Citrus Sinensis ID: 035869

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------43
MEVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAGRYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNGYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFELGIFFPAVRDLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKAEVDDRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMELHNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCEELNKDEADVCTYTSCCRFPIYVDFGWGKPAWVSGIRMSFETVILLDNKEGNAIEAWVSLEEENMFHFLQDPYISRNCT
cEEEEEEEEEEcccccccccccccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHcccccccccEEcccccEEEEccccEEEEEEEEcccHHccccccccHHHHcccccccccccccccEEEEEEEEEcccEEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEEEEcHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHccccHHcccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccccEEEcccccccEEEEEEcccccEEEEEEEccHHHHHHHHccHHHHHccc
cEEEEEccEEcccccccccccccEEEcccHHcccccEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHccccccccccccEEEEccccEEEEEEEEccccHHHHcccccccHHHHHcccccccccccccEEEEEEEEEEcccEEEEEEEcccHccHHHHHHHHHHHHHHHcccccccccccccHHHccccccccccccccccccccccccEEEEEEEcHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccccccccccccccEEEEEcEEEccccccccHHHHHHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccEEEEEccccccEEEEccccccEEEcccccccccEEEEcccccccEEEEEEccHHHHHHHHHHHHHHHHcc
MEVQILSKklikpsiisipnhpkhmkvsfidqhappvympfifyypandnnnnkpqnIVTINLLQKSLSEILTLYyplagrydsenalvncnDEGVEFIEAKVDGQLSRILNGEFETDLLnkflpngyaesatspllatQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRlglnevsspsfelgiffpavrdlpnieAAAAPLKSGLKIVTKRFLFDGKAITKLKAEVDDRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLpmnlrgktvprvsencygnlykftnprfnadesnmELHNFVDLIgnafrnpsldsaktdefgdddfFSAVIDSYKEYCEELNKdeadvctytsccrfpiyvdfgwgkpawvsgIRMSFETVILLDNKEGNAIEAWVSLEEENMfhflqdpyisrnct
MEVQILSkklikpsiisipnhpKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAGRYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNGYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFELGIFFPAVRDLPNIEAAAAPLKSGLKIVTKRFLFDGKAItklkaevddrqvTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMELHNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCEELNKDEADVCTYTSCCRFPIYVDFGWGKPAWVSGIRMSFETVILLDNKEGNAIEAWVSLEEENmfhflqdpyisrnct
MEVQilskklikpsiisipNHPKHMKVSFIDQHAPPVYMPFIFYYPAndnnnnKPQNIVTINLLQKSLSEILTLYYPLAGRYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNGYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFELGIFFPAVRDLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKAEVDDRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMELHNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCEELNKDEADVCTYTSCCRFPIYVDFGWGKPAWVSGIRMSFETVILLDNKEGNAIEAWVSLEEENMFHFLQDPYISRNCT
*********LIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAGRYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNGYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFELGIFFPAVRDLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKAEVDDRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMELHNFVDLIGNAFRNPSL****TDEFGDDDFFSAVIDSYKEYCEELNKDEADVCTYTSCCRFPIYVDFGWGKPAWVSGIRMSFETVILLDNKEGNAIEAWVSLEEENMFHFLQDPYI*****
MEVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPAND**********TINLLQKSLSEILTLYYPLAGRYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNGYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFELGIFFPAVRDLPNI***********KIVTKRFLFDGKAITKLKAEVDDRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMELHNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCEELNKDEADVCTYTSCCRFPIYVDFGWGKPAWVSGIRMSFETVILLDNKEGNAIEAWVSLEEENMFHFLQDPYISRNCT
MEVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAGRYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNGYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFELGIFFPAVRDLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKAEVDDRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMELHNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCEELNKDEADVCTYTSCCRFPIYVDFGWGKPAWVSGIRMSFETVILLDNKEGNAIEAWVSLEEENMFHFLQDPYISRNCT
MEVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAGRYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNGYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFELGIFFPAVRDLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKAEVDDRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMELHNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCEELNKDEADVCTYTSCCRFPIYVDFGWGKPAWVSGIRMSFETVILLDNKEGNAIEAWVSLEEENMFHFLQDPYISRNCT
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MEVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAGRYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNGYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFELGIFFPAVRDLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKAEVDDRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMELHNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCEELNKDEADVCTYTSCCRFPIYVDFGWGKPAWVSGIRMSFETVILLDNKEGNAIEAWVSLEEENMFHFLQDPYISRNCT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query429 2.2.26 [Sep-21-2011]
Q70PR7421 Vinorine synthase OS=Rauv N/A no 0.902 0.919 0.348 2e-57
Q94FT4474 Salutaridinol 7-O-acetylt N/A no 0.941 0.852 0.308 6e-45
Q9FI40443 BAHD acyltransferase At5g no no 0.937 0.907 0.323 3e-42
Q9ZTK5439 Deacetylvindoline O-acety N/A no 0.934 0.913 0.297 3e-34
Q9FI78433 Shikimate O-hydroxycinnam no no 0.818 0.810 0.249 1e-21
Q8GSM7435 Shikimate O-hydroxycinnam N/A no 0.909 0.896 0.234 9e-21
Q94CD1457 Omega-hydroxypalmitate O- no no 0.801 0.752 0.241 8e-19
O24645445 Anthranilate N-benzoyltra N/A no 0.827 0.797 0.250 1e-17
O23918445 Anthranilate N-benzoyltra N/A no 0.839 0.808 0.241 1e-16
O23917446 Anthranilate N-benzoyltra N/A no 0.832 0.800 0.244 1e-16
>sp|Q70PR7|VINSY_RAUSE Vinorine synthase OS=Rauvolfia serpentina GN=ACT PE=1 SV=2 Back     alignment and function desciption
 Score =  223 bits (568), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/428 (34%), Positives = 236/428 (55%), Gaps = 41/428 (9%)

Query: 2   EVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVTI 61
           +++ +S++LI PS  + P   K  K+S +DQ     ++PFI +YP   ++N  P    T 
Sbjct: 4   QMEKVSEELILPSSPT-PQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQ--TS 60

Query: 62  NLLQKSLSEILTLYYPLAGRYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLN 121
             L++SLS++LT +YPLAGR +  N+ V+CND GV F+EA+V  QLS+ +    E + L+
Sbjct: 61  QHLKQSLSKVLTHFYPLAGRINV-NSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLD 119

Query: 122 KFLPN-----GYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSC 176
           ++LP+     G  E      LA +I+ F CGG AIG+ +SH+IAD  + +TF+NAW  +C
Sbjct: 120 QYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATC 179

Query: 177 RLGLNEVSSPSFELGI-FFPAVRDLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKAEV 235
           R G  E+  P+F+L    FP V + P+ E     L     +V KRF+FD + I  L+A+ 
Sbjct: 180 R-GETEIVLPNFDLAARHFPPVDNTPSPE-----LVPDENVVMKRFVFDKEKIGALRAQA 233

Query: 236 ----DDRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGN 291
               +++  +RVQ+V+A IWK  I   RAK G    F+++  +NLR +  P +     GN
Sbjct: 234 SSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGN 293

Query: 292 LYKFTNPRFNADESNMELHNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCE 351
           +        +A+       +F DLIG   R  SL+  KT++  + +    +   Y+   +
Sbjct: 294 IATLLFAAVDAEWDK----DFPDLIG-PLRT-SLE--KTEDDHNHELLKGMTCLYELEPQ 345

Query: 352 ELNKDEADVCTYTSCCRFPIY-VDFGWGKPAWVSGIRMSF---ETVILLDNKEGNAIEAW 407
           EL        ++TS CR   Y +DFGWGKP  +S    +F      +L+D + G+ +EAW
Sbjct: 346 EL-------LSFTSWCRLGFYDLDFGWGKP--LSACTTTFPKRNAALLMDTRSGDGVEAW 396

Query: 408 VSLEEENM 415
           + + E+ M
Sbjct: 397 LPMAEDEM 404
Acetyltransferase that catalyzes the formation of vinorine, a precursor of the antiarrhythmic monoterpenoid indole alkaloid ajmaline. Acts on gardneral, but not on polyneuridine aldehyde or N-methylgardneral.
Rauvolfia serpentina (taxid: 4060)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 6EC: 0
>sp|Q94FT4|SALAT_PAPSO Salutaridinol 7-O-acetyltransferase OS=Papaver somniferum GN=SALAT PE=1 SV=1 Back     alignment and function description
>sp|Q9FI40|BAHD1_ARATH BAHD acyltransferase At5g47980 OS=Arabidopsis thaliana GN=BAHD1 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZTK5|DAT_CATRO Deacetylvindoline O-acetyltransferase OS=Catharanthus roseus GN=DAT PE=1 SV=1 Back     alignment and function description
>sp|Q9FI78|HST_ARATH Shikimate O-hydroxycinnamoyltransferase OS=Arabidopsis thaliana GN=HST PE=2 SV=1 Back     alignment and function description
>sp|Q8GSM7|HST_TOBAC Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HST PE=1 SV=1 Back     alignment and function description
>sp|Q94CD1|HHT1_ARATH Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1 Back     alignment and function description
>sp|O24645|HCBT1_DIACA Anthranilate N-benzoyltransferase protein 1 OS=Dianthus caryophyllus GN=HCBT1 PE=1 SV=1 Back     alignment and function description
>sp|O23918|HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 OS=Dianthus caryophyllus GN=HCBT3 PE=1 SV=1 Back     alignment and function description
>sp|O23917|HCBT2_DIACA Anthranilate N-benzoyltransferase protein 2 OS=Dianthus caryophyllus GN=HCBT2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query429
224060435460 predicted protein [Populus trichocarpa] 0.981 0.915 0.461 1e-101
224134450431 predicted protein [Populus trichocarpa] 0.953 0.948 0.451 4e-92
224132744438 predicted protein [Populus trichocarpa] 0.969 0.949 0.423 2e-91
225466441436 PREDICTED: vinorine synthase-like [Vitis 0.955 0.940 0.434 2e-89
224126711440 predicted protein [Populus trichocarpa] 0.972 0.947 0.424 1e-88
224126889435 predicted protein [Populus trichocarpa] 0.960 0.947 0.444 2e-87
224078636433 predicted protein [Populus trichocarpa] 0.955 0.946 0.473 4e-87
224123764432 predicted protein [Populus trichocarpa] 0.960 0.953 0.464 5e-87
224089953439 predicted protein [Populus trichocarpa] 0.967 0.945 0.418 3e-85
224089949439 predicted protein [Populus trichocarpa] 0.967 0.945 0.414 5e-85
>gi|224060435|ref|XP_002300198.1| predicted protein [Populus trichocarpa] gi|222847456|gb|EEE85003.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/440 (46%), Positives = 266/440 (60%), Gaps = 19/440 (4%)

Query: 1   MEVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVT 60
           MEVQILS+K IKP     P H ++MKVS IDQ APP Y P I YY A +      +    
Sbjct: 1   MEVQILSEKFIKP-YSQTPLHLRNMKVSLIDQLAPPAYTPMILYYSAVNGEKTMSERDNR 59

Query: 61  INLLQKSLSEILTLYYPLAGRYDSENALVNCNDEGVEFIEAKVDGQLSRI-LNGEFETDL 119
            N L+KSLSE L  YYPLAGRY  +  +V+CND+G  F+EAKV G L+++ L G  +   
Sbjct: 60  FNRLEKSLSETLACYYPLAGRYIEDRNMVDCNDDGALFLEAKVSGHLAQLDLQGAVDVKS 119

Query: 120 LNKFLPNGYAESATSPL-LATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRL 178
           LN+F+P G  E A SP+ LA QIN F+CGGL IG+C+SHR+ADG     F+ AWA +CR 
Sbjct: 120 LNRFVPFG-DEMAFSPIVLAVQINKFDCGGLVIGVCISHRVADGHTMGAFLKAWATACRA 178

Query: 179 GLNEVSSPSFELGIFFPAVRDLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKAEVDD- 237
           G++E+  PSF+ G  FPA   L        P   G +IVTKRF+FDG+ I+ LKA+V   
Sbjct: 179 GMHEMIRPSFDAGALFPATDVLRF--GTPVPRDHGSQIVTKRFVFDGEKISSLKAKVMSY 236

Query: 238 -------RQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYG 290
                  R  +RV++V AL+WKA I   +AK G LR  LL LP+NLRGK    ++EN +G
Sbjct: 237 ARDSDVKRPPSRVEVVTALLWKALIGVAQAKHGKLRPSLLTLPLNLRGKVDLLITENSFG 296

Query: 291 NLYKFTNPRFNADESNMELHNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYC 350
           NLY+    RFN  ES+ E+H+ V L+ +A    + D  +      DD  + V +S +E  
Sbjct: 297 NLYRMVGVRFNPKESSSEMHHLVSLLNDAVNKANKDCEQV--VNSDDVIAMVSNSMEEIH 354

Query: 351 EELNKDEADVCTYTSCCRFPIY-VDFGWGKPAWVSGIRMSFETVILLDNKEGNAIEAWVS 409
                 + D+C   S C+FP Y +DFG+GKP W S +    E V+L+D K G  IEAWVS
Sbjct: 355 NGARNGDLDICVVPSWCKFPFYQIDFGFGKPTWFSSVHKPLEIVLLVDTKFGTGIEAWVS 414

Query: 410 LEEENMFHFLQDPYISRNCT 429
           LE ENM  F Q  YIS+ C+
Sbjct: 415 LEVENMLQFQQ--YISQQCS 432

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224134450|ref|XP_002321827.1| predicted protein [Populus trichocarpa] gi|222868823|gb|EEF05954.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224132744|ref|XP_002327870.1| predicted protein [Populus trichocarpa] gi|222837279|gb|EEE75658.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225466441|ref|XP_002266054.1| PREDICTED: vinorine synthase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224126711|ref|XP_002329454.1| predicted protein [Populus trichocarpa] gi|222870134|gb|EEF07265.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224126889|ref|XP_002329498.1| predicted protein [Populus trichocarpa] gi|222870178|gb|EEF07309.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224078636|ref|XP_002305585.1| predicted protein [Populus trichocarpa] gi|222848549|gb|EEE86096.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224123764|ref|XP_002330202.1| predicted protein [Populus trichocarpa] gi|222871658|gb|EEF08789.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224089953|ref|XP_002308879.1| predicted protein [Populus trichocarpa] gi|222854855|gb|EEE92402.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224089949|ref|XP_002308878.1| predicted protein [Populus trichocarpa] gi|222854854|gb|EEE92401.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query429
TAIR|locus:2024036435 AT1G24430 [Arabidopsis thalian 0.916 0.903 0.348 1.8e-62
TAIR|locus:2092090442 AT3G26040 [Arabidopsis thalian 0.916 0.889 0.342 7e-54
TAIR|locus:2152783426 AT5G47950 [Arabidopsis thalian 0.853 0.859 0.356 1.4e-48
TAIR|locus:2024061436 AT1G24420 [Arabidopsis thalian 0.895 0.880 0.354 3.7e-48
TAIR|locus:2102936443 AT3G30280 [Arabidopsis thalian 0.902 0.873 0.317 9.1e-45
TAIR|locus:2130065446 AT4G15390 [Arabidopsis thalian 0.899 0.865 0.330 3.1e-44
TAIR|locus:2178667428 AT5G23970 [Arabidopsis thalian 0.883 0.885 0.323 5.7e-43
TAIR|locus:2152763443 AT5G47980 [Arabidopsis thalian 0.899 0.871 0.338 1.4e-41
TAIR|locus:2130075435 BIA1 "BRASSINOSTEROID INACTIVA 0.888 0.875 0.312 7e-38
TAIR|locus:2114510430 DCF "DEFICIENT IN CUTIN FERULA 0.804 0.802 0.267 1.3e-22
TAIR|locus:2024036 AT1G24430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 147/422 (34%), Positives = 232/422 (54%)

Query:    20 NHPK-HMKVSFIDQHAPPVYMPFIFYYPAXXXXXXKPQNIVTINLLQKSLSEILTLYYPL 78
             NHP  H  +SF+DQ APP++MPF+F+Y        K ++    + ++ SLSEIL LYYPL
Sbjct:    21 NHPPCHHHLSFLDQLAPPIFMPFLFFYHNKTNLSDKERS----DHIKSSLSEILNLYYPL 76

Query:    79 AGRYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNGYAESATSPLLA 138
             AGR  +   +V CND GV F+EAK D  +S+IL      +L NK  P  + E +  PL  
Sbjct:    77 AGRIKNSGDVVVCNDVGVSFVEAKADCNMSQILENPNPNEL-NKLHPFEFHEVSDVPL-T 134

Query:   139 TQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFELGIFFPAVR 198
              Q+  F CGGLA+GI +SH++ D  +   F+N+WA   R   +E+ +PSF+L   FP   
Sbjct:   135 VQLTFFECGGLALGIGLSHKLCDALSGLIFVNSWAAFARGQTDEIITPSFDLAKMFPPC- 193

Query:   199 DLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKAEVDDRQ---VTRVQMVIALIWKAHI 255
             D+ N+  A    K    IVT+RF+F   ++  L+      +    TRV+++   IW   +
Sbjct:   194 DIENLNMATGITKEN--IVTRRFVFLRSSVESLRERFSGNKKIRATRVEVLSVFIWSRFM 251

Query:   256 SALRA--KRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKF--TNPRFNADESNMELHN 311
             ++     K G +  + L+ P+NLR +  P + +N +GN+ +F  T P    +E++ E  +
Sbjct:   252 ASTNHDDKTGKI--YTLIHPVNLRRQADPDIPDNMFGNIMRFSVTVPMMIINENDEEKAS 309

Query:   312 FVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCEELNKDEADVCTYTSCCRFPI 371
              VD +    R   +D+    +  +D+     ++   +        E    ++TS C+FP+
Sbjct:   310 LVDQMREEIRK--IDAVYVKKLQEDN--RGHLEFLNKQASGFVNGEIVSFSFTSLCKFPV 365

Query:   372 Y-VDFGWGKPAWVSGIRMSFETVI-LLDNKEGNAIEAWVSLEEENMFHFLQDP----YIS 425
             Y  DFGWGKP WV+  RMS++ ++  +D KEG+ IEAW++L++ +M  F  D     Y+S
Sbjct:   366 YEADFGWGKPLWVASARMSYKNLVAFIDTKEGDGIEAWINLDQNDMSRFEADEELLRYVS 425

Query:   426 RN 427
              N
Sbjct:   426 SN 427
GO:0005737 "cytoplasm" evidence=ISM
GO:0016740 "transferase activity" evidence=ISS
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
TAIR|locus:2092090 AT3G26040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152783 AT5G47950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024061 AT1G24420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102936 AT3G30280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130065 AT4G15390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178667 AT5G23970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152763 AT5G47980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130075 BIA1 "BRASSINOSTEROID INACTIVATOR1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2114510 DCF "DEFICIENT IN CUTIN FERULATE" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.766
3rd Layer2.3.1.188LOW CONFIDENCE prediction!
3rd Layer2.3.1.144LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query429
PLN00140444 PLN00140, PLN00140, alcohol acetyltransferase fami 6e-90
pfam02458432 pfam02458, Transferase, Transferase family 9e-88
PLN02481436 PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul 1e-29
PLN02663431 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate 3e-23
PLN03157447 PLN03157, PLN03157, spermidine hydroxycinnamoyl tr 8e-20
>gnl|CDD|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional Back     alignment and domain information 
 Score =  279 bits (715), Expect = 6e-90
 Identities = 148/443 (33%), Positives = 232/443 (52%), Gaps = 35/443 (7%)

Query: 1   MEVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVT 60
           MEV I+S++LIKPS  SI +H K  K+S +DQ  P  Y+P IF+YP N+N N K   I  
Sbjct: 1   MEVSIISRELIKPSSPSI-HHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNFKGLQISI 59

Query: 61  INLLQKSLSEILTLYYPLAGRYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLL 120
              L++SLSE L+ +YP +GR   +N +++  +EGV F E +V G LS  L    + +LL
Sbjct: 60  --QLKRSLSETLSTFYPFSGRV-KDNLIIDNYEEGVPFFETRVKGSLSDFLK-HPQLELL 115

Query: 121 NKFLPN---GY-AESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSC 176
           NKFLP     Y ++    P +A Q+N F+CGG+A+G+C SH+I D    S F+++WA + 
Sbjct: 116 NKFLPCQPFSYESDPEAIPQVAIQVNTFDCGGIALGLCFSHKIIDAATASAFLDSWAANT 175

Query: 177 RLGLNEVSSPS-FELGIFFPAVRDLPN--IEAAAAPLKSGLKIVTKRFLFDGKAITKLKA 233
           R   +EV +P  FE   FFP +   P   +             +TKRF+FD KAI  L+A
Sbjct: 176 RGHYSEVINPDLFEASSFFPPLNSFPVQFLLLMEENWFFKENYITKRFVFDAKAIATLRA 235

Query: 234 EVDDRQV---TRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYG 290
           +   ++V   +R++ +   IWK   +A R+     R  + +  +N+R +T P +S    G
Sbjct: 236 KAKSKRVPNPSRIETLSCFIWKCCTAASRSISAAPRPSISVHAVNIRQRTKPPMSRYSIG 295

Query: 291 NLYKFTNPRFNADESNMELHNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYC 350
           NL+ +     +  ++ +EL+  V L   +  N   +S        ++    +     EY 
Sbjct: 296 NLFWWALAAADPADTKIELNELVSLTRESIAN--YNSDYLKSLQGENGLEGM----SEYL 349

Query: 351 EELN---KDEADVCTYTSCCRFPIY-VDFGWGKPAWV-------SGIRMSFETVILLDNK 399
            +L     +E ++  ++S   F +  VDFGWGKP WV          R      +  +  
Sbjct: 350 NQLVGIFSEEPEIFLFSSWLNFGLNDVDFGWGKPIWVGLLGEVGPAFR---NLTVFKETG 406

Query: 400 EGNAIEAWVSLEEENMFHFLQDP 422
           + N IEAW++L+E+ M    +DP
Sbjct: 407 DNNGIEAWITLDEKIMAILERDP 429

Length = 444
>gnl|CDD|217048 pfam02458, Transferase, Transferase family Back     alignment and domain information
>gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase Back     alignment and domain information
>gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase Back     alignment and domain information
>gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 429
PLN00140444 alcohol acetyltransferase family protein; Provisio 100.0
PLN03157447 spermidine hydroxycinnamoyl transferase; Provision 100.0
PLN02663431 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn 100.0
PLN02481436 Omega-hydroxypalmitate O-feruloyl transferase 100.0
PF02458432 Transferase: Transferase family; InterPro: IPR0034 100.0
PRK09294416 acyltransferase PapA5; Provisional 99.35
PF07247480 AATase: Alcohol acetyltransferase; InterPro: IPR01 98.76
COG4908439 Uncharacterized protein containing a NRPS condensa 98.6
TIGR02946446 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b 98.34
PF00668301 Condensation: Condensation domain; InterPro: IPR00 98.07
PRK12467 3956 peptide synthase; Provisional 97.57
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 97.51
PRK12467 3956 peptide synthase; Provisional 97.38
PRK12316 5163 peptide synthase; Provisional 97.31
PRK12316 5163 peptide synthase; Provisional 97.16
PRK05691 4334 peptide synthase; Validated 97.07
PRK05691 4334 peptide synthase; Validated 96.81
PF03007263 WES_acyltransf: Wax ester synthase-like Acyl-CoA a 94.75
PF07428413 Tri3: 15-O-acetyltransferase Tri3; InterPro: IPR00 86.15
>PLN00140 alcohol acetyltransferase family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.8e-80  Score=627.27  Aligned_cols=420  Identities=33%  Similarity=0.596  Sum_probs=342.6

Q ss_pred             CeEEEEeeeeecCCCCCCCCCCccccCCcCcCCCCCCCccEEEEecCCCCCCCCCCchHHHHHHHHHHHHHhhhccCCCC
Q 035869            1 MEVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAG   80 (429)
Q Consensus         1 ~~v~~~~~~~V~P~~~p~~~~~~~~~Ls~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaG   80 (429)
                      |+|+++++++|+|+. |||.+.+.++||.|||.+++.|++.+|||+.+...+  .+....+++||+||+++|++||||||
T Consensus         1 ~~v~~~s~~~V~Ps~-ptp~~~~~~~LS~lD~~~~~~~~~~~~fY~~~~~~~--~~~~~~~~~Lk~sLs~~L~~fyplAG   77 (444)
T PLN00140          1 MEVSIISRELIKPSS-PSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQN--FKGLQISIQLKRSLSETLSTFYPFSG   77 (444)
T ss_pred             CeeEEeccceeccCC-CCccccccCCCChHHhcccccccceEEEeeCCCccc--ccchhHHHHHHHHHHHHHhhhhccCc
Confidence            899999999999999 999877789999999988899999999999754210  12236789999999999999999999


Q ss_pred             cccCCCcEEEeCCCCceEEEEEEcCchhhhhCCCCCcccccccccccc----CCCCCCCeEEEEEEEEcCCeEEEEeeec
Q 035869           81 RYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNGY----AESATSPLLATQINMFNCGGLAIGICMS  156 (429)
Q Consensus        81 rvv~~~~~i~~~~~gv~f~~a~~~~~l~~l~~~~p~~~~~~~l~p~~~----~~~~~~Pll~vQvt~~~cgGl~l~~~~~  156 (429)
                      | ++.+++|+||++||.|+||+++.+++|+.. .++...+++|+|...    .+..+.|++.||||+|+|||++||+++|
T Consensus        78 R-l~~~~~i~cn~~Gv~fveA~~~~~l~d~l~-~~~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvT~F~cGG~~lG~~~~  155 (444)
T PLN00140         78 R-VKDNLIIDNYEEGVPFFETRVKGSLSDFLK-HPQLELLNKFLPCQPFSYESDPEAIPQVAIQVNTFDCGGIALGLCFS  155 (444)
T ss_pred             c-ccCCceeEccCCCceEEEEEecCcHHHhcC-CCCHHHHHhhCCCCcccccCCccCCceEEEEEEEeccCcEEEEeeec
Confidence            9 777899999999999999999999999865 565556678887641    1234579999999999999999999999


Q ss_pred             eeeechhhHHHHHHHHHHHhhCCCCC-CCCCccccc-ccCCCCCCCCC-c-ccccCCCCCCCCeEEEEEEEcHHHHHHHH
Q 035869          157 HRIADGFAFSTFINAWAKSCRLGLNE-VSSPSFELG-IFFPAVRDLPN-I-EAAAAPLKSGLKIVTKRFLFDGKAITKLK  232 (429)
Q Consensus       157 H~v~Dg~~~~~fl~~wa~~~r~G~~~-~~~P~~~r~-~l~~~~~~~p~-~-~~~~~~~~~~~~~~~~~~~~~~~~l~~Lk  232 (429)
                      |.++||.|+.+|+++||++|| |... ...|.++|. .+.|++.+++. . ......+....+++.++|+|++++|++||
T Consensus       156 H~v~Dg~s~~~Fl~~WA~~~r-g~~~~~~~P~~dr~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~~f~fs~~~I~~LK  234 (444)
T PLN00140        156 HKIIDAATASAFLDSWAANTR-GHYSEVINPDLFEASSFFPPLNSFPVQFLLLMEENWFFKENYITKRFVFDAKAIATLR  234 (444)
T ss_pred             eEcccHHHHHHHHHHHHHHhc-CCCCCCCCcccccccccCCCCCcccccccccccccccccCceEEEEEEECHHHHHHHH
Confidence            999999999999999999999 8754 467999986 34555422221 0 00001222345788999999999999999


Q ss_pred             HHcc---CCCCCchhhHHHHHHHHHHHHhhhccCCCcceEEEEEeecCCCCCCCCCCCcccccccccccccccccccccH
Q 035869          233 AEVD---DRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMEL  309 (429)
Q Consensus       233 ~~~~---~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~~~~~l  309 (429)
                      +.+.   ..++|++|+|+|++|+|+++|+....+.++.+.+.++||+|+|++||+|.+||||++..+.+..+.++...+|
T Consensus       235 ~~~~~~~~~~~S~~e~vsA~iWr~~~rA~~~~~~~~~~~~~~~~vn~R~Rl~PpLP~~y~GN~i~~~~~~~~~~~~~~~l  314 (444)
T PLN00140        235 AKAKSKRVPNPSRIETLSCFIWKCCTAASRSISAAPRPSISVHAVNIRQRTKPPMSRYSIGNLFWWALAAADPADTKIEL  314 (444)
T ss_pred             HhcccccCCCCchhHHHHHHHHHHHHHHhhhccCCCCceEEEEEEeccccCCCCCCcccccchhhhheecccccccccch
Confidence            9987   2579999999999999999996543222367899999999999999999999999999998887776656889


Q ss_pred             HHHHHHHHHHhhcCCccccccccCCCchhhHHHHHHHHHHhhhhccCCCCeEEEeccCCCCcc-ccccccccceeeccc-
Q 035869          310 HNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCEELNKDEADVCTYTSCCRFPIY-VDFGWGKPAWVSGIR-  387 (429)
Q Consensus       310 ~~~A~~iR~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsw~~~~~~-~DFG~G~p~~v~~~~-  387 (429)
                      +++|..||++++++|++|++  ++++...+. .+.++++..+.......+.+.+|||+||++| +|||||+|+++++.. 
T Consensus       315 ~~~a~~Ir~~i~~~~~e~~~--s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vssw~r~~~ye~DFGwGkP~~v~~~~~  391 (444)
T PLN00140        315 NELVSLTRESIANYNSDYLK--SLQGENGLE-GMSEYLNQLVGIFSEEPEIFLFSSWLNFGLNDVDFGWGKPIWVGLLGE  391 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHH--HhccchhHH-HHHHHHHHHhhcccCCCceEEecccccCCccccccCCCCceeeecccc
Confidence            99999999999999999999  776532211 1112333222211123454689999999999 999999999998873 


Q ss_pred             ---ccccEEEEeecCCCCeEEEEEECCHHHHHhhhcChhhhhccC
Q 035869          388 ---MSFETVILLDNKEGNAIEAWVSLEEENMFHFLQDPYISRNCT  429 (429)
Q Consensus       388 ---~~~g~~~i~p~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~~  429 (429)
                         +.+|+++++|+++++|+||+|+|++++|++|++|+||++|++
T Consensus       392 ~~~~~~~~~~l~~~~~~~giev~v~L~~~~M~~f~~d~e~l~~~~  436 (444)
T PLN00140        392 VGPAFRNLTVFKETGDNNGIEAWITLDEKIMAILERDPEFLAFAT  436 (444)
T ss_pred             cCCcccceEEEEecCCCCeEEEEEecCHHHHHHHhhCHHHHhhcC
Confidence               457899999998888999999999999999999999999985

>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional Back     alignment and domain information
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase Back     alignment and domain information
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase Back     alignment and domain information
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes Back     alignment and domain information
>PRK09294 acyltransferase PapA5; Provisional Back     alignment and domain information
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 Back     alignment and domain information
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] Back     alignment and domain information
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT Back     alignment and domain information
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins Back     alignment and domain information
>PF07428 Tri3: 15-O-acetyltransferase Tri3; InterPro: IPR009992 This family represents a conserved region approximately 400 residues long within 15-O-acetyltransferase (Tri3), which seems to be restricted to ascomycete fungi Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query429
2bgh_A421 Crystal Structure Of Vinorine Synthase Length = 421 2e-56
4g0b_A436 Structure Of Native Hct From Coffea Canephora Lengt 2e-21
4g2m_A439 Structure Of A Lys-Hct Mutant From Coffea Canephora 7e-21
4g22_A439 Structure Of A Lys-Hct Mutant From Coffea Canephora 1e-19
2e1t_A454 Crystal Structure Of Dendranthema Morifolium Dmat C 2e-05
2e1v_A454 Crystal Structure Of Dendranthema Morifolium Dmat, 2e-05
>pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase Length = 421 Back     alignment and structure 
Iteration: 1

 Score =  216 bits (550), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/407 (34%), Positives = 220/407 (54%), Gaps = 40/407 (9%)
Query: 23  KHMKVSFIDQHAPPVYMPFIFYYPAXXXXXXKPQNIVTINLLQKSLSEILTLYYPLAGRY 82
           K  K+S +DQ     ++PFI +YP        P    T   L++SLS++LT +YPLAGR 
Sbjct: 24  KCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQ--TSQHLKQSLSKVLTHFYPLAGRI 81
Query: 83  DSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPN-----GYAESATSPLL 137
           +  N+ V+CND GV F+EA+V  QLS+ +    E + L+++LP+     G  E      L
Sbjct: 82  NV-NSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPL 140
Query: 138 ATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFELGI-FFPA 196
           A +I+ F CGG AIG+ +SH+IAD  + +TF+NAW  +CR G  E+  P+F+L    FP 
Sbjct: 141 AVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCR-GETEIVLPNFDLAARHFPP 199
Query: 197 VRDLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKAEV----DDRQVTRVQMVIALIWK 252
           V + P+ E     L     +V KRF+FD + I  L+A+     +++  +RVQ+V+A IWK
Sbjct: 200 VDNTPSPE-----LVPDENVVMKRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWK 254
Query: 253 AHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMELHNF 312
             I   RAK G    F+++  +NLR +  P +     GN+        +A+       +F
Sbjct: 255 HVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEWDK----DF 310
Query: 313 VDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCEELNKDEADVCTYTSCCRFPIY 372
            DLIG   R  SL+  KT++  + +    +   Y+   +EL        ++TS CR   Y
Sbjct: 311 PDLIG-PLRT-SLE--KTEDDHNHELLKGMTCLYELEPQEL-------LSFTSWCRLGFY 359
Query: 373 -VDFGWGKPAWVSGIRMSF---ETVILLDNKEGNAIEAWVSLEEENM 415
            +DFGWGKP  +S    +F      +L+D + G+ +EAW+ + E+ M
Sbjct: 360 DLDFGWGKP--LSACTTTFPKRNAALLMDTRSGDGVEAWLPMAEDEM 404
>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436 Back     alignment and structure
>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439 Back     alignment and structure
>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439 Back     alignment and structure
>pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat Complexed With Malonyl-coa Length = 454 Back     alignment and structure
>pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno- Methionine Derivative Length = 454 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query429
2bgh_A421 Vinorine synthase; VS, BAHD, acetyltransferase, au 1e-109
4g22_A439 Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn 1e-100
2e1v_A454 Acyl transferase; BAHD superfamily, seleno-methion 7e-85
2xr7_A453 Malonyltransferase; xenobiotics, naphthols; HET: M 4e-80
2rkv_A451 Trichothecene 3-O-acetyltransferase; BAHD superfam 2e-60
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 Back     alignment and structure
 Score =  328 bits (842), Expect = e-109
 Identities = 135/435 (31%), Positives = 221/435 (50%), Gaps = 37/435 (8%)

Query: 1   MEVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVT 60
            +++ +S++LI PS    P   K  K+S +DQ     ++PFI +YP   ++N  P     
Sbjct: 3   PQMEKVSEELILPSS-PTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTS- 60

Query: 61  INLLQKSLSEILTLYYPLAGRYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLL 120
              L++SLS++LT +YPLAGR  + N+ V+CND GV F+EA+V  QLS+ +    E + L
Sbjct: 61  -QHLKQSLSKVLTHFYPLAGRI-NVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKL 118

Query: 121 NKFLP-----NGYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKS 175
           +++LP      G  E      LA +I+ F CGG AIG+ +SH+IAD  + +TF+NAW  +
Sbjct: 119 DQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTAT 178

Query: 176 CRLGLNEVSSPSFELG-IFFPAVRDLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKAE 234
           CR G  E+  P+F+L    FP V + P+ E           +V KRF+FD + I  L+A+
Sbjct: 179 CR-GETEIVLPNFDLAARHFPPVDNTPSPELVPDE-----NVVMKRFVFDKEKIGALRAQ 232

Query: 235 V----DDRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYG 290
                +++  +RVQ+V+A IWK  I   RAK G    F+++  +NLR +  P +     G
Sbjct: 233 ASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMG 292

Query: 291 NLYKFTNPRFNADESNMELHNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYC 350
           N+        +A+    +  + +  +  +               +DD    ++       
Sbjct: 293 NIATLLFAAVDAEWDK-DFPDLIGPLRTSLEK-----------TEDDHNHELLKGMTCLY 340

Query: 351 EELNKDEADVCTYTSCCRFPIY-VDFGWGKPAWVSGIRMSFE-TVILLDNKEGNAIEAWV 408
           E    +  ++ ++TS CR   Y +DFGWGKP              +L+D + G+ +EAW+
Sbjct: 341 E---LEPQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRSGDGVEAWL 397

Query: 409 SLEEENMFHFLQDPY 423
            + E+ M     +  
Sbjct: 398 PMAEDEMAMLPVELL 412
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 Back     alignment and structure
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 Back     alignment and structure
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 Back     alignment and structure
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query429
2bgh_A421 Vinorine synthase; VS, BAHD, acetyltransferase, au 100.0
4g22_A439 Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn 100.0
2xr7_A453 Malonyltransferase; xenobiotics, naphthols; HET: M 100.0
2e1v_A454 Acyl transferase; BAHD superfamily, seleno-methion 100.0
2rkv_A451 Trichothecene 3-O-acetyltransferase; BAHD superfam 100.0
1q9j_A422 PAPA5, polyketide synthase associated protein 5; c 98.85
2jgp_A520 Tyrocidine synthetase 3; multifunctional enzyme, a 98.5
4hvm_A493 Tlmii; PSI-biology, midwest center for structural 98.46
1l5a_A436 Amide synthase, VIBH; nonribosomal peptide synthet 98.42
2xhg_A466 Tyrocidine synthetase A; isomerase, nonribosomal p 98.25
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 98.16
3fot_A519 15-O-acetyltransferase; fusarium head blight, tric 97.63
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Back     alignment and structure
Probab=100.00  E-value=1.9e-77  Score=604.38  Aligned_cols=401  Identities=33%  Similarity=0.609  Sum_probs=339.6

Q ss_pred             CeEEEEeeeeecCCCCCCCCCCccccCCcCcCCCCCCCccEEEEecCCCCCCCCCCchHHHHHHHHHHHHHhhhccCCCC
Q 035869            1 MEVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAG   80 (429)
Q Consensus         1 ~~v~~~~~~~V~P~~~p~~~~~~~~~Ls~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaG   80 (429)
                      |+|+++++++|+|+. |+|.+.+.++||+||+..++.|++.+|||+.++..+  .+....+++||+||+++|++||+|||
T Consensus         3 m~v~v~~~~~V~P~~-ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~--~~~~~~~~~Lk~sLs~~L~~~~plAG   79 (421)
T 2bgh_A            3 PQMEKVSEELILPSS-PTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSN--LDPAQTSQHLKQSLSKVLTHFYPLAG   79 (421)
T ss_dssp             -CEEEEEEEEEECSS-CCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCC--CCHHHHHHHHHHHHHHHTTTSGGGGS
T ss_pred             ceEEEeeeEEEeCCC-CCCCCCcccCCChHHhcccccccceEEEEeCCCccc--cchhhHHHHHHHHHHHHhhhcchhcc
Confidence            689999999999999 998766789999999987789999999999754310  13457899999999999999999999


Q ss_pred             cccCCCcEEEeCCCCceEEEEEEcCchhhhhCCCCCcccccccccccc-CC----CCCCCeEEEEEEEEcCCeEEEEeee
Q 035869           81 RYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNGY-AE----SATSPLLATQINMFNCGGLAIGICM  155 (429)
Q Consensus        81 rvv~~~~~i~~~~~gv~f~~a~~~~~l~~l~~~~p~~~~~~~l~p~~~-~~----~~~~Pll~vQvt~~~cgGl~l~~~~  155 (429)
                      | ++++++|+||++||.|++++++.+++++....|+...+++|+|... .+    ..+.|++.+|||+|+|||++||+++
T Consensus        80 R-l~~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~  158 (421)
T 2bgh_A           80 R-INVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNL  158 (421)
T ss_dssp             E-EETTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEE
T ss_pred             c-cCCCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEEEe
Confidence            9 6678999999999999999999999999763366556778887651 11    4568999999999999999999999


Q ss_pred             ceeeechhhHHHHHHHHHHHhhCCCCCCCCCcccc-cccCCC-CCCCCCcccccCCCCCCCCeEEEEEEEcHHHHHHHHH
Q 035869          156 SHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFEL-GIFFPA-VRDLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKA  233 (429)
Q Consensus       156 ~H~v~Dg~~~~~fl~~wa~~~r~G~~~~~~P~~~r-~~l~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~  233 (429)
                      ||.++||.|+.+|+++||+++| |......|.++| ..+.++ + +.|.   |  .+....++..++|+|++++|++||+
T Consensus       159 ~H~v~Dg~~~~~fl~~wa~~~r-g~~~~~~P~~dr~~~l~p~~~-~~~~---~--~~~~~~~~~~~~f~f~~~~i~~LK~  231 (421)
T 2bgh_A          159 SHKIADVLSLATFLNAWTATCR-GETEIVLPNFDLAARHFPPVD-NTPS---P--ELVPDENVVMKRFVFDKEKIGALRA  231 (421)
T ss_dssp             ETTTCCHHHHHHHHHHHHHHHT-TCSCCCCCBCSHHHHHSCCCT-TCCC---C--CCCCCSSEEEEEEEECHHHHHHHHH
T ss_pred             eEEechHHHHHHHHHHHHHHhc-CCCCCCCCccccccccCCCcc-cCCC---C--ccCCccceEEEEEEECHHHHHHHHH
Confidence            9999999999999999999999 875446789999 766665 4 4443   1  2223567899999999999999999


Q ss_pred             Hcc----CCCCCchhhHHHHHHHHHHHHhhhccCCCcceEEEEEeecCCCCCCCCCCCcccccccccccccccccccccH
Q 035869          234 EVD----DRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMEL  309 (429)
Q Consensus       234 ~~~----~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~~~~~l  309 (429)
                      ++.    ..++|+||+|+|++|+|+++||....+.++++.+.++||+|+|++||+|.+||||++..+.+..++++ +.+|
T Consensus       232 ~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~-~~~l  310 (421)
T 2bgh_A          232 QASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEW-DKDF  310 (421)
T ss_dssp             HTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTC-CCCG
T ss_pred             HhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEEEEEecccc-cccH
Confidence            987    15799999999999999999997643334689999999999999999999999999999988888775 7889


Q ss_pred             HHHHHHHHHHhhcCCccccccccCCCchhhHHHHHHHHHHhhhhccCCCCeEEEeccCCCCcc-ccccccccceeeccc-
Q 035869          310 HNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCEELNKDEADVCTYTSCCRFPIY-VDFGWGKPAWVSGIR-  387 (429)
Q Consensus       310 ~~~A~~iR~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsw~~~~~~-~DFG~G~p~~v~~~~-  387 (429)
                      +++|..||++++++++++++  ++          .++.+.....  .+.+.+++|||+++++| +|||||+|+++++.. 
T Consensus       311 ~~~a~~ir~ai~~~~~~~~~--~~----------~~~~~~~~~~--~~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~  376 (421)
T 2bgh_A          311 PDLIGPLRTSLEKTEDDHNH--EL----------LKGMTCLYEL--EPQELLSFTSWCRLGFYDLDFGWGKPLSACTTTF  376 (421)
T ss_dssp             GGGHHHHHHHTCCCSSCHHH--HH----------HHHHHHHHTS--CGGGEEEEEEETTSCGGGCCSSSCCCSEEECCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHH--HH----------HHHHHHhhcc--CCCCeEEEeccccCCCcccccCCCccCeeccccc
Confidence            99999999999999988877  32          1233322111  22356999999999999 999999999999877 


Q ss_pred             ccccEEEEeecCCCCeEEEEEECCHHHHHhhhcChhhhhccC
Q 035869          388 MSFETVILLDNKEGNAIEAWVSLEEENMFHFLQDPYISRNCT  429 (429)
Q Consensus       388 ~~~g~~~i~p~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~~  429 (429)
                      +.+|+++++|+++++|++|.|+|++++|++|++  ||.+|++
T Consensus       377 ~~~g~~~~~p~~~~~gi~v~v~L~~~~m~~f~~--e~~~~~~  416 (421)
T 2bgh_A          377 PKRNAALLMDTRSGDGVEAWLPMAEDEMAMLPV--ELLSLVD  416 (421)
T ss_dssp             CSTTEEEEEECTTSSSEEEEEEEEHHHHHHSCH--HHHTTBC
T ss_pred             CcCCEEEEEecCCCCeEEEEEEcCHHHHHHHHH--HHHHhhc
Confidence            678999999999888999999999999999998  9999985
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Back     alignment and structure
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Back     alignment and structure
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Back     alignment and structure
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Back     alignment and structure
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} Back     alignment and structure
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} Back     alignment and structure
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query429
d1q9ja1175 Polyketide synthase associated protein 5, PapA5 {M 97.4
d1l5aa1174 VibH {Vibrio cholerae [TaxId: 666]} 97.34
d1q9ja2238 Polyketide synthase associated protein 5, PapA5 {M 97.22
d1l5aa2250 VibH {Vibrio cholerae [TaxId: 666]} 80.56
>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: NRPS condensation domain (amide synthase)
domain: Polyketide synthase associated protein 5, PapA5
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.40  E-value=0.00036  Score=58.19  Aligned_cols=133  Identities=15%  Similarity=0.165  Sum_probs=74.4

Q ss_pred             ccCCcCcCCCC--CCCccEEEEecCCCCCCCCCCchHHHHHHHHHHHHHhhhccCCCCcccC--CCcEEEeCCCCceEEE
Q 035869           25 MKVSFIDQHAP--PVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAGRYDS--ENALVNCNDEGVEFIE  100 (429)
Q Consensus        25 ~~Ls~lD~~~~--~~y~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrvv~--~~~~i~~~~~gv~f~~  100 (429)
                      -+|+..++...  ..++...+-.+..-          ..+.|++++..+++.+|.|-.+++.  |........+......
T Consensus         8 r~l~~~e~~~~~~~~~~~~~~~l~g~l----------d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~~~~~~~~~~~~~   77 (175)
T d1q9ja1           8 RKLSHSEEVFAQYEVFTSMTIQLRGVI----------DVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGI   77 (175)
T ss_dssp             EECCHHHHHHHHTTCEEEEEEEEESCC----------CHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCC
T ss_pred             HHhCHHhhhcccCceEEEEEEEEcCCC----------CHHHHHHHHHHHHHhchhheEEEEEeCCeeEEEEECCCCCccE
Confidence            34677776542  34455555555443          4899999999999999999988443  1221111111111100


Q ss_pred             EEEcCchhhhhCCCCCccccccccccccCCCCCCCeEEEEEEEEcCCeEEEEeeeceeeechhhHHHHHHHHHHHhh
Q 035869          101 AKVDGQLSRILNGEFETDLLNKFLPNGYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCR  177 (429)
Q Consensus       101 a~~~~~l~~l~~~~p~~~~~~~l~p~~~~~~~~~Pll~vQvt~~~cgGl~l~~~~~H~v~Dg~~~~~fl~~wa~~~r  177 (429)
                      ...+.+  +...     .....-.+..  ...+.|+..+.+..-. ++..|.+.+||.++||.|+..|++.+.+.+.
T Consensus        78 ~~~d~~--~~~~-----~~~~~~~~~~--l~~~~~l~~~~i~~~~-~~~~l~l~~HH~i~Dg~S~~~ll~el~~~Y~  144 (175)
T d1q9ja1          78 CVIDGT--AATN-----GSPSGNAELR--LDQSVSLLHLQLILRE-GGAELTLYLHHCMADGHHGAVLVDELFSRYT  144 (175)
T ss_dssp             EEEC-------------------CCCC--CCTTTCSEEEEEECCS-SSCEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred             EEEEcc--cchh-----HHHHhhcccC--ccCCCCeEEEEEEecC-CeEEEEEEccccccCHhHHHHHHHHHHHHHH
Confidence            000100  0000     0000001111  1224566666555444 8888999999999999999999999887664
>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1l5aa2 c.43.1.2 (A:175-424) VibH {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure