Citrus Sinensis ID: 035835

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
ESIGNPTHSIVHNIDSPLCKMKRPTNLLSRISSDGSDSDTPEKCRSRRRRRIHMRRMRIASVPRLPYSSPHFHLPIPQHWLPTPSSENPMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVVDLRRKAKGRS
cccccccccEEEcccccccccccccccccccccccccccccccccHHHcccccEEEcccccccccccccccccccccccccccccccccccEEEEEEEEccccccccEEEEEccccccccccccccEEEEEEcccccHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEEccEEEEEEccccEEEEEccccccccccccccccccHHHHHHHcccEEEEcccEEEccEEEEEccccccccccccccccccEEEEEcccccEEEEEEcccccccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHcccccccEEEEEEccccccccc
ccccccccHcHHcccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccEEEEEccccccccHHHHHHHccccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEEccEEEEEEcccccEEEEccccEEEcccccccccHHHHHHHHHcccEEEEEcccEEcEEEEEEEccccHccccccEcccccEEEEEccccccEEEEEcccccccccHHHHHHHHHHHHHHccccccccHHHHcccccccHHHHHHHHHHHHHHccccccEEEEEEEccccccccc
esignpthsivhnidsplckmkrptnllsrissdgsdsdtpekCRSRRRRRIHMRRMRiasvprlpyssphfhlpipqhwlptpssenpmpefgciSIQGLAESMDDAVSvkeeffrpdivggrtlHFFSvydghggshvvpLNFQIIDYIYTSTHMHYLYLTDTktkqeneevggaeWEDLVRVAIQKSFKRMDQAALSTcalgcqpesmdlVFLGSAALVALVSGDRvvvancgdsravlcrdgrpvpplpddkpqrpDELERIRAAGGklihqngvRVYGILNMsrslggdnllkrvttsqpeisitereggdeclILASDGIWDVISDDLACRVASAClregsaataprsrysdradQRRHDAAAAILCRLALARGSHDNISVIVVDLRRKAKGRS
esignpthsivhnidsplckmkRPTNLLsrissdgsdsdtpekcrsrrrrrihmrrmriasvprlpysspHFHLPIPQHWLPTPSSENPMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGdsravlcrdgrpvpplpddkpqrpDELERIRaaggklihqngvrVYGILNMSRSLGGDNLLKRVTTSqpeisitereggdECLILASDGIWDVISDDLACRVASAclregsaataprsrysdradQRRHDAAAAILCRLalargshdnisvivvdlrrkakgrs
ESIGNPTHSIVHNIDSPLCKMKRPTNLLSRISSDGSDSDTPEKCrsrrrrrihmrrmriASVPRLPYSSPHFHLPIPQHWLPTPSSENPMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSdradqrrhdaaaailcrlalarGSHDNISVIVVDLRRKAKGRS
**********************************************************************HFHLPIPQHWL***********FGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTK***EEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCR***********************AAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVT*****ISITEREGGDECLILASDGIWDVISDDLACRVASACLR**********************AAAAILCRLALARGSHDNISVIVVDL********
******T*SIVHNI**************************************************************************PMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDT*************WEDLVRVAIQKSFKRMDQAALSTCAL*C**E*MDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGIWDVISDDLACRVASACLREGSA*TA***RYSDRADQRRHDAAAAILCRLALARGSHDNISVIVV***R******
********SIVHNIDSPLCKMKRPTNLLSRI***************RRRRRIHMRRMRIASVPRLPYSSPHFHLPIPQHWLPTPSSENPMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGIWDVISDDLACRVASACLR********************HDAAAAILCRLALARGSHDNISVIVVDLRRKAKGRS
****************************************************************************************PMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQE*****GAEWEDLVRVAIQKSFKRMDQAALST*************FLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVVDLRR******
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ESIGNPTHSIVHNIDSPLCKMKRPTNLLSRISSDGSDSDTPEKCRSRRRRRIHMRRMRIASVPRLPYSSPHFHLPIPQHWLPTPSSENPMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVVDLRRKAKGRS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query400 2.2.26 [Sep-21-2011]
Q9FLI3416 Probable protein phosphat yes no 0.737 0.709 0.425 4e-61
Q0J2L7358 Probable protein phosphat yes no 0.657 0.734 0.444 3e-57
Q9ZW21362 Probable protein phosphat no no 0.692 0.765 0.420 5e-57
Q9LNW3442 Protein phosphatase 2C 3 no no 0.717 0.649 0.364 2e-53
Q65XG6416 Probable protein phosphat no no 0.72 0.692 0.415 3e-52
Q5N9N2414 Probable protein phosphat no no 0.702 0.678 0.4 9e-52
P49597434 Protein phosphatase 2C 56 no no 0.722 0.665 0.409 1e-49
Q5SN75403 Probable protein phosphat no no 0.715 0.709 0.398 2e-49
Q0JLP9467 Probable protein phosphat no no 0.737 0.631 0.403 7e-48
Q65XK7381 Probable protein phosphat no no 0.727 0.763 0.392 1e-47
>sp|Q9FLI3|P2C75_ARATH Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1 Back     alignment and function desciption
 Score =  235 bits (600), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 194/322 (60%), Gaps = 27/322 (8%)

Query: 91  PEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDY 150
           P +G +S+ G +  M+D+V+VK    +P++   R +HFF+VYDGHGGS V  L       
Sbjct: 107 PLYGIVSVMGRSRKMEDSVTVKPNLCKPEVNRQRPVHFFAVYDGHGGSQVSTL------- 159

Query: 151 IYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLV----RVAIQKSFKRMDQAALSTCALG- 205
              ST MH  ++ +   +   EE  G+E  D+V    R  +++SFKRMD+ A STC  G 
Sbjct: 160 --CSTTMHT-FVKEELEQNLEEEEEGSE-NDVVERKWRGVMKRSFKRMDEMATSTCVCGT 215

Query: 206 ----CQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPD 261
               C  +  +    GS A+ A+++ D ++VAN GDSRAVLCR+G  +P   D KP RPD
Sbjct: 216 SVPLCNCDPREAAISGSTAVTAVLTHDHIIVANTGDSRAVLCRNGMAIPLSNDHKPDRPD 275

Query: 262 ELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLIL 321
           E  RI AAGG+++  +G RV GIL  SR++ GD  LK +   +PE++   RE GDECL+L
Sbjct: 276 ERARIEAAGGRVLVVDGARVEGILATSRAI-GDRYLKPMVAWEPEVTFMRRESGDECLVL 334

Query: 322 ASDGIWDVISDDLACRVASACLREGSAATAPRSRYSDRADQ------RRHDAAAAILCRL 375
           ASDG+WDV+S  LAC +A  CLRE + ++   +R +   D        R   AA +L RL
Sbjct: 335 ASDGLWDVLSSQLACDIARFCLREETPSSLDLNRMAQEDDNDGEQNPSRSVLAATLLTRL 394

Query: 376 ALARGSHDNISVIVVDLRRKAK 397
           AL R S DNISV+V+DL+  ++
Sbjct: 395 ALGRQSSDNISVVVIDLKNSSQ 416
Negative regulator of abscisic acid (ABA) responses during seed germination.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q0J2L7|P2C68_ORYSJ Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2 Back     alignment and function description
>sp|Q9ZW21|P2C24_ARATH Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1 Back     alignment and function description
>sp|Q9LNW3|P2C03_ARATH Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1 Back     alignment and function description
>sp|Q65XG6|P2C49_ORYSJ Probable protein phosphatase 2C 49 OS=Oryza sativa subsp. japonica GN=Os05g0457200 PE=2 SV=1 Back     alignment and function description
>sp|Q5N9N2|P2C09_ORYSJ Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1 Back     alignment and function description
>sp|P49597|P2C56_ARATH Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2 Back     alignment and function description
>sp|Q5SN75|P2C08_ORYSJ Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1 Back     alignment and function description
>sp|Q0JLP9|P2C06_ORYSJ Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1 Back     alignment and function description
>sp|Q65XK7|P2C51_ORYSJ Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query400
255539637398 protein phosphatase 2c, putative [Ricinu 0.76 0.763 0.483 2e-71
224122524382 predicted protein [Populus trichocarpa] 0.725 0.759 0.444 1e-63
359490226413 PREDICTED: probable protein phosphatase 0.737 0.714 0.445 9e-60
296084091374 unnamed protein product [Vitis vinifera] 0.737 0.788 0.445 1e-59
224134599364 predicted protein [Populus trichocarpa] 0.717 0.788 0.432 1e-59
15242182416 protein phosphatase [Arabidopsis thalian 0.737 0.709 0.425 3e-59
297792489414 hypothetical protein ARALYDRAFT_495242 [ 0.822 0.794 0.407 7e-59
147805175378 hypothetical protein VITISV_024269 [Viti 0.737 0.780 0.436 6e-58
7768151413 protein phpsphatase 2C (PP2C) [Fagus syl 0.692 0.670 0.434 6e-57
297746002393 unnamed protein product [Vitis vinifera] 0.695 0.707 0.417 7e-57
>gi|255539637|ref|XP_002510883.1| protein phosphatase 2c, putative [Ricinus communis] gi|223549998|gb|EEF51485.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 157/325 (48%), Positives = 202/325 (62%), Gaps = 21/325 (6%)

Query: 91  PEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDY 150
           P FG +S+ G +  M+DAV+V+    +PDI   R +H+F+VYDGHGGSHV  L  + +  
Sbjct: 72  PTFGTMSVAGRSSDMEDAVAVRISLCKPDINNRRPVHYFAVYDGHGGSHVAALCRERMHV 131

Query: 151 IYTSTHMHYLYLTDTKT----------KQENEEVGGAEWEDLVRVAIQKSFKRMDQAALS 200
           +     M   +  + ++          K+     G   WE+  +  + +SFK+MD+AALS
Sbjct: 132 VLEGELMRTDHTDNGESGEGRGKSSSPKEREFREGKYGWEEQWKSVLIRSFKKMDEAALS 191

Query: 201 TCALG-----CQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDD 255
           TCA G     C    M++   GS A+VA+++ + ++VANCGDSRAVLCR GR +P   D 
Sbjct: 192 TCACGSIGFDCGCHPMEVALGGSTAVVAILTPEHIIVANCGDSRAVLCRGGRAIPLSVDH 251

Query: 256 KPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGG 315
           KP R DE  RI+AAGG++I  NG RV GIL MSR++ GD  LK V TS+PEI+ T RE  
Sbjct: 252 KPDRSDEFARIKAAGGRVIFVNGARVEGILAMSRAI-GDKYLKPVVTSEPEITFTRREPD 310

Query: 316 DECLILASDGIWDVISDDLACRVASACLREGSAATA-PRSRYSDRADQ----RRHDAAAA 370
           DECLILASDG+WDV+S DLAC VAS CLREGS   A  R    D         R   AAA
Sbjct: 311 DECLILASDGLWDVLSSDLACEVASECLREGSPTVANARPNMEDEEGGALYPSRSILAAA 370

Query: 371 ILCRLALARGSHDNISVIVVDLRRK 395
           IL RLAL R S DNISVIVVDL+R+
Sbjct: 371 ILTRLALGRRSADNISVIVVDLKRE 395

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224122524|ref|XP_002318858.1| predicted protein [Populus trichocarpa] gi|222859531|gb|EEE97078.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359490226|ref|XP_002271035.2| PREDICTED: probable protein phosphatase 2C 75 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296084091|emb|CBI24479.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224134599|ref|XP_002321862.1| predicted protein [Populus trichocarpa] gi|222868858|gb|EEF05989.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15242182|ref|NP_199989.1| protein phosphatase [Arabidopsis thaliana] gi|75309185|sp|Q9FLI3.1|P2C75_ARATH RecName: Full=Probable protein phosphatase 2C 75; Short=AtPP2C75; AltName: Full=Protein ABA-HYPERSENSITIVE GERMINATION 1; AltName: Full=Protein phosphatase 2C AHG1; Short=PP2C AHG1 gi|10177875|dbj|BAB11245.1| protein phosphatase-2C; PP2C-like protein [Arabidopsis thaliana] gi|332008740|gb|AED96123.1| protein phosphatase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297792489|ref|XP_002864129.1| hypothetical protein ARALYDRAFT_495242 [Arabidopsis lyrata subsp. lyrata] gi|297309964|gb|EFH40388.1| hypothetical protein ARALYDRAFT_495242 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|147805175|emb|CAN73343.1| hypothetical protein VITISV_024269 [Vitis vinifera] Back     alignment and taxonomy information
>gi|7768151|emb|CAB90633.1| protein phpsphatase 2C (PP2C) [Fagus sylvatica] Back     alignment and taxonomy information
>gi|297746002|emb|CBI16058.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query400
TAIR|locus:2165371416 AHG1 "ABA-hypersensitive germi 0.76 0.730 0.387 1.3e-54
TAIR|locus:2043142362 HAI3 "highly ABA-induced PP2C 0.697 0.770 0.394 4.6e-50
TAIR|locus:2025087442 HAI2 "highly ABA-induced PP2C 0.592 0.536 0.393 7.7e-50
TAIR|locus:2168449413 HAI1 "highly ABA-induced PP2C 0.705 0.682 0.373 2.3e-46
TAIR|locus:2080787399 PP2CA "protein phosphatase 2CA 0.715 0.716 0.355 1.3e-45
TAIR|locus:2005488434 ABI1 "ABA INSENSITIVE 1" [Arab 0.722 0.665 0.382 1.1e-41
TAIR|locus:2030230511 HAB1 "AT1G72770" [Arabidopsis 0.765 0.598 0.348 5.5e-38
TAIR|locus:2164610423 ABI2 "AT5G57050" [Arabidopsis 0.745 0.704 0.36 1.1e-37
TAIR|locus:2007943511 HAB2 "homology to ABI2" [Arabi 0.75 0.587 0.347 9.2e-36
TAIR|locus:2183695354 AT5G10740 [Arabidopsis thalian 0.295 0.333 0.478 1.5e-29
TAIR|locus:2165371 AHG1 "ABA-hypersensitive germination 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 129/333 (38%), Positives = 185/333 (55%)

Query:    80 WLPTPSSENPMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSH 139
             W    + + P+  +G +S+ G +  M+D+V+VK    +P++   R +HFF+VYDGHGGS 
Sbjct:    98 WKGEETEDEPL--YGIVSVMGRSRKMEDSVTVKPNLCKPEVNRQRPVHFFAVYDGHGGSQ 155

Query:   140 VVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLV----RVAIQKSFKRMD 195
             V  L          ST MH     + +   E EE G     D+V    R  +++SFKRMD
Sbjct:   156 VSTL---------CSTTMHTFVKEELEQNLEEEEEGSEN--DVVERKWRGVMKRSFKRMD 204

Query:   196 QAALSTCALG-----CQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVP 250
             + A STC  G     C  +  +    GS A+ A+++ D ++VAN GDSRAVLCR+G  +P
Sbjct:   205 EMATSTCVCGTSVPLCNCDPREAAISGSTAVTAVLTHDHIIVANTGDSRAVLCRNGMAIP 264

Query:   251 PLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISIT 310
                D KP RPDE  RI AAGG+++  +G RV GIL  SR++G D  LK +   +PE++  
Sbjct:   265 LSNDHKPDRPDERARIEAAGGRVLVVDGARVEGILATSRAIG-DRYLKPMVAWEPEVTFM 323

Query:   311 EREGGDECLILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSXXXXXXX----XX 366
              RE GDECL+LASDG+WDV+S  LAC +A  CLRE + ++   +R +             
Sbjct:   324 RRESGDECLVLASDGLWDVLSSQLACDIARFCLREETPSSLDLNRMAQEDDNDGEQNPSR 383

Query:   367 XXXXXXXXXXXXXG--SHDNISVIVVDLRRKAK 397
                          G  S DNISV+V+DL+  ++
Sbjct:   384 SVLAATLLTRLALGRQSSDNISVVVIDLKNSSQ 416
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP
GO:0009062 "fatty acid catabolic process" evidence=RCA
GO:0009640 "photomorphogenesis" evidence=RCA
GO:0009793 "embryo development ending in seed dormancy" evidence=RCA
GO:0009845 "seed germination" evidence=RCA
GO:0009909 "regulation of flower development" evidence=RCA
GO:0009933 "meristem structural organization" evidence=RCA
GO:0010162 "seed dormancy process" evidence=RCA
GO:0010182 "sugar mediated signaling pathway" evidence=RCA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0016114 "terpenoid biosynthetic process" evidence=RCA
GO:0016567 "protein ubiquitination" evidence=RCA
GO:0019915 "lipid storage" evidence=RCA
GO:0050826 "response to freezing" evidence=RCA
TAIR|locus:2043142 HAI3 "highly ABA-induced PP2C gene 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2025087 HAI2 "highly ABA-induced PP2C gene 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168449 HAI1 "highly ABA-induced PP2C gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080787 PP2CA "protein phosphatase 2CA" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005488 ABI1 "ABA INSENSITIVE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030230 HAB1 "AT1G72770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164610 ABI2 "AT5G57050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007943 HAB2 "homology to ABI2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.824
3rd Layer3.1.30.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 6e-64
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 4e-58
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 2e-44
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 9e-29
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 5e-23
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 2e-16
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  204 bits (522), Expect = 6e-64
 Identities = 97/300 (32%), Positives = 141/300 (47%), Gaps = 48/300 (16%)

Query: 93  FGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIY 152
            G     G  ++ +DAV +K      D         F V+DGHGG              +
Sbjct: 3   AGVSDKGGDRKTNEDAVVIKPNLNNEDG------GLFGVFDGHGGHAAG---------EF 47

Query: 153 TSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMD 212
            S  +    L       E  E      E+ +  A++K+F R D+  L             
Sbjct: 48  ASKLLVEELL-------EELEETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARS- 99

Query: 213 LVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDELERIRAAGGK 272
               G+ A+VAL+ G+++ VAN GDSRAVLCR+G  V    D KP   +E ERI  AGG+
Sbjct: 100 ----GTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGR 155

Query: 273 LIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGIWDVISD 332
           +      RV G+L ++R+LG D  LK   +++P++++ +    D+ LILASDG+WDV+S+
Sbjct: 156 VS---NGRVPGVLAVTRALG-DFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSN 211

Query: 333 DLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVVDL 392
             A  +  + L +                      AA  L  LAL RGSHDNI+V+VV L
Sbjct: 212 QEAVDIVRSELAKEDL-----------------QEAAQELVDLALRRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 400
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.91
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.87
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.78
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.7
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.49
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.33
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 97.73
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=6.7e-52  Score=379.56  Aligned_cols=273  Identities=32%  Similarity=0.505  Sum_probs=238.1

Q ss_pred             CCCCCCCCCCeEEEEecccCCcCCccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhh
Q 035835           82 PTPSSENPMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLY  161 (400)
Q Consensus        82 ~~~~~~~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l  161 (400)
                      ....-+.+.++||+.|+||||-+|||++.....+-.+.    .+|+||+|||||.|+++|.+         |++++.+.+
T Consensus        13 hn~~G~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l----~dWSfFAVfDGHAGs~va~~---------c~~hLlehi   79 (379)
T KOG0697|consen   13 HNAEGEGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPL----EDWSFFAVFDGHAGSQVANH---------CAEHLLEHI   79 (379)
T ss_pred             ccccCcCCceeeeeccccchhhhhhhhhhhhhcCCCCc----cCceEEEEEcCccchHHHHH---------HHHHHHHHh
Confidence            33445778999999999999999999998876554333    78899999999999999999         999999988


Q ss_pred             cchhhhhhhhhhcCCcchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEeCCeEEEEEcCCceEE
Q 035835          162 LTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAV  241 (400)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~~~~l~vanvGDSRa~  241 (400)
                      ..+++|......    ..-+.++.-++.+|.++|+-+.....-.     ....++|||++.+++.+.++|++|||||||+
T Consensus        80 ~sse~F~~~~k~----gsv~~~~~GIrtGFL~iDE~mr~~~~~~-----~~~drsGsTAVcv~vsp~h~y~~NcGDSRav  150 (379)
T KOG0697|consen   80 ISSEEFRGMTKN----GSVENVEKGIRTGFLSIDEIMRTLSDIS-----KGSDRSGSTAVCVFVSPTHIYIINCGDSRAV  150 (379)
T ss_pred             hhhHHHhhhccC----CcHHHHHhhHhhcceeHHHHHhhhhhhh-----cccccCCceEEEEEecCceEEEEecCcchhh
Confidence            877888763321    2456778999999999999887664322     1234579999999999999999999999999


Q ss_pred             EEeCCcccCCCCCCCCCChhHHHHHHHhCCeEEecCCceeecceecccccCCCCccc---------ccccCCCeeEEEEe
Q 035835          242 LCRDGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLK---------RVTTSQPEISITER  312 (400)
Q Consensus       242 l~r~g~~~~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~k---------~~v~~eP~v~~~~l  312 (400)
                      |+|+|..+.-|.||+|.+|.|++||+.+||.|..   .|++|.|++||||| |+.+|         +.|+++|++....+
T Consensus       151 l~rng~~~f~TqDHKP~~p~EkeRIqnAGGSVMI---qRvNGsLAVSRAlG-DydyK~v~~kgp~eQlVSPEPev~~~~R  226 (379)
T KOG0697|consen  151 LCRNGEVVFSTQDHKPYLPKEKERIQNAGGSVMI---QRVNGSLAVSRALG-DYDYKNVPGKGPTEQLVSPEPEVYIIER  226 (379)
T ss_pred             eecCCceEEeccCCCCCChHHHHHHhcCCCeEEE---EEecceeeeehhcc-CcccccCCCCCchhcccCCCCceEEeec
Confidence            9999999999999999999999999999998864   59999999999999 99888         46999999999999


Q ss_pred             eCCCeEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHhcCCCCCeEEEEEEc
Q 035835          313 EGGDECLILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVVDL  392 (400)
Q Consensus       313 ~~~d~~LILaSDGlwd~ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rgs~DNiTvVVv~l  392 (400)
                      ...|+|||||+|||||+|+++|+|++++..+.-.                ++...+|..+++.++-+||.||+|+|||-|
T Consensus       227 ~eedeFivlACDGIwDVMtneelcefv~sRl~Vt----------------~dL~~vcn~VvDtCLhKGSRDNMsivlvcf  290 (379)
T KOG0697|consen  227 SEEDEFIVLACDGIWDVMTNEELCEFVKSRLEVT----------------SDLEEVCNDVVDTCLHKGSRDNMSIVLVCF  290 (379)
T ss_pred             cccCcEEEEEccchhhhcccHHHHHHHHhhheec----------------ccHHHHHHHHHHHHHhccCccCceEEEEec
Confidence            9999999999999999999999999999987432                247889999999999999999999999999


Q ss_pred             ccCC
Q 035835          393 RRKA  396 (400)
Q Consensus       393 ~~~~  396 (400)
                      ..-+
T Consensus       291 p~AP  294 (379)
T KOG0697|consen  291 PGAP  294 (379)
T ss_pred             CCCC
Confidence            7544

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 7e-44
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-43
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-43
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 3e-43
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 1e-39
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 2e-39
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 3e-39
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 3e-39
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 4e-39
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 6e-39
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 6e-22
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-20
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 3e-20
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 4e-18
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 7e-18
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 1e-17
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 9e-08
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 4e-07
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 5e-07
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 5e-04
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure 
Iteration: 1

 Score =  174 bits (441), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 125/329 (37%), Positives = 163/329 (49%), Gaps = 42/329 (12%)
Query: 90  MPEFGCISIQGLAESMDDAVSVKEEFFRPD---IVGGR-----TLHFFSVYDGHGGSHVV 141
           +P +G  SI G    M+DAVS    F +     ++ GR       HFF VYDGHGGS V 
Sbjct: 8   VPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVA 67
Query: 142 PLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALST 201
                     Y    MH L L +   K++     G  W +  + A+  SF R+D    S 
Sbjct: 68  N---------YCRERMH-LALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESV 117
Query: 202 CALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPD 261
                 PE+     +GS ++VA+V    + VANCGDSRAVLCR    +P   D KP R D
Sbjct: 118 A-----PET-----VGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDRED 167
Query: 262 ELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLIL 321
           E  RI AAGGK+I  NG RV+G+L MSRS+ GD  LK      PE++  +R   D+CLIL
Sbjct: 168 EAARIEAAGGKVIQWNGARVFGVLAMSRSI-GDRYLKPSIIPDPEVTAVKRVKEDDCLIL 226
Query: 322 ASDGIWDVISDDLACRVASA---------CLREGSAATAPRSRYSXXXXXXXXXXXXXXX 372
           ASDG+WDV++D+ AC +A            +  G++  A   R                 
Sbjct: 227 ASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERR--KEGKDPAAMSAAEYL 284
Query: 373 XXXXXXXGSHDNISVIVVDL--RRKAKGR 399
                  GS DNISV+VVDL  RRK K +
Sbjct: 285 SKLAIQRGSKDNISVVVVDLKPRRKLKSK 313
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query400
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 6e-88
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 4e-85
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-78
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 3e-76
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-73
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 4e-73
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 7e-72
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 2e-69
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 1e-61
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 1e-56
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 5e-55
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 2e-54
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 6e-29
1txo_A237 Putative bacterial enzyme; serine/threonine protei 3e-13
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 1e-12
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 1e-12
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 1e-11
3rnr_A211 Stage II sporulation E family protein; structural 1e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
 Score =  268 bits (686), Expect = 6e-88
 Identities = 128/328 (39%), Positives = 167/328 (50%), Gaps = 36/328 (10%)

Query: 88  NPMPEFGCISIQGLAESMDDAVSVKEEFFRPDIV--------GGRTLHFFSVYDGHGGSH 139
             +P +G  SI G    M+DAVS    F +                 HFF VYDGHGGS 
Sbjct: 6   KSVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQ 65

Query: 140 VVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAAL 199
           V           Y    MH L L +   K++     G  W +  + A+  SF R+D    
Sbjct: 66  VA---------NYCRERMH-LALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIE 115

Query: 200 STCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQR 259
           S                GS ++VA+V    + VANCGDSRAVLCR    +P   D KP R
Sbjct: 116 SVAPETV----------GSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDR 165

Query: 260 PDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECL 319
            DE  RI AAGGK+I  NG RV+G+L MSRS+ GD  LK      PE++  +R   D+CL
Sbjct: 166 EDEAARIEAAGGKVIQWNGARVFGVLAMSRSI-GDRYLKPSIIPDPEVTAVKRVKEDDCL 224

Query: 320 ILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHD-------AAAAIL 372
           ILASDG+WDV++D+ AC +A   +       A     S  AD+RR +       +AA  L
Sbjct: 225 ILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYL 284

Query: 373 CRLALARGSHDNISVIVVDLRRKAKGRS 400
            +LA+ RGS DNISV+VVDL+ + K +S
Sbjct: 285 SKLAIQRGSKDNISVVVVDLKPRRKLKS 312
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query400
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.82
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.76
3f79_A255 Probable two-component response regulator; adaptor 99.65
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.63
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.08
3eq2_A394 Probable two-component response regulator; adaptor 98.21
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
Probab=100.00  E-value=2.7e-51  Score=403.95  Aligned_cols=297  Identities=38%  Similarity=0.607  Sum_probs=233.3

Q ss_pred             CCCCeEEEEecccCCcCCccceeeecccccCC-------------CCCCcceEEEEEEcCCCCCcccchhcccccHHHHH
Q 035835           88 NPMPEFGCISIQGLAESMDDAVSVKEEFFRPD-------------IVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTS  154 (400)
Q Consensus        88 ~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~-------------~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~  154 (400)
                      .....||.+|++|+|.+|||++.+..++....             ........||||||||||+.+|++         |+
T Consensus        11 ~~~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~---------as   81 (337)
T 3qn1_B           11 DCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADY---------CR   81 (337)
T ss_dssp             CCSCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHH---------HH
T ss_pred             cccCceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHH---------HH
Confidence            45567999999999999999999987653210             001125789999999999999999         88


Q ss_pred             HHHHHhhcchhhhhhhhhhc----CCcchHHHHHHHHHHHHHHHHHHHHhhcccCC------CCCCCCcccCCceEEEEE
Q 035835          155 THMHYLYLTDTKTKQENEEV----GGAEWEDLVRVAIQKSFKRMDQAALSTCALGC------QPESMDLVFLGSAALVAL  224 (400)
Q Consensus       155 ~~~~~~l~~~~~~~~~~~~~----~~~~~~~~i~~~l~~af~~~d~~l~~~~~~~~------~~~~~~~~~~GsT~vv~l  224 (400)
                      +.++..|.  +.+.......    ........++++|.++|..+|+.+........      .........+|||+++++
T Consensus        82 ~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~  159 (337)
T 3qn1_B           82 DRLHFALA--EEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVAL  159 (337)
T ss_dssp             HHHHHHHH--HHHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEE
T ss_pred             HHHHHHHH--HHHHhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEE
Confidence            88888777  5554321110    01223457799999999999999987652111      112223456799999999


Q ss_pred             EeCCeEEEEEcCCceEEEEeCCcccCCCCCCCCCChhHHHHHHHhCCeEEecCCceeecceecccccCCCCcccccccCC
Q 035835          225 VSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQ  304 (400)
Q Consensus       225 i~~~~l~vanvGDSRa~l~r~g~~~~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~k~~v~~e  304 (400)
                      +.++++|++||||||+||+|+|++++||.||++.++.|..||..+||.|..+++.|++|.+++||+|| |..+|++++++
T Consensus       160 i~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalG-d~~~~~~v~~~  238 (337)
T 3qn1_B          160 VCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIG-DRYLKPYVIPE  238 (337)
T ss_dssp             ECSSEEEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEE-CGGGTTTSBCC
T ss_pred             EECCEEEEEeccCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccc-cccccCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999 99999999999


Q ss_pred             CeeEEEEeeCCCeEEEEEcCCCCCCCCHHHHHHHHHHHHHc----CCCCCCCCcccCccccchhHHHHHHHHHHHHHhcC
Q 035835          305 PEISITEREGGDECLILASDGIWDVISDDLACRVASACLRE----GSAATAPRSRYSDRADQRRHDAAAAILCRLALARG  380 (400)
Q Consensus       305 P~v~~~~l~~~d~~LILaSDGlwd~ls~eei~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rg  380 (400)
                      |++..+.+.+.++|||||||||||+|++++|+++++..+..    +...  +. ..........+..+|+.|++.|+.+|
T Consensus       239 pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~a~~Lv~~A~~~g  315 (337)
T 3qn1_B          239 PEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAP--PL-AERGKGIDPACQAAADYLSMLALQKG  315 (337)
T ss_dssp             CEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC-------CCSSCCHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccc--cc-cccccccChhHHHHHHHHHHHHHHcC
Confidence            99999998777779999999999999999999999875421    0000  00 00000012246789999999999999


Q ss_pred             CCCCeEEEEEEcccCCCCC
Q 035835          381 SHDNISVIVVDLRRKAKGR  399 (400)
Q Consensus       381 s~DNiTvVVv~l~~~~~~~  399 (400)
                      +.||||||||+|+.+.+.|
T Consensus       316 ~~DNiTvivv~l~~~~~~~  334 (337)
T 3qn1_B          316 SKDNISIIVIDLKAQRKFK  334 (337)
T ss_dssp             CCSCEEEEEEECCSCC---
T ss_pred             CCCCEEEEEEEecCCcccc
Confidence            9999999999998776554
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 400
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 4e-40
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 3e-16
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (358), Expect = 4e-40
 Identities = 86/325 (26%), Positives = 126/325 (38%), Gaps = 52/325 (16%)

Query: 83  TPSSENPMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVP 142
               +     +G  S+QG    M+DA +           G  +  FF+VYDGH GS V  
Sbjct: 13  NAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPS----GLESWSFFAVYDGHAGSQV-- 66

Query: 143 LNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTC 202
                      + +     L      Q+ +   GA   + V+  I+  F  +D+      
Sbjct: 67  -----------AKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMS 115

Query: 203 ALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDE 262
                 +       GS A+  L+S       NCGDSR +LCR+ +      D KP  P E
Sbjct: 116 EKKHGADRS-----GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLE 170

Query: 263 LERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITERE--------- 313
            ERI+ AGG ++ Q   RV G L +SR+LG D   K V    P   +   E         
Sbjct: 171 KERIQNAGGSVMIQ---RVNGSLAVSRALG-DFDYKCVHGKGPTEQLVSPEPEVHDIERS 226

Query: 314 -GGDECLILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAIL 372
              D+ +ILA DGIWDV+ ++  C    + L                      +     +
Sbjct: 227 EEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDL----------------EKVCNEV 270

Query: 373 CRLALARGSHDNISVIVVDLRRKAK 397
               L +GS DN+SVI++      K
Sbjct: 271 VDTCLYKGSRDNMSVILICFPNAPK 295
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query400
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-53  Score=409.43  Aligned_cols=269  Identities=31%  Similarity=0.454  Sum_probs=228.7

Q ss_pred             CCCCCeEEEEecccCCcCCccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhh
Q 035835           87 ENPMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTK  166 (400)
Q Consensus        87 ~~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~  166 (400)
                      ....++||++|++|+|.+|||++.+..++...    ...+.||||||||||+.+|++         ++++++..|.  +.
T Consensus        17 ~~~~~~~g~~s~~G~R~~~ED~~~~~~~~~~~----~~~~~lf~V~DGhGG~~~s~~---------~~~~l~~~l~--~~   81 (295)
T d1a6qa2          17 QGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSG----LESWSFFAVYDGHAGSQVAKY---------CCEHLLDHIT--NN   81 (295)
T ss_dssp             EETTEEEEEEEEEETSSSCCEEEEEEEEETTT----EEEEEEEEEEEEESCSHHHHH---------HHHHHHHHHH--TS
T ss_pred             cCCceEEEEEeCccCCCcccCeeEEEcccCCC----CCceEEEEEEeCCCChHHHHH---------HHHHHHHHHH--Hh
Confidence            56789999999999999999999987765322    256789999999999999999         8888888876  33


Q ss_pred             hhhhhhhcCCcchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEeCCeEEEEEcCCceEEEEeCC
Q 035835          167 TKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDG  246 (400)
Q Consensus       167 ~~~~~~~~~~~~~~~~i~~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~~~~l~vanvGDSRa~l~r~g  246 (400)
                      +...  ........+.+.++|+++|.++++.+.........     ...+|||++++++.++++|||||||||||++++|
T Consensus        82 ~~~~--~~~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~-----~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~  154 (295)
T d1a6qa2          82 QDFK--GSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHG-----ADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR  154 (295)
T ss_dssp             HHHH--CSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCCEECEEEEEECSSEEEEEEESSCEEEEEETT
T ss_pred             hhhc--cccccchHHHHHHHHHHHHHHHHHHHhhhhhhccC-----cCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecc
Confidence            2211  11123455678999999999999998776543322     3455999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCChhHHHHHHHhCCeEEecCCceeecceecccccCCCCccc---------ccccCCCeeEEEEee-CCC
Q 035835          247 RPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLK---------RVTTSQPEISITERE-GGD  316 (400)
Q Consensus       247 ~~~~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~k---------~~v~~eP~v~~~~l~-~~d  316 (400)
                      .+++||.||++.++.|++||++.||.|.   ..|++|.+++||+|| |..+|         ++|+++|++..+++. ++|
T Consensus       155 ~~~~lT~dH~~~~~~E~~Ri~~~gg~v~---~~r~~g~l~~tRa~G-d~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~  230 (295)
T d1a6qa2         155 KVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALG-DFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDD  230 (295)
T ss_dssp             EEEEECCCCCTTSHHHHHHHHHTTCCEE---TTEETTTBSCSBCEE-CGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTE
T ss_pred             cceeeccccCcccHHHHhhHhhcCCccc---ccccCCceeeeeccC-cHHhhhccccCcccccccccccceEEEeecccc
Confidence            9999999999999999999999999885   358999999999999 98877         469999999999885 556


Q ss_pred             eEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHhcCCCCCeEEEEEEcccCC
Q 035835          317 ECLILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVVDLRRKA  396 (400)
Q Consensus       317 ~~LILaSDGlwd~ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rgs~DNiTvVVv~l~~~~  396 (400)
                      +|||||||||||+|+++|++++++..+....                ++..+|+.|++.|+.+++.||||||||+|+..+
T Consensus       231 ~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~----------------~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         231 QFIILACDGIWDVMGNEELCDFVRSRLEVTD----------------DLEKVCNEVVDTCLYKGSRDNMSVILICFPNAP  294 (295)
T ss_dssp             EEEEEECHHHHTTSCHHHHHHHHHHHHTTCC----------------CHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSC
T ss_pred             eeEeeecCcccccCCHHHHHHHHHHHhhcCC----------------CHHHHHHHHHHHHHhcCCCCCeEEEEEeccCCC
Confidence            7999999999999999999999998874322                478999999999999999999999999998765


Q ss_pred             C
Q 035835          397 K  397 (400)
Q Consensus       397 ~  397 (400)
                      +
T Consensus       295 k  295 (295)
T d1a6qa2         295 K  295 (295)
T ss_dssp             C
T ss_pred             c
Confidence            3
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure