Citrus Sinensis ID: 035963

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
MKSKQFTLFALILVQILEQFMINVLAININNNNNILPLEHVTTTSLLTNNEASKLLLSPESYLSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVNRAY
cccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHccccccccccHHHHHHHHHHccccccccHHcccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHccccccccHHHHcccccHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHcccccccccHHcccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHHHccEEEHHHcHHHcccccccccccccccHHHHHHHHHHcccccccccEEEcccccccccHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccccHHHHccHEccccc
MKSKQFTLFALILVQILEQFMINVLAINinnnnnilplehvtttslltnneasklllspesylslshyhstcpdleGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVekkcpktvsCADILTAAARDAtvvaggpfwevpfgrkdgkissareanrlvpqgheNVTTLIQIFRDHGLNILDLVVLSGahtigrsscdAINHrlhnfngtrkadpsldTKYLNSLKKKcaasshvyvdldattprifdtayytnlgrnmgllstdqllnsdartgpfvsvlasqplvfsSQFAASMVKLGnigvlarpnegeirfkcssvnray
MKSKQFTLFALILVQILEQFMINVLAININNNNNILPLEHVTTTSLLTNNEASKLLLSPESYLSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASimlshkgserrakvsktlrgfriideikaevekkcpktVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAReanrlvpqgheNVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHnfngtrkadpsLDTKYLNSLKKKcaasshvyvdldattprIFDTAYYTNLGRNMGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIgvlarpnegeirfkcssvnray
MKSKQFTLFALILVQILEQFMINVLAininnnnniLPLEHVTTTSLLTNNEASKlllspesylslshyhsTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVNRAY
*****************************************************KLLLSPESYLSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHK******KVSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKD**********RLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKA**SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRF*********
****QFT*FALILVQILEQFMINVLAININNNNNILPLEHVTTTSLLTNNEASKLLLSPESYLSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSV*R**
MKSKQFTLFALILVQILEQFMINVLAININNNNNILPLEHVTTTSLLTNNEASKLLLSPESYLSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLS**********SKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVNRAY
**SKQFTLFALILVQILEQFMINVLAININNNNNILPLEHVTTTSLLTNNEASKLLLSPESYLSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVNRA*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKSKQFTLFALILVQILEQFMINVLAININNNNNILPLEHVTTTSLLTNNEASKLLLSPESYLSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVNRAY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query360 2.2.26 [Sep-21-2011]
Q9SY33349 Peroxidase 7 OS=Arabidops yes no 0.85 0.876 0.520 1e-89
Q9LSY7329 Peroxidase 30 OS=Arabidop no no 0.827 0.905 0.439 1e-65
Q67Z07325 Peroxidase 2 OS=Arabidops no no 0.816 0.904 0.425 2e-65
P0DI10325 Peroxidase 1 OS=Arabidops no no 0.816 0.904 0.425 2e-65
Q9FX85350 Peroxidase 10 OS=Arabidop no no 0.811 0.834 0.440 2e-65
Q43387328 Peroxidase 71 OS=Arabidop no no 0.825 0.905 0.433 4e-65
O80912349 Peroxidase 23 OS=Arabidop no no 0.802 0.828 0.438 5e-64
Q9FJZ9336 Peroxidase 72 OS=Arabidop no no 0.827 0.886 0.431 7e-64
Q9LEH3327 Peroxidase 15 OS=Ipomoea N/A no 0.805 0.886 0.43 3e-63
P22196330 Cationic peroxidase 2 OS= N/A no 0.808 0.881 0.424 6e-63
>sp|Q9SY33|PER7_ARATH Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1 Back     alignment and function desciption
 Score =  330 bits (846), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 162/311 (52%), Positives = 215/311 (69%), Gaps = 5/311 (1%)

Query: 53  SKLLLSPESYLSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDA 112
           +K L   ++ LSL++Y   CPD E I+  +V+ W + D +   +L+RL FHDC V GCDA
Sbjct: 41  TKSLFPLDNLLSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDA 100

Query: 113 SIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGP 172
           S++L ++G+ERR+  SKTLRGF +ID+IK+E+EK CP  VSCADILT+A+R ATV  GGP
Sbjct: 101 SVLLDYEGTERRSPASKTLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGP 160

Query: 173 FWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSS 232
           +W   +GR+D K S AR+  + VP G  +VT L++ F+ +GLN+LDLVVLSGAHTIG++S
Sbjct: 161 YWPNVYGRRDSKHSYARDVEK-VPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKAS 219

Query: 233 CDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLG 292
           C  I  RL+N+N T  +DPS+D KY + L+++C  +S   VDLD  TP +FD  YY NL 
Sbjct: 220 CGTIQSRLYNYNATSGSDPSIDAKYADYLQRRCRWASET-VDLDPVTPAVFDNQYYINLQ 278

Query: 293 RNMGLLSTDQLLNSDARTGPFVSVLASQ-PLVFSSQFAASMVKLGNIGVLARPNE-GEIR 350
           ++MG+LSTDQ L  D RT P V   A Q P +F  QFA SM KL N+GVL   +  GEIR
Sbjct: 279 KHMGVLSTDQELVKDPRTAPLVKTFAEQSPQIFRQQFAVSMAKLVNVGVLTGEDRVGEIR 338

Query: 351 FKCSSVN-RAY 360
             CS  N RAY
Sbjct: 339 KVCSKSNSRAY 349
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q9LSY7|PER30_ARATH Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1 Back     alignment and function description
>sp|Q67Z07|PER2_ARATH Peroxidase 2 OS=Arabidopsis thaliana GN=PER2 PE=2 SV=1 Back     alignment and function description
>sp|P0DI10|PER1_ARATH Peroxidase 1 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FX85|PER10_ARATH Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1 Back     alignment and function description
>sp|Q43387|PER71_ARATH Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1 Back     alignment and function description
>sp|O80912|PER23_ARATH Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJZ9|PER72_ARATH Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1 Back     alignment and function description
>sp|Q9LEH3|PER15_IPOBA Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1 Back     alignment and function description
>sp|P22196|PER2_ARAHY Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query360
225462324338 PREDICTED: peroxidase 7 [Vitis vinifera] 0.863 0.920 0.680 1e-122
357480599335 Peroxidase [Medicago truncatula] gi|3555 0.816 0.877 0.682 1e-118
388510636332 unknown [Lotus japonicus] 0.833 0.903 0.652 1e-117
356525730340 PREDICTED: peroxidase 7-like [Glycine ma 0.811 0.858 0.673 1e-116
255641567340 unknown [Glycine max] 0.811 0.858 0.670 1e-115
224112345336 predicted protein [Populus trichocarpa] 0.838 0.898 0.662 1e-114
356555092349 PREDICTED: LOW QUALITY PROTEIN: peroxida 0.888 0.916 0.620 1e-113
388504874350 unknown [Lotus japonicus] 0.822 0.845 0.640 1e-112
449444518340 PREDICTED: peroxidase 7-like [Cucumis sa 0.827 0.876 0.653 1e-112
356558221346 PREDICTED: peroxidase 7-like [Glycine ma 0.813 0.846 0.647 1e-111
>gi|225462324|ref|XP_002265667.1| PREDICTED: peroxidase 7 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 213/313 (68%), Positives = 250/313 (79%), Gaps = 2/313 (0%)

Query: 45  SLLTNNEASKLLLSPESYLSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHD 104
           +L T   AS  + SP+  LS +HY +TCPD+EGII  +V+AW++KDYT AAS+IRLHFHD
Sbjct: 26  ALATPKTASPKVSSPQDLLSFTHYLNTCPDVEGIIQNKVRAWVKKDYTLAASIIRLHFHD 85

Query: 105 CVVRGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARD 164
           C VRGCDASI+L+H GSERRA+ SKTLRGF++I+EIKAEVEK+CP  VSCADILTAAARD
Sbjct: 86  CAVRGCDASILLNHAGSERRAEASKTLRGFQVIEEIKAEVEKRCPGRVSCADILTAAARD 145

Query: 165 ATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSG 224
           ATV+ GGPFWEVPFGRKDGK+S AREANR VPQGHENVT LIQ F+  GLNILDLV+LSG
Sbjct: 146 ATVLIGGPFWEVPFGRKDGKVSIAREANR-VPQGHENVTDLIQFFQARGLNILDLVILSG 204

Query: 225 AHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFD 284
           +HTIGRS+C +I HRL NFNGT K +PSL+  YL  LK KC    + YVDLD TTPR FD
Sbjct: 205 SHTIGRSTCHSIQHRLSNFNGTYKPNPSLNATYLRVLKGKC-GRRYNYVDLDGTTPRKFD 263

Query: 285 TAYYTNLGRNMGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARP 344
           T YY NLG+ MGLLSTDQ L  D+RT P V  LA+QP +F++QFA SMVKLGN+ VL   
Sbjct: 264 TEYYKNLGKKMGLLSTDQGLYRDSRTSPIVEALATQPELFTNQFAVSMVKLGNVQVLTGK 323

Query: 345 NEGEIRFKCSSVN 357
            +GEIR  C+ VN
Sbjct: 324 KDGEIRGNCNLVN 336

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|357480599|ref|XP_003610585.1| Peroxidase [Medicago truncatula] gi|355511640|gb|AES92782.1| Peroxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|388510636|gb|AFK43384.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|356525730|ref|XP_003531476.1| PREDICTED: peroxidase 7-like [Glycine max] Back     alignment and taxonomy information
>gi|255641567|gb|ACU21057.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224112345|ref|XP_002316159.1| predicted protein [Populus trichocarpa] gi|222865199|gb|EEF02330.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356555092|ref|XP_003545873.1| PREDICTED: LOW QUALITY PROTEIN: peroxidase 7-like [Glycine max] Back     alignment and taxonomy information
>gi|388504874|gb|AFK40503.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|449444518|ref|XP_004140021.1| PREDICTED: peroxidase 7-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356558221|ref|XP_003547406.1| PREDICTED: peroxidase 7-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query360
TAIR|locus:2015786349 AT1G30870 [Arabidopsis thalian 0.797 0.822 0.534 2.6e-79
TAIR|locus:2012156350 AT1G49570 [Arabidopsis thalian 0.780 0.802 0.450 1e-59
TAIR|locus:2093099329 AT3G21770 [Arabidopsis thalian 0.786 0.860 0.451 1e-59
TAIR|locus:2817952325 AT1G05240 [Arabidopsis thalian 0.791 0.876 0.431 2.7e-59
TAIR|locus:2207215325 AT1G05250 [Arabidopsis thalian 0.791 0.876 0.431 2.7e-59
TAIR|locus:2164366328 AT5G64120 [Arabidopsis thalian 0.788 0.865 0.442 3.5e-59
TAIR|locus:2057165349 AT2G38390 [Arabidopsis thalian 0.794 0.819 0.442 4.5e-59
TAIR|locus:2102087321 AT3G01190 [Arabidopsis thalian 0.788 0.884 0.432 2.5e-58
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.794 0.864 0.414 3.2e-58
TAIR|locus:2154925336 AT5G66390 [Arabidopsis thalian 0.802 0.860 0.434 3.2e-58
TAIR|locus:2015786 AT1G30870 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 156/292 (53%), Positives = 204/292 (69%)

Query:    72 CPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKVSKTL 131
             CPD E I+  +V+ W + D +   +L+RL FHDC V GCDAS++L ++G+ERR+  SKTL
Sbjct:    60 CPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLDYEGTERRSPASKTL 119

Query:   132 RGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREA 191
             RGF +ID+IK+E+EK CP  VSCADILT+A+R ATV  GGP+W   +GR+D K S AR+ 
Sbjct:   120 RGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSYARDV 179

Query:   192 NRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADP 251
              + VP G  +VT L++ F+ +GLN+LDLVVLSGAHTIG++SC  I  RL+N+N T  +DP
Sbjct:   180 EK-VPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDP 238

Query:   252 SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLLNSDARTG 311
             S+D KY + L+++C  +S   VDLD  TP +FD  YY NL ++MG+LSTDQ L  D RT 
Sbjct:   239 SIDAKYADYLQRRCRWASET-VDLDPVTPAVFDNQYYINLQKHMGVLSTDQELVKDPRTA 297

Query:   312 PFVSVLASQ-PLVFSSQFAASMVKLGNIGVLARPNE-GEIRFKCSSVN-RAY 360
             P V   A Q P +F  QFA SM KL N+GVL   +  GEIR  CS  N RAY
Sbjct:   298 PLVKTFAEQSPQIFRQQFAVSMAKLVNVGVLTGEDRVGEIRKVCSKSNSRAY 349
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010054 "trichoblast differentiation" evidence=RCA
TAIR|locus:2012156 AT1G49570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093099 AT3G21770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2817952 AT1G05240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207215 AT1G05250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164366 AT5G64120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057165 AT2G38390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102087 AT3G01190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154925 AT5G66390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SY33PER7_ARATH1, ., 1, 1, ., 1, ., 70.52090.850.8767yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.914
3rd Layer1.11.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00002117001
SubName- Full=Chromosome chr19 scaffold_126, whole genome shotgun sequence; (338 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query360
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-152
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 2e-81
pfam00141180 pfam00141, peroxidase, Peroxidase 1e-63
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 3e-26
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 2e-11
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 3e-11
cd00692328 cd00692, ligninase, Ligninase and other manganese- 2e-10
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 8e-09
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 2e-08
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 2e-04
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  429 bits (1106), Expect = e-152
 Identities = 149/299 (49%), Positives = 192/299 (64%), Gaps = 7/299 (2%)

Query: 63  LSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKG-- 120
           LS+  Y  +CP+ E I+   V+A ++ D   AA+L+RLHFHDC VRGCDAS++L      
Sbjct: 2   LSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANN 61

Query: 121 -SERRAKVSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFG 179
            SE+ A  + +LRGF +ID+IKA +E  CP  VSCADIL  AARDA V+AGGP +EVP G
Sbjct: 62  TSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLG 121

Query: 180 RKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHR 239
           R+DG++SSA +   L P    +V+ LI +F   GL + DLV LSGAHTIGR+ C + + R
Sbjct: 122 RRDGRVSSANDVGNL-PSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFSDR 180

Query: 240 LHNFNGTRKADPSLDTKYLNSLKKKCAASSH--VYVDLDATTPRIFDTAYYTNLGRNMGL 297
           L+NF+GT   DP+LD  Y   L+KKC A       V LD  TP  FD +YY NL    GL
Sbjct: 181 LYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGRGL 240

Query: 298 LSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSV 356
           L++DQ L SD RT   V+  A+    F   FAA+MVK+GNIGVL   ++GEIR  C  V
Sbjct: 241 LTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLT-GSQGEIRKNCRVV 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 360
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.96
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.38
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.1e-104  Score=771.70  Aligned_cols=300  Identities=40%  Similarity=0.703  Sum_probs=284.8

Q ss_pred             cCCCCCCCCcCccccCCcCHHHHHHHHHHHHHHhcccchhhhHHhhhccccccCCCCccccCCCcccccccCCCCcchhH
Q 035963           56 LLSPESYLSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKVSKTLRGFR  135 (360)
Q Consensus        56 ~~~~~~~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~GCDgSIll~~~~~E~~~~~N~~Lrgf~  135 (360)
                      .+...++|+++||++|||++|+||++.|++++.++|+++|++|||+||||||+||||||||+++.+||++++|.+|+||+
T Consensus        18 ~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~~Ek~a~~N~~l~Gf~   97 (324)
T PLN03030         18 TLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSNTEKTALPNLLLRGYD   97 (324)
T ss_pred             ccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCcccccCCCCcCcchHH
Confidence            33444679999999999999999999999999999999999999999999999999999999655899999999999999


Q ss_pred             HHHHHHHHHHhhCCCCcCHHHHHHHhHHHHHHhhCCCccccccccccCCCCchhhhccCCCCCCCCHHHHHHHHHHCCCC
Q 035963          136 IIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLN  215 (360)
Q Consensus       136 vId~iK~~le~~cp~~VScADiialAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls  215 (360)
                      +|+.||+.+|++||++||||||||+||||||+++|||.|+|++||||+++|.++++. +||+|+.++++|++.|+++||+
T Consensus        98 ~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~  176 (324)
T PLN03030         98 VIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGLN  176 (324)
T ss_pred             HHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999999999999999887775 8999999999999999999999


Q ss_pred             hhhhhhhhcccccccccccccccccccCCCCC-CCCCCCCHHHHHHHhhcCCC--CCCccccCCCCCCcccchHHHHHhh
Q 035963          216 ILDLVVLSGAHTIGRSSCDAINHRLHNFNGTR-KADPSLDTKYLNSLKKKCAA--SSHVYVDLDATTPRIFDTAYYTNLG  292 (360)
Q Consensus       216 ~~dlVaLsGaHTiG~ahc~~f~~Rl~~f~g~~-~~DP~~d~~~~~~L~~~Cp~--~~~~~~~lD~~Tp~~FDN~Yy~~ll  292 (360)
                      .+|||+||||||||++||.+|.+|||||.|++ .+||+||+.|++.|++.||.  ++.+.+++|+.||.+|||+||++|+
T Consensus       177 ~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nll  256 (324)
T PLN03030        177 TQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNLK  256 (324)
T ss_pred             HHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHHH
Confidence            99999999999999999999999999999875 58999999999999999995  2223688999999999999999999


Q ss_pred             cccccccchhhhccCCCcHHHHHHhhcCc----hHHHHHHHHHHHHHhcCCCCCCCCCCccccccccCC
Q 035963          293 RNMGLLSTDQLLNSDARTGPFVSVLASQP----LVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN  357 (360)
Q Consensus       293 ~~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~Ff~~Fa~Am~Km~~igv~tg~~~GeIR~~C~~~N  357 (360)
                      .++|+|+|||+|+.|++|+++|++||.|+    ++|+++|++||+|||+|+|+|| .+|||||+|+++|
T Consensus       257 ~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG-~~GEIRk~C~~vN  324 (324)
T PLN03030        257 NGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTG-TNGEIRKVCSAIN  324 (324)
T ss_pred             hcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCC-CCCceeccccccC
Confidence            99999999999999999999999999885    5999999999999999999999 9999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query360
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 6e-62
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 6e-60
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 6e-60
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 2e-59
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 3e-59
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 3e-59
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 4e-59
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 5e-59
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 5e-59
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 5e-59
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 6e-59
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 1e-58
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 2e-58
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 3e-58
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 3e-58
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 2e-57
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 3e-55
1sch_A294 Peanut Peroxidase Length = 294 5e-54
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 6e-48
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 2e-09
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 5e-08
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 9e-08
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 9e-08
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 1e-07
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 1e-07
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 1e-07
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 1e-07
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 1e-07
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 1e-07
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 1e-07
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 1e-07
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 1e-07
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 1e-07
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 1e-07
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 1e-07
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure 
Iteration: 1

 Score =  234 bits (597), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 123/295 (41%), Positives = 169/295 (57%), Gaps = 9/295 (3%)
Query: 71  TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKVS-- 128
           TCP+   I+   +Q  ++ D    ASLIRLHFHDC V GCDASI+L   GS +  K +  
Sbjct: 11  TCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGP 70
Query: 129 --KTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
              + RGF ++D IK  +E  CP  VSC+D+L  A+  +  +AGGP W V  GR+D   +
Sbjct: 71  NVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTA 130
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGT 246
           +   AN  +P   E+++ +   F   GLN  DLV LSGAHT GR+ C   N+RL NF+GT
Sbjct: 131 NLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGT 190
Query: 247 RKADPSLDTKYLNSLKKKCA--ASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLL 304
              DP+L++  L++L++ C    S+    +LD +TP  FD  Y+ NL  N GLL +DQ L
Sbjct: 191 GNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQEL 250
Query: 305 --NSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
              + + T   V+  AS   +F   FA SM+ +GNI  L   N GEIR  C  VN
Sbjct: 251 FSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSN-GEIRLDCKKVN 304
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query360
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-147
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-146
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-146
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-145
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-143
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-139
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-136
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 3e-72
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 1e-64
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 3e-62
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 7e-62
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 4e-58
2e39_A344 Peroxidase; heme protein, coordination geometry of 5e-58
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 8e-57
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 1e-16
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 2e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
 Score =  416 bits (1071), Expect = e-147
 Identities = 126/303 (41%), Positives = 176/303 (58%), Gaps = 9/303 (2%)

Query: 63  LSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKG-- 120
           L +  Y+++CP  E ++ + V A    +   A  LIR+HFHDC VRGCDAS++L      
Sbjct: 2   LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61

Query: 121 -SERRAKVSK-TLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF 178
            +E+ A  +  +LRGF +I   K+ VE  CP+TVSCADIL  AARD+  +AG   ++VP 
Sbjct: 62  TAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPS 121

Query: 179 GRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINH 238
           GR+DG +S A EAN  +P    N T LI  F +  L   ++V LSGAH+IG + C +  +
Sbjct: 122 GRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSFTN 181

Query: 239 RLHNFNGTRKADPSLDTKYLNSLKKKCAASS----HVYVDLDATTPRIFDTAYYTNLGRN 294
           RL+NFN     DP+L   Y   L+  C A+S     + V LD  TP + D  YYT +   
Sbjct: 182 RLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT 241

Query: 295 MGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCS 354
           +GLL++DQ L ++A     V   A     ++S+FA +MVK+G I VL    +GEIR  CS
Sbjct: 242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLT-GTQGEIRTNCS 300

Query: 355 SVN 357
            VN
Sbjct: 301 VVN 303
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query360
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=6.9e-107  Score=785.49  Aligned_cols=294  Identities=43%  Similarity=0.730  Sum_probs=285.9

Q ss_pred             CCcCccccCCcCHHHHHHHHHHHHHHhcccchhhhHHhhhccccccCCCCccccCCC--c-ccccccCCC-CcchhHHHH
Q 035963           63 LSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHK--G-SERRAKVSK-TLRGFRIID  138 (360)
Q Consensus        63 L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~GCDgSIll~~~--~-~E~~~~~N~-~Lrgf~vId  138 (360)
                      |+++||++|||++|.|||+.|++++.++|+++|++||||||||||+||||||||+++  + +|+++++|. +||||++||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            889999999999999999999999999999999999999999999999999999974  3 899999999 899999999


Q ss_pred             HHHHHHHhhCCCCcCHHHHHHHhHHHHHHhhCCCccccccccccCCCCchhhhccCCCCCCCCHHHHHHHHHHCCCChhh
Q 035963          139 EIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILD  218 (360)
Q Consensus       139 ~iK~~le~~cp~~VScADiialAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~d  218 (360)
                      +||++||+.||++||||||||||||+||+++|||.|+|++||||++++...+++.+||+|+.++++|++.|++|||+++|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             hhhhhcccccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCC--C--CCccccCCCCCCcccchHHHHHhhcc
Q 035963          219 LVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAA--S--SHVYVDLDATTPRIFDTAYYTNLGRN  294 (360)
Q Consensus       219 lVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~--~--~~~~~~lD~~Tp~~FDN~Yy~~ll~~  294 (360)
                      |||||||||||++||.+|.+|||||+|++.+||+||+.|++.|+..||.  +  +++.++||+.||.+|||+||++|+.+
T Consensus       162 ~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~~~  241 (304)
T 3hdl_A          162 MVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT  241 (304)
T ss_dssp             HHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHHTT
T ss_pred             hhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHHhC
Confidence            9999999999999999999999999999889999999999999999996  3  44478999999999999999999999


Q ss_pred             cccccchhhhccCCCcHHHHHHhhcCchHHHHHHHHHHHHHhcCCCCCCCCCCccccccccCC
Q 035963          295 MGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN  357 (360)
Q Consensus       295 ~glL~SD~~L~~d~~t~~~V~~yA~d~~~Ff~~Fa~Am~Km~~igv~tg~~~GeIR~~C~~~N  357 (360)
                      +|||+|||+|+.|++|+++|++||.||++||++|++||+||++|||+|| .+||||++|++||
T Consensus       242 ~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg-~~GeIR~~C~~~N  303 (304)
T 3hdl_A          242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTG-TQGEIRTNCSVVN  303 (304)
T ss_dssp             CCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCT-TSSBCCSBTTBCC
T ss_pred             cCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCC-CCCeeeCCccccC
Confidence            9999999999999999999999999999999999999999999999999 9999999999999
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 360
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-104
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-101
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-100
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-96
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 3e-95
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 6e-95
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 3e-59
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 8e-59
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 5e-57
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 1e-39
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 1e-39
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 5e-39
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  307 bits (788), Expect = e-104
 Identities = 129/303 (42%), Positives = 179/303 (59%), Gaps = 9/303 (2%)

Query: 63  LSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSE 122
           L+ + Y  TCP+L  I+   +      D    ASL+RLHFHDC V+GCD S++L++  + 
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61

Query: 123 RRAKVS----KTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF 178
              + +     ++RG  ++++IK  VE  CP TVSCADIL  AA  A+V+ GGP W VP 
Sbjct: 62  ESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPL 121

Query: 179 GRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINH 238
           GR+D   ++   AN+ +P    N+T L   F   GLN LDLV LSG HT GR+ C    +
Sbjct: 122 GRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFIN 181

Query: 239 RLHNFNGTRKADPSLDTKYLNSLKKKCAASS--HVYVDLDATTPRIFDTAYYTNLGRNMG 296
           RL+NF+ T   DP+L+T YL  L+ +C  ++      +LD +TP  FD  YY+NL +  G
Sbjct: 182 RLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLNG 241

Query: 297 LLSTDQLL--NSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCS 354
           LL +DQ L     A T P V+  +S    F S F  SM+K+GNIGVL   +EGEIR +C+
Sbjct: 242 LLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVL-TGDEGEIRLQCN 300

Query: 355 SVN 357
            VN
Sbjct: 301 FVN 303
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query360
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.98
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=1.9e-101  Score=746.73  Aligned_cols=295  Identities=45%  Similarity=0.741  Sum_probs=284.4

Q ss_pred             CCCcCccccCCcCHHHHHHHHHHHHHHhcccchhhhHHhhhccccccCCCCccccCCC--c-ccccccCCCC-cchhHHH
Q 035963           62 YLSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHK--G-SERRAKVSKT-LRGFRII  137 (360)
Q Consensus        62 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~GCDgSIll~~~--~-~E~~~~~N~~-Lrgf~vI  137 (360)
                      ||+++||++|||++|+||+++|++.+.+||+++|++|||+||||||+||||||||+++  + +|+++++|.+ ++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            7999999999999999999999999999999999999999999999999999999974  2 8999999986 5999999


Q ss_pred             HHHHHHHHhhCCCCcCHHHHHHHhHHHHHHhhCCCccccccccccCCCCchhhhccCCCCCCCCHHHHHHHHHHCCCChh
Q 035963          138 DEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNIL  217 (360)
Q Consensus       138 d~iK~~le~~cp~~VScADiialAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~  217 (360)
                      +.||++||..||++||||||||||||+||+++|||.|+|++||+|+++|+..++..+||.|+.++++|+..|++|||+.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             hhhhhhcccccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCC--CCCccccCCCCCCcccchHHHHHhhccc
Q 035963          218 DLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAA--SSHVYVDLDATTPRIFDTAYYTNLGRNM  295 (360)
Q Consensus       218 dlVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~--~~~~~~~lD~~Tp~~FDN~Yy~~ll~~~  295 (360)
                      ||||||||||||++||.+|..|+|+|++++.+||++++.|+..|+..||.  .....+.+|..||.+|||+||++++.++
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~~~~  240 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLN  240 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHHHTTC
T ss_pred             HHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999997  2222678999999999999999999999


Q ss_pred             ccccchhhhccCC--CcHHHHHHhhcCchHHHHHHHHHHHHHhcCCCCCCCCCCccccccccCC
Q 035963          296 GLLSTDQLLNSDA--RTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN  357 (360)
Q Consensus       296 glL~SD~~L~~d~--~t~~~V~~yA~d~~~Ff~~Fa~Am~Km~~igv~tg~~~GeIR~~C~~~N  357 (360)
                      |+|+|||+|+.|+  +|+++|++||.|+++|+++|++||+||++|||||| .+||||++|+++|
T Consensus       241 glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg-~~GeiR~~C~~~N  303 (304)
T d1fhfa_         241 GLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTG-DEGEIRLQCNFVN  303 (304)
T ss_dssp             CSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCT-TSSBCCSBTTBCC
T ss_pred             cccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCC-CCCcccCcccCcC
Confidence            9999999999996  79999999999999999999999999999999999 9999999999999
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure