=261 Identities=15% Similarity=0.103 Sum_probs=168.1
Q ss_pred CCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCC--cCCCcccCCCccCCEEecccCcCCccCccccCC-----
Q 035786 92 LTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLS--GSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGE----- 164 (693)
Q Consensus 92 L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~--g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----- 164 (693)
+..++.|.++++ +.+.--..+...+++|+.|||++|++. ...+. .++.++.+.+..|.+. +..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I~---~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFVP---AYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEEC---TTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccccC---HHHhccccccc
Confidence 556777777643 111111123333788999999999987 22222 2223445555554322 234555
Q ss_pred ---CCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcc----cccCCccccCC
Q 035786 165 ---LKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNAL----TGFIPSEVGNL 237 (693)
Q Consensus 165 ---l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l----~g~~p~~~~~l 237 (693)
+++|+.|+|.+ .++..-+.+|.++++|+.|++++|.+....+..|..+.++..+.+..+.. ...-...|.++
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 78888888877 66655556777788888888888877755566677766666666554221 11122233333
Q ss_pred CCCC--------------------------EEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCE
Q 035786 238 DKLI--------------------------ELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQV 291 (693)
Q Consensus 238 ~~L~--------------------------~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~ 291 (693)
..|+ .+.+.++-...........+++|+.++|++|+++ .|++..|.++++|+.
T Consensus 176 ~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~ 254 (329)
T 3sb4_A 176 EPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLK 254 (329)
T ss_dssp CCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCE
T ss_pred cccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCE
Confidence 3333 3333332111111111124789999999999987 788889999999999
Q ss_pred EEccCCcCCCcCcccccCCCCCC-EEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC--CCCCCCCEEE
Q 035786 292 VDLSGNKLDGALPATLFLRPNLR-FLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS--SSFRKFSLID 364 (693)
Q Consensus 292 L~Ls~N~l~g~~p~~l~~~~~L~-~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~--~~~~~l~~ld 364 (693)
+++.+| ++..-+..|..+++|+ .+++.+ +++ .|+...+..+.+|+.+++++|++...-+. ..+++|+.+.
T Consensus 255 l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 255 IKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EECCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 999998 7777778889999999 999998 676 56667788999999999999988754332 3455676664
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.1e-14 Score=138.85 Aligned_cols=128 Identities=22% Similarity=0.249 Sum_probs=70.1
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCc-cCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLS-RLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 195 (693)
+++|+.|+|++|.++. +|. +..+. +|++|+|++|.+++. +.+..+++|++|+|++|.+++..|..+..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 5666777777776663 343 33333 666666666666653 456666666666666666664433344566666666
Q ss_pred ecccccCCCcCcc--cccCCCCCCEEEccCCcccccCCcc----ccCCCCCCEEEccCCcC
Q 035786 196 NLASNFFTGQIPS--GLYSLSSIQFLNLSDNALTGFIPSE----VGNLDKLIELDLSKNSI 250 (693)
Q Consensus 196 ~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~----~~~l~~L~~L~Ls~N~l 250 (693)
++++|.++ .+|. .+..+++|+.|++++|.++. +|.. +..+++|+.||++.|..
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 66666653 3443 45555555555555555542 2332 44444444444444433
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.52 E-value=2e-14 Score=137.08 Aligned_cols=133 Identities=19% Similarity=0.190 Sum_probs=79.5
Q ss_pred cCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCC
Q 035786 138 FGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQ 217 (693)
Q Consensus 138 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 217 (693)
+.++++|+.|+|++|.++. +|......++|++|+|++|.+++. ..+..+++|++|++++|.+++..|..+..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 4456666666666666663 343222223666666666666643 4566666666666666666644333346666666
Q ss_pred EEEccCCcccccCCc--cccCCCCCCEEEccCCcCcccCch----hhhcCcccccccccccccc
Q 035786 218 FLNLSDNALTGFIPS--EVGNLDKLIELDLSKNSISGSLPL----ELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 218 ~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~----~~~~l~~L~~L~Ls~N~l~ 275 (693)
+|++++|+++ .+|. .+..+++|+.|++++|.++. +|. .+..+++|+.|++++|.+.
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6666666664 3444 56666666666666666653 343 2666666666666666554
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.45 E-value=4.6e-13 Score=126.85 Aligned_cols=107 Identities=29% Similarity=0.302 Sum_probs=65.3
Q ss_pred CEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCC
Q 035786 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDN 224 (693)
Q Consensus 145 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 224 (693)
+.+++++|.++. +|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 455555555542 444332 55666666666666555555666666666666666666554555566667777777777
Q ss_pred cccccCCccccCCCCCCEEEccCCcCcccC
Q 035786 225 ALTGFIPSEVGNLDKLIELDLSKNSISGSL 254 (693)
Q Consensus 225 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 254 (693)
++++..+..|.++++|++|+|++|.++...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 776655556677777777777777776543
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.44 E-value=3.8e-12 Score=137.54 Aligned_cols=239 Identities=10% Similarity=0.087 Sum_probs=155.8
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecc
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 198 (693)
+|+.++|..+ ++..-..+|.++ +|+.+.|.. .+...-+..|.++++|+.++|+.|.++..-...|. ..+|+.+.+.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 6777777665 554555567664 677777775 56555566777788888888877777744344444 5777777777
Q ss_pred cccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc---
Q 035786 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE--- 275 (693)
Q Consensus 199 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--- 275 (693)
.+ ++..-...|.++++|+.+++..| ++..-...|.+ .+|+.+++ .|.++..-+..|.++++|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~ 287 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDP 287 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCc
Confidence 44 55444566777778888887764 45444455666 67777777 34566555667777888888887777653
Q ss_pred -ccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC
Q 035786 276 -GQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS 354 (693)
Q Consensus 276 -g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~ 354 (693)
..++...|..+++|+.+++. |.++..-...|..+++|+.++|..| ++ .++...+..+ .|+.+++++|.+.- ++.
T Consensus 288 ~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~-~L~~l~l~~n~~~~-l~~ 362 (401)
T 4fdw_A 288 EAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNT-GIKEVKVEGTTPPQ-VFE 362 (401)
T ss_dssp TCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSS-CCCEEEECCSSCCB-CCC
T ss_pred ccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCC-CCCEEEEcCCCCcc-ccc
Confidence 13666777778888888887 4466555666777788888888554 44 4554555666 78888887776543 222
Q ss_pred CC---C-CCCCEEEccCCcc
Q 035786 355 SS---F-RKFSLIDLSSNYF 370 (693)
Q Consensus 355 ~~---~-~~l~~ldLs~N~l 370 (693)
.. + ..+..|.+..|.+
T Consensus 363 ~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 363 KVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp SSCCCSCTTCCEEEECGGGH
T ss_pred ccccCCCCCccEEEeCHHHH
Confidence 22 2 2456666666543
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.44 E-value=4.8e-13 Score=126.70 Aligned_cols=105 Identities=27% Similarity=0.346 Sum_probs=64.7
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 200 (693)
+.+++++|.++. +|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 455666665553 444442 55666666666666655666666666666666666666555555566666666666666
Q ss_pred cCCCcCcccccCCCCCCEEEccCCcccc
Q 035786 201 FFTGQIPSGLYSLSSIQFLNLSDNALTG 228 (693)
Q Consensus 201 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 228 (693)
++++..+..|..+++|+.|+|++|.++.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 6665555556666777777777776654
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.41 E-value=9.3e-13 Score=125.25 Aligned_cols=87 Identities=26% Similarity=0.266 Sum_probs=42.7
Q ss_pred CCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEc
Q 035786 166 KKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDL 245 (693)
Q Consensus 166 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 245 (693)
++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34444444444444444444444444444444444444333333445555555555555555444444555555666666
Q ss_pred cCCcCcc
Q 035786 246 SKNSISG 252 (693)
Q Consensus 246 s~N~l~g 252 (693)
++|.+..
T Consensus 113 ~~N~~~c 119 (174)
T 2r9u_A 113 YNNPWDC 119 (174)
T ss_dssp CSSCBCT
T ss_pred CCCCccc
Confidence 6665553
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.1e-12 Score=124.77 Aligned_cols=105 Identities=22% Similarity=0.326 Sum_probs=82.2
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 200 (693)
+.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67888888875 5666654 77888888888888777888888888888888888888665556678888888888888
Q ss_pred cCCCcCcccccCCCCCCEEEccCCcccc
Q 035786 201 FFTGQIPSGLYSLSSIQFLNLSDNALTG 228 (693)
Q Consensus 201 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 228 (693)
++++..+..+..+++|+.|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 8886555567888888888888888764
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.40 E-value=9.8e-12 Score=134.28 Aligned_cols=237 Identities=15% Similarity=0.159 Sum_probs=122.0
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeec
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 197 (693)
..++.+.+.+ .++..-+.+|.+. +|+.+.|..| ++..-...|.+. +|+.+++.. .++..-+.+|.++.+|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4444444433 2333334455553 5666666554 443434455553 466666654 444344455666666666666
Q ss_pred ccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccccc
Q 035786 198 ASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQ 277 (693)
Q Consensus 198 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 277 (693)
+.|.++. +|.......+|+.+.|..+ ++..-...|.++++|+.+++..| ++..-...|.+ .+|+.+.+. |.++ .
T Consensus 188 ~~n~l~~-I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~-~ 261 (401)
T 4fdw_A 188 SKTKITK-LPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVT-N 261 (401)
T ss_dssp TTSCCSE-ECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCC-E
T ss_pred CCCcceE-echhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCcc-E
Confidence 6666553 3332223456666666533 44444455666666666666543 34334444554 456666663 3333 4
Q ss_pred CCCcccCCCCCCCEEEccCCcCC-----CcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceec
Q 035786 278 LSEGLFPTLDQLQVVDLSGNKLD-----GALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDL 352 (693)
Q Consensus 278 i~~~~~~~l~~L~~L~Ls~N~l~-----g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~ 352 (693)
|+...|..+++|+.+++.+|.+. ...+..|..+++|+.++|.+ +++ .++...+..+.+|+.+++.+| +. .|
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~-~I~~~aF~~c~~L~~l~lp~~-l~-~I 337 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR-ILGQGLLGGNRKVTQLTIPAN-VT-QI 337 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC-EECTTTTTTCCSCCEEEECTT-CC-EE
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE-EEhhhhhcCCCCccEEEECcc-cc-EE
Confidence 55555666666666666665554 23344555566666666663 343 444445555566666666444 22 12
Q ss_pred CC---CCCCCCCEEEccCCcc
Q 035786 353 NS---SSFRKFSLIDLSSNYF 370 (693)
Q Consensus 353 ~~---~~~~~l~~ldLs~N~l 370 (693)
+. ..+ +|+.+++++|.+
T Consensus 338 ~~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 338 NFSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp CTTSSSSS-CCCEEEECCSSC
T ss_pred cHHhCCCC-CCCEEEEcCCCC
Confidence 22 223 566666666543
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.6e-13 Score=146.98 Aligned_cols=135 Identities=22% Similarity=0.199 Sum_probs=59.6
Q ss_pred CCCCEEEccCCCCCCcCchHhhh----CCCCccEEEecCCCCCcCCCccc-CCCccCCEEecccCcCCccCcccc-----
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGY----RLPALQVLDLRSCSLSGSIPGSF-GNLSRLNVLYLSGNSLAGNVPATL----- 162 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~----~l~~L~~L~Ls~n~l~g~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~----- 162 (693)
+.|+.|++++|.++..-...+.. ..++|++|+|++|.++..-...+ ..+++|+.|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 44556666666655432222221 12456666666665543222222 223455555555555543222222
Q ss_pred CCCCCCCEEEccCCCCCC----cCchhhhcCcCCCeeecccccCCCc----CcccccCCCCCCEEEccCCccc
Q 035786 163 GELKKLSNLDLSRNLLTG----EIPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNALT 227 (693)
Q Consensus 163 ~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~ 227 (693)
...++|++|+|++|.++. .++..+..+++|++|+|++|.++.. ++..+...++|+.|+|++|.++
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 233455555555555542 1233334444555555555554321 1223333444444444444443
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.6e-13 Score=146.79 Aligned_cols=167 Identities=22% Similarity=0.189 Sum_probs=81.3
Q ss_pred CCCccEEEecCCCCCcCCCcccC-----CCccCCEEecccCcCCccCcccc-CCCCCCCEEEccCCCCCCcCchhhh---
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFG-----NLSRLNVLYLSGNSLAGNVPATL-GELKKLSNLDLSRNLLTGEIPNAIS--- 187 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~-----~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~--- 187 (693)
++.|+.|+|++|.++......+. +.++|++|+|++|.++......+ ..+++|++|+|++|.++..-...+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 46677888888777653322222 22566777777776653322222 2344566666666666543222221
Q ss_pred --cCcCCCeeecccccCCC----cCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcC
Q 035786 188 --LLGNLTRLNLASNFFTG----QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGL 261 (693)
Q Consensus 188 --~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 261 (693)
..++|+.|+|++|.++. .++..+..+++|++|+|++|.++..-. ..++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~--------------------~~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGL--------------------ELLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHH--------------------HHHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHH--------------------HHHHHHHhcC
Confidence 23455555555555542 122233344445555555554432110 0112333444
Q ss_pred cccccccccccccccc----CCCcccCCCCCCCEEEccCCcCCCcCc
Q 035786 262 RNLAKLVISENGLEGQ----LSEGLFPTLDQLQVVDLSGNKLDGALP 304 (693)
Q Consensus 262 ~~L~~L~Ls~N~l~g~----i~~~~~~~l~~L~~L~Ls~N~l~g~~p 304 (693)
++|++|+|++|.+++. +... +...++|++|+|++|.|+..-.
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~-L~~~~~L~~L~Ls~N~i~~~g~ 256 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARA-AREHPSLELLHLYFNELSSEGR 256 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHH-HHHCSSCCEEECTTSSCCHHHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHH-HHhCCCCCEEeccCCCCCHHHH
Confidence 4555555555554421 1111 1234567777888887765433
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.6e-11 Score=130.00 Aligned_cols=78 Identities=24% Similarity=0.278 Sum_probs=38.3
Q ss_pred EecCC-CCCcCCCcccCCCccCCEEeccc-CcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccccc
Q 035786 124 DLRSC-SLSGSIPGSFGNLSRLNVLYLSG-NSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNF 201 (693)
Q Consensus 124 ~Ls~n-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 201 (693)
+++++ .+++ +|. |+.+++|++|+|++ |.|.+..|..|.+|++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 14 ~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 44444 4442 444 55555555555553 55554444445555555555555555554444444444444444444444
Q ss_pred CC
Q 035786 202 FT 203 (693)
Q Consensus 202 l~ 203 (693)
|+
T Consensus 92 l~ 93 (347)
T 2ifg_A 92 LE 93 (347)
T ss_dssp CS
T ss_pred cc
Confidence 44
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.24 E-value=1.8e-11 Score=129.63 Aligned_cols=106 Identities=25% Similarity=0.223 Sum_probs=92.4
Q ss_pred CEEecccC-cCCccCccccCCCCCCCEEEccC-CCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEcc
Q 035786 145 NVLYLSGN-SLAGNVPATLGELKKLSNLDLSR-NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLS 222 (693)
Q Consensus 145 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 222 (693)
..++++++ .++ .+|. +..+++|++|+|++ |.|++..|..|..+++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688888 887 4788 99999999999996 99998888889999999999999999999888899999999999999
Q ss_pred CCcccccCCccccCCCCCCEEEccCCcCccc
Q 035786 223 DNALTGFIPSEVGNLDKLIELDLSKNSISGS 253 (693)
Q Consensus 223 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 253 (693)
+|+|++..+..|..++ |+.|+|.+|.+...
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 9999977666666665 99999999999854
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=8.6e-11 Score=119.20 Aligned_cols=146 Identities=12% Similarity=-0.028 Sum_probs=110.6
Q ss_pred HHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccc-cCHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEE
Q 035786 508 LRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHS-FKKESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 508 ~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~-~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~l 585 (693)
......|......+.|+.+.||+.... |..+++|...... .....+.+|++++..++ |..+.++++++.. .+..|+
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~-~~~~~l 87 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH-DGWSNL 87 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-CCceEE
Confidence 344456766677888888999999864 6789999986422 22346889999999885 6677889888765 467899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccC------------------------------
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHE------------------------------ 635 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~------------------------------ 635 (693)
||||+++.+|.+.+.. ......++.+++++++.||.-
T Consensus 88 v~e~i~G~~l~~~~~~-------------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (263)
T 3tm0_A 88 LMSEADGVLCSEEYED-------------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVD 154 (263)
T ss_dssp EEECCSSEEHHHHCCT-------------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCS
T ss_pred EEEecCCeehhhccCC-------------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccc
Confidence 9999999998875311 112346888899999999971
Q ss_pred --------------------------CCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 636 --------------------------CNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 636 --------------------------~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
..+.++|+|+++.||+++++..+.|.||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 155 CENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766677999998755
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.4e-10 Score=117.05 Aligned_cols=132 Identities=14% Similarity=0.084 Sum_probs=96.8
Q ss_pred ccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCc--cceeEEEEcCCCeeEEEEccCCCCChh
Q 035786 519 LIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARL--VPLLGQCLEHETEKLLVYKYMVCGDLA 596 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~ni--v~l~g~~~~~~~~~~lv~ey~~~GsL~ 596 (693)
+.+.|..+.||+....+|..++||..... ....+.+|++++..+++.++ .+++++... ++..++||||+++.+|.
T Consensus 27 ~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~-~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 27 QTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTE-AGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-SSCEEEEEECCSSEETT
T ss_pred cccCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-CCCCEEEEEecCCcccC
Confidence 33456679999998888889999987543 23468889999999976554 457776654 35679999999998884
Q ss_pred hhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC----------------------------------------
Q 035786 597 SSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC---------------------------------------- 636 (693)
Q Consensus 597 ~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~---------------------------------------- 636 (693)
... .+ +..++.++++.++.||...
T Consensus 104 --~~~-----------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 104 --SSH-----------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp --TSC-----------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred --cCc-----------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 211 11 2256677777777777531
Q ss_pred ---------------CCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 637 ---------------NPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 637 ---------------~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
.+.++|+|++|.||+++++..++|.||+.+...
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 123999999999999988766789999997763
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.1e-09 Score=114.38 Aligned_cols=142 Identities=13% Similarity=0.158 Sum_probs=105.6
Q ss_pred ccCccccCCeeeEEEEEeCCCcEEEEEEec--cccc--CHHHHHHHHHHHhcCC--CCCccceeEEEEcCC--CeeEEEE
Q 035786 516 ETNLIKKGHSGDLFKGTLAGGTTVVVKKVS--LHSF--KKESYMMELDLFSRVS--HARLVPLLGQCLEHE--TEKLLVY 587 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~--~~~~--~~~~f~~Ei~~l~~l~--H~niv~l~g~~~~~~--~~~~lv~ 587 (693)
..+.++.|.++.||+.+..+ ..+++|+.. .... ....+.+|.+++..++ +..+.+++++|.+.+ +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 34578999999999998765 578888775 3321 2456888999999997 455788888775431 2478999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-------------------------------
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC------------------------------- 636 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~------------------------------- 636 (693)
||+++..+.+.. ...++..++..++.++++.|+.||...
T Consensus 121 e~v~G~~l~~~~----------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (359)
T 3dxp_A 121 EFVSGRVLWDQS----------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSE 190 (359)
T ss_dssp ECCCCBCCCCTT----------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHC
T ss_pred EecCCeecCCCc----------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcC
Confidence 999998775321 123788889999999999999999720
Q ss_pred ------------------------CCCeEecCCCCCCeeeCCCCc--eEECCcccccc
Q 035786 637 ------------------------NPPLVHRDVQASSILLDDKFE--VRLGSLSELHA 668 (693)
Q Consensus 637 ------------------------~p~iiHrDlk~~NILld~~~~--~ki~Dfgla~~ 668 (693)
.+.++|+|+++.||+++++.. +.|.||+.+..
T Consensus 191 ~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 191 TESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997753 68999998775
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.89 E-value=4.6e-08 Score=105.32 Aligned_cols=248 Identities=12% Similarity=0.058 Sum_probs=113.0
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCc--------------
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNS-------------- 153 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~-------------- 153 (693)
.+.+++.|+.+.+..+ + ..|++.-..++++|+.++|..+ ++..-...|.++++|+.+.+..+-
T Consensus 66 AF~~c~~L~~i~lp~~-i-~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPST-V-REIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTCTTEEEEECCTT-C-CEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCS
T ss_pred HhhCCCCceEEEeCCC-c-cCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeeccccc
Confidence 3445566666666532 2 2344332334666666666543 333334455555555555443221
Q ss_pred -------CCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcc
Q 035786 154 -------LAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNAL 226 (693)
Q Consensus 154 -------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 226 (693)
....-...|.++++|+.+.+..+. ...-...|.++.+|+.+.+..| ++..-...+.++..|+.+.+..+..
T Consensus 143 ~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~ 220 (394)
T 4fs7_A 143 EITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLY 220 (394)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCC
T ss_pred ccccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCce
Confidence 111112346666777777776543 2233445666667777766654 3322334455556666555544432
Q ss_pred cccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccc-------------------ccCCCcccCCCC
Q 035786 227 TGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLE-------------------GQLSEGLFPTLD 287 (693)
Q Consensus 227 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-------------------g~i~~~~~~~l~ 287 (693)
. +.+.....++|+.+.+..+ ++..-...+.++.+|+.+.+..+... ..++...|..+.
T Consensus 221 ~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~ 297 (394)
T 4fs7_A 221 Y--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCS 297 (394)
T ss_dssp E--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTTTTTCT
T ss_pred E--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeeccccccccc
Confidence 1 1222223334444444322 12122233444445555544443321 012333344445
Q ss_pred CCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCC
Q 035786 288 QLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNN 346 (693)
Q Consensus 288 ~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N 346 (693)
+|+.+.+..+ ++..-...|..+.+|+.++|.++ ++ .|+...+..+.+|+.+++..|
T Consensus 298 ~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 298 SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred cccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc
Confidence 5555555433 33233334444555555555432 32 333334444455555555443
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.85 E-value=8.5e-10 Score=117.07 Aligned_cols=165 Identities=14% Similarity=0.154 Sum_probs=80.4
Q ss_pred ccccCCCCCEEEccCCCC---------CCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccC
Q 035786 88 SLGNLTLLSSFNASGLSL---------PGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNV 158 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l---------~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~ 158 (693)
++.++++|+.|.+..+.. .+.++..+. .+|+|+.|+|++|.-. .++. +. +++|+.|+|..|.+....
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~-~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~ 209 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLD-AMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSV 209 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHH-TCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHH
T ss_pred hhhhcchhhheeecCcchhhcccccccccCHHHHHh-cCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHH
Confidence 355677888887765432 123444443 3677777777766211 1222 22 556666666665554322
Q ss_pred ccccC--CCCCCCEEEccC--CCCCCcCchhhhcCcCCCeeecccccCCCcCcccc--cCCCCCCEEEccCCcccccCCc
Q 035786 159 PATLG--ELKKLSNLDLSR--NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGL--YSLSSIQFLNLSDNALTGFIPS 232 (693)
Q Consensus 159 p~~~~--~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p~ 232 (693)
...+. .+++|++|+|+. |...+... + . .+...+ ..+++|+.|+|.+|.++...+.
T Consensus 210 l~~l~~~~lp~L~~L~L~~~~~~~~~~~~--~----------------~-~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~ 270 (362)
T 2ra8_A 210 VEDILGSDLPNLEKLVLYVGVEDYGFDGD--M----------------N-VFRPLFSKDRFPNLKWLGIVDAEEQNVVVE 270 (362)
T ss_dssp HHHHHHSBCTTCCEEEEECBCGGGTCCSC--G----------------G-GTGGGSCTTTCTTCCEEEEESCTTHHHHHH
T ss_pred HHHHHHccCCCCcEEEEeccccccccchh--H----------------H-HHHHHHhcCCCCCcCEEeCCCCCCchHHHH
Confidence 22222 456666666542 11111000 0 0 000011 2345666666666665432222
Q ss_pred cc---cCCCCCCEEEccCCcCccc----CchhhhcCcccccccccccccc
Q 035786 233 EV---GNLDKLIELDLSKNSISGS----LPLELRGLRNLAKLVISENGLE 275 (693)
Q Consensus 233 ~~---~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~ 275 (693)
.+ ..+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.++
T Consensus 271 ~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 271 MFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp HHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 22 2355666666666666543 2333345566677777766654
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.1e-09 Score=114.08 Aligned_cols=182 Identities=15% Similarity=0.136 Sum_probs=100.9
Q ss_pred CCCCccEEEecCCCCC---------cCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhh
Q 035786 116 RLPALQVLDLRSCSLS---------GSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAI 186 (693)
Q Consensus 116 ~l~~L~~L~Ls~n~l~---------g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 186 (693)
.+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .++. +. +++|++|+|..|.++......+
T Consensus 137 ~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l 213 (362)
T 2ra8_A 137 KFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDI 213 (362)
T ss_dssp HHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHH
T ss_pred hcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHH
Confidence 3788888888665331 112233345556666666555211 1222 22 4556666655555443222222
Q ss_pred h--cCcCCCeeeccc--ccCCCcCcccccCCCCCCEEEccCCcccccCCccc--cCCCCCCEEEccCCcCcccCchhhh-
Q 035786 187 S--LLGNLTRLNLAS--NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEV--GNLDKLIELDLSKNSISGSLPLELR- 259 (693)
Q Consensus 187 ~--~l~~L~~L~Ls~--N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~~- 259 (693)
. .+++|++|+|+. |...+.. . +.+ +...+ ..+++|++|+|++|.++...+..+.
T Consensus 214 ~~~~lp~L~~L~L~~~~~~~~~~~--~----------------~~~-l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~ 274 (362)
T 2ra8_A 214 LGSDLPNLEKLVLYVGVEDYGFDG--D----------------MNV-FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLE 274 (362)
T ss_dssp HHSBCTTCCEEEEECBCGGGTCCS--C----------------GGG-TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHH
T ss_pred HHccCCCCcEEEEeccccccccch--h----------------HHH-HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHh
Confidence 2 344555555432 1111100 0 000 01112 3578999999999999865544443
Q ss_pred --cCcccccccccccccccc----CCCcccCCCCCCCEEEccCCcCCCcCcccccC-CCCCCEEEccCCc
Q 035786 260 --GLRNLAKLVISENGLEGQ----LSEGLFPTLDQLQVVDLSGNKLDGALPATLFL-RPNLRFLDLSRNN 322 (693)
Q Consensus 260 --~l~~L~~L~Ls~N~l~g~----i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~-~~~L~~L~Ls~N~ 322 (693)
.+++|++|+|+.|.+++. ++..+ ..+++|+.|++++|.++...-..+.. + ...++++.|+
T Consensus 275 a~~~~~L~~LdLs~n~L~d~G~~~L~~~L-~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 275 SDILPQLETMDISAGVLTDEGARLLLDHV-DKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp CSSGGGCSEEECCSSCCBHHHHHHHHTTH-HHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CccCCCCCEEECCCCCCChHHHHHHHhhc-ccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 578999999999999763 33322 45789999999999987543322221 1 3457777776
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.4e-07 Score=101.52 Aligned_cols=246 Identities=13% Similarity=0.090 Sum_probs=151.4
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCC---------------------CCCcCCCcccCCCccCCE
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSC---------------------SLSGSIPGSFGNLSRLNV 146 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n---------------------~l~g~~p~~~~~l~~L~~ 146 (693)
.+.+++.|+.+++..+ + ..|++.....+++|+.+.+..+ .....-...|.++++|+.
T Consensus 89 aF~~c~~L~~i~lp~~-l-~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~ 166 (394)
T 4fs7_A 89 AFENCSKLEIINIPDS-V-KMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEY 166 (394)
T ss_dssp TTTTCTTCCEECCCTT-C-CEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCE
T ss_pred HhhCCCCCcEEEeCCC-c-eEccchhhcccccchhhcccCceeeecceeeecccccccccCccccccchhhhcccCCCcE
Confidence 4667788888877643 1 1233322223444444433321 111112345778888888
Q ss_pred EecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCC---------------------Cc
Q 035786 147 LYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFT---------------------GQ 205 (693)
Q Consensus 147 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---------------------g~ 205 (693)
+.+..+. ...-...|.++++|+.+++..| ++..-...+.++..|+.+.+..+... ..
T Consensus 167 i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i 244 (394)
T 4fs7_A 167 VSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTEL 244 (394)
T ss_dssp EECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEECTTCCEE
T ss_pred EecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEEECCCceec
Confidence 8887553 3344556778888888888765 44333455666666666665544321 11
Q ss_pred CcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCC
Q 035786 206 IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPT 285 (693)
Q Consensus 206 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~ 285 (693)
-...+..+.+|+.+.+..+..+ .....|..+..++.+....+.+ ....|..+.+|+.+.+.++ ++ .|++..|.+
T Consensus 245 ~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~ 318 (394)
T 4fs7_A 245 GKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VK-FIGEEAFES 318 (394)
T ss_dssp CSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CC-EECTTTTTT
T ss_pred ccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-cc-eechhhhcC
Confidence 1123445555666665554332 3344556666666666555432 2345777888888888765 43 577778899
Q ss_pred CCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCC
Q 035786 286 LDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNN 346 (693)
Q Consensus 286 l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N 346 (693)
+.+|+.+++.++ ++..-..+|..+.+|+.+++..| ++ .++...+..+.+|+.+++..+
T Consensus 319 c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 319 CTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG
T ss_pred CCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC
Confidence 999999999754 66555677888999999999877 55 566666777788888877655
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.77 E-value=4.4e-10 Score=113.49 Aligned_cols=20 Identities=10% Similarity=-0.139 Sum_probs=13.2
Q ss_pred CCCCcceeecC-C-CEeEEEcCC
Q 035786 51 CRSWRGVQCQN-G-QVIAINISG 71 (693)
Q Consensus 51 C~~W~gv~C~~-~-~v~~l~l~~ 71 (693)
| +|.|+.|+. + +|+.+..++
T Consensus 78 ~-~~~g~i~~~~~~ki~~~v~~~ 99 (267)
T 3rw6_A 78 K-AVNYKILDRENRRISIIINSS 99 (267)
T ss_dssp H-HTTSSCBCTTSCBCCCEEEEC
T ss_pred H-hcCcEEECCCCCEEEEEEecC
Confidence 5 799999973 3 565554443
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.67 E-value=9.4e-07 Score=95.01 Aligned_cols=262 Identities=12% Similarity=0.130 Sum_probs=119.8
Q ss_pred CCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCC---CCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCE
Q 035786 94 LLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCS---LSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSN 170 (693)
Q Consensus 94 ~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~---l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 170 (693)
.|+.+.+..+ + ..|.+.-..++++|+.+.+..|. ++..-..+|.++.+|+.+.+..+ ++..-...|..+.+|+.
T Consensus 65 ~L~sI~iP~s-v-t~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~ 141 (394)
T 4gt6_A 65 VLTSVQIPDT-V-TEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDT 141 (394)
T ss_dssp CCCEEEECTT-C-CEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCE
T ss_pred cCEEEEECCC-e-eEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccc
Confidence 3666665432 1 23333322346777777776553 44333456666666766666543 33333445666666666
Q ss_pred EEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCC--
Q 035786 171 LDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKN-- 248 (693)
Q Consensus 171 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N-- 248 (693)
+.+..+ +...-...+..+.+|+.+.+..+ ++ .+........+|+.+.+..+-. ..-...|.++.+|.......+
T Consensus 142 i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~-~I~~~aF~~~~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~ 217 (394)
T 4gt6_A 142 VTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VT-AIEERAFTGTALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESY 217 (394)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCCCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSS
T ss_pred ccccce-eeeecccceecccccccccccce-ee-EeccccccccceeEEEECCccc-ccccchhhhccccceeccccccc
Confidence 666543 22223344555555665555433 11 1111111223344444332211 111122222222222221111
Q ss_pred ----------------------------------cCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEc
Q 035786 249 ----------------------------------SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDL 294 (693)
Q Consensus 249 ----------------------------------~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~L 294 (693)
.++..-...|.++.+|+.+.+.++.. .+....|.+++.|+.+.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~--~I~~~aF~~c~~L~~i~l 295 (394)
T 4gt6_A 218 PAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVV--SIGTGAFMNCPALQDIEF 295 (394)
T ss_dssp CBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCC--EECTTTTTTCTTCCEEEC
T ss_pred ccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccc--eecCcccccccccccccC
Confidence 11111123455555666666554432 244455556666666666
Q ss_pred cCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCC---CCCCCCCEEEccCCc
Q 035786 295 SGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS---SSFRKFSLIDLSSNY 369 (693)
Q Consensus 295 s~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~---~~~~~l~~ldLs~N~ 369 (693)
. +.++..-...|..+.+|+.++|..+ ++ .|....+..+.+|+.+.+..+ +. .|.. ..+.+|+.+++++|.
T Consensus 296 ~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 296 S-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp C-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCH
T ss_pred C-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCce
Confidence 4 3344333444555566666666543 32 344444555566666665443 21 1222 334556666666554
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.50 E-value=2e-06 Score=92.44 Aligned_cols=272 Identities=11% Similarity=0.081 Sum_probs=157.3
Q ss_pred cccccCCCCCEEEccCCCC--CCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCC
Q 035786 87 DSLGNLTLLSSFNASGLSL--PGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGE 164 (693)
Q Consensus 87 ~~l~~L~~L~~L~ls~~~l--~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 164 (693)
..+.++++|+.+.+..+.- ...|++.-...+.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.+
T Consensus 81 ~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~ 158 (394)
T 4gt6_A 81 NAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSY 158 (394)
T ss_dssp TTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred HHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceec
Confidence 3567888999988865421 12344333334667776666543 44344556777788888877643 33344456677
Q ss_pred CCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccC---------------------
Q 035786 165 LKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSD--------------------- 223 (693)
Q Consensus 165 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~--------------------- 223 (693)
+.+|+.+.+..+ ++..-..+|. ..+|+.+.+..+... .-...+..+.+|+......
T Consensus 159 c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T 4gt6_A 159 CYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYAL 235 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEE
T ss_pred ccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccceecccccccccccceeecccccccccc
Confidence 777777777654 2212222232 244555555432211 1122233333333322211
Q ss_pred ---------------CcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCC
Q 035786 224 ---------------NALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQ 288 (693)
Q Consensus 224 ---------------N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~ 288 (693)
+.++..-...|.++..|+.+.+..+..+ .-...|.++++|+.+.+.. .++ .|+...|.++.+
T Consensus 236 ~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~-~I~~~aF~~c~~ 312 (394)
T 4gt6_A 236 IRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RIT-ELPESVFAGCIS 312 (394)
T ss_dssp EECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCC-EECTTTTTTCTT
T ss_pred cccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCcccccccccccccCCC-ccc-ccCceeecCCCC
Confidence 1122222346778888998888765443 4456788888899888863 344 577788888999
Q ss_pred CCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCC
Q 035786 289 LQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSN 368 (693)
Q Consensus 289 L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N 368 (693)
|+.+++..+ ++..-...|..+.+|+.+.+..+ ++ .|+...+..+.+|+.+++.+|..... .......|+.+.+..|
T Consensus 313 L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~~~~-~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 313 LKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRSQWN-AISTDSGLQNLPVAPG 388 (394)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHHHHH-TCBCCCCC--------
T ss_pred cCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCceeehh-hhhccCCCCEEEeCCC
Confidence 999999765 55455667888899999999755 54 56667778888999999988765321 1133456777777666
Q ss_pred cc
Q 035786 369 YF 370 (693)
Q Consensus 369 ~l 370 (693)
.+
T Consensus 389 ~~ 390 (394)
T 4gt6_A 389 SI 390 (394)
T ss_dssp --
T ss_pred CE
Confidence 54
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.41 E-value=2e-08 Score=101.36 Aligned_cols=78 Identities=28% Similarity=0.330 Sum_probs=35.4
Q ss_pred CcCCCeeecccccCCC--cCcccccCCCCCCEEEccCCcccccCCccccCCC--CCCEEEccCCcCcccCc-------hh
Q 035786 189 LGNLTRLNLASNFFTG--QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLD--KLIELDLSKNSISGSLP-------LE 257 (693)
Q Consensus 189 l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~Ls~N~l~g~~p-------~~ 257 (693)
+++|+.|+|++|.+++ .+|..+..+++|+.|+|++|++++. ..+..+. +|++|+|++|.+++.+| ..
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHH
Confidence 3444444444444443 2233334444444444444444432 1222222 55666666666655443 22
Q ss_pred hhcCccccccc
Q 035786 258 LRGLRNLAKLV 268 (693)
Q Consensus 258 ~~~l~~L~~L~ 268 (693)
+..+++|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 44555555554
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.41 E-value=5.3e-08 Score=93.15 Aligned_cols=89 Identities=16% Similarity=0.221 Sum_probs=39.3
Q ss_pred CCCCCCCEEEccCCCCCCc----CchhhhcCcCCCeeecccccCCCc----CcccccCCCCCCEEEc--cCCccccc---
Q 035786 163 GELKKLSNLDLSRNLLTGE----IPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNL--SDNALTGF--- 229 (693)
Q Consensus 163 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L--s~N~l~g~--- 229 (693)
...++|++|+|++|.+... +...+...++|++|+|++|.++.. +...+...++|++|+| ++|.++..
T Consensus 62 ~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~ 141 (185)
T 1io0_A 62 KTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEM 141 (185)
T ss_dssp TTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH
T ss_pred HhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHH
Confidence 3344455555555544421 222333334455555555544421 2233344445555555 44554432
Q ss_pred -CCccccCCCCCCEEEccCCcCc
Q 035786 230 -IPSEVGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 230 -~p~~~~~l~~L~~L~Ls~N~l~ 251 (693)
+...+...++|++|+|++|.+.
T Consensus 142 ~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 142 EIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCcCEEeccCCCCC
Confidence 1222333455555555555543
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.39 E-value=4.5e-07 Score=93.82 Aligned_cols=137 Identities=16% Similarity=0.162 Sum_probs=94.4
Q ss_pred cCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCCc--cceeEEEEcCC--CeeEEEEccCC
Q 035786 517 TNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HARL--VPLLGQCLEHE--TEKLLVYKYMV 591 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~ni--v~l~g~~~~~~--~~~~lv~ey~~ 591 (693)
.+.++.|.+..||+.. ..++||.-... .....+.+|.+++..+. +..+ .+.++++...+ ...|+||||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 3468999999999863 56888875432 22457889999998884 4333 34443322111 12479999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc-------------------------------------
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH------------------------------------- 634 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~------------------------------------- 634 (693)
+.++.+... ..++..++..++.++++.++.||.
T Consensus 100 G~~l~~~~~----------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 100 GVPLTPLLL----------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp CEECCHHHH----------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred CeECCcccc----------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 988865322 125666677777777777777774
Q ss_pred ------------------CCCCCeEecCCCCCCeeeCC--CCceEECCcccccc
Q 035786 635 ------------------ECNPPLVHRDVQASSILLDD--KFEVRLGSLSELHA 668 (693)
Q Consensus 635 ------------------~~~p~iiHrDlk~~NILld~--~~~~ki~Dfgla~~ 668 (693)
...+.++|+|+++.||++++ ...+.|.||+.+..
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 11246899999999999998 45688999998766
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.35 E-value=8.8e-08 Score=91.58 Aligned_cols=116 Identities=13% Similarity=0.136 Sum_probs=75.2
Q ss_pred ccccCCCCCCCEEEccCC-CCCCc----CchhhhcCcCCCeeecccccCCCc----CcccccCCCCCCEEEccCCccccc
Q 035786 159 PATLGELKKLSNLDLSRN-LLTGE----IPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNALTGF 229 (693)
Q Consensus 159 p~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~ 229 (693)
...+...++|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.++..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 345667788888888888 77642 344556677888888888888642 333445567788888888887643
Q ss_pred ----CCccccCCCCCCEEEc--cCCcCcccC----chhhhcCccccccccccccc
Q 035786 230 ----IPSEVGNLDKLIELDL--SKNSISGSL----PLELRGLRNLAKLVISENGL 274 (693)
Q Consensus 230 ----~p~~~~~l~~L~~L~L--s~N~l~g~~----p~~~~~l~~L~~L~Ls~N~l 274 (693)
+...+...++|++|+| ++|.++..- ...+...++|++|+|++|.+
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 3445666677888888 677776432 23334445555555555554
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=2.5e-06 Score=88.33 Aligned_cols=136 Identities=12% Similarity=0.085 Sum_probs=88.6
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCC---CccceeEEEEcCCCeeEEEEccCCCCC
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHA---RLVPLLGQCLEHETEKLLVYKYMVCGD 594 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~---niv~l~g~~~~~~~~~~lv~ey~~~Gs 594 (693)
..++.|....||+. |..++||.-. .......+.+|.++|..+++. .+.+.++++....+..++||||+++..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 45788888899988 5678888742 122245788999999999753 255666666433456789999999988
Q ss_pred hhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc----------------------------------------
Q 035786 595 LASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH---------------------------------------- 634 (693)
Q Consensus 595 L~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~---------------------------------------- 634 (693)
+.+.... .++..++..++.++++.|+.||.
T Consensus 100 l~~~~~~----------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 100 LGEDGMA----------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CHHHHHT----------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred Cchhhhh----------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 7652110 12222223333333333333322
Q ss_pred -----------------CCCCCeEecCCCCCCeeeCC---CCc-eEECCcccccc
Q 035786 635 -----------------ECNPPLVHRDVQASSILLDD---KFE-VRLGSLSELHA 668 (693)
Q Consensus 635 -----------------~~~p~iiHrDlk~~NILld~---~~~-~ki~Dfgla~~ 668 (693)
...+.++|+|+++.||+++. ++. ..|.||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 13446899999999999997 455 48999998766
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=98.14 E-value=9.9e-05 Score=78.52 Aligned_cols=245 Identities=9% Similarity=0.027 Sum_probs=117.9
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 167 (693)
.+.++++|+.+++..+ + ..|++...... +|+.+.+..+ ++..-...|.+ .+|+.+.+..+ +...-...|.+. +
T Consensus 64 aF~~C~~L~~I~lp~~-v-~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~-~~~i~~~~F~~~-~ 136 (379)
T 4h09_A 64 NFNSCYNMTKVTVAST-V-TSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGA-TTEIGNYIFYNS-S 136 (379)
T ss_dssp TTTTCTTCCEEEECTT-C-CEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-C
T ss_pred HhhCCCCCCEEEeCCc-c-eEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCc-cccccccccccc-e
Confidence 4556666666666532 2 23433322223 4555555432 33222334443 35666666543 221222233332 3
Q ss_pred CCEEEccCCCCCCcCchhhhcCcCCCeeecccccCC------------CcCcccccCCCCCCEEEccCCcccccCCcccc
Q 035786 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFT------------GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG 235 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~------------g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 235 (693)
|+.+.+..+ ++..-...+..+.+++.+.+..+... ......+....++..+.+..+. .......+.
T Consensus 137 l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~ 214 (379)
T 4h09_A 137 VKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGFS 214 (379)
T ss_dssp CCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CEECTTTTT
T ss_pred eeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccce-eEEeecccc
Confidence 444444332 22222344556666666655543221 1112223334445554443332 222334455
Q ss_pred CCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCE
Q 035786 236 NLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRF 315 (693)
Q Consensus 236 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~ 315 (693)
...+|+.+.+..+ ++......+.++.+|+.+.+..+ ++ .+....|.++.+|+.+.+..+ ++..-...|..+++|+.
T Consensus 215 ~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~ 290 (379)
T 4h09_A 215 YGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTK 290 (379)
T ss_dssp TCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCE
T ss_pred cccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceecccccccccccccc
Confidence 5566666665443 33233445556666666666554 22 345555666666666666443 33333445556666666
Q ss_pred EEccCCcCcccCCccCcCCCCCCcEEEccCC
Q 035786 316 LDLSRNNITGSWPILSTNGNASGAVFNISNN 346 (693)
Q Consensus 316 L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N 346 (693)
+++.++.++ .|+...+..+.+|+.+++.++
T Consensus 291 i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 291 VVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp EEECCTTCC-EECTTTTTTCTTCCEEECCTT
T ss_pred ccccccccc-eehhhhhcCCCCCCEEEcCcc
Confidence 666666665 444455556666666666544
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00023 Score=75.57 Aligned_cols=262 Identities=14% Similarity=0.112 Sum_probs=167.2
Q ss_pred cCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCE
Q 035786 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSN 170 (693)
Q Consensus 91 ~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 170 (693)
.-.+|+.+.+... + ..|++.-..++.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ +...-...|.. .+|+.
T Consensus 44 ~~~~i~~v~ip~~-v-t~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~ 117 (379)
T 4h09_A 44 DRDRISEVRVNSG-I-TSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDD 117 (379)
T ss_dssp GGGGCSEEEECTT-E-EEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSE
T ss_pred cccCCEEEEeCCC-c-cChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCccc
Confidence 3445666655432 1 2355443346899999999754 665556678776 6777777643 44333445554 47999
Q ss_pred EEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccc------------cCCccccCCC
Q 035786 171 LDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTG------------FIPSEVGNLD 238 (693)
Q Consensus 171 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g------------~~p~~~~~l~ 238 (693)
+++..+. +..-...|.+ .+|+.+.+..+ ++..-...+..+.+++.+.+..+.... .....+....
T Consensus 118 i~lp~~~-~~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
T 4h09_A 118 FEFPGAT-TEIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAK 194 (379)
T ss_dssp EECCTTC-CEECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTC
T ss_pred ccCCCcc-cccccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccc
Confidence 9987653 3222333443 35666665543 333344567788888888877654321 1122344455
Q ss_pred CCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEc
Q 035786 239 KLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDL 318 (693)
Q Consensus 239 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~L 318 (693)
.+..+.+..+. .......+....+|+.+.+..+- . .+....|..+..|+.+.+..+ ++..-...+..+.+|+.+.+
T Consensus 195 ~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~~-~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l 270 (379)
T 4h09_A 195 TGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSGV-T-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNF 270 (379)
T ss_dssp CCSEEECCTTC-CEECTTTTTTCSSCSEEECCTTC-C-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccccccccce-eEEeecccccccccceeeeccce-e-EEccccccCCccceEEEcCCC-ccEeCccccceeehhccccc
Confidence 56666554432 22344567777888888886652 2 466667888999999999876 55555667788899999999
Q ss_pred cCCcCcccCCccCcCCCCCCcEEEccCCccceecCC---CCCCCCCEEEccCC
Q 035786 319 SRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNS---SSFRKFSLIDLSSN 368 (693)
Q Consensus 319 s~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~---~~~~~l~~ldLs~N 368 (693)
..+ ++ .++...+..+.+|+.+++.++.+.- |+. ..+.+|+.++|..+
T Consensus 271 ~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~-I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 271 YAK-VK-TVPYLLCSGCSNLTKVVMDNSAIET-LEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp CCC-CS-EECTTTTTTCTTCCEEEECCTTCCE-ECTTTTTTCTTCCEEECCTT
T ss_pred ccc-ce-eccccccccccccccccccccccce-ehhhhhcCCCCCCEEEcCcc
Confidence 765 44 5666677888999999999887753 333 44567899988754
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=1.1e-05 Score=85.31 Aligned_cols=80 Identities=8% Similarity=-0.005 Sum_probs=55.5
Q ss_pred Ccc-ccCCeeeEEEEEeC-------CCcEEEEEEecccc---c-CHHHHHHHHHHHhcCCC---CCccceeEEEEcCC--
Q 035786 518 NLI-KKGHSGDLFKGTLA-------GGTTVVVKKVSLHS---F-KKESYMMELDLFSRVSH---ARLVPLLGQCLEHE-- 580 (693)
Q Consensus 518 ~~i-g~G~~G~Vy~~~~~-------~g~~vavK~l~~~~---~-~~~~f~~Ei~~l~~l~H---~niv~l~g~~~~~~-- 580 (693)
+.| +.|....+|+.... ++..+++|.-.... . ....+.+|++++..++. -.+.++++++.+..
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 88999999998765 26788898765432 1 12457889988888853 24667777764321
Q ss_pred CeeEEEEccCCCCChhh
Q 035786 581 TEKLLVYKYMVCGDLAS 597 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~ 597 (693)
...++||||+++..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 24689999999877654
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=3.2e-05 Score=78.06 Aligned_cols=135 Identities=12% Similarity=0.037 Sum_probs=88.3
Q ss_pred ccccCCee-eEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCeeEEEEccCCCCCh
Q 035786 519 LIKKGHSG-DLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HARLVPLLGQCLEHETEKLLVYKYMVCGDL 595 (693)
Q Consensus 519 ~ig~G~~G-~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~~lv~ey~~~GsL 595 (693)
.+..|..| .||+-... ++..+.||+-... ...++.+|.+.|..+. +--+-++++++.+ ++..++||||+++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRT-PDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEE-CCeEEEEEEeeCCccc
Confidence 35556666 69998764 5678999986432 2456888999988774 3335677887765 4678999999999877
Q ss_pred hhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccC----------------------------------------
Q 035786 596 ASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHE---------------------------------------- 635 (693)
Q Consensus 596 ~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~---------------------------------------- 635 (693)
.+..... ...+..++.++++.|+-||.-
T Consensus 108 ~~~~~~~------------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (272)
T 4gkh_A 108 FQVLEEY------------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP 175 (272)
T ss_dssp HHHHHHC------------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred cccccCC------------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence 6543210 001122333333333333321
Q ss_pred ---------------CCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 636 ---------------CNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 636 ---------------~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
..+.++|+|+.+.||+++++..+-|.||+.+..
T Consensus 176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 122389999999999999887777999988765
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.75 E-value=6.2e-05 Score=78.64 Aligned_cols=147 Identities=14% Similarity=0.202 Sum_probs=81.5
Q ss_pred CccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCC-----CCCcccee-E-EEEcCCCeeEEEEccC
Q 035786 518 NLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-----HARLVPLL-G-QCLEHETEKLLVYKYM 590 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-----H~niv~l~-g-~~~~~~~~~~lv~ey~ 590 (693)
..|+.|..+.||+....+| .+++|+.... .++...|.+++..++ .|.++.-. | ++...++..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 3466677899999987655 4889988642 233444555554442 34444310 1 1111134678999999
Q ss_pred CCCChh--------------hhhhccCCCC---CC---CCCCCCHHHHHH------------------------------
Q 035786 591 VCGDLA--------------SSLHRVTDLE---DD---SLQSLDWITRLK------------------------------ 620 (693)
Q Consensus 591 ~~GsL~--------------~~l~~~~~~~---~~---~~~~l~~~~r~~------------------------------ 620 (693)
++..+. ..+|...... .. ....-.|.....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 987653 1223211100 00 011234543211
Q ss_pred -HHHHHHHHHhhhcc----------CCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 621 -IAIGAAEGLSYLHH----------ECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 621 -ia~~ia~gl~yLH~----------~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
+...+.+++++|+. ...+.++|+|+++.||+++.+..+.|.||+.+..
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 11123345667763 1245899999999999998888899999998754
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00013 Score=78.10 Aligned_cols=74 Identities=12% Similarity=0.101 Sum_probs=49.1
Q ss_pred cCccccCCeeeEEEEEeC-CCcEEEEEEecccc--------cCHHHHHHHHHHHhcCCC--CCcc-ceeEEEEcCCCeeE
Q 035786 517 TNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS--------FKKESYMMELDLFSRVSH--ARLV-PLLGQCLEHETEKL 584 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~--------~~~~~f~~Ei~~l~~l~H--~niv-~l~g~~~~~~~~~~ 584 (693)
.+.||.|.++.||+++.. +++.|+||...... ...+.+..|.+++..++. +..| +++.+ +. ...+
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~-~~~~ 111 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DT-EMAV 111 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ET-TTTE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cC-CccE
Confidence 457899999999999864 46889999764321 123457789999887743 3444 45433 32 3568
Q ss_pred EEEccCCCC
Q 035786 585 LVYKYMVCG 593 (693)
Q Consensus 585 lv~ey~~~G 593 (693)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999864
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00044 Score=70.49 Aligned_cols=78 Identities=14% Similarity=0.166 Sum_probs=55.7
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCC---CccceeEEEEcCCCeeEEEEcc
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHA---RLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~---niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.....+|.|..+.||+.++.||+.|.||+-...... ...|.+|.+.|..+.-. -+.+.++ .+ ..++||||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~--~~---~~~lv~e~ 91 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAG--WD---DRTLAMEW 91 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEE--EE---TTEEEEEC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEe--cc---CceEEEEe
Confidence 3445678999999999999999999999986543322 34688899998887422 2344443 32 24789999
Q ss_pred CCCCChh
Q 035786 590 MVCGDLA 596 (693)
Q Consensus 590 ~~~GsL~ 596 (693)
++.+...
T Consensus 92 l~~~~~~ 98 (288)
T 3f7w_A 92 VDERPPT 98 (288)
T ss_dssp CCCCCCC
T ss_pred ecccCCC
Confidence 9877643
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.47 E-value=4e-05 Score=71.71 Aligned_cols=82 Identities=16% Similarity=0.146 Sum_probs=39.6
Q ss_pred CccEEEecCCCCCcCCCcccCCCccCCEEecccCc-CCccCccccCCC----CCCCEEEccCCC-CCCcCchhhhcCcCC
Q 035786 119 ALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNS-LAGNVPATLGEL----KKLSNLDLSRNL-LTGEIPNAISLLGNL 192 (693)
Q Consensus 119 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 192 (693)
.|+.|||++|.++..--..+.++++|+.|+|++|. ++..--..+..+ ++|++|+|++|. +|..-=..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 56777777766654333344556666666666653 332222223332 245555555543 442211233444455
Q ss_pred Ceeecccc
Q 035786 193 TRLNLASN 200 (693)
Q Consensus 193 ~~L~Ls~N 200 (693)
++|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555444
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.45 E-value=6.2e-05 Score=70.41 Aligned_cols=83 Identities=13% Similarity=0.155 Sum_probs=47.4
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCC-CCCcCchhhhcC----cCCCeeeccccc-CCCcCcccccCCCC
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL-LTGEIPNAISLL----GNLTRLNLASNF-FTGQIPSGLYSLSS 215 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 215 (693)
-+|+.|||+++.++..--..+.++++|++|+|++|. ++..-=..+..+ ++|++|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 368888888888765544556778888888888874 553322233332 256666666653 44321122334445
Q ss_pred CCEEEccCC
Q 035786 216 IQFLNLSDN 224 (693)
Q Consensus 216 L~~L~Ls~N 224 (693)
|+.|+++++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555554444
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0021 Score=66.17 Aligned_cols=144 Identities=13% Similarity=0.150 Sum_probs=93.0
Q ss_pred ccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCC---CCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 516 ETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVS---HARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
....|+.|.+..+|+... ++..++||.-... ....|.+|.+.|..+. ...+.+.++++.. ++..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-QGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-SSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-CCceEEEEEeccC
Confidence 345689999999999986 4667888976532 2556888998888874 2557788887754 3578999999999
Q ss_pred CChhh-----------hhhccCCCCCCC--------------CCCCCHHHHH---HH--HHH--------------HH-H
Q 035786 593 GDLAS-----------SLHRVTDLEDDS--------------LQSLDWITRL---KI--AIG--------------AA-E 627 (693)
Q Consensus 593 GsL~~-----------~l~~~~~~~~~~--------------~~~l~~~~r~---~i--a~~--------------ia-~ 627 (693)
..+.. -||........+ .-.-+|.... ++ ..+ +. +
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 87532 334322100000 0012575432 11 111 11 1
Q ss_pred HHhhhc-cCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 628 GLSYLH-HECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 628 gl~yLH-~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
-...|. ....|.+||+|+.+.||+++.++ +.|.|+.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123343 23467899999999999999887 8899984
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0015 Score=70.45 Aligned_cols=72 Identities=11% Similarity=0.073 Sum_probs=44.1
Q ss_pred cCccccCCeeeEEEEEeCCCcEEEEEEecc-------c-cc--CHHHHHHHHHHHh-cCCCCCccceeEEEEcCCCeeEE
Q 035786 517 TNLIKKGHSGDLFKGTLAGGTTVVVKKVSL-------H-SF--KKESYMMELDLFS-RVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~-------~-~~--~~~~f~~Ei~~l~-~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.+.+|.|....||+... ++..++||.... . .. .+..+..|+..+. ...+..+.+++++. +...++
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~---~~~~~l 114 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD---RTMALI 114 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE---TTTTEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC---CCccEE
Confidence 45689999999999975 467899994321 1 11 2333444443332 22234456666544 346789
Q ss_pred EEccC-CC
Q 035786 586 VYKYM-VC 592 (693)
Q Consensus 586 v~ey~-~~ 592 (693)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00089 Score=69.25 Aligned_cols=166 Identities=11% Similarity=0.062 Sum_probs=90.4
Q ss_pred ccCHHHHHHHhCCCCc-----cCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCC--cccee
Q 035786 501 SFTYEQLLRATGNFSE-----TNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHAR--LVPLL 573 (693)
Q Consensus 501 ~~~~~~l~~at~~~~~-----~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~n--iv~l~ 573 (693)
.++.+++......|.. .+.|+.|....+|+....+| .+++|..... ...+++..|++++..++... +.+++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 4566676666665654 23466788889999987766 6788887642 12334666777777664222 22332
Q ss_pred EE-----EEcCCCeeEEEEccCCCCChhh--------------hhhccCCCCCCC----CCCCCHHHHHHHH--------
Q 035786 574 GQ-----CLEHETEKLLVYKYMVCGDLAS--------------SLHRVTDLEDDS----LQSLDWITRLKIA-------- 622 (693)
Q Consensus 574 g~-----~~~~~~~~~lv~ey~~~GsL~~--------------~l~~~~~~~~~~----~~~l~~~~r~~ia-------- 622 (693)
.. +...++..++|+||+++..+.. -+|......... .....|..+..-+
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 11 0011245689999999865432 123211100000 0112354422111
Q ss_pred ----HHHHHHHhhhccC----CCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 623 ----IGAAEGLSYLHHE----CNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 623 ----~~ia~gl~yLH~~----~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
..+.+.+++++.. ..+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 1133445555421 234689999999999999876668999987654
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0033 Score=65.08 Aligned_cols=147 Identities=12% Similarity=0.101 Sum_probs=82.7
Q ss_pred ccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCC--ccceeEE----EEcCCCeeEEEEccCCC
Q 035786 519 LIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHAR--LVPLLGQ----CLEHETEKLLVYKYMVC 592 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~n--iv~l~g~----~~~~~~~~~lv~ey~~~ 592 (693)
.++ |....||+....+|+.+++|.........+.+..|.+++..++... +.+++.. ....++..++||||+++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 466 7788999988877888999998644334556777888887774222 3444432 00112456789999998
Q ss_pred CChhh--------------hhhccCC-CCCCCCCCCCHHHHH----HH---------------HHHHHHHHhhhcc----
Q 035786 593 GDLAS--------------SLHRVTD-LEDDSLQSLDWITRL----KI---------------AIGAAEGLSYLHH---- 634 (693)
Q Consensus 593 GsL~~--------------~l~~~~~-~~~~~~~~l~~~~r~----~i---------------a~~ia~gl~yLH~---- 634 (693)
..+.. -+|.... .........+|.... .+ ...+.+.++.+..
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 55431 1222111 000011123332210 00 0011111222221
Q ss_pred CCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 635 ECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 635 ~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
...+.++|+|+++.||+++ + .+.|.||+.+..
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1234579999999999999 5 899999987665
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0028 Score=64.93 Aligned_cols=71 Identities=10% Similarity=0.068 Sum_probs=43.3
Q ss_pred cCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCcc-ceeEEEEcCCCeeEEEEccC-CCCC
Q 035786 517 TNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLV-PLLGQCLEHETEKLLVYKYM-VCGD 594 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~~lv~ey~-~~Gs 594 (693)
.+.|+.|....+|+. ..+++|.-........+..+|.+++..++...+. +++++ + ...-++|+||+ ++-+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~-~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--D-PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--C-TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--E-CCCCEEEEeecCCCcc
Confidence 467888999999998 5688887754322211234577777766533343 44443 2 23457899999 5544
Q ss_pred h
Q 035786 595 L 595 (693)
Q Consensus 595 L 595 (693)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0007 Score=64.48 Aligned_cols=89 Identities=18% Similarity=0.235 Sum_probs=40.3
Q ss_pred cCCCCCCCEEEccCCCCCCc----CchhhhcCcCCCeeecccccCCCc----CcccccCCCCCCEEEccCCc---ccc--
Q 035786 162 LGELKKLSNLDLSRNLLTGE----IPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNA---LTG-- 228 (693)
Q Consensus 162 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~---l~g-- 228 (693)
+..-+.|+.|+|++|.+... +...+..-+.|+.|+|++|.++.. +-..+..-+.|+.|+|++|. +..
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g 145 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV 145 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHH
Confidence 33344455555555555421 223333444555555555555421 12223334456666665432 221
Q ss_pred --cCCccccCCCCCCEEEccCCcC
Q 035786 229 --FIPSEVGNLDKLIELDLSKNSI 250 (693)
Q Consensus 229 --~~p~~~~~l~~L~~L~Ls~N~l 250 (693)
.+.+.+..-+.|+.|+++.|.+
T Consensus 146 ~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 146 EMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHHhCCCcCeEeccCCCc
Confidence 1222333445566666665543
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.00068 Score=64.54 Aligned_cols=112 Identities=13% Similarity=0.180 Sum_probs=66.3
Q ss_pred cCCCCCCCEEEccCC-CCCCc----CchhhhcCcCCCeeecccccCCCc----CcccccCCCCCCEEEccCCccccc---
Q 035786 162 LGELKKLSNLDLSRN-LLTGE----IPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNALTGF--- 229 (693)
Q Consensus 162 ~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~--- 229 (693)
+.+-+.|++|+|++| .+... +-..+..-+.|+.|+|++|.+... +-..+..-+.|+.|+|+.|.|+..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 345567778888775 66422 344556667888888888888632 233344557788888888887642
Q ss_pred -CCccccCCCCCCEEEccCC---cCccc----CchhhhcCcccccccccccc
Q 035786 230 -IPSEVGNLDKLIELDLSKN---SISGS----LPLELRGLRNLAKLVISENG 273 (693)
Q Consensus 230 -~p~~~~~l~~L~~L~Ls~N---~l~g~----~p~~~~~l~~L~~L~Ls~N~ 273 (693)
+-+.+..-+.|++|+|++| .+... +...+..-+.|+.|+++.|.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 2234455566888888754 23321 22334444555555555443
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.012 Score=60.96 Aligned_cols=145 Identities=14% Similarity=0.065 Sum_probs=72.2
Q ss_pred ccccCCeee-EEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCC--CccceeEEEEcCCCeeEEEEccCCCCCh
Q 035786 519 LIKKGHSGD-LFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHA--RLVPLLGQCLEHETEKLLVYKYMVCGDL 595 (693)
Q Consensus 519 ~ig~G~~G~-Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~--niv~l~g~~~~~~~~~~lv~ey~~~GsL 595 (693)
.++.|.... +|+.+..+|..+++|...... .+++..|++++..++.. .+.+++.++. +. -++|||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~--~~-g~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEH--AR-GLLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEET--TT-TEEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecC--CC-CEEEEeeCCCcch
Confidence 455554444 678776556777777654322 12344566666665422 2445665532 22 3789999987666
Q ss_pred hhhhhccCC------------------CCCCCCCCCCHH----------H-----HH-----HHHHHHHHHHhhhc---c
Q 035786 596 ASSLHRVTD------------------LEDDSLQSLDWI----------T-----RL-----KIAIGAAEGLSYLH---H 634 (693)
Q Consensus 596 ~~~l~~~~~------------------~~~~~~~~l~~~----------~-----r~-----~ia~~ia~gl~yLH---~ 634 (693)
.+++..... .........+.. . ++ .....+.+.++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 554432100 000000011111 0 00 00001111222221 1
Q ss_pred CCCCCeEecCCCCCCeeeCCC----CceEECCcccccc
Q 035786 635 ECNPPLVHRDVQASSILLDDK----FEVRLGSLSELHA 668 (693)
Q Consensus 635 ~~~p~iiHrDlk~~NILld~~----~~~ki~Dfgla~~ 668 (693)
...+.++|+|+.+.||+++.+ ..+.|.||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 123479999999999999875 6789999988765
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0061 Score=65.80 Aligned_cols=72 Identities=22% Similarity=0.202 Sum_probs=49.0
Q ss_pred CccccCCeeeEEEEEeCC--------CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCc-cceeEEEEcCCCeeEEEEc
Q 035786 518 NLIKKGHSGDLFKGTLAG--------GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARL-VPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~--------g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~lv~e 588 (693)
+.|+.|-...||+...++ +..|.+|+.... ...+.+.+|.+++..+...++ .++++.+ . + .+|||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~-~--~--g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIF-S--G--GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEE-T--T--EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEe-C--C--CEEEE
Confidence 457788889999999763 468889887321 112567789999888854444 4566543 2 2 38999
Q ss_pred cCCCCCh
Q 035786 589 YMVCGDL 595 (693)
Q Consensus 589 y~~~GsL 595 (693)
|+++.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986444
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0062 Score=53.91 Aligned_cols=35 Identities=31% Similarity=0.376 Sum_probs=17.7
Q ss_pred CCEEecccCcCCccCccccCCCCCCCEEEccCCCC
Q 035786 144 LNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLL 178 (693)
Q Consensus 144 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 178 (693)
|++|+|++|+|+...+..|..+++|++|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444443344455555555555555554
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0094 Score=52.75 Aligned_cols=36 Identities=28% Similarity=0.311 Sum_probs=20.2
Q ss_pred CCCEEEccCCCCCCcCchhhhcCcCCCeeecccccC
Q 035786 167 KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFF 202 (693)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 202 (693)
+|++|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 455666666666544444455555666666665554
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.015 Score=63.15 Aligned_cols=73 Identities=10% Similarity=0.001 Sum_probs=46.9
Q ss_pred CccccCCeeeEEEEEeCC-CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCcc-ceeEEEEcCCCeeEEEEccCCCCCh
Q 035786 518 NLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLV-PLLGQCLEHETEKLLVYKYMVCGDL 595 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~~lv~ey~~~GsL 595 (693)
..|+.|-...+|+....+ +..+++|.........-+-.+|.+++..+...+++ ++++++ . + .+||||+++..|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~-~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF-T--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE-T--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe-C--C--eEEEEeeCCccC
Confidence 457888889999999875 57888887643321111124788888888765554 566544 2 2 259999997555
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=95.91 E-value=0.0071 Score=63.81 Aligned_cols=73 Identities=18% Similarity=0.245 Sum_probs=43.1
Q ss_pred CccccCCeeeEEEEEeCC---------CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCcc-ceeEEEEcCCCeeEEEE
Q 035786 518 NLIKKGHSGDLFKGTLAG---------GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLV-PLLGQCLEHETEKLLVY 587 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~---------g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~~lv~ 587 (693)
..++.|..-.+|+....+ +..+++|.-........+...|.+++..+....++ ++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~---~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N---GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T---TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C---CcEEE
Confidence 356778888999998764 26788887644322111235688888777544444 555432 2 26899
Q ss_pred ccCCCCCh
Q 035786 588 KYMVCGDL 595 (693)
Q Consensus 588 ey~~~GsL 595 (693)
||+++..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99997544
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=95.77 E-value=0.027 Score=59.51 Aligned_cols=142 Identities=17% Similarity=0.158 Sum_probs=80.2
Q ss_pred ccccCCeeeEEEEEeCC--------CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCc-cceeEEEEcCCCeeEEEEcc
Q 035786 519 LIKKGHSGDLFKGTLAG--------GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARL-VPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 519 ~ig~G~~G~Vy~~~~~~--------g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~lv~ey 589 (693)
.+..|-...+|+.+.++ +..|.+|+-...........+|.++++.+.-..+ .++++++ . + -+||||
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~--~-~--g~v~e~ 131 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVF--P-E--GRLEQY 131 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEE--T-T--EEEEEC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEc--C-C--ccEEEE
Confidence 46667778899998753 4689999864322335567789999887753333 4555443 2 2 289999
Q ss_pred CCCCChhhh-----------------hhccCCCCCCCCCCCC--HHHHHHHHHHHH-------------------HHHhh
Q 035786 590 MVCGDLASS-----------------LHRVTDLEDDSLQSLD--WITRLKIAIGAA-------------------EGLSY 631 (693)
Q Consensus 590 ~~~GsL~~~-----------------l~~~~~~~~~~~~~l~--~~~r~~ia~~ia-------------------~gl~y 631 (693)
+++..|..- ||..... ...... |.+..++..++. +.+..
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~---~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMP---FTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCS---SCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCC---CCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 998665421 1211110 011223 333333332221 11222
Q ss_pred h----cc-CCCCCeEecCCCCCCeeeCCC----CceEECCcccccc
Q 035786 632 L----HH-ECNPPLVHRDVQASSILLDDK----FEVRLGSLSELHA 668 (693)
Q Consensus 632 L----H~-~~~p~iiHrDlk~~NILld~~----~~~ki~Dfgla~~ 668 (693)
| .. .....++|+|+.+.||+++++ ..+.|.||..+..
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 21 223468999999999999876 7899999987664
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=94.11 E-value=0.16 Score=52.61 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=27.8
Q ss_pred CCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 637 NPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 637 ~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
.+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35799999999999999888899999977655
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=92.56 E-value=0.14 Score=54.86 Aligned_cols=73 Identities=16% Similarity=0.211 Sum_probs=46.3
Q ss_pred CccccCCeeeEEEEEeCC--------CcEEEEEEecccccCHHHHHHHHHHHhcCCCCCc-cceeEEEEcCCCeeEEEEc
Q 035786 518 NLIKKGHSGDLFKGTLAG--------GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARL-VPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~--------g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~~lv~e 588 (693)
+.+..|-...+|+...++ +..+++|+-.......-+-.+|.+++..+.-..+ .++++.+ . -++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~---~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P---EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T---TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C---CCEEEE
Confidence 346667788999998763 5788888864432221123468888877753334 3444422 2 278999
Q ss_pred cCCCCCh
Q 035786 589 YMVCGDL 595 (693)
Q Consensus 589 y~~~GsL 595 (693)
|+++..|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998664
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.45 E-value=0.25 Score=34.10 Aligned_cols=26 Identities=27% Similarity=0.511 Sum_probs=14.1
Q ss_pred eeehhhHhHHHHHHHHHHHHHHHhhh
Q 035786 438 FILVGVFGGLGFIAILVIVLVLILRR 463 (693)
Q Consensus 438 ~i~~~~~~~~~~~~~~~~~~~~~~~~ 463 (693)
.|+++++++++++++++..+++++||
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhh
Confidence 35666666666555555444444443
|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.05 E-value=0.2 Score=34.43 Aligned_cols=26 Identities=35% Similarity=0.660 Sum_probs=13.7
Q ss_pred eeehhhHhHHHHHHHHHHHHHHHhhh
Q 035786 438 FILVGVFGGLGFIAILVIVLVLILRR 463 (693)
Q Consensus 438 ~i~~~~~~~~~~~~~~~~~~~~~~~~ 463 (693)
.|+++++++++++++++..+++++||
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RR 36 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRR 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhh
Confidence 35566666665555554444444443
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=86.81 E-value=0.081 Score=57.48 Aligned_cols=57 Identities=7% Similarity=-0.038 Sum_probs=16.6
Q ss_pred CccccCCeeeEEEEEeCC-CcEEEE------EEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEE
Q 035786 518 NLIKKGHSGDLFKGTLAG-GTTVVV------KKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCL 577 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~-g~~vav------K~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~ 577 (693)
+.+| ||.||+|.+.. ..+||| |+...+... ..+|.+|..++.+.+|||+++..++..
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3465 99999999864 368999 776543322 346899999999999999999988764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 693 | ||||
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 5e-24 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 4e-22 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 6e-22 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 4e-21 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-21 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 5e-21 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-21 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 8e-17 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 7e-16 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-06 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-06 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-05 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 9e-05 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 8e-21 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-20 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-20 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-20 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 4e-20 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 5e-20 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 7e-19 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 8e-19 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 8e-19 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 9e-19 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 4e-18 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 4e-18 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-17 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-17 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 4e-17 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 4e-17 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 7e-17 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 3e-10 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-06 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 8e-17 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 8e-17 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-16 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-16 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-16 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 5e-16 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 9e-16 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 2e-15 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-15 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 3e-15 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 5e-15 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 7e-15 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 8e-15 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 9e-15 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 9e-15 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 3e-14 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 3e-14 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-14 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 6e-14 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 7e-13 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 7e-13 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 8e-13 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-12 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-12 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 3e-12 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 8e-12 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 8e-12 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-11 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-11 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-11 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-11 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 3e-11 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 9e-11 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-10 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-10 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 9e-09 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 5e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 6e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.002 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.002 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 5e-10 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-09 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 4e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 7e-08 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-09 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 1e-08 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 1e-04 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-08 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 8e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.002 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.003 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.003 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 5e-08 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 5e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 5e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-04 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 2e-06 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 3e-05 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 8e-05 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 3e-06 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 3e-06 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 4e-05 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.001 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 1e-05 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 2e-05 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 0.001 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 0.003 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 0.004 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 2e-05 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 1e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 1e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 3e-05 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 4e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 6e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.004 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 8e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 3e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 3e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 9e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.001 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.002 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.004 |
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (249), Expect = 5e-24
Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 13/182 (7%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPL 572
+ G G+++ G G T V VK + S ++++ E +L ++ H RLV L
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL 73
Query: 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL 632
+ ++ +YM G L L S L L +A AEG++++
Sbjct: 74 YAVV--TQEPIYIITEYMENGSLVDFLKT------PSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 633 HHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQLYQSCM 690
+HRD++A++IL+ D ++ L+ L + +F + +
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 182
Query: 691 NG 692
N
Sbjct: 183 NY 184
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 95.2 bits (236), Expect = 4e-22
Identities = 40/201 (19%), Positives = 73/201 (36%), Gaps = 28/201 (13%)
Query: 500 DSFTYEQLLRATGNFSET---------NLIKKGHSGDLFKGTLAG----GTTVVVKKVSL 546
D FT+E A F++ +I G G++ G L V +K +
Sbjct: 5 DPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKS 64
Query: 547 HSFKK--ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTD 604
+K ++ E + + H ++ L G T +++ ++M G L S L +
Sbjct: 65 GYTEKQRRDFLSEASIMGQFDHPNVIHLEGVV-TKSTPVMIITEFMENGSLDSFLRQ--- 120
Query: 605 LEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--S 662
+ I + + G A G+ YL VHRD+ A +IL++ ++
Sbjct: 121 ----NDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFG 173
Query: 663 LSELHAQGDSHQNVLTRFLWR 683
LS S + +
Sbjct: 174 LSRFLEDDTSDPTYTSALGGK 194
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.9 bits (233), Expect = 6e-22
Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 11/170 (6%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPL 572
I KG GD+ G G V VK + + + ++ E + +++ H+ LV L
Sbjct: 8 ELKLLQTIGKGEFGDVMLGDYRG-NKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQL 65
Query: 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL 632
LG +E + +V +YM G L L L LK ++ E + YL
Sbjct: 66 LGVIVEEKGGLYIVTEYMAKGSLVDYLRS------RGRSVLGGDCLLKFSLDVCEAMEYL 119
Query: 633 HHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLW 682
VHRD+ A ++L+ + ++ + W
Sbjct: 120 EG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW 166
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.3 bits (226), Expect = 4e-21
Identities = 30/149 (20%), Positives = 61/149 (40%), Gaps = 11/149 (7%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPL 572
+ I G G + G V +K + + +E ++ E ++ ++SH +LV L
Sbjct: 6 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 65
Query: 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL 632
G C + LV+++M G L+ D T L + + EG +
Sbjct: 66 YGVC-LEQAPICLVFEFMEHGCLS-------DYLRTQRGLFAAETLLGMCLDVCEG---M 114
Query: 633 HHECNPPLVHRDVQASSILLDDKFEVRLG 661
+ ++HRD+ A + L+ + +++
Sbjct: 115 AYLEEACVIHRDLAARNCLVGENQVIKVS 143
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.6 bits (227), Expect = 4e-21
Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 13/179 (7%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHAR 568
++ I G G K + G +V K++ S K+ + E++L + H
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64
Query: 569 LVPLLGQCLEHETEKL-LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE 627
+V + ++ L +V +Y GDLAS + + T Q LD L++
Sbjct: 65 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTK----ERQYLDEEFVLRVMTQLTL 120
Query: 628 GLSYLH--HECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLW 682
L H + ++HRD++ +++ LD K V+LG L+ + S +
Sbjct: 121 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPY 179
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 91.7 bits (227), Expect = 5e-21
Identities = 32/179 (17%), Positives = 67/179 (37%), Gaps = 11/179 (6%)
Query: 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVP 571
+ + + + G G++++G TV VK + + + E ++ E + + H LV
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 77
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
LLG C E ++ ++M G+L L Q + + L +A + + Y
Sbjct: 78 LLGVC-TREPPFYIITEFMTYGNLLDYLRECNR------QEVSAVVLLYMATQISSAMEY 130
Query: 632 LHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQSCM 690
L +HRD+ A + L+ + V++ + + +
Sbjct: 131 LEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 186
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 93.1 bits (230), Expect = 6e-21
Identities = 55/249 (22%), Positives = 85/249 (34%), Gaps = 33/249 (13%)
Query: 44 WPLRTEPCRSWRGVQCQNGQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGL 103
L Q + + N + L LT L S A+
Sbjct: 148 SALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNN 207
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+ P L L L L G+ +L+ L L L+ N ++ P L
Sbjct: 208 QISDITPLGIL---TNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LS 260
Query: 164 ELKKLSNLDLSRNLLTGEIP--------------------NAISLLGNLTRLNLASNFFT 203
L KL+ L L N ++ P + IS L NLT L L N +
Sbjct: 261 GLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNIS 320
Query: 204 GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRN 263
P + SL+ +Q L ++N ++ S + NL + L N IS PL L
Sbjct: 321 DISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTPLA--NLTR 374
Query: 264 LAKLVISEN 272
+ +L +++
Sbjct: 375 ITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 80.8 bits (198), Expect = 8e-17
Identities = 57/233 (24%), Positives = 91/233 (39%), Gaps = 47/233 (20%)
Query: 112 WFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNL 171
+L L+ L + +S P + L+ L L+GN L TL L L++L
Sbjct: 191 SVLAKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKD--IGTLASLTNLTDL 246
Query: 172 DLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIP 231
DL+ N ++ P +S L LT L L +N + P L L+++ L L++N
Sbjct: 247 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNEN--QLEDI 300
Query: 232 SEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQV 291
S + NL L L L N+IS P+ +L +LQ
Sbjct: 301 SPISNLKNLTYLTLYFNNISDISPVS---------------------------SLTKLQR 333
Query: 292 VDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPI--------LSTNGNA 336
+ + NK+ ++L N+ +L N I+ P+ L N A
Sbjct: 334 LFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQA 384
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 77.7 bits (190), Expect = 7e-16
Identities = 44/207 (21%), Positives = 78/207 (37%), Gaps = 18/207 (8%)
Query: 163 GELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLS 222
+L L +L + N ++ P I NL L+L N L SL+++ L+L+
Sbjct: 194 AKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKD--IGTLASLTNLTDLDLA 249
Query: 223 DNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGL 282
+N ++ P + L KL EL L N IS PL L L E
Sbjct: 250 NNQISNLAP--LSGLTKLTELKLGANQISNISPL-----AGLTALTNLELNENQLEDISP 302
Query: 283 FPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASG-AVF 341
L L + L N + P + L+ L + N ++ +S+ N +
Sbjct: 303 ISNLKNLTYLTLYFNNISDISPVSSL--TKLQRLFFANNKVSD----VSSLANLTNINWL 356
Query: 342 NISNNMLYGDLNSSSFRKFSLIDLSSN 368
+ +N + ++ + + + L+
Sbjct: 357 SAGHNQISDLTPLANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 47.7 bits (112), Expect = 3e-06
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 165 LKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDN 224
L + L + +T + + L +T L G+ L+++ +N S+N
Sbjct: 21 LAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS--IDGVEYLNNLTQINFSNN 76
Query: 225 ALTGFIPSEVGNLDKLIELDLS 246
LT P + NL KL+++ ++
Sbjct: 77 QLTDITP--LKNLTKLVDILMN 96
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 47.3 bits (111), Expect = 4e-06
Identities = 41/184 (22%), Positives = 68/184 (36%), Gaps = 36/184 (19%)
Query: 189 LGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKN 248
L NL L +N + P G+ + ++ L+L+ N L + +L L +LDL+ N
Sbjct: 196 LTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLKD--IGTLASLTNLTDLDLANN 251
Query: 249 SISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLF 308
IS PL GL L +L + N + + P + +L N+ + +
Sbjct: 252 QISNLAPLS--GLTKLTELKLGANQISN-----ISPLAGLTALTNLELNENQLEDISPIS 304
Query: 309 LRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSN 368
NL +L L NNI+ P+ SS K + ++N
Sbjct: 305 NLKNLTYLTLYFNNISDISPV-------------------------SSLTKLQRLFFANN 339
Query: 369 YFQG 372
Sbjct: 340 KVSD 343
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 44.2 bits (103), Expect = 4e-05
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 6/82 (7%)
Query: 189 LGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKN 248
L + L T + L + L + V L+ L +++ S N
Sbjct: 21 LAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNN 76
Query: 249 SISGSLPLELRGLRNLAKLVIS 270
++ PL+ L L ++++
Sbjct: 77 QLTDITPLK--NLTKLVDILMN 96
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 43.1 bits (100), Expect = 9e-05
Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 16/100 (16%)
Query: 100 ASGLSLPGSIPEWFG-YRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGN---SLA 155
++ ++ I + F L L +++ ++ + +L ++ L S+
Sbjct: 3 SATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIKSID 60
Query: 156 GNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRL 195
G + L L+ ++ S N LT P L NLT+L
Sbjct: 61 G-----VEYLNNLTQINFSNNQLTDITP-----LKNLTKL 90
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.4 bits (226), Expect = 8e-21
Identities = 37/180 (20%), Positives = 69/180 (38%), Gaps = 21/180 (11%)
Query: 520 IKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLE- 578
I KG G++++G G V VK S + E+ + H ++ + +
Sbjct: 11 IGKGRFGEVWRGKWRG-EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 69
Query: 579 --HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC 636
T+ LV Y G L L+R ++ +K+A+ A GL++LH E
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYLNR---------YTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 637 -----NPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDSHQNVLTRFLWRQLYQS 688
P + HRD+++ +IL+ + G + D+ + + Y +
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.4 bits (224), Expect = 1e-20
Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKK---ESYMMELDLFSRVSHAR 568
G + I G G ++KG G V VK +++ + +++ E+ + + H
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
++ +G + +V ++ L LH + + I + IA A+G
Sbjct: 66 ILLFMGYS--TAPQLAIVTQWCEGSSLYHHLHIIE-------TKFEMIKLIDIARQTAQG 116
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
+ YLH ++HRD+++++I L + V++G
Sbjct: 117 MDYLHA---KSIIHRDLKSNNIFLHEDLTVKIG 146
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.9 bits (225), Expect = 1e-20
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 14/152 (9%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARL 569
+F + + + G+ G +FK + G + K + L + + EL + + +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 570 VPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGL 629
V G + E + ++M G L L + + K++I +GL
Sbjct: 67 VGFYGAF-YSDGEISICMEHMDGGSLDQVLKKA--------GRIPEQILGKVSIAVIKGL 117
Query: 630 SYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
+YL + ++HRDV+ S+IL++ + E++L
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLC 147
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 90.1 bits (222), Expect = 2e-20
Identities = 63/284 (22%), Positives = 101/284 (35%), Gaps = 41/284 (14%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+P +P P +LDL++ ++ G F NL L+ L L N ++ P
Sbjct: 24 KVPKDLP-------PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFA 76
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL-----------------------ASN 200
L KL L LS+N L L L
Sbjct: 77 PLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL 136
Query: 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRG 260
+G + + ++ ++D +T G L EL L N I+ L+G
Sbjct: 137 KSSGIENGAFQGMKKLSYIRIADTNITTIPQ---GLPPSLTELHLDGNKITKVDAASLKG 193
Query: 261 LRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSR 320
L NLAKL +S N + G L+ + L+ NKL ++ + L
Sbjct: 194 LNNLAKLGLSFNSISAV-DNGSLANTPHLRELHLNNNKLVKVPGGLADH-KYIQVVYLHN 251
Query: 321 NNITG-----SWPILSTNGNASGAVFNISNNML-YGDLNSSSFR 358
NNI+ P AS + ++ +N + Y ++ S+FR
Sbjct: 252 NNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR 295
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.6 bits (219), Expect = 4e-20
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPL 572
+ + + G G + G G V +K + S ++ ++ E + +SH +LV L
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL 632
G C + ++ +YM G L + L + L++ E + YL
Sbjct: 65 YGVC-TKQRPIFIITEYMANGCLLNYLREMR-------HRFQTQQLLEMCKDVCEAMEYL 116
Query: 633 HHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRF 680
+HRD+ A + L++D+ V++ D
Sbjct: 117 ES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 161
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.6 bits (219), Expect = 5e-20
Identities = 34/178 (19%), Positives = 72/178 (40%), Gaps = 11/178 (6%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPL 572
+ + +G G+++ GT G T V +K + + E+++ E + ++ H +LV L
Sbjct: 18 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 77
Query: 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL 632
E +V +YM G L L ++ + L + +A A G++Y+
Sbjct: 78 YAVV--SEEPIYIVTEYMSKGSLLDFLKG------ETGKYLRLPQLVDMAAQIASGMAYV 129
Query: 633 HHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQSCM 690
VHRD++A++IL+ + ++ D+ + + +
Sbjct: 130 ERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 184
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.0 bits (212), Expect = 7e-19
Identities = 37/186 (19%), Positives = 71/186 (38%), Gaps = 20/186 (10%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAGG---TTVVVKKVSLHSFKK--ESYMMELDLFSRVS-H 566
+ ++I +G+ G + K + +K++ ++ K + EL++ ++ H
Sbjct: 11 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 70
Query: 567 ARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDD--------SLQSLDWITR 618
++ LLG C EH L +Y G+L L + LE D + +L
Sbjct: 71 PNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129
Query: 619 LKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNV 676
L A A G+ + +HRD+ A +IL+ + + ++ LS
Sbjct: 130 LHFAADVARGM---DYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 186
Query: 677 LTRFLW 682
W
Sbjct: 187 RLPVRW 192
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.0 bits (210), Expect = 8e-19
Identities = 33/190 (17%), Positives = 73/190 (38%), Gaps = 17/190 (8%)
Query: 504 YEQLLRATG---NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK-ESYMMEL 558
YE + R + + G G ++K K + S ++ E YM+E+
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 60
Query: 559 DLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITR 618
D+ + H +V LL +E ++ ++ G + + + + + L
Sbjct: 61 DILASCDHPNIVKLLDAF-YYENNLWILIEFCAGGAVDAVMLELE-------RPLTESQI 112
Query: 619 LKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLT 678
+ + L+YLH + ++HRD++A +IL +++L + A+
Sbjct: 113 QVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFG-VSAKNTRTIQRRD 168
Query: 679 RFLWRQLYQS 688
F+ + +
Sbjct: 169 SFIGTPYWMA 178
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 85.4 bits (211), Expect = 8e-19
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 17/153 (11%)
Query: 514 FSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK----ESYMMELDLFSRVSHAR 568
FS+ I G G ++ + V +KK+S + + + E+ ++ H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
+ G C E LV +Y + + L + + GA +G
Sbjct: 77 TIQYRG-CYLREHTAWLVMEYCLGSASDLLEVH--------KKPLQEVEIAAVTHGALQG 127
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
L+YLH ++HRDV+A +ILL + V+LG
Sbjct: 128 LAYLHSH---NMIHRDVKAGNILLSEPGLVKLG 157
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.6 bits (211), Expect = 9e-19
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 18/155 (11%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFKKE--SYMMELDLFSRVSH 566
+F+E +I +GH G ++ GTL VK ++ + E ++ E + SH
Sbjct: 30 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 567 ARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAA 626
++ LLG CL E L+V YM GDL + + + + + A
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLR-------NFIRNETHNPTVKDLIGFGLQVA 140
Query: 627 EGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
+G + + VHRD+ A + +LD+KF V++
Sbjct: 141 KG---MKFLASKKFVHRDLAARNCMLDEKFTVKVA 172
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 83.4 bits (205), Expect = 4e-18
Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 28/173 (16%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSFKK--ESYMMELDLFSRV 564
N I +G G +F+ G T V VK + + + E L +
Sbjct: 14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 73
Query: 565 SHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSL-------------- 610
+ +V LLG L+++YM GDL L ++ SL
Sbjct: 74 DNPNIVKLLG-VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 132
Query: 611 --QSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
L +L IA A G++YL VHRD+ + L+ + V++
Sbjct: 133 GPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIA 182
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.3 bits (205), Expect = 4e-18
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 23/168 (13%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSF--KKESYMMELDLFSRV 564
S + G G + + T G TV VK + + ++E+ M EL + S +
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83
Query: 565 S-HARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTD----------LEDDSLQSL 613
H +V LLG C L++ +Y GDL + L R D + +D +L
Sbjct: 84 GNHMNIVNLLGAC-TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 614 DWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
D L + A+G+++L + +HRD+ A +ILL ++
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKIC 187
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.3 bits (200), Expect = 1e-17
Identities = 33/181 (18%), Positives = 70/181 (38%), Gaps = 21/181 (11%)
Query: 516 ETNLIKKGHSGDLFKGTLAG---GTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARL 569
E + G+ G + KG TV VK + + K+ + E ++ ++ + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 570 VPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGL 629
V ++G C +LV + G L L + + + +++ + G+
Sbjct: 71 VRMIGIC--EAESWMLVMEMAELGPLNKYLQQN--------RHVKDKNIIELVHQVSMGM 120
Query: 630 SYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQLYQ 687
YL VHRD+ A ++LL + ++ LS+ +++ T W +
Sbjct: 121 KYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 177
Query: 688 S 688
+
Sbjct: 178 A 178
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.9 bits (199), Expect = 2e-17
Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 20/184 (10%)
Query: 505 EQLLRATGNFSETNL-IKKGHSGDLFKGTLA---GGTTVVVKKVSLHSFKK--ESYMMEL 558
++L N ++ + G+ G + +G V +K + + K E M E
Sbjct: 1 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 60
Query: 559 DLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITR 618
+ ++ + +V L+G C +LV + G L L + +
Sbjct: 61 QIMHQLDNPYIVRLIGVC--QAEALMLVMEMAGGGPLHKFLVG-------KREEIPVSNV 111
Query: 619 LKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNV 676
++ + G+ YL VHRD+ A ++LL ++ ++ LS+ DS+
Sbjct: 112 AELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 168
Query: 677 LTRF 680
+
Sbjct: 169 RSAG 172
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.2 bits (196), Expect = 4e-17
Identities = 70/270 (25%), Positives = 100/270 (37%), Gaps = 12/270 (4%)
Query: 104 SLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
++P IP A Q + L +S SF L +L+L N LA A
Sbjct: 25 AVPVGIP-------AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFT 77
Query: 164 ELKKLSNLDLSRNLLTGEI-PNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLS 222
L L LDLS N + P LG L L+L P L+++Q+L L
Sbjct: 78 GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 137
Query: 223 DNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGL 282
DNAL +L L L L N IS RGL +L +L++ +N + +
Sbjct: 138 DNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH-VHPHA 196
Query: 283 FPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFN 342
F L +L + L N L L L++L L+ N F
Sbjct: 197 FRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQK--FR 254
Query: 343 ISNNMLYGDLNSSSFRKFSLIDLSSNYFQG 372
S++ + L L L++N QG
Sbjct: 255 GSSSEVPCSL-PQRLAGRDLKRLAANDLQG 283
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.6 bits (196), Expect = 4e-17
Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 17/150 (11%)
Query: 520 IKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFKK---ESYMMELDLFSRVSHARLVPLLGQ 575
I +G ++KG V ++ K + + E ++ + H +V
Sbjct: 17 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDS 76
Query: 576 CLEHETEK---LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL 632
K +LV + M G L + L R + + +GL +L
Sbjct: 77 WESTVKGKKCIVLVTELMTSGTLKTYLKR--------FKVMKIKVLRSWCRQILKGLQFL 128
Query: 633 HHECNPPLVHRDVQASSILLDDK-FEVRLG 661
H PP++HRD++ +I + V++G
Sbjct: 129 H-TRTPPIIHRDLKCDNIFITGPTGSVKIG 157
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 79.8 bits (195), Expect = 7e-17
Identities = 70/309 (22%), Positives = 111/309 (35%), Gaps = 37/309 (11%)
Query: 26 QRSALLDLRSSLGLRS--RDWPLRTEPCR-SWRGVQCQN----GQVIAINISGFKRTRIG 78
+ ALL ++ LG + W T+ C +W GV C +V +++SG +
Sbjct: 7 DKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPY 66
Query: 79 RLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSF 138
+ SL NL L+ G++ +L L L + ++SG+IP
Sbjct: 67 PIPS-----SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL 121
Query: 139 GNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNL------ 192
+ L L S N+L+G +P ++ L L + N ++G IP++ L
Sbjct: 122 SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181
Query: 193 -----------------TRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG 235
S S L+ F +VG
Sbjct: 182 SRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVG 241
Query: 236 NLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLS 295
L LDL N I G+LP L L+ L L +S N L G++ + L + V +
Sbjct: 242 LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ--GGNLQRFDVSAYA 299
Query: 296 GNKLDGALP 304
NK P
Sbjct: 300 NNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 59.8 bits (143), Expect = 3e-10
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 196 NLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255
+L +N G +P GL L + LN+S N L G IP + GNL + + N P
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308
Query: 256 L 256
L
Sbjct: 309 L 309
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 47.8 bits (112), Expect = 2e-06
Identities = 60/298 (20%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 88 SLGNLTLLSSFNASGLSLPGSIPEWFG------YRLPALQVLDLRSCSLSG--SIPGSFG 139
LGN T LSS+ + + W G + + LDL +L IP S
Sbjct: 17 DLGNPTTLSSWLPTTDCCNRT---WLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73
Query: 140 NLSRLNVLYLSGN-SLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA 198
NL LN LY+ G +L G +P + +L +L L ++ ++G IP+ +S + L L+ +
Sbjct: 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFS 133
Query: 199 SNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLEL 258
N +G +P + SL ++ + N ++G IP G+ KL +
Sbjct: 134 YNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRN--------- 184
Query: 259 RGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDL 318
+L+ + PT L + + ++ A++ + +
Sbjct: 185 ------------------RLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKI 226
Query: 319 SRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSS--SFRKFSLIDLSSNYFQGTV 374
+ ++ + + + ++ NN +YG L + +++S N G +
Sbjct: 227 HLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.5 bits (195), Expect = 8e-17
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSFKKE--SYMMELDLFSRV 564
+ + + +G G +++G G T V +K V+ + +E ++ E +
Sbjct: 21 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 80
Query: 565 SHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLH--RVTDLEDDSLQSLDWITRLKIA 622
+ +V LLG L++ + M GDL S L R + L +++A
Sbjct: 81 NCHHVVRLLGVV-SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139
Query: 623 IGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
A+G++YL+ VHRD+ A + ++ + F V++G
Sbjct: 140 GEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 175
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.8 bits (196), Expect = 8e-17
Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 28/173 (16%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHSFK--KESYMMELDLFSRV 564
N ++ G G + T G V VK + + +E+ M EL + +++
Sbjct: 38 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 97
Query: 565 -SHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHR---------------VTDLEDD 608
SH +V LLG C L+++Y GDL + L E++
Sbjct: 98 GSHENIVNLLGAC-TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156
Query: 609 SLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
L L + L A A+G+ +L VHRD+ A ++L+ V++
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKIC 206
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.1 bits (192), Expect = 1e-16
Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 17/154 (11%)
Query: 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKK----ESYMMELDLFSRVSHA 567
+F + KG G+++ + +K + +K E+++ S + H
Sbjct: 7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 66
Query: 568 RLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE 627
++ L G T L+ +Y G + L ++ D A
Sbjct: 67 NILRLYGYF-HDATRVYLILEYAPLGTVYRELQKL--------SKFDEQRTATYITELAN 117
Query: 628 GLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
LSY H + ++HRD++ ++LL E+++
Sbjct: 118 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 148
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.1 bits (194), Expect = 2e-16
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 7/144 (4%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVP 571
++++T +I G G +++ L G V +KKV K EL + ++ H +V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ---DKRFKNRELQIMRKLDHCNIVR 77
Query: 572 LLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSY 631
L +K VY +V + +++RV + Q+L I L+Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 632 LHHECNPPLVHRDVQASSILLDDK 655
+H + HRD++ ++LLD
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPD 158
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.7 bits (191), Expect = 2e-16
Identities = 26/168 (15%), Positives = 60/168 (35%), Gaps = 17/168 (10%)
Query: 512 GNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK--ESYMMELDLFSRVSHAR 568
++ + +G G++ V VK V + E+ E+ + ++H
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
+V G + L +Y G+L + + + G
Sbjct: 65 VVKFYGHR-REGNIQYLFLEYCSGGELFDRIEPD--------IGMPEPDAQRFFHQLMAG 115
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQ 674
+ YLH + HRD++ ++LLD++ +++ L+ + + +
Sbjct: 116 VVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 160
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.0 bits (189), Expect = 5e-16
Identities = 34/180 (18%), Positives = 70/180 (38%), Gaps = 16/180 (8%)
Query: 511 TGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHAR 568
++ I +G SG ++ +A G V +++++L KKE + E+ + +
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
+V L E +V +Y+ G L + +D + +
Sbjct: 79 IVNYLDSY-LVGDELWVVMEYLAGGSLTDVVTE---------TCMDEGQIAAVCRECLQA 128
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688
L +LH ++HRD+++ +ILL V+L AQ Q+ + + + +
Sbjct: 129 LEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFG-FCAQITPEQSKRSTMVGTPYWMA 184
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.0 bits (186), Expect = 9e-16
Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 20/185 (10%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAGGT-----TVVVKKVSLHSFKKE--SYMMELDLFSRVS 565
+ +I G G+++KG L + V +K + +K+ ++ E + + S
Sbjct: 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 67
Query: 566 HARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGA 625
H ++ L G +++ +++ +YM G + + + + + G
Sbjct: 68 HHNIIRLEGVISKYK-PMMIITEYMENGA-------LDKFLREKDGEFSVLQLVGMLRGI 119
Query: 626 AEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWR 683
A G+ + N VHRD+ A +IL++ ++ LS + +
Sbjct: 120 AAGM---KYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 176
Query: 684 QLYQS 688
+ +
Sbjct: 177 IRWTA 181
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 76.3 bits (187), Expect = 2e-15
Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 20/189 (10%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAG-GTTVVVKKVSLHSFKKESYM-------MELDLFSRV 564
+FS +I +G G+++ A G +K + K + + L L S
Sbjct: 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64
Query: 565 SHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIG 624
+V + + + M GDL L + A
Sbjct: 65 DCPFIVCMSY-AFHTPDKLSFILDLMNGGDLHYHLSQH--------GVFSEADMRFYAAE 115
Query: 625 AAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQ 684
GL ++H+ +V+RD++ ++ILLD+ VR+ L +
Sbjct: 116 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 172
Query: 685 LYQSCMNGP 693
+ G
Sbjct: 173 APEVLQKGV 181
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 75.9 bits (186), Expect = 2e-15
Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 13/150 (8%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSL-HSFKKESYMMELDLFSRVSHARLV 570
++ + G G + + T A G K V H KE+ E+ S + H LV
Sbjct: 27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 86
Query: 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
L E + E +++Y++M G+L + + ++ +GL
Sbjct: 87 NLHD-AFEDDNEMVMIYEFMSGGELFEKVAD-------EHNKMSEDEAVEYMRQVCKGLC 138
Query: 631 YLHHECNPPLVHRDVQASSILLDDKFEVRL 660
++H VH D++ +I+ K L
Sbjct: 139 HMHENN---YVHLDLKPENIMFTTKRSNEL 165
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.7 bits (183), Expect = 3e-15
Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 20/183 (10%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKES----YMMELDLFSRVSHA 567
+F ++ +G + LA +K + KE+ E D+ SR+ H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 568 RLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE 627
V L + + + Y G+L + ++ ++ AE
Sbjct: 69 FFVKLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-----------CTRFYTAE 116
Query: 628 GLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQL 685
+S L + ++HRD++ +ILL++ +++ +++ +S Q F+
Sbjct: 117 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANSFVGTAQ 175
Query: 686 YQS 688
Y S
Sbjct: 176 YVS 178
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.6 bits (180), Expect = 5e-15
Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 20/182 (10%)
Query: 519 LIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPL 572
I +G GD+ +G V +K + +E ++ E + H +V L
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 573 LGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYL 632
+G E+ ++ + G+L SLD + + A + L+YL
Sbjct: 74 IGVITENPV--WIIMELCTLGELR-------SFLQVRKYSLDLASLILYAYQLSTALAYL 124
Query: 633 HHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQLYQSCM 690
VHRD+ A ++L+ V+LG LS ++ + + + +
Sbjct: 125 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 181
Query: 691 NG 692
N
Sbjct: 182 NF 183
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.8 bits (180), Expect = 7e-15
Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 20/165 (12%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKV---SLHSFKKESYMMELDLFSR 563
+ +G G + + G TV VK + + HS + L
Sbjct: 14 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73
Query: 564 VSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHR--------VTDLEDDSLQSLDW 615
H +V LLG C + +++ ++ G+L++ L ED L
Sbjct: 74 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 133
Query: 616 ITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660
+ + A+G+ +L +HRD+ A +ILL +K V++
Sbjct: 134 EHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKI 175
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.4 bits (179), Expect = 8e-15
Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 17/193 (8%)
Query: 500 DSFTYEQLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKE--SYMME 557
D + L G F + + + L K T V VK + + +K+ + E
Sbjct: 13 DRLVLGKPL-GEGAFGQ---VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68
Query: 558 LDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHR--------VTDLEDDS 609
+++ + + + L + ++ +Y G+L L + +
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 128
Query: 610 LQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669
+ L + A A G+ YL +HRD+ A ++L+ + +++
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI 185
Query: 670 GDSHQNVLTRFLW 682
T
Sbjct: 186 HHIDYYKKTTNGR 198
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.1 bits (181), Expect = 9e-15
Identities = 32/191 (16%), Positives = 73/191 (38%), Gaps = 20/191 (10%)
Query: 506 QLLRATGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK--ESYMMELDLFS 562
Q+ ++ + I +G G + V +KK+S + + + E+ +
Sbjct: 2 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 61
Query: 563 RVSHARLVPLLGQCLEHETEK---LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRL 619
R H ++ + E+ + + +++ DL L Q L
Sbjct: 62 RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT---------QHLSNDHIC 112
Query: 620 KIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS--LSELHAQGDSHQNVL 677
GL Y+H ++HRD++ S++LL+ ++++ L+ + H L
Sbjct: 113 YFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 169
Query: 678 TRFLWRQLYQS 688
T ++ + Y++
Sbjct: 170 TEYVATRWYRA 180
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 73.9 bits (181), Expect = 9e-15
Identities = 26/144 (18%), Positives = 59/144 (40%), Gaps = 13/144 (9%)
Query: 519 LIKKGHSGDLFKGT-LAGGTTVVVKKVSL-HSFKKESYMMELDLFSRVSHARLVPLLGQC 576
+ G G + + A G V K ++ + K + E+ + +++ H +L+ L
Sbjct: 36 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD-A 94
Query: 577 LEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC 636
E + E +L+ +++ G+L + + + A EGL ++H
Sbjct: 95 FEDKYEMVLILEFLSGGELFDRIAA-------EDYKMSEAEVINYMRQACEGLKHMH--- 144
Query: 637 NPPLVHRDVQASSILLDDKFEVRL 660
+VH D++ +I+ + K +
Sbjct: 145 EHSIVHLDIKPENIMCETKKASSV 168
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.7 bits (175), Expect = 3e-14
Identities = 35/162 (21%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 506 QLLRATGNFSETNLIKKGHSGDLFKGTLAG-----GTTVVVKKVSLHSFKK--ESYMMEL 558
++L+ T F + ++ G G ++KG V +K++ + K + + E
Sbjct: 4 RILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 62
Query: 559 DLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITR 618
+ + V + + LLG CL L+ + M G L D + ++
Sbjct: 63 YVMASVDNPHVCRLLGICLTST--VQLITQLMPFGCL-------LDYVREHKDNIGSQYL 113
Query: 619 LKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660
L + A+G++YL LVHRD+ A ++L+ V++
Sbjct: 114 LNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKI 152
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 71.3 bits (174), Expect = 3e-14
Identities = 36/161 (22%), Positives = 62/161 (38%), Gaps = 24/161 (14%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFK----------KESYMMELDLF 561
N+ ++ +G S + + VK + + +E+ + E+D+
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 562 SRVS-HARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLK 620
+VS H ++ L E T LV+ M G+L L +L K
Sbjct: 64 RKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLTEK--------VTLSEKETRK 114
Query: 621 IAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661
I E + LH +VHRD++ +ILLDD ++L
Sbjct: 115 IMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLT 152
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.2 bits (174), Expect = 5e-14
Identities = 20/143 (13%), Positives = 54/143 (37%), Gaps = 12/143 (8%)
Query: 519 LIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCL 577
+ +G G + + + T + K V + + E+ + + H ++ L
Sbjct: 12 DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHE-SF 70
Query: 578 EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECN 637
E E +++++++ D+ ++ S L+ + E L +LH +
Sbjct: 71 ESMEELVMIFEFISGLDIFERINT-------SAFELNEREIVSYVHQVCEALQFLH---S 120
Query: 638 PPLVHRDVQASSILLDDKFEVRL 660
+ H D++ +I+ + +
Sbjct: 121 HNIGHFDIRPENIIYQTRRSSTI 143
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.2 bits (171), Expect = 6e-14
Identities = 35/178 (19%), Positives = 63/178 (35%), Gaps = 22/178 (12%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFKK----ESYMMELDLFSRV 564
+ + G G + +G +V VK + + + ++ E++ +
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 565 SHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIG 624
H L+ L G L +V + G L D T + A+
Sbjct: 69 DHRNLIRLYGVVLTPPM--KMVTELAPLGSLL-------DRLRKHQGHFLLGTLSRYAVQ 119
Query: 625 AAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRF 680
AEG+ YL + +HRD+ A ++LL + V++G L Q D H +
Sbjct: 120 VAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 174
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 67.6 bits (164), Expect = 7e-13
Identities = 29/149 (19%), Positives = 56/149 (37%), Gaps = 13/149 (8%)
Query: 508 LRATGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSH 566
LR + I G GD++ GT +A G V +K + + K +E ++ +
Sbjct: 3 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQG 61
Query: 567 ARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAA 626
+P + C ++V + + DL + + T L +A
Sbjct: 62 GVGIPTIRWCGAEGDYNVMVMELLGPSLE--------DLFNFCSRKFSLKTVLLLADQMI 113
Query: 627 EGLSYLHHECNPPLVHRDVQASSILLDDK 655
+ Y+H + +HRDV+ + L+
Sbjct: 114 SRIEYIHSKN---FIHRDVKPDNFLMGLG 139
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 67.2 bits (163), Expect = 7e-13
Identities = 30/174 (17%), Positives = 69/174 (39%), Gaps = 15/174 (8%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKK---ESYMMELDLFSRVSHARL 569
+ I +G G ++K G T +KK+ L + + + E+ + + H+ +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 570 VPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGL 629
V L H ++L++ + DL L L+ +T + G+
Sbjct: 63 VKLYDVI--HTKKRLVLVFEHLDQDLKKLLDVCE-------GGLESVTAKSFLLQLLNGI 113
Query: 630 SYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWR 683
+Y H + ++HRD++ ++L++ + E+++ A G + +
Sbjct: 114 AYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL 164
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.9 bits (165), Expect = 8e-13
Identities = 33/192 (17%), Positives = 62/192 (32%), Gaps = 23/192 (11%)
Query: 502 FTYEQLLRATGNFSE----TNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK---ES 553
F +++ + + G G + G V +KK+ + +
Sbjct: 4 FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63
Query: 554 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV---CGDLASSLHRVTDLEDDSL 610
EL L + H ++ LL ET Y+V G L +
Sbjct: 64 AYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-------- 115
Query: 611 QSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670
+ L + +GL Y+H HRD++ ++ +++ E+++ L Q
Sbjct: 116 EKLGEDRIQFLVYQMLKGLRYIHAAGII---HRDLKPGNLAVNEDCELKILDFG-LARQA 171
Query: 671 DSHQNVLTRFLW 682
DS W
Sbjct: 172 DSEMTGYVVTRW 183
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.8 bits (162), Expect = 1e-12
Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 14/159 (8%)
Query: 509 RATGNFSETNLIKKGHSGDLFKGT--LAGGTTVVVKKVSLHSFKKESY------MMELDL 560
RA + I +G G +FK GG V +K+V + + ++ + L
Sbjct: 4 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 63
Query: 561 FSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLK 620
H +V L C T++ +V + L D + + T
Sbjct: 64 LETFEHPNVVRLFDVCTVSRTDRE-TKLTLVFEHVDQDLTTYLDKVPE--PGVPTETIKD 120
Query: 621 IAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659
+ GL +LH +VHRD++ +IL+ +++
Sbjct: 121 MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIK 156
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 66.4 bits (161), Expect = 2e-12
Identities = 25/153 (16%), Positives = 49/153 (32%), Gaps = 13/153 (8%)
Query: 512 GNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLV 570
++ I +G G +F+GT L V +K S E + ++ +
Sbjct: 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGI 63
Query: 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
P + + +LV + DL D + T A +
Sbjct: 64 PNVYYFGQEGLHNVLVIDLLGPSLE--------DLLDLCGRKFSVKTVAMAAKQMLARVQ 115
Query: 631 YLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663
+H + LV+RD++ + L+ +
Sbjct: 116 SIHEKS---LVYRDIKPDNFLIGRPNSKNANMI 145
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.3 bits (158), Expect = 3e-12
Identities = 28/151 (18%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK---ESYMMELDLFSRVSHAR 568
NF + I +G G ++K G V +KK+ L + + + + E+ L ++H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
+V LL E + LV++++ ++ +L + +G
Sbjct: 63 IVKLLDVI-HTENKLYLVFEFLHQDLK-------KFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVR 659
L++ H ++HRD++ ++L++ + ++
Sbjct: 115 LAFCHSHR---VLHRDLKPQNLLINTEGAIK 142
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 64.7 bits (157), Expect = 8e-12
Identities = 26/169 (15%), Positives = 56/169 (33%), Gaps = 17/169 (10%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK----ESYMMELDLFSRVSHA 567
+F + G G + G +K + + E E + S V+H
Sbjct: 5 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 64
Query: 568 RLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE 627
++ + G + + ++ Y+ G+L L+ AAE
Sbjct: 65 FIIRMWGTF-QDAQQIFMIMDYIEGGEL-----------FSLLRKSQRFPNPVAKFYAAE 112
Query: 628 GLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNV 676
L + + +++RD++ +ILLD +++ D +
Sbjct: 113 VCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL 161
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.5 bits (156), Expect = 8e-12
Identities = 31/164 (18%), Positives = 66/164 (40%), Gaps = 19/164 (11%)
Query: 518 NLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK------ESYMMELDLFSRVSHARLV 570
+ + +G ++K V +KK+ L + + + E+ L +SH ++
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
LL H++ LV+ +M + D+ L + +GL
Sbjct: 64 GLLD-AFGHKSNISLVFDFMETDLE--------VIIKDNSLVLTPSHIKAYMLMTLQGLE 114
Query: 631 YLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQ 674
YLH ++HRD++ +++LLD+ ++L + G ++
Sbjct: 115 YLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 155
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.1 bits (155), Expect = 1e-11
Identities = 34/196 (17%), Positives = 74/196 (37%), Gaps = 25/196 (12%)
Query: 509 RATGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK---ESYMMELDLFSRV 564
+ + I +G G++FK G V +KKV + + K+ + + E+ + +
Sbjct: 7 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 66
Query: 565 SHARLVPLLGQC-------LEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWIT 617
H +V L+ C + LV+ + + + +L I
Sbjct: 67 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKF------TLSEIK 120
Query: 618 RLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDSHQ 674
R+ + L+ L++ ++HRD++A+++L+ ++L G +S
Sbjct: 121 RVMQML-----LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 175
Query: 675 NVLTRFLWRQLYQSCM 690
N T + Y+
Sbjct: 176 NRYTNRVVTLWYRPPE 191
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.3 bits (156), Expect = 1e-11
Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 18/144 (12%)
Query: 519 LIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HARLVPLLGQC 576
++ G +G + + +K + E++L R S +V ++
Sbjct: 19 VLGLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVY 74
Query: 577 LEHETEK---LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLH 633
+ L+V + + G+L S + D Q+ +I E + YLH
Sbjct: 75 ENLYAGRKCLLIVMECLDGGELFSRIQDRGD------QAFTEREASEIMKSIGEAIQYLH 128
Query: 634 HECNPPLVHRDVQASSILLDDKFE 657
+ HRDV+ ++L K
Sbjct: 129 SIN---IAHRDVKPENLLYTSKRP 149
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.1 bits (155), Expect = 1e-11
Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 20/187 (10%)
Query: 513 NFSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFKK-----ESYMMELDLFSR 563
NF ++ G G +F G +K + + + E E +
Sbjct: 25 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84
Query: 564 VSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAI 623
+ + + L + ET+ L+ Y+ G+L + L + + ++ I
Sbjct: 85 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH-----------EVQI 133
Query: 624 GAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWR 683
E + L H +++RD++ +ILLD V L F
Sbjct: 134 YVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGT 193
Query: 684 QLYQSCM 690
Y +
Sbjct: 194 IEYMAPD 200
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 63.1 bits (153), Expect = 2e-11
Identities = 18/147 (12%), Positives = 47/147 (31%), Gaps = 12/147 (8%)
Query: 518 NLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLG 574
+++ G ++ V +K ++ + K+ S E+ + ++ H +V L
Sbjct: 15 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 74
Query: 575 QCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHH 634
E L+ + + G+L + ++ + + YLH
Sbjct: 75 -IYESGGHLYLIMQLVSGGELFDRIVEK--------GFYTERDASRLIFQVLDAVKYLHD 125
Query: 635 ECNPPLVHRDVQASSILLDDKFEVRLG 661
+ LD+ ++ +
Sbjct: 126 LGIVHRDLKPENLLYYSLDEDSKIMIS 152
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 62.1 bits (150), Expect = 3e-11
Identities = 22/158 (13%), Positives = 56/158 (35%), Gaps = 19/158 (12%)
Query: 511 TGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESY----MMELDLFSRVS 565
+ + ++ G ++ L V VK + + S+ E + ++
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 566 HARLVPLLGQCLEHETEKL---LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIA 622
H +V + +V +Y+ L +H + +++
Sbjct: 66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--------GPMTPKRAIEVI 117
Query: 623 IGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660
A + L++ H ++HRDV+ ++I++ V++
Sbjct: 118 ADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKV 152
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 61.7 bits (149), Expect = 9e-11
Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 17/156 (10%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK----ESYMMELDLFSRVSHA 567
F + G G + G +K + K E + E + V+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 568 RLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE 627
LV L ++ + V +Y+ G++ S L R+ A
Sbjct: 102 FLVKLEFSFKDNSNLYM-VMEYVAGGEMFSHLRRI--------GRFSEPHARFYAAQIVL 152
Query: 628 GLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663
YLH L++RD++ ++L+D + +++
Sbjct: 153 TFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDF 185
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.6 bits (146), Expect = 2e-10
Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 20/172 (11%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESY----MMELDLFSRVSHA 567
+F L+ KG G + A G +K + + + E + H
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 568 RLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAE 627
L L + V +Y G+L L R ++ + AE
Sbjct: 66 FLTALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-----------RARFYGAE 113
Query: 628 GLSYLHHECNPPLVHRDVQASSILLDDKFEVRL---GSLSELHAQGDSHQNV 676
+S L + + +V+RD++ +++LD +++ G E + G + +
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 165
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 59.8 bits (143), Expect = 3e-10
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Query: 109 IPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKL 168
P+L+ L++ + L +P L RL S N L VP LK+
Sbjct: 275 EIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLERLI---ASFNHL-AEVPELPQNLKQ- 328
Query: 169 SNLDLSRNLLTGEIPNAISLLGNLTRLN 196
L + N L E P+ + +L R+N
Sbjct: 329 --LHVEYNPLR-EFPDIPESVEDL-RMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 55.6 bits (132), Expect = 9e-09
Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 9/93 (9%)
Query: 148 YLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIP 207
N+ + + + L L++S N L E+P +L L RL + N ++P
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELP---ALPPRLERLIASFNHLA-EVP 320
Query: 208 SGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKL 240
+++ L++ N L P +++ L
Sbjct: 321 E---LPQNLKQLHVEYNPLRE-FPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 54.4 bits (129), Expect = 2e-08
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
Query: 125 LRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPN 184
+ S I L L +S N L +PA L++ L S N L E+P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLER---LIASFNHLA-EVP- 320
Query: 185 AISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLN 220
L NL +L++ N + P S+ ++ +
Sbjct: 321 --ELPQNLKQLHVEYNPLR-EFPDIPESVEDLRMNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 43.7 bits (101), Expect = 5e-05
Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 10/96 (10%)
Query: 220 NLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLS 279
NA + I S L EL++S N + LP L +L+ S N L
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELP---ALPPRLERLIASFNHL----- 316
Query: 280 EGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRF 315
+ L+ + + N L P +LR
Sbjct: 317 AEVPELPQNLKQLHVEYNPLRE-FPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 43.3 bits (100), Expect = 6e-05
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 245 LSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALP 304
N+ S + +L +L +S N L L +L+ + S N L +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-----LPALPPRLERLIASFNHL-AEVP 320
Query: 305 ATLFLRPNLRFLDLSRNNITG 325
NL+ L + N +
Sbjct: 321 ELP---QNLKQLHVEYNPLRE 338
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 42.5 bits (98), Expect = 1e-04
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 166 KKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNA 225
++ L+L+ L+ +P L +L L + N T ++P SL S+ N + A
Sbjct: 38 RQAHELELNNLGLS-SLP---ELPPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLKA 92
Query: 226 LTGFIPS 232
L+ P
Sbjct: 93 LSDLPPL 99
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 38.7 bits (88), Expect = 0.002
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Query: 288 QLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324
Q ++L+ L +LP P+L L S N++T
Sbjct: 39 QAHELELNNLGL-SSLPELP---PHLESLVASCNSLT 71
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 38.3 bits (87), Expect = 0.002
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 283 FPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFN 342
L+ +++S NKL LPA P L L S N++ P L N +
Sbjct: 280 CDLPPSLEELNVSNNKLI-ELPALP---PRLERLIASFNHLA-EVPELPQNLK----QLH 330
Query: 343 ISNNML 348
+ N L
Sbjct: 331 VEYNPL 336
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 59.1 bits (142), Expect = 5e-10
Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 26/203 (12%)
Query: 500 DSFTYEQLLRATGNFSETNLIKK---GHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYM 555
+ + YE + GN + L++K G ++F+ + VVVK L KK+
Sbjct: 20 EYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKI--LKPVKKKKIK 77
Query: 556 MELDLFSRVS-HARLVPLLGQCLEHETEKL-LVYKYMVCGDLASSLHRVTDLEDDSLQSL 613
E+ + + ++ L + + LV++++ D Q+L
Sbjct: 78 REIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF-----------KQLYQTL 126
Query: 614 DWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE----VRLGSLSELHAQ 669
+ L Y H ++HRDV+ ++++D + + G H
Sbjct: 127 TDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 183
Query: 670 GDSHQNVLTRFLWRQLYQSCMNG 692
+ + V +R+
Sbjct: 184 QEYNVRVASRYFKGPELLVDYQM 206
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (137), Expect = 3e-09
Identities = 30/154 (19%), Positives = 54/154 (35%), Gaps = 18/154 (11%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK----ESYMMELDLFSRV-SH 566
+F ++ KG G +F +K + E M+E + S H
Sbjct: 3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62
Query: 567 ARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAA 626
L + + + V +Y+ GDL + D A
Sbjct: 63 PFLTHMFCTF-QTKENLFFVMEYLNGGDLMYHIQS--------CHKFDLSRATFYAAEII 113
Query: 627 EGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660
GL +LH + +V+RD++ +ILLD +++
Sbjct: 114 LGLQFLHSKG---IVYRDLKLDNILLDKDGHIKI 144
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.0 bits (136), Expect = 3e-09
Identities = 25/164 (15%), Positives = 58/164 (35%), Gaps = 17/164 (10%)
Query: 498 VGDSFTYEQLLRATGNFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKESYMM 556
G+ + + + GH ++ + T V +K V E+
Sbjct: 6 KGEPY-------KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED 58
Query: 557 ELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSL-------HRVTDLEDDS 609
E+ L RV+ A H + L + + + + + + ++
Sbjct: 59 EIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE 118
Query: 610 LQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD 653
+ + I +I+ GL Y+H C ++H D++ ++L++
Sbjct: 119 HRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLME 160
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (133), Expect = 4e-09
Identities = 52/220 (23%), Positives = 78/220 (35%), Gaps = 12/220 (5%)
Query: 81 NPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGN 140
+P V + + ++ + +LP +P +L L L +
Sbjct: 1 HPICEVSKVASHLEVNCDKRNLTALPPDLP-------KDTTILHLSENLLYTFSLATLMP 53
Query: 141 LSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASN 200
+RL L L G L L LDLS N L +L +++ N
Sbjct: 54 YTRLTQLNLDRAE--LTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVL-DVSFN 110
Query: 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRG 260
T L L +Q L L N L P + KL +L L+ N+++ L G
Sbjct: 111 RLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNG 170
Query: 261 LRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLD 300
L NL L++ EN L + +G F L L GN
Sbjct: 171 LENLDTLLLQENSLY-TIPKGFFG-SHLLPFAFLHGNPWL 208
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.0 bits (123), Expect = 7e-08
Identities = 52/206 (25%), Positives = 80/206 (38%), Gaps = 8/206 (3%)
Query: 116 RLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175
++ + ++ +L+ ++P +L+LS N L ATL +L+ L+L R
Sbjct: 8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDR 64
Query: 176 NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG 235
LT + L L L+L+ N G + ++S N LT +
Sbjct: 65 AELTKLQVDGT--LPVLGTLDLSHNQLQSLPLLGQTLPALTVL-DVSFNRLTSLPLGALR 121
Query: 236 NLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLS 295
L +L EL L N + P L L KL ++ N L L GL L+ L + L
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE-LPAGLLNGLENLDTLLLQ 180
Query: 296 GNKLDGALPATLFLRPNLRFLDLSRN 321
N +P F L F L N
Sbjct: 181 ENS-LYTIPKGFFGSHLLPFAFLHGN 205
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.1 bits (134), Expect = 4e-09
Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 16/152 (10%)
Query: 513 NFSETNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKK---ESYMMELDLFSRVSHAR 568
+ + I +G G +FK V +K+V L + S + E+ L + H
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
+V L + L+ + + +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI------------VKSFLFQL 110
Query: 629 LSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660
L L + ++HRD++ ++L++ E++L
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKL 142
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.3 bits (129), Expect = 1e-08
Identities = 49/254 (19%), Positives = 87/254 (34%), Gaps = 17/254 (6%)
Query: 87 DSLGNLTLLS--SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSG-SIPGSFGNLSR 143
D G L +F + + E F +Q +DL + + ++ G S+
Sbjct: 15 DVTGRLLSQGVIAFRCPRSFMDQPLAEHF--SPFRVQHMDLSNSVIEVSTLHGILSQCSK 72
Query: 144 LNVLYLSGNSLAGNVPATLGELKKLSNLDLSR--NLLTGEIPNAISLLGNLTRLNLASNF 201
L L L G L+ + TL + L L+LS + +S L LNL+ F
Sbjct: 73 LQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCF 132
Query: 202 FTG------QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKN-SISGSL 254
+ +++ + N + + V L+ LDLS + +
Sbjct: 133 DFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDC 192
Query: 255 PLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLR 314
E L L L +S + + L+ + + G DG L L+ L
Sbjct: 193 FQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQL---LKEALP 249
Query: 315 FLDLSRNNITGSWP 328
L ++ ++ T
Sbjct: 250 HLQINCSHFTTIAR 263
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.4 bits (98), Expect = 1e-04
Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Query: 243 LDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL-DG 301
LDL+ ++ + L + + + ++ L+E P ++Q +DLS + +
Sbjct: 5 LDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFSPF--RVQHMDLSNSVIEVS 61
Query: 302 ALPATLFLRPNLRFLDLSRNNITGSWP 328
L L L+ L L ++
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIV 88
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.4 bits (130), Expect = 2e-08
Identities = 23/145 (15%), Positives = 53/145 (36%), Gaps = 20/145 (13%)
Query: 519 LIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFK-------KESYMMELDLFSRVSHARLV 570
+ G + K + G K + K +E E+ + + H ++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 571 PLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLS 630
L E++T+ +L+ + + G+L L +SL + G+
Sbjct: 77 TLHE-VYENKTDVILILELVAGGELFDFLAEK--------ESLTEEEATEFLKQILNGV- 126
Query: 631 YLHHECNPPLVHRDVQASSILLDDK 655
++ + + H D++ +I+L D+
Sbjct: 127 --YYLHSLQIAHFDLKPENIMLLDR 149
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.9 bits (129), Expect = 2e-08
Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 22/168 (13%)
Query: 519 LIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFKKES-------YMMELDLFSRVS--HAR 568
L+ G G ++ G ++ V +K V ME+ L +VS +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 569 LVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEG 628
++ LL E +L+ + +L E
Sbjct: 71 VIRLLDWF-ERPDSFVLILERPEPVQDLFDFIT-------ERGALQEELARSFFWQVLEA 122
Query: 629 LSYLHHECNPPLVHRDVQASSILLD-DKFEVRLGSLSELHAQGDSHQN 675
+ + N ++HRD++ +IL+D ++ E++L D+
Sbjct: 123 VRHC---HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT 167
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.0 bits (130), Expect = 2e-08
Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 10/89 (11%)
Query: 168 LSNLDLSRNLLTGE-IPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLS 222
+ +LD+ L+ + LL + L T I S L ++ LNL
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 223 DNALTGFIPSEVG-----NLDKLIELDLS 246
N L V K+ +L L
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQ 92
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.8 bits (127), Expect = 5e-08
Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 120 LQVLDLRSCSLSGS-IPGSFGNLSRLNVLYLSGNSL----AGNVPATLGELKKLSNLDLS 174
+Q LD++ LS + L + V+ L L ++ + L L+ L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 175 RNLLTGEIPNAI-----SLLGNLTRLNLASNFF 202
N L + + + + +L+L +
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.1 bits (125), Expect = 7e-08
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Query: 263 NLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG----ALPATLFLRPNLRFLDL 318
++ L I L L P L Q QVV L L + + L + P L L+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 319 SRNNITGS 326
N +
Sbjct: 63 RSNELGDV 70
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.5 bits (121), Expect = 2e-07
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 135 PGSFGNLSRLNVLYLSGNSL----AGNVPATLGELKKLSNLDLSRNLLTGEIPNAIS--- 187
G S L VL+L+ + ++ ATL L LDLS N L +
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 188 --LLGNLTRLNLASNFFTGQIPSGLYSL 213
L +L L +++ ++ L +L
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.7 bits (119), Expect = 4e-07
Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 10/89 (11%)
Query: 191 NLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNALTGFIPSEVG-----NLDKLI 241
L L LA + + + L + S++ L+LS+N L ++ L
Sbjct: 370 VLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 429
Query: 242 ELDLSKNSISGSLPLELRGLR-NLAKLVI 269
+L L S + L+ L + L +
Sbjct: 430 QLVLYDIYWSEEMEDRLQALEKDKPSLRV 458
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.4 bits (118), Expect = 5e-07
Identities = 21/91 (23%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 108 SIPEWFGYRLPALQVLDLRSCSLSG----SIPGSFGNLSRLNVLYLSGNSLAGNVPATLG 163
+ + G L+VL L C +S S+ + L L LS N L L
Sbjct: 359 ELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLV 418
Query: 164 E-----LKKLSNLDLSRNLLTGEIPNAISLL 189
E L L L + E+ + + L
Sbjct: 419 ESVRQPGCLLEQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.6 bits (116), Expect = 8e-07
Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 9/97 (9%)
Query: 240 LIELDLSKNSISGSLPLEL-RGLRNLAKLVISENGLEGQLSEGL---FPTLDQLQVVDLS 295
+ LD+ +S + EL L+ + + + GL + + L ++L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 296 GNKLDGALPATLF-----LRPNLRFLDLSRNNITGSW 327
N+L + ++ L L +TG+
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAG 100
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (112), Expect = 2e-06
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 11/87 (12%)
Query: 191 NLTRLNLASNFFT-GQIPSGLYSLSSIQFLNLSDNALTG----FIPSEVGNLDKLIELDL 245
++ L++ + + L L Q + L D LT I S + L EL+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 246 SKNSISGSLPLELRGLRNLAKLVISEN 272
N + G+ + + + + +
Sbjct: 63 RSNELGDV------GVHCVLQGLQTPS 83
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (108), Expect = 7e-06
Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 28/120 (23%)
Query: 205 QIPSGLYSLSSIQFLNLSDNALTG----FIPSEVGNLDKLIELDLSKNSISGSLPLELRG 260
S ++ L L+D ++ + + + L ELDLS N + + G
Sbjct: 360 LCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA------G 413
Query: 261 LRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG----ALPATLFLRPNLRFL 316
+ L + V L L+ + L L A +P+LR +
Sbjct: 414 ILQLVESVRQPGCL--------------LEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.4 bits (105), Expect = 2e-05
Identities = 15/90 (16%), Positives = 27/90 (30%), Gaps = 4/90 (4%)
Query: 95 LSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSG----SIPGSFGNLSRLNVLYLS 150
+ S + L + L QV+ L C L+ I + L L L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 151 GNSLAGNVPATLGELKKLSNLDLSRNLLTG 180
N L + + + + + + L
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (87), Expect = 0.002
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 280 EGLFPTLDQLQVVDLSGNKLDG----ALPATLFLRPNLRFLDLSRNNITGS 326
+GL L+V+ L+ + +L ATL +LR LDLS N + +
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 412
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (87), Expect = 0.003
Identities = 18/95 (18%), Positives = 24/95 (25%), Gaps = 26/95 (27%)
Query: 236 NLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLS 295
L L L+ +S S +LA L+ +DLS
Sbjct: 367 PGSVLRVLWLADCDVSDS------SCSSLAAT---------------LLANHSLRELDLS 405
Query: 296 GNKLDGALPATLF-----LRPNLRFLDLSRNNITG 325
N L A L L L L +
Sbjct: 406 NNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 440
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (86), Expect = 0.003
Identities = 13/85 (15%), Positives = 24/85 (28%), Gaps = 8/85 (9%)
Query: 91 NLTLLSSFNASGLSLPGSIPEWFGY---RLPALQVLDLRSCSLSGSIPGSFG-----NLS 142
++L + + S +L+ LDL + L +
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 143 RLNVLYLSGNSLAGNVPATLGELKK 167
L L L + + L L+K
Sbjct: 427 LLEQLVLYDIYWSEEMEDRLQALEK 451
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 51.3 bits (122), Expect = 5e-08
Identities = 24/140 (17%), Positives = 44/140 (31%), Gaps = 10/140 (7%)
Query: 518 NLIKKGHSGDLFKGTLAGGTTVVVK--KVSLHSFKKESYMMELDLFSRVSHARLVPLLGQ 575
L+ +G +F VVK KV SFKK + A
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS----A 61
Query: 576 CLEHETEKLLVYKYMVCGDLASSLHRVTDLED-DSLQSLDWITRLKIAIGAAEGLSYLHH 634
E + L + + +L D L + ++ E ++ +H
Sbjct: 62 RNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYH 121
Query: 635 ECNPPLVHRDVQASSILLDD 654
+VH D+ ++L+ +
Sbjct: 122 RG---IVHGDLSQYNVLVSE 138
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.0 bits (121), Expect = 2e-07
Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 16/162 (9%)
Query: 501 SFTYEQLLRATGNFSE----TNLIKKGHSGDLFKGT-LAGGTTVVVKKVSLHSFK---KE 552
+F ++L + E + + G G + G V VKK+S +
Sbjct: 3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 62
Query: 553 SYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQS 612
EL L + H ++ LL + + Y+V L Q
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH-----LMGADLNNIVKCQK 117
Query: 613 LDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD 654
L + GL Y+H HRD++ S++ +++
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNE 156
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.0 bits (111), Expect = 5e-07
Identities = 32/122 (26%), Positives = 46/122 (37%), Gaps = 7/122 (5%)
Query: 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTG 180
+VL L L+ + L + L LS N L PA L L+ L L S N
Sbjct: 1 RVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDN--AL 55
Query: 181 EIPNAISLLGNLTRLNLASNFFTG-QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDK 239
E + ++ L L L L +N L S + LNL N+L L +
Sbjct: 56 ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ-EEGIQERLAE 114
Query: 240 LI 241
++
Sbjct: 115 ML 116
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.9 bits (103), Expect = 5e-06
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 195 LNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSL 254
L+LA T + L L + L+LS N L P+ + L L L S N++
Sbjct: 3 LHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALEN-- 57
Query: 255 PLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL---DGALPATLFLRP 311
+ L L +L++ N L+ + + +L +++L GN L +G + P
Sbjct: 58 VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLP 117
Query: 312 NLRFL 316
++ +
Sbjct: 118 SVSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.9 bits (90), Expect = 3e-04
Identities = 26/114 (22%), Positives = 39/114 (34%), Gaps = 8/114 (7%)
Query: 86 VDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLN 145
+ L L L++ + S L P L L+VL + NL RL
Sbjct: 13 LCHLEQLLLVTHLDLSHNRLRALPPALAA--LRCLEVLQASDNA--LENVDGVANLPRLQ 68
Query: 146 VLYLSGNSLAG-NVPATLGELKKLSNLDLSRNLLTGE---IPNAISLLGNLTRL 195
L L N L L +L L+L N L E +L +++ +
Sbjct: 69 ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 46.7 bits (109), Expect = 2e-06
Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 4/109 (3%)
Query: 127 SCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAI 186
+ F L +L L L N ++ +P + L L++L+ + +
Sbjct: 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN-LASNPFNCNCHLA 145
Query: 187 SLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG 235
L + +L PS + +Q +L + + G
Sbjct: 146 WFAEWLRKKSLNGGAARCGAPS---KVRDVQIKDLPHSEFKCSSENSEG 191
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 42.9 bits (99), Expect = 3e-05
Identities = 39/181 (21%), Positives = 67/181 (37%), Gaps = 9/181 (4%)
Query: 145 NVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAI-SLLGNLTRLNLASNFFT 203
+ +G L +P + + L L+ N L + + L +L +L L N T
Sbjct: 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 67
Query: 204 GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRN 263
G P+ S IQ L L +N + L +L L+L N IS +P L +
Sbjct: 68 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNS 127
Query: 264 LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNI 323
L L ++ N F + + L+G P+ + +++ DL +
Sbjct: 128 LTSLNLASNPFNCNCHLAWFAEWLRKK--SLNGGAARCGAPSKV---RDVQIKDLPHSEF 182
Query: 324 T 324
Sbjct: 183 K 183
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 42.1 bits (97), Expect = 8e-05
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 5/97 (5%)
Query: 107 GSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELK 166
+ F L L+ L+L +S +PGSF +L+ L L L+ N N +
Sbjct: 92 EISNKMFL-GLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH-LAWFAE 149
Query: 167 KLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFT 203
L L+ P+ + ++ +L + F
Sbjct: 150 WLRKKSLNGGAARCGAPSK---VRDVQIKDLPHSEFK 183
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (107), Expect = 3e-06
Identities = 26/144 (18%), Positives = 45/144 (31%), Gaps = 12/144 (8%)
Query: 133 SIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNL 192
+ + L L L L+ ++ + + L
Sbjct: 11 QLKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRRSSMAA-TLRIIEENIPEL 67
Query: 193 TRLNLASNFFTGQ--IPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250
LNL++N + S + +++ LNLS N L + KL EL L NS+
Sbjct: 68 LSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSL 127
Query: 251 SGSLPLE-------LRGLRNLAKL 267
S + + L +L
Sbjct: 128 SDTFRDQSTYISAIRERFPKLLRL 151
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (107), Expect = 3e-06
Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 14/155 (9%)
Query: 172 DLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIP 231
+L + ++ +S + ++ L + L + + LN + +
Sbjct: 3 ELKPEQVE-QLKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRRSSMAA-TLR 58
Query: 232 SEVGNLDKLIELDLSKNSISG--SLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQL 289
N+ +L+ L+LS N + + ++ NL L +S N L+ E +L
Sbjct: 59 IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGLKL 117
Query: 290 QVVDLSGNKLDGALPATLFLR-------PNLRFLD 317
+ + L GN L P L LD
Sbjct: 118 EELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.1 bits (98), Expect = 4e-05
Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 7/128 (5%)
Query: 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNL 177
+ Q LDL+ + VL + A + + +L +L+LS N
Sbjct: 22 GSQQALDLKGLR----SDPDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNR 76
Query: 178 LTG--EIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVG 235
L ++ + + NL LNL+ N + ++ L L N+L+ +
Sbjct: 77 LYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136
Query: 236 NLDKLIEL 243
+ + E
Sbjct: 137 YISAIRER 144
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.3 bits (88), Expect = 0.001
Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 4/125 (3%)
Query: 205 QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNL 264
Q+ + L L ++ + + L+ + + +L + + L
Sbjct: 11 QLKLIMSKRYDGSQQALDLKGLR--SDPDLVAQNIDVVLNRRSSMAA-TLRIIEENIPEL 67
Query: 265 AKLVISENGLEG-QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNI 323
L +S N L + L++++LSGN+L L L L N++
Sbjct: 68 LSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSL 127
Query: 324 TGSWP 328
+ ++
Sbjct: 128 SDTFR 132
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.6 bits (101), Expect = 1e-05
Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 3/147 (2%)
Query: 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYS-LSSIQFLNLSDNAL 226
S L +R+ + + + NLT L + + + L ++ L + + L
Sbjct: 10 SSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL 68
Query: 227 TGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTL 286
P +L L+LS N++ SL + +L +LV+S N L +
Sbjct: 69 RFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRW 127
Query: 287 DQLQVVDLSGNKLDGALPATLFLRPNL 313
++ + + KL L PN
Sbjct: 128 EEEGLGGVPEQKLQCHGQGPLAHMPNA 154
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 44.2 bits (103), Expect = 2e-05
Identities = 35/222 (15%), Positives = 70/222 (31%), Gaps = 18/222 (8%)
Query: 99 NASGLSLPGSIPEWFG-YRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGN 157
+ +++P I + F +L+ S++ ++ + L+ ++ + + + +
Sbjct: 4 GSETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSV 61
Query: 158 VPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQ 217
+ L ++ L L+ N LT P L NL L
Sbjct: 62 QG--IQYLPNVTKLFLNGNKLTDIKP-----LANLKNLGWLFLDENKVKDLSSLKDLKKL 114
Query: 218 FLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQ 277
++ I V + ++ L L L+ + +
Sbjct: 115 KSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP- 173
Query: 278 LSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLS 319
L +LQ + LS N + L A L NL L+L
Sbjct: 174 -----LAGLTKLQNLYLSKNHISD-LRALAGL-KNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 38.8 bits (89), Expect = 0.001
Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 15/186 (8%)
Query: 140 NLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199
+ L S+ V T EL + + + + + I L N+T+L L
Sbjct: 22 AFAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS--VQGIQYLPNVTKLFLNG 77
Query: 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELR 259
N T P FL+ + + S+ + ++
Sbjct: 78 NKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKL---------KSLSLEHNGISDIN 128
Query: 260 GLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLS 319
GL +L +L G + L +L + L N++ +P L L+ L LS
Sbjct: 129 GLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLS 186
Query: 320 RNNITG 325
+N+I+
Sbjct: 187 KNHISD 192
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 37.3 bits (85), Expect = 0.003
Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 244 DLSKNSISGSLPL----ELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL 299
L +I+ P+ K + + + +++ L+ + + + + +
Sbjct: 2 PLGSETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNE---LNSIDQIIANNSDI 58
Query: 300 DGALPATLFLRPNLRFLDLSRNNITGSWPI 329
+ PN+ L L+ N +T P+
Sbjct: 59 KSVQG--IQYLPNVTKLFLNGNKLTDIKPL 86
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 36.9 bits (84), Expect = 0.004
Identities = 43/198 (21%), Positives = 68/198 (34%), Gaps = 29/198 (14%)
Query: 91 NLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLS 150
N S+ ++ + L ++ + + + L + L+L+
Sbjct: 22 AFAETIKDNLKKKSVTDAVTQN---ELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLN 76
Query: 151 GNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNA------------------ISLLGNL 192
GN L P L LK L L L N + L+
Sbjct: 77 GNKLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLP 134
Query: 193 TRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252
+L + L L+ + L+L DN ++ +P + L KL L LSKN IS
Sbjct: 135 QLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS- 191
Query: 253 SLPLELRGLRNLAKLVIS 270
L L GL+NL L +
Sbjct: 192 DLR-ALAGLKNLDVLELF 208
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (101), Expect = 2e-05
Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 4/134 (2%)
Query: 137 SFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196
+ N R L L G + + L + +D S N + ++ LL L L
Sbjct: 13 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLDG-FPLLRRLKTLL 69
Query: 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGF-IPSEVGNLDKLIELDLSKNSISGSLP 255
+ +N +L + L L++N+L + +L L L + +N ++
Sbjct: 70 VNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKH 129
Query: 256 LELRGLRNLAKLVI 269
L + + ++ +
Sbjct: 130 YRLYVIYKVPQVRV 143
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (95), Expect = 1e-04
Identities = 25/135 (18%), Positives = 46/135 (34%), Gaps = 7/135 (5%)
Query: 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRN 176
+ LDLR + I L + + + S N + L++L L ++ N
Sbjct: 17 AVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEI--RKLDGFPLLRRLKTLLVNNN 73
Query: 177 LLTGEIPNAISLLGNLTRLNLASNFFTG----QIPSGLYSLSSIQFLNLSDNALTGFIPS 232
+ L +LT L L +N + L SL+ + L +
Sbjct: 74 RICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLY 133
Query: 233 EVGNLDKLIELDLSK 247
+ + ++ LD K
Sbjct: 134 VIYKVPQVRVLDFQK 148
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (94), Expect = 1e-04
Identities = 26/151 (17%), Positives = 53/151 (35%), Gaps = 8/151 (5%)
Query: 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPS 232
L+ L+ + + + L+L I + +L ++ SDN +
Sbjct: 3 LTAELIE-QAAQYTNAV-RDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--D 57
Query: 233 EVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVV 292
L +L L ++ N I + L +L +L+++ N L +L L +
Sbjct: 58 GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYL 117
Query: 293 DLSGNK---LDGALPATLFLRPNLRFLDLSR 320
+ N ++ P +R LD +
Sbjct: 118 CILRNPVTNKKHYRLYVIYKVPQVRVLDFQK 148
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.7 bits (101), Expect = 3e-05
Identities = 11/66 (16%), Positives = 18/66 (27%), Gaps = 13/66 (19%)
Query: 107 GSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELK 166
+P + +LD+ + NL +L LK
Sbjct: 190 EELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN-------------LK 236
Query: 167 KLSNLD 172
KL L+
Sbjct: 237 KLPTLE 242
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (92), Expect = 4e-04
Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Query: 199 SNFFTGQIPSG-LYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLP 255
N ++P+ + S L++S + + NL KL LP
Sbjct: 185 DNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK---KLP 239
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.9 bits (91), Expect = 6e-04
Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Query: 134 IPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPN 184
F S +L +S + L LKKL NL ++P
Sbjct: 193 PNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST-YNL--KKLPT 240
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.2 bits (84), Expect = 0.004
Identities = 6/39 (15%), Positives = 12/39 (30%), Gaps = 3/39 (7%)
Query: 290 QVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP 328
+V +K+ +P+ L N L +
Sbjct: 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQK 46
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 42.3 bits (98), Expect = 8e-05
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 191 NLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLS 246
LT L N + P L SL ++ ++L +N ++ P + N L + L+
Sbjct: 174 KLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 41.6 bits (96), Expect = 1e-04
Identities = 36/232 (15%), Positives = 66/232 (28%), Gaps = 24/232 (10%)
Query: 103 LSLPGSIPEWFG-YRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPAT 161
++ P +I F L + +++ ++ + +L + L G + +
Sbjct: 3 ITQPTAINVIFPDPALANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIEG- 58
Query: 162 LGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNL 221
+ L L L+L N +T P L+ I +
Sbjct: 59 VQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQ 118
Query: 222 SDNALTGFIPSEVGNLDKLIEL--------------DLSKNSISGSLPLELRGLRNLAKL 267
+ S + L + LS + S L L L L
Sbjct: 119 ITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTL 178
Query: 268 VISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLS 319
+N + +L L V L N++ P L NL + L+
Sbjct: 179 KADDNKISDISP---LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 41.6 bits (96), Expect = 1e-04
Identities = 33/203 (16%), Positives = 60/203 (29%), Gaps = 19/203 (9%)
Query: 140 NLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199
L+ + +++ V T +L ++ L +T I + L NL L L
Sbjct: 17 ALANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKD 72
Query: 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELR 259
N T P + + L+ + I + + + L+
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 260 GLRNLAKLVISENGLE-------------GQLSEGLFPTLDQLQVVDLSGNKLDGALPAT 306
L + + + L L +L + NK+ P
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP-- 190
Query: 307 LFLRPNLRFLDLSRNNITGSWPI 329
L PNL + L N I+ P+
Sbjct: 191 LASLPNLIEVHLKNNQISDVSPL 213
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 40.8 bits (94), Expect = 2e-04
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 162 LGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNL 221
L L KL+ L N ++ P ++ L NL ++L +N + P L + S++ + L
Sbjct: 169 LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
Query: 222 SD 223
++
Sbjct: 225 TN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 40.4 bits (93), Expect = 3e-04
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 138 FGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNL 197
NLS+L L N ++ P L L L + L N ++ P ++ NL + L
Sbjct: 169 LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
Query: 198 ASN 200
+N
Sbjct: 225 -TN 226
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 41.0 bits (94), Expect = 3e-04
Identities = 8/65 (12%), Positives = 21/65 (32%), Gaps = 5/65 (7%)
Query: 164 ELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFL 219
E K L ++ + + ++ + L+ N + + + S ++
Sbjct: 6 EGKSLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIA 64
Query: 220 NLSDN 224
SD
Sbjct: 65 EFSDI 69
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.9 bits (91), Expect = 9e-04
Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 269 ISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDG----ALPATLFLR-PNLRFLDLSRNNI 323
+S G + LQ + L N+++ L + + P+L FL+L+ N
Sbjct: 255 LSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 314
Query: 324 TGSWPILST 332
+ ++
Sbjct: 315 SEEDDVVDE 323
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.5 bits (90), Expect = 0.001
Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 6/57 (10%)
Query: 117 LPALQVLDLRSCSLSGSIPGS-----FGNLSRLNVLYLSGNSLAGNVPATLGELKKL 168
LQ L L+ + + + L L L+GN + E++++
Sbjct: 272 NIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF-SEEDDVVDEIREV 327
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 38.7 bits (88), Expect = 0.002
Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 8/84 (9%)
Query: 144 LNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGE----IPNAISLLGNLTRLNLAS 199
L + ++ +V A L E + + LS N + E + I+ +L +
Sbjct: 10 LKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSD 68
Query: 200 NF---FTGQIPSGLYSLSSIQFLN 220
F +IP L L
Sbjct: 69 IFTGRVKDEIPEALRLLLQALLKC 92
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 37.6 bits (85), Expect = 0.004
Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 11/88 (12%)
Query: 120 LQVLDLRSCSLSG----SIPGSFGNLSRLNVLYLSGNSL----AGNVPATLGELKKLSNL 171
++ L+ +++ S+ + + LSGN++ A + + K L
Sbjct: 5 IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIA 64
Query: 172 DLSRN---LLTGEIPNAISLLGNLTRLN 196
+ S + EIP A+ LL
Sbjct: 65 EFSDIFTGRVKDEIPEALRLLLQALLKC 92
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 693 | |||
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.98 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.98 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 99.98 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.98 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 99.98 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 99.97 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 99.97 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 99.97 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 99.97 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 99.97 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 99.97 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.97 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 99.97 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.97 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.97 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.97 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 99.97 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 99.97 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 99.97 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.97 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.97 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.97 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.97 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.97 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.97 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.97 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 99.97 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.97 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.96 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.96 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.96 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.96 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 99.96 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.96 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 99.96 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.96 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.96 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.96 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.96 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.95 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.95 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.95 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.95 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.95 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.94 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.94 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.94 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.94 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.94 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.94 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.93 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.93 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.93 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.93 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.93 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.92 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.92 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.92 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.92 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.91 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.89 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.89 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.84 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.84 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.76 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.75 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.74 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.74 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.74 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.74 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.72 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.71 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.7 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.68 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.67 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.67 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.56 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.48 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.47 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.47 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.46 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.45 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.45 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.44 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.43 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.42 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.28 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.26 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.2 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.18 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.33 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.24 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.96 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.62 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.51 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.49 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.98 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.72 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.66 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.55 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 93.69 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 91.97 |
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=1e-42 Score=364.06 Aligned_cols=290 Identities=32% Similarity=0.506 Sum_probs=233.6
Q ss_pred CCCHHHHHHHHHHHHhCCCC--CCCCCCCCCCCC-CCcceeecC----CCEeEEEcCCCCcccccccCCccCccccccCC
Q 035786 21 LDSAVQRSALLDLRSSLGLR--SRDWPLRTEPCR-SWRGVQCQN----GQVIAINISGFKRTRIGRLNPRFAVDSLGNLT 93 (693)
Q Consensus 21 ~~~~~~~~aLl~~k~~l~~~--~~~W~~~~~~C~-~W~gv~C~~----~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~ 93 (693)
.|.++||+||++||+++.++ .++|..++|+|. .|.||+|+. +||++|+|++.
T Consensus 2 ~c~~~e~~aLl~~k~~~~~~~~l~sW~~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~--------------------- 60 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGL--------------------- 60 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECC---------------------
T ss_pred CCCHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCCCcCCCeEEeCCCCcEEEEEEECCCC---------------------
Confidence 58999999999999999764 478987777662 599999973 37888887764
Q ss_pred CCCEEEccCCCCCC--cCchHhhhCCCCccEEEecC-CCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCE
Q 035786 94 LLSSFNASGLSLPG--SIPEWFGYRLPALQVLDLRS-CSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSN 170 (693)
Q Consensus 94 ~L~~L~ls~~~l~g--~ip~~~~~~l~~L~~L~Ls~-n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 170 (693)
.+.| .+|+.++. |++|++|+|++ |+++|.+|.+|++|++|++|+|++|++.+..|..+..+.+|++
T Consensus 61 ----------~l~g~~~lp~~l~~-L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 61 ----------NLPKPYPIPSSLAN-LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp ----------CCSSCEECCGGGGG-CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ----------CCCCCCCCChHHhc-Cccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 3333 46777764 88888888876 7888888888888888888888888888888888888888888
Q ss_pred EEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCC-CEEEccCCcccccCCccccCCCCCCEEEccCCc
Q 035786 171 LDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSI-QFLNLSDNALTGFIPSEVGNLDKLIELDLSKNS 249 (693)
Q Consensus 171 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 249 (693)
++++.|.+.+.+|..+..+++|+.+++++|.++|.+|..+..+.++ +.+++++|++++..|..+.++..+ .++++.|.
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~ 208 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSE
T ss_pred cccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 8888888888888888888888888888888888888888877775 788888888888888888777544 68888888
Q ss_pred CcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCc
Q 035786 250 ISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPI 329 (693)
Q Consensus 250 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~ 329 (693)
+.+.+|..+..+++|+.+++++|.+.+.++. +..+++|+.|+|++|+++|.+|.++..+++|++|+|++|+|+|.+|.
T Consensus 209 ~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~--~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~ 286 (313)
T d1ogqa_ 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG--CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred ccccccccccccccccccccccccccccccc--cccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC
Confidence 8888888888888888888888888877653 46778888888888888888888888888888888888888888884
Q ss_pred cCcCCCCCCcEEEccCCc
Q 035786 330 LSTNGNASGAVFNISNNM 347 (693)
Q Consensus 330 ~~~~~~~~l~~l~ls~N~ 347 (693)
...+..|+.+++++|+
T Consensus 287 --~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 287 --GGNLQRFDVSAYANNK 302 (313)
T ss_dssp --STTGGGSCGGGTCSSS
T ss_pred --cccCCCCCHHHhCCCc
Confidence 2444555555565554
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-35 Score=302.35 Aligned_cols=166 Identities=21% Similarity=0.371 Sum_probs=144.8
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|...+.||+|+||.||+|++.+++.||||+++......++|.+|++++++++|||||+++|+|.+ +..++||||++
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~--~~~~iv~Ey~~ 90 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--EPIYIITEYME 90 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEEECCT
T ss_pred HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeecc--CCeEEEEEeCC
Confidence 3466778899999999999999988999999998776677889999999999999999999998853 56799999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.++++.... ..++|.++++|+.|||+||.|||+. +|+||||||+|||||+++.+||+|||+|+...+
T Consensus 91 ~g~L~~~~~~~~~------~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~ 161 (272)
T d1qpca_ 91 NGSLVDFLKTPSG------IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (272)
T ss_dssp TCBHHHHTTSHHH------HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred CCcHHHHHhhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccC
Confidence 9999998865321 3599999999999999999999998 999999999999999999999999999999865
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
......+...||+.|||
T Consensus 162 ~~~~~~~~~~gt~~y~A 178 (272)
T d1qpca_ 162 NEYTAREGAKFPIKWTA 178 (272)
T ss_dssp SCEECCTTCCCCTTTSC
T ss_pred CccccccccCCcccccC
Confidence 54433445667777776
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-35 Score=299.42 Aligned_cols=165 Identities=22% Similarity=0.361 Sum_probs=134.2
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|++.+++.||||++.......++|.+|++++++++|||||+++|+|.+ ++..++|||||++
T Consensus 6 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~~lv~E~~~~ 84 (263)
T d1sm2a_ 6 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEH 84 (263)
T ss_dssp CEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEECCTT
T ss_pred HcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceecc-CCceEEEEEecCC
Confidence 466678899999999999999989999999998777678899999999999999999999999976 4678999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDS 672 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~ 672 (693)
|+|.++++... ..++|.++.+|+.|||+||+|||+. +|+||||||+|||+|+++.+||+|||+++...+.
T Consensus 85 g~L~~~l~~~~-------~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~ 154 (263)
T d1sm2a_ 85 GCLSDYLRTQR-------GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 154 (263)
T ss_dssp CBHHHHHHTTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC--------
T ss_pred CcHHHHhhccc-------cCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCC
Confidence 99999987543 3589999999999999999999998 8999999999999999999999999999987554
Q ss_pred Ccceeeeeehhhhhhh
Q 035786 673 HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 673 ~~~~~~~~~~~~~y~a 688 (693)
.........||+.|+|
T Consensus 155 ~~~~~~~~~gt~~y~a 170 (263)
T d1sm2a_ 155 QYTSSTGTKFPVKWAS 170 (263)
T ss_dssp ----------CTTSCC
T ss_pred CceeecceecCcccCC
Confidence 4433444567777765
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.3e-35 Score=300.58 Aligned_cols=167 Identities=19% Similarity=0.365 Sum_probs=145.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
++|...+.||+|+||+||+|+.. +|+.||||+++......++|.+|+++|++++|||||+++|+|.+ ++..++|||||
T Consensus 17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~iv~E~~ 95 (287)
T d1opja_ 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFM 95 (287)
T ss_dssp GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEECC
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEee-CCeeEEEeecc
Confidence 34667789999999999999975 58899999998777777889999999999999999999999975 46789999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.++++.... ..++|..+..|+.|||+||+|||+. +||||||||+|||||+++.+||+|||+|+...
T Consensus 96 ~~g~l~~~l~~~~~------~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~ 166 (287)
T d1opja_ 96 TYGNLLDYLRECNR------QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 166 (287)
T ss_dssp TTCBHHHHHHHSCT------TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCC
T ss_pred cCcchHHHhhhccc------cchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecC
Confidence 99999999976432 4699999999999999999999998 99999999999999999999999999999986
Q ss_pred CCCcceeeeeehhhhhhh
Q 035786 671 DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~~~~~~~~~~y~a 688 (693)
.......+...|++.|+|
T Consensus 167 ~~~~~~~~~~~g~~~y~a 184 (287)
T d1opja_ 167 GDTYTAHAGAKFPIKWTA 184 (287)
T ss_dssp SSSSEEETTEEECGGGCC
T ss_pred CCCceeeccccccccccC
Confidence 554444444567777765
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.6e-35 Score=302.20 Aligned_cols=178 Identities=21% Similarity=0.352 Sum_probs=135.8
Q ss_pred CccCHHHHHHHhCCCCc---------cCccccCCeeeEEEEEeC-CC---cEEEEEEeccccc--CHHHHHHHHHHHhcC
Q 035786 500 DSFTYEQLLRATGNFSE---------TNLIKKGHSGDLFKGTLA-GG---TTVVVKKVSLHSF--KKESYMMELDLFSRV 564 (693)
Q Consensus 500 ~~~~~~~l~~at~~~~~---------~~~ig~G~~G~Vy~~~~~-~g---~~vavK~l~~~~~--~~~~f~~Ei~~l~~l 564 (693)
++++|+|+.+|+.+|+. .++||+|+||+||+|+.. +| ..||||++..... ..++|.+|+++|+++
T Consensus 5 d~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l 84 (299)
T d1jpaa_ 5 DPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF 84 (299)
T ss_dssp CGGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC
Confidence 45777888888776653 468999999999999974 33 3699999865332 246799999999999
Q ss_pred CCCCccceeEEEEcCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecC
Q 035786 565 SHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRD 644 (693)
Q Consensus 565 ~H~niv~l~g~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrD 644 (693)
+|||||+++|+|.+ ++..++|||||++|+|.++++... ..++|.++++|+.|||+||+|||+. +|||||
T Consensus 85 ~HpnIv~l~g~~~~-~~~~~iv~Ey~~~g~L~~~~~~~~-------~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrD 153 (299)
T d1jpaa_ 85 DHPNVIHLEGVVTK-STPVMIITEFMENGSLDSFLRQND-------GQFTVIQLVGMLRGIAAGMKYLADM---NYVHRD 153 (299)
T ss_dssp CCTTBCCEEEEECS-SSSCEEEEECCTTEEHHHHHHTTT-------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred CCCCCccEEEEEee-CCEEEEEEEecCCCcceeeecccc-------CCCCHHHHHHHHHHHHHHHHHHhhC---CCccCc
Confidence 99999999999975 467899999999999999987533 3599999999999999999999998 999999
Q ss_pred CCCCCeeeCCCCceEECCcccccccCCCCc----ceeeeeehhhhhhh
Q 035786 645 VQASSILLDDKFEVRLGSLSELHAQGDSHQ----NVLTRFLWRQLYQS 688 (693)
Q Consensus 645 lk~~NILld~~~~~ki~Dfgla~~~~~~~~----~~~~~~~~~~~y~a 688 (693)
|||+|||||+++++||+|||+++....... .......||+.|||
T Consensus 154 lKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~a 201 (299)
T d1jpaa_ 154 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 201 (299)
T ss_dssp CCGGGEEECTTCCEEECCC-----------------------CGGGSC
T ss_pred cccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccC
Confidence 999999999999999999999998733211 11222456777876
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-34 Score=293.34 Aligned_cols=163 Identities=20% Similarity=0.419 Sum_probs=135.0
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||+||+|++.+ .||||++..... ..+.|.+|++++++++|||||+++|+|.+ +..++|||
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~--~~~~lv~E 83 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--PQLAIVTQ 83 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEEEE
T ss_pred ccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec--cEEEEEEe
Confidence 457778899999999999999753 599999865432 25689999999999999999999998853 56899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
||++|+|.++++... ..++|.++++|+.|||+||+|||+. +||||||||+|||||+++.+||+|||+|+.
T Consensus 84 y~~~g~L~~~l~~~~-------~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~ 153 (276)
T d1uwha_ 84 WCEGSSLYHHLHIIE-------TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATV 153 (276)
T ss_dssp CCCEEEHHHHHHTSC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC
T ss_pred cCCCCCHHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceee
Confidence 999999999997543 3599999999999999999999988 999999999999999999999999999998
Q ss_pred cCCC-Ccceeeeeehhhhhhh
Q 035786 669 QGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~-~~~~~~~~~~~~~y~a 688 (693)
.... .....+...||+.|||
T Consensus 154 ~~~~~~~~~~~~~~gt~~y~A 174 (276)
T d1uwha_ 154 KSRWSGSHQFEQLSGSILWMA 174 (276)
T ss_dssp ------------CCCCGGGCC
T ss_pred ccccCCcccccccccCcccCC
Confidence 7432 2223455778999987
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-34 Score=287.65 Aligned_cols=166 Identities=19% Similarity=0.321 Sum_probs=147.6
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
++|+..+.||+|+||+||+|++++++.||||+++......++|.+|++++++++|||||+++|+|.+ ++..++||||++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~-~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECC-SSSEEEEEECCT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEee-CCceEEEEEccC
Confidence 4677889999999999999999989999999998877778899999999999999999999999975 467899999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.+++.... ..++|..+.+|+.|+|+||+|||+. +|+||||||+||++|+++.+||+|||+++...+
T Consensus 83 ~g~l~~~~~~~~-------~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 152 (258)
T d1k2pa_ 83 NGCLLNYLREMR-------HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 152 (258)
T ss_dssp TEEHHHHHHSGG-------GCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSS
T ss_pred CCcHHHhhhccc-------cCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccC
Confidence 999999987543 3589999999999999999999998 999999999999999999999999999998755
Q ss_pred CCcceeeeeehhhhhhh
Q 035786 672 SHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~~~~~~~~~~~y~a 688 (693)
......+...+|+.|+|
T Consensus 153 ~~~~~~~~~~~t~~y~a 169 (258)
T d1k2pa_ 153 DEYTSSVGSKFPVRWSP 169 (258)
T ss_dssp SSCCCCCCSCCCGGGCC
T ss_pred CCceeecccCCCCCcCC
Confidence 44444455678888876
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-34 Score=294.33 Aligned_cols=165 Identities=21% Similarity=0.349 Sum_probs=137.0
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|+.++++.||||+++......++|.+|++++++++|||||+++|+|.+ ++.++|||||++
T Consensus 18 ~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~--~~~~lv~Ey~~~ 95 (285)
T d1fmka3 18 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYMSK 95 (285)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCCTT
T ss_pred HEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEec--CCeEEEEEecCC
Confidence 477788999999999999999988899999998776667889999999999999999999999853 568999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDS 672 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~~ 672 (693)
|+|..+++.... ..++|.++++|+.|||.||+|||+. +|+||||||+|||||+++++||+|||+++.+.+.
T Consensus 96 g~l~~~~~~~~~------~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~ 166 (285)
T d1fmka3 96 GSLLDFLKGETG------KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 166 (285)
T ss_dssp CBHHHHHSHHHH------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred Cchhhhhhhccc------ccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCC
Confidence 999999875321 3599999999999999999999998 8999999999999999999999999999987555
Q ss_pred Ccceeeeeehhhhhhh
Q 035786 673 HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 673 ~~~~~~~~~~~~~y~a 688 (693)
.....+...||+.|+|
T Consensus 167 ~~~~~~~~~gt~~y~a 182 (285)
T d1fmka3 167 EYTARQGAKFPIKWTA 182 (285)
T ss_dssp ---------CCGGGSC
T ss_pred CceeeccccccccccC
Confidence 4444555667777775
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-34 Score=289.61 Aligned_cols=165 Identities=17% Similarity=0.254 Sum_probs=140.8
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|+..+.||+|+||+||+|+. .+|+.||||++..... ..+.|.+|++++++++|||||++++++.+ ++..++|||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~-~~~~~ivmE 83 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFLE 83 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CceeEEEEe
Confidence 3577788999999999999996 4699999999975432 24579999999999999999999999876 468899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+++|+|.++++.. ..+++.+...|+.|++.||+|||+. +||||||||+|||+++++.+||+|||+|+.
T Consensus 84 y~~gg~L~~~l~~~--------~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~ 152 (271)
T d1nvra_ 84 YCSGGELFDRIEPD--------IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATV 152 (271)
T ss_dssp CCTTEEGGGGSBTT--------TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred ccCCCcHHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhhee
Confidence 99999999999643 3489999999999999999999998 999999999999999999999999999998
Q ss_pred cCCC-Ccceeeeeehhhhhhh
Q 035786 669 QGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~-~~~~~~~~~~~~~y~a 688 (693)
.... .....+..+||+.|||
T Consensus 153 ~~~~~~~~~~~~~~GT~~Y~A 173 (271)
T d1nvra_ 153 FRYNNRERLLNKMCGTLPYVA 173 (271)
T ss_dssp CEETTEECCBCCCCSCGGGSC
T ss_pred eccCCccccccceeeCcCccC
Confidence 7332 2233456789999987
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.98 E-value=6.2e-33 Score=289.22 Aligned_cols=252 Identities=29% Similarity=0.467 Sum_probs=229.3
Q ss_pred CCccEEEecCCCCCc--CCCcccCCCccCCEEeccc-CcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCe
Q 035786 118 PALQVLDLRSCSLSG--SIPGSFGNLSRLNVLYLSG-NSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTR 194 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 194 (693)
.+++.|||++|.++| .+|.++++|++|++|+|++ |+++|.+|++|++|++|++|+|++|++.+..|..+..+.+|+.
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 468899999999998 5899999999999999997 8999999999999999999999999999999999999999999
Q ss_pred eecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCC-CEEEccCCcCcccCchhhhcCcccccccccccc
Q 035786 195 LNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKL-IELDLSKNSISGSLPLELRGLRNLAKLVISENG 273 (693)
Q Consensus 195 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 273 (693)
++++.|.+.+.+|..+.++++|+.+++++|.++|.+|..+..+..+ +.+++++|++++..|..+..+..+ .+++++|.
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~ 208 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSE
T ss_pred cccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 9999999999999999999999999999999999999999998886 889999999999999999887655 69999999
Q ss_pred ccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecC
Q 035786 274 LEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLN 353 (693)
Q Consensus 274 l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~ 353 (693)
+.|.+|.. +..+++|+.+++++|.+++.+| .+..+++|+.|+|++|+|+|.+|. .+..+++|++|+|++|+|+|.+|
T Consensus 209 ~~~~~~~~-~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~-~l~~L~~L~~L~Ls~N~l~g~iP 285 (313)
T d1ogqa_ 209 LEGDASVL-FGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQ-GLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp EEECCGGG-CCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCG-GGGGCTTCCEEECCSSEEEEECC
T ss_pred cccccccc-cccccccccccccccccccccc-ccccccccccccCccCeecccCCh-HHhCCCCCCEEECcCCcccccCC
Confidence 99888765 4788999999999999998766 578889999999999999999996 46778999999999999999998
Q ss_pred C-CCCCCCCEEEccCCc-ceee
Q 035786 354 S-SSFRKFSLIDLSSNY-FQGT 373 (693)
Q Consensus 354 ~-~~~~~l~~ldLs~N~-l~g~ 373 (693)
. ..+++|+.+++++|+ ++|.
T Consensus 286 ~~~~L~~L~~l~l~~N~~l~g~ 307 (313)
T d1ogqa_ 286 QGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CSTTGGGSCGGGTCSSSEEEST
T ss_pred CcccCCCCCHHHhCCCccccCC
Confidence 7 567888888999987 4553
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=3.3e-33 Score=285.57 Aligned_cols=158 Identities=20% Similarity=0.301 Sum_probs=131.2
Q ss_pred CccccCCeeeEEEEEeCC---CcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 518 NLIKKGHSGDLFKGTLAG---GTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~---g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
+.||+|+||+||+|.+.+ ++.||||+++..... .++|.+|+++|++++|||||+++|+|.+ +..++|||||+
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~--~~~~lvmE~~~ 90 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--ESWMLVMEMAE 90 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES--SSEEEEEECCT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc--CCEEEEEEcCC
Confidence 579999999999998743 568999999653322 4679999999999999999999999853 45789999999
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
+|+|.++++.. ..++|.++++|+.|||+||+|||+. +||||||||+|||+++++.+||+|||+++....
T Consensus 91 ~g~L~~~l~~~--------~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~ 159 (277)
T d1xbba_ 91 LGPLNKYLQQN--------RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 159 (277)
T ss_dssp TEEHHHHHHHC--------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred CCcHHHHHhhc--------cCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhccc
Confidence 99999999753 3499999999999999999999988 899999999999999999999999999998744
Q ss_pred CCcc--eeeeeehhhhhhh
Q 035786 672 SHQN--VLTRFLWRQLYQS 688 (693)
Q Consensus 672 ~~~~--~~~~~~~~~~y~a 688 (693)
.... ......||+.|||
T Consensus 160 ~~~~~~~~~~~~gt~~y~A 178 (277)
T d1xbba_ 160 DENYYKAQTHGKWPVKWYA 178 (277)
T ss_dssp TCSEEEC----CCCGGGCC
T ss_pred cccccccccccCCCceecC
Confidence 3322 2334568888887
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.2e-32 Score=283.26 Aligned_cols=163 Identities=20% Similarity=0.321 Sum_probs=142.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
++|...+.||+|+||+||+|+. .+|+.||||++..... ..+.|.+|++++++++|||||++++++.+ ++..++||||
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~ivmEy 98 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEY 98 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEE-CCEEEEEEEe
Confidence 3578888999999999999985 5699999999975443 36779999999999999999999999876 4689999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|+|.+++.+ ..+++.+...|+.|++.||+|||+. +||||||||+|||++.++++||+|||+|+..
T Consensus 99 ~~gg~L~~~~~~---------~~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~ 166 (293)
T d1yhwa1 99 LAGGSLTDVVTE---------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (293)
T ss_dssp CTTCBHHHHHHH---------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred cCCCcHHHHhhc---------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheee
Confidence 999999998864 2489999999999999999999998 9999999999999999999999999999987
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
...... ....+||+.|||
T Consensus 167 ~~~~~~-~~~~~gt~~Y~a 184 (293)
T d1yhwa1 167 TPEQSK-RSTMVGTPYWMA 184 (293)
T ss_dssp CSTTCC-BCCCCSCGGGCC
T ss_pred cccccc-ccccccCCCccC
Confidence 443322 345678999886
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=4.1e-33 Score=285.81 Aligned_cols=163 Identities=19% Similarity=0.303 Sum_probs=135.5
Q ss_pred CCccCc-cccCCeeeEEEEEeC---CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 514 FSETNL-IKKGHSGDLFKGTLA---GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 514 ~~~~~~-ig~G~~G~Vy~~~~~---~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
|...++ ||+|+||+||+|++. ++..||||+++..... .++|.+|+++|++++|||||+++|+|.+ +..++||
T Consensus 10 ~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~~lvm 87 (285)
T d1u59a_ 10 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVM 87 (285)
T ss_dssp EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEEEEE
T ss_pred eEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc--CeEEEEE
Confidence 344453 999999999999864 3568999999754332 4689999999999999999999999863 4689999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
|||++|+|.+++.... ..++|.++.+|+.|||+||+|||+. +||||||||+|||+++++.+||+|||+++
T Consensus 88 E~~~~g~L~~~l~~~~-------~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~ 157 (285)
T d1u59a_ 88 EMAGGGPLHKFLVGKR-------EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSK 157 (285)
T ss_dssp ECCTTEEHHHHHTTCT-------TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EeCCCCcHHHHhhccc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhh
Confidence 9999999999986432 3599999999999999999999998 99999999999999999999999999999
Q ss_pred ccCCCCcc--eeeeeehhhhhhh
Q 035786 668 AQGDSHQN--VLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~--~~~~~~~~~~y~a 688 (693)
........ ..+...||+.|||
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~a 180 (285)
T d1u59a_ 158 ALGADDSYYTARSAGKWPLKWYA 180 (285)
T ss_dssp ECTTCSCEECCCCSSCCCGGGCC
T ss_pred cccccccccccccccccCccccC
Confidence 87443222 2333557777776
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=4.5e-33 Score=285.81 Aligned_cols=165 Identities=19% Similarity=0.316 Sum_probs=131.3
Q ss_pred CCCccCccccCCeeeEEEEEeCCC-----cEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGG-----TTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g-----~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
.|+..++||+|+||+||+|++.+. ..||||++...... .++|.+|++++++++|||||+++|+|.+ ++..++
T Consensus 8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~-~~~~~~ 86 (283)
T d1mqba_ 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-YKPMMI 86 (283)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEE
T ss_pred HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEec-CCceEE
Confidence 467789999999999999997542 47999999654332 4579999999999999999999999976 467899
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|||||++|++.+++.... ..++|.++++|+.|||.||+|||+. +||||||||+|||||+++.+||+|||+
T Consensus 87 v~e~~~~~~l~~~~~~~~-------~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGl 156 (283)
T d1mqba_ 87 ITEYMENGALDKFLREKD-------GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGL 156 (283)
T ss_dssp EEECCTTEEHHHHHHHTT-------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred EEEecccCcchhhhhccc-------ccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccch
Confidence 999999999999886533 3599999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCC--cceeeeeehhhhhhh
Q 035786 666 LHAQGDSH--QNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~--~~~~~~~~~~~~y~a 688 (693)
++.+.+.. ........||+.|||
T Consensus 157 a~~~~~~~~~~~~~~~~~gt~~Y~A 181 (283)
T d1mqba_ 157 SRVLEDDPEATYTTSGGKIPIRWTA 181 (283)
T ss_dssp -----------------CCCGGGSC
T ss_pred hhcccCCCccceEeccCCCCccccC
Confidence 99874322 222334567777876
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.1e-33 Score=293.71 Aligned_cols=163 Identities=23% Similarity=0.345 Sum_probs=138.9
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|+..+.||+|+||+||+|+. .+|+.||||+++..... .+++.+|+++|++++|||||+++++|.+ ++..++|||
T Consensus 6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~~~iVmE 84 (322)
T d1s9ja_ 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICME 84 (322)
T ss_dssp GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEE
Confidence 4677888999999999999996 57999999999754332 5679999999999999999999999986 468999999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
||++|+|.+++++.. .+++.....++.|+++||.|||+.+ +||||||||+|||+++++.+||+|||+|+.
T Consensus 85 y~~gg~L~~~l~~~~--------~l~~~~~~~~~~qil~aL~yLH~~~--~IiHRDiKP~NILl~~~~~vkl~DFGla~~ 154 (322)
T d1s9ja_ 85 HMDGGSLDQVLKKAG--------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154 (322)
T ss_dssp CCTTEEHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHH
T ss_pred cCCCCcHHHHHhhcC--------CCCHHHHHHHHHHHHHHHHHHHHhC--CEEccccCHHHeeECCCCCEEEeeCCCccc
Confidence 999999999997542 4899999999999999999999631 799999999999999999999999999998
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
+.+.. .+.++||++|||
T Consensus 155 ~~~~~---~~~~~GT~~Y~A 171 (322)
T d1s9ja_ 155 LIDSM---ANSFVGTRSYMS 171 (322)
T ss_dssp HHHHT---C---CCSSCCCC
T ss_pred cCCCc---cccccCCccccC
Confidence 73322 234678888876
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.5e-33 Score=285.15 Aligned_cols=172 Identities=23% Similarity=0.331 Sum_probs=130.5
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC-CCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH-ETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~~lv 586 (693)
++|+..+.||+|+||+||+|+. .+|+.||||++...... .+.|.+|++++++++|||||++++++.+. ++..|+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 4577788999999999999986 56999999999765433 45799999999999999999999998753 3457899
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC--CCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC--NPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~--~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
|||+++|+|.+++.+... ....+++.....++.|++.||+|||+.. ..+||||||||+|||+++++.+||+|||
T Consensus 84 mEy~~~g~L~~~i~~~~~----~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG 159 (269)
T d2java1 84 MEYCEGGDLASVITKGTK----ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 159 (269)
T ss_dssp EECCTTEEHHHHHHHHHH----HTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHH
T ss_pred EecCCCCcHHHHHHhccc----cCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecc
Confidence 999999999999974321 1145999999999999999999999752 2369999999999999999999999999
Q ss_pred cccccCCCCcceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+|+........ .+..+||+.|||
T Consensus 160 ~a~~~~~~~~~-~~~~~gt~~Y~A 182 (269)
T d2java1 160 LARILNHDTSF-AKAFVGTPYYMS 182 (269)
T ss_dssp HHHHC------------CCCSCCC
T ss_pred ceeecccCCCc-cccCCCCcccCC
Confidence 99987543322 344678888876
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-32 Score=278.15 Aligned_cols=161 Identities=19% Similarity=0.269 Sum_probs=140.7
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||+||+|+.. +|+.||||++.... ...+.+.+|++++++++|||||++++++.+ ++..++||
T Consensus 7 dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~ivm 85 (263)
T d2j4za1 7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYLIL 85 (263)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred HeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEE-CCEEEEEE
Confidence 4777889999999999999974 68999999986422 235679999999999999999999999875 46889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++.... .+++.....|+.||++||+|||+. +||||||||+|||+++++.+||+|||+|+
T Consensus 86 Ey~~~g~L~~~l~~~~--------~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~ 154 (263)
T d2j4za1 86 EYAPLGTVYRELQKLS--------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV 154 (263)
T ss_dssp ECCTTCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCS
T ss_pred eecCCCcHHHHHhhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceee
Confidence 9999999999997543 489999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
...... ....+||+.|||
T Consensus 155 ~~~~~~---~~~~~Gt~~Y~A 172 (263)
T d2j4za1 155 HAPSSR---RTTLCGTLDYLP 172 (263)
T ss_dssp CCCCCC---CEETTEEGGGCC
T ss_pred ecCCCc---ccccCCCCcccC
Confidence 874433 344678899987
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.97 E-value=1.8e-32 Score=284.17 Aligned_cols=158 Identities=23% Similarity=0.368 Sum_probs=137.5
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
|+..+.||+|+||+||+|+. .+|+.||||++...... .+.|.+|+++|++++|||||+++++|.+ ++..++|||
T Consensus 17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~iv~E 95 (309)
T d1u5ra_ 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLVME 95 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEE-CCEEEEEEE
Confidence 77788999999999999985 57899999999765433 3578999999999999999999999876 468999999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
||++|+|..++... ..++|.+...|+.||+.||+|||+. +||||||||+|||+++++.+||+|||+|+.
T Consensus 96 ~~~~g~l~~~~~~~--------~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~ 164 (309)
T d1u5ra_ 96 YCLGSASDLLEVHK--------KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI 164 (309)
T ss_dssp CCSEEHHHHHHHHT--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBS
T ss_pred ecCCCchHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccc
Confidence 99999998766542 3599999999999999999999998 999999999999999999999999999998
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
...... .+||+.|||
T Consensus 165 ~~~~~~-----~~GT~~Y~A 179 (309)
T d1u5ra_ 165 MAPANS-----FVGTPYWMA 179 (309)
T ss_dssp SSSBCC-----CCSCGGGCC
T ss_pred cCCCCc-----cccCccccC
Confidence 754433 467777776
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=9e-33 Score=283.71 Aligned_cols=164 Identities=18% Similarity=0.320 Sum_probs=138.0
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
.|+..+.||+|+||+||+|+. .+|+.||||++..... ..+.|.+|+++|++++|||||++++++.+ ++..++|||||
T Consensus 13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~lvmEy~ 91 (288)
T d2jfla1 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-ENNLWILIEFC 91 (288)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEECC
T ss_pred CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCeEEEEEecC
Confidence 356678899999999999996 4689999999976433 35689999999999999999999999876 46899999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.+++.+.. ..+++.+...|+.|++.||+|||+. +||||||||+|||++.++++||+|||+|+...
T Consensus 92 ~~g~L~~~~~~~~-------~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~ 161 (288)
T d2jfla1 92 AGGAVDAVMLELE-------RPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 161 (288)
T ss_dssp TTEEHHHHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECH
T ss_pred CCCcHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccC
Confidence 9999999987532 3599999999999999999999998 99999999999999999999999999998763
Q ss_pred CCCcceeeeeehhhhhhh
Q 035786 671 DSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~~~~~~~~~~~~y~a 688 (693)
..... ....+||+.|||
T Consensus 162 ~~~~~-~~~~~Gt~~y~A 178 (288)
T d2jfla1 162 RTIQR-RDSFIGTPYWMA 178 (288)
T ss_dssp HHHHH-HTCCCSCCTTCC
T ss_pred CCccc-ccccccccccCC
Confidence 22111 223456666665
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.7e-32 Score=276.43 Aligned_cols=161 Identities=18% Similarity=0.295 Sum_probs=135.3
Q ss_pred ccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC---CCeeEEEEc
Q 035786 516 ETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH---ETEKLLVYK 588 (693)
Q Consensus 516 ~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~---~~~~~lv~e 588 (693)
..+.||+|+||+||+|+.. +++.||||++...... .+.|.+|+++|++++|||||+++++|.+. +...++|||
T Consensus 13 ~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE 92 (270)
T d1t4ha_ 13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 92 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEe
Confidence 3457999999999999974 6889999998754322 45799999999999999999999988542 235789999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC-CCCceEECCccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD-DKFEVRLGSLSELH 667 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld-~~~~~ki~Dfgla~ 667 (693)
|+++|+|.+++++. ..+++.....++.||++||+|||++ .++||||||||+|||++ +++.+||+|||+|+
T Consensus 93 ~~~~g~L~~~l~~~--------~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~ 163 (270)
T d1t4ha_ 93 LMTSGTLKTYLKRF--------KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 163 (270)
T ss_dssp CCCSCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred CCCCCcHHHHHhcc--------ccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcce
Confidence 99999999999764 2489999999999999999999986 34599999999999996 57899999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
...... ....+||+.|||
T Consensus 164 ~~~~~~---~~~~~GT~~Y~a 181 (270)
T d1t4ha_ 164 LKRASF---AKAVIGTPEFMA 181 (270)
T ss_dssp GCCTTS---BEESCSSCCCCC
T ss_pred eccCCc---cCCcccCccccC
Confidence 764332 345678999987
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.3e-32 Score=283.07 Aligned_cols=165 Identities=21% Similarity=0.277 Sum_probs=132.1
Q ss_pred CCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCC---eeEEEEccC
Q 035786 514 FSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHET---EKLLVYKYM 590 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~---~~~lv~ey~ 590 (693)
+...+.||+|+||.||+|++ +|+.||||+++........+..|+..+.+++|||||+++|+|.+.+. ..++|||||
T Consensus 5 ~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~ 83 (303)
T d1vjya_ 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecc
Confidence 44567899999999999997 58899999996543322233445555668899999999999986432 478999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC-----CCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC-----NPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~-----~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
++|+|.++|++ ..++|.++.+++.++|.||+|+|+.+ .++||||||||+|||||+++.+||+|||+
T Consensus 84 ~~g~L~~~l~~---------~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl 154 (303)
T d1vjya_ 84 EHGSLFDYLNR---------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp TTCBHHHHHHH---------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred cCCCHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCc
Confidence 99999999985 24899999999999999999999742 46899999999999999999999999999
Q ss_pred ccccCCCC---cceeeeeehhhhhhh
Q 035786 666 LHAQGDSH---QNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~---~~~~~~~~~~~~y~a 688 (693)
++...... ........||+.|||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~gt~~y~a 180 (303)
T d1vjya_ 155 AVRHDSATDTIDIAPNHRVGTKRYMA 180 (303)
T ss_dssp CEEEETTTTEECC----CCSCGGGCC
T ss_pred cccccCCCcceeccccceecccCcCC
Confidence 99873322 222445678888887
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.2e-32 Score=279.46 Aligned_cols=164 Identities=19% Similarity=0.282 Sum_probs=138.7
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...++||+|+||+||+|+. .+|+.||||++.... ...+.|.+|++++++++|||||++++++.+ ++..|+||
T Consensus 9 dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~ivm 87 (288)
T d1uu3a_ 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-DEKLYFGL 87 (288)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEEC-SSEEEEEE
T ss_pred CCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEE-CCEEEEEE
Confidence 477788999999999999996 569999999986432 235679999999999999999999998875 56889999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++.... .+++.....++.|++.||+|||+. +||||||||+|||+++++.+||+|||+|+
T Consensus 88 Ey~~gg~L~~~~~~~~--------~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~ 156 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKIG--------SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAK 156 (288)
T ss_dssp CCCTTEEHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EccCCCCHHHhhhccC--------CCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccce
Confidence 9999999999987543 489999999999999999999998 99999999999999999999999999999
Q ss_pred ccCCC-Ccceeeeeehhhhhhh
Q 035786 668 AQGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~-~~~~~~~~~~~~~y~a 688 (693)
.+... .....+..+||+.|||
T Consensus 157 ~~~~~~~~~~~~~~~GT~~Y~A 178 (288)
T d1uu3a_ 157 VLSPESKQARANSFVGTAQYVS 178 (288)
T ss_dssp ECC----------CCCCGGGCC
T ss_pred ecccCCcccccccccCCccccC
Confidence 87433 2323455789999987
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.97 E-value=2.3e-32 Score=283.08 Aligned_cols=175 Identities=21% Similarity=0.293 Sum_probs=141.6
Q ss_pred HhCCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCC
Q 035786 510 ATGNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHET 581 (693)
Q Consensus 510 at~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~ 581 (693)
..++|+..+.||+|+||+||+|++. +++.||||+++..... .++|.+|++++++++|||||+++++|.+ ++
T Consensus 11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~-~~ 89 (301)
T d1lufa_ 11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV-GK 89 (301)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SS
T ss_pred CHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeecc-CC
Confidence 4567888999999999999999863 3578999999754332 5679999999999999999999999975 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCC----------------CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDL----------------EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDV 645 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~----------------~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDl 645 (693)
..++||||+++|+|.++++..... .......++|.++++|+.|+|.||+|||.. +||||||
T Consensus 90 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrDl 166 (301)
T d1lufa_ 90 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 166 (301)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeEE
Confidence 889999999999999999753210 011224589999999999999999999988 9999999
Q ss_pred CCCCeeeCCCCceEECCcccccccCCC-Ccceeeeeehhhhhhh
Q 035786 646 QASSILLDDKFEVRLGSLSELHAQGDS-HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 646 k~~NILld~~~~~ki~Dfgla~~~~~~-~~~~~~~~~~~~~y~a 688 (693)
||+|||+|.++++||+|||+++...+. .....+...+++.|+|
T Consensus 167 Kp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~a 210 (301)
T d1lufa_ 167 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMP 210 (301)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCC
T ss_pred cccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCC
Confidence 999999999999999999999976332 2223344667777776
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.1e-32 Score=283.47 Aligned_cols=173 Identities=23% Similarity=0.356 Sum_probs=138.2
Q ss_pred CCCCccCccccCCeeeEEEEEeCC------CcEEEEEEecccc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAG------GTTVVVKKVSLHS--FKKESYMMELDLFSRV-SHARLVPLLGQCLEHETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~------g~~vavK~l~~~~--~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 582 (693)
++|...++||+|+||+||+|+..+ ...||||++.... ...+.|.+|+++|.++ +|||||+++|+|.+ ++.
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~-~~~ 115 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-SGP 115 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSS
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEee-CCe
Confidence 457777899999999999998642 2369999986533 2356799999999998 89999999999975 467
Q ss_pred eEEEEccCCCCChhhhhhccCCCC---------------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLE---------------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQA 647 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~---------------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~ 647 (693)
.++|||||++|+|.++|+...... ......++|..++.|+.|||+||+|||+. +||||||||
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp 192 (325)
T d1rjba_ 116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAA 192 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSG
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCch
Confidence 899999999999999998643210 01124589999999999999999999998 999999999
Q ss_pred CCeeeCCCCceEECCcccccccCCCCc-ceeeeeehhhhhhh
Q 035786 648 SSILLDDKFEVRLGSLSELHAQGDSHQ-NVLTRFLWRQLYQS 688 (693)
Q Consensus 648 ~NILld~~~~~ki~Dfgla~~~~~~~~-~~~~~~~~~~~y~a 688 (693)
+|||++.++.+||+|||+|+....... ...+...||+.|||
T Consensus 193 ~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~a 234 (325)
T d1rjba_ 193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMA 234 (325)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCC
T ss_pred hccccccCCeEEEeeccccccccCCCceeeeccccCCCccCC
Confidence 999999999999999999998744332 23445667888887
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-31 Score=277.83 Aligned_cols=162 Identities=25% Similarity=0.402 Sum_probs=134.7
Q ss_pred cCccccCCeeeEEEEEeCCC----cEEEEEEeccccc--CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 517 TNLIKKGHSGDLFKGTLAGG----TTVVVKKVSLHSF--KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~g----~~vavK~l~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
.++||+|+||+||+|++.++ ..||||+++.... ..++|.+|+++|++++|||||+++|+|.+.++..++|||||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~ 111 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence 46899999999999997542 3699999974322 24689999999999999999999999987666889999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccC
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQG 670 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~ 670 (693)
++|+|.++++... ..++|..+++++.|+|+||.|||+. +|+||||||+|||+|+++.+||+|||+++...
T Consensus 112 ~~g~l~~~~~~~~-------~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~ 181 (311)
T d1r0pa_ 112 KHGDLRNFIRNET-------HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 181 (311)
T ss_dssp TTCBHHHHHHCTT-------CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTT
T ss_pred ecCchhhhhcccc-------ccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhcc
Confidence 9999999987533 3588999999999999999999988 99999999999999999999999999999873
Q ss_pred CCCc---ceeeeeehhhhhhh
Q 035786 671 DSHQ---NVLTRFLWRQLYQS 688 (693)
Q Consensus 671 ~~~~---~~~~~~~~~~~y~a 688 (693)
.... ...+...||+.|+|
T Consensus 182 ~~~~~~~~~~~~~~gt~~y~a 202 (311)
T d1r0pa_ 182 DKEFDSVHNKTGAKLPVKWMA 202 (311)
T ss_dssp TTTCCCTTCTTCSSCCGGGSC
T ss_pred ccccccceecccccccccccC
Confidence 3221 12233456777765
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=99.97 E-value=2.5e-31 Score=280.28 Aligned_cols=164 Identities=18% Similarity=0.237 Sum_probs=141.9
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
++|...+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++++++|||||++++++.+ ++..++||||
T Consensus 26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~ivmE~ 104 (350)
T d1koaa2 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-DNEMVMIYEF 104 (350)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEE-TTEEEEEECC
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEEc
Confidence 3577788999999999999996 57999999999654332 5678999999999999999999998876 5789999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC--CCCceEECCccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD--DKFEVRLGSLSELH 667 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld--~~~~~ki~Dfgla~ 667 (693)
|++|+|.+++.... ..+++.....|+.||+.||+|||+. +||||||||+|||++ .++.+||+|||+++
T Consensus 105 ~~gg~L~~~l~~~~-------~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~ 174 (350)
T d1koaa2 105 MSGGELFEKVADEH-------NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTA 174 (350)
T ss_dssp CCSCBHHHHHTCTT-------SCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCE
T ss_pred CCCCCHHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchhe
Confidence 99999999996432 3599999999999999999999998 999999999999996 46789999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... ....+||++|||
T Consensus 175 ~~~~~~~--~~~~~gT~~Y~a 193 (350)
T d1koaa2 175 HLDPKQS--VKVTTGTAEFAA 193 (350)
T ss_dssp ECCTTSC--EEEECSCTTTCC
T ss_pred ecccccc--cceecCcccccC
Confidence 8755443 455788999987
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.3e-31 Score=278.82 Aligned_cols=164 Identities=18% Similarity=0.193 Sum_probs=142.3
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...++||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||++++++.+ ++..|+|
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~~~~iv 83 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecc-ccccccc
Confidence 3578889999999999999996 579999999997532 235678999999999999999999998875 4689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
||||++|+|.++++... .++......++.|++.||+|||+. +||||||||+|||+|+++.+||+|||+|
T Consensus 84 ~ey~~gg~L~~~~~~~~--------~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a 152 (337)
T d1o6la_ 84 MEYANGGELFFHLSRER--------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLC 152 (337)
T ss_dssp EECCTTCBHHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred eeccCCCchhhhhhccc--------CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccc
Confidence 99999999999998643 478888889999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+........ ....+||++|||
T Consensus 153 ~~~~~~~~~-~~~~~GT~~Y~a 173 (337)
T d1o6la_ 153 KEGISDGAT-MKTFCGTPEYLA 173 (337)
T ss_dssp BCSCCTTCC-BCCCEECGGGCC
T ss_pred cccccCCcc-cccceeCHHHhh
Confidence 986443322 455789999987
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.97 E-value=1.5e-31 Score=277.15 Aligned_cols=163 Identities=13% Similarity=0.202 Sum_probs=124.1
Q ss_pred CCCCccCccccCCeeeEEEEEeC-CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA-GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~-~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
+.|...+.||+|+||+||+|+.. +|+.||||++...... .+.|.+|+++|++++|||||++++++.+ ++..|+|||
T Consensus 9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~~~lvmE 87 (307)
T d1a06a_ 9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYES-GGHLYLIMQ 87 (307)
T ss_dssp GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEe
Confidence 34777889999999999999964 6899999999754322 4568899999999999999999998875 568999999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC---CCCceEECCccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD---DKFEVRLGSLSE 665 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld---~~~~~ki~Dfgl 665 (693)
||++|+|.+++... ..+++.....|+.|++.||+|||+. +||||||||+|||+. +++.+||+|||+
T Consensus 88 ~~~gg~L~~~l~~~--------~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~ 156 (307)
T d1a06a_ 88 LVSGGELFDRIVEK--------GFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGL 156 (307)
T ss_dssp CCCSCBHHHHHHTC--------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC--
T ss_pred ccCCCcHHHhhhcc--------cCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccce
Confidence 99999999999753 3499999999999999999999998 999999999999994 578999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... ....+||+.|||
T Consensus 157 a~~~~~~~~--~~~~~GT~~y~A 177 (307)
T d1a06a_ 157 SKMEDPGSV--LSTACGTPGYVA 177 (307)
T ss_dssp ------------------CTTSC
T ss_pred eEEccCCCe--eeeeeeCccccC
Confidence 998744332 344678888887
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6.2e-32 Score=273.52 Aligned_cols=148 Identities=24% Similarity=0.409 Sum_probs=124.9
Q ss_pred CCCccCccccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVC 592 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~~ 592 (693)
+|...+.||+|+||.||+|++. |+.||||+++... ..++|.+|++++++++|||||+++|+|.+.++..++||||+++
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~-~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~ 85 (262)
T d1byga_ 8 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 85 (262)
T ss_dssp GEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTT
T ss_pred HeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCC
Confidence 3566788999999999999985 7899999996533 3567999999999999999999999998655567999999999
Q ss_pred CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccccCC
Q 035786 593 GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGD 671 (693)
Q Consensus 593 GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~~~ 671 (693)
|+|.++|+.... ..++|..+++|+.|||.||+|||+. +||||||||+|||++.++.+|++|||+++....
T Consensus 86 g~L~~~l~~~~~------~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~ 155 (262)
T d1byga_ 86 GSLVDYLRSRGR------SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 155 (262)
T ss_dssp EEHHHHHHHHHH------HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred CCHHHHHHhcCC------CCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCC
Confidence 999999975321 3489999999999999999999988 999999999999999999999999999998643
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.7e-31 Score=277.03 Aligned_cols=164 Identities=20% Similarity=0.328 Sum_probs=134.2
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCc----EEEEEEecccc--cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGT----TVVVKKVSLHS--FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~----~vavK~l~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~l 585 (693)
+|+..++||+|+||+||+|++. +|+ .||||++.... ...++|.+|++++++++|||||+++|+|.+ +..++
T Consensus 10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~~ 87 (317)
T d1xkka_ 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQL 87 (317)
T ss_dssp TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEEE
T ss_pred HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCeeE
Confidence 4778899999999999999864 444 69999986432 236789999999999999999999999975 46789
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|+||+.+|+|.+++.... ..++|..+++|+.|||+||+|||+. +||||||||+|||+|+++.+||+|||+
T Consensus 88 v~e~~~~~~l~~~~~~~~-------~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGl 157 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 157 (317)
T ss_dssp EEECCTTCBHHHHHHHTS-------SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSH
T ss_pred EEEeccCCcccccccccc-------cCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeecccc
Confidence 999999999999987643 3599999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcc-eeeeeehhhhhhh
Q 035786 666 LHAQGDSHQN-VLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~-~~~~~~~~~~y~a 688 (693)
|+........ ......||+.|||
T Consensus 158 a~~~~~~~~~~~~~~~~gt~~y~A 181 (317)
T d1xkka_ 158 AKLLGAEEKEYHAEGGKVPIKWMA 181 (317)
T ss_dssp HHHTTTTCC--------CCTTTSC
T ss_pred ceecccccccccccccccCccccC
Confidence 9987443322 2333567888877
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.7e-31 Score=272.54 Aligned_cols=164 Identities=22% Similarity=0.303 Sum_probs=127.0
Q ss_pred CCCccCccccCCeeeEEEEEeCC----CcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG----GTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~----g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
+|...+.||+|+||.||+|+... +..||||+++..... .+.|.+|++++++++|||||+++|+|. ++..++|
T Consensus 8 ~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~--~~~~~iv 85 (273)
T d1mp8a_ 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWII 85 (273)
T ss_dssp GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSCEEE
T ss_pred HeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--cCeEEEE
Confidence 46677899999999999998742 457999998653332 567999999999999999999999985 3578999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
|||+++|+|.+++.... ..++|.++..++.||++||+|||+. +||||||||+||++++++.+||+|||+|
T Consensus 86 ~E~~~~g~l~~~~~~~~-------~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a 155 (273)
T d1mp8a_ 86 MELCTLGELRSFLQVRK-------YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 155 (273)
T ss_dssp EECCTTEEHHHHHHHTT-------TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----
T ss_pred EEeccCCcHHhhhhccC-------CCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhh
Confidence 99999999999886533 3589999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+..........+...||++|+|
T Consensus 156 ~~~~~~~~~~~~~~~gt~~y~a 177 (273)
T d1mp8a_ 156 RYMEDSTYYKASKGKLPIKWMA 177 (273)
T ss_dssp ---------------CCGGGCC
T ss_pred eeccCCcceeccceecCcccch
Confidence 9875544444556678888886
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.4e-31 Score=277.12 Aligned_cols=174 Identities=18% Similarity=0.237 Sum_probs=132.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 582 (693)
++|...+.||+|+||+||+|+.. +++.||||+++..... .+.|.+|++.+.++ +|+|||.++++|.+.+..
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~ 92 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 92 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCe
Confidence 45777889999999999999853 2568999999754332 46788899988887 689999999998876667
Q ss_pred eEEEEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD 654 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~ 654 (693)
.++|||||++|+|.++++...... ......++|.++..|+.|||+||+|||+. +||||||||+||||++
T Consensus 93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl~~ 169 (299)
T d1ywna1 93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSE 169 (299)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECG
T ss_pred EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeECC
Confidence 899999999999999997542100 01124589999999999999999999998 9999999999999999
Q ss_pred CCceEECCcccccccCCCC-cceeeeeehhhhhhh
Q 035786 655 KFEVRLGSLSELHAQGDSH-QNVLTRFLWRQLYQS 688 (693)
Q Consensus 655 ~~~~ki~Dfgla~~~~~~~-~~~~~~~~~~~~y~a 688 (693)
++.+||+|||+|+...... ....+...||+.|||
T Consensus 170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~A 204 (299)
T d1ywna1 170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 204 (299)
T ss_dssp GGCEEECC------CCSCTTSCCTTSCCCGGGGCC
T ss_pred CCcEEEccCcchhhccccccccccCceeeCccccc
Confidence 9999999999999874332 223445678899987
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.2e-31 Score=278.36 Aligned_cols=174 Identities=20% Similarity=0.314 Sum_probs=142.7
Q ss_pred CCCCccCccccCCeeeEEEEEeC------CCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLA------GGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~------~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
++|...+.||+|+||.||+|++. +++.||||+++..... .+.|.+|++++++++|||||+++|+|.. ++..
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-~~~~ 98 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-GQPT 98 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS-SSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEec-CCce
Confidence 34667788999999999999863 3578999999754322 3579999999999999999999999975 4678
Q ss_pred EEEEccCCCCChhhhhhccCC--CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 584 LLVYKYMVCGDLASSLHRVTD--LEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~--~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
++|||||++|+|.++++.... ........++|.++.+|+.|+|+||.|||.. +|+||||||+|||+|+++++||+
T Consensus 99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl~ 175 (308)
T d1p4oa_ 99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 175 (308)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEEe
Confidence 999999999999999975321 0111234589999999999999999999998 99999999999999999999999
Q ss_pred CcccccccCCCC-cceeeeeehhhhhhhh
Q 035786 662 SLSELHAQGDSH-QNVLTRFLWRQLYQSC 689 (693)
Q Consensus 662 Dfgla~~~~~~~-~~~~~~~~~~~~y~a~ 689 (693)
|||+|+...+.. ....+..++|+.|+|.
T Consensus 176 DFGla~~~~~~~~~~~~~~~~~t~~y~aP 204 (308)
T d1p4oa_ 176 DFGMTRDIYETDYYRKGGKGLLPVRWMSP 204 (308)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCH
T ss_pred ecccceeccCCcceeeccceecccccCCH
Confidence 999999874332 2234446788999875
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=6.2e-31 Score=273.56 Aligned_cols=161 Identities=18% Similarity=0.214 Sum_probs=140.3
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccc----ccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLH----SFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~----~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv 586 (693)
++|...+.||+|+||+||+|+. .+|+.||||++... ....+.|.+|++++++++|||||++++++.+ ++..|+|
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~iv 82 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-AQQIFMI 82 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-SSEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEee-CCeeeeE
Confidence 3477788999999999999996 56999999999643 2235679999999999999999999998875 4689999
Q ss_pred EccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccc
Q 035786 587 YKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSEL 666 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla 666 (693)
||||++|+|..++.... .+++.....++.||+.||+|||.. +||||||||+|||+++++.+||+|||+|
T Consensus 83 mE~~~gg~l~~~~~~~~--------~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a 151 (316)
T d1fota_ 83 MDYIEGGELFSLLRKSQ--------RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFA 151 (316)
T ss_dssp ECCCCSCBHHHHHHHTS--------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eeecCCccccccccccc--------cccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccc
Confidence 99999999999887543 478888899999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+...+... ..+||+.|||
T Consensus 152 ~~~~~~~~----~~~Gt~~Y~A 169 (316)
T d1fota_ 152 KYVPDVTY----TLCGTPDYIA 169 (316)
T ss_dssp EECSSCBC----CCCSCTTTCC
T ss_pred eEeccccc----cccCcccccC
Confidence 99754432 3678888887
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=9.5e-31 Score=269.78 Aligned_cols=163 Identities=15% Similarity=0.223 Sum_probs=138.9
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-------CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-------KKESYMMELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-------~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
+.|...+.||+|+||+||+|+. .+|+.||||+++.... ..+.|.+|+++|++++|||||++++++.+ ++..
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~ 88 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN-KTDV 88 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEE
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEE
Confidence 3477788999999999999997 5799999999864321 25689999999999999999999999875 5689
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC----ceE
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF----EVR 659 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~----~~k 659 (693)
++|||||++|+|.+++.... .+++.....++.|++.||+|||+. +||||||||+|||++.++ .+|
T Consensus 89 ~iv~E~~~gg~L~~~i~~~~--------~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vk 157 (293)
T d1jksa_ 89 ILILELVAGGELFDFLAEKE--------SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIK 157 (293)
T ss_dssp EEEEECCCSCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEE
T ss_pred EEEEEcCCCccccchhcccc--------ccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceE
Confidence 99999999999999997542 499999999999999999999998 999999999999999776 499
Q ss_pred ECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++|||+|+....... .....||+.|+|
T Consensus 158 l~DfG~a~~~~~~~~--~~~~~~t~~y~A 184 (293)
T d1jksa_ 158 IIDFGLAHKIDFGNE--FKNIFGTPEFVA 184 (293)
T ss_dssp ECCCTTCEECTTSCB--CSCCCCCGGGCC
T ss_pred ecchhhhhhcCCCcc--ccccCCCCcccC
Confidence 999999998744333 234567777775
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=99.97 E-value=1e-30 Score=275.70 Aligned_cols=164 Identities=15% Similarity=0.226 Sum_probs=141.1
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc-CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF-KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
+.|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|+++|++++|||||++++++.+ ++..|+||||
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~ivmE~ 107 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-KYEMVLILEF 107 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-SSEEEEEEEC
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEEc
Confidence 3577788999999999999996 5799999999975432 25678899999999999999999998875 5688999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC--CCCceEECCccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD--DKFEVRLGSLSELH 667 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld--~~~~~ki~Dfgla~ 667 (693)
|++|+|.+++.... ..+++.+...|+.||+.||+|||+. +||||||||+|||++ .++.+||+|||+|+
T Consensus 108 ~~gg~L~~~~~~~~-------~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~ 177 (352)
T d1koba_ 108 LSGGELFDRIAAED-------YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLAT 177 (352)
T ss_dssp CCCCBHHHHTTCTT-------CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred CCCChHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccce
Confidence 99999998876432 3589999999999999999999998 999999999999998 57899999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+..... .....||++|||
T Consensus 178 ~~~~~~~--~~~~~gt~~y~a 196 (352)
T d1koba_ 178 KLNPDEI--VKVTTATAEFAA 196 (352)
T ss_dssp ECCTTSC--EEEECSSGGGCC
T ss_pred ecCCCCc--eeeccCcccccC
Confidence 9855433 455778888886
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=1.2e-30 Score=266.27 Aligned_cols=163 Identities=23% Similarity=0.298 Sum_probs=138.2
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----------HHHHHHHHHHHhcCC-CCCccceeEEEEcC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----------KESYMMELDLFSRVS-HARLVPLLGQCLEH 579 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----------~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~ 579 (693)
++|...+.||+|+||+||+|+. .+|+.||||++...... .+.+.+|++++++++ |||||++++++.+
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 81 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET- 81 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc-
Confidence 4577788999999999999986 57999999999654321 246889999999997 9999999998875
Q ss_pred CCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceE
Q 035786 580 ETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR 659 (693)
Q Consensus 580 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~k 659 (693)
++..|+|||||++|+|.++|+.. ..+++.+...++.||+.||+|||.. +|+||||||+|||+++++.+|
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~~--------~~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~k 150 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTEK--------VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIK 150 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH--------SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEE
T ss_pred CcceEEEEEcCCCchHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeE
Confidence 56899999999999999999753 2499999999999999999999988 999999999999999999999
Q ss_pred ECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+|||+++....... .+..+||+.|+|
T Consensus 151 l~DFG~a~~~~~~~~--~~~~~gt~~y~~ 177 (277)
T d1phka_ 151 LTDFGFSCQLDPGEK--LREVCGTPSYLA 177 (277)
T ss_dssp ECCCTTCEECCTTCC--BCCCCSCGGGCC
T ss_pred EccchheeEccCCCc--eeeeeccCCCCC
Confidence 999999998754332 233455655554
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.2e-30 Score=268.84 Aligned_cols=164 Identities=12% Similarity=0.198 Sum_probs=141.4
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYM 590 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~ 590 (693)
++|...+.||+|+||+||+|.. .+|+.||||.++......+.+.+|+++|++++|||||++++++.+ ++..|+|||||
T Consensus 5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~lvmE~~ 83 (321)
T d1tkia_ 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES-MEELVMIFEFI 83 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-TTEEEEEECCC
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEecC
Confidence 4567778999999999999996 468999999998765556678999999999999999999998875 47899999999
Q ss_pred CCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC--CceEECCcccccc
Q 035786 591 VCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK--FEVRLGSLSELHA 668 (693)
Q Consensus 591 ~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~--~~~ki~Dfgla~~ 668 (693)
++|+|.++++... ..+++.+...|+.||+.||+|||+. +|+||||||+|||++.+ ..+||+|||+++.
T Consensus 84 ~gg~L~~~i~~~~-------~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~ 153 (321)
T d1tkia_ 84 SGLDIFERINTSA-------FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp CCCBHHHHHTSSS-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred CCCcHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhc
Confidence 9999999997532 3589999999999999999999998 99999999999999854 5899999999998
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
...... ....++|++|+|
T Consensus 154 ~~~~~~--~~~~~~t~~y~a 171 (321)
T d1tkia_ 154 LKPGDN--FRLLFTAPEYYA 171 (321)
T ss_dssp CCTTCE--EEEEESCGGGSC
T ss_pred cccCCc--cccccccccccc
Confidence 744333 445678888886
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1e-30 Score=271.65 Aligned_cols=170 Identities=20% Similarity=0.364 Sum_probs=135.0
Q ss_pred CCCccCccccCCeeeEEEEEeC-CCc--EEEEEEeccccc--CHHHHHHHHHHHhcC-CCCCccceeEEEEcCCCeeEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA-GGT--TVVVKKVSLHSF--KKESYMMELDLFSRV-SHARLVPLLGQCLEHETEKLLV 586 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~-~g~--~vavK~l~~~~~--~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~~lv 586 (693)
+|...++||+|+||+||+|++. +|. .||||++..... ..++|.+|+++|.++ +|||||+++|+|.+ ++..++|
T Consensus 11 ~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-~~~~~iV 89 (309)
T d1fvra_ 11 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYLA 89 (309)
T ss_dssp GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred HcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEec-CCeeEEE
Confidence 4677789999999999999975 344 588998864322 356799999999999 79999999999986 4689999
Q ss_pred EccCCCCChhhhhhccCCC--------CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 587 YKYMVCGDLASSLHRVTDL--------EDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 587 ~ey~~~GsL~~~l~~~~~~--------~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
|||+++|+|.++|+..... .......++|.++.+++.|||+||.|||+. +||||||||+|||++.++.+
T Consensus 90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 166 (309)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCCce
Confidence 9999999999999854210 011235699999999999999999999998 99999999999999999999
Q ss_pred EECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|||+++....... .....||+.|+|
T Consensus 167 kl~DfG~a~~~~~~~~--~~~~~gt~~y~a 194 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVK--KTMGRLPVRWMA 194 (309)
T ss_dssp EECCTTCEESSCEECC--C----CCTTTCC
T ss_pred EEcccccccccccccc--ccceecCCcccc
Confidence 9999999988643322 122346666654
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=9.1e-31 Score=266.75 Aligned_cols=164 Identities=20% Similarity=0.318 Sum_probs=125.8
Q ss_pred CCCccCccccCCeeeEEEEEeC--CC--cEEEEEEeccccc----CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeE
Q 035786 513 NFSETNLIKKGHSGDLFKGTLA--GG--TTVVVKKVSLHSF----KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKL 584 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~--~g--~~vavK~l~~~~~----~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~ 584 (693)
+|+..+.||+|+||.||+|++. ++ ..||||+++.... ..++|.+|+++|++++|||||+++|+|.+ +..+
T Consensus 9 d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~--~~~~ 86 (273)
T d1u46a_ 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT--PPMK 86 (273)
T ss_dssp GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCE
T ss_pred HeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee--cchh
Confidence 4666788999999999999863 23 3799999865322 14689999999999999999999999964 4678
Q ss_pred EEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcc
Q 035786 585 LVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLS 664 (693)
Q Consensus 585 lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfg 664 (693)
+||||+++|++.+++.... ..++|..+++++.|+|+||.|||+. +|+||||||+||+++.++++||+|||
T Consensus 87 lv~e~~~~~~l~~~~~~~~-------~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfG 156 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRKHQ-------GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFG 156 (273)
T ss_dssp EEEECCTTCBHHHHHHHHG-------GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred eeeeeecCcchhhhhhccc-------CCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccch
Confidence 9999999999999887533 3499999999999999999999998 89999999999999999999999999
Q ss_pred cccccCCCCcc--eeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQN--VLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~~--~~~~~~~~~~y~a 688 (693)
+++........ ..+...++.+|+|
T Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~a 182 (273)
T d1u46a_ 157 LMRALPQNDDHYVMQEHRKVPFAWCA 182 (273)
T ss_dssp TCEECCC-CCEEEC-----CCGGGCC
T ss_pred hhhhcccCCCcceecCccccCcccCC
Confidence 99987443222 2223445666665
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=4.1e-30 Score=271.06 Aligned_cols=160 Identities=16% Similarity=0.185 Sum_probs=140.0
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
+|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||++++++.+ ....++||
T Consensus 42 ~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~~v~ 120 (350)
T d1rdqe_ 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-NSNLYMVM 120 (350)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred CeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccc-cccccccc
Confidence 477788999999999999996 579999999986432 235679999999999999999999998875 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+++|+|.+++.... .+++.....|+.||+.||.|||+. +||||||||+|||++.++.+||+|||+|+
T Consensus 121 e~~~~g~l~~~l~~~~--------~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~ 189 (350)
T d1rdqe_ 121 EYVAGGEMFSHLRRIG--------RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189 (350)
T ss_dssp ECCTTCBHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ccccccchhhhHhhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeee
Confidence 9999999999997643 489999999999999999999998 99999999999999999999999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+.... ...+||++|||
T Consensus 190 ~~~~~~----~~~~Gt~~Y~A 206 (350)
T d1rdqe_ 190 RVKGRT----WTLCGTPEALA 206 (350)
T ss_dssp ECSSCB----CCCEECGGGCC
T ss_pred eccccc----ccccCccccCC
Confidence 875433 23678888887
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=3e-30 Score=273.59 Aligned_cols=162 Identities=19% Similarity=0.190 Sum_probs=136.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc----CHHHHHH---HHHHHhcCCCCCccceeEEEEcCCCee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF----KKESYMM---ELDLFSRVSHARLVPLLGQCLEHETEK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~----~~~~f~~---Ei~~l~~l~H~niv~l~g~~~~~~~~~ 583 (693)
++|...++||+|+||.||+|+. .+|+.||||++..... ....+.+ |+++++.++|||||++++++.+ ++..
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~-~~~~ 82 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKL 82 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-SSEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEE-CCEE
Confidence 4577889999999999999996 4699999999864321 2233444 4777888899999999998875 4689
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
|+|||||++|+|.++|.... .+++.....|+.||+.||+|||+. +||||||||+|||+++++.+||+||
T Consensus 83 ~ivmE~~~gg~L~~~l~~~~--------~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DF 151 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQHG--------VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDL 151 (364)
T ss_dssp EEEECCCCSCBHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCC
T ss_pred EEEEEecCCCcHHHHHHhcc--------cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeee
Confidence 99999999999999997643 478999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCcceeeeeehhhhhhh
Q 035786 664 SELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+|+....... ...+||+.|||
T Consensus 152 Gla~~~~~~~~---~~~~GT~~y~A 173 (364)
T d1omwa3 152 GLACDFSKKKP---HASVGTHGYMA 173 (364)
T ss_dssp TTCEECSSSCC---CSCCSCGGGCC
T ss_pred ceeeecCCCcc---cccccccccch
Confidence 99998754332 33578888876
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.8e-30 Score=268.55 Aligned_cols=174 Identities=24% Similarity=0.324 Sum_probs=143.2
Q ss_pred CCCCccCccccCCeeeEEEEEe------CCCcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCCCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL------AGGTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~------~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~~ 582 (693)
++|...+.||+|+||.||+|++ .+++.||||+++..... .++|.+|++++.++ +|||||+++|+|.+ ++.
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~-~~~ 101 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-GGP 101 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSS
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEee-CCE
Confidence 3466678999999999999985 24678999999764432 45799999999999 69999999999975 467
Q ss_pred eEEEEccCCCCChhhhhhccCCCC----------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeee
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLE----------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILL 652 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~----------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILl 652 (693)
.++|||||++|+|.+++++..... ......++|..+.+|+.|||+||+|||.+ +||||||||+||++
T Consensus 102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl~ 178 (311)
T d1t46a_ 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (311)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeecccccccccc
Confidence 899999999999999998643211 11234699999999999999999999998 99999999999999
Q ss_pred CCCCceEECCcccccccCCCCc-ceeeeeehhhhhhhh
Q 035786 653 DDKFEVRLGSLSELHAQGDSHQ-NVLTRFLWRQLYQSC 689 (693)
Q Consensus 653 d~~~~~ki~Dfgla~~~~~~~~-~~~~~~~~~~~y~a~ 689 (693)
+.++.+|++|||+++....... ...+..+||+.|+|.
T Consensus 179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aP 216 (311)
T d1t46a_ 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216 (311)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCH
T ss_pred cccCcccccccchheeccCCCcceEeeecccChHHcCH
Confidence 9999999999999998754332 234557889999873
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3e-30 Score=266.90 Aligned_cols=159 Identities=19% Similarity=0.316 Sum_probs=131.2
Q ss_pred cCccccCCeeeEEEEEe-CCCcEEEEEEecccccC------HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEcc
Q 035786 517 TNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK------KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~------~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey 589 (693)
.++||+|+||+||+|+. .+|+.||||+++..... .+.+.+|++++++++|||||++++++.+ ++..++||||
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~-~~~~~ivmE~ 81 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-KSNISLVFDF 81 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC-TTCCEEEEEC
T ss_pred ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCceeehhhh
Confidence 46899999999999996 46999999998653322 2468999999999999999999999875 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccccc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQ 669 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~~ 669 (693)
+++|++..+.... ..+++.+...++.||+.||+|||.. +|+||||||+|||+++++.+||+|||+|+..
T Consensus 82 ~~~~~~~~~~~~~--------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~ 150 (299)
T d1ua2a_ 82 METDLEVIIKDNS--------LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 150 (299)
T ss_dssp CSEEHHHHHTTCC--------SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred hcchHHhhhhhcc--------cCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCcccccc
Confidence 9998887665432 3488888999999999999999998 9999999999999999999999999999887
Q ss_pred CCCCcceeeeeehhhhhhh
Q 035786 670 GDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~a 688 (693)
.+.... ....+||++|||
T Consensus 151 ~~~~~~-~~~~~gt~~y~a 168 (299)
T d1ua2a_ 151 GSPNRA-YTHQVVTRWYRA 168 (299)
T ss_dssp TSCCCC-CCCSCCCCTTCC
T ss_pred CCCccc-ccceecChhhcc
Confidence 544332 233567888876
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=9.2e-30 Score=265.12 Aligned_cols=164 Identities=20% Similarity=0.268 Sum_probs=138.9
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccc----cCHHHHHHHHHHHh-cCCCCCccceeEEEEcCCCeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHS----FKKESYMMELDLFS-RVSHARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~----~~~~~f~~Ei~~l~-~l~H~niv~l~g~~~~~~~~~~l 585 (693)
++|...+.||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+.++. .++|||||++++++.+ ++..|+
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~-~~~~yi 80 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT-KENLFF 80 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEcc-CCceeE
Confidence 3577788999999999999996 469999999996432 23456778888765 6899999999998875 468999
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
|||||++|+|.++++... .++..+...++.||+.||+|||+. +||||||||+|||+++++.+||+|||+
T Consensus 81 vmEy~~~g~L~~~i~~~~--------~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~ 149 (320)
T d1xjda_ 81 VMEYLNGGDLMYHIQSCH--------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGM 149 (320)
T ss_dssp EEECCTTCBHHHHHHHHS--------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEeecCCCcHHHHhhccC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccch
Confidence 999999999999998643 378889999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeehhhhhhh
Q 035786 666 LHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~~y~a 688 (693)
++....... ..+..+||++|+|
T Consensus 150 a~~~~~~~~-~~~~~~gt~~y~a 171 (320)
T d1xjda_ 150 CKENMLGDA-KTNTFCGTPDYIA 171 (320)
T ss_dssp CBCCCCTTC-CBCCCCSCGGGCC
T ss_pred hhhcccccc-cccccCCCCCcCC
Confidence 997643332 2445678999986
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.96 E-value=6.9e-30 Score=261.18 Aligned_cols=166 Identities=15% Similarity=0.194 Sum_probs=133.2
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC----HHHHHHHHHHHhcCCCCCccceeEEEEcCCC---ee
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK----KESYMMELDLFSRVSHARLVPLLGQCLEHET---EK 583 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~----~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~---~~ 583 (693)
++|...+.||+|+||.||+|+. .+|+.||||+++..... .+.|.+|++++++++|||||++++++...+. ..
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 4477788999999999999985 57999999999754332 3579999999999999999999998865322 37
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCc
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSL 663 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Df 663 (693)
|+||||+++|+|.+++.... .++|.+...|+.||+.||+|||+. +||||||||+|||++.++..+++||
T Consensus 87 ~lvmE~~~g~~L~~~~~~~~--------~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~ 155 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVHTEG--------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDF 155 (277)
T ss_dssp EEEEECCCEEEHHHHHHHHC--------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCC
T ss_pred EEEEECCCCCEehhhhcccC--------CCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehh
Confidence 89999999999999987543 499999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCC--Ccceeeeeehhhhhhh
Q 035786 664 SELHAQGDS--HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 664 gla~~~~~~--~~~~~~~~~~~~~y~a 688 (693)
|+++..... ........+||+.|||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~a 182 (277)
T d1o6ya_ 156 GIARAIADSGNSVTQTAAVIGTAQYLS 182 (277)
T ss_dssp TTCEECC----------------TTCC
T ss_pred hhhhhhccccccccccccccCcccccC
Confidence 999876322 2223455789999987
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=9.3e-30 Score=263.02 Aligned_cols=165 Identities=20% Similarity=0.331 Sum_probs=134.8
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||+||+|+. .+|+.||||++..... ..+.|.+|++++++++|||||++++++.+ ++..++||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~-~~~~~iv~ 80 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-ENKLYLVF 80 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEecccccc-ccceeEEE
Confidence 3577889999999999999996 5799999999965432 24679999999999999999999999876 46899999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+.++ +.+++..... ..+++.....++.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+
T Consensus 81 e~~~~~-~~~~~~~~~~------~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~ 150 (298)
T d1gz8a_ 81 EFLHQD-LKKFMDASAL------TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150 (298)
T ss_dssp ECCSEE-HHHHHHHTTT------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHH
T ss_pred eecCCc-hhhhhhhhcc------cCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcce
Confidence 999764 4445543221 4599999999999999999999998 89999999999999999999999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
........ .....||+.|+|
T Consensus 151 ~~~~~~~~-~~~~~gt~~y~a 170 (298)
T d1gz8a_ 151 AFGVPVRT-YTHEVVTLWYRA 170 (298)
T ss_dssp HHCCCSBC-TTCCBCCCTTCC
T ss_pred eccCCccc-ceeecccceeee
Confidence 87443332 333567777765
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.4e-29 Score=261.74 Aligned_cols=172 Identities=17% Similarity=0.267 Sum_probs=135.4
Q ss_pred CCCccCccccCCeeeEEEEEeCC--------CcEEEEEEecccccC--HHHHHHHHHHHhcC-CCCCccceeEEEEcCCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTLAG--------GTTVVVKKVSLHSFK--KESYMMELDLFSRV-SHARLVPLLGQCLEHET 581 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~~~--------g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l-~H~niv~l~g~~~~~~~ 581 (693)
+|...+.||+|+||.||+|+..+ +..||||+++..... ..+|.+|+..+.++ +|||||+++|+|.+ +.
T Consensus 14 ~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~-~~ 92 (299)
T d1fgka_ 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DG 92 (299)
T ss_dssp GEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred HeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc-CC
Confidence 46667899999999999998532 357999999764432 46899999999998 89999999999976 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCC--------CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLE--------DDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD 653 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~--------~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld 653 (693)
..++|||||++|+|.++|+...... ......++|.++++++.|+|.||+|||.. +||||||||+|||++
T Consensus 93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiLl~ 169 (299)
T d1fgka_ 93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 169 (299)
T ss_dssp SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecccceeec
Confidence 7899999999999999997543210 11235699999999999999999999998 999999999999999
Q ss_pred CCCceEECCcccccccCCCC-cceeeeeehhhhhhh
Q 035786 654 DKFEVRLGSLSELHAQGDSH-QNVLTRFLWRQLYQS 688 (693)
Q Consensus 654 ~~~~~ki~Dfgla~~~~~~~-~~~~~~~~~~~~y~a 688 (693)
.++.+||+|||+++...+.. ........+++.|+|
T Consensus 170 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a 205 (299)
T d1fgka_ 170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 205 (299)
T ss_dssp TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSC
T ss_pred CCCCeEeccchhhccccccccccccccCCCChhhhh
Confidence 99999999999999874332 223444678888877
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.95 E-value=2.1e-29 Score=258.89 Aligned_cols=164 Identities=18% Similarity=0.273 Sum_probs=134.8
Q ss_pred CCCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~e 588 (693)
++|...+.||+|+||+||+|+..+|+.||||++..... ..+.|.+|+++|++++|||||++++++.+ ++..++|+|
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~i~~e 80 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-KKRLVLVFE 80 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-SSCEEEEEE
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeeccc-CCceeEEEE
Confidence 35777889999999999999998999999999965432 24679999999999999999999998875 468899999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
|+.++.+..+.+.. ..++..+...|+.||+.||+|||+. +||||||||+|||+++++.+|++|||.+..
T Consensus 81 ~~~~~~~~~~~~~~--------~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~ 149 (286)
T d1ob3a_ 81 HLDQDLKKLLDVCE--------GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARA 149 (286)
T ss_dssp CCSEEHHHHHHTST--------TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHH
T ss_pred eehhhhHHHHHhhc--------CCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEeccccccee
Confidence 99988777665432 3599999999999999999999998 999999999999999999999999999998
Q ss_pred cCCCCcceeeeeehhhhhhh
Q 035786 669 QGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~~~~~~~~~~~~y~a 688 (693)
....... ....++++.|+|
T Consensus 150 ~~~~~~~-~~~~~~~~~y~~ 168 (286)
T d1ob3a_ 150 FGIPVRK-YTHEIVTLWYRA 168 (286)
T ss_dssp HCC----------CCCTTCC
T ss_pred cccCccc-cceecccchhhh
Confidence 7443222 233456666665
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.7e-29 Score=263.21 Aligned_cols=162 Identities=18% Similarity=0.238 Sum_probs=133.7
Q ss_pred CCCCcc-CccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcC-CCCCccceeEEEEc---CCCeeEE
Q 035786 512 GNFSET-NLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRV-SHARLVPLLGQCLE---HETEKLL 585 (693)
Q Consensus 512 ~~~~~~-~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~g~~~~---~~~~~~l 585 (693)
++|... ++||+|+||+||+|+. .+|+.||||+++. .+.+.+|++++.++ +|||||++++++.+ .+...|+
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~i 86 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 86 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEE
Confidence 356554 4699999999999986 5799999999863 34578899987655 89999999998743 2345799
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC---CCceEECC
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD---KFEVRLGS 662 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~---~~~~ki~D 662 (693)
|||||++|+|.++|..... ..+++.+...|+.|++.||+|||+. +|+||||||+|||+++ ++.+||+|
T Consensus 87 vmEy~~gg~L~~~i~~~~~------~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~D 157 (335)
T d2ozaa1 87 VMECLDGGELFSRIQDRGD------QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 157 (335)
T ss_dssp EEECCCSEEHHHHHHSCSC------CCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECC
T ss_pred EEECCCCCcHHHHHHhcCC------CCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccc
Confidence 9999999999999975321 4599999999999999999999998 9999999999999986 45799999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|+....... ....+||++|||
T Consensus 158 FG~a~~~~~~~~--~~~~~gt~~y~a 181 (335)
T d2ozaa1 158 FGFAKETTSHNS--LTTPCYTPYYVA 181 (335)
T ss_dssp CTTCEECCCCCC--CCCCSCCCSSCC
T ss_pred cceeeeccCCCc--cccccCCcccCC
Confidence 999998754333 344678888887
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=4.7e-29 Score=254.20 Aligned_cols=162 Identities=20% Similarity=0.227 Sum_probs=135.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC-------HHHHHHHHHHHhcCC--CCCccceeEEEEcCCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK-------KESYMMELDLFSRVS--HARLVPLLGQCLEHET 581 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~-------~~~f~~Ei~~l~~l~--H~niv~l~g~~~~~~~ 581 (693)
++|...++||+|+||+||+|+. .+|+.||||++...... .+++.+|++++++++ |||||++++++.+ ++
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~-~~ 82 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER-PD 82 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC-SS
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee-CC
Confidence 3577788999999999999996 57999999998653211 234778999999997 8999999998875 46
Q ss_pred eeEEEEccCCC-CChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceE
Q 035786 582 EKLLVYKYMVC-GDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVR 659 (693)
Q Consensus 582 ~~~lv~ey~~~-GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~k 659 (693)
..++||||+.+ +++.+++... ..+++.+...++.|++.||+|||+. +||||||||+|||++.+ +.+|
T Consensus 83 ~~~lv~e~~~~~~~l~~~~~~~--------~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vk 151 (273)
T d1xwsa_ 83 SFVLILERPEPVQDLFDFITER--------GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELK 151 (273)
T ss_dssp EEEEEEECCSSEEEHHHHHHHH--------CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEE
T ss_pred eEEEEEEeccCcchHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEE
Confidence 88999999976 6888888653 2489999999999999999999998 99999999999999954 7999
Q ss_pred ECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 660 LGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 660 i~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|+|||+|+...... .+..+||+.|||
T Consensus 152 l~DFG~a~~~~~~~---~~~~~GT~~y~a 177 (273)
T d1xwsa_ 152 LIDFGSGALLKDTV---YTDFDGTRVYSP 177 (273)
T ss_dssp ECCCTTCEECCSSC---BCCCCSCGGGSC
T ss_pred ECccccceeccccc---ccccccCCCcCC
Confidence 99999999864332 344678888876
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.5e-28 Score=257.58 Aligned_cols=165 Identities=18% Similarity=0.301 Sum_probs=133.2
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC--HHHHHHHHHHHhcCCCCCccceeEEEEcCC---CeeEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK--KESYMMELDLFSRVSHARLVPLLGQCLEHE---TEKLL 585 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~--~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~---~~~~l 585 (693)
..|...+.||+|+||+||+|+. .+|+.||||++...... .+.+.+|+++|++++|||||+++++|.... ...+.
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~ 87 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 87 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence 3477788999999999999985 57999999999754322 457999999999999999999999986432 12355
Q ss_pred EEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccc
Q 035786 586 VYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSE 665 (693)
Q Consensus 586 v~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgl 665 (693)
++||+.+|+|.+++.. ..+++.....++.|++.||+|||.. +||||||||+|||+++++.+||+|||+
T Consensus 88 l~~~~~~g~L~~~l~~---------~~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~ 155 (345)
T d1pmea_ 88 LVTHLMGADLYKLLKT---------QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 155 (345)
T ss_dssp EEEECCCEEHHHHHHH---------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEeecCCchhhhhhc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCc
Confidence 6677789999999964 2489999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCC--Ccceeeeeehhhhhhh
Q 035786 666 LHAQGDS--HQNVLTRFLWRQLYQS 688 (693)
Q Consensus 666 a~~~~~~--~~~~~~~~~~~~~y~a 688 (693)
++..... ........+||+.|+|
T Consensus 156 a~~~~~~~~~~~~~~~~~gt~~y~a 180 (345)
T d1pmea_ 156 ARVADPDHDHTGFLTEYVATRWYRA 180 (345)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCC
T ss_pred eeeccCCCccceeeccccccceech
Confidence 9986332 2222344678888876
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.8e-28 Score=259.08 Aligned_cols=162 Identities=20% Similarity=0.278 Sum_probs=129.2
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----CeeEEEE
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHE-----TEKLLVY 587 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~~lv~ 587 (693)
|...++||+|+||+||+|+. .+|+.||||++..... .+.+|+++|++++|||||+++++|.... ...++||
T Consensus 22 Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 98 (350)
T d1q5ka_ 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98 (350)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEE
T ss_pred cEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEE
Confidence 66778999999999999997 4699999999975432 2347999999999999999999986431 2368999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCC-CceEECCcccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDK-FEVRLGSLSEL 666 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~-~~~ki~Dfgla 666 (693)
|||++|.+..+.+... ....+++.+...|+.||+.||+|||+. +||||||||+|||++.+ ..+||+|||++
T Consensus 99 Ey~~~~~~~~l~~~~~-----~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a 170 (350)
T d1q5ka_ 99 DYVPETVYRVARHYSR-----AKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 170 (350)
T ss_dssp ECCSEEHHHHHHHHHH-----TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTC
T ss_pred eccCCccHHHHHhhhh-----ccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccch
Confidence 9999765544433211 114599999999999999999999988 99999999999999977 48999999999
Q ss_pred cccCCCCcceeeeeehhhhhhh
Q 035786 667 HAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~y~a 688 (693)
+....... ....+||+.|+|
T Consensus 171 ~~~~~~~~--~~~~~gt~~y~a 190 (350)
T d1q5ka_ 171 KQLVRGEP--NVSYICSRYYRA 190 (350)
T ss_dssp EECCTTSC--CCSCCSCTTSCC
T ss_pred hhccCCcc--cccccccccccC
Confidence 98743332 233567777776
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=7.4e-28 Score=254.14 Aligned_cols=160 Identities=19% Similarity=0.314 Sum_probs=129.0
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCC-----Ce
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHE-----TE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~ 582 (693)
+.|...+.||+|+||+||+|+. .+|+.||||++...... .+.+.+|+++|++++|||||+++++|...+ ..
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~ 97 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 97 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence 4577788999999999999996 56999999999754333 457899999999999999999999986532 24
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++||||+ +++|..+.+. ..+++.....++.|++.||+|||+. +||||||||+|||++.++.+|++|
T Consensus 98 ~~lv~e~~-~~~l~~~~~~---------~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~D 164 (346)
T d1cm8a_ 98 FYLVMPFM-GTDLGKLMKH---------EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILD 164 (346)
T ss_dssp CEEEEECC-SEEHHHHHHH---------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECC
T ss_pred EEEEEecc-cccHHHHHHh---------ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhccccccccccc
Confidence 68999999 5677777653 2499999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|+...... +..+||++|+|
T Consensus 165 fg~a~~~~~~~----~~~~~t~~y~a 186 (346)
T d1cm8a_ 165 FGLARQADSEM----TGYVVTRWYRA 186 (346)
T ss_dssp CTTCEECCSSC----CSSCSCGGGCC
T ss_pred ccceeccCCcc----ccccccccccC
Confidence 99999875433 33567777766
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.5e-27 Score=245.50 Aligned_cols=164 Identities=19% Similarity=0.239 Sum_probs=137.6
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEE
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVY 587 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ 587 (693)
++|...+.||+|+||+||+|+. .+|+.||||+++..... .+.+.+|++++++++|||||+++++|.+ ....++|+
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~-~~~~~iv~ 80 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeecccccc-ccceeEEe
Confidence 3577788999999999999996 57899999999654332 4679999999999999999999999876 46789999
Q ss_pred ccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECCccccc
Q 035786 588 KYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELH 667 (693)
Q Consensus 588 ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~ 667 (693)
||+.+++|..+++.. ..+++.....++.|++.||+|||.. +||||||||+|||++.++.+|++|||.++
T Consensus 81 ~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~ 149 (292)
T d1unla_ 81 EFCDQDLKKYFDSCN--------GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLAR 149 (292)
T ss_dssp ECCSEEHHHHHHHTT--------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred eeccccccccccccc--------cccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhh
Confidence 999999998887643 3488999999999999999999998 99999999999999999999999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
........ .....++++|+|
T Consensus 150 ~~~~~~~~-~~~~~~~~~~~~ 169 (292)
T d1unla_ 150 AFGIPVRC-YSAEVVTLWYRP 169 (292)
T ss_dssp ECCSCCSC-CCSCCSCGGGCC
T ss_pred cccCCCcc-ceeeccccchhh
Confidence 87443322 222345555654
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.94 E-value=1.7e-27 Score=249.40 Aligned_cols=159 Identities=15% Similarity=0.239 Sum_probs=133.2
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCC-CCCccceeEEEEcC-CCeeEEEEc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-HARLVPLLGQCLEH-ETEKLLVYK 588 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~-~~~~~lv~e 588 (693)
++|...+.||+|+||+||+|+. .+|+.||||+++.. ..+++.+|+++|.+++ |||||++++++... ....++|||
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e 112 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 112 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH--HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEe
Confidence 3577788999999999999996 57999999998643 3567899999999995 99999999988643 345889999
Q ss_pred cCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC-ceEECCccccc
Q 035786 589 YMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF-EVRLGSLSELH 667 (693)
Q Consensus 589 y~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~-~~ki~Dfgla~ 667 (693)
|+++|+|..+.+ .++......|+.||+.||+|||+. +||||||||+|||++.+. .+||+|||+++
T Consensus 113 ~~~~~~L~~~~~-----------~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~ 178 (328)
T d3bqca1 113 HVNNTDFKQLYQ-----------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 178 (328)
T ss_dssp CCCSCBGGGTTT-----------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCE
T ss_pred ecCCCcHHHHhc-----------CCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccce
Confidence 999999987642 388999999999999999999998 999999999999999654 69999999999
Q ss_pred ccCCCCcceeeeeehhhhhhh
Q 035786 668 AQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~y~a 688 (693)
....... ....++|+.|+|
T Consensus 179 ~~~~~~~--~~~~~~t~~y~a 197 (328)
T d3bqca1 179 FYHPGQE--YNVRVASRYFKG 197 (328)
T ss_dssp ECCTTCC--CCSCCSCGGGCC
T ss_pred eccCCCc--ccccccCccccC
Confidence 8754332 234567777765
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=5.4e-28 Score=250.61 Aligned_cols=166 Identities=21% Similarity=0.284 Sum_probs=132.6
Q ss_pred hCCCCccCccccCCeeeEEEEEe-C-CCcEEEEEEeccccc---CHHHHHHHHHHHhcC---CCCCccceeEEEEc----
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-A-GGTTVVVKKVSLHSF---KKESYMMELDLFSRV---SHARLVPLLGQCLE---- 578 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~-~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l---~H~niv~l~g~~~~---- 578 (693)
.++|...+.||+|+||+||+|+. . +++.||||++..... ...++.+|+++++.+ +|||||+++++|..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~ 85 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 85 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence 45688889999999999999985 3 467899999864322 234577788877665 89999999998853
Q ss_pred CCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCce
Q 035786 579 HETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEV 658 (693)
Q Consensus 579 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ 658 (693)
.+...+++|||+++|++........ ..+++.....++.|++.||+|||+. +||||||||+|||+++++.+
T Consensus 86 ~~~~~~~~~e~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~ 155 (305)
T d1blxa_ 86 RETKLTLVFEHVDQDLTTYLDKVPE-------PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQI 155 (305)
T ss_dssp SEEEEEEEEECCSCBHHHHHHHSCT-------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred cCceEEEEEEeccCCchhhhhhccC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCe
Confidence 2235789999999987765544322 3589999999999999999999998 99999999999999999999
Q ss_pred EECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 659 RLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 659 ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+|||+++....... ....+||+.|||
T Consensus 156 kl~dfg~~~~~~~~~~--~~~~~gT~~Y~A 183 (305)
T d1blxa_ 156 KLADFGLARIYSFQMA--LTSVVVTLWYRA 183 (305)
T ss_dssp EECSCCSCCCCCGGGG--GCCCCCCCTTCC
T ss_pred eecchhhhhhhccccc--CCCcccChhhcC
Confidence 9999999987643322 344677888876
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.4e-27 Score=248.98 Aligned_cols=166 Identities=19% Similarity=0.292 Sum_probs=132.9
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEeccccc---CHHHHHHHHHHHhcCCCCCccceeEEEEcC-------C
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSF---KKESYMMELDLFSRVSHARLVPLLGQCLEH-------E 580 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-------~ 580 (693)
++|+..+.||+|+||+||+|+. .+|+.||||++..... ..+++.+|+++|++++||||++++++|... +
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~ 89 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 89 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence 4577888999999999999996 5799999999854322 246789999999999999999999988542 2
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEE
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRL 660 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki 660 (693)
...++||||+++|.+..+.... ..++......|+.|++.||.|||+. +|+||||||+|||+++++.+||
T Consensus 90 ~~~~iv~e~~~~~~~~~~~~~~--------~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl 158 (318)
T d3blha1 90 GSIYLVFDFCEHDLAGLLSNVL--------VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKL 158 (318)
T ss_dssp -CEEEEEECCCEEHHHHHTCTT--------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEE
T ss_pred ceEEEEEeccCCCccchhhhcc--------cccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEe
Confidence 3478999999988776554332 3478888899999999999999998 9999999999999999999999
Q ss_pred CCcccccccCCCC---cceeeeeehhhhhhh
Q 035786 661 GSLSELHAQGDSH---QNVLTRFLWRQLYQS 688 (693)
Q Consensus 661 ~Dfgla~~~~~~~---~~~~~~~~~~~~y~a 688 (693)
+|||+++...... .......+||++|+|
T Consensus 159 ~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~a 189 (318)
T d3blha1 159 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRP 189 (318)
T ss_dssp CCCTTCEECCC-----CCCCCSCCSCGGGCC
T ss_pred eecceeeecccccccccccccceecCHHHhh
Confidence 9999998774322 112333578899976
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.2e-27 Score=249.20 Aligned_cols=165 Identities=19% Similarity=0.176 Sum_probs=136.2
Q ss_pred CCCCccCccccCCeeeEEEEEe----CCCcEEEEEEecccc-----cCHHHHHHHHHHHhcCCC-CCccceeEEEEcCCC
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL----AGGTTVVVKKVSLHS-----FKKESYMMELDLFSRVSH-ARLVPLLGQCLEHET 581 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~f~~Ei~~l~~l~H-~niv~l~g~~~~~~~ 581 (693)
++|+..+.||+|+||+||+|+. .+|+.||||.++... ...+.+.+|++++.+++| ||||++++++.+ ..
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~-~~ 102 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-ET 102 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-TT
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeecc-CC
Confidence 3478889999999999999984 248899999986432 224678899999999976 799999988765 46
Q ss_pred eeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEEC
Q 035786 582 EKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG 661 (693)
Q Consensus 582 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~ 661 (693)
..++|||||.+|+|.++++... .+.......++.|++.|++|+|+. +||||||||+|||+|.++.+||+
T Consensus 103 ~~~~v~e~~~~~~L~~~i~~~~--------~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~ 171 (322)
T d1vzoa_ 103 KLHLILDYINGGELFTHLSQRE--------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLT 171 (322)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEES
T ss_pred ceeeeeecccccHHHHHHHhcc--------cccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEe
Confidence 8999999999999999998653 366777888999999999999998 89999999999999999999999
Q ss_pred CcccccccCCCCcceeeeeehhhhhhh
Q 035786 662 SLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 662 Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
|||+++.+............|++.|+|
T Consensus 172 DFG~a~~~~~~~~~~~~~~~g~~~~~~ 198 (322)
T d1vzoa_ 172 DFGLSKEFVADETERAYDFCGTIEYMA 198 (322)
T ss_dssp CSSEEEECCGGGGGGGCGGGSCCTTCC
T ss_pred eccchhhhcccccccccccccccccch
Confidence 999999875444433444566666654
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.93 E-value=6.7e-27 Score=241.55 Aligned_cols=164 Identities=18% Similarity=0.270 Sum_probs=133.4
Q ss_pred CCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCccceeEEEEcCCCeeEEEEccCC
Q 035786 513 NFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMV 591 (693)
Q Consensus 513 ~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv~l~g~~~~~~~~~~lv~ey~~ 591 (693)
.|...+.||+|+||+||+|+. .+|+.||||.+.... ..+++.+|++++++++|+|+|..+++|...++..++||||+.
T Consensus 8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~ 86 (299)
T d1ckia_ 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG 86 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC
Confidence 477788999999999999986 568999999886543 234688999999999999888887777666678899999995
Q ss_pred CCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeC---CCCceEECCcccccc
Q 035786 592 CGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLD---DKFEVRLGSLSELHA 668 (693)
Q Consensus 592 ~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld---~~~~~ki~Dfgla~~ 668 (693)
|++.+.+.... ..+++.....++.|++.||+|||+. +||||||||+|||++ .+..+|++|||+|+.
T Consensus 87 -~~l~~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~ 155 (299)
T d1ckia_ 87 -PSLEDLFNFCS-------RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 155 (299)
T ss_dssp -CBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEE
T ss_pred -Cchhhhhhhcc-------CCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCccee
Confidence 56766665432 3589999999999999999999998 999999999999875 456899999999998
Q ss_pred cCCCCc------ceeeeeehhhhhhh
Q 035786 669 QGDSHQ------NVLTRFLWRQLYQS 688 (693)
Q Consensus 669 ~~~~~~------~~~~~~~~~~~y~a 688 (693)
+.+... ...+..+||+.|||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~y~a 181 (299)
T d1ckia_ 156 YRDARTHQHIPYRENKNLTGTARYAS 181 (299)
T ss_dssp CBCTTTCCBCCCCBCCSCCCCSSSCC
T ss_pred ccccccccceeccccCCcCCCccccC
Confidence 743221 12344679999987
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.93 E-value=1.8e-26 Score=237.38 Aligned_cols=164 Identities=16% Similarity=0.138 Sum_probs=134.7
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCCC-CCccceeEEEEcCCCeeEEEEcc
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVSH-ARLVPLLGQCLEHETEKLLVYKY 589 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~~lv~ey 589 (693)
++|...+.||+|+||+||+|+. .+|+.||||.+.... ..+++.+|++.+..++| +|++.+++++.+ +...++||||
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-~~~~~~vme~ 82 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-GLHNVLVIDL 82 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-TTEEEEEEEC
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCCCCCCEEEEEeec-CCccEEEEEe
Confidence 3577788999999999999996 468999999886533 23457889999999976 899999988765 4678999999
Q ss_pred CCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCC-----CCceEECCcc
Q 035786 590 MVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDD-----KFEVRLGSLS 664 (693)
Q Consensus 590 ~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~-----~~~~ki~Dfg 664 (693)
+ +|+|.++++... ..+++.++..++.+++.||+|||+. +||||||||+|||++. ++.+||+|||
T Consensus 83 ~-~~~l~~~~~~~~-------~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG 151 (293)
T d1csna_ 83 L-GPSLEDLLDLCG-------RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 151 (293)
T ss_dssp C-CCBHHHHHHHTT-------TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred c-CCCHHHHHHhhc-------cchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccc
Confidence 9 689999987533 3589999999999999999999998 9999999999999975 5679999999
Q ss_pred cccccCCCCc------ceeeeeehhhhhhh
Q 035786 665 ELHAQGDSHQ------NVLTRFLWRQLYQS 688 (693)
Q Consensus 665 la~~~~~~~~------~~~~~~~~~~~y~a 688 (693)
+|+.+.+... .....++||+.|||
T Consensus 152 ~a~~~~~~~~~~~~~~~~~~~~~GT~~y~a 181 (293)
T d1csna_ 152 MVKFYRDPVTKQHIPYREKKNLSGTARYMS 181 (293)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCC
T ss_pred eeEEcccCccccceeecccCceEEchhhcC
Confidence 9998743211 12334679999987
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=3.1e-26 Score=234.73 Aligned_cols=208 Identities=28% Similarity=0.321 Sum_probs=160.9
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEcc-CCCCCCcCchhhhcCcCCCeee
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLS-RNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls-~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+.+++|+|++|+|+...+..|.++++|++|++++|++.+..+..+..++.++.++.. .|.++...|..+.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 467888888888887666778888888888888888888777788888888888765 4556655577788888888888
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|.+....+..+..+++|+.+++++|++++..+..|..+++|+.|++++|++++..+..|.++++|+++++++|++++
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~ 191 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccc
Confidence 88888876666677778888888888888887667777788888888888888887777777777777777777777775
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCccc
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGS 326 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~ 326 (693)
..|. .|..+++|++|++++|++++..|..+..+++|++|+|++|.+.+.
T Consensus 192 i~~~-~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~ 240 (284)
T d1ozna_ 192 VHPH-AFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (284)
T ss_dssp ECTT-TTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred cChh-HhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCC
Confidence 4443 457777777777777777777777777777777777777777654
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.1e-26 Score=245.31 Aligned_cols=162 Identities=19% Similarity=0.282 Sum_probs=132.5
Q ss_pred hCCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC----CCe
Q 035786 511 TGNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH----ETE 582 (693)
Q Consensus 511 t~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~----~~~ 582 (693)
.++|...+.||+|+||+||+|+. .+|+.||||++...... .+.+.+|++++++++|||||++++++... +..
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~ 96 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 96 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence 34577888999999999999985 57999999999754433 35788999999999999999999987532 123
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.++|+||+.+|+|.++++. ..+++.+...|+.||+.||+|||+. +|+||||||+|||++.++.+|++|
T Consensus 97 ~~~i~~~~~gg~L~~~~~~---------~~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~d 164 (348)
T d2gfsa1 97 DVYLVTHLMGADLNNIVKC---------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILD 164 (348)
T ss_dssp CCEEEEECCSEEHHHHHTT---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred eEEEEEeecCCchhhhccc---------ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccc
Confidence 5677888899999999864 2489999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||++........ ...||+.|+|
T Consensus 165 fg~a~~~~~~~~----~~~g~~~y~a 186 (348)
T d2gfsa1 165 FGLARHTDDEMT----GYVATRWYRA 186 (348)
T ss_dssp C----CCTGGGS----SSCHHHHTSC
T ss_pred cchhcccCcccc----cccccccccC
Confidence 999987643332 3567888876
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.7e-25 Score=229.08 Aligned_cols=265 Identities=20% Similarity=0.188 Sum_probs=220.0
Q ss_pred EEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecc-cc
Q 035786 122 VLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLA-SN 200 (693)
Q Consensus 122 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls-~N 200 (693)
.++.++++++ .+|..+. +++++|+|++|+|++..+.+|.++++|++|++++|.+....+..+..+..+..+... .|
T Consensus 15 ~v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~ 91 (284)
T d1ozna_ 15 TTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (284)
T ss_dssp EEECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred EEEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccc
Confidence 3466666776 5676554 578999999999997777789999999999999999998888888889999998765 55
Q ss_pred cCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCC
Q 035786 201 FFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSE 280 (693)
Q Consensus 201 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~ 280 (693)
.++...|..+.++++|++|++++|.+....+..+...++|+.+++++|++++..+..|..+++|++|++++|++++ +++
T Consensus 92 ~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~-l~~ 170 (284)
T d1ozna_ 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VPE 170 (284)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-ECT
T ss_pred ccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccc-cch
Confidence 6666668889999999999999999988888889999999999999999998888899999999999999999985 555
Q ss_pred cccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCC-CC
Q 035786 281 GLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSF-RK 359 (693)
Q Consensus 281 ~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~-~~ 359 (693)
..|..+++|+.+++++|++++..|..|..+++|++||+++|++++..| ..+..+.+|+.|++++|.+.++++...+ ..
T Consensus 171 ~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~-~~~~~~~~L~~L~l~~N~l~C~C~~~~l~~~ 249 (284)
T d1ozna_ 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPT-EALAPLRALQYLRLNDNPWVCDCRARPLWAW 249 (284)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCH-HHHTTCTTCCEEECCSSCEECSGGGHHHHHH
T ss_pred hhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccc-cccccccccCEEEecCCCCCCCccchHHHHH
Confidence 678999999999999999999999999999999999999999997555 4567889999999999999998765222 12
Q ss_pred CCEEEccCCcceeecCCCcCc--ccccCCCcCCC
Q 035786 360 FSLIDLSSNYFQGTVADDRGR--NVSLGRNCLQS 391 (693)
Q Consensus 360 l~~ldLs~N~l~g~ip~~~~~--~~~l~~n~l~g 391 (693)
++.+....+.+.+..|..+.. ...++.+.|+|
T Consensus 250 l~~~~~~~~~~~C~~p~~l~g~~l~~l~~~~l~g 283 (284)
T d1ozna_ 250 LQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQG 283 (284)
T ss_dssp HHHCCSEECCCBEEESGGGTTCBGGGSCGGGSCC
T ss_pred HHhCcCCCCceEeCCchHHcCCccccCCHHHCCC
Confidence 444556667788877776532 23444444443
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=3e-26 Score=242.37 Aligned_cols=161 Identities=19% Similarity=0.255 Sum_probs=122.8
Q ss_pred CCCCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccC---HHHHHHHHHHHhcCCCCCccceeEEEEcC-----CCe
Q 035786 512 GNFSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFK---KESYMMELDLFSRVSHARLVPLLGQCLEH-----ETE 582 (693)
Q Consensus 512 ~~~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~---~~~f~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~ 582 (693)
++|...++||+|+||+||+|.. .+|+.||||++...... .+.+.+|++++++++|||||++++++... ...
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 4588889999999999999996 46999999999754333 34688999999999999999999988632 246
Q ss_pred eEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCceEECC
Q 035786 583 KLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGS 662 (693)
Q Consensus 583 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~~ki~D 662 (693)
.|+||||+.+|.+. .++ ..+++.....++.||+.||+|||+. +|+||||||+|||++.++..|++|
T Consensus 97 ~~iv~Ey~~~~l~~-~~~----------~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~d 162 (355)
T d2b1pa1 97 VYLVMELMDANLCQ-VIQ----------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 162 (355)
T ss_dssp EEEEEECCSEEHHH-HHT----------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred eEEEEeccchHHHH-hhh----------cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeec
Confidence 79999999765554 443 2488999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCcceeeeeehhhhhhh
Q 035786 663 LSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 663 fgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
||+++....... .+..++|+.|+|
T Consensus 163 f~~~~~~~~~~~--~~~~~~t~~y~a 186 (355)
T d2b1pa1 163 FGLARTAGTSFM--MTPYVVTRYYRA 186 (355)
T ss_dssp CCC-----------------CCTTCC
T ss_pred hhhhhccccccc--cccccccccccC
Confidence 999988744332 344566666664
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.92 E-value=3.6e-24 Score=221.39 Aligned_cols=226 Identities=26% Similarity=0.351 Sum_probs=184.0
Q ss_pred CCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEE
Q 035786 93 TLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLD 172 (693)
Q Consensus 93 ~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 172 (693)
+.+++|++++|.++.--+..|. .+++|++|++++|.+....|..|.++++|++|++++|+++. +|..+ ...|+.|+
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~-~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~-l~~~~--~~~l~~L~ 106 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFK-NLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKM--PKTLQELR 106 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTT-TCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSC--CTTCCEEE
T ss_pred CCCCEEECcCCcCCCcChhHhh-ccccccccccccccccccchhhhhCCCccCEecccCCccCc-Cccch--hhhhhhhh
Confidence 4688999999988743334565 58999999999999998888889999999999999999984 55443 35789999
Q ss_pred ccCCCCCCcCchhhhcCcCCCeeecccccCC--CcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcC
Q 035786 173 LSRNLLTGEIPNAISLLGNLTRLNLASNFFT--GQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSI 250 (693)
Q Consensus 173 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 250 (693)
++.|.+.+..+..+.....+..++...|... ...+..+..+++|+.+++++|.++. +|..+ +++|+.|++++|..
T Consensus 107 ~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~-l~~~~--~~~L~~L~l~~n~~ 183 (305)
T d1xkua_ 107 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGL--PPSLTELHLDGNKI 183 (305)
T ss_dssp CCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSC--CTTCSEEECTTSCC
T ss_pred ccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc-cCccc--CCccCEEECCCCcC
Confidence 9999998776667777888888888887543 3445667888999999999999874 55443 57899999999999
Q ss_pred cccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCC
Q 035786 251 SGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 251 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p 328 (693)
++..+..+.+++.+++|++++|.+++..+ ..|..+++|++|+|++|+|+ .+|.++..+++|++|+|++|+|+ .++
T Consensus 184 ~~~~~~~~~~~~~l~~L~~s~n~l~~~~~-~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~-~i~ 258 (305)
T d1xkua_ 184 TKVDAASLKGLNNLAKLGLSFNSISAVDN-GSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS-AIG 258 (305)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECT-TTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC-CCC
T ss_pred CCCChhHhhcccccccccccccccccccc-ccccccccceeeeccccccc-ccccccccccCCCEEECCCCccC-ccC
Confidence 98888999999999999999999986444 55678889999999999998 46778888999999999999988 444
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.92 E-value=5e-24 Score=226.95 Aligned_cols=277 Identities=24% Similarity=0.323 Sum_probs=158.7
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
..++.|++++.... .++.+..|++|++|++++|.+++ +|+ +. .+++|++|++++|.+.+.. .++++
T Consensus 44 ~~l~~L~l~~~~I~---------~l~gl~~L~nL~~L~Ls~N~l~~-l~~-l~-~L~~L~~L~L~~n~i~~i~--~l~~l 109 (384)
T d2omza2 44 DQVTTLQADRLGIK---------SIDGVEYLNNLTQINFSNNQLTD-ITP-LK-NLTKLVDILMNNNQIADIT--PLANL 109 (384)
T ss_dssp TTCCEEECCSSCCC---------CCTTGGGCTTCCEEECCSSCCCC-CGG-GT-TCTTCCEEECCSSCCCCCG--GGTTC
T ss_pred CCCCEEECCCCCCC---------CccccccCCCCCEEeCcCCcCCC-Ccc-cc-CCccccccccccccccccc--ccccc
Confidence 46888999875422 12467789999999999999886 443 55 5999999999999998653 38899
Q ss_pred ccCCEEecccCcCCccCc--------------------------------------------------------------
Q 035786 142 SRLNVLYLSGNSLAGNVP-------------------------------------------------------------- 159 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p-------------------------------------------------------------- 159 (693)
++|+.|++++|.+++..+
T Consensus 110 ~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (384)
T d2omza2 110 TNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD 189 (384)
T ss_dssp TTCCEEECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccc
Confidence 999999999888764321
Q ss_pred -cccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCC
Q 035786 160 -ATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLD 238 (693)
Q Consensus 160 -~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 238 (693)
..+..+++++.+++++|.+++..| +...++|+.|++++|.++. + +.+..+++|+.|++++|.+++.. .++.++
T Consensus 190 ~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~ 263 (384)
T d2omza2 190 ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLA--PLSGLT 263 (384)
T ss_dssp CGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCG--GGTTCT
T ss_pred ccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCC--cccccc
Confidence 122334445555555555554322 2334455555555555542 2 23445555555555555555432 244455
Q ss_pred CCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEc
Q 035786 239 KLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDL 318 (693)
Q Consensus 239 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~L 318 (693)
+|++|++++|.+++.. .+..++.++.++++.|.+++. +. +..+++++.|++++|++++..| +..+++|+.|++
T Consensus 264 ~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~-~~--~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L 336 (384)
T d2omza2 264 KLTELKLGANQISNIS--PLAGLTALTNLELNENQLEDI-SP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 336 (384)
T ss_dssp TCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC-GG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEEC
T ss_pred cCCEeeccCcccCCCC--ccccccccccccccccccccc-cc--cchhcccCeEECCCCCCCCCcc--cccCCCCCEEEC
Confidence 5555555555554332 244455555555555555431 11 2344555555555555554322 444555555555
Q ss_pred cCCcCcccCCccCcCCCCCCcEEEccCCccceecCCCCCCCCCEEEccCC
Q 035786 319 SRNNITGSWPILSTNGNASGAVFNISNNMLYGDLNSSSFRKFSLIDLSSN 368 (693)
Q Consensus 319 s~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~~~~~~~~l~~ldLs~N 368 (693)
++|+|++ +| .+..+++|++|++++|++++..|...+++|+.|+|++|
T Consensus 337 ~~n~l~~-l~--~l~~l~~L~~L~l~~N~l~~l~~l~~l~~L~~L~L~~N 383 (384)
T d2omza2 337 ANNKVSD-VS--SLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ 383 (384)
T ss_dssp CSSCCCC-CG--GGGGCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCCE
T ss_pred CCCCCCC-Ch--hHcCCCCCCEEECCCCcCCCChhhccCCCCCEeeCCCC
Confidence 5555553 22 13445555555555555555444445555555555554
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.92 E-value=1.2e-23 Score=217.41 Aligned_cols=267 Identities=25% Similarity=0.315 Sum_probs=219.5
Q ss_pred CEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccC
Q 035786 96 SSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSR 175 (693)
Q Consensus 96 ~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 175 (693)
+.++-+++.++ .+|..+ .+.+++|+|++|+++...+..|.++++|++|++++|.+....|..|.++++|++|++++
T Consensus 13 ~~~~C~~~~L~-~lP~~l---~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 13 RVVQCSDLGLE-KVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 88 (305)
T ss_dssp TEEECTTSCCC-SCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCC-ccCCCC---CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccC
Confidence 33444444444 566654 36799999999999976667899999999999999999988899999999999999999
Q ss_pred CCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcc--cccCCccccCCCCCCEEEccCCcCccc
Q 035786 176 NLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNAL--TGFIPSEVGNLDKLIELDLSKNSISGS 253 (693)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l--~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 253 (693)
|+++ .+|..+ ...++.|++..|.+.+..+..+.....++.++...|.. ....+..+..+++|+.+++++|.++.
T Consensus 89 n~l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~- 164 (305)
T d1xkua_ 89 NQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT- 164 (305)
T ss_dssp SCCS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-
T ss_pred CccC-cCccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc-
Confidence 9998 456543 46889999999999877777777888899999988854 34456678889999999999999984
Q ss_pred CchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcC
Q 035786 254 LPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTN 333 (693)
Q Consensus 254 ~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~ 333 (693)
+|.. .+++|++|++++|..++..+. .|..++.++.|++++|.+++..+.++..+++|++|+|++|+|+ .+|. .+.
T Consensus 165 l~~~--~~~~L~~L~l~~n~~~~~~~~-~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~-~l~ 239 (305)
T d1xkua_ 165 IPQG--LPPSLTELHLDGNKITKVDAA-SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG-GLA 239 (305)
T ss_dssp CCSS--CCTTCSEEECTTSCCCEECTG-GGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT-TTT
T ss_pred cCcc--cCCccCEEECCCCcCCCCChh-Hhhccccccccccccccccccccccccccccceeeeccccccc-cccc-ccc
Confidence 4543 367999999999999877665 4688999999999999999999999999999999999999998 6775 567
Q ss_pred CCCCCcEEEccCCccceecCC---------CCCCCCCEEEccCCcce-eecCC
Q 035786 334 GNASGAVFNISNNMLYGDLNS---------SSFRKFSLIDLSSNYFQ-GTVAD 376 (693)
Q Consensus 334 ~~~~l~~l~ls~N~l~g~~~~---------~~~~~l~~ldLs~N~l~-g~ip~ 376 (693)
.++.|++|+|++|+++. ++. ....+|+.|+|++|+++ +.+++
T Consensus 240 ~l~~L~~L~Ls~N~i~~-i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~~~ 291 (305)
T d1xkua_ 240 DHKYIQVVYLHNNNISA-IGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQP 291 (305)
T ss_dssp TCSSCCEEECCSSCCCC-CCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCG
T ss_pred cccCCCEEECCCCccCc-cChhhccCcchhcccCCCCEEECCCCcCccCcCCH
Confidence 78999999999999974 432 23467889999999885 45543
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.91 E-value=2.7e-23 Score=221.15 Aligned_cols=265 Identities=25% Similarity=0.363 Sum_probs=180.4
Q ss_pred ccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCC
Q 035786 90 GNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLS 169 (693)
Q Consensus 90 ~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 169 (693)
..+..|+.|+++++.+.. + +.+.. |++|++|+|++|++++.. .|+++++|++|++++|.+.+..| ++++++|+
T Consensus 41 ~~l~~l~~L~l~~~~I~~-l-~gl~~-L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i~~--l~~l~~L~ 113 (384)
T d2omza2 41 TDLDQVTTLQADRLGIKS-I-DGVEY-LNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITP--LANLTNLT 113 (384)
T ss_dssp HHHTTCCEEECCSSCCCC-C-TTGGG-CTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GTTCTTCC
T ss_pred HHhCCCCEEECCCCCCCC-c-ccccc-CCCCCEEeCcCCcCCCCc--cccCCcccccccccccccccccc--cccccccc
Confidence 456789999999998763 4 34554 999999999999999753 39999999999999999986533 89999999
Q ss_pred EEEccCCCCCCcCc---------------------------------------------------------------hhh
Q 035786 170 NLDLSRNLLTGEIP---------------------------------------------------------------NAI 186 (693)
Q Consensus 170 ~L~Ls~N~l~~~~p---------------------------------------------------------------~~~ 186 (693)
.|++++|.+++..+ ..+
T Consensus 114 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (384)
T d2omza2 114 GLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVL 193 (384)
T ss_dssp EEECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGG
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccccccc
Confidence 99999988764211 123
Q ss_pred hcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccc
Q 035786 187 SLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAK 266 (693)
Q Consensus 187 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 266 (693)
..+++++.+++++|.+++..| +..+++|+.|++++|+++. + +.+..+++|+.|++++|.+++..+ +..+++|++
T Consensus 194 ~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~ 267 (384)
T d2omza2 194 AKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTE 267 (384)
T ss_dssp GGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSE
T ss_pred ccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCCc--ccccccCCE
Confidence 344566666666666665433 3445667777777776664 2 346666677777777777665433 566667777
Q ss_pred cccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCC
Q 035786 267 LVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNN 346 (693)
Q Consensus 267 L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N 346 (693)
|++++|.+++..+ +..++.++.++++.|++++. ..+..+++++.|++++|++++..| +..+++|+.|++++|
T Consensus 268 L~l~~~~l~~~~~---~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~~---l~~l~~L~~L~L~~n 339 (384)
T d2omza2 268 LKLGANQISNISP---LAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDISP---VSSLTKLQRLFFANN 339 (384)
T ss_dssp EECCSSCCCCCGG---GTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCGG---GGGCTTCCEEECCSS
T ss_pred eeccCcccCCCCc---cccccccccccccccccccc--cccchhcccCeEECCCCCCCCCcc---cccCCCCCEEECCCC
Confidence 7777776664322 35566677777777776652 235566777777777777775432 345667777777777
Q ss_pred ccceecCCCCCCCCCEEEccCCcceeecC
Q 035786 347 MLYGDLNSSSFRKFSLIDLSSNYFQGTVA 375 (693)
Q Consensus 347 ~l~g~~~~~~~~~l~~ldLs~N~l~g~ip 375 (693)
++++......+++|+.||+++|++++-.|
T Consensus 340 ~l~~l~~l~~l~~L~~L~l~~N~l~~l~~ 368 (384)
T d2omza2 340 KVSDVSSLANLTNINWLSAGHNQISDLTP 368 (384)
T ss_dssp CCCCCGGGGGCTTCCEEECCSSCCCBCGG
T ss_pred CCCCChhHcCCCCCCEEECCCCcCCCChh
Confidence 77642222556677777777777776443
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=8.5e-23 Score=206.74 Aligned_cols=203 Identities=26% Similarity=0.256 Sum_probs=117.7
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
...+...|.+++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+|+ .
T Consensus 9 ~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~--------------- 69 (266)
T d1p9ag_ 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-K--------------- 69 (266)
T ss_dssp STTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-E---------------
T ss_pred cCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-c---------------
Confidence 334444455555555 2444332 34555555555555443444555555555555555544 2
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+| .++.+++|+.|+|++|++++ +|..+.++++|+.|++++|.+.+..+..+..+.++++|++++|.++
T Consensus 70 ---------l~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~- 137 (266)
T d1p9ag_ 70 ---------LQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK- 137 (266)
T ss_dssp ---------EE-CCSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC-
T ss_pred ---------cc-cccccccccccccccccccc-cccccccccccccccccccccceeeccccccccccccccccccccc-
Confidence 22 13445555555555555553 3444555556666666666655555555556666666666666665
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCccceec
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNMLYGDL 352 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~l~g~~ 352 (693)
.++...+..+++|+.+++++|++++..+..+..+++|++|+|++|+|+ .+|.. +..+.+|+.|+|++|.|.+++
T Consensus 138 ~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~-~~~~~~L~~L~L~~Np~~CdC 211 (266)
T d1p9ag_ 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKG-FFGSHLLPFAFLHGNPWLCNC 211 (266)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTT-TTTTCCCSEEECCSCCBCCSG
T ss_pred eeccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChh-HCCCCCCCEEEecCCCCCCCc
Confidence 344455566777777777777777766677777777777777777777 66643 345566777777777776654
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=8.6e-23 Score=206.69 Aligned_cols=203 Identities=27% Similarity=0.301 Sum_probs=151.5
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKK 167 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 167 (693)
...+.+.+...+.+++.++ .||+.+ -++|++|+|++|.|++..+..|.++++|++|+|++|+|+. +| .++.+++
T Consensus 5 ~~~~~~~~~~v~C~~~~L~-~iP~~l---p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~ 78 (266)
T d1p9ag_ 5 EVSKVASHLEVNCDKRNLT-ALPPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPV 78 (266)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCC---CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTT
T ss_pred EEcccCCCeEEEccCCCCC-eeCcCc---CcCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-ccccccc
Confidence 3456677778899999988 588755 2579999999999998777899999999999999999984 44 4678999
Q ss_pred CCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 035786 168 LSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSK 247 (693)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 247 (693)
|++|+|++|++++ +|..+..+++|+.|++++|.+.+..+..+..+.+++.|++++|.++...+..+..+++|+.|++++
T Consensus 79 L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~ 157 (266)
T d1p9ag_ 79 LGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (266)
T ss_dssp CCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred ccccccccccccc-cccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccc
Confidence 9999999999984 466778888888888888888776667777778888888888887776666677777777777777
Q ss_pred CcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcC
Q 035786 248 NSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKL 299 (693)
Q Consensus 248 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l 299 (693)
|++++..+..|..+++|++|+|++|+|+ .+|+.+| .+++|+.|+|++|.+
T Consensus 158 N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~-~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFF-GSHLLPFAFLHGNPW 207 (266)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTT-TTCCCSEEECCSCCB
T ss_pred ccccccCccccccccccceeecccCCCc-ccChhHC-CCCCCCEEEecCCCC
Confidence 7777666555655555555555555555 4444432 344444444444444
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.84 E-value=6.1e-22 Score=209.64 Aligned_cols=164 Identities=19% Similarity=0.273 Sum_probs=125.7
Q ss_pred CCccCccccCCeeeEEEEEe-CCCcEEEEEEecccccCHHHHHHHHHHHhcCC-----------CCCccceeEEEEc-CC
Q 035786 514 FSETNLIKKGHSGDLFKGTL-AGGTTVVVKKVSLHSFKKESYMMELDLFSRVS-----------HARLVPLLGQCLE-HE 580 (693)
Q Consensus 514 ~~~~~~ig~G~~G~Vy~~~~-~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~-----------H~niv~l~g~~~~-~~ 580 (693)
|...++||+|+||+||+|+. .+|+.||||++.......+.+.+|++++.+++ |+|||++++++.. ..
T Consensus 15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~ 94 (362)
T d1q8ya_ 15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP 94 (362)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEET
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccc
Confidence 66788999999999999996 57999999999765544567889999998876 4779999988753 23
Q ss_pred CeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCC----
Q 035786 581 TEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKF---- 656 (693)
Q Consensus 581 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~---- 656 (693)
...+++++++..+........... ...+++.....++.+|+.||+|||+.. +|+||||||+|||++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~i~~qil~al~~lh~~~--~IvHrDlKp~NIll~~~~~~~~ 167 (362)
T d1q8ya_ 95 NGVHVVMVFEVLGENLLALIKKYE-----HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 167 (362)
T ss_dssp TEEEEEEEECCCCEEHHHHHHHTT-----TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred cceeeeeeeccccccccccccccc-----ccCCcHHHHHHHHHHHHHHHHHHhhhc--CcccccCChhHeeeeccCcccc
Confidence 456677777766554433332211 245888899999999999999999732 899999999999998664
Q ss_pred --ceEECCcccccccCCCCcceeeeeehhhhhhh
Q 035786 657 --EVRLGSLSELHAQGDSHQNVLTRFLWRQLYQS 688 (693)
Q Consensus 657 --~~ki~Dfgla~~~~~~~~~~~~~~~~~~~y~a 688 (693)
.+|++|||.++...... ...+||+.|+|
T Consensus 168 ~~~~kl~dfg~s~~~~~~~----~~~~gt~~y~a 197 (362)
T d1q8ya_ 168 LIQIKIADLGNACWYDEHY----TNSIQTREYRS 197 (362)
T ss_dssp EEEEEECCCTTCEETTBCC----CSCCSCGGGCC
T ss_pred cceeeEeeccccccccccc----ccccccccccC
Confidence 39999999998764332 23567777765
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.84 E-value=3.7e-21 Score=184.38 Aligned_cols=130 Identities=12% Similarity=0.122 Sum_probs=103.3
Q ss_pred cCccccCCeeeEEEEEeCCCcEEEEEEeccccc--------------C-----HHHHHHHHHHHhcCCCCCccceeEEEE
Q 035786 517 TNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF--------------K-----KESYMMELDLFSRVSHARLVPLLGQCL 577 (693)
Q Consensus 517 ~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~--------------~-----~~~f~~Ei~~l~~l~H~niv~l~g~~~ 577 (693)
.+.||+|+||.||+|+..+|+.||||.+..... . ...+.+|.+.+.+++|.+++..+++.
T Consensus 5 g~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~- 83 (191)
T d1zara2 5 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE- 83 (191)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE-
T ss_pred CCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec-
Confidence 578999999999999988899999998643110 0 12456788999999999999887542
Q ss_pred cCCCeeEEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 035786 578 EHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFE 657 (693)
Q Consensus 578 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~~p~iiHrDlk~~NILld~~~~ 657 (693)
..++||||++++.+.+ +++....+++.++++|++|||+. +|+||||||+|||++++ .
T Consensus 84 ----~~~lvme~~~~~~~~~---------------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~ 140 (191)
T d1zara2 84 ----GNAVLMELIDAKELYR---------------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-G 140 (191)
T ss_dssp ----TTEEEEECCCCEEGGG---------------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-E
T ss_pred ----CCEEEEEeeccccccc---------------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-C
Confidence 2379999999865543 22233457899999999999998 99999999999999965 5
Q ss_pred eEECCcccccccC
Q 035786 658 VRLGSLSELHAQG 670 (693)
Q Consensus 658 ~ki~Dfgla~~~~ 670 (693)
+++.|||.|+...
T Consensus 141 ~~liDFG~a~~~~ 153 (191)
T d1zara2 141 IWIIDFPQSVEVG 153 (191)
T ss_dssp EEECCCTTCEETT
T ss_pred EEEEECCCcccCC
Confidence 8999999998764
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=1.3e-18 Score=172.79 Aligned_cols=199 Identities=19% Similarity=0.161 Sum_probs=125.6
Q ss_pred CCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCc-cccCCCCCCCEEEccC-CCCCCcCchhhhcCcCCCee
Q 035786 118 PALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVP-ATLGELKKLSNLDLSR-NLLTGEIPNAISLLGNLTRL 195 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 195 (693)
+++++|||++|.++...+..|.++++|++|+|++|.+...+| ..|.+++++++|++.. |.+....+..+..+++|++|
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccccc
Confidence 467788888888776555567778888888888887765443 3577777888877653 56666666667777788888
Q ss_pred ecccccCCCcCc-ccccCCCCCCEEEccCCcccccCCccccCCC-CCCEEEccCCcCcccCchhhhcCccccc-cccccc
Q 035786 196 NLASNFFTGQIP-SGLYSLSSIQFLNLSDNALTGFIPSEVGNLD-KLIELDLSKNSISGSLPLELRGLRNLAK-LVISEN 272 (693)
Q Consensus 196 ~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~-L~Ls~N 272 (693)
++++|.+....+ ..+..+..+..+..+++++....+..|..++ .++.|++++|+++...+..+. ..++++ +++++|
T Consensus 109 ~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~-~~~l~~~~~l~~n 187 (242)
T d1xwdc1 109 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFN-GTQLDELNLSDNN 187 (242)
T ss_dssp EEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTT-TCCEEEEECTTCT
T ss_pred ccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccccccccccc-chhhhcccccccc
Confidence 887777764322 1233445555556666666655555555554 677777777777754443333 334333 345666
Q ss_pred cccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEc
Q 035786 273 GLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDL 318 (693)
Q Consensus 273 ~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~L 318 (693)
+++ .+|...|..+++|+.|++++|+++...+..+..+++|+.+++
T Consensus 188 ~l~-~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 188 NLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp TCC-CCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSE
T ss_pred ccc-cccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcC
Confidence 665 466666667777777777777776544444555555555444
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.75 E-value=5.8e-18 Score=166.45 Aligned_cols=185 Identities=28% Similarity=0.369 Sum_probs=90.1
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+.+|+.|++.+|.++. ++ .+.++++|++|++++|.+++..| +..+++|+++++++|.++ .++ .+..+++|+.++
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~ 113 (227)
T d1h6ua2 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLD 113 (227)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEE
T ss_pred cCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--cccccccccccccccccc-ccc-cccccccccccc
Confidence 5566666666666653 32 35566666666666666654332 556666666666666555 222 345555556665
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
++++...+. ..+...+.++.+.++.+.+.... .+.++++|+.|++++|.++... .+.++++|++|+|++|++++
T Consensus 114 l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~ 187 (227)
T d1h6ua2 114 LTSTQITDV--TPLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD 187 (227)
T ss_dssp CTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC
T ss_pred ccccccccc--chhccccchhhhhchhhhhchhh--hhccccccccccccccccccch--hhcccccceecccCCCccCC
Confidence 555554432 12344455555555555544321 2444455555555555544321 14444444444444444432
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEc
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDL 318 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~L 318 (693)
++. +..+++|++|++++|++++..| +..+++|+.|++
T Consensus 188 -l~~--l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~l 224 (227)
T d1h6ua2 188 -ISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224 (227)
T ss_dssp -CGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEE
T ss_pred -Chh--hcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEe
Confidence 221 2334444444444444443211 334444444444
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.74 E-value=1.8e-16 Score=165.36 Aligned_cols=270 Identities=22% Similarity=0.231 Sum_probs=156.6
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.+.+.+||++... ..+|. .+++|++|++++|.++ .+|+. +.+|+.|++++|+++. ++. + .
T Consensus 38 ~~l~~LdLs~~~L---~~lp~--------~~~~L~~L~Ls~N~l~-~lp~~----~~~L~~L~l~~n~l~~-l~~-l--p 97 (353)
T d1jl5a_ 38 RQAHELELNNLGL---SSLPE--------LPPHLESLVASCNSLT-ELPEL----PQSLKSLLVDNNNLKA-LSD-L--P 97 (353)
T ss_dssp HTCSEEECTTSCC---SCCCS--------CCTTCSEEECCSSCCS-SCCCC----CTTCCEEECCSSCCSC-CCS-C--C
T ss_pred cCCCEEEeCCCCC---CCCCC--------CCCCCCEEECCCCCCc-ccccc----hhhhhhhhhhhcccch-hhh-h--c
Confidence 3567788887543 23432 2356788888888877 67753 5678888888888763 332 1 1
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEc
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNL 221 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 221 (693)
+.|++|++++|.+. .+|. ++.+++|++|++++|.+... |.. ...+..+.+..+... .+..+..++.++.|++
T Consensus 98 ~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~-~~~---~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l 169 (353)
T d1jl5a_ 98 PLLEYLGVSNNQLE-KLPE-LQNSSFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNNQLE--ELPELQNLPFLTAIYA 169 (353)
T ss_dssp TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCS--SCCCCTTCTTCCEEEC
T ss_pred cccccccccccccc-cccc-hhhhccceeecccccccccc-ccc---cccccchhhcccccc--ccccccccccceeccc
Confidence 35888888888887 4554 57788888888888887643 322 345666666655543 3455677888888988
Q ss_pred cCCcccccCC------------------ccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCCCccc
Q 035786 222 SDNALTGFIP------------------SEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLF 283 (693)
Q Consensus 222 s~N~l~g~~p------------------~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~ 283 (693)
++|.+..... ..+..++.|+.+++++|.... +|.. ..++..+.+.+|.+... +
T Consensus 170 ~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~~~~-~~~~---~~~l~~~~~~~~~~~~~-~---- 240 (353)
T d1jl5a_ 170 DNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDL-P---- 240 (353)
T ss_dssp CSSCCSSCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCC-C----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc-cccc---ccccccccccccccccc-c----
Confidence 8887653211 123345556666666655442 2221 23344444444444321 1
Q ss_pred CCCCCCCEEEccCCcCCC----------------cCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCc
Q 035786 284 PTLDQLQVVDLSGNKLDG----------------ALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNM 347 (693)
Q Consensus 284 ~~l~~L~~L~Ls~N~l~g----------------~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~ 347 (693)
.....+...++..|.+.+ .++.....+++|++|+|++|+|+ .+|. ..++|+.|++++|+
T Consensus 241 ~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~----~~~~L~~L~L~~N~ 315 (353)
T d1jl5a_ 241 ELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPA----LPPRLERLIASFNH 315 (353)
T ss_dssp CCCTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSC
T ss_pred cccccccccccccccccccccccchhcccccccCccccccccCCCCCEEECCCCccC-cccc----ccCCCCEEECCCCc
Confidence 111223333333332221 11111223467777777777776 4552 24567777777777
Q ss_pred cceecCCCCCCCCCEEEccCCcceeecCC
Q 035786 348 LYGDLNSSSFRKFSLIDLSSNYFQGTVAD 376 (693)
Q Consensus 348 l~g~~~~~~~~~l~~ldLs~N~l~g~ip~ 376 (693)
++ .+|. .+++|+.|++++|+++ .+|+
T Consensus 316 L~-~l~~-~~~~L~~L~L~~N~L~-~lp~ 341 (353)
T d1jl5a_ 316 LA-EVPE-LPQNLKQLHVEYNPLR-EFPD 341 (353)
T ss_dssp CS-CCCC-CCTTCCEEECCSSCCS-SCCC
T ss_pred CC-cccc-ccCCCCEEECcCCcCC-CCCc
Confidence 76 4553 3456777777777765 4543
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.74 E-value=5.5e-18 Score=162.07 Aligned_cols=172 Identities=24% Similarity=0.321 Sum_probs=106.7
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccC-ccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNV-PATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 199 (693)
+.++.++++++ .+|..+. +++++|+|++|+|++.+ +..|.++++|++|+|++|.+.+..+..+..+++|++|+|++
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 34556666655 4454442 45666666666665433 44556677777777777777666666666677777777777
Q ss_pred ccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCC
Q 035786 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLS 279 (693)
Q Consensus 200 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~ 279 (693)
|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+....+... -...++.+.+..|.++...|
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~-~~~~l~~~~l~~~~~~c~~p 166 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCSS
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHH-HhhhhhhhcccCCCeEeCCC
Confidence 77776666667777777777777777777777777777777788887777765433211 12235555666666654444
Q ss_pred CcccCCCCCCCEEEccCCcCC
Q 035786 280 EGLFPTLDQLQVVDLSGNKLD 300 (693)
Q Consensus 280 ~~~~~~l~~L~~L~Ls~N~l~ 300 (693)
. .+..++.++++.|.++
T Consensus 167 ~----~l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 167 S----KVRDVQIKDLPHSEFK 183 (192)
T ss_dssp T----TTTTSBGGGSCTTTCC
T ss_pred h----hhcCCEeeecCHhhCc
Confidence 2 2334445555555554
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=6.1e-18 Score=167.75 Aligned_cols=211 Identities=17% Similarity=0.198 Sum_probs=137.9
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCc-hhhhcCcCCCeeeccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIP-NAISLLGNLTRLNLAS 199 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~ 199 (693)
+.++.+++.++ .+|+.+. +++++|+|++|+++...+..|.++++|++|++++|.+...+| ..|..++++++|.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 56777777777 6666553 578899999998886556678888999999999988876554 4577788888887754
Q ss_pred -ccCCCcCcccccCCCCCCEEEccCCcccccCCc-cccCCCCCCEEEccCCcCcccCchhhhcCc-cccccccccccccc
Q 035786 200 -NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPS-EVGNLDKLIELDLSKNSISGSLPLELRGLR-NLAKLVISENGLEG 276 (693)
Q Consensus 200 -N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g 276 (693)
|.+....+..+.++++|+.|++++|+++...+. .+..+..+..+..+++.+....+..+.+++ .++.|++++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~- 166 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ- 166 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-
T ss_pred cccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccc-
Confidence 567666677788888888888888887643221 233445555555666666655555555554 5666777777776
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCC
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNA 336 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~ 336 (693)
.++...|.....++.+++++|+++...+..|..+++|++|+|++|+|+ .+|...+..+.
T Consensus 167 ~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~~l~ 225 (242)
T d1xwdc1 167 EIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLK 225 (242)
T ss_dssp EECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCC-CCCSSSCTTCC
T ss_pred ccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCC-ccCHHHHcCCc
Confidence 344444433222333345666666544445566677777777777776 45543333333
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.74 E-value=1.1e-17 Score=164.51 Aligned_cols=208 Identities=22% Similarity=0.320 Sum_probs=153.9
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+.++..++++.+.+++.+ .+..+.+|+.|++.+|.++. ++ .+..+++|++|++++|.+++..| +..+++|++++
T Consensus 18 l~~~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~ 91 (227)
T d1h6ua2 18 LANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELE 91 (227)
T ss_dssp HHHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEE
T ss_pred HHHHHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--ccccccccccc
Confidence 334445667777777654 45678889999999999884 44 58889999999999999986543 78889999999
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++|.++. ++ .+..+++|+.++++++...+. ..+...+.++.+.++.+.+.... .+.++++|+.|++++|.+++
T Consensus 92 ~~~n~~~~-i~-~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~ 165 (227)
T d1h6ua2 92 LSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSD 165 (227)
T ss_dssp CCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCC
T ss_pred cccccccc-cc-ccccccccccccccccccccc--chhccccchhhhhchhhhhchhh--hhcccccccccccccccccc
Confidence 99998873 43 577889999999998887754 34667788888888888887543 36677888888888888764
Q ss_pred cCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEcc
Q 035786 277 QLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNIS 344 (693)
Q Consensus 277 ~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls 344 (693)
..+ +..+++|+.|++++|++++. | .+..+++|++|+|++|++++ +|. +..+..|+.|+++
T Consensus 166 ~~~---l~~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~-i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 166 LTP---LANLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISD-VSP--LANTSNLFIVTLT 225 (227)
T ss_dssp CGG---GTTCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCB-CGG--GTTCTTCCEEEEE
T ss_pred chh---hcccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCC-Ccc--cccCCCCCEEEee
Confidence 322 46778888888888888753 3 36677888888888888874 331 3455666666665
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.72 E-value=3.9e-18 Score=163.15 Aligned_cols=131 Identities=25% Similarity=0.300 Sum_probs=97.7
Q ss_pred CCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcC-chhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEcc
Q 035786 144 LNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEI-PNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLS 222 (693)
Q Consensus 144 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 222 (693)
.++++.++++++ .+|..+. +++++|+|++|+|++.+ +..|..+++|+.|+|++|.+.+..+..+..+++|++|+|+
T Consensus 10 ~~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 10 GTTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeec
Confidence 457788888887 5666553 57888888888887644 4556778888888888888877777777778888888888
Q ss_pred CCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccccc
Q 035786 223 DNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQ 277 (693)
Q Consensus 223 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 277 (693)
+|+++...|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+...
T Consensus 87 ~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~ 141 (192)
T d1w8aa_ 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred cccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccc
Confidence 8888877777777788888888888888776676677777777777777766543
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.71 E-value=4e-17 Score=158.34 Aligned_cols=178 Identities=25% Similarity=0.344 Sum_probs=87.7
Q ss_pred ccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCC
Q 035786 100 ASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLT 179 (693)
Q Consensus 100 ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 179 (693)
+..+.+.+.++.. .+.+|++|++++|.++.. + .+..+++|++|+|++|++++. + .++.+++|++|++++|+++
T Consensus 31 l~~~~~~~~~~~~---~L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~ 103 (210)
T d1h6ta2 31 LKKKSVTDAVTQN---ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVK 103 (210)
T ss_dssp TTCSCTTSEECHH---HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC
T ss_pred hCcCccCCccCHH---HhcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCc-c-ccccCcccccccccccccc
Confidence 3444444444432 144566666666665532 2 245556666666666665542 2 2455555666666655555
Q ss_pred CcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhh
Q 035786 180 GEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELR 259 (693)
Q Consensus 180 ~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 259 (693)
+ +| .+..+++|+.|++++|.+.. + ..+..+++|+.+++++|.+++ +..+..
T Consensus 104 ~-l~-~l~~l~~L~~L~l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~--~~~~~~----------------------- 154 (210)
T d1h6ta2 104 D-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITD--ITVLSR----------------------- 154 (210)
T ss_dssp C-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCC--CGGGGG-----------------------
T ss_pred c-cc-cccccccccccccccccccc-c-ccccccccccccccccccccc--cccccc-----------------------
Confidence 3 33 34455555555555554432 1 234444455555555554442 122334
Q ss_pred cCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEcc
Q 035786 260 GLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLS 319 (693)
Q Consensus 260 ~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls 319 (693)
+++|+++++++|++++ +++ +.++++|+.|++++|+++. +| .+..+++|++|+|+
T Consensus 155 -l~~L~~l~l~~n~l~~-i~~--l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 155 -LTKLDTLSLEDNQISD-IVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp -CTTCSEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred -cccccccccccccccc-ccc--ccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEcc
Confidence 4444444444444442 211 3445555556666665553 33 35556666666654
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.70 E-value=5.2e-17 Score=157.50 Aligned_cols=165 Identities=24% Similarity=0.332 Sum_probs=111.6
Q ss_pred CCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEE
Q 035786 165 LKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELD 244 (693)
Q Consensus 165 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 244 (693)
+.+|++|++++|.++.. + .+..+++|++|++++|++++. + .++.+++|+.|++++|++++ +| .+.++++|+.|+
T Consensus 45 L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (210)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred hcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCc-c-ccccCccccccccccccccc-cc-cccccccccccc
Confidence 34555555555555432 2 245555666666666665542 2 24566666666666666664 33 366667777777
Q ss_pred ccCCcCcccCchhhhcCccccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCc
Q 035786 245 LSKNSISGSLPLELRGLRNLAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNIT 324 (693)
Q Consensus 245 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~ 324 (693)
+++|.+.. + ..+..+++|+.+++++|.+++.. .+..+++|+.+++++|++++.. .+..+++|+.|+|++|+|+
T Consensus 119 l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~~~---~~~~l~~L~~l~l~~n~l~~i~--~l~~l~~L~~L~Ls~N~i~ 191 (210)
T d1h6ta2 119 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDIT---VLSRLTKLDTLSLEDNQISDIV--PLAGLTKLQNLYLSKNHIS 191 (210)
T ss_dssp CTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCCG---GGGGCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred cccccccc-c-ccccccccccccccccccccccc---cccccccccccccccccccccc--cccCCCCCCEEECCCCCCC
Confidence 77776653 2 34667777777777777776422 2467889999999999998743 3788999999999999998
Q ss_pred ccCCccCcCCCCCCcEEEccC
Q 035786 325 GSWPILSTNGNASGAVFNISN 345 (693)
Q Consensus 325 g~~p~~~~~~~~~l~~l~ls~ 345 (693)
. +| .+..+++|++|+|++
T Consensus 192 ~-l~--~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 192 D-LR--ALAGLKNLDVLELFS 209 (210)
T ss_dssp B-CG--GGTTCTTCSEEEEEE
T ss_pred C-Ch--hhcCCCCCCEEEccC
Confidence 4 56 357789999999974
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.68 E-value=2.5e-16 Score=151.20 Aligned_cols=126 Identities=29% Similarity=0.415 Sum_probs=67.1
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|++|++++|.++. ++ .+..+++|++|+|++|++++..| ++++++|++|++++|.+.. +| .+..+++|+.|+
T Consensus 39 l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~ 112 (199)
T d2omxa2 39 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLT 112 (199)
T ss_dssp HTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred hcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-cccccccccccc
Confidence 5566666666666653 22 35556666666666666654322 5566666666666665542 22 255555555555
Q ss_pred cccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcc
Q 035786 197 LASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISG 252 (693)
Q Consensus 197 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 252 (693)
+++|.+... ..+..+++|+.|++++|++.. + +.+..+++|++|++++|++++
T Consensus 113 l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~ 164 (199)
T d2omxa2 113 LFNNQITDI--DPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTD 164 (199)
T ss_dssp CCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCC
T ss_pred ccccccccc--cccchhhhhHHhhhhhhhhcc-c-ccccccccccccccccccccC
Confidence 555555432 224455555555555555542 2 234455555555555555543
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.67 E-value=6.6e-15 Score=153.16 Aligned_cols=260 Identities=22% Similarity=0.215 Sum_probs=162.7
Q ss_pred CCEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCC
Q 035786 62 GQVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNL 141 (693)
Q Consensus 62 ~~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l 141 (693)
.+++.++|++... .++|. .+.+|+.|++++|.+. .++. -.+.|++|+|++|.+. .+|. ++++
T Consensus 58 ~~L~~L~Ls~N~l---~~lp~--------~~~~L~~L~l~~n~l~-~l~~----lp~~L~~L~L~~n~l~-~lp~-~~~l 119 (353)
T d1jl5a_ 58 PHLESLVASCNSL---TELPE--------LPQSLKSLLVDNNNLK-ALSD----LPPLLEYLGVSNNQLE-KLPE-LQNS 119 (353)
T ss_dssp TTCSEEECCSSCC---SSCCC--------CCTTCCEEECCSSCCS-CCCS----CCTTCCEEECCSSCCS-SCCC-CTTC
T ss_pred CCCCEEECCCCCC---ccccc--------chhhhhhhhhhhcccc-hhhh----hccccccccccccccc-cccc-hhhh
Confidence 4688999987543 24433 2357889999998876 4442 1346999999999998 4564 6899
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCC-----------------
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTG----------------- 204 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g----------------- 204 (693)
++|+.|++++|.+....+ . ...+..+.+..+.... +..+..++.++.|++++|.+..
T Consensus 120 ~~L~~L~l~~~~~~~~~~-~---~~~l~~l~~~~~~~~~--~~~l~~l~~l~~L~l~~n~~~~~~~~~~~~~~l~~~~~~ 193 (353)
T d1jl5a_ 120 SFLKIIDVDNNSLKKLPD-L---PPSLEFIAAGNNQLEE--LPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNI 193 (353)
T ss_dssp TTCCEEECCSSCCSCCCC-C---CTTCCEEECCSSCCSS--CCCCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSC
T ss_pred ccceeecccccccccccc-c---cccccchhhccccccc--cccccccccceeccccccccccccccccccccccccccc
Confidence 999999999998874322 1 2334445544443321 2233444455555554443321
Q ss_pred --cCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcccccccccccccccc--C--
Q 035786 205 --QIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQ--L-- 278 (693)
Q Consensus 205 --~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--i-- 278 (693)
.+| .+..++.|+.+++++|.... +|. ...++..+.+..|.+... +... .++...++..|.+.+. +
T Consensus 194 ~~~~~-~~~~l~~L~~l~l~~n~~~~-~~~---~~~~l~~~~~~~~~~~~~-~~~~---~~l~~~~~~~~~~~~l~~l~~ 264 (353)
T d1jl5a_ 194 LEELP-ELQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTDL-PELP---QSLTFLDVSENIFSGLSELPP 264 (353)
T ss_dssp CSSCC-CCTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSCC-CCCC---TTCCEEECCSSCCSEESCCCT
T ss_pred ccccc-cccccccccccccccccccc-ccc---cccccccccccccccccc-cccc---ccccccccccccccccccccc
Confidence 222 34667889999999887763 443 335577777887777642 2211 1222222222221110 0
Q ss_pred -----------CCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCCccCcCCCCCCcEEEccCCc
Q 035786 279 -----------SEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWPILSTNGNASGAVFNISNNM 347 (693)
Q Consensus 279 -----------~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~l~ls~N~ 347 (693)
-..+...+++|++|++++|+++ .+|.. +++|+.|+|++|+|+ .+|. .+.+|+.|++++|+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~----~~~~L~~L~L~~N~ 335 (353)
T d1jl5a_ 265 NLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPE----LPQNLKQLHVEYNP 335 (353)
T ss_dssp TCCEEECCSSCCSEECCCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSC
T ss_pred hhcccccccCccccccccCCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCC-cccc----ccCCCCEEECcCCc
Confidence 0112234578999999999998 56653 578999999999998 6774 34679999999999
Q ss_pred cceecCCCCCCCCCEEEc
Q 035786 348 LYGDLNSSSFRKFSLIDL 365 (693)
Q Consensus 348 l~g~~~~~~~~~l~~ldL 365 (693)
++ .+|. ....|+.|.+
T Consensus 336 L~-~lp~-~~~~L~~L~~ 351 (353)
T d1jl5a_ 336 LR-EFPD-IPESVEDLRM 351 (353)
T ss_dssp CS-SCCC-CCTTCCEEEC
T ss_pred CC-CCCc-cccccCeeEC
Confidence 87 4553 2235665554
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.67 E-value=2.6e-16 Score=151.15 Aligned_cols=180 Identities=26% Similarity=0.360 Sum_probs=110.0
Q ss_pred ccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccc
Q 035786 120 LQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199 (693)
Q Consensus 120 L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 199 (693)
+..+.++.+.+++.++ ...+.+|++|++++|.++. ++ .+..+++|++|++++|++++..| +..+++|++|++++
T Consensus 20 ~i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~ 93 (199)
T d2omxa2 20 KMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNN 93 (199)
T ss_dssp HHHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccCccc--ccCCcccccccccc
Confidence 3344566666665443 2356677778888777763 32 36677777777777777775432 67777777777777
Q ss_pred ccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCccccccccccccccccCC
Q 035786 200 NFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRNLAKLVISENGLEGQLS 279 (693)
Q Consensus 200 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i~ 279 (693)
|.+.. +| .+.++++|+.|++++|.+... ..+..+++|+.|++++|++.. ++ .+..+++|+.|++++|++++. +
T Consensus 94 n~~~~-~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~~-~l~~~~~L~~L~l~~n~l~~l-~ 166 (199)
T d2omxa2 94 NQIAD-IT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLNFSSNQVTDL-K 166 (199)
T ss_dssp SCCCC-CG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC-G
T ss_pred ccccc-cc-ccccccccccccccccccccc--cccchhhhhHHhhhhhhhhcc-cc-cccccccccccccccccccCC-c
Confidence 77653 33 366777777777777766542 236667777777777777653 22 355666666666666666532 2
Q ss_pred CcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEE
Q 035786 280 EGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFL 316 (693)
Q Consensus 280 ~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L 316 (693)
. +..+++|+.|++++|+++. +| .+..+++|+.|
T Consensus 167 ~--l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 167 P--LANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp G--GTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred c--ccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 1 3555666666666666654 22 34455555543
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=5.5e-17 Score=175.35 Aligned_cols=304 Identities=20% Similarity=0.182 Sum_probs=187.4
Q ss_pred CEeEEEcCCCCcccccccCCccCccccccCCCCCEEEccCCCCCC----cCchHhhhCCCCccEEEecCCCCCcC----C
Q 035786 63 QVIAINISGFKRTRIGRLNPRFAVDSLGNLTLLSSFNASGLSLPG----SIPEWFGYRLPALQVLDLRSCSLSGS----I 134 (693)
Q Consensus 63 ~v~~l~l~~~~~~~~g~~~~~~~~~~l~~L~~L~~L~ls~~~l~g----~ip~~~~~~l~~L~~L~Ls~n~l~g~----~ 134 (693)
.+..||+++...+..+ -.+-+..+++++.|++++|.++- .|+..+. .+++|++|||++|.++.. +
T Consensus 3 ~l~~ld~~~~~i~~~~------~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~-~~~~L~~LdLs~N~i~~~~~~~l 75 (460)
T d1z7xw1 3 DIQSLDIQCEELSDAR------WAELLPLLQQCQVVRLDDCGLTEARCKDISSALR-VNPALAELNLRSNELGDVGVHCV 75 (460)
T ss_dssp EEEEEEEESCCCCHHH------HHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHH-TCTTCCEEECTTCCCHHHHHHHH
T ss_pred CCCEEEeeCCcCChHH------HHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHh-cCCCCCEEECcCCcCChHHHHHH
Confidence 3677888765432111 01124567888999999998762 3444454 489999999999988532 2
Q ss_pred CcccC-CCccCCEEecccCcCCcc----CccccCCCCCCCEEEccCCCCCCcCc--------------------------
Q 035786 135 PGSFG-NLSRLNVLYLSGNSLAGN----VPATLGELKKLSNLDLSRNLLTGEIP-------------------------- 183 (693)
Q Consensus 135 p~~~~-~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p-------------------------- 183 (693)
...+. ..++|++|+|++|.++.. ++..+..+++|++|+|++|.++..-.
T Consensus 76 ~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 155 (460)
T d1z7xw1 76 LQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSA 155 (460)
T ss_dssp HHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG
T ss_pred HHHHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccch
Confidence 33333 335799999999998753 45677889999999999998753100
Q ss_pred -------hhhhcCcCCCeeecccccCCCc---------------------------------CcccccCCCCCCEEEccC
Q 035786 184 -------NAISLLGNLTRLNLASNFFTGQ---------------------------------IPSGLYSLSSIQFLNLSD 223 (693)
Q Consensus 184 -------~~~~~l~~L~~L~Ls~N~l~g~---------------------------------~p~~~~~l~~L~~L~Ls~ 223 (693)
..+.....++.++++.+..... ....+...+.++.+++++
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~ 235 (460)
T d1z7xw1 156 ASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 235 (460)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCS
T ss_pred hhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhh
Confidence 0112234455555554432100 001122345677777777
Q ss_pred Ccccc-----cCCccccCCCCCCEEEccCCcCccc----CchhhhcCccccccccccccccccC----CCcccCCCCCCC
Q 035786 224 NALTG-----FIPSEVGNLDKLIELDLSKNSISGS----LPLELRGLRNLAKLVISENGLEGQL----SEGLFPTLDQLQ 290 (693)
Q Consensus 224 N~l~g-----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~i----~~~~~~~l~~L~ 290 (693)
|.+.. .++........++.|++++|.+... ....+...+.++.+++++|.++... ...+......|+
T Consensus 236 n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~ 315 (460)
T d1z7xw1 236 NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLE 315 (460)
T ss_dssp SBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCC
T ss_pred ccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhccccccccccc
Confidence 76532 1223344556788888888877643 2334566778888888888775321 111223345788
Q ss_pred EEEccCCcCCCcCcc----cccCCCCCCEEEccCCcCccc----CCccCcCCCCCCcEEEccCCcccee----cCC--CC
Q 035786 291 VVDLSGNKLDGALPA----TLFLRPNLRFLDLSRNNITGS----WPILSTNGNASGAVFNISNNMLYGD----LNS--SS 356 (693)
Q Consensus 291 ~L~Ls~N~l~g~~p~----~l~~~~~L~~L~Ls~N~l~g~----~p~~~~~~~~~l~~l~ls~N~l~g~----~~~--~~ 356 (693)
.+++++|.++..... .+...++|++|+|++|+|++. ++.........|+.|+|++|.++.. +.. ..
T Consensus 316 ~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~ 395 (460)
T d1z7xw1 316 SLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLA 395 (460)
T ss_dssp EEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHH
T ss_pred cccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhc
Confidence 888888888754322 234456788888888888642 2222223456688888888888642 211 23
Q ss_pred CCCCCEEEccCCcceee
Q 035786 357 FRKFSLIDLSSNYFQGT 373 (693)
Q Consensus 357 ~~~l~~ldLs~N~l~g~ 373 (693)
.++|+.|||++|+++.+
T Consensus 396 ~~~L~~L~Ls~N~i~~~ 412 (460)
T d1z7xw1 396 NHSLRELDLSNNCLGDA 412 (460)
T ss_dssp CCCCCEEECCSSSCCHH
T ss_pred CCCCCEEECCCCcCCHH
Confidence 46788888888888653
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=1.6e-15 Score=163.52 Aligned_cols=287 Identities=21% Similarity=0.185 Sum_probs=191.7
Q ss_pred ccccCCCCCEEEccCCCCCCc----CchHhhhCCCCccEEEecCCCCCcC----CCcccCCCccCCEEecccCcCCccC-
Q 035786 88 SLGNLTLLSSFNASGLSLPGS----IPEWFGYRLPALQVLDLRSCSLSGS----IPGSFGNLSRLNVLYLSGNSLAGNV- 158 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~----ip~~~~~~l~~L~~L~Ls~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~~- 158 (693)
.+..++.|+.||+++|.+... +...+....++|++|+|++|.++.. ++..+..+++|++|+|++|.+...-
T Consensus 50 ~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~ 129 (460)
T d1z7xw1 50 ALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGL 129 (460)
T ss_dssp HHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHH
T ss_pred HHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhh
Confidence 457889999999999987521 2222222235799999999999754 4667889999999999999875310
Q ss_pred ---c-----------------------------cccCCCCCCCEEEccCCCCCC--------------------------
Q 035786 159 ---P-----------------------------ATLGELKKLSNLDLSRNLLTG-------------------------- 180 (693)
Q Consensus 159 ---p-----------------------------~~~~~l~~L~~L~Ls~N~l~~-------------------------- 180 (693)
. ..+.....++.++++.+....
T Consensus 130 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 209 (460)
T d1z7xw1 130 QLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCG 209 (460)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSC
T ss_pred hhhhhcccccccccccccccccccchhhhccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0 001223456666666554321
Q ss_pred ---c----CchhhhcCcCCCeeecccccCCC-----cCcccccCCCCCCEEEccCCccccc----CCccccCCCCCCEEE
Q 035786 181 ---E----IPNAISLLGNLTRLNLASNFFTG-----QIPSGLYSLSSIQFLNLSDNALTGF----IPSEVGNLDKLIELD 244 (693)
Q Consensus 181 ---~----~p~~~~~l~~L~~L~Ls~N~l~g-----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~ 244 (693)
. ....+.....++.+++++|.+.. .++........++.|++++|.+... ....+...+.++.++
T Consensus 210 ~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~ 289 (460)
T d1z7xw1 210 VTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELS 289 (460)
T ss_dssp CBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEE
T ss_pred ccchhhhcccccccccccccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccc
Confidence 0 01123456778889988887642 2233445678899999999988643 223355678899999
Q ss_pred ccCCcCcccCchhh-----hcCccccccccccccccccCCCc---ccCCCCCCCEEEccCCcCCCc----Cccccc-CCC
Q 035786 245 LSKNSISGSLPLEL-----RGLRNLAKLVISENGLEGQLSEG---LFPTLDQLQVVDLSGNKLDGA----LPATLF-LRP 311 (693)
Q Consensus 245 Ls~N~l~g~~p~~~-----~~l~~L~~L~Ls~N~l~g~i~~~---~~~~l~~L~~L~Ls~N~l~g~----~p~~l~-~~~ 311 (693)
+++|.++......+ .....|+.+++++|.++..-... .+...++|++|+|++|+++.. ++..+. ..+
T Consensus 290 l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~ 369 (460)
T d1z7xw1 290 LAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGS 369 (460)
T ss_dssp CTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred cccccccccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccC
Confidence 99999875333222 23457999999999886432111 223456899999999999753 344443 457
Q ss_pred CCCEEEccCCcCccc----CCccCcCCCCCCcEEEccCCccceecCC-------CCCCCCCEEEccCCcceeecC
Q 035786 312 NLRFLDLSRNNITGS----WPILSTNGNASGAVFNISNNMLYGDLNS-------SSFRKFSLIDLSSNYFQGTVA 375 (693)
Q Consensus 312 ~L~~L~Ls~N~l~g~----~p~~~~~~~~~l~~l~ls~N~l~g~~~~-------~~~~~l~~ldLs~N~l~g~ip 375 (693)
.|++|+|++|+|+.. ++. .+..++.|+.|++++|+++..... .....|+.|++++|.+.....
T Consensus 370 ~L~~L~Ls~n~i~~~~~~~l~~-~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~~~~ 443 (460)
T d1z7xw1 370 VLRVLWLADCDVSDSSCSSLAA-TLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEME 443 (460)
T ss_dssp CCCEEECTTSCCCHHHHHHHHH-HHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHH
T ss_pred CCCEEECCCCCCChHHHHHHHH-HHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCHHHH
Confidence 899999999999742 221 223457899999999998642110 233479999999999976544
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=2.6e-14 Score=131.93 Aligned_cols=106 Identities=23% Similarity=0.247 Sum_probs=52.2
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
...|++|||++|+|+. +|..+..+++|+.|+|++|.++. ++ .+..+++|++|++++|.++...+..+..+++|+.|+
T Consensus 17 ~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 17 AVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 93 (162)
T ss_dssp TTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCccccccccccccce
Confidence 4455566666666553 34444555555666666555552 22 355555555555555555543333344455555555
Q ss_pred cccccCCCcCc--ccccCCCCCCEEEccCCcc
Q 035786 197 LASNFFTGQIP--SGLYSLSSIQFLNLSDNAL 226 (693)
Q Consensus 197 Ls~N~l~g~~p--~~~~~l~~L~~L~Ls~N~l 226 (693)
+++|+++. ++ ..+..+++|+.|++++|.+
T Consensus 94 L~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i 124 (162)
T d1a9na_ 94 LTNNSLVE-LGDLDPLASLKSLTYLCILRNPV 124 (162)
T ss_dssp CCSCCCCC-GGGGGGGGGCTTCCEEECCSSGG
T ss_pred eccccccc-cccccccccccccchhhcCCCcc
Confidence 55555542 11 1233444444444444444
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.47 E-value=1.1e-13 Score=121.45 Aligned_cols=87 Identities=30% Similarity=0.390 Sum_probs=37.7
Q ss_pred cCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccC-CccccCCCCC
Q 035786 162 LGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFI-PSEVGNLDKL 240 (693)
Q Consensus 162 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L 240 (693)
+..+++|++||+++|.++ .+|..+..+++|+.|++++|.+++ +| .+..+++|+.|++++|+++... ...++.+++|
T Consensus 16 l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L 92 (124)
T d1dcea3 16 LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRL 92 (124)
T ss_dssp GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTC
T ss_pred cccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCCccCCCCCchhhcCCCCC
Confidence 344444444444444443 233344444444444444444432 22 2444444444444444444321 1234444455
Q ss_pred CEEEccCCcCc
Q 035786 241 IELDLSKNSIS 251 (693)
Q Consensus 241 ~~L~Ls~N~l~ 251 (693)
+.|++++|.++
T Consensus 93 ~~L~l~~N~i~ 103 (124)
T d1dcea3 93 VLLNLQGNSLC 103 (124)
T ss_dssp CEEECTTSGGG
T ss_pred CEEECCCCcCC
Confidence 55555555443
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=8.7e-15 Score=148.46 Aligned_cols=207 Identities=24% Similarity=0.242 Sum_probs=88.6
Q ss_pred CCccEEEecCCCCCcC-CCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCC-CCCCc-CchhhhcCcCCCe
Q 035786 118 PALQVLDLRSCSLSGS-IPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRN-LLTGE-IPNAISLLGNLTR 194 (693)
Q Consensus 118 ~~L~~L~Ls~n~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~ 194 (693)
.+|++|||++|.+++. ++..+.++++|++|+|+++.+++..+..++.+++|++|+++++ .++.. +......+++|++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~ 125 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence 3455555555544332 2223444555555555555554444444555555555555543 23311 1122234455555
Q ss_pred eecccc-cCCCc-Cccccc-CCCCCCEEEccCCc--cccc-CCccccCCCCCCEEEccCC-cCcccCchhhhcCcccccc
Q 035786 195 LNLASN-FFTGQ-IPSGLY-SLSSIQFLNLSDNA--LTGF-IPSEVGNLDKLIELDLSKN-SISGSLPLELRGLRNLAKL 267 (693)
Q Consensus 195 L~Ls~N-~l~g~-~p~~~~-~l~~L~~L~Ls~N~--l~g~-~p~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L 267 (693)
|+++++ .++.. ++..+. ..++|+.|+++++. ++.. +...+.++++|++|++++| .+++.....+.++++|++|
T Consensus 126 L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L 205 (284)
T d2astb2 126 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHL 205 (284)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred cccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEE
Confidence 555543 22211 111111 22445555555431 2211 1112234455555555553 3444444555555555555
Q ss_pred ccccc-cccccCCCcccCCCCCCCEEEccCCcCCCcCcccccCCCCCCEEEccCCcCcccCC
Q 035786 268 VISEN-GLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPATLFLRPNLRFLDLSRNNITGSWP 328 (693)
Q Consensus 268 ~Ls~N-~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~~~~L~~L~Ls~N~l~g~~p 328 (693)
+++++ .+++..... +..+++|+.|+++++--.+.++.....+|+| ++..+++++..+
T Consensus 206 ~L~~C~~i~~~~l~~-L~~~~~L~~L~l~~~~~d~~l~~l~~~lp~L---~i~~~~ls~~~~ 263 (284)
T d2astb2 206 SLSRCYDIIPETLLE-LGEIPTLKTLQVFGIVPDGTLQLLKEALPHL---QINCSHFTTIAR 263 (284)
T ss_dssp ECTTCTTCCGGGGGG-GGGCTTCCEEECTTSSCTTCHHHHHHHSTTS---EESCCCSCCTTC
T ss_pred ECCCCCCCChHHHHH-HhcCCCCCEEeeeCCCCHHHHHHHHHhCccc---cccCccCCCCCC
Confidence 55552 343322222 2445566666666652222222222233443 345556654433
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=5.6e-14 Score=129.71 Aligned_cols=128 Identities=19% Similarity=0.197 Sum_probs=80.8
Q ss_pred cCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCC
Q 035786 138 FGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQ 217 (693)
Q Consensus 138 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 217 (693)
|.++.+|++|+|++|+++. +|..+..+++|++|||++|.++ .++ .+..+++|++|++++|.++...+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccc
Confidence 4566667777777777763 3555566677777777777776 333 366677777777777777654444445677777
Q ss_pred EEEccCCcccccCC-ccccCCCCCCEEEccCCcCcccC---chhhhcCccccccc
Q 035786 218 FLNLSDNALTGFIP-SEVGNLDKLIELDLSKNSISGSL---PLELRGLRNLAKLV 268 (693)
Q Consensus 218 ~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~---p~~~~~l~~L~~L~ 268 (693)
.|++++|+++.... ..+..+++|++|++++|.++... +..+..+++|++||
T Consensus 91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred cceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 77777777664211 34666677777777777765332 22456677777666
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.45 E-value=1.4e-13 Score=120.93 Aligned_cols=103 Identities=31% Similarity=0.345 Sum_probs=78.9
Q ss_pred CEEEccCCCCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCC
Q 035786 169 SNLDLSRNLLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKN 248 (693)
Q Consensus 169 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 248 (693)
++|||++|+++ .+| .+..+++|++|++++|.++ .+|+.++.+++|+.|++++|+++. +| .++.+++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 57888888887 444 4788888888888888887 567778888888888888888875 34 4788888888888888
Q ss_pred cCcccC-chhhhcCccccccccccccccc
Q 035786 249 SISGSL-PLELRGLRNLAKLVISENGLEG 276 (693)
Q Consensus 249 ~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g 276 (693)
+++... ...+..+++|+.|++++|.++.
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 887543 2456777777777777777653
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.44 E-value=8.8e-15 Score=152.70 Aligned_cols=40 Identities=25% Similarity=0.188 Sum_probs=19.4
Q ss_pred CCCCCCCEEEccCCCCCCc----CchhhhcCcCCCeeecccccC
Q 035786 163 GELKKLSNLDLSRNLLTGE----IPNAISLLGNLTRLNLASNFF 202 (693)
Q Consensus 163 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l 202 (693)
...++|++|+|++|.++.. +...+...++|++|++++|.+
T Consensus 90 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l 133 (344)
T d2ca6a1 90 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGL 133 (344)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCC
T ss_pred hhCCCcccccccccccccccccchhhhhcccccchheecccccc
Confidence 3445555555555555432 222333445555555555544
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.43 E-value=8.8e-15 Score=152.69 Aligned_cols=237 Identities=18% Similarity=0.197 Sum_probs=143.3
Q ss_pred ccccCCCCCEEEccCCCCCCcCchHhh---hCCCCccEEEecCCCCCcC----------CCcccCCCccCCEEecccCcC
Q 035786 88 SLGNLTLLSSFNASGLSLPGSIPEWFG---YRLPALQVLDLRSCSLSGS----------IPGSFGNLSRLNVLYLSGNSL 154 (693)
Q Consensus 88 ~l~~L~~L~~L~ls~~~l~g~ip~~~~---~~l~~L~~L~Ls~n~l~g~----------~p~~~~~l~~L~~L~Ls~N~l 154 (693)
.+.+.+.|+.|++++|.+...-...++ ...++|+.|+++++..... +...+..+++|+.|+|++|.+
T Consensus 26 ~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i 105 (344)
T d2ca6a1 26 VLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAF 105 (344)
T ss_dssp HHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCC
T ss_pred HHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccc
Confidence 566778899999999876543222222 2378999999998765322 123356778999999999998
Q ss_pred Ccc----CccccCCCCCCCEEEccCCCCCCcCchh-------------hhcCcCCCeeecccccCCCc----CcccccCC
Q 035786 155 AGN----VPATLGELKKLSNLDLSRNLLTGEIPNA-------------ISLLGNLTRLNLASNFFTGQ----IPSGLYSL 213 (693)
Q Consensus 155 ~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-------------~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l 213 (693)
... +...+...++|++|++++|.+...-... ....+.|+.|++++|.++.. +...+...
T Consensus 106 ~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~ 185 (344)
T d2ca6a1 106 GPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 185 (344)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHC
T ss_pred ccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhh
Confidence 754 3344567889999999999875321111 12356777888888776532 22334456
Q ss_pred CCCCEEEccCCccccc-----CCccccCCCCCCEEEccCCcCccc----CchhhhcCccccccccccccccccCCCcc--
Q 035786 214 SSIQFLNLSDNALTGF-----IPSEVGNLDKLIELDLSKNSISGS----LPLELRGLRNLAKLVISENGLEGQLSEGL-- 282 (693)
Q Consensus 214 ~~L~~L~Ls~N~l~g~-----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~i~~~~-- 282 (693)
++|+.|+|++|+++.. +...+..+++|+.|+|++|.++.. +...+..+++|++|+|++|.+++.-...+
T Consensus 186 ~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~ 265 (344)
T d2ca6a1 186 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 265 (344)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred hhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHH
Confidence 7788888888776531 233455667777777777776532 23445566666677777666653211000
Q ss_pred -c--CCCCCCCEEEccCCcCCCc----Cccccc-CCCCCCEEEccCCcCc
Q 035786 283 -F--PTLDQLQVVDLSGNKLDGA----LPATLF-LRPNLRFLDLSRNNIT 324 (693)
Q Consensus 283 -~--~~l~~L~~L~Ls~N~l~g~----~p~~l~-~~~~L~~L~Ls~N~l~ 324 (693)
+ .....|+.|++++|+++.. +...+. +.++|+.|+|++|++.
T Consensus 266 ~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 266 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred HhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCC
Confidence 0 1123466666666665432 122221 3455666666666654
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=4.6e-14 Score=143.02 Aligned_cols=221 Identities=23% Similarity=0.214 Sum_probs=131.3
Q ss_pred EEEccCCCCCCcCchHhhhCCCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCcc-CccccCCCCCCCEEEccC
Q 035786 97 SFNASGLSLPGSIPEWFGYRLPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGN-VPATLGELKKLSNLDLSR 175 (693)
Q Consensus 97 ~L~ls~~~l~g~ip~~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~ 175 (693)
.+|++++.+...+...+.. ..+..+.++...+...+. ......+|++|||+++.++.. ++..+..+++|++|+|++
T Consensus 4 ~lDLs~~~l~~~~l~~l~~--~~~~~lrl~~~~~~~~~~-~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~ 80 (284)
T d2astb2 4 TLDLTGKNLHPDVTGRLLS--QGVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 80 (284)
T ss_dssp EEECTTCBCCHHHHHHHHH--TTCSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred EEECCCCCCCchHHHHHHh--ccceEeeccccccccchh-hhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence 6777777665444443332 235566666655543332 234556889999998887644 345577888999999999
Q ss_pred CCCCCcCchhhhcCcCCCeeecccc-cCCCc-CcccccCCCCCCEEEccCC-ccccc-CCccccC-CCCCCEEEccCC--
Q 035786 176 NLLTGEIPNAISLLGNLTRLNLASN-FFTGQ-IPSGLYSLSSIQFLNLSDN-ALTGF-IPSEVGN-LDKLIELDLSKN-- 248 (693)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~-l~~L~~L~Ls~N-- 248 (693)
|.+++..+..+..+++|++|+++++ .++.. +......+++|++|+++++ .++.. ++..+.. .++|+.|+++++
T Consensus 81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 160 (284)
T d2astb2 81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK 160 (284)
T ss_dssp CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG
T ss_pred cCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccc
Confidence 8888777788888888999998885 45421 2222356788888888875 33321 1112222 356778877754
Q ss_pred cCccc-CchhhhcCccccccccccc-cccccCCCcccCCCCCCCEEEccC-CcCCCcCcccccCCCCCCEEEccCC
Q 035786 249 SISGS-LPLELRGLRNLAKLVISEN-GLEGQLSEGLFPTLDQLQVVDLSG-NKLDGALPATLFLRPNLRFLDLSRN 321 (693)
Q Consensus 249 ~l~g~-~p~~~~~l~~L~~L~Ls~N-~l~g~i~~~~~~~l~~L~~L~Ls~-N~l~g~~p~~l~~~~~L~~L~Ls~N 321 (693)
.++.. +.....++++|++|++++| .+++.....+ ..+++|++|++++ +.+++.....+..+++|+.|+++++
T Consensus 161 ~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l-~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 161 NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF-FQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGG-GGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred ccccccccccccccccccccccccccCCCchhhhhh-cccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 23321 2223345666666666654 3443333322 4455666666666 3455444445555566666666554
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.28 E-value=3.4e-14 Score=135.80 Aligned_cols=105 Identities=26% Similarity=0.288 Sum_probs=45.0
Q ss_pred CCCccEEEecCCCCCcCCCcccCCCccCCEEecccCcCCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeee
Q 035786 117 LPALQVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLN 196 (693)
Q Consensus 117 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 196 (693)
+++|++|+|++|.++. ++ .|.++++|++|+|++|.++ .+|..+..+++|++|++++|.++. + +.+..+++|+.|+
T Consensus 47 L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~~L~~L~ 121 (198)
T d1m9la_ 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKLVNLRVLY 121 (198)
T ss_dssp TTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHHHHSSEEE
T ss_pred ccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-ccccccccccccc
Confidence 5555555555555442 22 2444455555555555444 233333333344445554444442 1 2244444444444
Q ss_pred cccccCCCcCc-ccccCCCCCCEEEccCCcc
Q 035786 197 LASNFFTGQIP-SGLYSLSSIQFLNLSDNAL 226 (693)
Q Consensus 197 Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l 226 (693)
+++|+++.... ..+..+++|+.|+|++|.+
T Consensus 122 L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l 152 (198)
T d1m9la_ 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSSHH
T ss_pred cccchhccccccccccCCCccceeecCCCcc
Confidence 44444432110 2233444444444444443
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.26 E-value=8.1e-14 Score=133.14 Aligned_cols=129 Identities=28% Similarity=0.306 Sum_probs=56.4
Q ss_pred hhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCcccCchhhhcCcc
Q 035786 184 NAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALTGFIPSEVGNLDKLIELDLSKNSISGSLPLELRGLRN 263 (693)
Q Consensus 184 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 263 (693)
.++..+++|++|+|++|.++ .++ .+..+++|+.|+|++|+++ .+|..+..+++|++|++++|+++.. ..+..+++
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~~ 116 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL--SGIEKLVN 116 (198)
T ss_dssp HHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH--HHHHHHHH
T ss_pred hHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-ccccccccccccccccccccccccc--cccccccc
Confidence 34444444444444444443 222 2444444444444444443 2333233333455555555555431 22444455
Q ss_pred ccccccccccccccCCCcccCCCCCCCEEEccCCcCCCcCcc----------cccCCCCCCEEE
Q 035786 264 LAKLVISENGLEGQLSEGLFPTLDQLQVVDLSGNKLDGALPA----------TLFLRPNLRFLD 317 (693)
Q Consensus 264 L~~L~Ls~N~l~g~i~~~~~~~l~~L~~L~Ls~N~l~g~~p~----------~l~~~~~L~~L~ 317 (693)
|++|++++|+++....-..+..+++|+.|++++|.++...+. .+..+|+|+.||
T Consensus 117 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp SSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred ccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 555555555544211111234455555555555554432221 134456666665
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=1.5e-11 Score=112.35 Aligned_cols=104 Identities=25% Similarity=0.200 Sum_probs=52.6
Q ss_pred cEEEecCCCCCcCCCcccCCCccCCEEecccCc-CCccCccccCCCCCCCEEEccCCCCCCcCchhhhcCcCCCeeeccc
Q 035786 121 QVLDLRSCSLSGSIPGSFGNLSRLNVLYLSGNS-LAGNVPATLGELKKLSNLDLSRNLLTGEIPNAISLLGNLTRLNLAS 199 (693)
Q Consensus 121 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 199 (693)
+.++.+++.+. .+|..+..+++|++|++++|+ ++...++.|.++++|+.|+|++|+|+...|.+|..+++|++|+|++
T Consensus 11 ~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~ 89 (156)
T d2ifga3 11 SGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (156)
T ss_dssp SCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccC
Confidence 34555555544 234455555555666654442 5444444555555566666665555544455555555555555555
Q ss_pred ccCCCcCcccccCCCCCCEEEccCCcc
Q 035786 200 NFFTGQIPSGLYSLSSIQFLNLSDNAL 226 (693)
Q Consensus 200 N~l~g~~p~~~~~l~~L~~L~Ls~N~l 226 (693)
|+++ .+|.......+|+.|+|++|.+
T Consensus 90 N~l~-~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 90 NALE-SLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp SCCS-CCCSTTTCSCCCCEEECCSSCC
T ss_pred CCCc-ccChhhhccccccccccCCCcc
Confidence 5554 2333222223455555555544
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=1.6e-11 Score=112.04 Aligned_cols=108 Identities=22% Similarity=0.153 Sum_probs=68.8
Q ss_pred ccCCEEecccCcCCccCccccCCCCCCCEEEccCC-CCCCcCchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEE
Q 035786 142 SRLNVLYLSGNSLAGNVPATLGELKKLSNLDLSRN-LLTGEIPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLN 220 (693)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 220 (693)
...+.++.+++.+. ..|..+..+++|++|++++| .++..-+..|.++++|+.|+|++|+++...|..|..+++|++|+
T Consensus 8 ~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 8 HGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEE
T ss_pred CCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccccee
Confidence 34456667766665 45666666777777777655 36654455667777777777777777665566667777777777
Q ss_pred ccCCcccccCCccccCCCCCCEEEccCCcCc
Q 035786 221 LSDNALTGFIPSEVGNLDKLIELDLSKNSIS 251 (693)
Q Consensus 221 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 251 (693)
|++|+++...+..|.. .+|+.|+|++|.+.
T Consensus 87 Ls~N~l~~l~~~~~~~-~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 87 LSFNALESLSWKTVQG-LSLQELVLSGNPLH 116 (156)
T ss_dssp CCSSCCSCCCSTTTCS-CCCCEEECCSSCCC
T ss_pred ccCCCCcccChhhhcc-ccccccccCCCccc
Confidence 7777776433333333 35777777777664
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.33 E-value=2.5e-08 Score=91.01 Aligned_cols=69 Identities=23% Similarity=0.196 Sum_probs=34.1
Q ss_pred ccccCCCCCCCEEEccCCCCCCc--CchhhhcCcCCCeeecccccCCCcCcccccCCCCCCEEEccCCccc
Q 035786 159 PATLGELKKLSNLDLSRNLLTGE--IPNAISLLGNLTRLNLASNFFTGQIPSGLYSLSSIQFLNLSDNALT 227 (693)
Q Consensus 159 p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 227 (693)
+..+..+++|++|+|++|+++.. ++..+..+++|+.|+|++|.++..-+-.+....+|+.|++++|.+.
T Consensus 58 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~ 128 (162)
T d1koha1 58 RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128 (162)
T ss_dssp HHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTS
T ss_pred HHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcC
Confidence 33334556666666666666532 2334555566666666666655322111222234555555555544
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.24 E-value=4.6e-08 Score=89.10 Aligned_cols=16 Identities=31% Similarity=0.358 Sum_probs=6.9
Q ss_pred CCCCCCEEEccCCcCc
Q 035786 236 NLDKLIELDLSKNSIS 251 (693)
Q Consensus 236 ~l~~L~~L~Ls~N~l~ 251 (693)
.+++|+.|+|++|.++
T Consensus 89 ~l~~L~~L~Ls~N~i~ 104 (162)
T d1koha1 89 KAPNLKILNLSGNELK 104 (162)
T ss_dssp HSTTCCCCCCTTSCCC
T ss_pred hCCcccccccccCccc
Confidence 3344444444444444
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.96 E-value=2e-05 Score=76.76 Aligned_cols=148 Identities=12% Similarity=-0.007 Sum_probs=91.8
Q ss_pred HHHHHhCCCCccCccccCCeeeEEEEEeCCCcEEEEEEeccccc-CHHHHHHHHHHHhcCC-CCCccceeEEEEcCCCee
Q 035786 506 QLLRATGNFSETNLIKKGHSGDLFKGTLAGGTTVVVKKVSLHSF-KKESYMMELDLFSRVS-HARLVPLLGQCLEHETEK 583 (693)
Q Consensus 506 ~l~~at~~~~~~~~ig~G~~G~Vy~~~~~~g~~vavK~l~~~~~-~~~~f~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~ 583 (693)
++.+.-+.+......+.++-..||+.... +..+.||+...... ...++.+|...+..++ +--+-++++++.. ++..
T Consensus 8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~-~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~-~~~~ 85 (263)
T d1j7la_ 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH-DGWS 85 (263)
T ss_dssp HHHHHHTTSEEEECSCCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEE
T ss_pred HHHHhhhceEEEEcCCCCCCCcEEEEEeC-CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEec-CCce
Confidence 44444455554444333444689998754 55677888754332 2445778888877664 3335566665543 4678
Q ss_pred EEEEccCCCCChhhhhhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCC---------------------------
Q 035786 584 LLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHEC--------------------------- 636 (693)
Q Consensus 584 ~lv~ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~r~~ia~~ia~gl~yLH~~~--------------------------- 636 (693)
++||||+++..+.+..... -. +.+++.++++.++-||...
T Consensus 86 ~lv~~~l~G~~~~~~~~~~----------~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (263)
T d1j7la_ 86 NLLMSEADGVLCSEEYEDE----------QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLAD 152 (263)
T ss_dssp EEEEECCSSEEHHHHTTTC----------SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSC
T ss_pred EEEEEeccccccccccccc----------cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhh
Confidence 9999999998875433210 01 1223444444444444210
Q ss_pred -----------------------------CCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 637 -----------------------------NPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 637 -----------------------------~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
.+.++|+|+.+.||+++++..+-|.||+.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 153 VDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 12278999999999999877777999988765
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.62 E-value=4.8e-05 Score=73.55 Aligned_cols=75 Identities=19% Similarity=0.139 Sum_probs=50.8
Q ss_pred cccCCe-eeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCC--ccceeEEEEcCCCeeEEEEccCCCCChh
Q 035786 520 IKKGHS-GDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHAR--LVPLLGQCLEHETEKLLVYKYMVCGDLA 596 (693)
Q Consensus 520 ig~G~~-G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~n--iv~l~g~~~~~~~~~~lv~ey~~~GsL~ 596 (693)
+..|.. ..||+...++|..+.||.-.... ...+.+|.+.+..+.... +.++++++.+ ++..++||||+++-++.
T Consensus 18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~-~~~~~~v~~~i~G~~~~ 94 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGVPCAAVLDVVTE-AGRDWLLLGEVPGQDLL 94 (255)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-SSCEEEEEECCSSEETT
T ss_pred cCCcccCCeEEEEEeCCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCCCCCceeeeccc-ccceEEEEEeeeccccc
Confidence 344443 57999998888888999764432 334677888777664333 4566666554 45789999999886654
Q ss_pred h
Q 035786 597 S 597 (693)
Q Consensus 597 ~ 597 (693)
+
T Consensus 95 ~ 95 (255)
T d1nd4a_ 95 S 95 (255)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.51 E-value=2.6e-05 Score=70.67 Aligned_cols=63 Identities=19% Similarity=0.256 Sum_probs=26.6
Q ss_pred CCCCCCEEEccCCCCCCc----CchhhhcCcCCCeeecccccCCCc----CcccccCCCCCCEEEccCCcc
Q 035786 164 ELKKLSNLDLSRNLLTGE----IPNAISLLGNLTRLNLASNFFTGQ----IPSGLYSLSSIQFLNLSDNAL 226 (693)
Q Consensus 164 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l 226 (693)
..++|++|+|++|.+... +...+...+.|+.|+|++|.++.. +-..+...++|+.|++++|.+
T Consensus 42 ~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~ 112 (167)
T d1pgva_ 42 NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQ 112 (167)
T ss_dssp TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSS
T ss_pred hCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcC
Confidence 334444444444444321 122233344455555555544421 112233444555555555543
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.49 E-value=2.2e-05 Score=71.17 Aligned_cols=87 Identities=11% Similarity=0.173 Sum_probs=49.6
Q ss_pred CCCccEEEecCC-CCCcC----CCcccCCCccCCEEecccCcCCcc----CccccCCCCCCCEEEccCCCCCCc----Cc
Q 035786 117 LPALQVLDLRSC-SLSGS----IPGSFGNLSRLNVLYLSGNSLAGN----VPATLGELKKLSNLDLSRNLLTGE----IP 183 (693)
Q Consensus 117 l~~L~~L~Ls~n-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p 183 (693)
.+.|+.|+|+++ .++.. +-..+...+.|++|+|++|.+... +...+...+.|++|+|++|.++.. +-
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~ 93 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 93 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHH
Confidence 455666666653 34321 222345556677777777766522 223344556777777777777643 22
Q ss_pred hhhhcCcCCCeeecccccCC
Q 035786 184 NAISLLGNLTRLNLASNFFT 203 (693)
Q Consensus 184 ~~~~~l~~L~~L~Ls~N~l~ 203 (693)
..+...++|++|++++|.+.
T Consensus 94 ~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 94 RSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHTTTTCCCSEEECCCCSSC
T ss_pred HHHHhCCcCCEEECCCCcCC
Confidence 34455567778888777544
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.98 E-value=0.0016 Score=66.90 Aligned_cols=75 Identities=11% Similarity=0.090 Sum_probs=46.5
Q ss_pred CccccCCeeeEEEEEeCC-CcEEEEEEeccc-----c---cCHHHHHHHHHHHhcCC-C--CCccceeEEEEcCCCeeEE
Q 035786 518 NLIKKGHSGDLFKGTLAG-GTTVVVKKVSLH-----S---FKKESYMMELDLFSRVS-H--ARLVPLLGQCLEHETEKLL 585 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~-g~~vavK~l~~~-----~---~~~~~f~~Ei~~l~~l~-H--~niv~l~g~~~~~~~~~~l 585 (693)
+.||.|....||+.+..+ |+.|+||.-... . ...+....|.+.|..+. + ..+.+++++ +. ...++
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~-~~~~l 108 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DT-EMAVT 108 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ET-TTTEE
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cC-CCCEE
Confidence 458999999999998754 678999965321 0 11223456787776652 3 334455543 33 45689
Q ss_pred EEccCCCCCh
Q 035786 586 VYKYMVCGDL 595 (693)
Q Consensus 586 v~ey~~~GsL 595 (693)
||||+++..+
T Consensus 109 vmE~L~~~~~ 118 (392)
T d2pula1 109 VMEDLSHLKI 118 (392)
T ss_dssp EECCCTTSEE
T ss_pred EEeccCCccc
Confidence 9999987543
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.72 E-value=0.0002 Score=64.33 Aligned_cols=11 Identities=27% Similarity=0.495 Sum_probs=5.9
Q ss_pred CCCccEEEecC
Q 035786 117 LPALQVLDLRS 127 (693)
Q Consensus 117 l~~L~~L~Ls~ 127 (693)
.+.|++|+|++
T Consensus 16 ~~~L~~L~L~~ 26 (166)
T d1io0a_ 16 DPDLEEVNLNN 26 (166)
T ss_dssp CTTCCEEECTT
T ss_pred CCCCcEEEcCC
Confidence 45555555554
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.66 E-value=0.00024 Score=63.75 Aligned_cols=110 Identities=16% Similarity=0.215 Sum_probs=49.5
Q ss_pred CCccCCEEeccc-CcCCcc----CccccCCCCCCCEEEccCCCCCCc----CchhhhcCcCCCeeecccccCCCc----C
Q 035786 140 NLSRLNVLYLSG-NSLAGN----VPATLGELKKLSNLDLSRNLLTGE----IPNAISLLGNLTRLNLASNFFTGQ----I 206 (693)
Q Consensus 140 ~l~~L~~L~Ls~-N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~ 206 (693)
+.++|++|+|++ +.++.. +-..+...++|++|+|++|.++.. +-..+...++++.+++++|.++.. +
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l 94 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 94 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHH
Confidence 344555555554 233211 122233455555555555555432 122333445555555555554421 1
Q ss_pred cccccCCCCCCEEEc--cCCcccc----cCCccccCCCCCCEEEccCCc
Q 035786 207 PSGLYSLSSIQFLNL--SDNALTG----FIPSEVGNLDKLIELDLSKNS 249 (693)
Q Consensus 207 p~~~~~l~~L~~L~L--s~N~l~g----~~p~~~~~l~~L~~L~Ls~N~ 249 (693)
-..+...++|+.++| ++|.+.. .+...+...+.|+.|+++.+.
T Consensus 95 ~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 95 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 233344555555433 3444432 122334455666666665554
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.55 E-value=0.0034 Score=62.61 Aligned_cols=140 Identities=11% Similarity=0.107 Sum_probs=78.7
Q ss_pred eEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCc--cceeEE----EEcCCCeeEEEEccCCCCChhh---
Q 035786 527 DLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARL--VPLLGQ----CLEHETEKLLVYKYMVCGDLAS--- 597 (693)
Q Consensus 527 ~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~ni--v~l~g~----~~~~~~~~~lv~ey~~~GsL~~--- 597 (693)
.||+.+.++|+.|++|....+....+++..|.+.+..+....+ +..+.. ....+...+.|++|+++..+..
T Consensus 37 ~vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~~~~ 116 (325)
T d1zyla1 37 RVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNI 116 (325)
T ss_dssp EEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCH
T ss_pred eeEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCCCCH
Confidence 7999999999999999986655556778889888877753332 111110 1112345788999998644321
Q ss_pred -----------hhhccC-CCCCCCCCCCCHHH-------------------HHHHHHHHHHHHhhh----ccCCCCCeEe
Q 035786 598 -----------SLHRVT-DLEDDSLQSLDWIT-------------------RLKIAIGAAEGLSYL----HHECNPPLVH 642 (693)
Q Consensus 598 -----------~l~~~~-~~~~~~~~~l~~~~-------------------r~~ia~~ia~gl~yL----H~~~~p~iiH 642 (693)
-+|... ......+..+++.. +-.+...+.+.++.+ .......+||
T Consensus 117 ~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~liH 196 (325)
T d1zyla1 117 DQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLH 196 (325)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECC
T ss_pred HHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCceeec
Confidence 111110 00000112223221 111111122222222 2223346899
Q ss_pred cCCCCCCeeeCCCCceEECCcccccc
Q 035786 643 RDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 643 rDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
+|+.+.|||++++ ..+.||+.+..
T Consensus 197 gDlh~~NvL~~~~--~~~IDFdd~~~ 220 (325)
T d1zyla1 197 GDCHAGNILWRDG--PMFVDLDDARN 220 (325)
T ss_dssp SSCSGGGEEESSS--EEECCCTTCCE
T ss_pred CCCCcccEEEeCC--ceEEechhccc
Confidence 9999999999754 45889988765
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=93.69 E-value=0.073 Score=53.96 Aligned_cols=72 Identities=22% Similarity=0.212 Sum_probs=45.8
Q ss_pred CccccCCeeeEEEEEeCCC--------cEEEEEEecccccCHHHHHHHHHHHhcCCCCCcc-ceeEEEEcCCCeeEEEEc
Q 035786 518 NLIKKGHSGDLFKGTLAGG--------TTVVVKKVSLHSFKKESYMMELDLFSRVSHARLV-PLLGQCLEHETEKLLVYK 588 (693)
Q Consensus 518 ~~ig~G~~G~Vy~~~~~~g--------~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~~lv~e 588 (693)
+.|+.|-.=.+|+...+++ +.|.++... ......+-.+|.++++.+.-.+++ +++++| . + .+|+|
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~--~-~--g~I~e 121 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPETESHLVAESVIFTLLSERHLGPKLYGIF--S-G--GRLEE 121 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCCHHHHHHHHHHHHHHHHTTSSSCEEEEE--T-T--EEEEC
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-CcchhhHHHHHHHHHHHHHhCCCCCeEEEEc--C-C--ceEEE
Confidence 3467777779999987543 346665544 333333455788888887544554 666554 2 2 58999
Q ss_pred cCCCCCh
Q 035786 589 YMVCGDL 595 (693)
Q Consensus 589 y~~~GsL 595 (693)
|+++-.+
T Consensus 122 fi~g~~l 128 (395)
T d1nw1a_ 122 YIPSRPL 128 (395)
T ss_dssp CCCEEEC
T ss_pred EeccccC
Confidence 9987544
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.97 E-value=0.6 Score=44.99 Aligned_cols=165 Identities=12% Similarity=0.038 Sum_probs=82.0
Q ss_pred cCHHHHHHHhCCCCccCcc-----ccCCeeeEEEEEeCCCcEEEEEEecccccCHHHHHHHHHHHhcCCCCCcc--ceeE
Q 035786 502 FTYEQLLRATGNFSETNLI-----KKGHSGDLFKGTLAGGTTVVVKKVSLHSFKKESYMMELDLFSRVSHARLV--PLLG 574 (693)
Q Consensus 502 ~~~~~l~~at~~~~~~~~i-----g~G~~G~Vy~~~~~~g~~vavK~l~~~~~~~~~f~~Ei~~l~~l~H~niv--~l~g 574 (693)
++-+|+.....+|...++. ..|---..|+.+..+|+ +++|...... ..++...|++++..++...+. ..+.
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~-~~~~l~~~~~~l~~L~~~g~pvp~pi~ 80 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV-EKNDLPFFLGLMQHLAAKGLSCPLPLP 80 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCC-CHHHHHHHHHHHHhhhhccccccccce
Confidence 5667787777777664443 34545678998877664 8888875432 233455567777766433321 1111
Q ss_pred EE-----EcCCCeeEEEEccCCCCChhhh--------------hhccCC-CC-CCCCCCC-CHHH---------------
Q 035786 575 QC-----LEHETEKLLVYKYMVCGDLASS--------------LHRVTD-LE-DDSLQSL-DWIT--------------- 617 (693)
Q Consensus 575 ~~-----~~~~~~~~lv~ey~~~GsL~~~--------------l~~~~~-~~-~~~~~~l-~~~~--------------- 617 (693)
.. ...+.....++.+.++...... +|.... .. ....... .|..
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (316)
T d2ppqa1 81 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 160 (316)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred ecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcch
Confidence 00 0012344566777766443221 110000 00 0000011 1111
Q ss_pred -HHHHHHHHHHHHhhhcc-CCCCCeEecCCCCCCeeeCCCCceEECCcccccc
Q 035786 618 -RLKIAIGAAEGLSYLHH-ECNPPLVHRDVQASSILLDDKFEVRLGSLSELHA 668 (693)
Q Consensus 618 -r~~ia~~ia~gl~yLH~-~~~p~iiHrDlk~~NILld~~~~~ki~Dfgla~~ 668 (693)
....+......+.-.+. ...-++||+|+.+.||+++.+...-|-||+.+..
T Consensus 161 ~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 161 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 213 (316)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence 11111111122222221 2233699999999999999888778999998654
|