Citrus Sinensis ID: 035821


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120------
MISKYCITSSFIFLLFIISSTNGTSPLAPALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVNKCTGRFSNGKTVADFIAEFLGLPYAPPFLSFKPRDKLPLTGLNYASGACGILRDTGHHLVSN
ccHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccEEcccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccccccccccHHHHHHcccccccccccccccccccccccHHHHHHHHHccccccccccccccccccEEcEEEcccccccccccccEEccc
MISKYCITSSFIFLLFIISstngtsplapaLYVLGdslldsgnnNYLQTIIKanyspygedfvnkctgrfsngkTVADFIAEFlglpyappflsfkprdklpltglnyasgacgilrdtghhlvsn
MISKYCITSSFIFLLFIISSTNGTSPLAPALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVNKCTGRFSNGKTVADFIAEFLGLPYAPPFLSFKPRDKLPLTGLNYASGACGILRDTGHHLVSN
MISKYCitssfifllfiisstNGTSPLAPALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVNKCTGRFSNGKTVADFIAEFLGLPYAPPFLSFKPRDKLPLTGLNYASGACGILRDTGHHLVSN
***KYCITSSFIFLLFIISSTNGTSPLAPALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVNKCTGRFSNGKTVADFIAEFLGLPYAPPFLSFKPRDKLPLTGLNYASGACGILRDTG******
***KYCITSSFIFLLFIISSTNGTSPLAPALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVNKCTGRFSNGKTVADFIAEFLGLPYAPPFLSFKPRDKLPLTGLNYASGACGILRDTGHH*V**
MISKYCITSSFIFLLFIISSTNGTSPLAPALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVNKCTGRFSNGKTVADFIAEFLGLPYAPPFLSFKPRDKLPLTGLNYASGACGILRDTGHHLVSN
MISKYCITSSFIFLLFIISSTNGTSPLAPALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVNKCTGRFSNGKTVADFIAEFLGLPYAPPFLSFKPRDKLPLTGLNYASGACGILRDTGHHLVSN
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MISKYCITSSFIFLLFIISSTNGTSPLAPALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVNKCTGRFSNGKTVADFIAEFLGLPYAPPFLSFKPRDKLPLTGLNYASGACGILRDTGHHLVSN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query126 2.2.26 [Sep-21-2011]
Q9SIF5 367 GDSL esterase/lipase At2g yes no 0.841 0.288 0.508 1e-25
Q9FNP2 385 GDSL esterase/lipase At5g no no 0.888 0.290 0.504 9e-25
Q8LFJ9 364 GDSL esterase/lipase 7 OS no no 0.769 0.266 0.581 3e-24
Q9SIF3 322 GDSL esterase/lipase At2g no no 0.730 0.285 0.585 7e-23
O64469 349 GDSL esterase/lipase At2g no no 0.880 0.318 0.456 3e-21
Q9FK75 362 GDSL esterase/lipase At5g no no 0.888 0.309 0.445 9e-21
Q9FVV1 374 GDSL esterase/lipase At1g no no 0.753 0.254 0.505 5e-20
Q9LZC5 354 GDSL esterase/lipase At5g no no 0.714 0.254 0.554 6e-20
Q93YW8 361 GDSL esterase/lipase At4g no no 0.761 0.265 0.515 8e-20
Q9SF78 384 GDSL esterase/lipase At1g no no 0.761 0.25 0.540 2e-19
>sp|Q9SIF5|GDL32_ARATH GDSL esterase/lipase At2g03980 OS=Arabidopsis thaliana GN=At2g03980 PE=2 SV=1 Back     alignment and function desciption
 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/118 (50%), Positives = 77/118 (65%), Gaps = 12/118 (10%)

Query: 18  ISSTNGTSPLA----------PALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFV-NKC 66
           I++ N T PL           PA YV+GDSL+DSGNNN+L T++K+N+ PYG DF   K 
Sbjct: 21  ITTINSTKPLEQETVLFGGNFPAFYVIGDSLVDSGNNNHLTTMVKSNFPPYGSDFEGGKA 80

Query: 67  TGRFSNGKTVADFIAEFLGLPYAPPFLSFKPRDKLPL-TGLNYASGACGILRDTGHHL 123
           TGRFSNGKT+AD+IA + GLP  P +L     +K  + TG+NYAS  CGIL  TG  +
Sbjct: 81  TGRFSNGKTIADYIAIYYGLPLVPAYLGLSQEEKNSISTGINYASAGCGILPQTGRQI 138





Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9FNP2|GDL75_ARATH GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1 Back     alignment and function description
>sp|Q8LFJ9|GLIP7_ARATH GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1 Back     alignment and function description
>sp|Q9SIF3|GDL33_ARATH GDSL esterase/lipase At2g04020 OS=Arabidopsis thaliana GN=At2g04020 PE=2 SV=2 Back     alignment and function description
>sp|O64469|GDL37_ARATH GDSL esterase/lipase At2g19060 OS=Arabidopsis thaliana GN=At2g19060 PE=2 SV=1 Back     alignment and function description
>sp|Q9FK75|GDL82_ARATH GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=1 Back     alignment and function description
>sp|Q9FVV1|GDL28_ARATH GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1 Back     alignment and function description
>sp|Q9LZC5|GDL73_ARATH GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana GN=At5g03820 PE=3 SV=1 Back     alignment and function description
>sp|Q93YW8|GDL65_ARATH GDSL esterase/lipase At4g18970 OS=Arabidopsis thaliana GN=At4g18970 PE=2 SV=1 Back     alignment and function description
>sp|Q9SF78|GDL29_ARATH GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query126
255569980 352 zinc finger protein, putative [Ricinus c 0.873 0.312 0.607 3e-31
356573743 359 PREDICTED: GDSL esterase/lipase 7-like [ 0.936 0.328 0.609 4e-31
255569982 354 zinc finger protein, putative [Ricinus c 0.769 0.274 0.686 5e-30
298204435 359 unnamed protein product [Vitis vinifera] 0.936 0.328 0.572 2e-29
224119252 356 predicted protein [Populus trichocarpa] 0.873 0.308 0.637 3e-29
359488323 366 PREDICTED: GDSL esterase/lipase 7-like [ 0.849 0.292 0.623 4e-29
359488321 359 PREDICTED: LOW QUALITY PROTEIN: GDSL est 0.896 0.314 0.588 1e-28
224120728 349 predicted protein [Populus trichocarpa] 0.857 0.309 0.621 2e-28
225451848 392 PREDICTED: GDSL esterase/lipase 7 [Vitis 0.730 0.234 0.612 2e-25
297814712 366 GDSL-motif lipase/hydrolase family prote 0.817 0.281 0.539 2e-24
>gi|255569980|ref|XP_002525953.1| zinc finger protein, putative [Ricinus communis] gi|223534782|gb|EEF36473.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/112 (60%), Positives = 84/112 (75%), Gaps = 2/112 (1%)

Query: 12  IFLLFIISSTNGTSPLAPALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVNKCTGRFS 71
           + +LF + S    +PLAPAL++ GDSL+D GNNN+L T  +ANY PYG +F    TGRF+
Sbjct: 6   LLVLFQLGSFASGAPLAPALFIFGDSLVDGGNNNFLPTHAQANYKPYGANFAAGTTGRFT 65

Query: 72  NGKTVADFIAEFLGLPYAPPFLSFKPRDKLPLTGLNYASGACGILRDTGHHL 123
           NGKTVADFIAEFLGLPY PP +S K  D +P+TGLNYASG+CGIL +TG   
Sbjct: 66  NGKTVADFIAEFLGLPYVPPSMSAK--DSIPVTGLNYASGSCGILTETGKQF 115




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573743|ref|XP_003555016.1| PREDICTED: GDSL esterase/lipase 7-like [Glycine max] Back     alignment and taxonomy information
>gi|255569982|ref|XP_002525954.1| zinc finger protein, putative [Ricinus communis] gi|223534783|gb|EEF36474.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|298204435|emb|CBI16915.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224119252|ref|XP_002331265.1| predicted protein [Populus trichocarpa] gi|222873690|gb|EEF10821.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359488323|ref|XP_002278423.2| PREDICTED: GDSL esterase/lipase 7-like [Vitis vinifera] gi|298204436|emb|CBI16916.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359488321|ref|XP_003633741.1| PREDICTED: LOW QUALITY PROTEIN: GDSL esterase/lipase 7-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224120728|ref|XP_002330937.1| predicted protein [Populus trichocarpa] gi|222873131|gb|EEF10262.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225451848|ref|XP_002282047.1| PREDICTED: GDSL esterase/lipase 7 [Vitis vinifera] gi|298204437|emb|CBI16917.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297814712|ref|XP_002875239.1| GDSL-motif lipase/hydrolase family protein [Arabidopsis lyrata subsp. lyrata] gi|297321077|gb|EFH51498.1| GDSL-motif lipase/hydrolase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query126
TAIR|locus:2049661 367 AT2G03980 "AT2G03980" [Arabido 0.753 0.258 0.567 3.2e-26
TAIR|locus:2143156 364 GLIP7 "AT5G15720" [Arabidopsis 0.761 0.263 0.587 2.9e-25
TAIR|locus:2159547 385 AT5G08460 "AT5G08460" [Arabido 0.793 0.259 0.544 1.6e-24
TAIR|locus:2049641 322 AT2G04020 "AT2G04020" [Arabido 0.730 0.285 0.585 4.2e-24
TAIR|locus:2059098 349 AT2G19060 [Arabidopsis thalian 0.753 0.272 0.520 5.5e-22
TAIR|locus:2150565 354 AT5G03820 "AT5G03820" [Arabido 0.730 0.259 0.557 1.1e-21
TAIR|locus:2171948 362 AT5G45670 "AT5G45670" [Arabido 0.777 0.270 0.504 2.4e-21
TAIR|locus:2824531 384 AT1G71691 "AT1G71691" [Arabido 0.761 0.25 0.540 4.2e-21
TAIR|locus:2032333 374 AT1G71250 "AT1G71250" [Arabido 0.746 0.251 0.510 1.7e-20
TAIR|locus:2044425 344 AT2G19010 [Arabidopsis thalian 0.746 0.273 0.484 3.5e-20
TAIR|locus:2049661 AT2G03980 "AT2G03980" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 55/97 (56%), Positives = 70/97 (72%)

Query:    29 PALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVN-KCTGRFSNGKTVADFIAEFLGLP 87
             PA YV+GDSL+DSGNNN+L T++K+N+ PYG DF   K TGRFSNGKT+AD+IA + GLP
Sbjct:    42 PAFYVIGDSLVDSGNNNHLTTMVKSNFPPYGSDFEGGKATGRFSNGKTIADYIAIYYGLP 101

Query:    88 YAPPFLSFKPRDKLPL-TGLNYASGACGILRDTGHHL 123
               P +L     +K  + TG+NYAS  CGIL  TG  +
Sbjct:   102 LVPAYLGLSQEEKNSISTGINYASAGCGILPQTGRQI 138




GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
TAIR|locus:2143156 GLIP7 "AT5G15720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159547 AT5G08460 "AT5G08460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2049641 AT2G04020 "AT2G04020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059098 AT2G19060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150565 AT5G03820 "AT5G03820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171948 AT5G45670 "AT5G45670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2824531 AT1G71691 "AT1G71691" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032333 AT1G71250 "AT1G71250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044425 AT2G19010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query126
cd01837 315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 2e-37
PLN03156 351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 4e-21
cd01846 270 cd01846, fatty_acyltransferase_like, Fatty acyltra 6e-08
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
 Score =  128 bits (324), Expect = 2e-37
 Identities = 56/93 (60%), Positives = 67/93 (72%), Gaps = 2/93 (2%)

Query: 29  PALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVNKCTGRFSNGKTVADFIAEFLGLPY 88
           PAL+V GDSL+D+GNNNYL T+ KAN+ PYG DF  + TGRFSNG+ + DFIAE LGLP 
Sbjct: 1   PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGLPL 60

Query: 89  A-PPFLSFKPRDKLPLTGLNYASGACGILRDTG 120
             PP+LS        LTG+N+ASG  GIL  TG
Sbjct: 61  LPPPYLSPNGSSDF-LTGVNFASGGAGILDSTG 92


The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315

>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 126
PLN03156 351 GDSL esterase/lipase; Provisional 99.98
cd01837 315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 99.95
PRK15381 408 pathogenicity island 2 effector protein SseJ; Prov 99.83
cd01847 281 Triacylglycerol_lipase_like Triacylglycerol lipase 99.79
cd01846 270 fatty_acyltransferase_like Fatty acyltransferase-l 99.68
COG3240 370 Phospholipase/lecithinase/hemolysin [Lipid metabol 98.41
PF00657 234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 97.1
PF0717295 GRP: Glycine rich protein family; InterPro: IPR010 84.56
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 81.68
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information
Probab=99.98  E-value=1.2e-32  Score=226.12  Aligned_cols=97  Identities=42%  Similarity=0.683  Sum_probs=85.9

Q ss_pred             CCCCCCeEEEcCCchhccCCCCcchhhhhcCCCCCCCCCCC-CCCcCCCCCcchhhhHHHhcCC-CCCCCCCCCCCCCCC
Q 035821           24 TSPLAPALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVN-KCTGRFSNGKTVADFIAEFLGL-PYAPPFLSFKPRDKL  101 (126)
Q Consensus        24 ~~~~~~~lfvFGDSlsDtGN~~~~~~~~~~~~~PyG~~~~~-~ptgRfsnG~~~~d~la~~lgl-~~~p~yl~~~~~~~~  101 (126)
                      ....+++||+||||++|+||++++.+..+++++|||++||+ +|+|||||||+|+||||+.||+ |.+|||+.+.....+
T Consensus        23 ~~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~  102 (351)
T PLN03156         23 TCAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNISD  102 (351)
T ss_pred             ccCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCchh
Confidence            35669999999999999999877665567899999999986 5999999999999999999999 799999987544567


Q ss_pred             CCCcceeeeecceeccCCC
Q 035821          102 PLTGLNYASGACGILRDTG  120 (126)
Q Consensus       102 ~~~G~NFA~gGA~~~~~~~  120 (126)
                      +.+|+|||+||+++++.+.
T Consensus       103 ~~~GvNFA~agag~~~~~~  121 (351)
T PLN03156        103 FATGVCFASAGTGYDNATS  121 (351)
T ss_pred             hcccceeecCCccccCCCc
Confidence            8999999999999988765



>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query126
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 1e-22
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score = 91.0 bits (225), Expect = 1e-22
 Identities = 18/101 (17%), Positives = 27/101 (26%), Gaps = 3/101 (2%)

Query: 29  PALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVN-KCTGRFSNGKTVADFIAEFLGLP 87
             L V GDSL D+G          +            +       G T    +   LG+ 
Sbjct: 16  STLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQLGIA 75

Query: 88  --YAPPFLSFKPRDKLPLTGLNYASGACGILRDTGHHLVSN 126
                   S     +    G N+A G     +       +N
Sbjct: 76  PGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAAN 116


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query126
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 99.85
2q0q_A 216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 92.44
3dci_A 232 Arylesterase; SGNH_hydrolase SUBF structural genom 88.05
3mil_A 240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 87.9
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=99.85  E-value=1.2e-22  Score=174.58  Aligned_cols=89  Identities=21%  Similarity=0.169  Sum_probs=67.3

Q ss_pred             CCCCCCeEEEcCCchhccCCCCcchhhhh---cCCCCCCCCCCCCCCcCCC-CCcchhhhHHHhcCCC--CCCCCCCCCC
Q 035821           24 TSPLAPALYVLGDSLLDSGNNNYLQTIIK---ANYSPYGEDFVNKCTGRFS-NGKTVADFIAEFLGLP--YAPPFLSFKP   97 (126)
Q Consensus        24 ~~~~~~~lfvFGDSlsDtGN~~~~~~~~~---~~~~PyG~~~~~~ptgRfs-nG~~~~d~la~~lgl~--~~p~yl~~~~   97 (126)
                      .+.+|++||+||||+|||||.........   ....|.|++|+   +|||| |||+|+|||||.||+|  +++||+....
T Consensus        11 ~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~~~g~~~~---~Gr~s~~G~~~~D~ia~~lgl~~~~l~p~~~~~~   87 (632)
T 3kvn_X           11 APSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQ---NGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPVN   87 (632)
T ss_dssp             CCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSCBCSSSCC---TTSSCCBCCCHHHHHHHHTTCCGGGGSBSSCHHH
T ss_pred             CCCCCccEEEEccccccCCCcccccCCcCCccccccCCCCccc---cCcccccCCchHHHHHHHcCCCccccCccccccc
Confidence            45789999999999999999854321111   01112377764   89999 9999999999999998  3777775311


Q ss_pred             CCCCCCCcceeeeeccee
Q 035821           98 RDKLPLTGLNYASGACGI  115 (126)
Q Consensus        98 ~~~~~~~G~NFA~gGA~~  115 (126)
                      .+.++.+|+|||+|||++
T Consensus        88 ~~~~~~~G~NfA~gGa~~  105 (632)
T 3kvn_X           88 AQQGIADGNNWAVGGYRT  105 (632)
T ss_dssp             HHHTCCCCSBCCCTTCCH
T ss_pred             cccccccCceEeeccccc
Confidence            245789999999999996



>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query126
d3bzwa1 248 Uncharacterized protein BT2961 {Bacteroides thetai 96.5
d1esca_ 302 Esterase {Streptomyces scabies [TaxId: 1930]} 92.65
d1k7ca_ 233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 91.54
d3dc7a1 207 Uncharacterized protein Lp3323 {Lactobacillus plan 89.82
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein BT2961
species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.50  E-value=0.00066  Score=45.66  Aligned_cols=52  Identities=23%  Similarity=0.247  Sum_probs=35.9

Q ss_pred             CCCCCCeEEEcCCchhccCCCCcchhhhhcCCCCCCCCCCCCCCcCCCCCcchhhhHHHhcCCCCCCCCCCCCCCCCCCC
Q 035821           24 TSPLAPALYVLGDSLLDSGNNNYLQTIIKANYSPYGEDFVNKCTGRFSNGKTVADFIAEFLGLPYAPPFLSFKPRDKLPL  103 (126)
Q Consensus        24 ~~~~~~~lfvFGDSlsDtGN~~~~~~~~~~~~~PyG~~~~~~ptgRfsnG~~~~d~la~~lgl~~~p~yl~~~~~~~~~~  103 (126)
                      ++..-++|++||||+++-....                         ++...|.++|++.||+..               
T Consensus         4 ~p~~~kkI~~~GDS~T~g~~~~-------------------------~~~~~~~~~l~~~l~~~v---------------   43 (248)
T d3bzwa1           4 HPWQGKKVGYIGDSITDPNCYG-------------------------DNIKKYWDFLKEWLGITP---------------   43 (248)
T ss_dssp             CTTTTCEEEEEESTTTCTTTTG-------------------------GGCCCHHHHHHHHHCCEE---------------
T ss_pred             CCCCCCEEEEEehHHccCCCCC-------------------------CccchHHHHHHHHCCCcE---------------
Confidence            4556789999999999743210                         222458999999998631               


Q ss_pred             Ccceeeeecceecc
Q 035821          104 TGLNYASGACGILR  117 (126)
Q Consensus       104 ~G~NFA~gGA~~~~  117 (126)
                        +|+|++|++..+
T Consensus        44 --~N~g~~G~~~~~   55 (248)
T d3bzwa1          44 --FVYGISGRQWDD   55 (248)
T ss_dssp             --EECCCTTCCGGG
T ss_pred             --EEeEecCCcccc
Confidence              478888877543



>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure