Citrus Sinensis ID: 035868

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
MAITTDETKANDDDQVYQKGVKNLCENGVTKVPKKYILPEFDRADEVLQVDLTMPNLKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLHSLPFNSMVSPSPSLINKANPRRYKDTDFACFLEYISSFEPKRKNFLESRKLL
ccccccccccccccccccccHHHHHHccccccccccccccccccccHHccccccccccccEEEccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHccccccccEEcccccccccccccccEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccEEEEEEcccccccccccccccccccccccEEEEccccccEEEEEccEEEEcccccccEEEEEccEEEEEEcccccccccEEEccccccEEEEEEEEccccccEEEccccccccccccccccccHHHHHHHHHHccccccccccccccc
ccccccHcccccccccccHHHHHHHHcccccccHHcEcccccccccccccccccccccccEEEHHccccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEcEEEEEEccccccHHHHEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccHHHHHccHHHHcEEEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccEcccHHHcccccccccccccHHHHHHHHHHcccccccHHHHHHcc
maittdetkandddqvYQKGVKNLcengvtkvpkkyilpefdradevlqvdltmpnlklpvidfselqgpnrsEVLKSLTSACEKYGFFQvvnhgipnnviSSMIDVSARFFELPIEVRSKymssdltapvrygtsfnqnkdrVFCWRDFLklvchpsqdvlvhwpsyptdMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQdgsqqmvvncyppcpephltlgmpphsdyGFLTLLLQDDVEGLQIQYKEKWVAVQPLASsfvvnvgdhleifsngkyRSVLHRVLVNPAKSRISVAslhslpfnsmvspspslinkanprrykdtdfACFLEYISSFEPKRKNFLESRKLL
maittdetkandddqvyqkgvknlcengvtkvpkkyilPEFDRADEVLQVDLTMPNLKLPvidfselqgpNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPsqdvlvhwpsyptDMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLhslpfnsmvspspslinkanprRYKDTDFACFLEyissfepkrknflesrkll
MAITTDETKANDDDQVYQKGVKNLCENGVTKVPKKYILPEFDRADEVLQVDLTMPNLKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLHSLPFNSMVSPSPSLINKANPRRYKDTDFACFLEYISSFEPKRKNFLESRKLL
****************YQKGVKNLCENGVTKVPKKYILPEFDRADEVLQVDLTMPNLKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLHSL*******************RYKDTDFACFLEYISSF**************
******E*****D**VYQKGVKNLCENGVTKVPKKYILPEF*************PNLKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSK**********RYGTSFNQNKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLHSLPFNSMVSPSPSLINKANPRRYKDTDFACFLEYISSFEPKRKNFLESRKLL
MAITTDETKANDDDQVYQKGVKNLCENGVTKVPKKYILPEFDRADEVLQVDLTMPNLKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLHSLPFNSMVSPSPSLINKANPRRYKDTDFACFLEYISSFEPKRKN********
**************QVYQKGVKNLCENGVTKVPKKYILPEFDRADEVLQVDLTMPNLKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLHSLPFNSMVSPSPSLINKANPRRYKDTDFACFLEYISSFEPKRKNFLESRKLL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAITTDETKANDDDQVYQKGVKNLCENGVTKVPKKYILPEFDRADEVLQVDLTMPNLKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLHSLPFNSMVSPSPSLINKANPRRYKDTDFACFLEYISSFEPKRKNFLESRKLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query370 2.2.26 [Sep-21-2011]
D4N501364 Probable 2-oxoglutarate/F N/A no 0.816 0.829 0.354 2e-49
D4N500364 Thebaine 6-O-demethylase N/A no 0.908 0.923 0.333 4e-49
Q9LTH8364 1-aminocyclopropane-1-car no no 0.870 0.884 0.352 9e-49
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.854 0.875 0.345 1e-48
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.856 0.878 0.348 2e-48
D4N502360 Codeine O-demethylase OS= N/A no 0.816 0.838 0.348 8e-48
P93824360 1-aminocyclopropane-1-car no no 0.872 0.897 0.338 6e-47
Q9LTH7366 1-aminocyclopropane-1-car no no 0.845 0.855 0.341 3e-46
Q39224358 Protein SRG1 OS=Arabidops no no 0.818 0.846 0.346 6e-46
O04274362 Leucoanthocyanidin dioxyg N/A no 0.881 0.900 0.319 6e-46
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function desciption
 Score =  196 bits (499), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 185/319 (57%), Gaps = 17/319 (5%)

Query: 59  LPVIDFSEL--QGPNRSEV-LKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELP 115
           +PVID   L    P   ++ L  L SAC+++GFFQVVNHG+  +++ ++      FF L 
Sbjct: 55  VPVIDIENLISSEPVTEKLELDRLHSACKEWGFFQVVNHGVDTSLVDNVKSDIQGFFNLS 114

Query: 116 IEVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQDVLVH-WPSYPTDMRR 174
           +  + KY   D      +G +F  ++D+   W D   ++  P      H +   P  +R 
Sbjct: 115 MNEKIKYGQKDGDVE-GFGQAFVASEDQTLDWADIFMILTLPLHLRKPHLFSKLPLPLRE 173

Query: 175 LAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCP 234
              +Y+ E+K L ++L E + ++L +         E++++ + F+D +Q M +N YPPCP
Sbjct: 174 TIESYSSEMKKLSMVLFEKMEKALQVQAV------EIKEISEVFKDMTQVMRMNYYPPCP 227

Query: 235 EPHLTLGMPPHSDYGFLTLLLQ-DDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSN 293
           +P L +G+ PHSD+G LT+LLQ ++VEGLQI+ + +W++V+PL ++FVVNVGD LEI +N
Sbjct: 228 QPELAIGLTPHSDFGGLTILLQLNEVEGLQIKNEGRWISVKPLPNAFVVNVGDVLEIMTN 287

Query: 294 GKYRSVLHRVLVNPAKSRISVASLHSLPFNSMVSPSPSLINKANPRRYKDTDFACFLEYI 353
           G YRSV HR +VN  K R+S+A+ H     S + P  SLI    P  ++    + + E +
Sbjct: 288 GMYRSVDHRAVVNSTKERLSIATFHDPNLESEIGPISSLITPNTPALFRSG--STYGELV 345

Query: 354 SSFEPKR---KNFLESRKL 369
             F  ++   K+FL+S ++
Sbjct: 346 EEFHSRKLDGKSFLDSMRM 364
Non-heme dioxygenase active on an unknown substrate. No activity with (S)-reticuline, salutaridine, papaverine, (S)-corytuberine, oripavine, (S)-scoulerine, pavine, noscapine, codeine or thebaine.
Papaver somniferum (taxid: 3469)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1 Back     alignment and function description
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function description
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|P93824|ACCH6_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis thaliana GN=At1g04350 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTH7|ACH12_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 12 OS=Arabidopsis thaliana GN=At5g59540 PE=2 SV=1 Back     alignment and function description
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|O04274|LDOX_PERFR Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query370
225441110386 PREDICTED: probable 2-oxoglutarate/Fe(II 0.986 0.945 0.704 1e-153
255556790378 Leucoanthocyanidin dioxygenase, putative 0.975 0.955 0.689 1e-143
225448882374 PREDICTED: probable 2-oxoglutarate/Fe(II 0.991 0.981 0.657 1e-137
359807073375 uncharacterized protein LOC100778488 [Gl 0.989 0.976 0.628 1e-137
224113159382 predicted protein [Populus trichocarpa] 0.948 0.918 0.659 1e-137
357440313375 Naringenin,2-oxoglutarate 3-dioxygenase 0.989 0.976 0.631 1e-136
356533361382 PREDICTED: probable 2-oxoglutarate/Fe(II 0.997 0.965 0.626 1e-135
42569681366 2-oxoglutarate (2OG) and Fe(II)-dependen 0.945 0.956 0.652 1e-134
356546028381 PREDICTED: probable 2-oxoglutarate/Fe(II 0.997 0.968 0.614 1e-133
449440447375 PREDICTED: leucoanthocyanidin dioxygenas 0.986 0.973 0.621 1e-133
>gi|225441110|ref|XP_002265059.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/376 (70%), Positives = 310/376 (82%), Gaps = 11/376 (2%)

Query: 1   MAITTDETKANDD-DQVYQKGVKNLCENGVTKVPKKYILPEFDRADEVLQVDLTMPN--- 56
           M ITT+  + ND  D  YQ GVK+LCENG++KVP KYILP  +R       D  +PN   
Sbjct: 14  MGITTESKQENDPLDTHYQNGVKHLCENGISKVPNKYILPVSERPSS----DNGVPNAAE 69

Query: 57  --LKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFEL 114
             L LPVIDF+ELQG NRS+VLKS+ +ACE+YGFFQ+VNHGIP+++ISSMIDVS RFF+L
Sbjct: 70  LSLNLPVIDFAELQGSNRSQVLKSIANACEEYGFFQLVNHGIPSDIISSMIDVSQRFFDL 129

Query: 115 PIEVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMRR 174
           P+E R+KYMS+D+ +PVRYGTSFNQ KD VFCWRDFLKL+CHP  DVL HWPS P D R+
Sbjct: 130 PMEERAKYMSADMCSPVRYGTSFNQTKDGVFCWRDFLKLMCHPLSDVLPHWPSSPVDFRK 189

Query: 175 LAVTYAKEIKNLFVMLMEAILESLGLWGATMNMT-EEVEKLIKQFQDGSQQMVVNCYPPC 233
           LAVTY+KE K LF+ LMEAILESLGL G T   T EE + ++++FQDGSQ MVVNCYPPC
Sbjct: 190 LAVTYSKETKYLFLTLMEAILESLGLCGDTKKKTGEEDDDILEKFQDGSQLMVVNCYPPC 249

Query: 234 PEPHLTLGMPPHSDYGFLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSN 293
           PEP LTLGMPPHSDYGFLTLLLQDD++GLQIQ+K KW+ V+PLA+SFV+N+GDHLEIFSN
Sbjct: 250 PEPELTLGMPPHSDYGFLTLLLQDDIQGLQIQFKGKWLTVEPLANSFVINIGDHLEIFSN 309

Query: 294 GKYRSVLHRVLVNPAKSRISVASLHSLPFNSMVSPSPSLINKANPRRYKDTDFACFLEYI 353
           GKY+SVLHRV+VN  K RISVASLHSLPF  MV P+P LI++ NPR YKDTDFA FL+YI
Sbjct: 310 GKYKSVLHRVVVNSTKPRISVASLHSLPFKCMVKPAPQLISQENPRHYKDTDFASFLDYI 369

Query: 354 SSFEPKRKNFLESRKL 369
           SS EPKRKNFLESRKL
Sbjct: 370 SSCEPKRKNFLESRKL 385

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255556790|ref|XP_002519428.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223541291|gb|EEF42842.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225448882|ref|XP_002270667.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Vitis vinifera] gi|296083477|emb|CBI23435.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359807073|ref|NP_001241598.1| uncharacterized protein LOC100778488 [Glycine max] gi|255641068|gb|ACU20813.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224113159|ref|XP_002316410.1| predicted protein [Populus trichocarpa] gi|222865450|gb|EEF02581.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357440313|ref|XP_003590434.1| Naringenin,2-oxoglutarate 3-dioxygenase [Medicago truncatula] gi|355479482|gb|AES60685.1| Naringenin,2-oxoglutarate 3-dioxygenase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356533361|ref|XP_003535233.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|42569681|ref|NP_181207.2| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] gi|330254192|gb|AEC09286.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356546028|ref|XP_003541434.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|449440447|ref|XP_004137996.1| PREDICTED: leucoanthocyanidin dioxygenase-like [Cucumis sativus] gi|449524760|ref|XP_004169389.1| PREDICTED: leucoanthocyanidin dioxygenase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query370
TAIR|locus:2040575366 AT2G36690 [Arabidopsis thalian 0.945 0.956 0.652 8.9e-125
TAIR|locus:2042356357 AT2G44800 [Arabidopsis thalian 0.945 0.980 0.424 6.1e-71
TAIR|locus:2081962357 AT3G60290 [Arabidopsis thalian 0.940 0.974 0.425 3.8e-69
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.840 0.891 0.390 2.6e-63
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.845 0.899 0.384 1.3e-61
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.827 0.897 0.378 4.9e-53
TAIR|locus:2183429340 KUOX1 "KAR-UP oxidoreductase 1 0.686 0.747 0.412 1.3e-52
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.916 0.931 0.340 6.7e-49
TAIR|locus:2148403364 AT5G59530 [Arabidopsis thalian 0.862 0.876 0.361 8.5e-49
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.897 0.940 0.344 1.1e-48
TAIR|locus:2040575 AT2G36690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1226 (436.6 bits), Expect = 8.9e-125, P = 8.9e-125
 Identities = 235/360 (65%), Positives = 279/360 (77%)

Query:    12 DDDQVYQKGVKNLCENGVTKVPKKYILPEFDRADEVLQVDLTMPN--LKLPVIDFSELQG 69
             ++++ YQKGVK+LCENG+TKVP KYI PE DR        L  PN  LKLP+IDF+EL G
Sbjct:    12 EENKKYQKGVKHLCENGLTKVPTKYIWPEPDRPILTKSDKLIKPNKNLKLPLIDFAELLG 71

Query:    70 PNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTA 129
             PNR  VL+++  AC+ YGFFQVVNHG+  +V  +MIDV  RFFELP E RSKYMSSD++A
Sbjct:    72 PNRPHVLRTIAEACKTYGFFQVVNHGMEGDVSKNMIDVCKRFFELPYEERSKYMSSDMSA 131

Query:   130 PVRYGTSFNQNKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMRRLAVTYAKEIKNLFVM 189
             PVRYGTSFNQ KD VFCWRDFLKL  HP  D L HWPS P+D R  A TYAKE K +F M
Sbjct:   132 PVRYGTSFNQIKDNVFCWRDFLKLYAHPLPDYLPHWPSSPSDFRSSAATYAKETKEMFEM 191

Query:   190 LMEAILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYG 249
             +++AILESL + G+        ++  K+ ++GSQ +VVNCYPPCPEP LTLGMPPHSDYG
Sbjct:   192 MVKAILESLEIDGS--------DEAAKELEEGSQVVVVNCYPPCPEPELTLGMPPHSDYG 243

Query:   250 FLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAK 309
             FLTLLLQD+VEGLQI Y+++WV V P+  SFVVNVGDHLEIFSNG+Y+SVLHRVLVN  K
Sbjct:   244 FLTLLLQDEVEGLQILYRDEWVTVDPIPGSFVVNVGDHLEIFSNGRYKSVLHRVLVNSTK 303

Query:   310 SRISVASLHSLPFNSMVSPSPSLINKANPRRYKDTDFACFLEYISSFEPKRKNFLESRKL 369
              RISVASLHS P  S+V PSP L++K NP +Y DTDF  FL+YI+S EPK KNFLESRK+
Sbjct:   304 PRISVASLHSFPLTSVVKPSPKLVDKHNPSQYMDTDFTTFLQYITSREPKWKNFLESRKI 363
GO:0005737 "cytoplasm" evidence=ISM
GO:0009058 "biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2042356 AT2G44800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081962 AT3G60290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183429 KUOX1 "KAR-UP oxidoreductase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148403 AT5G59530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer4.2.1.78LOW CONFIDENCE prediction!
3rd Layer4.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query370
PLN02947374 PLN02947, PLN02947, oxidoreductase 0.0
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-105
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 5e-88
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 8e-88
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 6e-72
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-71
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-69
PLN02216357 PLN02216, PLN02216, protein SRG1 4e-60
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 1e-55
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 2e-55
PLN02704335 PLN02704, PLN02704, flavonol synthase 4e-55
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 8e-52
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 3e-51
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 6e-50
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 2e-49
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 8e-48
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 2e-47
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 7e-43
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 4e-36
PLN02485329 PLN02485, PLN02485, oxidoreductase 4e-35
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-34
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-33
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 4e-33
PLN02997325 PLN02997, PLN02997, flavonol synthase 5e-32
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 6e-32
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-29
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 2e-16
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 4e-09
PLN028581378 PLN02858, PLN02858, fructose-bisphosphate aldolase 0.001
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information 
 Score =  624 bits (1611), Expect = 0.0
 Identities = 241/373 (64%), Positives = 285/373 (76%), Gaps = 10/373 (2%)

Query: 1   MAITTDETKANDDDQ---VYQKGVKNLCENGVTKVPKKYILPEFDR-ADEVLQVDLTMPN 56
           MA    E    ++D     YQKGVK+LC++G+TKVP KYILP  DR      +      N
Sbjct: 5   MAAEVAEEANIEEDDESSKYQKGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGN 64

Query: 57  LKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPI 116
           LKLPVID +EL+G NR  VL +L +AC +YGFFQVVNHG+P+ VI  MIDV+ RFFELP+
Sbjct: 65  LKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPL 124

Query: 117 EVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMRRLA 176
           E R+KYMS+D+ APVRYGTSFNQNKD VFCWRDFLKLVCHP  DVL HWPS P D+R++A
Sbjct: 125 EERAKYMSADMRAPVRYGTSFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLRKVA 184

Query: 177 VTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEP 236
            TYAK  K LF+ LMEAILESLG+           ++L+++F+ GSQ MVVNCYP CPEP
Sbjct: 185 ATYAKATKRLFLELMEAILESLGIVK------RGSDELLEEFEAGSQMMVVNCYPACPEP 238

Query: 237 HLTLGMPPHSDYGFLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKY 296
            LTLGMPPHSDYGFLTLLLQD+VEGLQI +  +WV V+P+  SFVVNVGDHLEIFSNG+Y
Sbjct: 239 ELTLGMPPHSDYGFLTLLLQDEVEGLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRY 298

Query: 297 RSVLHRVLVNPAKSRISVASLHSLPFNSMVSPSPSLINKANPRRYKDTDFACFLEYISSF 356
           +SVLHRV VN  K RISVASLHSLPF  +V P+P L+++ NPRRY DTDFA FL Y++S 
Sbjct: 299 KSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPELVDEQNPRRYMDTDFATFLAYLASA 358

Query: 357 EPKRKNFLESRKL 369
           E K KNFLESRKL
Sbjct: 359 EGKHKNFLESRKL 371

Length = 374
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|215463 PLN02858, PLN02858, fructose-bisphosphate aldolase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 370
PLN02947374 oxidoreductase 100.0
PLN02216357 protein SRG1 100.0
PLN02904357 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02276361 gibberellin 20-oxidase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02704335 flavonol synthase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02997325 flavonol synthase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02485329 oxidoreductase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.93
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.89
PLN03176120 flavanone-3-hydroxylase; Provisional 99.87
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.88
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.47
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.28
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 90.45
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 85.3
TIGR02466201 conserved hypothetical protein. This family consis 85.0
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 83.98
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 82.41
>PLN02947 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=1.5e-88  Score=665.11  Aligned_cols=349  Identities=68%  Similarity=1.156  Sum_probs=308.2

Q ss_pred             ccccccHHHHHHCCCCCCCCCCCCCCCCCCcccccccc-CCCCCCCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEe
Q 035868           15 QVYQKGVKNLCENGVTKVPKKYILPEFDRADEVLQVDL-TMPNLKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVN   93 (370)
Q Consensus        15 ~~~~~~v~~l~~~~~~~vp~~y~~~~~~~~~~~~~~~~-~~~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~n   93 (370)
                      +.-+.+||.|+++|+++||++||+|++++|........ .....+||||||+.+.++.+..++++|.+||++||||||+|
T Consensus        22 ~~~~~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~n  101 (374)
T PLN02947         22 SKYQKGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVN  101 (374)
T ss_pred             ceeecCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEc
Confidence            44567899999999999999999999998753210000 01235799999998864357789999999999999999999


Q ss_pred             CCCChHHHHHHHHHhhhhhCCCHHHHhhhccCCCCCCeecccccCCCCCcccccccccccccCCCCCccCCCCCCchhHH
Q 035868           94 HGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMR  173 (370)
Q Consensus        94 HGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~Gy~~~~~~~~~~~~dw~e~~~~~~~p~~~~~~~WP~~~~~fr  173 (370)
                      ||||.++++++++.+++||+||.|+|+++...+.....||+..+....++..+|+|.+.+...|.....+.||+.+++||
T Consensus       102 HGIp~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~WP~~~~~fr  181 (374)
T PLN02947        102 HGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYGTSFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLR  181 (374)
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeeccccccccccccCceeceeeecCCcccccccCccchHHHH
Confidence            99999999999999999999999999998654444456887665545566789999998777776545689999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHhccCCCcceEeeecCCCCCCCCccccCCccccCCeeE
Q 035868          174 RLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTL  253 (370)
Q Consensus       174 ~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~l~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~g~lTl  253 (370)
                      +.+++|+++|.+|+.+||++|+++|||+++.      ..+|.+.+....+.||+||||||++|+.++|+++|||+|+|||
T Consensus       182 ~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~------~~~~~~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTl  255 (374)
T PLN02947        182 KVAATYAKATKRLFLELMEAILESLGIVKRG------SDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTL  255 (374)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCCccc------hHHHHHHhcCcceeeeeecCCCCCCcccccCCCCccCCCceEE
Confidence            9999999999999999999999999997430      0166666766778999999999999999999999999999999


Q ss_pred             EeeCCCCCeeEEeCCeEEEecCCCCeEEEEeCcchhhhhCCccccccceeecCCCCCeEEEEEeecCCCCCeeeCCcccc
Q 035868          254 LLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLHSLPFNSMVSPSPSLI  333 (370)
Q Consensus       254 L~qd~v~GLqV~~~g~W~~V~p~pgalvVNvGD~Lq~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~P~~~lv  333 (370)
                      |+||+++||||+++|+|++|+|+||+|||||||+||+||||+|||++|||++++.++||||+||++|+.|++|+|+++|+
T Consensus       256 L~Qd~v~GLQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~lv  335 (374)
T PLN02947        256 LLQDEVEGLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPELV  335 (374)
T ss_pred             EEecCCCCeeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCCCCEEeCChHhc
Confidence            99999999999999999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHhcCCCCCcccccccC
Q 035868          334 NKANPRRYKDTDFACFLEYISSFEPKRKNFLESRKL  369 (370)
Q Consensus       334 ~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~l~~~~~  369 (370)
                      ++++|++|++++|+||++.++++...+++.++.+|+
T Consensus       336 ~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~l~~~~~  371 (374)
T PLN02947        336 DEQNPRRYMDTDFATFLAYLASAEGKHKNFLESRKL  371 (374)
T ss_pred             CCCCCCcCCCCCHHHHHHHHHHhccCchhhhhhhhc
Confidence            999999999999999999999999999999999987

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query370
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-46
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-46
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 3e-45
1w9y_A319 The Structure Of Acc Oxidase Length = 319 6e-34
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 4e-14
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 1e-06
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 1e-06
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 8e-05
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 177/340 (52%), Gaps = 14/340 (4%)
Query: 21  VKNLCENGVTKVPKKYILP--EFDRADEVLQVDLTMPNLKLPVIDFSELQGPN---RSEV 75
           V++L ++G+  +PK+YI P  E +  ++V   +      ++P ID   ++  +   R   
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66
Query: 76  LKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVR-YG 134
           ++ L  A   +G   ++NHGIP +++  +      FF L +E + KY +   T  ++ YG
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126
Query: 135 TSFNQNKDRVFCWRDFLKLVCHPSQDV-LVHWPSYPTDMRRLAVTYAKEIKNLFVMLMEA 193
           +    N      W D+   + +P +   L  WP  P+D       YAK ++ L   + +A
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 186
Query: 194 ILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTL 253
           +   LGL        + +EK +   ++   QM +N YP CP+P L LG+  H+D   LT 
Sbjct: 187 LSVGLGL------EPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTF 240
Query: 254 LLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRIS 313
           +L + V GLQ+ Y+ KWV  + +  S V+++GD LEI SNGKY+S+LHR LVN  K RIS
Sbjct: 241 ILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRIS 300
Query: 314 VASLHSLPFNSMV-SPSPSLINKANPRRYKDTDFACFLEY 352
            A     P + +V  P P +++  +P ++    FA  +E+
Sbjct: 301 WAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEH 340
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query370
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-143
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-127
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 2e-76
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 3e-73
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 5e-70
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 5e-68
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  410 bits (1055), Expect = e-143
 Identities = 106/357 (29%), Positives = 180/357 (50%), Gaps = 18/357 (5%)

Query: 21  VKNLCENGVTKVPKKYILPEFDR--ADEVLQVDLTMPNLKLPVIDFSELQGPN---RSEV 75
           V++L ++G+  +PK+YI P+ +    ++V   +      ++P ID   ++  +   R   
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66

Query: 76  LKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVR-YG 134
           ++ L  A   +G   ++NHGIP +++  +      FF L +E + KY +   T  ++ YG
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126

Query: 135 TSFNQNKDRVFCWRDFLKLVCHPSQDVLVH-WPSYPTDMRRLAVTYAKEIKNLFVMLMEA 193
           +    N      W D+   + +P +   +  WP  P+D       YAK ++ L   + +A
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 186

Query: 194 ILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTL 253
           +   LGL        + +EK +   ++   QM +N YP CP+P L LG+  H+D   LT 
Sbjct: 187 LSVGLGL------EPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTF 240

Query: 254 LLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRIS 313
           +L + V GLQ+ Y+ KWV  + +  S V+++GD LEI SNGKY+S+LHR LVN  K RIS
Sbjct: 241 ILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRIS 300

Query: 314 VASLHSLPFNSMV-SPSPSLINKANPRRYKDTDFACFLEYISSFEPKRKNFLESRKL 369
            A     P + +V  P P +++  +P ++    FA  +E+    +   K   E    
Sbjct: 301 WAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEH----KLFGKEQEELVSE 353
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query370
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.05
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 95.01
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 92.02
3i3q_A211 Alpha-ketoglutarate-dependent dioxygenase ALKB; be 87.94
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 87.18
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 86.33
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 83.38
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 82.34
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=5.7e-86  Score=644.99  Aligned_cols=338  Identities=30%  Similarity=0.544  Sum_probs=299.6

Q ss_pred             ccccHHHHHHCCCCCCCCCCCCCCCCCCccccc--cccCCCCCCCceeeCCCCCC--C-ChHHHHHHHHHHHHHcCeEEE
Q 035868           17 YQKGVKNLCENGVTKVPKKYILPEFDRADEVLQ--VDLTMPNLKLPVIDFSELQG--P-NRSEVLKSLTSACEKYGFFQV   91 (370)
Q Consensus        17 ~~~~v~~l~~~~~~~vp~~y~~~~~~~~~~~~~--~~~~~~~~~iPvIDls~l~~--~-~~~~~~~~l~~A~~~~GfF~v   91 (370)
                      ++++||+|+++|+.+||++|++|+++++.....  ........+||||||+.|.+  + .+.+++++|.+||++||||||
T Consensus         3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v   82 (356)
T 1gp6_A            3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL   82 (356)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred             CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEE
Confidence            567899999999999999999998877653210  00000014699999999863  2 367799999999999999999


Q ss_pred             EeCCCChHHHHHHHHHhhhhhCCCHHHHhhhccCCC-CCCeecccccCCCCCcccccccccccccCCCC-CccCCCCCCc
Q 035868           92 VNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDL-TAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQ-DVLVHWPSYP  169 (370)
Q Consensus        92 ~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~-~~~~Gy~~~~~~~~~~~~dw~e~~~~~~~p~~-~~~~~WP~~~  169 (370)
                      +||||+.++++++++.+++||+||.|+|+++..... ..+.||+........+..||+|.|.+...|.. ...+.||+.+
T Consensus        83 ~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~  162 (356)
T 1gp6_A           83 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP  162 (356)
T ss_dssp             ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSS
T ss_pred             eCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcc
Confidence            999999999999999999999999999999965544 46789987655455668899999998776643 3468999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHhcc---CCCcceEeeecCCCCCCCCccccCCcc
Q 035868          170 TDMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQ---DGSQQMVVNCYPPCPEPHLTLGMPPHS  246 (370)
Q Consensus       170 ~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~l~~~~~---~~~~~lr~~~YPp~~~~~~~~g~~~Ht  246 (370)
                      +.||+.+++|+++|.+|+.+||++|+++|||+++         +|.+.+.   ...+.||+||||||++|+.++|+++||
T Consensus       163 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~---------~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~Ht  233 (356)
T 1gp6_A          163 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPD---------RLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHT  233 (356)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT---------HHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEEC
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH---------HHHHHhcccCCccceeeeeecCCCCCcccccCcCCcc
Confidence            9999999999999999999999999999999999         9998886   466789999999999999999999999


Q ss_pred             ccCCeeEEeeCCCCCeeEEeCCeEEEecCCCCeEEEEeCcchhhhhCCccccccceeecCCCCCeEEEEEeecCCCCC-e
Q 035868          247 DYGFLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLHSLPFNS-M  325 (370)
Q Consensus       247 D~g~lTlL~qd~v~GLqV~~~g~W~~V~p~pgalvVNvGD~Lq~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~-~  325 (370)
                      |+|+||||+||+++||||+++|+|++|+|+||+|||||||+||+||||+|||++|||+++++++|||++||++|+.|+ +
T Consensus       234 D~g~lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~  313 (356)
T 1gp6_A          234 DVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIV  313 (356)
T ss_dssp             CCSSEEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCE
T ss_pred             CCCeEEEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcE
Confidence            999999999999999999999999999999999999999999999999999999999999889999999999999999 9


Q ss_pred             eeCCccccCCCCCCCCCCccHHHHHHHHHhcCCCCCcc
Q 035868          326 VSPSPSLINKANPRRYKDTDFACFLEYISSFEPKRKNF  363 (370)
Q Consensus       326 i~P~~~lv~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~  363 (370)
                      |+|+++|+++++|++|+++||+||+..++++++++|..
T Consensus       314 i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~  351 (356)
T 1gp6_A          314 LKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELV  351 (356)
T ss_dssp             ECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred             EeCChhhcCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence            99999999999999999999999999988887777644
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ... Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 370
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 4e-73
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 5e-61
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 5e-51
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-41
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  229 bits (584), Expect = 4e-73
 Identities = 105/340 (30%), Positives = 175/340 (51%), Gaps = 14/340 (4%)

Query: 21  VKNLCENGVTKVPKKYILPEFDR--ADEVLQVDLTMPNLKLPVIDFSELQGPN---RSEV 75
           V++L ++G+  +PK+YI P+ +    ++V   +      ++P ID   ++  +   R   
Sbjct: 6   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 65

Query: 76  LKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVR-YG 134
           ++ L  A   +G   ++NHGIP +++  +      FF L +E + KY +   T  ++ YG
Sbjct: 66  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 125

Query: 135 TSFNQNKDRVFCWRDF-LKLVCHPSQDVLVHWPSYPTDMRRLAVTYAKEIKNLFVMLMEA 193
           +    N      W D+   L     +  L  WP  P+D       YAK ++ L   + +A
Sbjct: 126 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 185

Query: 194 ILESLGLWGATMNMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTL 253
           +   LGL        + +EK +   ++   QM +N YP CP+P L LG+  H+D   LT 
Sbjct: 186 LSVGLGLE------PDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTF 239

Query: 254 LLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRIS 313
           +L + V GLQ+ Y+ KWV  + +  S V+++GD LEI SNGKY+S+LHR LVN  K RIS
Sbjct: 240 ILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRIS 299

Query: 314 VASLHSLPFNSMV-SPSPSLINKANPRRYKDTDFACFLEY 352
            A     P + +V  P P +++  +P ++    FA  +E+
Sbjct: 300 WAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEH 339
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query370
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 90.41
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 87.95
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.2e-80  Score=601.88  Aligned_cols=330  Identities=31%  Similarity=0.564  Sum_probs=287.1

Q ss_pred             ccccHHHHHHCCCCCCCCCCCCCCCCCCccccc--cccCCCCCCCceeeCCCCCC--C-ChHHHHHHHHHHHHHcCeEEE
Q 035868           17 YQKGVKNLCENGVTKVPKKYILPEFDRADEVLQ--VDLTMPNLKLPVIDFSELQG--P-NRSEVLKSLTSACEKYGFFQV   91 (370)
Q Consensus        17 ~~~~v~~l~~~~~~~vp~~y~~~~~~~~~~~~~--~~~~~~~~~iPvIDls~l~~--~-~~~~~~~~l~~A~~~~GfF~v   91 (370)
                      .+..||+|+++|+.+||++||+|++++|.+...  .....++.+||||||+.|.+  + .++.++++|.+||++||||||
T Consensus         2 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l   81 (349)
T d1gp6a_           2 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL   81 (349)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred             CCcchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEE
Confidence            356899999999999999999999998876321  11122446899999999873  2 467899999999999999999


Q ss_pred             EeCCCChHHHHHHHHHhhhhhCCCHHHHhhhccCCC-CCCeecccccCCCCCcccccccccccccCCCC-CccCCCCCCc
Q 035868           92 VNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDL-TAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQ-DVLVHWPSYP  169 (370)
Q Consensus        92 ~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~-~~~~Gy~~~~~~~~~~~~dw~e~~~~~~~p~~-~~~~~WP~~~  169 (370)
                      +||||+.++++++++++++||+||.|+|+++..... +.+.||+...........+|.+.+.....+.. ...+.||..+
T Consensus        82 ~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~  161 (349)
T d1gp6a_          82 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP  161 (349)
T ss_dssp             ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSS
T ss_pred             EccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhccccccccccccccccccc
Confidence            999999999999999999999999999999965433 33456665544445556777776554333332 3468999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHhcc---CCCcceEeeecCCCCCCCCccccCCcc
Q 035868          170 TDMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQ---DGSQQMVVNCYPPCPEPHLTLGMPPHS  246 (370)
Q Consensus       170 ~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~l~~~~~---~~~~~lr~~~YPp~~~~~~~~g~~~Ht  246 (370)
                      +.|++.+.+|+++|.+|+.+|+++++++||++++         +|.+.+.   ...+.||++|||||+.++..+|+++||
T Consensus       162 ~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~---------~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~Ht  232 (349)
T d1gp6a_         162 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPD---------RLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHT  232 (349)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT---------HHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEEC
T ss_pred             chHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHH---------HHHHHhccccccceeeeecccccccchhhccccccCC
Confidence            9999999999999999999999999999999999         8887763   345689999999999999999999999


Q ss_pred             ccCCeeEEeeCCCCCeeEEeCCeEEEecCCCCeEEEEeCcchhhhhCCccccccceeecCCCCCeEEEEEeecCCCCCee
Q 035868          247 DYGFLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLHSLPFNSMV  326 (370)
Q Consensus       247 D~g~lTlL~qd~v~GLqV~~~g~W~~V~p~pgalvVNvGD~Lq~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i  326 (370)
                      |+|+||||+|+.++||||+++|+|++|+|.+|++|||+||+||+||||+|||++|||+.+++++|||++||++|+.|++|
T Consensus       233 D~g~lTlL~q~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i  312 (349)
T d1gp6a_         233 DVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIV  312 (349)
T ss_dssp             CCSSEEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCE
T ss_pred             CCcceEEEeccCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCccee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999765


Q ss_pred             -eCCccccCCCCCCCCCCccHHHHHHHHHh
Q 035868          327 -SPSPSLINKANPRRYKDTDFACFLEYISS  355 (370)
Q Consensus       327 -~P~~~lv~~~~p~~y~~~~~~ey~~~~~~  355 (370)
                       +|+++||++++|++|++|||+||++.++.
T Consensus       313 ~~pl~~~v~~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         313 LKPLPEMVSVESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             ECCCGGGCCSSSCCSSCCEEHHHHHHHHHH
T ss_pred             ecCCHHHcCCCCCCCCCCccHHHHHHHHHh
Confidence             89999999999999999999999998664
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure