Citrus Sinensis ID: 036024

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
Protein Sequence
AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccEEEEEccccccccccccccccccEEEEcccccHHHccccHHHHHHHHHHHHHcccEEEEcccccccccccccccccccccccEEEEEEEcccccccccccEEEEEEEccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccHHHHHHHHHHHccEEEccccccccccccEEEEEccccHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cEEEcccHEEEccccccccccEEEEEEEEcccccccEcccccccccEEEEEEcccccccccccHHHHHHHHHHHHHccEEEEEHHHHHHHccccccEEEEcccccccEEEEEEcccHHHHHHccHEEEEEccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEcccccccHHHHHHHHHHHccEEEEEccccccccccEEEEEEcccHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
ayidssvivgqagdledevgkycnieylecgpgnnffpdlkgtsrtdiiffcspnnptghaaTQNQLEQLVEFARnngsiiifdsayaayvtdgcprsiyeipgaREVAIEISSfskfsgftgvrlgwtvvpeellfssgfpvindfNRIICTcfngasniaqAGGLaclssegleAVHSVVDYYKENTKILIDTLASLGIkvygginapyvwahfpgrksWDVFAEILEKthittvpgsgfgpggeeyIRISGFGHRESILEASRRLEALF
Flexible Loop (DISEMBL)
ayidssvivgqagdledEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHittvpgsgfgpgGEEYIRISGFGHRESILEASRRLEALF
Low Complexity Region (SEG)
AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF
Disordered region (IsUnstruct)
******VIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGH***************
Disordered Region (DISOPRED)
AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF
Disordered Region (DISEMBL)
AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF
Disordered Region (DISPRO)
AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	272	2.2.26 [Sep-21-2011]
Q9ZQI7	456	Aminotransferase ALD1 OS=	yes	no	1.0	0.596	0.727	1e-121
Q10MQ2	464	Probable LL-diaminopimela	yes	no	1.0	0.586	0.698	1e-110
Q93ZN9	461	LL-diaminopimelate aminot	no	no	1.0	0.590	0.705	1e-109
Q6VMN7	440	Aminotransferase ALD1 hom	no	no	0.992	0.613	0.652	4e-94
Q6MDE0	411	LL-diaminopimelate aminot	yes	no	0.988	0.654	0.544	1e-83
Q8AAB8	410	LL-diaminopimelate aminot	yes	no	0.981	0.651	0.456	1e-65
Q5LC03	410	LL-diaminopimelate aminot	yes	no	0.981	0.651	0.456	1e-65
Q64SY6	410	LL-diaminopimelate aminot	yes	no	0.981	0.651	0.456	1e-65
Q39Z65	410	LL-diaminopimelate aminot	yes	no	0.977	0.648	0.459	3e-64
A6L7E4	409	LL-diaminopimelate aminot	yes	no	0.974	0.647	0.459	5e-64

>sp|Q9ZQI7|ALD1_ARATH Aminotransferase ALD1 OS=Arabidopsis thaliana GN=ALD1 PE=2 SV=2

 Score =  436 bits (1120), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 198/272 (72%), Positives = 235/272 (86%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AYIDSSVI+GQ G   ++  KY N+ Y+ CGP N+FFPDL  T RTD+IFFCSPNNPTG+
Sbjct: 168 AYIDSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDLAMTPRTDVIFFCSPNNPTGY 227

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
            A++ QL QLV+FA+ NGSIIIFDSAYAA++ DG PRSIYEIPGAREVAIE+SSFSKF+G
Sbjct: 228 VASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAG 287

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGW+++P+ELL+S+GFP+INDF+RI+ T FNGASNIAQAGGLACLSS GL+ + S
Sbjct: 288 FTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQAGGLACLSSGGLKEIRS 347

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           V +YYKEN KIL+DTL SLG+KVYGG+NAPY+W HF G KSWDVF EILE THI TVPGS
Sbjct: 348 VNNYYKENRKILMDTLVSLGLKVYGGVNAPYLWVHFKGSKSWDVFNEILENTHIITVPGS 407

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGEEY+RISGFG R+ I+EAS+RL+  F
Sbjct: 408 GFGPGGEEYLRISGFGRRDHIVEASKRLQNFF 439

Aminotransferase involved in local and systemic acquired resistance (SAR) to the bacterial pathogen P.syringae. Required for salicylic acid (SA) and camalexin accumulation upon pathogen infection. Possesses aminotransferase activity in vitro and may generate amino-acid-derived defense signals in vivo. May be involved in ethylene-induced senescence signaling.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: -

>sp|Q10MQ2|DAPAT_ORYSJ Probable LL-diaminopimelate aminotransferase, chloroplastic OS=Oryza sativa subsp. japonica GN=AGD2 PE=2 SV=1

 Score =  397 bits (1020), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/272 (69%), Positives = 231/272 (84%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AY+DSSVI+GQ G  +++V KY NIEY++C P N FFPDL    RTDIIFFCSPNNPTG 
Sbjct: 192 AYVDSSVIMGQTGLYQEDVQKYGNIEYMKCSPENGFFPDLSSVPRTDIIFFCSPNNPTGA 251

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AA+++QL +LV+FA++NGSII++DSAYA Y++D  P+SI+EIPGA+EVAIE +SFSK++G
Sbjct: 252 AASRDQLTKLVKFAKDNGSIIVYDSAYAMYISDDSPKSIFEIPGAKEVAIETASFSKYAG 311

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTVVP+ELLFS G PV  DFNRI+CTCFNGASNI+QAGGL CLS EGL+A+  
Sbjct: 312 FTGVRLGWTVVPKELLFSDGHPVAKDFNRIVCTCFNGASNISQAGGLGCLSPEGLKAMSD 371

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           VV +YKENTKI++DT  SLG  VYG  NAPYVW HFPGR SWDVFAEILEK H+ T PGS
Sbjct: 372 VVGFYKENTKIIVDTFTSLGFNVYGAKNAPYVWVHFPGRNSWDVFAEILEKAHVVTTPGS 431

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGE ++R+S FGHRE+I+EA+RRL+ L+
Sbjct: 432 GFGPGGEGFVRVSAFGHRENIIEAARRLKQLY 463

Required for lysine biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|Q93ZN9|DAPAT_ARATH LL-diaminopimelate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=DAP PE=1 SV=1

 Score =  395 bits (1016), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/272 (70%), Positives = 225/272 (82%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AY+DSSVI+GQ G    +V KY NIEY+ C P N FFPDL    RTDIIFFCSPNNPTG 
Sbjct: 189 AYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGA 248

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AAT+ QL QLVEFA+ NGSII++DSAYA Y++D  PRSI+EIPGA EVA+E +SFSK++G
Sbjct: 249 AATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAG 308

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTV+P++LL+S GFPV  DFNRIICTCFNGASNI+QAG LACL+ EGLEA+H 
Sbjct: 309 FTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHK 368

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           V+ +YKENT I+IDT  SLG  VYGG NAPYVW HFP + SWDVFAEILEKTH+ T PGS
Sbjct: 369 VIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGS 428

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGE ++R+S FGHRE+ILEA RR + L+
Sbjct: 429 GFGPGGEGFVRVSAFGHRENILEACRRFKQLY 460

Required for lysine biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli. Not active with meso-diaminopimelate, lysine or ornithine as substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|Q6VMN7|ALD1_ORYSJ Aminotransferase ALD1 homolog OS=Oryza sativa subsp. japonica GN=ALD1 PE=2 SV=1

 Score =  344 bits (882), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 180/276 (65%), Positives = 220/276 (79%), Gaps = 6/276 (2%)

Query: 2   YIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHA 61
           Y+D+ VI+GQ G  +D  G+Y  IEY+ C P N FFPDL    RTD+IFFCSPNNPTGHA
Sbjct: 165 YVDNGVIMGQTGKADDG-GRYAGIEYMRCAPENAFFPDLSRVRRTDVIFFCSPNNPTGHA 223

Query: 62  ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG----CPRSIYEIPGAREVAIEISSFSK 117
           A++ QL QLVE AR NGSII+FDSAY++Y++       PRSIYEIPGAREVAIE+SSFSK
Sbjct: 224 ASREQLRQLVELARRNGSIIVFDSAYSSYISSSSSSSTPRSIYEIPGAREVAIEVSSFSK 283

Query: 118 FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS-EGLE 176
           F+GFTGVRLGW VVP+ELL+S G PV  DF+R++CTCFNGAS IAQAGG+ACLS+ EG  
Sbjct: 284 FAGFTGVRLGWAVVPDELLYSDGVPVARDFDRVVCTCFNGASGIAQAGGVACLSTEEGRG 343

Query: 177 AVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT 236
           AV  VV  Y+EN ++L++T  SLG +V+GG +APYVW  FPGR+SWDVFAEILEKTH+ T
Sbjct: 344 AVARVVGVYRENARVLVETFRSLGKEVHGGGDAPYVWVRFPGRRSWDVFAEILEKTHVIT 403

Query: 237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           VPGSGFGPGGE +IR+S F  R+ +LEA +RL++  
Sbjct: 404 VPGSGFGPGGEGFIRVSAFNSRDKVLEACQRLKSFL 439

Probable aminotransferase that may generate amino-acid-derived defense signals and be involved in resistance to pathogens.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q6MDE0|DAPAT_PARUW LL-diaminopimelate aminotransferase OS=Protochlamydia amoebophila (strain UWE25) GN=dapL PE=1 SV=2

 Score =  310 bits (793), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 147/270 (54%), Positives = 187/270 (69%), Gaps = 1/270 (0%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AY+D+ VI GQA   +    +Y  I Y+ C P NNFFPDL    +TD+I+FCSPNNPTG 
Sbjct: 131 AYVDTGVINGQASFFQTSTKQYQRITYMSCLPENNFFPDLANLPKTDLIYFCSPNNPTGS 190

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSFSKFS 119
           AAT  QL +LV+FA+   SIIIFD+AYA++V +   PRSIYEI GA+EVAIE+ SFSK  
Sbjct: 191 AATNEQLRELVQFAKKRQSIIIFDAAYASFVRSSHIPRSIYEIEGAKEVAIEVGSFSKMI 250

Query: 120 GFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVH 179
           GFTGVRLGW+VVP++L F  G  V  D+ RI+CT FNGASNIAQAGGLA L  EGL+A+ 
Sbjct: 251 GFTGVRLGWSVVPKQLRFEDGHSVQQDWERIVCTFFNGASNIAQAGGLAALQKEGLQAID 310

Query: 180 SVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPG 239
            +  YY +N+ IL       G KVYGG N PY+W HFP   SW+ F  +L+++ + +VPG
Sbjct: 311 ELSSYYMKNSNILKKAFEECGYKVYGGENVPYLWVHFPQLTSWEAFEILLKQSQLVSVPG 370

Query: 240 SGFGPGGEEYIRISGFGHRESILEASRRLE 269
           SGFG  GE ++R S FG +  I  A  R++
Sbjct: 371 SGFGSAGEGFLRFSAFGKQSDITVALPRIK 400

Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli. Is also able to use meso-diaminopimelate, lysine or ornithine as substrates.

Protochlamydia amoebophila (strain UWE25) (taxid: 264201)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|Q8AAB8|DAPAT_BACTN LL-diaminopimelate aminotransferase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=dapL PE=3 SV=1

 Score =  249 bits (637), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 125/274 (45%), Positives = 175/274 (63%), Gaps = 7/274 (2%)

Query: 2   YIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHA 61
           YIDS+V+ G+AG LE+  GK+ N+ Y+ C   N+F P++    R DI++ C PNNPTG  
Sbjct: 135 YIDSNVMCGRAGVLEEGTGKWSNVTYMPCTSENDFIPEIP-DKRIDIVYLCYPNNPTGTT 193

Query: 62  ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFSG 120
            T+ +L++ V++A  N ++I+FD+AY AY+ D   P SIYEI GA++ AIE  SFSK +G
Sbjct: 194 LTKPELKKWVDYALANDTLILFDAAYEAYIQDADVPHSIYEIKGAKKCAIEFRSFSKTAG 253

Query: 121 FTGVRLGWTVVPEEL----LFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLE 176
           FTGVR G+TVVP+EL    L     P+   +NR  CT FNG S I Q    A  S+EG  
Sbjct: 254 FTGVRCGYTVVPKELTAATLEGDRIPLNKLWNRRQCTKFNGTSYITQRAAEAVYSTEGKA 313

Query: 177 AVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHIT 235
            +   ++YY  N KI+ + L + G+KVYGG+NAPY+W   P G  SW  F ++L + ++ 
Sbjct: 314 QIKETINYYMSNAKIMKEGLEATGLKVYGGVNAPYLWVKTPNGLSSWRFFEQMLYEANVV 373

Query: 236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269
             PG GFGP GE YIR++ FG     +EA RR++
Sbjct: 374 GTPGVGFGPSGEGYIRLTAFGDHNDCMEAMRRIK 407

Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli.

Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) (taxid: 226186)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|Q5LC03|DAPAT_BACFN LL-diaminopimelate aminotransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=dapL PE=1 SV=1

 Score =  249 bits (636), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 125/274 (45%), Positives = 176/274 (64%), Gaps = 7/274 (2%)

Query: 2   YIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHA 61
           YIDS+V+ G+AG L+ E GK+ N+ Y+ C   N+F P +    R DI++ C PNNPTG  
Sbjct: 135 YIDSNVMCGRAGVLDTESGKWSNVTYMPCTAENHFIPAIP-EKRIDIVYLCYPNNPTGTT 193

Query: 62  ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSG 120
            T+ +L++ V++A  N ++I+FD+AY AY+ +   P SIYEI GA++ AIE  SFSK +G
Sbjct: 194 LTKAELKKWVDYALANDTLILFDAAYEAYIREPDIPHSIYEIKGAKKCAIEFRSFSKTAG 253

Query: 121 FTGVRLGWTVVPEEL----LFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLE 176
           FTGVR G+TVVP+EL    L     P+   +NR  CT FNG S I Q    A  + EG E
Sbjct: 254 FTGVRCGYTVVPKELTAATLEGERIPLNRLWNRRQCTKFNGTSYITQRAAEAIYTPEGKE 313

Query: 177 AVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHIT 235
            +   ++YY  N +I+ + L S G+KVYGG+NAPY+W   P G  SW  F ++L + ++ 
Sbjct: 314 QIQETINYYMTNARIMKEGLESTGLKVYGGVNAPYLWVKTPKGTSSWRFFDQMLYEANVV 373

Query: 236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269
             PG GFGP GE YIR++ FG R+  +EA RR++
Sbjct: 374 GTPGVGFGPSGEGYIRLTAFGERDDCIEAMRRIK 407

Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli. Can also use m-DAP instead of LL-DAP as the amino-group donor.

Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) (taxid: 272559)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|Q64SY6|DAPAT_BACFR LL-diaminopimelate aminotransferase OS=Bacteroides fragilis (strain YCH46) GN=dapL PE=3 SV=1

 Score =  249 bits (636), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 125/274 (45%), Positives = 176/274 (64%), Gaps = 7/274 (2%)

Query: 2   YIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHA 61
           YIDS+V+ G+AG L+ E GK+ N+ Y+ C   N+F P +    R DI++ C PNNPTG  
Sbjct: 135 YIDSNVMCGRAGVLDTESGKWSNVTYMPCTAENHFIPAIP-EKRIDIVYLCYPNNPTGTT 193

Query: 62  ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSG 120
            T+ +L++ V++A  N ++I+FD+AY AY+ +   P SIYEI GA++ AIE  SFSK +G
Sbjct: 194 LTKAELKKWVDYALANDTLILFDAAYEAYIREPDIPHSIYEIKGAKKCAIEFRSFSKTAG 253

Query: 121 FTGVRLGWTVVPEEL----LFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLE 176
           FTGVR G+TVVP+EL    L     P+   +NR  CT FNG S I Q    A  + EG E
Sbjct: 254 FTGVRCGYTVVPKELTAATLEGERIPLNRLWNRRQCTKFNGTSYITQRAAEAIYTPEGKE 313

Query: 177 AVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHIT 235
            +   ++YY  N +I+ + L S G+KVYGG+NAPY+W   P G  SW  F ++L + ++ 
Sbjct: 314 QIQETINYYMTNARIMKEGLESTGLKVYGGVNAPYLWVKTPNGTSSWRFFDQMLYEANVV 373

Query: 236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269
             PG GFGP GE YIR++ FG R+  +EA RR++
Sbjct: 374 GTPGVGFGPSGEGYIRLTAFGERDDCIEAMRRIK 407

Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli.

Bacteroides fragilis (strain YCH46) (taxid: 295405)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|Q39Z65|DAPAT_GEOMG LL-diaminopimelate aminotransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dapL PE=3 SV=1

 Score =  244 bits (624), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 126/274 (45%), Positives = 176/274 (64%), Gaps = 8/274 (2%)

Query: 2   YIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHA 61
           Y D++V++G+ GD  DE G Y  I Y+ C   N F P L  T + DII+ C PNNPTG  
Sbjct: 135 YNDTNVMIGRTGD-ADEKGYYKGIVYMPCTEANGFIPSLP-TEKVDIIYLCFPNNPTGTV 192

Query: 62  ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSG 120
           AT+ +L++ V++A  N ++I FD+AY A++TD   P SIYEI GA++ AIE  SFSK +G
Sbjct: 193 ATKAELKKWVDYANANDAVIFFDAAYEAFITDPAIPHSIYEIEGAKKCAIEFRSFSKTAG 252

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRI----ICTCFNGASNIAQAGGLACLSSEGLE 176
           FTGVR G  VVPEE++ ++       FN++      T FNGAS   Q    A  S EG +
Sbjct: 253 FTGVRCGLVVVPEEVMGTTPTGEKYSFNKLWLRRTTTKFNGASYPVQKAAAAVYSDEGWK 312

Query: 177 AVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHIT 235
               ++DYY EN +I+ + LA+ G+ VYGG+NAPY+W   P G  SWD F ++L + ++ 
Sbjct: 313 QNKEIIDYYMENARIIREGLAAAGLTVYGGVNAPYIWLKTPGGMSSWDFFDKLLTECNVV 372

Query: 236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269
             PGSGFGP GE + R+S FGHRE+++EA  R++
Sbjct: 373 GTPGSGFGPSGEGFFRLSAFGHRENVIEAVERIK 406

Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli.

Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) (taxid: 269799)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 3

>sp|A6L7E4|DAPAT_BACV8 LL-diaminopimelate aminotransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=dapL PE=3 SV=1

 Score =  244 bits (623), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 126/274 (45%), Positives = 175/274 (63%), Gaps = 9/274 (3%)

Query: 2   YIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHA 61
           YIDS+V+ G+AG LED  G++ N+ YL C   NNF P++    R DI++ C PNNPTG  
Sbjct: 135 YIDSNVMCGRAGILED--GRWSNVVYLPCLSENNFVPEIP-DRRIDILYLCYPNNPTGTV 191

Query: 62  ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSG 120
            ++ +L++ V +A  N ++I++D+AY AY+ D   P SIYEI GA++VAIE  SFSK +G
Sbjct: 192 ISKAELKKWVNYALENDTLILYDAAYEAYIQDPDIPHSIYEIKGAKKVAIEFRSFSKTAG 251

Query: 121 FTGVRLGWTVVPEEL----LFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLE 176
           FTGVR G+TVVP+EL    L     P+   +NR  CT FNG S I Q G  A  + EG +
Sbjct: 252 FTGVRCGYTVVPKELTAATLEGERIPLNRMWNRRQCTKFNGTSYITQRGAEAIYTPEGKK 311

Query: 177 AVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHIT 235
            V +++ YY  N +I+ + L S G+KV+GG NAPY+W   PG   SW  F ++L + ++ 
Sbjct: 312 QVKAIIQYYMANARIMKEALESTGLKVFGGENAPYLWVKAPGEVSSWKFFEQMLYEANVV 371

Query: 236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269
             PG GFGP GE YIR++ FG R    EA +R+ 
Sbjct: 372 GTPGVGFGPSGEGYIRLTAFGERADCEEAMKRIR 405

Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli.

Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) (taxid: 435590)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
225447860	440	PREDICTED: LL-diaminopimelate aminotrans	1.0	0.618	0.797	1e-128
147810974	392	hypothetical protein VITISV_011509 [Viti	1.0	0.693	0.797	1e-127
224094949	397	predicted protein [Populus trichocarpa]	1.0	0.685	0.783	1e-127
224155798	395	predicted protein [Populus trichocarpa]	1.0	0.688	0.783	1e-127
255587391	440	Aspartate aminotransferase, putative [Ri	1.0	0.618	0.786	1e-126
224134126	397	predicted protein [Populus trichocarpa]	1.0	0.685	0.764	1e-125
356525892	449	PREDICTED: LL-diaminopimelate aminotrans	0.996	0.603	0.774	1e-125
255638340	292	unknown [Glycine max]	0.996	0.928	0.771	1e-123
297831860	456	hypothetical protein ARALYDRAFT_480324 [	1.0	0.596	0.738	1e-120
224063177	397	predicted protein [Populus trichocarpa]	1.0	0.685	0.738	1e-120

>gi|225447860|ref|XP_002268766.1| PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Vitis vinifera] gi|296081525|emb|CBI20048.3| unnamed protein product [Vitis vinifera]

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 217/272 (79%), Positives = 239/272 (87%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AYIDSSVI+GQ GD +DE GKY NI+Y+ C P NNFFPDL  T+ TD+IF CSPNNPTGH
Sbjct: 168 AYIDSSVIIGQTGDFQDETGKYQNIKYMPCRPQNNFFPDLTTTATTDVIFICSPNNPTGH 227

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AA++ QLEQLVEFAR N SIIIFDSAYAAYVTD  PRSI+EIPGAREVAIEISSFSKF+G
Sbjct: 228 AASRKQLEQLVEFARANRSIIIFDSAYAAYVTDESPRSIFEIPGAREVAIEISSFSKFAG 287

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTVVP+ELLFS+GFPVI D+NRI+CTCFNGAS+IAQAGGLACLSS+GL AV S
Sbjct: 288 FTGVRLGWTVVPDELLFSNGFPVIKDYNRIVCTCFNGASSIAQAGGLACLSSDGLMAVQS 347

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           VVDYYKEN KIL DT  SLG+ VYGGINAPY W HFPG KSWDVF E+LEKTHI TVPG 
Sbjct: 348 VVDYYKENAKILGDTFTSLGLDVYGGINAPYAWVHFPGMKSWDVFTELLEKTHIITVPGC 407

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGEE+IR+S FGHRE ILEASRRL++L 
Sbjct: 408 GFGPGGEEHIRVSAFGHRECILEASRRLKSLL 439

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147810974|emb|CAN63481.1| hypothetical protein VITISV_011509 [Vitis vinifera]

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/272 (79%), Positives = 239/272 (87%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AYIDSSVI+GQ GD +DE GKY NI+Y+ C P NNFFPDL  T+ TD+IF CSPNNPTGH
Sbjct: 120 AYIDSSVIIGQTGDFQDETGKYQNIKYMPCRPQNNFFPDLTTTATTDVIFICSPNNPTGH 179

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AA++ QLEQLVEFAR N SIIIFDSAYAAYVTD  PRSI+EIPGAREVAIEISSFSKF+G
Sbjct: 180 AASRKQLEQLVEFARANRSIIIFDSAYAAYVTDESPRSIFEIPGAREVAIEISSFSKFAG 239

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTVVP+ELLFS+GFPVI D+NRI+CTCFNGAS+IAQAGGLACLSS+GL AV S
Sbjct: 240 FTGVRLGWTVVPDELLFSNGFPVIKDYNRIVCTCFNGASSIAQAGGLACLSSDGLMAVQS 299

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           VVDYYKEN KIL DT  SLG+ VYGGINAPY W HFPG KSWDVF E+LEKTHI TVPG 
Sbjct: 300 VVDYYKENAKILGDTFTSLGLDVYGGINAPYAWVHFPGXKSWDVFTELLEKTHIITVPGC 359

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGEE+IR+S FGHRE ILEASRRL++L 
Sbjct: 360 GFGPGGEEHIRVSAFGHRECILEASRRLKSLL 391

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224094949|ref|XP_002310302.1| predicted protein [Populus trichocarpa] gi|222853205|gb|EEE90752.1| predicted protein [Populus trichocarpa]

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 213/272 (78%), Positives = 240/272 (88%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AY+DSSVI+GQAGD ED+   Y NIEY++C P  NFFPDL  TSRTDIIFFCSPNNPTGH
Sbjct: 125 AYVDSSVIIGQAGDFEDKSRMYGNIEYMKCVPQTNFFPDLAKTSRTDIIFFCSPNNPTGH 184

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AAT+ QLEQLV+FA+ NGSIIIFDSAYAAY+TD  PRSI+EIPGAREVAIE+SSFSKF+G
Sbjct: 185 AATRQQLEQLVKFAKENGSIIIFDSAYAAYITDDSPRSIFEIPGAREVAIEVSSFSKFAG 244

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTG+RLGWTVVPEEL FS+GFPVINDFNRI+CTCFNGAS+IAQ GGLACLS EG  AV S
Sbjct: 245 FTGIRLGWTVVPEELSFSNGFPVINDFNRIVCTCFNGASSIAQVGGLACLSPEGFAAVCS 304

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           + DYYKEN KIL++T ASLG+KVYGG NAPY+W HFPG KSWDVF EILE+THI TVPGS
Sbjct: 305 ITDYYKENAKILLNTFASLGLKVYGGKNAPYLWVHFPGSKSWDVFTEILERTHIITVPGS 364

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGP GEE++R+  FGHRESILEA+RRLE L+
Sbjct: 365 GFGPAGEEFMRVCAFGHRESILEAARRLENLY 396

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224155798|ref|XP_002337640.1| predicted protein [Populus trichocarpa] gi|222839791|gb|EEE78114.1| predicted protein [Populus trichocarpa]

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 213/272 (78%), Positives = 240/272 (88%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AY+DSSVI+GQAGD ED+   Y NIEY++C P  NFFPDL  TSRTDIIFFCSPNNPTGH
Sbjct: 123 AYVDSSVIIGQAGDFEDKSRMYGNIEYMKCVPQTNFFPDLAKTSRTDIIFFCSPNNPTGH 182

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AAT+ QLEQLV+FA+ NGSIIIFDSAYAAY+TD  PRSI+EIPGAREVAIE+SSFSKF+G
Sbjct: 183 AATRQQLEQLVKFAKENGSIIIFDSAYAAYITDDSPRSIFEIPGAREVAIEVSSFSKFAG 242

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTG+RLGWTVVPEEL FS+GFPVINDFNRI+CTCFNGAS+IAQ GGLACLS EG  AV S
Sbjct: 243 FTGIRLGWTVVPEELSFSNGFPVINDFNRIVCTCFNGASSIAQVGGLACLSPEGFAAVCS 302

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           + DYYKEN KIL++T ASLG+KVYGG NAPY+W HFPG KSWDVF EILE+THI TVPGS
Sbjct: 303 ITDYYKENAKILLNTFASLGLKVYGGKNAPYLWVHFPGSKSWDVFTEILERTHIITVPGS 362

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGP GEE++R+  FGHRESILEA+RRLE L+
Sbjct: 363 GFGPAGEEFMRVCAFGHRESILEAARRLENLY 394

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587391|ref|XP_002534257.1| Aspartate aminotransferase, putative [Ricinus communis] gi|223525633|gb|EEF28127.1| Aspartate aminotransferase, putative [Ricinus communis]

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 214/272 (78%), Positives = 242/272 (88%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AYID+SVI+GQAG+ ED  G+Y +IEY++C P NNFFPDL  TSRTDIIFFCSPNNPTGH
Sbjct: 168 AYIDTSVIIGQAGNFEDRSGRYGDIEYMKCEPQNNFFPDLAKTSRTDIIFFCSPNNPTGH 227

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AAT+ QLE+LV FA+ NGSIIIFDSAYA Y+T+  PRSI+EIPGAREVAIE+SSFSKF+G
Sbjct: 228 AATRRQLEELVRFAKENGSIIIFDSAYALYITNDSPRSIFEIPGAREVAIEVSSFSKFAG 287

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTV+PEEL FS+GFPVINDFNRI+CTCFNGASNIAQAGGLACLS+EG  AV S
Sbjct: 288 FTGVRLGWTVIPEELHFSNGFPVINDFNRIVCTCFNGASNIAQAGGLACLSAEGFMAVRS 347

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
            VDYYKEN K+LI+ LASLG+K YGG NAPYVW HFPG KSW+VF EILEK HI TVPGS
Sbjct: 348 KVDYYKENAKLLIEALASLGLKAYGGENAPYVWVHFPGSKSWEVFDEILEKAHIITVPGS 407

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGEE+IRIS FGH+E+ILEAS+RL+ LF
Sbjct: 408 GFGPGGEEFIRISAFGHKETILEASKRLKHLF 439

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134126|ref|XP_002327762.1| predicted protein [Populus trichocarpa] gi|222836847|gb|EEE75240.1| predicted protein [Populus trichocarpa]

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 208/272 (76%), Positives = 239/272 (87%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AY+DSSVI+GQAGD ED+ G Y  I+Y++C P  NFFPDL   SR+DIIFFCSPNNPTGH
Sbjct: 125 AYVDSSVIIGQAGDFEDKTGMYGKIQYMKCLPKTNFFPDLATASRSDIIFFCSPNNPTGH 184

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AAT+ QLEQLV+FA+ NGSIIIFDSAYAAY++D  PRSI+EIPGAREVAIE+SSFSKF+G
Sbjct: 185 AATRQQLEQLVKFAKENGSIIIFDSAYAAYISDDSPRSIFEIPGAREVAIEVSSFSKFAG 244

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTG+RLGWTVVPEEL FS+GFPVINDFNRI+CTCFNGASNIAQAGGLACLS EG  +VHS
Sbjct: 245 FTGIRLGWTVVPEELSFSNGFPVINDFNRIVCTCFNGASNIAQAGGLACLSPEGFASVHS 304

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           ++  YKEN KIL DT +SLG+KVYGG NAPY+W HFPG KSWD+F EILEKTHI TVPGS
Sbjct: 305 IIKCYKENAKILRDTFSSLGLKVYGGENAPYLWVHFPGSKSWDIFTEILEKTHIITVPGS 364

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGP GEE++RIS FGH+ESI+EA+RRL  L+
Sbjct: 365 GFGPEGEEFMRISAFGHKESIIEAARRLGNLY 396

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525892|ref|XP_003531555.1| PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Glycine max]

 Score =  452 bits (1162), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/271 (77%), Positives = 241/271 (88%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AYIDSSVI+GQAG   D+ GKY NIEY+ CGP ++FFPDL   SRT++IFF SPNNPTGH
Sbjct: 173 AYIDSSVIIGQAGKFVDKAGKYKNIEYMTCGPQSDFFPDLPTISRTELIFFNSPNNPTGH 232

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AAT+ QLEQLV+FA+ NGSIIIFDSAY+AY+TD  P+SIYEIPGAREVAIE+SSFSKF+G
Sbjct: 233 AATRKQLEQLVDFAKVNGSIIIFDSAYSAYITDDSPKSIYEIPGAREVAIEVSSFSKFAG 292

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTVVPEELL+S+GFPV++DFNRI+CTCFNGASNIAQAGGLACLS EGL A+ +
Sbjct: 293 FTGVRLGWTVVPEELLYSNGFPVVHDFNRIMCTCFNGASNIAQAGGLACLSPEGLRAMQT 352

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           +VDYY EN +IL+D L SLG+ VYGG NAPYVW HFPG KSW+VFAEILEKTHI TVPGS
Sbjct: 353 LVDYYMENARILVDALTSLGLTVYGGKNAPYVWVHFPGSKSWNVFAEILEKTHIITVPGS 412

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEAL 271
           GFGPGGEEYIRIS FG R+SI+EAS+RL+ L
Sbjct: 413 GFGPGGEEYIRISAFGQRDSIIEASKRLKYL 443

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638340|gb|ACU19482.1| unknown [Glycine max]

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 209/271 (77%), Positives = 240/271 (88%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AYIDSSVI+GQAG   D+ GKY NIEY+ CGP ++FFPDL   SRT++IFF SPNNPTGH
Sbjct: 16  AYIDSSVIIGQAGKFVDKAGKYKNIEYMTCGPQSDFFPDLPTISRTELIFFNSPNNPTGH 75

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AAT+ QLEQLV+FA+ NGSIIIFDSAY+AY+TD  P+SIYEIPGAREVAIE+SSFSKF+G
Sbjct: 76  AATRKQLEQLVDFAKVNGSIIIFDSAYSAYITDDSPKSIYEIPGAREVAIEVSSFSKFAG 135

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTVVPEELL+S+GFPV++DFNRI+CTCFNGASNIAQAGGLACLS EGL A+ +
Sbjct: 136 FTGVRLGWTVVPEELLYSNGFPVVHDFNRIMCTCFNGASNIAQAGGLACLSPEGLRAMQT 195

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           +VDYY EN +IL+D L SLG+ VYGG NAPYVW HFPG KSW+VFAEILEKTHI TVPGS
Sbjct: 196 LVDYYMENARILVDALTSLGLTVYGGKNAPYVWVHFPGSKSWNVFAEILEKTHIITVPGS 255

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEAL 271
           GFGPGGEE IRIS FG R+SI+EAS+RL+ L
Sbjct: 256 GFGPGGEECIRISAFGQRDSIIEASKRLKYL 286

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297831860|ref|XP_002883812.1| hypothetical protein ARALYDRAFT_480324 [Arabidopsis lyrata subsp. lyrata] gi|297329652|gb|EFH60071.1| hypothetical protein ARALYDRAFT_480324 [Arabidopsis lyrata subsp. lyrata]

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 201/272 (73%), Positives = 234/272 (86%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AYIDSSVI+GQ G   +   KY N+ Y+ CGP N+FFPDL  T RTD+IFFCSPNNPTG+
Sbjct: 168 AYIDSSVIIGQTGHFHEPTKKYQNVVYMPCGPKNSFFPDLAMTPRTDVIFFCSPNNPTGY 227

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
            A++ QL QLV+FA+ NGSIIIFDSAYAA++ D  PRSIYEIPGAREVAIE+SSFSKF+G
Sbjct: 228 VASRKQLHQLVDFAKRNGSIIIFDSAYAAFIEDDSPRSIYEIPGAREVAIEVSSFSKFAG 287

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWT++P+ELL+S+GFP+INDF+RI+ T FNGASNIAQAGGLACLSS GL+ + S
Sbjct: 288 FTGVRLGWTIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQAGGLACLSSGGLKEIRS 347

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           V DYYKEN KIL+DTL SLG+KVYGG+NAPY+W HF G KSWDVFAEILE THI TVPGS
Sbjct: 348 VNDYYKENRKILMDTLVSLGLKVYGGVNAPYLWVHFKGSKSWDVFAEILENTHIITVPGS 407

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGEEY+RISGFG RE I+EAS+RL+  F
Sbjct: 408 GFGPGGEEYLRISGFGRREDIVEASKRLQNFF 439

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063177|ref|XP_002301028.1| predicted protein [Populus trichocarpa] gi|222842754|gb|EEE80301.1| predicted protein [Populus trichocarpa]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 201/272 (73%), Positives = 236/272 (86%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AYID+SVIVGQ+G LE++ GKY +I Y+ CG  NNFFPDL  T RTD+IFFCSPNNPTG 
Sbjct: 125 AYIDTSVIVGQSGKLEEKTGKYSDIVYMNCGAENNFFPDLSTTPRTDVIFFCSPNNPTGS 184

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AA+  QL+QLV+FA+ NGSII++DSAYAAY++D  PRSI+EIPGA+EVAIEISSFSKF+G
Sbjct: 185 AASWKQLKQLVDFAKTNGSIIVYDSAYAAYISDESPRSIFEIPGAKEVAIEISSFSKFAG 244

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTVVPEEL +S+GFPVI DFNRI+CTCFNGASNI QAGGLACLS +G +AV +
Sbjct: 245 FTGVRLGWTVVPEELKYSNGFPVIEDFNRIVCTCFNGASNIVQAGGLACLSRDGYQAVCN 304

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           VVDYYKEN KIL++  ASLG+KVYGG NAPYVW HFPG  SW+VF EILEKTH+ TVPG 
Sbjct: 305 VVDYYKENAKILVEAFASLGLKVYGGKNAPYVWVHFPGMSSWNVFNEILEKTHVVTVPGR 364

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGEEYIR+S F HRE+++EAS R++ LF
Sbjct: 365 GFGPGGEEYIRVSAFSHRENMMEASLRMKKLF 396

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
TAIR|locus:2040481	456	ALD1 "AGD2-like defense respon	1.0	0.596	0.727	3.3e-111
TAIR|locus:2134243	461	AGD2 "ABERRANT GROWTH AND DEAT	1.0	0.590	0.705	6.3e-108
UNIPROTKB|Q74GT3	410	dapL "LL-diaminopimelate amino	0.977	0.648	0.452	1.3e-61
TIGR_CMR|GSU_0162	410	GSU_0162 "aromatic aminotransf	0.977	0.648	0.452	1.3e-61
TIGR_CMR|CHY_0115	392	CHY_0115 "putative aspartate a	0.860	0.596	0.296	3.3e-24
TIGR_CMR|CHY_1492	390	CHY_1492 "putative aspartate a	0.834	0.582	0.319	4.2e-24
UNIPROTKB|Q81MJ3	392	BAS3945 "Aminotransferase, cla	0.838	0.581	0.317	5.6e-22
TIGR_CMR|BA_4254	392	BA_4254 "aminotransferase, cla	0.838	0.581	0.317	5.6e-22
TIGR_CMR|DET_0739	388	DET_0739 "aminotransferase, cl	0.801	0.561	0.299	1.5e-21
UNIPROTKB|Q81K72	396	BAS4771 "Aminotransferase, cla	0.801	0.550	0.310	2.6e-20

TAIR|locus:2040481 ALD1 "AGD2-like defense response protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1098 (391.6 bits), Expect = 3.3e-111, P = 3.3e-111
 Identities = 198/272 (72%), Positives = 235/272 (86%)

Query:     1 AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
             AYIDSSVI+GQ G   ++  KY N+ Y+ CGP N+FFPDL  T RTD+IFFCSPNNPTG+
Sbjct:   168 AYIDSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDLAMTPRTDVIFFCSPNNPTGY 227

Query:    61 AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
              A++ QL QLV+FA+ NGSIIIFDSAYAA++ DG PRSIYEIPGAREVAIE+SSFSKF+G
Sbjct:   228 VASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAG 287

Query:   121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
             FTGVRLGW+++P+ELL+S+GFP+INDF+RI+ T FNGASNIAQAGGLACLSS GL+ + S
Sbjct:   288 FTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQAGGLACLSSGGLKEIRS 347

Query:   181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
             V +YYKEN KIL+DTL SLG+KVYGG+NAPY+W HF G KSWDVF EILE THI TVPGS
Sbjct:   348 VNNYYKENRKILMDTLVSLGLKVYGGVNAPYLWVHFKGSKSWDVFNEILENTHIITVPGS 407

Query:   241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
             GFGPGGEEY+RISGFG R+ I+EAS+RL+  F
Sbjct:   408 GFGPGGEEYLRISGFGRRDHIVEASKRLQNFF 439

GO:0003824 "catalytic activity" evidence=IEA

GO:0008483 "transaminase activity" evidence=ISS;IDA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009089 "lysine biosynthetic process via diaminopimelate" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0010285 "L,L-diaminopimelate aminotransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:2134243 AGD2 "ABERRANT GROWTH AND DEATH 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
 Identities = 192/272 (70%), Positives = 225/272 (82%)

Query:     1 AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
             AY+DSSVI+GQ G    +V KY NIEY+ C P N FFPDL    RTDIIFFCSPNNPTG 
Sbjct:   189 AYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGA 248

Query:    61 AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
             AAT+ QL QLVEFA+ NGSII++DSAYA Y++D  PRSI+EIPGA EVA+E +SFSK++G
Sbjct:   249 AATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAG 308

Query:   121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
             FTGVRLGWTV+P++LL+S GFPV  DFNRIICTCFNGASNI+QAG LACL+ EGLEA+H 
Sbjct:   309 FTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHK 368

Query:   181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
             V+ +YKENT I+IDT  SLG  VYGG NAPYVW HFP + SWDVFAEILEKTH+ T PGS
Sbjct:   369 VIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGS 428

Query:   241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
             GFGPGGE ++R+S FGHRE+ILEA RR + L+
Sbjct:   429 GFGPGGEGFVRVSAFGHRENILEACRRFKQLY 460

GO:0003824 "catalytic activity" evidence=IEA

GO:0008483 "transaminase activity" evidence=ISS;IDA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009089 "lysine biosynthetic process via diaminopimelate" evidence=IEA;IGI

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0010285 "L,L-diaminopimelate aminotransferase activity" evidence=IEA;IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

UNIPROTKB|Q74GT3 dapL "LL-diaminopimelate aminotransferase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 124/274 (45%), Positives = 177/274 (64%)

Query:     2 YIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHA 61
             Y D++V++G+ G+ +D+ G Y  I Y+ C   N F P L  T + DII+ C PNNPTG  
Sbjct:   135 YNDTNVMIGRTGEADDK-GYYKGIVYMPCTEENGFIPSLP-TEKVDIIYLCFPNNPTGTV 192

Query:    62 ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSG 120
             AT+ +L++ V++A  N ++I FD+AY A++TD   P SIYEI GA++ AIE  SFSK +G
Sbjct:   193 ATKAELKKWVDYAIANDAVIFFDAAYEAFITDPAIPHSIYEIEGAKKCAIEFRSFSKTAG 252

Query:   121 FTGVRLGWTVVPEELLFSSGFPVINDFNRI----ICTCFNGASNIAQAGGLACLSSEGLE 176
             FTGVR G  VVPEE++ ++       FN++      T FNGAS   Q    A  S EG +
Sbjct:   253 FTGVRCGLVVVPEEVMGTTPTGEKYSFNKLWLRRTTTKFNGASYPVQKAAAAVYSDEGWQ 312

Query:   177 AVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHIT 235
                 ++DYY EN +I+ + LA+ G+ VYGG+NAPY+W   PG   SWD F ++L + ++ 
Sbjct:   313 QNKEIIDYYMENARIIREGLAAAGLTVYGGVNAPYIWLKTPGGMSSWDFFDKLLNECNVV 372

Query:   236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269
               PGSGFGP GE + R+S FGHRE+++EA  R++
Sbjct:   373 GTPGSGFGPSGEGFFRLSAFGHRENVIEAVERIK 406

GO:0008150 "biological_process" evidence=ND

GO:0008483 "transaminase activity" evidence=ISS

TIGR_CMR|GSU_0162 GSU_0162 "aromatic aminotransferase, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 124/274 (45%), Positives = 177/274 (64%)

Query:     2 YIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHA 61
             Y D++V++G+ G+ +D+ G Y  I Y+ C   N F P L  T + DII+ C PNNPTG  
Sbjct:   135 YNDTNVMIGRTGEADDK-GYYKGIVYMPCTEENGFIPSLP-TEKVDIIYLCFPNNPTGTV 192

Query:    62 ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSG 120
             AT+ +L++ V++A  N ++I FD+AY A++TD   P SIYEI GA++ AIE  SFSK +G
Sbjct:   193 ATKAELKKWVDYAIANDAVIFFDAAYEAFITDPAIPHSIYEIEGAKKCAIEFRSFSKTAG 252

Query:   121 FTGVRLGWTVVPEELLFSSGFPVINDFNRI----ICTCFNGASNIAQAGGLACLSSEGLE 176
             FTGVR G  VVPEE++ ++       FN++      T FNGAS   Q    A  S EG +
Sbjct:   253 FTGVRCGLVVVPEEVMGTTPTGEKYSFNKLWLRRTTTKFNGASYPVQKAAAAVYSDEGWQ 312

Query:   177 AVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHIT 235
                 ++DYY EN +I+ + LA+ G+ VYGG+NAPY+W   PG   SWD F ++L + ++ 
Sbjct:   313 QNKEIIDYYMENARIIREGLAAAGLTVYGGVNAPYIWLKTPGGMSSWDFFDKLLNECNVV 372

Query:   236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269
               PGSGFGP GE + R+S FGHRE+++EA  R++
Sbjct:   373 GTPGSGFGPSGEGFFRLSAFGHRENVIEAVERIK 406

GO:0008150 "biological_process" evidence=ND

GO:0008483 "transaminase activity" evidence=ISS

TIGR_CMR|CHY_0115 CHY_0115 "putative aspartate aminotransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 74/250 (29%), Positives = 126/250 (50%)

Query:    27 YLECGPGNNF--FPDLKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
             Y+   P N F   P+L     T ++ I+  C PNNPTG   T + L +L+     +  ++
Sbjct:   141 YIRTRPENGFKLTPELLEEAITPKSKILLLCYPNNPTGAVMTADDLAKLLPVIAEHDLLV 200

Query:    82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF 141
             I D  YA    +G   S+   PG +E  + ++ FSK    TG RLG+   P+E++  +  
Sbjct:   201 ISDEIYAELTYEGKHVSVASFPGMKERTVILNGFSKAFAMTGWRLGYAAGPKEII--AAM 258

Query:   142 PVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI 201
               I+ +  ++C     A   AQ   +  L ++  +AV  +V+ Y    +IL++  + +G+
Sbjct:   259 TKIHQYT-MLC-----APITAQKAAIEALKNQN-DAVKKMVEEYNYRRRILVEAFSEMGL 311

Query:   202 KVYGGINAPYVWAHFPGRK-SWDVFAE-ILEKTHITTVPGSGFGPGGEEYIRISGFGHRE 259
              ++    A Y +        S + FAE +L +  +  VPGS FGP GE +IRIS    R+
Sbjct:   312 WLFEPKGAFYAFPDISATGLSSEEFAERLLFEEKVAVVPGSAFGPSGEGFIRISYATARK 371

Query:   260 SILEASRRLE 269
              ++EA +R++
Sbjct:   372 DLIEALKRIK 381

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0006532 "aspartate biosynthetic process" evidence=ISS

TIGR_CMR|CHY_1492 CHY_1492 "putative aspartate aminotransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 79/247 (31%), Positives = 114/247 (46%)

Query:    32 PGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA 86
             P N F PDL         +  ++F   PNNPTG  A     E++V FA+    ++  D+A
Sbjct:   147 PENGFLPDLDSIPEEVARKAKLMFINYPNNPTGAVADLGFFEKVVHFAKKYEILVCHDAA 206

Query:    87 YAAYVTDG--CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI 144
             Y+    DG   P S  E+ GA++V IE  S SK    TG R+GW V             I
Sbjct:   207 YSEITFDGYRAP-SFLEVKGAKDVGIEFHSLSKTYNMTGWRIGWAV--------GNAKAI 257

Query:   145 NDFNRIICTCFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASLGIKV 203
             +   R+     +G     Q  G+  L  EG  + V  + D Y +   ++I+TL  LG  +
Sbjct:   258 DALGRLKSNIDSGVFQAIQYAGIKAL--EGPQDVVKELCDLYAQRRDLVIETLNKLGWNL 315

Query:   204 YGGINAPYVWAHFPGRKSWDVFAE-ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESIL 262
                    Y+WA  P   +   FAE ++EK  +   PG+G+G  GE Y RIS       + 
Sbjct:   316 SKPKGTFYIWAPVPKGFTSASFAEYLIEKAGVVITPGNGYGTNGEGYFRISLTIPTSRLK 375

Query:   263 EASRRLE 269
             EA +R+E
Sbjct:   376 EALQRIE 382

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0006532 "aspartate biosynthetic process" evidence=ISS

UNIPROTKB|Q81MJ3 BAS3945 "Aminotransferase, classes I and II" [Bacillus anthracis (taxid:1392)]

 Score = 257 (95.5 bits), Expect = 5.6e-22, P = 5.6e-22
 Identities = 78/246 (31%), Positives = 119/246 (48%)

Query:    34 NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88
             NNF PD          R  ++F   PNNPTG  A+++  ++ + FA  +  +++ D AY 
Sbjct:   152 NNFLPDYTKIDDSIAERAKLMFLNYPNNPTGATASKDFFDETIHFANKHNILVVHDFAYG 211

Query:    89 AYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDF 147
             A   DG  P S  +  GA++  IEI + SK     G R+ + V  E ++ +    ++ D 
Sbjct:   212 AIGFDGQKPVSFLQADGAKDTGIEIYTLSKTFNMAGWRIAFAVGNESVIETIN--LLQD- 268

Query:   148 NRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI 207
               +  + F GA  I  A   A LSS+    V  +V+ Y+     LI    S+G  V    
Sbjct:   269 -HMYVSIF-GA--IQDAAREALLSSQS--CVIDLVNSYESRRNALISACHSIGWNVDIPT 322

Query:   208 NAPYVWAHFPGRKSWDVFAEIL-EKTHITTVPGSGFGPGGEEYIRISGFGHRESIL-EAS 265
              + + W   P   + + F++IL EK H+   PG GFG  GE Y+R+ G  H E  L EA 
Sbjct:   323 GSFFAWLPVPEGYTSEQFSDILLEKAHVAVAPGVGFGEHGEGYVRV-GLLHTEDRLREAI 381

Query:   266 RRLEAL 271
              R++ L
Sbjct:   382 NRIDKL 387

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_4254 BA_4254 "aminotransferase, classes I and II" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 257 (95.5 bits), Expect = 5.6e-22, P = 5.6e-22
 Identities = 78/246 (31%), Positives = 119/246 (48%)

Query:    34 NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88
             NNF PD          R  ++F   PNNPTG  A+++  ++ + FA  +  +++ D AY 
Sbjct:   152 NNFLPDYTKIDDSIAERAKLMFLNYPNNPTGATASKDFFDETIHFANKHNILVVHDFAYG 211

Query:    89 AYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDF 147
             A   DG  P S  +  GA++  IEI + SK     G R+ + V  E ++ +    ++ D 
Sbjct:   212 AIGFDGQKPVSFLQADGAKDTGIEIYTLSKTFNMAGWRIAFAVGNESVIETIN--LLQD- 268

Query:   148 NRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI 207
               +  + F GA  I  A   A LSS+    V  +V+ Y+     LI    S+G  V    
Sbjct:   269 -HMYVSIF-GA--IQDAAREALLSSQS--CVIDLVNSYESRRNALISACHSIGWNVDIPT 322

Query:   208 NAPYVWAHFPGRKSWDVFAEIL-EKTHITTVPGSGFGPGGEEYIRISGFGHRESIL-EAS 265
              + + W   P   + + F++IL EK H+   PG GFG  GE Y+R+ G  H E  L EA 
Sbjct:   323 GSFFAWLPVPEGYTSEQFSDILLEKAHVAVAPGVGFGEHGEGYVRV-GLLHTEDRLREAI 381

Query:   266 RRLEAL 271
              R++ L
Sbjct:   382 NRIDKL 387

GO:0008150 "biological_process" evidence=ND

GO:0008483 "transaminase activity" evidence=ISS

TIGR_CMR|DET_0739 DET_0739 "aminotransferase, classes I and II" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 253 (94.1 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 70/234 (29%), Positives = 104/234 (44%)

Query:    27 YLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
             Y+     NNF PD         S+  I++   PNNPTG  A  +  ++  EFA  +   +
Sbjct:   142 YMPLNKENNFLPDFNAIPQDVLSKAKILWINYPNNPTGAVAGLDFFKEAAEFAAKHNLAV 201

Query:    82 IFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG 140
               D  Y+    DG  P S  E  GA+EV IE  S SK    TG R+G  V          
Sbjct:   202 CHDGPYSEIAFDGYRPVSFLEADGAKEVGIEFHSLSKSYNMTGWRIGMAV--------GN 253

Query:   141 FPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG 200
               +I+   R      +G     Q   +A L+    + +      Y+     L++ L ++G
Sbjct:   254 AKMIDALRRFKSNLDSGIPQAIQLMAIAALNGSQ-DVISQNCAVYQRRRDRLVEALRNIG 312

Query:   201 IKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS 253
             ++V     + Y+WA  P G  S     E+L+KT +   PG+G+G  GE YIR+S
Sbjct:   313 MEVTAPKASLYIWAPVPEGYTSASFATELLDKTGVVVTPGTGYGTSGEGYIRLS 366

GO:0008152 "metabolic process" evidence=ISS

GO:0008483 "transaminase activity" evidence=ISS

UNIPROTKB|Q81K72 BAS4771 "Aminotransferase, class I/II" [Bacillus anthracis (taxid:1392)]

 Score = 243 (90.6 bits), Expect = 2.6e-20, P = 2.6e-20
 Identities = 71/229 (31%), Positives = 108/229 (47%)

Query:    43 TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
             T++T  I  CSPNNPTG    +++LE++         I++ D  YA  V D    S   I
Sbjct:   161 TAKTKAILLCSPNNPTGAMLNKSELEEIAVIVEKYNLIVLSDEIYAELVYDEAYTSFASI 220

Query:   103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162
                RE  I IS FSK    TG RLG    P  + FS     I+ ++ ++C     A  ++
Sbjct:   221 KNMREHTILISGFSKGFAMTGWRLGMIAAP--VYFSELMLKIHQYS-MMC-----APTMS 272

Query:   163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--GRK 220
             Q   L  L + G + V  + D YK+    +  +   +G+  +    A YV+      G  
Sbjct:   273 QFAALEALRA-GNDEVIRMRDSYKKRRNFMTTSFNEMGLTCHVPGGAFYVFPSISSTGLS 331

Query:   221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269
             S +   ++L +  +  VPGS FG  GE +IR S     E ++EA +R+E
Sbjct:   332 SAEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLMEAMKRME 380

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZQI7	ALD1_ARATH	2, ., 6, ., 1, ., -	0.7279	1.0	0.5964	yes	no
Q6MDE0	DAPAT_PARUW	2, ., 6, ., 1, ., 8, 3	0.5444	0.9889	0.6545	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	0.921
3rd Layer	2.6.1.83	0.914

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00031581001	SubName- Full=Chromosome chr12 scaffold_57, whole genome shotgun sequence; (419 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00023128001	SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (370 aa)	•					•	•		0.977
	GSVIVG00007398001	SubName- Full=Putative uncharacterized protein (Chromosome chr16 scaffold_189, whole genome sho [...] (302 aa)						•	•		0.929
	GSVIVG00034770001	SubName- Full=Chromosome chr5 scaffold_72, whole genome shotgun sequence; (100 aa)						•			0.899
	GSVIVG00026365001	SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (363 aa)	•						•		0.556

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	272
PRK07590	409	PRK07590, PRK07590, L,L-diaminopimelate aminotrans	1e-124
TIGR03542	402	TIGR03542, DAPAT_plant, LL-diaminopimelate aminotr	1e-117
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	6e-59
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	9e-56
PRK09276	385	PRK09276, PRK09276, LL-diaminopimelate aminotransf	4e-41
TIGR03540	383	TIGR03540, DapC_direct, LL-diaminopimelate aminotr	2e-39
PRK05764	393	PRK05764, PRK05764, aspartate aminotransferase; Pr	2e-36
PRK08068	389	PRK08068, PRK08068, transaminase; Reviewed	6e-35
PRK07682	378	PRK07682, PRK07682, hypothetical protein; Validate	4e-31
PRK07337	388	PRK07337, PRK07337, aminotransferase; Validated	9e-31
PRK07681	399	PRK07681, PRK07681, aspartate aminotransferase; Pr	5e-27
PRK08361	391	PRK08361, PRK08361, aspartate aminotransferase; Pr	4e-26
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	1e-25
PRK06290	410	PRK06290, PRK06290, aspartate aminotransferase; Pr	7e-25
PRK05942	394	PRK05942, PRK05942, aspartate aminotransferase; Pr	8e-25
COG0079	356	COG0079, HisC, Histidinol-phosphate/aromatic amino	2e-24
PRK06108	382	PRK06108, PRK06108, aspartate aminotransferase; Pr	2e-23
PRK07683	387	PRK07683, PRK07683, aminotransferase A; Validated	1e-22
PRK08175	395	PRK08175, PRK08175, aminotransferase; Validated	2e-22
PRK09148	405	PRK09148, PRK09148, aminotransferase; Validated	2e-22
PRK08636	403	PRK08636, PRK08636, aspartate aminotransferase; Pr	3e-20
PRK06348	384	PRK06348, PRK06348, aspartate aminotransferase; Pr	5e-20
PRK07550	386	PRK07550, PRK07550, hypothetical protein; Provisio	1e-19
TIGR01141	346	TIGR01141, hisC, histidinol-phosphate aminotransfe	5e-19
PRK07366	388	PRK07366, PRK07366, succinyldiaminopimelate transa	2e-17
PRK07309	391	PRK07309, PRK07309, aromatic amino acid aminotrans	5e-17
PRK06836	394	PRK06836, PRK06836, aspartate aminotransferase; Pr	9e-17
TIGR03539	357	TIGR03539, DapC_actino, succinyldiaminopimelate tr	2e-16
COG1167	459	COG1167, ARO8, Transcriptional regulators containi	9e-16
PRK08960	387	PRK08960, PRK08960, hypothetical protein; Provisio	2e-15
TIGR03537	350	TIGR03537, DapC, succinyldiaminopimelate transamin	5e-15
TIGR03538	393	TIGR03538, DapC_gpp, succinyldiaminopimelate trans	7e-15
PRK05957	389	PRK05957, PRK05957, aspartate aminotransferase; Pr	2e-14
PRK03321	352	PRK03321, PRK03321, putative aminotransferase; Pro	2e-14
PRK07324	373	PRK07324, PRK07324, transaminase; Validated	7e-14
PRK06225	380	PRK06225, PRK06225, aspartate aminotransferase; Pr	2e-13
PRK07777	387	PRK07777, PRK07777, aminotransferase; Validated	3e-13
PRK07568	397	PRK07568, PRK07568, aspartate aminotransferase; Pr	4e-13
PRK06358	354	PRK06358, PRK06358, threonine-phosphate decarboxyl	2e-12
TIGR03947	359	TIGR03947, viomycin_VioD, capreomycidine synthase	6e-12
PRK00950	361	PRK00950, PRK00950, histidinol-phosphate aminotran	8e-12
PRK09147	396	PRK09147, PRK09147, succinyldiaminopimelate transa	7e-11
PRK02731	367	PRK02731, PRK02731, histidinol-phosphate aminotran	1e-10
TIGR01140	330	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phospha	2e-10
PRK12414	384	PRK12414, PRK12414, putative aminotransferase; Pro	2e-10
PRK07865	364	PRK07865, PRK07865, N-succinyldiaminopimelate amin	3e-10
PLN00175	413	PLN00175, PLN00175, aminotransferase family protei	5e-10
PRK08912	387	PRK08912, PRK08912, hypothetical protein; Provisio	8e-10
PRK05166	371	PRK05166, PRK05166, histidinol-phosphate aminotran	1e-09
PRK01688	351	PRK01688, PRK01688, histidinol-phosphate aminotran	2e-09
TIGR01265	403	TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine	2e-09
PRK08363	398	PRK08363, PRK08363, alanine aminotransferase; Vali	4e-09
PRK03158	359	PRK03158, PRK03158, histidinol-phosphate aminotran	4e-09
PRK14809	357	PRK14809, PRK14809, histidinol-phosphate aminotran	5e-09
PRK01533	366	PRK01533, PRK01533, histidinol-phosphate aminotran	9e-09
PRK03317	368	PRK03317, PRK03317, histidinol-phosphate aminotran	1e-08
PRK13355	517	PRK13355, PRK13355, bifunctional HTH-domain contai	1e-08
PRK09082	386	PRK09082, PRK09082, methionine aminotransferase; V	2e-08
PRK09265	404	PRK09265, PRK09265, aminotransferase AlaT; Validat	2e-08
PRK09105	370	PRK09105, PRK09105, putative aminotransferase; Pro	2e-08
PRK08354	311	PRK08354, PRK08354, putative aminotransferase; Pro	9e-08
PRK14807	351	PRK14807, PRK14807, histidinol-phosphate aminotran	9e-08
COG1168	388	COG1168, MalY, Bifunctional PLP-dependent enzyme w	9e-08
PRK03967	337	PRK03967, PRK03967, histidinol-phosphate aminotran	4e-07
PRK05839	374	PRK05839, PRK05839, hypothetical protein; Provisio	4e-07
PRK09440	416	PRK09440, avtA, valine--pyruvate transaminase; Pro	2e-06
COG3977	417	COG3977, COG3977, Alanine-alpha-ketoisovalerate (o	2e-06
PRK08056	356	PRK08056, PRK08056, threonine-phosphate decarboxyl	6e-06
PRK04635	354	PRK04635, PRK04635, histidinol-phosphate aminotran	7e-06
TIGR01264	401	TIGR01264, tyr_amTase_E, tyrosine aminotransferase	8e-06
PRK06855	433	PRK06855, PRK06855, aminotransferase; Validated	1e-05
TIGR04350	384	TIGR04350, C_S_lyase_PatB, putative C-S lyase	2e-05
PRK06107	402	PRK06107, PRK06107, aspartate aminotransferase; Pr	2e-05
PRK09275	527	PRK09275, PRK09275, aspartate aminotransferase; Pr	4e-05
PRK04870	356	PRK04870, PRK04870, histidinol-phosphate aminotran	5e-05
PRK14808	335	PRK14808, PRK14808, histidinol-phosphate aminotran	1e-04
PRK08153	369	PRK08153, PRK08153, histidinol-phosphate aminotran	1e-04
PLN03026	380	PLN03026, PLN03026, histidinol-phosphate aminotran	1e-04
PLN00143	409	PLN00143, PLN00143, tyrosine/nicotianamine aminotr	2e-04
COG0075	383	COG0075, COG0075, Serine-pyruvate aminotransferase	3e-04
PRK05664	330	PRK05664, PRK05664, threonine-phosphate decarboxyl	3e-04
PTZ00377	481	PTZ00377, PTZ00377, alanine aminotransferase; Prov	4e-04
TIGR03801	521	TIGR03801, asp_4_decarbox, aspartate 4-decarboxyla	4e-04
PTZ00376	404	PTZ00376, PTZ00376, aspartate aminotransferase; Pr	5e-04
PRK07908	349	PRK07908, PRK07908, hypothetical protein; Provisio	7e-04
PRK06425	332	PRK06425, PRK06425, histidinol-phosphate aminotran	0.001
PRK06207	405	PRK06207, PRK06207, aspartate aminotransferase; Pr	0.002
PRK05387	353	PRK05387, PRK05387, histidinol-phosphate aminotran	0.003
PRK07392	360	PRK07392, PRK07392, threonine-phosphate decarboxyl	0.003

>gnl|CDD|181053 PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated

 Score =  359 bits (923), Expect = e-124
 Identities = 130/278 (46%), Positives = 177/278 (63%), Gaps = 8/278 (2%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
            Y+D++V+ G+ G+  +E G+Y  I YL C   NNF P+L    + DII+ C PNNPTG 
Sbjct: 134 VYVDTNVMAGRTGEA-NEDGRYSGIVYLPCTAENNFVPELP-EEKVDIIYLCFPNNPTGT 191

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFS 119
             T+ QL+  V++A+ NGS+I+FD+AY A+++D   P SIYEI GARE AIE  SFSK +
Sbjct: 192 VLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTA 251

Query: 120 GFTGVRLGWTVVPEELLF----SSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL 175
           GFTG R  +TVVP+EL        G  + + +NR   T FNG S I Q    A  S EG 
Sbjct: 252 GFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGK 311

Query: 176 EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI 234
             +  ++DYY EN KI+ + L S G +VYGG+NAPY+W   P G  SWD F ++L++ ++
Sbjct: 312 AQIKELIDYYMENAKIIREGLESAGFEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANV 371

Query: 235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272
              PGSGFGP GE Y R+S FG RE++LEA  R++   
Sbjct: 372 VGTPGSGFGPSGEGYFRLSAFGSRENVLEAMERIKKAL 409

Length = 409

>gnl|CDD|163316 TIGR03542, DAPAT_plant, LL-diaminopimelate aminotransferase

 Score =  340 bits (875), Expect = e-117
 Identities = 139/270 (51%), Positives = 183/270 (67%), Gaps = 3/270 (1%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AY+DS+V+ G+AG L+D+ G+Y  I YL C   NNF P+L      DII+ CSPNNPTG 
Sbjct: 130 AYLDSNVMAGRAGVLDDD-GRYSKITYLPCTAENNFIPELPEEPHIDIIYLCSPNNPTGT 188

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFS 119
             T+ QL++LV++A  +GS+I+FD+AY+A+++D   P SI+EIPGAR  AIE  SFSK +
Sbjct: 189 VLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGARFCAIEFRSFSKTA 248

Query: 120 GFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVH 179
           GFTGVRLGWTVVP+EL ++ G  VI D+ R  CT FNGAS   Q    A  + EGL+ + 
Sbjct: 249 GFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAGYAGEGLQPIL 308

Query: 180 SVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHITTVP 238
             + YY EN +IL   L + G KVYGG +APY+W   P G  SWD F  +L + H+   P
Sbjct: 309 EAISYYMENARILRKALEAAGFKVYGGEHAPYLWVKTPEGISSWDFFDFLLYEYHVVGTP 368

Query: 239 GSGFGPGGEEYIRISGFGHRESILEASRRL 268
           GSGFGP GE ++R S FG RE+I+EA  R+
Sbjct: 369 GSGFGPSGEGFVRFSAFGKRENIIEACERI 398

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Length = 402

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  192 bits (489), Expect = 6e-59
 Identities = 89/252 (35%), Positives = 125/252 (49%), Gaps = 18/252 (7%)

Query: 32  PGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA 86
             N F PDL+      T +T  I   SPNNPTG   ++ +L+ +VE AR +  III D  
Sbjct: 145 EENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEI 204

Query: 87  YAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN 145
           Y   V DG    SI E+ GAR+  I I+SFSK  G TG R+GW V P E L       I 
Sbjct: 205 YEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEEL-------IA 257

Query: 146 DFNRIICTCFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASL-GIKV 203
              ++     + A   AQ   +A L+     E V  + + Y+E   +L++ L  + G+ V
Sbjct: 258 ALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSV 317

Query: 204 YGGIN-APYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGFGHRES 260
                 A Y++   P    S +   ++LE+  +  VPGSGFG P GE Y+R+S     E+
Sbjct: 318 VKPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEET 377

Query: 261 ILEASRRLEALF 272
           + EA RRL    
Sbjct: 378 LEEALRRLARFL 389

Length = 393

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score =  182 bits (464), Expect = 9e-56
 Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 14/254 (5%)

Query: 23  CNIEYLECGPGNNFFPD-----LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77
             +  +       F  D        T +T +++  +PNNPTG   ++ +LE+L E A+ +
Sbjct: 105 AEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKH 164

Query: 78  GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF 137
           G +II D AYA  V DG P     +  A E  I + SFSK  G  G+R+G+ + P E L 
Sbjct: 165 GILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEEL- 223

Query: 138 SSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA 197
                 +    +++    +G S ++QA   A L  +G E +  + + Y+     L++ L 
Sbjct: 224 ------LERLKKLLPYTTSGPSTLSQAAAAAAL-DDGEEHLEELRERYRRRRDALLEALK 276

Query: 198 SLG-IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG 256
            LG + V       ++W   P     +    +L +  +   PGS FG GGE ++R+S   
Sbjct: 277 ELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFAT 336

Query: 257 HRESILEASRRLEA 270
             E + EA  RL  
Sbjct: 337 PEEELEEALERLAE 350

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|181749 PRK09276, PRK09276, LL-diaminopimelate aminotransferase; Provisional

 Score =  145 bits (367), Expect = 4e-41
 Identities = 82/247 (33%), Positives = 117/247 (47%), Gaps = 16/247 (6%)

Query: 32  PGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA 86
             N F PDL         +  ++F   PNNPTG  A     E++V+FA+    I+  D+A
Sbjct: 148 EENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAA 207

Query: 87  YAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN 145
           Y+    DG  P S  E+PGA++V IE  S SK    TG R+G+ V   +L        I 
Sbjct: 208 YSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADL--------IA 259

Query: 146 DFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG 205
              ++     +G     Q  G+A L+    E V  +   Y+E   IL++ L  LG++V  
Sbjct: 260 GLGKVKSNVDSGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKLGLEVEP 318

Query: 206 GINAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEA 264
                YVWA  P G  S +    +L+K  +   PG+GFG  GE Y RI+     E I EA
Sbjct: 319 PKATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEA 378

Query: 265 SRRLEAL 271
             R++ L
Sbjct: 379 VERIKKL 385

Length = 385

>gnl|CDD|234250 TIGR03540, DapC_direct, LL-diaminopimelate aminotransferase

 Score =  140 bits (356), Expect = 2e-39
 Identities = 78/247 (31%), Positives = 111/247 (44%), Gaps = 16/247 (6%)

Query: 32  PGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA 86
             N F PD          +  ++F   PNNPTG  A     ++LVEFA+    I+  D+A
Sbjct: 146 EENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNA 205

Query: 87  YAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN 145
           Y+    DG    S  E+ GA++V IE  S SK    TG R+G  V   +L        I 
Sbjct: 206 YSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADL--------IA 257

Query: 146 DFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG 205
              ++     +G     Q   +A L+    + V  +   Y+    +L++ L  +GI V  
Sbjct: 258 GLGKVKTNVDSGVFQAIQYAAIAALNGPQ-DVVKEIRKIYQRRRDLLLEALKKIGIDVEK 316

Query: 206 GINAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEA 264
                YVW   P G  S +  A +LE+T +   PG GFG  GE YIRIS     E + EA
Sbjct: 317 PKATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEA 376

Query: 265 SRRLEAL 271
             R++ L
Sbjct: 377 VARIKKL 383

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia and the clade containing the Chlamydia gene is a neighboring one in the same pfam00155 superfamily so it seems quite reasonable that these enzymes catalyze the same transformation. Length = 383

>gnl|CDD|235596 PRK05764, PRK05764, aspartate aminotransferase; Provisional

 Score =  132 bits (336), Expect = 2e-36
 Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 25/260 (9%)

Query: 27  YLECGPGNNFFP---DLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
           ++  G  N F      L+   T +T  +   SP+NPTG   +  +LE + + A  +   +
Sbjct: 141 FVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWV 200

Query: 82  IFDSAYAAYVTDGCP-RSIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS 139
           + D  Y   V DG    SI  + P  R+  I ++ FSK    TG RLG+   P+EL    
Sbjct: 201 LSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKEL---- 256

Query: 140 GFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199
               I   +++     +  ++IAQ   +A L+    + V  +   ++E   +++D L  +
Sbjct: 257 ----IKAMSKLQSHSTSNPTSIAQYAAVAALNGP-QDEVEEMRQAFEERRDLMVDGLNEI 311

Query: 200 -GIKVYGGINAPYVWA---HFPGRKSWDV--FAE-ILEKTHITTVPGSGFGPGGEEYIRI 252
            G++      A YV+       G+   D   FAE +LE+  +  VPG  FG  G  Y+R+
Sbjct: 312 PGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPG--YVRL 369

Query: 253 SGFGHRESILEASRRLEALF 272
           S     E + E   R+E   
Sbjct: 370 SYATSLEDLEEGLERIERFL 389

Length = 393

>gnl|CDD|181219 PRK08068, PRK08068, transaminase; Reviewed

 Score =  128 bits (325), Expect = 6e-35
 Identities = 75/255 (29%), Positives = 110/255 (43%), Gaps = 36/255 (14%)

Query: 34  NNFFPDLKGTS-----RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88
           NNF PD          +  +++   PNNPTG  AT+   E+ V FA+ +   ++ D AY 
Sbjct: 151 NNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYG 210

Query: 89  AYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL----------LF 137
           A   DG  P S  + PGA++V IE+ + SK     G R+ + V  E +          LF
Sbjct: 211 AIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDHLF 270

Query: 138 SSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA 197
            S F  I D                 A   A LS +    V  +V  Y+      I    
Sbjct: 271 VSLFGAIQD-----------------AAIEALLSDQ--SCVAELVARYESRRNAFISACR 311

Query: 198 SLGIKVYGGINAPYVWAHFPGRKSWDVFAEI-LEKTHITTVPGSGFGPGGEEYIRISGFG 256
            +G +V     + + W   P   + + FA++ LEK H+   PG+GFG  GE Y+R+    
Sbjct: 312 EIGWEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT 371

Query: 257 HRESILEASRRLEAL 271
             E + EA  R+  L
Sbjct: 372 DEERLREAVERIGKL 386

Length = 389

>gnl|CDD|181082 PRK07682, PRK07682, hypothetical protein; Validated

 Score =  118 bits (298), Expect = 4e-31
 Identities = 71/232 (30%), Positives = 107/232 (46%), Gaps = 17/232 (7%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
           T++T  I  CSPNNPTG    +++LE++      +  I++ D  YA    D    S   I
Sbjct: 152 TAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASI 211

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162
            G RE  I IS FSK    TG RLG+   P           I+ ++ ++C     A  +A
Sbjct: 212 KGMRERTILISGFSKGFAMTGWRLGFIAAPVYFS--EAMLKIHQYS-MMC-----APTMA 263

Query: 163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSW 222
           Q   L  L + G + V  + D Y++     + +   +G+  +    A Y    FP   S 
Sbjct: 264 QFAALEALRA-GNDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPGGAFYA---FPSISST 319

Query: 223 DV----FAE-ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269
            +    FAE +L +  +  VPGS FG  GE +IR S     E + EA +R++
Sbjct: 320 GLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMK 371

Length = 378

>gnl|CDD|180937 PRK07337, PRK07337, aminotransferase; Validated

 Score =  117 bits (296), Expect = 9e-31
 Identities = 78/243 (32%), Positives = 102/243 (41%), Gaps = 29/243 (11%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
             RT  +   SP+NPTG +   ++L ++VE  R  G   I D  Y     D  P S   +
Sbjct: 161 GERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSL 220

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDF--NRIICTCFNGASN 160
               +  I I+SFSK+   TG RLGW VVPE L+             N  IC     AS 
Sbjct: 221 G---DDVITINSFSKYFNMTGWRLGWLVVPEALV-----GTFEKLAQNLFIC-----ASA 267

Query: 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY----GGINAPYVWA-- 214
           +AQ   LAC   + L         +K     ++  L SLG KV     G   A YV+A  
Sbjct: 268 LAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDG---AFYVYADC 324

Query: 215 ----HFPGRKSWDVFAEILEKTHITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLE 269
               H     S  +   +L    +  VPG  FGP    +YIR+S       + EA  RL 
Sbjct: 325 RGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLG 384

Query: 270 ALF 272
            LF
Sbjct: 385 KLF 387

Length = 388

>gnl|CDD|181081 PRK07681, PRK07681, aspartate aminotransferase; Provisional

 Score =  107 bits (269), Expect = 5e-27
 Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 18/245 (7%)

Query: 34  NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88
           N+F PDL+        +  ++    P NP    A ++  ++++ FA+ +  I++ D AYA
Sbjct: 150 NDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYA 209

Query: 89  AYVTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFS-SGFPVIND 146
            +  DG  P S   +PGA+EV +EI+S SK     G R+G+ +  EE++ + + F    D
Sbjct: 210 EFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNTD 269

Query: 147 FNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG 206
           +  +       A    + G   C  + G+         Y+E    L+D   + G  V   
Sbjct: 270 YG-VFLPIQKAACAALRNGAAFCEKNRGI---------YQERRDTLVDGFRTFGWNVDKP 319

Query: 207 INAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEAS 265
             + +VWA  P G  S      ++++ ++   PG  FGP GE ++RI+     E + +A 
Sbjct: 320 AGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAV 379

Query: 266 RRLEA 270
             +  
Sbjct: 380 ENIRN 384

Length = 399

>gnl|CDD|236248 PRK08361, PRK08361, aspartate aminotransferase; Provisional

 Score =  104 bits (262), Expect = 4e-26
 Identities = 77/245 (31%), Positives = 116/245 (47%), Gaps = 18/245 (7%)

Query: 34  NNFFPDL-----KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88
           N F PD        T RT +I    PNNPTG    +   + + + A +    I+ D  Y 
Sbjct: 150 NEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYE 209

Query: 89  AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN 148
            ++ +G  +    I  A +  I  +SFSK    TG RLG+ + PE+        VI D  
Sbjct: 210 HFLYEGA-KHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQ--------VIKDMI 260

Query: 149 RIICTCFNGASNIAQAGGLACL-SSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGG 206
           ++        ++  Q  G+  L S E  +AV  +   Y E  K+++  L  +  IKV+  
Sbjct: 261 KLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEP 320

Query: 207 INAPYVWAHFPGRK-SWDVFAE-ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEA 264
             A YV+A+      S + FAE +LEK  +  +PG+ FG  GE YIRIS    +E ++EA
Sbjct: 321 KGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEA 380

Query: 265 SRRLE 269
             R+E
Sbjct: 381 MERME 385

Length = 391

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  103 bits (259), Expect = 1e-25
 Identities = 58/252 (23%), Positives = 99/252 (39%), Gaps = 24/252 (9%)

Query: 29  ECGPGNNFFPDLKG--------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI 80
                N+F  D           T    ++   SP+NPTG  AT  +LE+L++ A+ +  +
Sbjct: 118 PLYSSNDFHLDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNIL 177

Query: 81  IIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS 139
           ++ D AYA +V       +   +       + + SFSK  G  G R+G+ +    ++  S
Sbjct: 178 LLVDEAYAGFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAAVI--S 235

Query: 140 GFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLA 197
               +    R   +     S   QA   A LS   L    +  +    KE    L D L 
Sbjct: 236 Q---LRKLARPFYS-----STHLQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLE 287

Query: 198 SLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGH 257
           + G+ V       ++        +  +   +LE+  +   PGS F  GG  ++RI+  G 
Sbjct: 288 AAGLSVLPSQAGFFLLTGLDPEAALALAQVLLEEVGVYVTPGSSF--GGPGWLRITVAGG 345

Query: 258 -RESILEASRRL 268
             E + E    +
Sbjct: 346 TEEELEELLEAI 357

Length = 357

>gnl|CDD|235772 PRK06290, PRK06290, aspartate aminotransferase; Provisional

 Score =  102 bits (255), Expect = 7e-25
 Identities = 84/258 (32%), Positives = 117/258 (45%), Gaps = 38/258 (14%)

Query: 34  NNFFPDLKGTS-----RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88
           NNF PDL         +  +++   PNNPTG  AT+   E++V+FA+ N  I++ D+AYA
Sbjct: 163 NNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYA 222

Query: 89  AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN 148
           A   DG P S   +PGA+EV +EI S SK    TG RL + VV  EL+    F  + D N
Sbjct: 223 ALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAF-VVGNELIV-KAFATVKDNN 280

Query: 149 RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY--GG 206
                  +G     Q  G+  L  +  E    + + Y      L+  L  +G K    GG
Sbjct: 281 D------SGQFIAIQKAGIYAL--DHPEITEKIREKYSRRLDKLVKILNEVGFKAEMPGG 332

Query: 207 INAPYVWAHFP-----GRK--SWDVFAEILEKTH-ITTVPGSGFGPGGEEYIRIS----- 253
               YV A  P     G K  + + F++ L K   I+TVP    G     ++R S     
Sbjct: 333 TFYLYVKA--PKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGH----FLRFSVTFEA 386

Query: 254 -GFGHRESIL-EASRRLE 269
                 + IL E  RRL 
Sbjct: 387 KDEEEEDRILEEIKRRLS 404

Length = 410

>gnl|CDD|180317 PRK05942, PRK05942, aspartate aminotransferase; Provisional

 Score =  101 bits (254), Expect = 8e-25
 Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 13/228 (5%)

Query: 45  RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIP 103
           +  I++F  P+NPT   A +   E++V FAR    +++ D  YA    DG  P S+ EIP
Sbjct: 170 QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIP 229

Query: 104 GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN-GASNIA 162
           GA+++ +E  + SK     G R+G+ V         G   I    R + T  + G  +  
Sbjct: 230 GAKDIGVEFHTLSKTYNMAGWRVGFVV---------GNRHIIQGLRTLKTNLDYGIFSAL 280

Query: 163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKS 221
           Q      L       +  V + Y+     LI  L  LG  +       Y+W   P G  S
Sbjct: 281 QKAAETALQLPD-SYLQQVQERYRTRRDFLIQGLGELGWNIPPTKATMYLWVPCPVGMGS 339

Query: 222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269
            D    +L+KT +   PG+ FG GGE Y+RIS     + + EA  RL+
Sbjct: 340 TDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLK 387

Length = 394

>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

 Score =  100 bits (251), Expect = 2e-24
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 23/227 (10%)

Query: 45  RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG 104
           +T ++F C+PNNPTG    + +L  L+E     G ++I D AY  +     P S  E+  
Sbjct: 145 KTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVI-DEAYIEF----SPESSLELLK 199

Query: 105 AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQA 164
                I + +FSK  G  G+R+G+ +   EL        I   N++    FN  S+ A A
Sbjct: 200 YPPNLIVLRTFSKAFGLAGLRVGYAIANPEL--------IAALNKVR-PPFN-VSSPALA 249

Query: 165 GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDV 224
             +A L     + +   V+  +E  + L   L +LG+       A +V    P  ++  +
Sbjct: 250 AAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFPSQANFVLVRVPDAEAAAL 307

Query: 225 FAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271
              +L+K  +     S        Y+RI+  G  E   E  R L AL
Sbjct: 308 AEALLKKGILVRDCSS--VGLLPGYLRIT-VGTPE---ENDRLLAAL 348

Length = 356

>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional

 Score = 97.7 bits (244), Expect = 2e-23
 Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 17/232 (7%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA--AYVTDGCPRSIY 100
           T RT  +F  SPNNPTG  A+++ L  ++   R +G  I+ D  Y    Y   G   S  
Sbjct: 156 TPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFL 215

Query: 101 EIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160
           +I    +  I ++SFSK    TG RLGW V P  L             ++I    +  + 
Sbjct: 216 DIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPAL--------GQVLEKLIEYNTSCVAQ 267

Query: 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR 219
             Q   +A L  EG + V  +V   + +   L+D L +L G++V     A Y +   PG 
Sbjct: 268 FVQRAAVAAL-DEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGV 326

Query: 220 KSWDVFA---EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRL 268
              D  A    ++++  +   PG+ FGPGGE ++R         + EA  RL
Sbjct: 327 T--DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERL 376

Length = 382

>gnl|CDD|236075 PRK07683, PRK07683, aminotransferase A; Validated

 Score = 95.6 bits (238), Expect = 1e-22
 Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 11/232 (4%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
           T +T  +    P+NPTG   ++ +L+ + +  ++    ++ D  Y+  V +    SI   
Sbjct: 159 TEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHF 218

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162
           P  RE  I I+  SK    TG R+G+   P  L  +     ++ +N    TC   AS+I+
Sbjct: 219 PEMREKTIVINGLSKSHSMTGWRIGFLFAPSYL--AKHILKVHQYN---VTC---ASSIS 270

Query: 163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--GRK 220
           Q   L  L++ G +    +   YK+    + + L S+G+ V     A Y++         
Sbjct: 271 QYAALEALTA-GKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLFPSIGHFTMS 329

Query: 221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           S+D   +++E+  +  VPGS F   GE Y+R+S     E++ E   RLEA  
Sbjct: 330 SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFL 381

Length = 387

>gnl|CDD|181268 PRK08175, PRK08175, aminotransferase; Validated

 Score = 95.2 bits (237), Expect = 2e-22
 Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 21/260 (8%)

Query: 24  NIEYLECGPGNNFFPDLKGTSRTDI-----IFFCSPNNPTGHAATQNQLEQLVEFARNNG 78
            +  +    G +FF +L+   R        +    P+NPT         E++V  A+   
Sbjct: 138 QVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYD 197

Query: 79  SIIIFDSAYAAYVTDG--CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
            +++ D AYA  V DG   P SI ++PGA++VA+E  + SK     G R+G+ V   EL 
Sbjct: 198 VLVVHDLAYADIVYDGWKAP-SIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPEL- 255

Query: 137 FSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL 196
                  ++   RI      G     Q   +A L  +  + V  + + YK    +L+  L
Sbjct: 256 -------VSALARIKSYHDYGTFTPLQVAAIAALEGDQ-QCVRDIAEQYKRRRDVLVKGL 307

Query: 197 ASLGIKVYGGINAPYVWAHFPGR----KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRI 252
              G  V     + YVWA  P       S +   ++L +  +   PG GFG  G+ ++R 
Sbjct: 308 HEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRF 367

Query: 253 SGFGHRESILEASRRLEALF 272
           +   +R+ I +A R ++A+F
Sbjct: 368 ALIENRDRIRQAIRGIKAMF 387

Length = 395

>gnl|CDD|181674 PRK09148, PRK09148, aminotransferase; Validated

 Score = 95.1 bits (237), Expect = 2e-22
 Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 19/258 (7%)

Query: 25  IEYLECGPGNNFFPDLKGTSRTDI-----IFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79
           I  +   P   FFP L+   R  I     +    P+NPT + A  +  + +V FA+ +  
Sbjct: 140 IRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDI 199

Query: 80  IIIFDSAYAA-YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFS 138
           II+ D AY+  Y     P S+ ++PGA++V +E +S SK     G R+G+ V  E L   
Sbjct: 200 IILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERL--- 256

Query: 139 SGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS 198
                I    R+      GA    Q    A L+    + +  + + YK+   +L+++   
Sbjct: 257 -----IAALTRVKSYLDYGAFTPIQVAATAALNGPQ-DCIAEMRELYKKRRDVLVESFGR 310

Query: 199 LGIKVYGGINAPYVWAHFPGR----KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG 254
            G  +     + + WA  P       S +    ++EK  +   PG GFG  G+ Y+RI+ 
Sbjct: 311 AGWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIAL 370

Query: 255 FGHRESILEASRRLEALF 272
             + + I +A+R ++   
Sbjct: 371 VENEQRIRQAARNIKRFL 388

Length = 405

>gnl|CDD|236316 PRK08636, PRK08636, aspartate aminotransferase; Provisional

 Score = 89.0 bits (221), Expect = 3e-20
 Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 35/251 (13%)

Query: 34  NNFFPDLKGTSRTDI-----IFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88
           + FF +L+   R        +    P+NPT     ++  E+LV  A+     II D AYA
Sbjct: 159 DQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYA 218

Query: 89  AYVTDG--CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND 146
               DG   P SI E+ GA++VA+E  + SK     G R+G+ V  ++L        +  
Sbjct: 219 DITFDGYKTP-SILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKL--------VGA 269

Query: 147 FNRI-------ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199
             +I       + T    A+ IA  G  +C        V  + + Y++   +LI++ A+ 
Sbjct: 270 LKKIKSWLDYGMFTPIQVAATIALDGDQSC--------VEEIRETYRKRRDVLIESFANA 321

Query: 200 GIKVYGGINAPYVWAHFP----GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF 255
           G ++     + +VWA  P       S +   ++L +  +   PG GFG  G+EY+RI+  
Sbjct: 322 GWELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI 381

Query: 256 GHRESILEASR 266
            +   I +A+R
Sbjct: 382 ENENRIRQAAR 392

Length = 403

>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional

 Score = 87.9 bits (218), Expect = 5e-20
 Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 18/235 (7%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA--YVTDGCPRSIY 100
           TS+T  I   SPNNPTG   ++  LE++ + A      II D  Y    +  D  P +  
Sbjct: 160 TSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATL 219

Query: 101 EIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160
              G  E  I   SFSK    TG R+G+ + P+ ++           N  IC     A  
Sbjct: 220 A--GMPERTITFGSFSKDFAMTGWRIGYVIAPDYII-----ETAKIINEGICF---SAPT 269

Query: 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHF 216
           I+Q   +  L       V  + + +++  +     + S+         G I A ++    
Sbjct: 270 ISQRAAIYALKHRD-TIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYA-FINIKK 327

Query: 217 PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271
            G  S +   ++L++ H+  +PG  FG  GE YIR++     E + EA  R+E +
Sbjct: 328 TGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382

Length = 384

>gnl|CDD|181026 PRK07550, PRK07550, hypothetical protein; Provisional

 Score = 86.9 bits (216), Expect = 1e-19
 Identities = 71/265 (26%), Positives = 99/265 (37%), Gaps = 38/265 (14%)

Query: 26  EYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI 80
            YL C  G    PD        T RT  I   +PNNPTG       L +L + AR +G  
Sbjct: 139 VYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIA 198

Query: 81  IIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS 139
           +I D  Y  + +  G P  ++  P   +  + + SFSK    TG R+G  V     +   
Sbjct: 199 LILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAE- 257

Query: 140 GFPVINDF--NRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKEN-------TK 190
               I  F     IC     A  I Q          GL  +    D+   N         
Sbjct: 258 ----IEKFMDTVAIC-----APRIGQIAVAW-----GLPNLA---DWRAGNRAEIARRRD 300

Query: 191 ILIDTLASLGIKVYGGINAPYVWAH--FPGRKSWDVFAEILEKTHITTVPGSGFGPGGEE 248
                 A L         A + +    FP R S +V   + ++  I  +PG+ FGPG E 
Sbjct: 301 AFRAVFARLPGWELLASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEG 360

Query: 249 YIRISGFGH--RESILEASRRLEAL 271
           Y+R++ F +     I E   RL A 
Sbjct: 361 YLRLA-FANADVAGIGELVERLRAF 384

Length = 386

>gnl|CDD|233290 TIGR01141, hisC, histidinol-phosphate aminotransferase

 Score = 85.0 bits (211), Expect = 5e-19
 Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 34/257 (13%)

Query: 23  CNIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77
              E ++     +   DL+        +  ++F CSPNNPTG+  +++ +E ++E    +
Sbjct: 115 HGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPED 174

Query: 78  GSIIIFDSAYAAY--VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL 135
             +++ D AY  +       P  + E P    + + + + SK  G  G+R+G+ +   E 
Sbjct: 175 A-LVVVDEAYGEFSGEPSTLPL-LAEYP---NLIV-LRTLSKAFGLAGLRIGYAIANAE- 227

Query: 136 LFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT 195
                  +I+  N++    FN  S +AQA  +A L  +    +   V+      + L D 
Sbjct: 228 -------IIDALNKVR-APFN-LSRLAQAAAIAALRDDDF--IEKTVEEINAERERLYDG 276

Query: 196 LASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG 254
           L  L G++VY   +A +V   FP      +F  +LEK  I  V      PG    +RI+ 
Sbjct: 277 LKKLPGLEVYPS-DANFVLIRFPRDAD-ALFEALLEKGII--VRDLNSYPGLPNCLRIT- 331

Query: 255 FGHRESILEASRRLEAL 271
            G RE   E  R L AL
Sbjct: 332 VGTRE---ENDRFLAAL 345

Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme [Amino acid biosynthesis, Histidine family]. Length = 346

>gnl|CDD|180947 PRK07366, PRK07366, succinyldiaminopimelate transaminase; Validated

 Score = 80.9 bits (200), Expect = 2e-17
 Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 23/249 (9%)

Query: 34  NNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88
           N+F P          ++  ++    P+NPT   A  +  ++ V F + +  +++ D  Y 
Sbjct: 149 NDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYV 208

Query: 89  AYVTDG--CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND 146
             V DG   P SI +    + V+IE  + SK     G R+G+ +   +L        I  
Sbjct: 209 DLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQL--------IQA 260

Query: 147 FNRIICTC-FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG 205
             ++     FN    I   G +A L+      V   V  +++     I+ L  +G  V  
Sbjct: 261 LRQVKAVVDFNQYRGILN-GAIAALTGPQ-ATVQQTVQIFRQRRDAFINALHQIGWPVPL 318

Query: 206 GINAPYVWAHFP---GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESIL 262
                YVWA  P      S +   +++ +T +   PGSGFG  GE Y+R +   H   IL
Sbjct: 319 PEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFA-LVHDPDIL 377

Query: 263 E-ASRRLEA 270
           E A  R+ A
Sbjct: 378 EEAVERIAA 386

Length = 388

>gnl|CDD|235985 PRK07309, PRK07309, aromatic amino acid aminotransferase; Validated

 Score = 79.8 bits (197), Expect = 5e-17
 Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 15/221 (6%)

Query: 54  PNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SIYEIPGAREVAIEI 112
           P NPTG   ++ Q++ L +  +     +I D  Y+     G P  SI E     +  I I
Sbjct: 175 PANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY--LPDQTILI 232

Query: 113 SSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS 172
           +  SK    TG R+G    P E        +I     ++      A+ +AQ   +  L++
Sbjct: 233 NGLSKSHAMTGWRIGLIFAPAEFTAQ----LIKSHQYLV----TAATTMAQFAAVEALTN 284

Query: 173 EGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP---GRKSWDVFAEIL 229
              +A+    +Y K    I I+ +  LG K+     A Y++A  P    + S+    +  
Sbjct: 285 GKDDALPMKKEYIKRRDYI-IEKMTDLGFKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFA 343

Query: 230 EKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA 270
            K  +  +PG+ FGP GE Y+R+S     E+I EA +RL+ 
Sbjct: 344 RKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKE 384

Length = 391

>gnl|CDD|180720 PRK06836, PRK06836, aspartate aminotransferase; Provisional

 Score = 78.7 bits (195), Expect = 9e-17
 Identities = 72/239 (30%), Positives = 95/239 (39%), Gaps = 39/239 (16%)

Query: 34  NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN----NGSII--I 82
           + F PDL       T +T  +   SPNNPTG   ++  L+ L           G  I  I
Sbjct: 152 DTFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLI 211

Query: 83  FDSAYAAYVTDGC--PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL----L 136
            D  Y   V DG   P     I    + +I + SFSK     G R+G+  V  E+     
Sbjct: 212 SDEPYREIVYDGAEVP----YIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADD 267

Query: 137 FSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL 196
             +        NRI    F  A  + Q     CL +         V  YK N  +L D L
Sbjct: 268 LVAALVFA---NRI--LGFVNAPALMQRVVAKCLDA------TVDVSIYKRNRDLLYDGL 316

Query: 197 ASLGIKVYGGINAPYVWAHFPGRKSWDV-FAEILEKTHITTVPGSGFG-PGGEEYIRIS 253
             LG +      A Y++   P     DV F E  +K ++  VPGSGFG PG   Y R+S
Sbjct: 317 TELGFECVKPQGAFYLFPKSPEED--DVAFCEKAKKHNLLLVPGSGFGCPG---YFRLS 370

Length = 394

>gnl|CDD|132578 TIGR03539, DapC_actino, succinyldiaminopimelate transaminase

 Score = 77.5 bits (191), Expect = 2e-16
 Identities = 64/246 (26%), Positives = 94/246 (38%), Gaps = 39/246 (15%)

Query: 38  PDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR 97
           P        D+I+  SP NPTG   + ++L  +V +AR  G+++  D  Y     +G P 
Sbjct: 135 PTELDPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPV 194

Query: 98  SIYEIP----GAREVAIEISSFSKFSGFTGVRLGWTV----VPEELLFS---SGF----P 142
           SI + P    G     + + S SK S   G R G+      +  ELL     +G     P
Sbjct: 195 SILD-PRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTVRKHAGLMVPAP 253

Query: 143 VINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202
           V                   QA  +A L  +G  A       Y      L   L   G +
Sbjct: 254 V-------------------QAAMVAALGDDGHVAEQ--KARYAARRAQLKPALEKAGFR 292

Query: 203 VYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESIL 262
           +       Y+WA   G  +WD    + E   I   PG  +GP G +++R++     E I 
Sbjct: 293 IDHSEAGLYLWAT-RGEDAWDTVDRLAELG-ILVAPGDFYGPAGSQHVRVALTATDERIA 350

Query: 263 EASRRL 268
            A  RL
Sbjct: 351 AAVARL 356

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 357

>gnl|CDD|224089 COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

 Score = 76.2 bits (188), Expect = 9e-16
 Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 31/239 (12%)

Query: 49  IFFCSPN--NPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRS--IYEIPG 104
             + +P   NPTG   +  + + L+  A     +II D  Y     DG P          
Sbjct: 229 AVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAP 288

Query: 105 AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQA 164
            R   I + SFSK +   G+RLG+ V P EL        I    R+      G S+++QA
Sbjct: 289 GR--VIYLGSFSK-TLAPGLRLGYVVAPPEL--------IEKLLRLKQAADLGPSSLSQA 337

Query: 165 GGLACLSSEGLEA-VHSVVDYYKENTKILIDTLASLGIKVY------GGINAPYVWAHFP 217
              A L S   +  +  +   Y      L++ LA    ++       GG+   ++W   P
Sbjct: 338 ALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGL---FLWLELP 394

Query: 218 -GRKSWDVFAEILEKTHITTVPGSGFGPGGEE--YIRISGFGH--RESILEASRRLEAL 271
            G  + ++ A  LEK  + T  GS F   G+    +R+  F     E I E  +RL AL
Sbjct: 395 EGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRL-SFSSPSEEEIEEGIKRLAAL 452

Length = 459

>gnl|CDD|181595 PRK08960, PRK08960, hypothetical protein; Provisional

 Score = 74.7 bits (184), Expect = 2e-15
 Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 39/234 (16%)

Query: 53  SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIE- 111
           SP NPTG   ++++L  L +  R  G  ++ D  Y            Y +  A  + ++ 
Sbjct: 173 SPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLT--------YGVDAASVLEVDD 224

Query: 112 ----ISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGL 167
               ++SFSK+ G TG RLGW V P           + +  ++    +  AS  AQ   L
Sbjct: 225 DAFVLNSFSKYFGMTGWRLGWLVAPPAA--------VPELEKLAQNLYISASTPAQHAAL 276

Query: 168 ACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-----NAPYVWAHFPGRKSW 222
           AC   E L  + +    +      L+  L  LG     GI      A Y++A        
Sbjct: 277 ACFEPETLAILEARRAEFARRRDFLLPALRELGF----GIAVEPQGAFYLYADI-SAFGG 331

Query: 223 DVFA---EILEKTHITTVPGSGFG---PGGEEYIRISGFGHRESILEASRRLEA 270
           D FA     LE  H+   PG  FG    G  +++R +       + EA  R+  
Sbjct: 332 DAFAFCRHFLETEHVAFTPGLDFGRHQAG--QHVRFAYTQSLPRLQEAVERIAR 383

Length = 387

>gnl|CDD|163313 TIGR03537, DapC, succinyldiaminopimelate transaminase

 Score = 73.4 bits (180), Expect = 5e-15
 Identities = 61/228 (26%), Positives = 91/228 (39%), Gaps = 14/228 (6%)

Query: 45  RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG 104
            T I++   P+NPTG  A ++ L++ +   R +G I+  D  Y        P S  E+  
Sbjct: 136 ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEV-- 193

Query: 105 AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS-NIAQ 163
             E  +   S SK SG TG R G         F +G   +  F R +   F  AS +  Q
Sbjct: 194 GIENVLAFHSLSKRSGMTGYRSG---------FVAGDEKLISFLRKLRANFGVASPDFVQ 244

Query: 164 AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWD 223
           A   A  S +    V      +K    + I+    +G++        Y+W   P      
Sbjct: 245 AAAKAAWSDD--NHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYLWVKVPSGIDAK 302

Query: 224 VFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271
            +A  L +  I   PG  FG G E Y+R++     E   EA R  E +
Sbjct: 303 DYALRLLENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWERV 350

The four sequences which make up the seed for this model are not closely related, although they are all members of the pfam00155 family of aminotransferases and are more closely related to each other than to anything else. Additionally, all of them are found in the vicinity of genes involved in the biosynthesis of lysine via the diaminopimelate pathway (GenProp0125), although this amount to a separation of 12 genes in the case of Sulfurihydrogenibium azorense Az-Fu1. None of these genomes contain another strong candidate for this role in the pathway. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade. Length = 350

>gnl|CDD|234249 TIGR03538, DapC_gpp, succinyldiaminopimelate transaminase

 Score = 73.6 bits (181), Expect = 7e-15
 Identities = 71/271 (26%), Positives = 109/271 (40%), Gaps = 46/271 (16%)

Query: 27  YLECGPGNNFFPDLKGTS-----RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
           +L C   N F PD          R  ++F CSP NPTG   + + L++L+E A   G II
Sbjct: 142 FLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFII 201

Query: 82  IFDSAYAA-YVTDGCPRSIYEIPGAREVAIEI-----------SSFSKFSGFTGVRLGWT 129
             D  Y+  Y  +G P       G  + A ++            S SK S   G+R G+ 
Sbjct: 202 ASDECYSELYFDEGNPP-----AGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFV 256

Query: 130 VVPEELLFSSGFPVINDFNRIICTCFNGASNIA-QAGGLACLSSEGLEAVHSVVDYYKEN 188
               E+L          F R   T    A  I  Q   +A  + E  + V      Y+E 
Sbjct: 257 AGDAEIL--------KAFLRYR-TYHGCAMPIPTQLASIAAWNDE--QHVRENRALYREK 305

Query: 189 TKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEIL-EKTHITTVPGS------- 240
              +++ L  + + +       Y+W   PG    + FA  L E+ ++T +PG        
Sbjct: 306 FAAVLEILGQV-LDLELPDAGFYLWPKVPGDD--EAFARALYEEENVTVLPGRFLAREAE 362

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEAL 271
           G  P GE  +RI+     E  +EA+ R+ + 
Sbjct: 363 GVNP-GEGRVRIALVAPLEECVEAAERIRSF 392

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 393

>gnl|CDD|235654 PRK05957, PRK05957, aspartate aminotransferase; Provisional

 Score = 72.4 bits (178), Expect = 2e-14
 Identities = 60/246 (24%), Positives = 91/246 (36%), Gaps = 40/246 (16%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SIYE 101
           T +T  I   SPNNPTG    +  L  + +    +G   I D AY  +  DG    S   
Sbjct: 158 TPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGS 217

Query: 102 IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161
           IPG+    I + S SK  GF   R+G+ V+P  LL +     I      I  C      +
Sbjct: 218 IPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEA-----IKKIQDTILIC---PPVV 269

Query: 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG---------------IKVYGG 206
           +Q   L  L   G       +    +  +IL+ +L  L                +KV   
Sbjct: 270 SQYAALGALQV-GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTD 328

Query: 207 INAPYVWAHFPGRKSWDVFAEILEKTH-ITTVPGSGFGPGGEEYIRIS-GFGHRESILEA 264
           +N                  + L + + +  +PG+ FG     Y+RI+ G   + +  E 
Sbjct: 329 LND-------------FELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEG 375

Query: 265 SRRLEA 270
             RL  
Sbjct: 376 IERLVQ 381

Length = 389

>gnl|CDD|179559 PRK03321, PRK03321, putative aminotransferase; Provisional

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 30/215 (13%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG-CPRSIYE 101
           T RT +IF C+PNNPTG   T  +L + ++ A     +++ D AY  YV D   P  + E
Sbjct: 143 TDRTRLIFVCNPNNPTGTVVTPAELARFLD-AVPADVLVVLDEAYVEYVRDDDVPDGL-E 200

Query: 102 IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161
           +       + + +FSK  G  G+R+G+ V   E++            R +   F   +++
Sbjct: 201 LVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVI---------AALRKVAVPF-SVNSL 250

Query: 162 AQAGGLACLSSEG--LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-G 218
           AQA  +A L++E   LE V +VV    E  ++    L + G  V     A +VW   P G
Sbjct: 251 AQAAAIASLAAEDELLERVDAVV---AERDRV-RAALRAAGWTVPPS-QANFVW--LPLG 303

Query: 219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS 253
            ++ D FA    +  +   P   F     E +R++
Sbjct: 304 ERTAD-FAAAAAEAGVVVRP---F---AGEGVRVT 331

Length = 352

>gnl|CDD|235989 PRK07324, PRK07324, transaminase; Validated

 Score = 70.4 bits (173), Expect = 7e-14
 Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 36/255 (14%)

Query: 24  NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78
            ++Y +    N + PDL          T +I   + NNPTG    +  LE++VE AR+  
Sbjct: 127 EVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVD 186

Query: 79  SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFS 138
           + ++ D  Y     DG   SI ++    E  I  +S SK     G+R+GW    EE++  
Sbjct: 187 AYVLSDEVYRPLDEDGSTPSIADL---YEKGISTNSMSKTYSLPGIRVGWIAANEEVIDI 243

Query: 139 SGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAV----HSVVDYYKENTKILID 194
                  D+  I    F+          LA L+ E  +A+      +V   + N  IL +
Sbjct: 244 --LRKYRDYTMICAGVFDDM--------LASLALEHRDAILERNRKIV---RTNLAILDE 290

Query: 195 -----TLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEY 249
                   S  +K      + +V        S D   ++L++T +  VPG+ F    E +
Sbjct: 291 WVAKEPRVSY-VKPKAVSTS-FVKLDVD-MPSEDFCLKLLKETGVLLVPGNRFDL--EGH 345

Query: 250 IRISGFGHRESILEA 264
           +RI G+      L+ 
Sbjct: 346 VRI-GYCCDTETLKK 359

Length = 373

>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional

 Score = 69.4 bits (170), Expect = 2e-13
 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 13/129 (10%)

Query: 44  SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIP 103
             T +I+   P NP G + T+ ++++  E AR+N + ++ D  Y  +  +    + Y   
Sbjct: 156 ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEY--- 212

Query: 104 GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ 163
            A E  +   SFSK  G  G+R+G  V   +L+      VIND          G + IAQ
Sbjct: 213 -APEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVINDL---------GTNVIAQ 262

Query: 164 AGGLACLSS 172
              +A L  
Sbjct: 263 EAAIAGLKV 271

Length = 380

>gnl|CDD|236095 PRK07777, PRK07777, aminotransferase; Validated

 Score = 68.5 bits (168), Expect = 3e-13
 Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 6/111 (5%)

Query: 32  PGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA 86
            G  F  DL       T RT  +   SP+NPTG   T  +L  + E A  +  ++I D  
Sbjct: 141 DGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEV 200

Query: 87  YAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
           Y   V DG     +  +PG RE  + ISS +K    TG ++GW   P  L+
Sbjct: 201 YEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLI 251

Length = 387

>gnl|CDD|181036 PRK07568, PRK07568, aspartate aminotransferase; Provisional

 Score = 68.3 bits (168), Expect = 4e-13
 Identities = 68/241 (28%), Positives = 100/241 (41%), Gaps = 22/241 (9%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYE 101
           T +T  I   +P NPTG   T+ +LE L E A+ +   +I D  Y  +V DG    S   
Sbjct: 160 TPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALS 219

Query: 102 IPGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160
           + G  +  I I S SK +S   G R+G  +   + L ++           +C        
Sbjct: 220 LEGLEDRVIIIDSVSKRYSA-CGARIGCLISKNKELIAAAMK--------LCQARLSPPT 270

Query: 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR 219
           + Q G  A L +        V + YK+   IL + L  + G+       A Y+ A  P  
Sbjct: 271 LEQIGAAALLDT-PESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPVD 329

Query: 220 KSWDVFAEILEKTHIT--TV---PGSGF--GPG-GEEYIRISGFGHRESILEASRRL-EA 270
            + D    +L   +    TV   P SGF   PG G+  IRI+   + E +  A   L EA
Sbjct: 330 DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILKEA 389

Query: 271 L 271
           L
Sbjct: 390 L 390

Length = 397

>gnl|CDD|180542 PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional

 Score = 65.8 bits (161), Expect = 2e-12
 Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 6/119 (5%)

Query: 23  CNIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78
             IEY E     NF  +           D++F C+PNNPTG   ++ +++++++      
Sbjct: 115 AEIEYAELTEETNFAANEIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRN 174

Query: 79  SIIIFDSAYAAYVTDGCPRS-IYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
             +I D A+  ++ +    S I  +   + + I I +F+KF    G+RLG+ +   + L
Sbjct: 175 IYLIIDEAFMDFLEENETISMINYLENFKNLII-IRAFTKFFAIPGLRLGYGLTSNKNL 232

Length = 354

>gnl|CDD|188462 TIGR03947, viomycin_VioD, capreomycidine synthase

 Score = 64.4 bits (157), Expect = 6e-12
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 7/110 (6%)

Query: 32  PGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA 86
               F PDL       T RT  +    P+NPTG + T  +L++L+E A  +G+++++D+A
Sbjct: 124 AVRGFRPDLDALRALLTPRTRAVVVNFPHNPTGASVTPRELDELLERAARSGAVLLWDNA 183

Query: 87  YAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
           +A  V D  P         R   I   + SK  G  G+R+GW V P +LL
Sbjct: 184 FADLVHDAPPLPDPSALYDR--VISFGTLSKAFGLPGLRVGWCVGPADLL 231

Members of this family are the enzyme capreomycidine synthase, which performs the second of two steps in the biosynthesis of 2S,3R-capreomycidine from arginine. Capreomycidine is an unusual amino acid used by non-ribosomal peptide synthases (NRPS) to make the tuberactinomycin class of peptide antibiotic. The best characterized member is VioD from the biosynthetic pathway for viomycin [Cellular processes, Biosynthesis of natural products]. Length = 359

>gnl|CDD|234872 PRK00950, PRK00950, histidinol-phosphate aminotransferase; Validated

 Score = 64.2 bits (157), Expect = 8e-12
 Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 32/215 (14%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
           T +T +IF C+PNNPTG+   +  + +++E   +  +++  D AY  +           +
Sbjct: 156 TEKTKVIFLCTPNNPTGNLIPEEDIRKILE---STDALVFVDEAYVEF----AEYDYTPL 208

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162
               +  I   +FSK  G  G+R+G+  VPE L        I+ + R   T F+  + ++
Sbjct: 209 ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWL--------IDYYMR-AKTPFS-LTRLS 258

Query: 163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSW 222
           QA  +A LS +  E +   +++  ++ + L +    L  KVY    A +V        + 
Sbjct: 259 QAAAIAALSDK--EYIEKSIEHGIKSREYLYN---ELPFKVYPS-EANFVLVDVTPMTAK 312

Query: 223 DVFAEILEKTHI----TTVPGSGFGPGGEEYIRIS 253
           +   E+L++  I    T+  G      G+ YIR+S
Sbjct: 313 EFCEELLKRGVIVRDCTSFRGL-----GDYYIRVS 342

Length = 361

>gnl|CDD|236393 PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional

 Score = 61.4 bits (150), Expect = 7e-11
 Identities = 75/288 (26%), Positives = 104/288 (36%), Gaps = 80/288 (27%)

Query: 27  YLECGPGNNFFPDLKGTS-----RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
           +L C P NNF PD          RT ++F CSP NPTG     +  ++L   +   G +I
Sbjct: 143 FLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVI 202

Query: 82  IFDSAYAA-YVTDGCPRSIYEIPGAREVAIEI-----------SSFSKFSGFTGVRLGWT 129
             D  Y+  Y  +  P       G  E A E+            S SK S   G+R    
Sbjct: 203 ASDECYSEIYFDEAAPP-----LGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLR---- 253

Query: 130 VVPEELLFSSGFPVINDFNRIIC------TCFNGASNIA-QAGGLACLSSEGLEAVHSVV 182
                    SGF V  D   ++       T    A   A QA  +A  + E     H V 
Sbjct: 254 ---------SGF-VAGD-AALLKKFLLYRTYHGCAMPPAVQAASIAAWNDE----AH-VR 297

Query: 183 D---YYKEN----TKILIDTLASLGIKVYGGINAP----YVWAHFPGRKSWDVFA-EILE 230
           +    Y+E     T IL   L          +  P    Y+WA  PG      FA  +  
Sbjct: 298 ENRALYREKFDAVTPILAPVL---------DVQLPDAGFYLWAKVPG--DDTEFARRLYA 346

Query: 231 KTHITTVPGS-------GFGPGGEEYIRISGFGHRESILEASRRLEAL 271
             ++T +PGS       G  P G   +RI+        +EA+ R+   
Sbjct: 347 DYNVTVLPGSYLAREAHGVNP-GAGRVRIALVAPLAECVEAAERIVDF 393

Length = 396

>gnl|CDD|235064 PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated

 Score = 60.9 bits (149), Expect = 1e-10
 Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 28/217 (12%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-GCPRSIYE 101
           T RT ++F  +PNNPTG      ++E+ +     +  +++ D AYA YV        + E
Sbjct: 152 TPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPD-VLVVLDEAYAEYVRRKDYEDGL-E 209

Query: 102 IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161
           +       +   +FSK  G  G+R+G+ + P E        +I+  NR+    FN  +++
Sbjct: 210 LVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPE--------IIDALNRVRQP-FN-VNSL 259

Query: 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV---YGGINAPYVWAHF-P 217
           A A  +A L  +    V        E    L + LA LG++     G  N  ++   F  
Sbjct: 260 ALAAAVAALDDD--AFVEKSRALNAEGMAWLTEFLAELGLEYIPSVG--N--FILVDFDD 313

Query: 218 GRKSWDVFAEILEKTHIT-TVPGSGFGPGGEEYIRIS 253
           G+ + + +  +L++  I   V G G  P     +RI+
Sbjct: 314 GKDAAEAYQALLKRGVIVRPVAGYGL-P---NALRIT 346

Length = 367

>gnl|CDD|233289 TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 53/233 (22%), Positives = 78/233 (33%), Gaps = 35/233 (15%)

Query: 44  SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIP 103
              D++  C+PNNPTG       L  L    R  G  ++ D A+  +  D    S+    
Sbjct: 124 EEADLLVVCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA---SLAPQA 180

Query: 104 GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF-----NGA 158
                 + + S +KF G  G+RLG+ V    L+              +         NG 
Sbjct: 181 ARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALI------------ARLREALGPWTVNG- 227

Query: 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGINAPYVWAHFP 217
              A A G A L+        +           L   LA LG ++V GG  A ++    P
Sbjct: 228 --PALAAGRAALADT--AWQAATRARLAAERARLAALLARLGGLRVVGG-TALFLLVRTP 282

Query: 218 GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA 270
              +     E L +  I       F      Y+R   F       E + RL  
Sbjct: 283 DAAAL---HEALARRGILIRDFDNFPGLDPRYLR---FALPTD--EENDRLLE 327

This family contains pyridoxal phosphate-binding class II aminotransferases (see pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 330

>gnl|CDD|183514 PRK12414, PRK12414, putative aminotransferase; Provisional

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 1/95 (1%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYE 101
           T RT +I   +P+NP+    +   L +L +  RN   +I+ D  Y   V DG    S+  
Sbjct: 160 TPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMAR 219

Query: 102 IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
                E ++ +SSF K    TG R+G+ + P EL+
Sbjct: 220 HRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELM 254

Length = 384

>gnl|CDD|236119 PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed

 Score = 59.5 bits (145), Expect = 3e-10
 Identities = 63/246 (25%), Positives = 93/246 (37%), Gaps = 43/246 (17%)

Query: 42  GTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYE 101
           G  R  +I+  SP+NPTG     + L ++V +AR  G+++  D  Y     D  P SI +
Sbjct: 145 GPQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILD 204

Query: 102 IP----GAREVAIEISSFSKFSGFTGVRLGWTV----VPEELLFS---SG----FPVIND 146
            P    G     + + S SK S   G R G+      +  ELL     +G     PV   
Sbjct: 205 -PRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEVRKHAGMMVPAPV--- 260

Query: 147 FNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG 206
                           QA  +A L  +    V    + Y     +L   L + G +V   
Sbjct: 261 ----------------QAAMVAALGDD--AHVREQRERYARRRAVLRPALEAAGFRVDHS 302

Query: 207 INAPYVWAHF--PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEA 264
               Y+WA        +    AE      I   PG  +GP G +++R++     E I  A
Sbjct: 303 EAGLYLWATRGEDCWDTVAWLAER----GILVAPGDFYGPAGAQHVRVALTATDERIAAA 358

Query: 265 SRRLEA 270
             RL A
Sbjct: 359 VERLAA 364

Length = 364

>gnl|CDD|215089 PLN00175, PLN00175, aminotransferase family protein; Provisional

 Score = 59.1 bits (143), Expect = 5e-10
 Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 26/210 (12%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
           TS+T  I   +P+NPTG   T+ +LE +    + N  +   D  Y     +G   S+  +
Sbjct: 185 TSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASL 244

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162
           PG  E  + ++S  K    TG ++GW + P  L  + G    + F              A
Sbjct: 245 PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL--TWGVRQAHSF-----------LTFA 291

Query: 163 QAGGLACLSSEGLEAVHSVVDYYKENTK-------ILIDTLASLGIKVYGGINAPYVWA- 214
            A  +   +   L A  S   YY+E  +       IL++ L  +G KVY      +V   
Sbjct: 292 TATPMQWAAVAALRAPES---YYEELKRDYSAKKDILVEGLKEVGFKVYPSSGTYFVMVD 348

Query: 215 HFP-GRKSWDVFAEIL-EKTHITTVPGSGF 242
           H P G ++   F E L E+  +  +P S F
Sbjct: 349 HTPFGFENDIAFCEYLIEEVGVAAIPPSVF 378

Length = 413

>gnl|CDD|181580 PRK08912, PRK08912, hypothetical protein; Provisional

 Score = 58.1 bits (141), Expect = 8e-10
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYE 101
           + RT  +   +P NP G    + +L  L EF + + ++ I D  +   V DG     +  
Sbjct: 157 SPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMT 216

Query: 102 IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
           +PG RE  ++I S  K    TG ++G+      LL
Sbjct: 217 LPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLL 251

Length = 387

>gnl|CDD|179950 PRK05166, PRK05166, histidinol-phosphate aminotransferase; Provisional

 Score = 57.8 bits (140), Expect = 1e-09
 Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 22/214 (10%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVT-DGCPRSIYE 101
                ++ F +P+NP G   T +QL ++++ A    ++I+ D AYA Y   D  P ++  
Sbjct: 157 ARAPRMLMFSNPSNPVGSWLTADQLARVLD-ATPPETLIVVDEAYAEYAAGDDYPSALTL 215

Query: 102 IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161
           +       I + +FSK  G  G+R+G+ +V +  L   G       +R+  T FN  +  
Sbjct: 216 LKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPEL--VGL-----LDRVR-TPFN-VNGA 266

Query: 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYV--WAHFPGR 219
           AQA  LA L  E  E +   V       + L   LA +G ++     AP    +  F  R
Sbjct: 267 AQAAALAALDDE--EHLAKGVALALAERERLKKELAEMGYRI-----APSRANFLFFDAR 319

Query: 220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS 253
           +     AE L +  +   P     PG E +IR+S
Sbjct: 320 RPASAVAEALLRQGVIVKPWK--QPGFETFIRVS 351

Length = 371

>gnl|CDD|234972 PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 43/225 (19%)

Query: 23  CNIEYLECGPGNNFFPDLKGT----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78
             +E       +N+  DL           +++ CSPNNPTG+      L  L+E  R   
Sbjct: 119 IGVEIRTVPTLDNWQLDLPAIADNLDGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGK- 177

Query: 79  SIIIFDSAYAAYVTDGCPRS--IYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
           +I++ D AY  +    CP++     +     + I + + SK     G+R G+T+  EE  
Sbjct: 178 AIVVADEAYIEF----CPQASLAGWLAEYPHLVI-LRTLSKAFALAGLRCGFTLANEE-- 230

Query: 137 FSSGFPVINDFNRIICTCFNGA--------SNIA-QAGGLACLSSEGLEAVHSVVDYYKE 187
                 VIN   ++I      A        ++IA QA     LS +G+ A+   V     
Sbjct: 231 ------VINLLLKVI------APYPLSTPVADIAAQA-----LSPQGIAAMRERVAEINA 273

Query: 188 NTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEK 231
           N + LI  L  +  ++        Y+ A F    S  VF  + ++
Sbjct: 274 NRQWLIAALKEIPCVEQVFDSETNYILARFT--ASSAVFKSLWDQ 316

Length = 351

>gnl|CDD|188123 TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine family aminotransferase

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 61/275 (22%), Positives = 104/275 (37%), Gaps = 32/275 (11%)

Query: 17  DEVGKYCNIE--YLECGPGNNFFPDLKGTS-----RTDIIFFCSPNNPTGHAATQNQLEQ 69
           D    +  +E    +  P  ++  DL G       +T  I   +P+NP G   +++ L++
Sbjct: 134 DTRAAFSGLEVRLYDLLPEKDWEIDLDGLESLADEKTVAIVVINPSNPCGSVFSRDHLQK 193

Query: 70  LVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAR---EV-AIEISSFSKFSGFTGVR 125
           + E A   G  II D  Y   V    P     IP A     V  + +   SK     G R
Sbjct: 194 IAEVAEKLGIPIIADEIYGHMVFGDAPF----IPMASFASIVPVLSLGGISKRWVVPGWR 249

Query: 126 LGWTVV--PEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVD 183
           LGW ++  P  +   +    + +  + I     G + I Q      L +   E     + 
Sbjct: 250 LGWIIIHDPHGIFRDTVLQGLKNLLQRIL----GPATIVQGALPDILENTPQEFFDGKIS 305

Query: 184 YYKENTKILIDTLASL-GIKVYGGINAPYVW-----AHFPGRKS-WDVFAEILEKTHITT 236
             K N ++  + L  + G+       A Y+        FP  K   D   ++  +  +  
Sbjct: 306 VLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLAREESVIC 365

Query: 237 VPGSGFG-PGGEEYIRISGFGHRESILEASRRLEA 270
           +PGS FG P    ++RI+       + EA  R++ 
Sbjct: 366 LPGSAFGLPN---WVRITITVPESMLEEACSRIKE 397

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley. Length = 403

>gnl|CDD|181402 PRK08363, PRK08363, alanine aminotransferase; Validated

 Score = 56.4 bits (136), Expect = 4e-09
 Identities = 63/249 (25%), Positives = 103/249 (41%), Gaps = 20/249 (8%)

Query: 34  NNFFPDL-----KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88
             + PD+     K T +T  I   +PNNPTG    +  L+++++ A  +   +I D  Y 
Sbjct: 150 EGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYD 209

Query: 89  AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWT--VVPEELLFSSGFPVIND 146
               +G   S   +     V I ++  SK    TG RLG+   V PE  L +     I+ 
Sbjct: 210 LMTYEGKHVSPGSLTKDVPV-IVMNGLSKVYFATGWRLGYIYFVDPEGKL-AEVREAIDK 267

Query: 147 FNRI-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVY 204
             RI +C      +  AQ   +A L+   ++ +   +   KE    +   L  + GI   
Sbjct: 268 LARIRLCP-----NTPAQFAAIAGLTGP-MDYLEEYMKKLKERRDYIYKRLNEIPGISTT 321

Query: 205 GGINAPYVWAHF---PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESI 261
               A Y++      P +   +   ++L + H+  V GSGFG  G  + R+      E +
Sbjct: 322 KPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEIL 381

Query: 262 LEASRRLEA 270
            EA  R E 
Sbjct: 382 EEAMDRFEE 390

Length = 398

>gnl|CDD|235106 PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 32/216 (14%)

Query: 45  RTDIIFFCSPNNPTG----HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIY 100
           +T I++ C+PNNPTG    H    + LE +         +++ D AY  YVT        
Sbjct: 151 QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHV-----LVVLDEAYYEYVTA--EDYPD 203

Query: 101 EIPGAREV--AIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA 158
            +P   +    I + +FSK  G   +R+G+ +  EEL        I   N I    FN  
Sbjct: 204 TLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEEL--------IEKLN-IARPPFN-T 253

Query: 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG 218
           + IAQ   +A L  +    +   V+   E  +         G+  Y      +++    G
Sbjct: 254 TRIAQYAAIAALEDQ--AFLKECVEKNAEGLEQYYAFCKEYGLFYYPS-QTNFIFVDT-G 309

Query: 219 RKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRIS 253
           R + ++F  +L+K +I    G+  G P G   +RI+
Sbjct: 310 RDANELFEALLKKGYIVR-SGAALGFPTG---VRIT 341

Length = 359

>gnl|CDD|184830 PRK14809, PRK14809, histidinol-phosphate aminotransferase; Provisional

 Score = 55.9 bits (135), Expect = 5e-09
 Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 16/136 (11%)

Query: 48  IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGARE 107
           I++  SP+NPTG     +++E L E   +  ++++ D AY  +     P ++  +    +
Sbjct: 157 IVYLTSPHNPTGSEIPLDEVEALAE-RTDEETLVVVDEAYGEFAER--PSAVALVEERDD 213

Query: 108 VAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGL 167
           VA+ + +FSK  G  G+RLG+ VVPEE  ++  +  +N       T F  AS +A   GL
Sbjct: 214 VAV-LRTFSKAYGLAGLRLGYAVVPEE--WADAYARVN-------TPF-AASELACRAGL 262

Query: 168 ACLSSEGLEAVHSVVD 183
           A L  +  E V   V+
Sbjct: 263 AALDDD--EHVERTVE 276

Length = 357

>gnl|CDD|134568 PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated

 Score = 55.0 bits (132), Expect = 9e-09
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 46  TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVT-DGCPRSIYEIPG 104
           T I++ C+PNNPTG      +L Q +E    N ++I+ D AY  YVT    P ++  +  
Sbjct: 152 TKIVWICNPNNPTGTYVNDRKLTQFIEGISEN-TLIVIDEAYYEYVTAKDFPETLPLLEK 210

Query: 105 AREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
            + + + + +FSK  G    R+G+ V  EEL+
Sbjct: 211 HKNILV-LRTFSKAYGLASFRVGYAVGHEELI 241

Length = 366

>gnl|CDD|235115 PRK03317, PRK03317, histidinol-phosphate aminotransferase; Provisional

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)

Query: 45  RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG 104
           R D++F  SPNNPTG A   + +E +++ A     I++ D AYA +   G P ++  +P 
Sbjct: 160 RPDVVFLTSPNNPTGTALPLDDVEAILDAAP---GIVVVDEAYAEFRRSGTPSALTLLPE 216

Query: 105 AREVAIEISSFSKFSGFTGVRLGW 128
              + +   + SK   F G RLG+
Sbjct: 217 YPRLVVS-RTMSKAFAFAGGRLGY 239

Length = 368

>gnl|CDD|237361 PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional

 Score = 55.1 bits (133), Expect = 1e-08
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 9/109 (8%)

Query: 30  CGPGNNFFPDL-----KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD 84
           C   + ++PD+     K TSRT  I   +PNNPTG    +  L+Q+V+ AR +  II  D
Sbjct: 261 CDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSD 320

Query: 85  SAYAAYVTDGCPR-SIYEIPGAREV-AIEISSFSKFSGFTGVRLGWTVV 131
             Y   V DG    SI  +  A ++  +  S  SK     G R+GW ++
Sbjct: 321 EIYDRLVMDGLEHTSIASL--APDLFCVTFSGLSKSHMIAGYRIGWMIL 367

Length = 517

>gnl|CDD|181642 PRK09082, PRK09082, methionine aminotransferase; Validated

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 1/94 (1%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYE 101
           + RT +I   +P+NP+G   +   +  L +        ++ D  Y   V DG    S+  
Sbjct: 161 SPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLR 220

Query: 102 IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL 135
            P  RE A  +SSF K    TG ++G+ V P  L
Sbjct: 221 HPELRERAFVVSSFGKTYHVTGWKVGYCVAPAAL 254

Length = 386

>gnl|CDD|181738 PRK09265, PRK09265, aminotransferase AlaT; Validated

 Score = 54.0 bits (131), Expect = 2e-08
 Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 30/122 (24%)

Query: 27  YLECGPGNNFFPDL-----KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
           YL C     +FPDL     K T RT  I   +PNNPTG   ++  LE++VE AR +  II
Sbjct: 146 YL-CDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLII 204

Query: 82  IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSK------FSGFT------GVRLGWT 129
             D  Y   + DG             V I I+S +       F+G +      G R+GW 
Sbjct: 205 FADEIYDKILYDG------------AVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWM 252

Query: 130 VV 131
           V+
Sbjct: 253 VL 254

Length = 404

>gnl|CDD|181651 PRK09105, PRK09105, putative aminotransferase; Provisional

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 20/157 (12%)

Query: 48  IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGARE 107
           +I+ C+PNNPTG    +  +E L+   +  GS+++ D AY  + +D  P S+ ++   R+
Sbjct: 168 LIYICNPNNPTGTVTPRADIEWLLA-NKPAGSVLLVDEAYIHF-SDA-P-SVVDLVAQRK 223

Query: 108 VAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGL 167
             I + +FSK  G  G+RLG      +LL            ++     N     A A GL
Sbjct: 224 DLIVLRTFSKLYGMAGMRLGLAAARPDLL-----------AKLARFGHNPLPVPAAAAGL 272

Query: 168 ACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY 204
           A L    L     V     EN  +  DT+A L  K Y
Sbjct: 273 ASLRDPKL-----VPQRRAENAAVREDTIAWLKKKGY 304

Length = 370

>gnl|CDD|169399 PRK08354, PRK08354, putative aminotransferase; Provisional

 Score = 52.0 bits (125), Expect = 9e-08
 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 7/98 (7%)

Query: 45  RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG 104
           R  ++FFC+PNNP G      +L+ L++   +  +++I D A+  +V         E P 
Sbjct: 117 RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKK------PESPE 170

Query: 105 AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFP 142
             E  I++ +F+K  G  G+R+G+    EE   S   P
Sbjct: 171 G-ENIIKLRTFTKSYGLPGIRVGYVKGFEEAFRSVRMP 207

Length = 311

>gnl|CDD|184829 PRK14807, PRK14807, histidinol-phosphate aminotransferase; Provisional

 Score = 52.2 bits (125), Expect = 9e-08
 Identities = 44/185 (23%), Positives = 88/185 (47%), Gaps = 24/185 (12%)

Query: 48  IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGARE 107
           ++F C+PNNPTG    +  + +++E +R    I++ D AY  +  +    +I ++    E
Sbjct: 151 LVFLCNPNNPTGSVIEREDIIKIIEKSR---GIVVVDEAYFEFYGN----TIVDVINEFE 203

Query: 108 VAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGL 167
             I + + SK  G  G+R+G+ V  E +L          +  ++ + +N  ++++Q   L
Sbjct: 204 NLIVLRTLSKAFGLAGLRVGYAVANENIL---------KYLNLVKSPYN-INSLSQVIAL 253

Query: 168 ACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFA 226
             L +     +   V+Y     + LI  L+ + GIKVY      ++   F  + +  V+ 
Sbjct: 254 KVLRT---GVLKERVNYILNERERLIKELSKIPGIKVYPS-KTNFILVKF--KDADYVYQ 307

Query: 227 EILEK 231
            +LE+
Sbjct: 308 GLLER 312

Length = 351

>gnl|CDD|224090 COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

 Score = 51.9 bits (125), Expect = 9e-08
 Identities = 49/243 (20%), Positives = 92/243 (37%), Gaps = 29/243 (11%)

Query: 44  SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SIYEI 102
            R  +   C+P+NPTG   T+ +L ++ E    +G  +I D  +A  V  G        +
Sbjct: 157 ERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASL 216

Query: 103 -PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161
                + +I ++S SK     G++  + ++    L +     +        +     +  
Sbjct: 217 SERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATE 276

Query: 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP---Y-VWAHF- 216
           A         ++G   +  +++Y K+N   + D L      V   +  P   Y  W    
Sbjct: 277 A-------AYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGV--KVTEPQGTYLAWLDCR 327

Query: 217 ------PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESIL-EASRRLE 269
                      +     +LE+  +   PGS FG  G  ++R++ F    +IL EA  RL+
Sbjct: 328 ELGLDDSELAEF-----LLEEAKVALSPGSTFGEEGSGFVRLN-FACPRAILEEALERLK 381

Query: 270 ALF 272
              
Sbjct: 382 RAL 384

Length = 388

>gnl|CDD|167650 PRK03967, PRK03967, histidinol-phosphate aminotransferase; Provisional

 Score = 50.1 bits (120), Expect = 4e-07
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 44  SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIP 103
                +F CSPNNPTG+   + ++ +++E  +     ++ D AYA +        I E P
Sbjct: 139 KNASAVFICSPNNPTGNLQPEEEILKVLETGKP----VVLDEAYAEFSGKSLIGLIDEYP 194

Query: 104 GAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
                 I + +FSK  G  G+R G+ +  EE++
Sbjct: 195 N----LILLRTFSKAFGLAGIRAGYAIANEEII 223

Length = 337

>gnl|CDD|180281 PRK05839, PRK05839, hypothetical protein; Provisional

 Score = 50.1 bits (120), Expect = 4e-07
 Identities = 61/263 (23%), Positives = 100/263 (38%), Gaps = 44/263 (16%)

Query: 27  YLECGPGNNFFPDL--KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD 84
            +     N+F P L  K     D++   SPNNPTG   +  +L + V+ A  +  I+I D
Sbjct: 135 LMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILIND 194

Query: 85  SAYAAYVTDGCPRSIYEIP---GAREV--AIEISSFSKFSGFTGVRLGWTVVPEELLFSS 139
             Y+    +  P S+ E     G       + I+S SK S   G+R G+      +L   
Sbjct: 195 ECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASIL--- 251

Query: 140 GFPVINDFNR----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT 195
                  +      + C        + +A  +A L  E  E   ++   Y +N K+  + 
Sbjct: 252 -----KKYKAYRTYLGCASPLP---LQKAAAVAWLDDEHAEFFRNI---YAKNLKLAREI 300

Query: 196 LASLGIKVYGGINAP----YVWAHFPGRKSWDVFAEIL-EKTHITTVPGSGFGPG--GEE 248
           L         GI  P    YVW      +    F + L +   I  +PGS  G    G+ 
Sbjct: 301 L---------GITIPPATFYVWLPVDNDEE---FTKKLYQNEGIKVLPGSFLGRNGIGKG 348

Query: 249 YIRISGFGHRESILEASRRLEAL 271
           Y+RI+       + +A   ++  
Sbjct: 349 YVRIALVYDTPKLEKALEIIKTY 371

Length = 374

>gnl|CDD|236517 PRK09440, avtA, valine--pyruvate transaminase; Provisional

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 62/263 (23%), Positives = 95/263 (36%), Gaps = 61/263 (23%)

Query: 24  NIEYLECGPGNNFF---PD---LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77
           NIE L        F    D   L     T  I    P NPTG+  T  +LE+L   AR +
Sbjct: 156 NIELLP----EGQFKYHVDFEHLHIDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQH 211

Query: 78  GSIIIFDSAYAAYVTDGCPRSIYE--IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL 135
              ++ D+AY        P  I+    P      I   S SK  G  GVR G  +  EE+
Sbjct: 212 NIPLLIDNAYGPPF----PGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEEI 266

Query: 136 LFSSGFPVINDFNRIICTCFNGASNIAQA--------GGLACLSSEGLEAVHSVV-DYYK 186
           +       +++ N II         +  A        G L  LS         V+  +Y+
Sbjct: 267 I-----EALSNMNGIISLA---PGRLGPAIAAEMIESGDLLRLSET-------VIRPFYR 311

Query: 187 ENTKILIDTL--ASLGIKVY-----GGINAPYVWAHFPGRK--SWDVFAEILEKTHITTV 237
           +  ++ I  L               G I   ++W  F      + +++ + L+   +  V
Sbjct: 312 QKVQLAIALLRRYLPDEPCLIHKPEGAI---FLWLWFKDLPITTEELY-QRLKARGVLVV 367

Query: 238 PGSGFGPG-------GEEYIRIS 253
           PG  F PG         + IR++
Sbjct: 368 PGHYFFPGLDEDWPHAHQCIRMN 390

Length = 416

>gnl|CDD|226485 COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 58/245 (23%), Positives = 94/245 (38%), Gaps = 37/245 (15%)

Query: 37  FPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP 96
           F  L     T  I    P NPTG+  T  +L +L   AR +G  +I D+AY        P
Sbjct: 171 FEHLHIGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPF----P 226

Query: 97  RSIYE--IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154
             I+    P   E  I   S SK  G  G R G  +  E+++       I + N II   
Sbjct: 227 GIIFSDATPLWNENIILCMSLSKL-GLPGSRCGIIIANEKVI-----QAITNMNGIISLA 280

Query: 155 FNG-----ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS----LGIKVYG 205
                   A+ + ++G L  LS + +        +Y+   +  I  L          ++ 
Sbjct: 281 PGRMGPAIAAEMIESGDLLRLSEQVIRP------FYRNRVQTTIAILRRYLPEYRCLIHK 334

Query: 206 GINAPYVWAHFPGR--KSWDVFAEILEKTHITTVPGSGFGPG-GEEY------IRISGFG 256
              A ++W  F      + +++   L+   +  VPG  F PG  +E+      +R++   
Sbjct: 335 PEGAIFLWLWFKDLPITTEELYQR-LKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVP 393

Query: 257 HRESI 261
             E I
Sbjct: 394 EPEKI 398

Length = 417

>gnl|CDD|181212 PRK08056, PRK08056, threonine-phosphate decarboxylase; Provisional

 Score = 46.6 bits (111), Expect = 6e-06
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 2/88 (2%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
           T   D +F C+PNNPTG    +  L+ + E  ++    +I D A+  ++ D     I ++
Sbjct: 140 TPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE-TGFIPQL 198

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTV 130
                + + + S +KF    G+RLG+ V
Sbjct: 199 ADNPHLWV-LRSLTKFYAIPGLRLGYLV 225

Length = 356

>gnl|CDD|179869 PRK04635, PRK04635, histidinol-phosphate aminotransferase; Provisional

 Score = 46.2 bits (110), Expect = 7e-06
 Identities = 62/223 (27%), Positives = 89/223 (39%), Gaps = 43/223 (19%)

Query: 48  IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SIYEIPGAR 106
           ++F C+PNNPTG    +  +EQL+E   +  +I++ D AY     + CP  S+ ++  + 
Sbjct: 150 LVFICNPNNPTGTVIDRADIEQLIEMTPD--AIVVVDEAY----IEFCPEYSVADLLASY 203

Query: 107 EVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA-------- 158
              + + + SK     G R G+T+  EE        +I    R+I      A        
Sbjct: 204 PNLVVLRTLSKAFALAGARCGFTLANEE--------LIEILMRVI------APYPVPLPV 249

Query: 159 SNIA-QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGINAPYVWAHF 216
           S IA QA     LS  GL  +   V         L   L+  G  KV  G N  YV A F
Sbjct: 250 SEIATQA-----LSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG-NGNYVLAKF 303

Query: 217 PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRE 259
                 D   + L    I  V  +   P     IR S F +R 
Sbjct: 304 DDV---DAVFKALWDAGI--VARAYKDPRLANCIRFS-FSNRA 340

Length = 354

>gnl|CDD|188122 TIGR01264, tyr_amTase_E, tyrosine aminotransferase, eukaryotic

 Score = 46.3 bits (110), Expect = 8e-06
 Identities = 53/265 (20%), Positives = 97/265 (36%), Gaps = 31/265 (11%)

Query: 25  IEYLECGPGNNFFPDLKGTS-----RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79
           ++     P  ++  DLK        +T  +   +P+NP G   ++  LE+++  A     
Sbjct: 143 VKLYNLLPDKSWEIDLKQLESLIDEKTAALVVNNPSNPCGSVFSRQHLEEILAVAERQCL 202

Query: 80  IIIFDSAYAAYVTDGC---PRSIY--EIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE 134
            II D  Y   V  G    P +     +P      +     +K     G RLGW ++ + 
Sbjct: 203 PIIADEIYGDMVFSGATFEPVASLSSNVP-----ILSCGGLAKRWLVPGWRLGWIIIHDR 257

Query: 135 LLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194
                   + +   + +     G   I Q    + L     E     +   + N  +   
Sbjct: 258 --RGILRDIRDGLVK-LSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYG 314

Query: 195 TLASL-GIKVYGGINAPYVWA-----HFPGRKSWDV--FAEILEKTHITTVPGSGFG-PG 245
            LA++ G++      A Y+       HFP  K+ DV     ++ +  +  +PGS F  PG
Sbjct: 315 ALAAVPGLQPVMPSGAMYMMVGIEMEHFPEFKN-DVEFTERLIAEQSVFCLPGSCFEYPG 373

Query: 246 GEEYIRISGFGHRESILEASRRLEA 270
              + R+        + EA  R++ 
Sbjct: 374 ---FFRVVLTVPVVMMEEACSRIQE 395

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs [Energy metabolism, Amino acids and amines]. Length = 401

>gnl|CDD|180734 PRK06855, PRK06855, aminotransferase; Validated

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 11/109 (10%)

Query: 32  PGNNFFPDL-----KGTSRTDI--IFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD 84
           P NN++PDL     K      I  I   +P+NPTG    +  L ++V+ AR     II D
Sbjct: 151 PENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICD 210

Query: 85  SAYAAYVTDGC-PRSIYEIPGAREV-AIEISSFSKFSGFTGVRLGWTVV 131
             Y   V +G     + E+ G  +V  I +   SK   + G R GW  V
Sbjct: 211 EIYNNIVYNGKKTVPLSEVIG--DVPGIALKGISKELPWPGSRCGWIEV 257

Length = 433

>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 24/251 (9%)

Query: 28  LECGPGNNFFP----DLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83
           L+  PG   F     +   T +  ++  CSP+NP G   T+ +L +L E    +  +++ 
Sbjct: 136 LKLDPGRYRFDLEDLEDAITEKARLLLLCSPHNPVGRVWTREELTRLAELCLRHNVVVVS 195

Query: 84  DSAYAAYVTDG---CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG 140
           D  +A  V       P +    P   E  + + S  K     G+ + + ++P   L  + 
Sbjct: 196 DEIHADLVYPPNKHIPLASLS-PEIAERTVTLLSPGKTFNIAGLNISFAIIPNPELRRA- 253

Query: 141 FPVIND-FNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS- 198
                +   R+     N    +A          EG   + +++ Y + N  ++ + +A  
Sbjct: 254 ---FQEAAQRVHIQHGNLFGYVA----FEAAYREGEPWLDALLAYLRGNRDLVEEFIAKR 306

Query: 199 -LGIKVYGGINAPY-VW--AHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG 254
              I+V     A Y  W      G    D+ A  +E+  +   PG  FG GG  ++R++ 
Sbjct: 307 LPQIRVR-PPEATYLAWLDCRALGLDDADLRAFFIEQAGLGLNPGISFGDGGSGFMRLN- 364

Query: 255 FGHRESILEAS 265
           FG   S LE +
Sbjct: 365 FGCPRSTLEQA 375

Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A). Length = 384

>gnl|CDD|180403 PRK06107, PRK06107, aspartate aminotransferase; Provisional

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 27/244 (11%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVE-FARNNGSIIIFDSAYAAYVTDGCPRS--I 99
           T RT  +   +P+NPTG   ++ +L  L +   R+   +++ D  Y     D  P    +
Sbjct: 164 TPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLL 223

Query: 100 YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS 159
              P  R+  +  +  SK    TG R+G+   P +L+       IN       +C    S
Sbjct: 224 AAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLI-----AAINKLQSQSSSC---PS 275

Query: 160 NIAQAGGLACLSSEGLEAVHSVVDYYKEN---TKILIDTLASLGIKVYGGINAPYV-WAH 215
           +I+QA   A L+ +    V   V  YK+       L++ +  L   V  G    YV  A 
Sbjct: 276 SISQAAAAAALNGDQ-SFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAG 334

Query: 216 FPGRKS---------WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASR 266
             G+ +          DV   +L+   +  V G+ +G     Y R+S     E++ EA  
Sbjct: 335 LIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLS--PYFRLSIATSLETLEEACA 392

Query: 267 RLEA 270
           R+E 
Sbjct: 393 RIER 396

Length = 402

>gnl|CDD|236444 PRK09275, PRK09275, aspartate aminotransferase; Provisional

 Score = 44.5 bits (106), Expect = 4e-05
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 9/83 (10%)

Query: 49  IFFC-SPNNPTGHAATQNQLEQLVEFARNNGS--IIIFDSAYAAYVTDGCPRSIY-EIPG 104
             F  +P+NP   A +   LE++ +         +II D  Y  +V D   RS++  +P 
Sbjct: 244 ALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDF--RSLFAVLP- 300

Query: 105 AREVAIEISSFSKFSGFTGVRLG 127
                I + SFSK+ G TG RLG
Sbjct: 301 --YNTILVYSFSKYFGATGWRLG 321

Length = 527

>gnl|CDD|179888 PRK04870, PRK04870, histidinol-phosphate aminotransferase; Provisional

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 10/90 (11%)

Query: 48  IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG-CPRSIYEIPGAR 106
           ++F   PNNPTG+      +E+++E A     +++ D AY  +  D   PR +   P   
Sbjct: 156 LVFLAYPNNPTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDSWLPR-LARFPN-- 209

Query: 107 EVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
              + + + SK  G  G+RLG+       +
Sbjct: 210 --LLVMRTVSKL-GLAGLRLGYLAGHPAWI 236

Length = 356

>gnl|CDD|173269 PRK14808, PRK14808, histidinol-phosphate aminotransferase; Provisional

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 29/136 (21%)

Query: 15  LEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA 74
           LE  + K   I  +  G G             D++F  +PNNPTGH   + ++E++++  
Sbjct: 121 LEVPLTKDLRIPEVNVGEG-------------DVVFIPNPNNPTGHVFEREEIERILK-- 165

Query: 75  RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE 134
              G+ +  D AY  +  +    S  ++    E    I +FSK       R+G+ V  E+
Sbjct: 166 --TGAFVALDEAYYEFHGE----SYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEK 219

Query: 135 LLFSSGFPVINDFNRI 150
                    I+ +NR+
Sbjct: 220 F--------IDAYNRV 227

Length = 335

>gnl|CDD|181255 PRK08153, PRK08153, histidinol-phosphate aminotransferase; Provisional

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 26/130 (20%)

Query: 48  IIFFCSPNNPTG--HAATQNQLEQLVEFARN--NGSIIIFDSAYAAYVTDGCPRSIYEIP 103
           +++  +P+NP G  H A       +V F       ++++ D AY      G   +   I 
Sbjct: 158 LVYLANPDNPMGSWHPA-----ADIVAFIEALPETTLLVLDEAYCETAPAG---AAPPID 209

Query: 104 GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN--GASNI 161
                 I + +FSK  G  G R+G+ +             I  F+++     N  G + I
Sbjct: 210 TDDPNVIRMRTFSKAYGLAGARVGYAIGAPG--------TIKAFDKV----RNHFGMNRI 257

Query: 162 AQAGGLACLS 171
           AQA  LA L 
Sbjct: 258 AQAAALAALK 267

Length = 369

>gnl|CDD|178597 PLN03026, PLN03026, histidinol-phosphate aminotransferase; Provisional

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 7/94 (7%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
           T +  ++F  SPNNP G   + + L +++E       +++ D AY  + T      +  +
Sbjct: 173 THKPKLLFLTSPNNPDGSIISDDDLLKILELP----ILVVLDEAYIEFST--QESRMKWV 226

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
               +  I + +FSK +G  G+R+G+   P  ++
Sbjct: 227 K-KYDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 259

Length = 380

>gnl|CDD|165711 PLN00143, PLN00143, tyrosine/nicotianamine aminotransferase; Provisional

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)

Query: 53  SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEI 112
           +P NP G   +   L ++ E AR  G ++I D  Y   V    P     +  +    I +
Sbjct: 178 NPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITL 237

Query: 113 SSFSKFSGFTGVRLGWTVV--PEELL 136
            S SK     G  LGW V   P  LL
Sbjct: 238 GSISKRWMIPGWGLGWLVTCDPSGLL 263

Length = 409

>gnl|CDD|223153 COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 11/104 (10%)

Query: 173 EGLEAVHSVVDYYKENTKILIDTLASLGIKVYG--GINAPYVWAHFP--GRKSWDVFAEI 228
           EGLEA       ++   + L   L +LG++++      +P V A     G     V   +
Sbjct: 261 EGLEARI---ARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVDDKKVRRAL 317

Query: 229 LEKTHITTVPGSGFGPGGEEYIRISGFG--HRESILEASRRLEA 270
           L++  +      G GP   +  RI   G    E +L A   LEA
Sbjct: 318 LKEYGV--EIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEA 359

Length = 383

>gnl|CDD|180188 PRK05664, PRK05664, threonine-phosphate decarboxylase; Reviewed

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 4/90 (4%)

Query: 47  DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAR 106
           D++   +PNNPTG      +L          G  ++ D A+     D  P+        R
Sbjct: 126 DVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAF----MDNTPQHSLAACAHR 181

Query: 107 EVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
              I + SF KF G  G RLG+ +    LL
Sbjct: 182 PGLIVLRSFGKFFGLAGARLGFVLAEPALL 211

Length = 330

>gnl|CDD|240391 PTZ00377, PTZ00377, alanine aminotransferase; Provisional

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 59/231 (25%), Positives = 88/231 (38%), Gaps = 55/231 (23%)

Query: 54  PNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSI------YEIPGARE 107
           P NPTG   T++ +E++++F    G +++ D  Y   + DG    I       E+P    
Sbjct: 227 PGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYN 286

Query: 108 VAIEISSF---SK-FSGFTGVRLGW---TVVPEELLFSSGFPVINDFNRI--ICTCFNGA 158
             +E+ SF   SK   G  G R G+   T +P E        V     ++  I  C N  
Sbjct: 287 TDVELVSFHSTSKGIIGECGRRGGYFELTNIPPE--------VREQIYKLASINLCSNVV 338

Query: 159 SNIAQAGGLAC-LSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN--------- 208
             +    GL C    EG +A +     YK     +  +L      +   +N         
Sbjct: 339 GQLMT--GLMCNPPREG-DASY---PLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQP 392

Query: 209 ---APYVWA--HFPGR---------KSWDVF--AEILEKTHITTVPGSGFG 243
              A Y +     P +          + DV    E+LE T I  VPGSGFG
Sbjct: 393 VEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFG 443

Length = 481

>gnl|CDD|163513 TIGR03801, asp_4_decarbox, aspartate 4-decarboxylase

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 9/83 (10%)

Query: 49  IFFC-SPNNPTGHAATQNQLEQLVEFARNNGS--IIIFDSAYAAYVTDGCPRSIY-EIPG 104
             F  +P+NP   A +   +E++V+   N+    +I+ D  Y  +V D   RS++ E+P 
Sbjct: 243 ALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDF--RSLFAELP- 299

Query: 105 AREVAIEISSFSKFSGFTGVRLG 127
                I + SFSK+ G TG RLG
Sbjct: 300 --YNTIGVYSFSKYFGATGWRLG 320

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1) [Energy metabolism, Amino acids and amines]. Length = 521

>gnl|CDD|240390 PTZ00376, PTZ00376, aspartate aminotransferase; Provisional

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 6/99 (6%)

Query: 34  NNFFPDLKGTSRTDIIFF--CSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91
           +    DL+      ++    C+ +NPTG   T+ Q +++ +  +    I  FD AY  + 
Sbjct: 164 DGMLEDLRTAPNGSVVLLHACA-HNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFA 222

Query: 92  TDGCPRSIYEIP--GAREVAIEIS-SFSKFSGFTGVRLG 127
           +    +  Y I     R V   ++ SFSK  G  G R+G
Sbjct: 223 SGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIG 261

Length = 404

>gnl|CDD|236128 PRK07908, PRK07908, hypothetical protein; Provisional

 Score = 40.4 bits (95), Expect = 7e-04
 Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 37/175 (21%)

Query: 54  PNNPTG--HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSI--YEIPGAREVA 109
           P NPT   H A     EQL+   R  G I++ D A+A  V  G P S+   ++PG     
Sbjct: 148 PTNPTSVLHPA-----EQLLALRRP-GRILVVDEAFADAV-PGEPESLAGDDLPGV---- 196

Query: 110 IEISSFSKFSGFTGVRLGWTVVPEELL--FSSG---FPVINDFNRIICTCFNGASNIAQA 164
           + + S +K     G+R+G+ +   ++L   + G   +PV                 +   
Sbjct: 197 LVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHWPV---------------GTLQLE 241

Query: 165 GGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG 218
              AC +   + EA         +  + ++  L ++G +V     AP+V    P 
Sbjct: 242 AIAACCAPRAVAEAAADAARLAADRAE-MVAGLRAVGARVVDPAAAPFVLVRVPD 295

Length = 349

>gnl|CDD|102370 PRK06425, PRK06425, histidinol-phosphate aminotransferase; Validated

 Score = 39.5 bits (92), Expect = 0.001
 Identities = 47/226 (20%), Positives = 88/226 (38%), Gaps = 19/226 (8%)

Query: 38  PDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR 97
           P++      D+IF  SP+NP G+  +++ L  + E  R  G+++  D A+  +V +    
Sbjct: 115 PEILNNYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA-E 173

Query: 98  SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG 157
               +  +    I   S +K  G   +R+G+                +D+N  I      
Sbjct: 174 EDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIAT-------------DDYNMKISRKITE 220

Query: 158 ASNIAQAGGLACLSSEGLEAVH-SVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHF 216
             ++     +  + S  L+ V    +D  +     LI+ L ++G +  G  +A ++    
Sbjct: 221 PWSVCDP-AIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAMGFRAAGDPSANFITFMI 279

Query: 217 PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESIL 262
           P       F   L K  I       +   GE+YIRI+      +I 
Sbjct: 280 PDA---HDFYSYLLKNGILVRLLDDYECLGEQYIRIAIRRRSFNIK 322

Length = 332

>gnl|CDD|235742 PRK06207, PRK06207, aspartate aminotransferase; Provisional

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 51  FCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRS-IYEIPGAREVA 109
           F +PNNP G   +  ++ Q+   AR  G+ +I D  Y+  + DG   + +  +P   E  
Sbjct: 184 FSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENV 243

Query: 110 IEISSFSKFSGFTGVRLG 127
           I I   SK    +G RLG
Sbjct: 244 ITIMGPSKTESLSGYRLG 261

Length = 405

>gnl|CDD|235440 PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional

 Score = 38.2 bits (90), Expect = 0.003
 Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 54/202 (26%)

Query: 49  IFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREV 108
           I F +PN PTG A    ++E+++  A N  S+++ D AY  +             G  E 
Sbjct: 148 IIFPNPNAPTGIALPLAEIERIL--AANPDSVVVIDEAYVDF-------------GG-ES 191

Query: 109 AIE----------ISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA 158
           AI           + +FSK     G+R+G+ +   EL        I   NR+    FN  
Sbjct: 192 AIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPEL--------IEALNRVK-NSFNSY 242

Query: 159 S--NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT-------LASLGIKVYGGINA 209
               +AQAG +A +  E          Y++E    +I T       L +LG +V     A
Sbjct: 243 PLDRLAQAGAIAAIEDE---------AYFEETRAKVIATRERLVEELEALGFEVLPS-KA 292

Query: 210 PYVWAHFPGRKSWDVFAEILEK 231
            +V+A  P   + ++ A++ E+
Sbjct: 293 NFVFARHPSHDAAELAAKLRER 314

Length = 353

>gnl|CDD|236009 PRK07392, PRK07392, threonine-phosphate decarboxylase; Validated

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 6/107 (5%)

Query: 31  GPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVE-FARNNGSIIIFDSAYAA 89
           G            +  D +   +P+NPTG   ++  +  L+E FA      ++ D A+  
Sbjct: 134 GLTLRLQTLPPQLTPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-----VVVDEAFMD 188

Query: 90  YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
           ++     +S+          I + S +KF    G+RLG+ +   + L
Sbjct: 189 FLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRL 235

Length = 360

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	272
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	100.0
PRK07681	399	aspartate aminotransferase; Provisional	100.0
PRK07366	388	succinyldiaminopimelate transaminase; Validated	100.0
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	100.0
PLN00175	413	aminotransferase family protein; Provisional	100.0
PRK08636	403	aspartate aminotransferase; Provisional	100.0
PRK06348	384	aspartate aminotransferase; Provisional	100.0
PRK08068	389	transaminase; Reviewed	100.0
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	100.0
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	100.0
PRK07682	378	hypothetical protein; Validated	100.0
PRK06207	405	aspartate aminotransferase; Provisional	100.0
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	100.0
PRK09148	405	aminotransferase; Validated	100.0
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	100.0
PRK05942	394	aspartate aminotransferase; Provisional	100.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK05839	374	hypothetical protein; Provisional	100.0
PRK07683	387	aminotransferase A; Validated	100.0
PRK06290	410	aspartate aminotransferase; Provisional	100.0
PRK12414	384	putative aminotransferase; Provisional	100.0
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	100.0
PRK08960	387	hypothetical protein; Provisional	100.0
PRK09082	386	methionine aminotransferase; Validated	100.0
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	100.0
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	100.0
PRK07324	373	transaminase; Validated	100.0
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK07337	388	aminotransferase; Validated	100.0
PRK07309	391	aromatic amino acid aminotransferase; Validated	100.0
PRK08912	387	hypothetical protein; Provisional	100.0
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	100.0
PRK06855	433	aminotransferase; Validated	100.0
PRK06108	382	aspartate aminotransferase; Provisional	100.0
PRK08175	395	aminotransferase; Validated	100.0
PLN02187	462	rooty/superroot1	100.0
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	100.0
PRK05957	389	aspartate aminotransferase; Provisional	100.0
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	100.0
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	100.0
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	100.0
PTZ00377	481	alanine aminotransferase; Provisional	100.0
PRK06107	402	aspartate aminotransferase; Provisional	100.0
PRK08361	391	aspartate aminotransferase; Provisional	100.0
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	100.0
PRK07777	387	aminotransferase; Validated	100.0
PTZ00433	412	tyrosine aminotransferase; Provisional	100.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	100.0
PRK06425	332	histidinol-phosphate aminotransferase; Validated	100.0
PLN02656	409	tyrosine transaminase	100.0
PLN02231	534	alanine transaminase	100.0
PRK05764	393	aspartate aminotransferase; Provisional	100.0
PRK08363	398	alanine aminotransferase; Validated	100.0
PRK07550	386	hypothetical protein; Provisional	100.0
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	100.0
PRK06358	354	threonine-phosphate decarboxylase; Provisional	100.0
PRK07568	397	aspartate aminotransferase; Provisional	100.0
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	100.0
PRK09275	527	aspartate aminotransferase; Provisional	100.0
PRK09265	404	aminotransferase AlaT; Validated	100.0
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	100.0
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	100.0
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	100.0
PLN02397	423	aspartate transaminase	100.0
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
PRK07392	360	threonine-phosphate decarboxylase; Validated	100.0
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	100.0
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	100.0
PLN02672	1082	methionine S-methyltransferase	100.0
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
PRK07908	349	hypothetical protein; Provisional	100.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08056	356	threonine-phosphate decarboxylase; Provisional	100.0
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06836	394	aspartate aminotransferase; Provisional	100.0
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	100.0
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	100.0
PRK08637	388	hypothetical protein; Provisional	100.0
PRK01533	366	histidinol-phosphate aminotransferase; Validated	100.0
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	100.0
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	100.0
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	100.0
PRK09105	370	putative aminotransferase; Provisional	100.0
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06225	380	aspartate aminotransferase; Provisional	100.0
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	100.0
PRK02731	367	histidinol-phosphate aminotransferase; Validated	100.0
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	100.0
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	100.0
KOG0634	472	consensus Aromatic amino acid aminotransferase and	100.0
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	100.0
PRK00950	361	histidinol-phosphate aminotransferase; Validated	100.0
PLN02368	407	alanine transaminase	100.0
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	100.0
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	100.0
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08354	311	putative aminotransferase; Provisional	100.0
PRK03321	352	putative aminotransferase; Provisional	100.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	99.97
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.97
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	99.96
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.95
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.94
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.94
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.93
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.93
PRK13392	410	5-aminolevulinate synthase; Provisional	99.93
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	99.93
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.93
PLN02822	481	serine palmitoyltransferase	99.93
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.93
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	99.92
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.92
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.92
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.92
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.92
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.91
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.91
PLN02483	489	serine palmitoyltransferase	99.91
PRK02627	396	acetylornithine aminotransferase; Provisional	99.91
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.91
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.91
PRK02948	381	cysteine desulfurase; Provisional	99.91
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.91
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.91
PRK10534	333	L-threonine aldolase; Provisional	99.91
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.91
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.91
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.9
PRK09064	407	5-aminolevulinate synthase; Validated	99.9
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.9
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.9
PLN02721	353	threonine aldolase	99.9
PLN02409	401	serine--glyoxylate aminotransaminase	99.9
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.9
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.9
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.9
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.89
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.89
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.89
PRK13393	406	5-aminolevulinate synthase; Provisional	99.89
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.89
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.89
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.89
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.89
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.88
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.88
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.88
PRK07179	407	hypothetical protein; Provisional	99.88
PRK04260	375	acetylornithine aminotransferase; Provisional	99.87
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.87
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.86
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.86
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.86
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.85
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.85
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.85
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.85
PRK07505	402	hypothetical protein; Provisional	99.84
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.84
PLN02242	418	methionine gamma-lyase	99.84
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.84
PLN00144	382	acetylornithine transaminase	99.84
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.84
PRK07049	427	methionine gamma-lyase; Validated	99.83
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.83
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.83
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.83
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.83
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.83
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.83
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.83
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.83
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.83
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.83
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.82
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.81
PLN02955	476	8-amino-7-oxononanoate synthase	99.81
PLN02651	364	cysteine desulfurase	99.81
PRK06460	376	hypothetical protein; Provisional	99.81
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.81
PLN02624	474	ornithine-delta-aminotransferase	99.81
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.81
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.81
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.8
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.8
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.79
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.79
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.79
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	99.79
PRK14012	404	cysteine desulfurase; Provisional	99.78
PRK07582	366	cystathionine gamma-lyase; Validated	99.78
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.77
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.77
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.76
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.76
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.75
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.75
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.75
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.75
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.75
PRK06234	400	methionine gamma-lyase; Provisional	99.74
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.74
PRK06767	386	methionine gamma-lyase; Provisional	99.74
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.74
PRK08776	405	cystathionine gamma-synthase; Provisional	99.74
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	99.73
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.73
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.73
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.72
PRK08249	398	cystathionine gamma-synthase; Provisional	99.72
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.71
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.71
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.71
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.71
PRK03080	378	phosphoserine aminotransferase; Provisional	99.7
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.7
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.69
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.69
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.69
PRK08064	390	cystathionine beta-lyase; Provisional	99.69
PRK08045	386	cystathionine gamma-synthase; Provisional	99.69
PRK07811	388	cystathionine gamma-synthase; Provisional	99.68
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.68
PRK07503	403	methionine gamma-lyase; Provisional	99.68
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.68
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.68
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.68
PRK05968	389	hypothetical protein; Provisional	99.67
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.67
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.67
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	99.67
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.66
PRK06541	460	hypothetical protein; Provisional	99.66
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.65
PLN02724	805	Molybdenum cofactor sulfurase	99.65
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.65
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.64
PRK09028	394	cystathionine beta-lyase; Provisional	99.64
PRK07671	377	cystathionine beta-lyase; Provisional	99.64
PRK08861	388	cystathionine gamma-synthase; Provisional	99.63
PRK07050	394	cystathionine beta-lyase; Provisional	99.63
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.63
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.63
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.63
PRK08574	385	cystathionine gamma-synthase; Provisional	99.63
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.63
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.62
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.61
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.6
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.6
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.6
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.6
PRK05939	397	hypothetical protein; Provisional	99.59
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.59
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.59
PRK07678	451	aminotransferase; Validated	99.58
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.58
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.58
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.58
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.58
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.58
PLN02509	464	cystathionine beta-lyase	99.57
PRK05967	395	cystathionine beta-lyase; Provisional	99.56
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.55
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.54
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.54
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.54
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.53
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.53
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.53
PRK05965	459	hypothetical protein; Provisional	99.53
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.52
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.52
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.52
PLN02271	586	serine hydroxymethyltransferase	99.52
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.52
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.52
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.52
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.51
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.51
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.5
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.5
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.5
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.5
PRK06105	460	aminotransferase; Provisional	99.5
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.5
PRK07482	461	hypothetical protein; Provisional	99.5
PRK07480	456	putative aminotransferase; Validated	99.49
PRK07481	449	hypothetical protein; Provisional	99.49
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.49
PLN02452	365	phosphoserine transaminase	99.49
PRK07036	466	hypothetical protein; Provisional	99.49
PRK06917	447	hypothetical protein; Provisional	99.48
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.48
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.47
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.47
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.47
PRK06062	451	hypothetical protein; Provisional	99.47
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.46
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.46
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.46
PRK02769	380	histidine decarboxylase; Provisional	99.45
PRK07483	443	hypothetical protein; Provisional	99.45
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.45
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.44
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.44
PRK12403	460	putative aminotransferase; Provisional	99.43
PRK08297	443	L-lysine aminotransferase; Provisional	99.43
PRK06148	1013	hypothetical protein; Provisional	99.42
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.41
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	99.41
PRK06149	972	hypothetical protein; Provisional	99.41
PRK08114	395	cystathionine beta-lyase; Provisional	99.4
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.4
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.39
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.39
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.38
PRK12462	364	phosphoserine aminotransferase; Provisional	99.38
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.37
PRK07046	453	aminotransferase; Validated	99.37
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.37
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.36
PRK06434	384	cystathionine gamma-lyase; Validated	99.35
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.33
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.32
PRK12566	954	glycine dehydrogenase; Provisional	99.31
PLN02880	490	tyrosine decarboxylase	99.3
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	99.3
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.29
PRK05367	954	glycine dehydrogenase; Provisional	99.28
PLN03032	374	serine decarboxylase; Provisional	99.27
PLN02590	539	probable tyrosine decarboxylase	99.25
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	99.24
PRK13237	460	tyrosine phenol-lyase; Provisional	99.24
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.23
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.23
PRK05367	954	glycine dehydrogenase; Provisional	99.21
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.21
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.2
PRK15029	755	arginine decarboxylase; Provisional	99.19
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.18
PRK04311	464	selenocysteine synthase; Provisional	99.17
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.17
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.15
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.14
PLN02263	470	serine decarboxylase	99.13
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.12
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.11
PRK15400	714	lysine decarboxylase CadA; Provisional	99.05
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.02
PRK13578	720	ornithine decarboxylase; Provisional	99.01
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.01
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.0
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	98.96
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	98.93
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	98.9
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	98.89
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	98.88
PRK15399	713	lysine decarboxylase LdcC; Provisional	98.88
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	98.88
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	98.87
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	98.86
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	98.81
COG3844	407	Kynureninase [Amino acid transport and metabolism]	98.78
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	98.67
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	98.65
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	98.6
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	98.47
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	98.3
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	98.28
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	98.24
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	98.1
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	98.03
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	98.0
PRK12566	954	glycine dehydrogenase; Provisional	97.96
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	97.86
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	97.81
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	97.7
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	97.66
KOG0629	510	consensus Glutamate decarboxylase and related prot	97.59
COG4100	416	Cystathionine beta-lyase family protein involved i	97.57
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	97.3
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	97.16
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	96.14
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	95.4
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	92.49
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	90.13
cd06568	329	GH20_SpHex_like A subgroup of the Glycosyl hydrola	88.85
cd02742	303	GH20_hexosaminidase Beta-N-acetylhexosaminidases o	88.03
cd06563	357	GH20_chitobiase-like The chitobiase of Serratia ma	87.11
cd06562	348	GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c	85.85
cd06570	311	GH20_chitobiase-like_1 A functionally uncharacteri	85.4
PF00728	351	Glyco_hydro_20: Glycosyl hydrolase family 20, cata	83.01
cd06569	445	GH20_Sm-chitobiase-like The chitobiase of Serratia	82.24

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.1e-47  Score=326.96  Aligned_cols=261  Identities=36%  Similarity=0.532  Sum_probs=233.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCC-CCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPG-NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~-~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..|++. |.......| ++++++++.+ .+|.+|++.     .+++|+|++++||||||.+++++++++|+++|+
T Consensus       114 DeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~  193 (393)
T COG0436         114 DEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAR  193 (393)
T ss_pred             CEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHH
Confidence            56889999888 999999999 9999998765 499999654     368999999999999999999999999999999


Q ss_pred             HcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhhhh
Q 036024           76 NNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +|++++|.||+|.++.+++. +.++.+.....+++|.++||||.++++|||+||++++ +++        ++.+.+....
T Consensus       194 ~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l--------~~~~~~~~~~  265 (393)
T COG0436         194 EHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEEL--------IAALRKLKSY  265 (393)
T ss_pred             HcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHH--------HHHHHHHHHh
Confidence            99999999999999999984 7777777655688999999999999999999999999 445        6677777888


Q ss_pred             ccCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec-CCCceEEEeecCC-CChHHHHHHHH
Q 036024          154 CFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASL-GIKVYG-GINAPYVWAHFPG-RKSWDVFAEIL  229 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~i~l~~-~~~~~~~~~ll  229 (272)
                      ...+++.+.|.|+.++|.... ....+++++.+++|++.+.+.|.++ |+.+.. |++++|+|++++. .++.+++.+|+
T Consensus       266 ~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll  345 (393)
T COG0436         266 LTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPELLDSEEFAKKLL  345 (393)
T ss_pred             cccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCCCCHHHHHHHHH
Confidence            888899999999999999553 3677888899999999999999988 699988 7899999999986 68899999999


Q ss_pred             HhcCeEeeCCCCCCCC-CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          230 EKTHITTVPGSGFGPG-GEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~~-~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +++||.+.||+.|+.. +.+++|+|++.+.++++++++++++++
T Consensus       346 ~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~  389 (393)
T COG0436         346 EEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFL  389 (393)
T ss_pred             HhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHH
Confidence            9999999999999985 899999999888899999999998753

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=100.00  E-value=1.6e-43  Score=308.51  Aligned_cols=268  Identities=46%  Similarity=0.810  Sum_probs=219.8

Q ss_pred             cccccccCccc-chHHhcccc-e-----------eEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-N-----------IEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~-----------~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      |.|++..|.+. |...++..| +           ++++|++.+++|.+|++. +++|+++++|||||||.+++.+++++|
T Consensus       123 d~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~-~~~k~i~l~nP~NPTG~~~s~~~~~~l  201 (409)
T PRK07590        123 NTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE-EKVDIIYLCFPNNPTGTVLTKEQLKAW  201 (409)
T ss_pred             CEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc-cCceEEEEeCCCCCcCCcCCHHHHHHH
Confidence            67888888777 888888888 6           899999877789888765 789999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccC----CcchHH
Q 036024           71 VEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS----GFPVIN  145 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~----~~~~~~  145 (272)
                      +++|++++++||+||+|.++.+++. +.++..+++..+++|+++||||++|+||+|+||++++++++...    ......
T Consensus       202 ~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~  281 (409)
T PRK07590        202 VDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNS  281 (409)
T ss_pred             HHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHH
Confidence            9999999999999999999887653 34555555445679999999999999999999999998874210    000001


Q ss_pred             HHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHH
Q 036024          146 DFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDV  224 (272)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~  224 (272)
                      .+.........+.+.+.|.++..++......+++++++.++++++.+.+.|+++|+.+..+++|+|+|++++. .+..++
T Consensus       282 ~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~g~~f~wi~~~~~~~~~~~  361 (409)
T PRK07590        282 LWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAGFEVYGGVNAPYIWVKTPDGMSSWDF  361 (409)
T ss_pred             HHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCcceEEEEECCCCCCHHHH
Confidence            1222222233357889999998888755568889999999999999999999999888888899999999984 355677


Q ss_pred             HHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          225 FAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ...+++++||.+.||+.|+..+.+++|+++..+++++++++++|.++|
T Consensus       362 ~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~  409 (409)
T PRK07590        362 FDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAMERIKKAL  409 (409)
T ss_pred             HHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHHHHHHhhC
Confidence            888888889999999999876678999998778999999999999875

>PRK07681 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-43  Score=308.11  Aligned_cols=258  Identities=25%  Similarity=0.459  Sum_probs=221.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...++..| +++++|++++++|.+|++.+     +++|+++++|||||||.+++.+++++|+++|++
T Consensus       118 d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~  197 (399)
T PRK07681        118 DIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKK  197 (399)
T ss_pred             CEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHH
Confidence            67888777666 888889999 99999998877888875442     688999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      ++++||+||+|.++.+++. ..++..+.+..+++|+++||||.||+||+|+||+++++++        ++.+........
T Consensus       198 ~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l--------~~~~~~~~~~~~  269 (399)
T PRK07681        198 HNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEI--------VRALTQFKSNTD  269 (399)
T ss_pred             cCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHH--------HHHHHHHHhhcc
Confidence            9999999999999887653 3455555545578999999999999999999999998887        667776666556


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi  234 (272)
                      .+.+.+.|.++.+++.+. ..++++.++.++++++.+.+.|++.|+++..+++|+|+|+.++ +.+..++..++++++||
T Consensus       270 ~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~~gv  348 (399)
T PRK07681        270 YGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMFVWAEIPKGWTSLSFAYALMDRANV  348 (399)
T ss_pred             cCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeeEEEEECCCCCCHHHHHHHHHHhCCE
Confidence            668889999999999843 4688889999999999999999999998877889999999998 44667888888887899


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA  270 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~  270 (272)
                      .+.||..|+..+++++|++++.+++++++++++|++
T Consensus       349 ~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~  384 (399)
T PRK07681        349 VVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN  384 (399)
T ss_pred             EEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence            999999998666789999998888999999999987

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=100.00  E-value=2.4e-43  Score=305.64  Aligned_cols=260  Identities=23%  Similarity=0.399  Sum_probs=213.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...++..| +++++|++++++|.+|++.     .+++|++++++||||||.+++.+++++|+++|++
T Consensus       117 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~  196 (388)
T PRK07366        117 DFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQ  196 (388)
T ss_pred             CEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHH
Confidence            66788877776 888888899 9999999877788877543     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC--CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGC--PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ++++||+||+|.++.+++.  ..++..+....+++++++||||+||+||+|+||+++++++        ++.+.......
T Consensus       197 ~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~l--------i~~l~~~~~~~  268 (388)
T PRK07366        197 HDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQL--------IQALRQVKAVV  268 (388)
T ss_pred             cCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHH--------HHHHHHHHhhc
Confidence            9999999999999987653  2345555433457899999999999999999999998887        66776666544


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC---ChHHHHHHHHHh
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR---KSWDVFAEILEK  231 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~---~~~~~~~~ll~~  231 (272)
                      ..+.+...+.++.+.+.. ..+++++.++.++++++.+.+.|+++|+.+..|++|+|+|+.++..   +..+++..++++
T Consensus       269 ~~~~~~~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~  347 (388)
T PRK07366        269 DFNQYRGILNGAIAALTG-PQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQ  347 (388)
T ss_pred             ccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCcccCCCHHHHHHHHHHh
Confidence            443433334444555542 3578899999999999999999999898877788999999999842   356777788888


Q ss_pred             cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.||+.|+..+.+++|++++.+++++++++++|+++|
T Consensus       348 ~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l  388 (388)
T PRK07366        348 TGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL  388 (388)
T ss_pred             CCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence            89999999999766678999999888999999999999875

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=100.00  E-value=3.5e-42  Score=299.41  Aligned_cols=269  Identities=48%  Similarity=0.872  Sum_probs=217.6

Q ss_pred             cccccccCccc-chHHhcccc------------eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC------------NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g------------~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      |.|++..|.+. |...++..|            ++++++.+++++|.+|+...+++++++++|||||||.+++.+++++|
T Consensus       119 d~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l  198 (402)
T TIGR03542       119 NTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKEL  198 (402)
T ss_pred             CEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHH
Confidence            66777777666 777776665            56778887666888887655789999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024           71 VEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR  149 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~  149 (272)
                      +++|++++++||+||+|.++.+++. +.++..++...+++++++||||.||+||+|+||++++++++..........+..
T Consensus       199 ~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~  278 (402)
T TIGR03542       199 VDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWER  278 (402)
T ss_pred             HHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHH
Confidence            9999999999999999999887653 344555554456889999999999999999999999988732111111233333


Q ss_pred             hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHH
Q 036024          150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEI  228 (272)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~l  228 (272)
                      .......+++.+.|.++..++.+....+..+.++.++++++.+.+.|++.|+++.++.+++|+|+.++. .++.++...+
T Consensus       279 ~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~f~~v~l~~~~~~~~l~~~l  358 (402)
T TIGR03542       279 RQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAGFKVYGGEHAPYLWVKTPEGISSWDFFDFL  358 (402)
T ss_pred             HhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcCceecCCCceeEEEEECCCCCCHHHHHHHH
Confidence            333334457889999888888865666677788999999999999999989888887789999999984 4567888888


Q ss_pred             HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++++||.+.||+.|+..+.+++|++++.+++++.+++++|+++|
T Consensus       359 ~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~  402 (402)
T TIGR03542       359 LYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEAL  402 (402)
T ss_pred             HHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhhC
Confidence            98889999999999766678999998778999999999999875

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PLN00175 aminotransferase family protein; Provisional

Probab=100.00  E-value=1.4e-42  Score=302.11  Aligned_cols=259  Identities=22%  Similarity=0.346  Sum_probs=221.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...++..| ++++++++++ ++.+|++.     .+++|++++++||||||.+++.+++++|+++|++
T Consensus       140 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~  218 (413)
T PLN00175        140 DEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKE  218 (413)
T ss_pred             CEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHH
Confidence            67888888777 778888889 9999999865 36666433     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +++++|+||+|.++.+++...++..+.+..+++|+++||||.||+||+|+||+++++++        ++.+.........
T Consensus       219 ~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l--------~~~l~~~~~~~~~  290 (413)
T PLN00175        219 NDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL--------TWGVRQAHSFLTF  290 (413)
T ss_pred             cCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHH--------HHHHHHHHhhccC
Confidence            99999999999998887655566666655688999999999999999999999999888        6677766666667


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC--CC-ChHHHHHHHHHhcC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--GR-KSWDVFAEILEKTH  233 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~--~~-~~~~~~~~ll~~~g  233 (272)
                      +++.+.|.++.+++... ..++++.++.++++++.+.+.|++.|+.+..+++++|+|++++  +. ++.+++..+++++|
T Consensus       291 ~~s~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~g  369 (413)
T PLN00175        291 ATATPMQWAAVAALRAP-ESYYEELKRDYSAKKDILVEGLKEVGFKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVG  369 (413)
T ss_pred             CCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCC
Confidence            78999999999999743 5788999999999999999999999999998889999999984  33 45788888888889


Q ss_pred             eEeeCCCCCCC---CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          234 ITTVPGSGFGP---GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       234 i~v~~g~~~~~---~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      |.+.||+.|+.   .+.+++|++++.+++++++++++|++++
T Consensus       370 V~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~  411 (413)
T PLN00175        370 VAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKL  411 (413)
T ss_pred             EEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHH
Confidence            99999999963   2467999999888999999999998864

>PRK08636 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.5e-42  Score=300.36  Aligned_cols=260  Identities=25%  Similarity=0.396  Sum_probs=217.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC------------CCCceEEEEecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG------------TSRTDIIFFCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~------------~~~~~~i~~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..|++. |...+...| +++++|++.++++.+|++.            .++++++++++||||||.++|.+++++
T Consensus       120 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~  199 (403)
T PRK08636        120 DVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYER  199 (403)
T ss_pred             CEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHH
Confidence            67888887777 778888889 9999999755567776442            257899999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024           70 LVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN  148 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~  148 (272)
                      |+++|++|+++||+||+|.++.+++. ..++..++...+++++++||||.||+||+|+||+++++++        ++.+.
T Consensus       200 l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~l--------i~~~~  271 (403)
T PRK08636        200 LVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKL--------VGALK  271 (403)
T ss_pred             HHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCHHH--------HHHHH
Confidence            99999999999999999999887653 3455566544567888999999999999999999998887        66676


Q ss_pred             hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC----ChHHH
Q 036024          149 RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR----KSWDV  224 (272)
Q Consensus       149 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~----~~~~~  224 (272)
                      +.......+.+.+.|.++..++. ....+++++++.++++++.+.+.|++.|+.+..+++|+|+|++++..    ++.++
T Consensus       272 ~~~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~l  350 (403)
T PRK08636        272 KIKSWLDYGMFTPIQVAATIALD-GDQSCVEEIRETYRKRRDVLIESFANAGWELQKPRASMFVWAKIPEPARHLGSLEF  350 (403)
T ss_pred             HHHHHhcccCChHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCcceEEEEECCCccCCCCHHHH
Confidence            66654445567778887776664 34578899999999999999999999898888888999999999842    35677


Q ss_pred             HHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          225 FAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ...+++++||.+.||..|+..+.+++|++++.+++++++++++|++++
T Consensus       351 ~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~~l  398 (403)
T PRK08636        351 SKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKKFL  398 (403)
T ss_pred             HHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            778888889999999999876678999999888899999999998764

>PRK06348 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.2e-42  Score=299.00  Aligned_cols=259  Identities=25%  Similarity=0.349  Sum_probs=220.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...++..| +++++|..+++++.+|++.     .++++++++++||||||.++|.+++++|+++|++
T Consensus       114 d~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~  193 (384)
T PRK06348        114 DEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIE  193 (384)
T ss_pred             CEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence            66778777766 888888889 9999998766677777554     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      ++++||+||+|.++.+++...++..+.+..+++++++||||.+|+||+|+||+++++++        ++.+.........
T Consensus       194 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~--------~~~~~~~~~~~~~  265 (384)
T PRK06348        194 YDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYI--------IETAKIINEGICF  265 (384)
T ss_pred             CCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHH--------HHHHHHHHHhccC
Confidence            99999999999999887644555555544678999999999999999999999999877        6677766665556


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC--CCChHHHHHHHHHhcC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKTH  233 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~g  233 (272)
                      +.+.+.|.++..++. ...++.++.++.++++++.+.+.|+.+ ++.+..+++|+|+|+.++  +.++.++...+++++|
T Consensus       266 ~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~g  344 (384)
T PRK06348        266 SAPTISQRAAIYALK-HRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAH  344 (384)
T ss_pred             CCCHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCC
Confidence            688999999998887 345778889999999999999999987 788888889999999997  3567788888888889


Q ss_pred             eEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          234 ITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       234 i~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      |.+.||+.|+..+.+++|++++.+++++++++++|++.
T Consensus       345 v~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~  382 (384)
T PRK06348        345 VLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM  382 (384)
T ss_pred             EEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence            99999999987667899999988899999999999864

>PRK08068 transaminase; Reviewed

Probab=100.00  E-value=1.9e-42  Score=299.97  Aligned_cols=259  Identities=28%  Similarity=0.440  Sum_probs=216.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...++..| +++++|++.+.++.+|++.     .++++++++++||||||.+++.+++++|+++|++
T Consensus       119 d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~  198 (389)
T PRK08068        119 DTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKK  198 (389)
T ss_pred             CEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHH
Confidence            66777777776 888888999 9999999877688877443     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +++++|+||+|.++.+++ .+.+.....+..+++++++||||+||+||+|+||+++++++        ++.+........
T Consensus       199 ~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l--------~~~l~~~~~~~~  270 (389)
T PRK08068        199 HNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESV--------IEAINLLQDHLF  270 (389)
T ss_pred             cCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHH--------HHHHHHHHhhcc
Confidence            999999999999887765 23344444334568899999999999999999999998887        666666665555


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi  234 (272)
                      .+.+.+.|.++.+++.+ ...++++.++.++++++.+.+.|+++|+.+..+++++|+|+.+++ .+..++...+++++||
T Consensus       271 ~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi  349 (389)
T PRK08068        271 VSLFGAIQDAAIEALLS-DQSCVAELVARYESRRNAFISACREIGWEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAHV  349 (389)
T ss_pred             CCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCCCCCHHHHHHHHHHhCCE
Confidence            55566678878777763 347889999999999999999999999988888888999999974 4667788888877899


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      .+.||..|+..+.+++|++++.+++.+.+++++|+++
T Consensus       350 ~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~  386 (389)
T PRK08068        350 AVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGKL  386 (389)
T ss_pred             EEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence            9999999986667899999988888999999999864

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=100.00  E-value=4.2e-42  Score=297.41  Aligned_cols=258  Identities=30%  Similarity=0.459  Sum_probs=218.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...++..| +++++|++.++++.+|++.     .+++++++++|||||||.+++.+++++|+++|++
T Consensus       116 d~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~  195 (383)
T TIGR03540       116 DIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKE  195 (383)
T ss_pred             CEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHH
Confidence            66777777666 777888899 9999999877788777443     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +++++|+||+|.++.+++. ..++..+....+++++++||||.+|++|+|+||+++++++        ++.+........
T Consensus       196 ~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l--------~~~~~~~~~~~~  267 (383)
T TIGR03540       196 YNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADL--------IAGLGKVKTNVD  267 (383)
T ss_pred             cCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHH--------HHHHHHHHHhcc
Confidence            9999999999998887652 4455555444467899999999999999999999998877        566666655555


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi  234 (272)
                      .+++.+.|.++.+++.+ ..+++++.++.++++++.+.+.|++.|+.+..+++++|+|+.++ +.+..+++..+++++||
T Consensus       268 ~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi  346 (383)
T TIGR03540       268 SGVFQAIQYAAIAALNG-PQDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPKATFYVWVPVPEGYTSAEFAARLLEETGV  346 (383)
T ss_pred             cCCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCCcceEEEEECCCCCCHHHHHHHHHHHCCE
Confidence            56778889999999874 36788999999999999999999999999988888999999998 44667888888888899


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA  270 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~  270 (272)
                      .+.||+.|+..+.+++|++++.+++++.+++++|++
T Consensus       347 ~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~  382 (383)
T TIGR03540       347 VVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK  382 (383)
T ss_pred             EEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence            999999997656789999998889999999999975

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=100.00  E-value=8.6e-42  Score=295.69  Aligned_cols=258  Identities=31%  Similarity=0.499  Sum_probs=217.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...++..| +++.+|++.+.+|.+|++.     .+++++++++|||||||.+++.+++++|+++|++
T Consensus       118 d~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~  197 (385)
T PRK09276        118 DVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKK  197 (385)
T ss_pred             CEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            67888877776 777888889 9999999877688777443     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +++++|+||+|.++.+++. ..++..+....+++++++||||.+|++|+|+||+++++++        ++.+.+......
T Consensus       198 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l--------~~~~~~~~~~~~  269 (385)
T PRK09276        198 YDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADL--------IAGLGKVKSNVD  269 (385)
T ss_pred             CCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHH--------HHHHHHHHhhcc
Confidence            9999999999999887643 3455555444567899999999999999999999998887        566666555445


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi  234 (272)
                      .+.+.+.|.++..++.. ...++++.++.++++++.+.+.|++.|+++..+++++|+|+.+++ .+..++..++++++||
T Consensus       270 ~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~ll~~~gi  348 (385)
T PRK09276        270 SGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKLGLEVEPPKATFYVWAPVPKGYTSAEFATLLLDKAGV  348 (385)
T ss_pred             CCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEECCCCCCHHHHHHHHHHhCCE
Confidence            55677888888888863 457889999999999999999999999988888888999999974 4667788888887899


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA  270 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~  270 (272)
                      .+.||..|+..+++++|++++.+++++.+++++|.+
T Consensus       349 ~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~  384 (385)
T PRK09276        349 VVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK  384 (385)
T ss_pred             EECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence            999999998666789999998888999999999975

>PRK07682 hypothetical protein; Validated

Probab=100.00  E-value=3.6e-42  Score=297.38  Aligned_cols=260  Identities=28%  Similarity=0.369  Sum_probs=219.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...++..| ++++++++.++++.+|++.     .++++++++++||||||.+++.+++++|+++|++
T Consensus       106 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~  185 (378)
T PRK07682        106 DEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEK  185 (378)
T ss_pred             CEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHH
Confidence            66777777665 778888888 9999998765566666443     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +++++|+||+|.++.+++...++..+.+..+++++++||||.||+||+|+||+++++++        ++.+.+.......
T Consensus       186 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~--------i~~l~~~~~~~~~  257 (378)
T PRK07682        186 HDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYF--------SEAMLKIHQYSMM  257 (378)
T ss_pred             cCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHH--------HHHHHHHHHhhcc
Confidence            99999999999999887654455555544578999999999999999999999999887        6666655555555


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC--CCChHHHHHHHHHhcCe
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKTHI  234 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~gi  234 (272)
                      +++.+.|.++.+++++ ...++++.++.++++++.+.+.|+++|+++..|++++|+|+.++  +.+..++...+++++||
T Consensus       258 ~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv  336 (378)
T PRK07682        258 CAPTMAQFAALEALRA-GNDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKV  336 (378)
T ss_pred             CCCHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCE
Confidence            6788999999999974 34567889999999999999999999999888889999999885  44677888888877799


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+.||..|+..+++++|+|++.+++++++++++|++++
T Consensus       337 ~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l  374 (378)
T PRK07682        337 AVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFV  374 (378)
T ss_pred             EEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence            99999999866689999999888999999999998864

>PRK06207 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.4e-42  Score=297.25  Aligned_cols=260  Identities=20%  Similarity=0.270  Sum_probs=215.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecC---CCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG---PGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~---~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|.+. |...++..| ++++++++   .+.++.+|++.+     +++++++++|||||||.+++.+++++|+++
T Consensus       127 d~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~  206 (405)
T PRK06207        127 DKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAAL  206 (405)
T ss_pred             CEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHH
Confidence            67788877776 778888889 99999986   233566664432     568999999999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  152 (272)
                      |++++++||+||+|.++.+++. ..++..+....+++++++||||++|+||+|+||+++++++        ++.+.....
T Consensus       207 a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l--------~~~~~~~~~  278 (405)
T PRK06207        207 ARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAI--------IDRMEKLQA  278 (405)
T ss_pred             HHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHH--------HHHHHHHHh
Confidence            9999999999999999988654 3344444444689999999999999999999999998877        667766666


Q ss_pred             hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC--CChHHHHHHHH
Q 036024          153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG--RKSWDVFAEIL  229 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ll  229 (272)
                      ......+.+.|.++.+++.+ ...++++..+.++++++.+.+.|+.+ ++++..|++|+|+|++++.  .+..++...++
T Consensus       279 ~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l~  357 (405)
T PRK06207        279 IVSLRAAGYSQAVLRTWFSE-PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHDFVKILR  357 (405)
T ss_pred             HhccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCCCHHHHHHHHH
Confidence            55556777899999999874 33456777888899999999999887 8888888899999999984  35677888887


Q ss_pred             HhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          230 EKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +++||.+.||+.|+..+.+++|++++.+++++++++++|++++
T Consensus       358 ~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l  400 (405)
T PRK06207        358 LQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLI  400 (405)
T ss_pred             HhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            7789999999999866678999999888899999999998764

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=100.00  E-value=8.1e-42  Score=278.30  Aligned_cols=262  Identities=21%  Similarity=0.322  Sum_probs=228.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecC-CCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG-PGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~-~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..|.+. |.......| ++++.|+. +++.+..|++.+      +++|++++||||||||.+|+.++|.+|+++|
T Consensus       108 d~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc  187 (388)
T COG1168         108 DGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELC  187 (388)
T ss_pred             CeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHH
Confidence            67788777766 888999999 99999999 455577785553      5679999999999999999999999999999


Q ss_pred             HHcCCEEEEcccCCccccCC-CCCCccccCC-CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024           75 RNNGSIIIFDSAYAAYVTDG-CPRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~-~~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  152 (272)
                      .+||++||.||.|+++++.+ .+.+...+.. -.++.+.+.|.||+|.++|+++++++.+++..+      ...+.+...
T Consensus       188 ~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr------~~~~~~l~~  261 (388)
T COG1168         188 LRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELR------AKFLKRLKR  261 (388)
T ss_pred             HHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHH------HHHHHHHHH
Confidence            99999999999999999998 4555555532 247889999999999999999999999887742      233444445


Q ss_pred             hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCCCceEEEeecC--CCChHHHHHHH
Q 036024          153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPYVWAHFP--GRKSWDVFAEI  228 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~i~l~--~~~~~~~~~~l  228 (272)
                      ....++|.++..|..++++ .+..|++++.+.++.|++++.+.|++.  ++++..|++++.+|+++.  +.++.+....+
T Consensus       262 ~~~~~~n~lg~~A~~aAY~-~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~d~~l~~~l  340 (388)
T COG1168         262 NGLHGPSALGIIATEAAYN-QGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGLDDSELAEFL  340 (388)
T ss_pred             hcCCCCchHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCCChHHHHHHH
Confidence            6677799999999999998 777999999999999999999999987  999999999999999998  56667888999


Q ss_pred             HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +++.+|.+.+|+.||..|++++|+++..+++-+++++++|+.+|
T Consensus       341 l~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al  384 (388)
T COG1168         341 LEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRAL  384 (388)
T ss_pred             HHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998764

>PRK09148 aminotransferase; Validated

Probab=100.00  E-value=1.7e-41  Score=295.19  Aligned_cols=260  Identities=26%  Similarity=0.437  Sum_probs=218.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...+...| +++++|++.++++..++++     .++++++++++||||||.+++.+++++|+++|++
T Consensus       117 d~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~  196 (405)
T PRK09148        117 DVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKK  196 (405)
T ss_pred             CEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence            67888877776 777788889 9999999877666555443     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      ++++||+||+|.++.+++. ..++..+.+..+++++++||||.+|+||+|+||+++++++        ++.+........
T Consensus       197 ~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~--------i~~l~~~~~~~~  268 (405)
T PRK09148        197 HDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERL--------IAALTRVKSYLD  268 (405)
T ss_pred             cCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHH--------HHHHHHHHHHhc
Confidence            9999999999999887653 3345555444567899999999999999999999998887        677777666555


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC----ChHHHHHHHHHh
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR----KSWDVFAEILEK  231 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~----~~~~~~~~ll~~  231 (272)
                      .+++.+.|.++..++.+ ...++++.++.++++++.+.+.|..+|+.+..|++|+|+|+.++..    ...++...++++
T Consensus       269 ~~~~~~~q~~~~~~L~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~  347 (405)
T PRK09148        269 YGAFTPIQVAATAALNG-PQDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEK  347 (405)
T ss_pred             cCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHh
Confidence            56788999999999974 3578899999999999999999999998877788999999999742    346777888877


Q ss_pred             cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.||..|+..+.+++|+++..+.+++.+++++|.+++
T Consensus       348 ~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l  388 (405)
T PRK09148        348 ADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFL  388 (405)
T ss_pred             CCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            79999999999765678999999878899999999998764

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=100.00  E-value=1.6e-41  Score=294.84  Aligned_cols=257  Identities=23%  Similarity=0.333  Sum_probs=211.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...+...| +++++|++++++|.+|++.+     +++|+++++|||||||.+++.+++++|+++|++
T Consensus       118 d~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~  197 (396)
T PRK09147        118 PLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDR  197 (396)
T ss_pred             CEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHH
Confidence            56888888777 778888889 99999998777888885543     578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCc--c----ccC-CCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSI--Y----EIP-GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR  149 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~--~----~~~-~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~  149 (272)
                      |+++||+||+|.++.+++...+.  .    ... ...+++++++||||.+|+||+|+||+++++++        ++.+..
T Consensus       198 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l--------~~~~~~  269 (396)
T PRK09147        198 YGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAAL--------LKKFLL  269 (396)
T ss_pred             cCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHH--------HHHHHH
Confidence            99999999999998876531211  1    111 12478999999999999999999999999877        566665


Q ss_pred             hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHH
Q 036024          150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEIL  229 (272)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll  229 (272)
                      .......+.+.+.|.++.+.+..  .+++++.++.++++++.+.+.|... +.+..|++|+|+|++++ .++.+++..++
T Consensus       270 ~~~~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~~g~f~~~~~~-~~~~~~~~~ll  345 (396)
T PRK09147        270 YRTYHGCAMPPAVQAASIAAWND--EAHVRENRALYREKFDAVTPILAPV-LDVQLPDAGFYLWAKVP-GDDTEFARRLY  345 (396)
T ss_pred             HhhhcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCeeEEEEEECC-CCHHHHHHHHH
Confidence            55544556788888887777742  4678889999999999999999885 66667789999999998 45677888888


Q ss_pred             HhcCeEeeCCCCCCC------CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          230 EKTHITTVPGSGFGP------GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~------~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +++||.+.||..|+.      .+.+++|++++.+++++.+++++|++++
T Consensus       346 ~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~  394 (396)
T PRK09147        346 ADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDFC  394 (396)
T ss_pred             HhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence            888999999998863      2367999999888999999999998864

>PRK05942 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.2e-41  Score=291.41  Aligned_cols=259  Identities=28%  Similarity=0.429  Sum_probs=217.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...+...| +++++|++.+++|.+|++.     .+++|+++++|||||||.+++.+++++|+++|++
T Consensus       122 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~  201 (394)
T PRK05942        122 DVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARK  201 (394)
T ss_pred             CEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHH
Confidence            66777777776 666777888 9999999877677777443     2689999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +++++|+||+|.++.+++. ..++..+.+..+++++++||||.||+||+|+||+++++++        ++.+........
T Consensus       202 ~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l--------~~~l~~~~~~~~  273 (394)
T PRK05942        202 YEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHI--------IQGLRTLKTNLD  273 (394)
T ss_pred             cCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHH--------HHHHHHHHhhcc
Confidence            9999999999999887653 3455555444566799999999999999999999998877        667766665555


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi  234 (272)
                      .+.+.+.|.++..++. ...++.++.++.++++++.+.+.|++.|+.+..+++++|+|+.++. .++.++..++++++||
T Consensus       274 ~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV  352 (394)
T PRK05942        274 YGIFSALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGELGWNIPPTKATMYLWVPCPVGMGSTDFALNVLQKTGV  352 (394)
T ss_pred             cCCCHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeeEEEEECCCCCCHHHHHHHHHHHCCE
Confidence            5678888998988886 3356788999999999999999999889988888888999999984 4567777888888899


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      .+.||+.|+..+.+++|+++..+.+.+.+++++|.++
T Consensus       353 ~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~  389 (394)
T PRK05942        353 VVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA  389 (394)
T ss_pred             EEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence            9999999976667899999987888899999998764

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=3.6e-41  Score=296.85  Aligned_cols=260  Identities=20%  Similarity=0.285  Sum_probs=211.6

Q ss_pred             cccccccCccc-chHHhc-ccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVG-KYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~-~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..|++. |...+. ..| +++++|++.+++|.+|++.+           .++|+++++|||||||.+++.+++++
T Consensus       136 d~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~  215 (468)
T PLN02450        136 DAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNL  215 (468)
T ss_pred             CEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHH
Confidence            67888888777 666666 578 99999998777888874431           37899999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccCCccccCCC-CCCccccC--------CCCCceEEEecCccccCCCccceeEEEecccccccCC
Q 036024           70 LVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIP--------GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG  140 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~--------~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~  140 (272)
                      |+++|++++++||+||+|.++.+++. ..++....        ...+++++++||||.+|+||+|+||++++++.+    
T Consensus       216 ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l----  291 (468)
T PLN02450        216 LVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMV----  291 (468)
T ss_pred             HHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHH----
Confidence            99999999999999999998877653 33333221        135789999999999999999999999987652    


Q ss_pred             cchHHHHHhhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC
Q 036024          141 FPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG  218 (272)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~  218 (272)
                         ...+....  .....+.+.|.++..++.+..+  .++++.++.++++++.+.+.|+++|+.+..+++|+|+|++++.
T Consensus       292 ---~~~~~~~~--~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~  366 (468)
T PLN02450        292 ---VSAATKMS--SFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRH  366 (468)
T ss_pred             ---HHHHHHHh--hcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchH
Confidence               33333332  2233688999999999986554  4688899999999999999999999998888899999999972


Q ss_pred             -C------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          219 -R------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       219 -~------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                       .      ...+++..+++++||.+.||+.|+..+++++|++++. +++++++++++|++++
T Consensus       367 ~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l  428 (468)
T PLN02450        367 LLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFV  428 (468)
T ss_pred             hcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHH
Confidence             1      1245777888888999999999987678999999985 8899999999998763

>PRK05839 hypothetical protein; Provisional

Probab=100.00  E-value=7.1e-41  Score=288.46  Aligned_cols=252  Identities=21%  Similarity=0.272  Sum_probs=204.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      |.|++..|++. |...+...| ++++++++.+++|.+|+..  .+++|+++++|||||||.+++.+++++|+++|+++|+
T Consensus       110 d~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~  189 (374)
T PRK05839        110 PTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDF  189 (374)
T ss_pred             CEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhhhccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCC
Confidence            55777767666 888889999 9999999877789888543  3679999999999999999999999999999999999


Q ss_pred             EEEEcccCCccccCCCCCCcccc-----CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEI-----PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ++|+||+|.++.+++...++...     ....+++++++||||.||+||+|+||+++++++        ++.+.......
T Consensus       190 ~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~--------~~~~~~~~~~~  261 (374)
T PRK05839        190 ILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASI--------LKKYKAYRTYL  261 (374)
T ss_pred             EEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHH--------HHHHHHHHhhc
Confidence            99999999987654433333321     123378999999999999999999999998777        56666655544


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCe
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHI  234 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi  234 (272)
                      ....+.+.|.++..++.+  ..++++.+++++++++.+.+.|   ++.  .|++|+|+|++++  +..++..++++++||
T Consensus       262 ~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l---~~~--~p~gg~fi~~~~~--~~~~~~~~l~~~~gi  332 (374)
T PRK05839        262 GCASPLPLQKAAAVAWLD--DEHAEFFRNIYAKNLKLAREIL---GIT--IPPATFYVWLPVD--NDEEFTKKLYQNEGI  332 (374)
T ss_pred             CCCCChHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHhc---CCC--CCCeeEEEEEeCC--ChHHHHHHHHHHCCE
Confidence            455788888888877753  4577888999999999888765   433  5678999999997  456788888887899


Q ss_pred             EeeCCCCCCCC--CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          235 TTVPGSGFGPG--GEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       235 ~v~~g~~~~~~--~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+.||+.|+..  +++++|+|+..+++++.+++++|++++
T Consensus       333 ~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l  372 (374)
T PRK05839        333 KVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYL  372 (374)
T ss_pred             EEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence            99999988743  368999999778999999999998864

>PRK07683 aminotransferase A; Validated

Probab=100.00  E-value=9.6e-41  Score=288.99  Aligned_cols=259  Identities=24%  Similarity=0.371  Sum_probs=217.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...++..| ++++++.+.+ ++.+|.+.     .++++++++++||||||.+++.+++++|+++|++
T Consensus       114 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~  192 (387)
T PRK07683        114 TEVILPAPIYPGYEPIIRLCGAKPVFIDTRST-GFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKD  192 (387)
T ss_pred             CEEEEcCCCccchHHHHHHcCCEEEEeecCcc-cCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence            66777777766 888888899 9999999754 77766332     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +++++|+||+|.++.+++...++....+.++++++++||||.+|+||+|+||+++++++        ++.+.........
T Consensus       193 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l--------~~~~~~~~~~~~~  264 (387)
T PRK07683        193 KNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYL--------AKHILKVHQYNVT  264 (387)
T ss_pred             cCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHH--------HHHHHHHHHhccC
Confidence            99999999999998877655566665445678999999999999999999999999887        5666655444444


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC--CChHHHHHHHHHhcCe
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG--RKSWDVFAEILEKTHI  234 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ll~~~gi  234 (272)
                      +++.+.|.++.+++.+ ...+.++.++.++++++.+.+.|.+.|+.+..+++++|+|+.++.  .++.++..++++++||
T Consensus       265 ~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI  343 (387)
T PRK07683        265 CASSISQYAALEALTA-GKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGL  343 (387)
T ss_pred             CCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCE
Confidence            5677889989888874 345778889999999999999999999888888899999999873  4566777788888899


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+.||+.|+..+++++|++++.+++++.+++++|.+++
T Consensus       344 ~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l  381 (387)
T PRK07683        344 AVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFL  381 (387)
T ss_pred             EEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            99999999876679999999888999999999998753

>PRK06290 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.4e-41  Score=291.63  Aligned_cols=255  Identities=27%  Similarity=0.401  Sum_probs=214.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...++..| +++++|++++++|.+|++.+     +++|++++++||||||.+++.+++++|+++|++
T Consensus       131 d~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~  210 (410)
T PRK06290        131 DVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKE  210 (410)
T ss_pred             CEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence            66777777776 778888899 99999999877887775532     578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      ++++||+||+|.++.+++.+.++..+....+++|+++||||.+|+||+|+||+++++++        ++.+.........
T Consensus       211 ~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l--------~~~l~~~~~~~~~  282 (410)
T PRK06290        211 NNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELI--------VKAFATVKDNNDS  282 (410)
T ss_pred             cCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHH--------HHHHHHHHhcccc
Confidence            99999999999998876544565555444567899999999999999999999998887        6677766666666


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC--------ChHHHHHHH
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR--------KSWDVFAEI  228 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~--------~~~~~~~~l  228 (272)
                      +.+.++|.++..++.+.  ++.++.+++++++++.+.+.|++.|+.+..+++++++|+.++..        +..+++..|
T Consensus       283 ~~~~~~q~aa~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~L  360 (410)
T PRK06290        283 GQFIAIQKAGIYALDHP--EITEKIREKYSRRLDKLVKILNEVGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYL  360 (410)
T ss_pred             CCcHHHHHHHHHHhhCc--HHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHH
Confidence            66778999999999753  56788999999999999999999999988888899999999742        567888999


Q ss_pred             HHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHhC
Q 036024          229 LEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEALF  272 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~l  272 (272)
                      +++.++.+.||+.|+    +++|++++   .++++.++++++|++.|
T Consensus       361 l~~~~v~~~p~~~~~----~~lRi~~~~~~~~~~~~~~~~~~l~~~~  403 (410)
T PRK06290        361 IKEKLISTVPWDDAG----HFLRFSVTFEAKDEEEEDRILEEIKRRL  403 (410)
T ss_pred             HHhCCEEEECCcccc----CeEEEEEEcccccccchhHHHHHHHHHH
Confidence            999888888988663    69999986   36778888888887764

>PRK12414 putative aminotransferase; Provisional

Probab=100.00  E-value=9.6e-41  Score=288.71  Aligned_cols=257  Identities=23%  Similarity=0.329  Sum_probs=212.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...++..| +++.+|++++ ++.+|++.     .+++|+++++|||||||.+++.+++++|+++|++
T Consensus       115 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~  193 (384)
T PRK12414        115 DEVIYFEPSFDSYAPIVRLQGATPVAIKLSPE-DFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRN  193 (384)
T ss_pred             CEEEEeCCCccchHHHHHHcCCEEEEEecCcc-ccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHH
Confidence            66777777765 777778888 9999998754 56666433     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +++++|+||+|.++.+++. ..++..+....+++++++||||.+|+||+|+||+++++++        ++.+........
T Consensus       194 ~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l--------~~~l~~~~~~~~  265 (384)
T PRK12414        194 TDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAEL--------MDEIRKVHQFMV  265 (384)
T ss_pred             CCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHH--------HHHHHHHHhhee
Confidence            9999999999999887653 3345444444568999999999999999999999999887        667777666566


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC---CChHHHHHHHHHhc
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG---RKSWDVFAEILEKT  232 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~~  232 (272)
                      .+++.+.|.++.+++.+...  ..+.++.++++++.+.+.|++.|+.+.++++++|+|+.++.   ..+.+++.++++++
T Consensus       266 ~~~s~~~q~a~~~~l~~~~~--~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~  343 (384)
T PRK12414        266 FSADTPMQHAFAEALAEPAS--YLGLGAFYQRKRDLLARELAGSRFELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDA  343 (384)
T ss_pred             cCCCcHHHHHHHHHhcCChH--HHHHHHHHHHHHHHHHHHHHhCCCeecCCCcceEEEEcccccCCCCHHHHHHHHHHhC
Confidence            67889999999999975432  24578899999999999999999998888899999998863   34667787888888


Q ss_pred             CeEeeCCCCCCCCC--CCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          233 HITTVPGSGFGPGG--EEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       233 gi~v~~g~~~~~~~--~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      ||.+.||+.|+..+  .+++|++++.+++++++++++|.+.
T Consensus       344 gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~~  384 (384)
T PRK12414        344 RVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCSL  384 (384)
T ss_pred             CEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhhC
Confidence            99999999996432  5799999988899999999999763

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=100.00  E-value=4.5e-42  Score=282.45  Aligned_cols=259  Identities=27%  Similarity=0.413  Sum_probs=225.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecC------CCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG------PGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~------~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      |.|+|..||++ |.......| ..+.+++.      .-..|.+|.+.     .+++|+|++|+||||||.++++++|++|
T Consensus       118 DeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~i  197 (420)
T KOG0257|consen  118 DEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELERI  197 (420)
T ss_pred             CEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHH
Confidence            78999999999 889999999 99999998      44568888443     4899999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024           71 VEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR  149 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~  149 (272)
                      +++|++||+++|.||+|.++.+++. ..+...++++.++++-++|+||++|+.|||+||+++++.+        ......
T Consensus       198 a~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L--------~~~~~~  269 (420)
T KOG0257|consen  198 AELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHL--------YSALFP  269 (420)
T ss_pred             HHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHh--------hhhHHH
Confidence            9999999999999999999999986 6788888999999999999999999999999999996666        666666


Q ss_pred             hhhhccCCcchHHHHHHHHhccccc-------HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC----
Q 036024          150 IICTCFNGASNIAQAGGLACLSSEG-------LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG----  218 (272)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~----  218 (272)
                      .........+++.|.|.++++....       ..+.+++.+.|+++++.+.+.|.++|+++..|++++|+|++++.    
T Consensus       270 vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~gayyl~adfs~~~~~  349 (420)
T KOG0257|consen  270 VHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPEGAYYLWADFSLAKSW  349 (420)
T ss_pred             HhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceEEEEeccccccC
Confidence            6677777789999998888887333       14566699999999999999999999999999999999999971    


Q ss_pred             ---------CChHHHHHHHHHhcCeEeeCCCCCCCCC-----CCeEEEEccCCHHHHHHHHHHHHH
Q 036024          219 ---------RKSWDVFAEILEKTHITTVPGSGFGPGG-----EEYIRISGFGHRESILEASRRLEA  270 (272)
Q Consensus       219 ---------~~~~~~~~~ll~~~gi~v~~g~~~~~~~-----~~~~R~s~~~~~~~i~~~l~~l~~  270 (272)
                               .++-.+...++++.|+.+.|++.|+...     .+.+|++++.+++-++.+.++|++
T Consensus       350 ~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~~  415 (420)
T KOG0257|consen  350 PFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLKK  415 (420)
T ss_pred             CcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHhh
Confidence                     1344577889999999999999998542     567889988899999999999873

>PRK08960 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-40  Score=288.71  Aligned_cols=258  Identities=22%  Similarity=0.353  Sum_probs=216.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...+...| +++.+|++.++++.+|++.+     ++++++++++||||||.+++.+++++|+++|++
T Consensus       117 d~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~  196 (387)
T PRK08960        117 KHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRA  196 (387)
T ss_pred             CEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHH
Confidence            67777777666 777888888 99999998777777775542     568899999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +++++|+||+|.++.+++...++..   ..+++++++||||.+|++|+|+||+++++++        ++.+.........
T Consensus       197 ~~~~li~De~Y~~~~~~~~~~~~~~---~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~--------~~~~~~~~~~~~~  265 (387)
T PRK08960        197 RGGHLVVDEIYHGLTYGVDAASVLE---VDDDAFVLNSFSKYFGMTGWRLGWLVAPPAA--------VPELEKLAQNLYI  265 (387)
T ss_pred             cCCEEEEEccccccccCCCCCChhh---ccCCEEEEeecccccCCcccEEEEEEcCHHH--------HHHHHHHHhhhcc
Confidence            9999999999999887654444433   3468899999999999999999999999887        6667666665566


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-ecCCCceEEEeecCC--CChHHHHHHHHHhcC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV-YGGINAPYVWAHFPG--RKSWDVFAEILEKTH  233 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~i~l~~--~~~~~~~~~ll~~~g  233 (272)
                      +.+.+.|.++.+++.+....++++.++.++++++.+.+.|+.+|+.+ ..|++|+|+|++++.  .++.+++.++++++|
T Consensus       266 ~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~g  345 (387)
T PRK08960        266 SASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEH  345 (387)
T ss_pred             CCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCC
Confidence            68889999999988754457889999999999999999999988765 457789999999974  466777888888889


Q ss_pred             eEeeCCCCCCCC-CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          234 ITTVPGSGFGPG-GEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       234 i~v~~g~~~~~~-~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      |.+.||+.|+.. ..+++|++++.+.+++.+++++|++++
T Consensus       346 i~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~  385 (387)
T PRK08960        346 VAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGL  385 (387)
T ss_pred             EEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            999999999753 357999999888889999999998864

>PRK09082 methionine aminotransferase; Validated

Probab=100.00  E-value=5.1e-41  Score=290.73  Aligned_cols=258  Identities=20%  Similarity=0.273  Sum_probs=218.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. +...++..| ++++++++.+ ++.+|++.     .++++++++++||||||.+++++++++|+++|++
T Consensus       116 d~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~  194 (386)
T PRK09082        116 DEVIVFDPSYDSYAPAIELAGGRAVRVALQPP-DFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAG  194 (386)
T ss_pred             CEEEEeCCCchhhHHHHHHcCCEEEEEecCcc-cccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence            56777777776 777788888 9999999755 57777443     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +++++|+||+|.++.+++. ..++..+.+..+++++++||||.+|++|+|+||+++++++        ++.+........
T Consensus       195 ~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l--------~~~~~~~~~~~~  266 (386)
T PRK09082        195 TDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAAL--------SAEFRKVHQYNT  266 (386)
T ss_pred             CCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHH--------HHHHHHHHhhhc
Confidence            9999999999999888653 4555566555678999999999999999999999999877        677777766556


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC---CCChHHHHHHHHHhc
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP---GRKSWDVFAEILEKT  232 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~---~~~~~~~~~~ll~~~  232 (272)
                      .+++.++|.++.+++.. ..++.++.++.++++++.+.+.|++.|+++.++++++|+|+.++   +.+..+++..+++++
T Consensus       267 ~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~  345 (386)
T PRK09082        267 FTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREH  345 (386)
T ss_pred             CCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCeeEEEEEeccccCCCCHHHHHHHHHHhC
Confidence            66899999988888863 45778889999999999999999999999988889999999987   345778888888899


Q ss_pred             CeEeeCCCCCC--CCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          233 HITTVPGSGFG--PGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       233 gi~v~~g~~~~--~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      ||.+.||+.|+  +.+.+++|++++.+++++++++++|+++
T Consensus       346 ~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~~  386 (386)
T PRK09082        346 GVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQL  386 (386)
T ss_pred             CEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhhC
Confidence            99999999885  3356899999988899999999999863

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=1.2e-40  Score=294.61  Aligned_cols=260  Identities=18%  Similarity=0.277  Sum_probs=209.9

Q ss_pred             cccccccCccc-chHHhc-ccc-eeEEeecCCCCCcccCCCC-----------CCCceEEEEecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVG-KYC-NIEYLECGPGNNFFPDLKG-----------TSRTDIIFFCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~-~~g-~~~~~~~~~~~~~~~dl~~-----------~~~~~~i~~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..|++. |...++ ..| +++++|++.++++.+|++.           ..++|+++++|||||||.+++.+++++
T Consensus       144 D~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~  223 (496)
T PLN02376        144 DVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTN  223 (496)
T ss_pred             CEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHH
Confidence            67888888777 666566 578 9999999866667666443           247899999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccCCccccCCC-CCCccccCC-------CCCceEEEecCccccCCCccceeEEEecccccccCCc
Q 036024           70 LVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPG-------AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF  141 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~-------~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~  141 (272)
                      |+++|+++++++|+||+|.++.+++. ..++..+..       ..+++++++||||.||+||+|+||++++++.+     
T Consensus       224 L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l-----  298 (496)
T PLN02376        224 LVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSV-----  298 (496)
T ss_pred             HHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHH-----
Confidence            99999999999999999999887653 445544421       12467889999999999999999999976652     


Q ss_pred             chHHHHHhhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC
Q 036024          142 PVINDFNRIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR  219 (272)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~  219 (272)
                        ...+... .. ....+.+.|.++.+++.+..+  +++.+.++.++++++.+.+.|++.|+.+..+++|+|+|++++..
T Consensus       299 --~~~~~~~-~~-~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~  374 (496)
T PLN02376        299 --VSCARKM-SS-FGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHL  374 (496)
T ss_pred             --HHHHHHH-hh-cCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhh
Confidence              3333222 22 234788999999999986554  67788899999999999999999999998888999999999731


Q ss_pred             --------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          220 --------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       220 --------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                              ...+++..+++++||.+.||+.|+...++++|++++. +++++++++++|++++
T Consensus       375 ~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l  436 (496)
T PLN02376        375 LRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFV  436 (496)
T ss_pred             hccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence                    1256777788888999999999987678999999975 7889999999998763

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=100.00  E-value=2.4e-40  Score=287.28  Aligned_cols=255  Identities=23%  Similarity=0.365  Sum_probs=208.6

Q ss_pred             cccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      |++..|++. |...+...| +++++|++++++|.+|++.     .+++|+++++|||||||.+++.+++++|+++|++++
T Consensus       119 vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~  198 (393)
T TIGR03538       119 VVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYG  198 (393)
T ss_pred             EEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCC
Confidence            666666665 788888889 9999999877788888543     257899999999999999999999999999999999


Q ss_pred             CEEEEcccCCccccCCC--CCCcc-c---cC-CCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh
Q 036024           79 SIIIFDSAYAAYVTDGC--PRSIY-E---IP-GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII  151 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~--~~~~~-~---~~-~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~  151 (272)
                      ++||+||+|.++.+++.  ..+.. .   .. ...+++++++||||.++++|+|+||+++++++        ++.+....
T Consensus       199 ~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l--------~~~~~~~~  270 (393)
T TIGR03538       199 FIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEI--------LKAFLRYR  270 (393)
T ss_pred             EEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHH--------HHHHHHHH
Confidence            99999999998887642  22221 1   11 13468999999999999999999999999877        56666665


Q ss_pred             hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHh
Q 036024          152 CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEK  231 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~  231 (272)
                      .....+.+.+.|.++.+.+..  .+++++.++.++++++.+.+.|++. +.+..+++|+|+|++++ .++.++...++++
T Consensus       271 ~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~gg~f~~~~~~-~~~~~~~~~l~~~  346 (393)
T TIGR03538       271 TYHGCAMPIPTQLASIAAWND--EQHVRENRALYREKFAAVLEILGQV-LDLELPDAGFYLWPKVP-GDDEAFARALYEE  346 (393)
T ss_pred             HhhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh-CcccCCCeeEEEEEECC-CCHHHHHHHHHHH
Confidence            544555788889888777753  4678889999999999999999875 55667789999999998 4566778788888


Q ss_pred             cCeEeeCCCCCCC------CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGP------GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~------~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.||+.|+.      .+.+++|++++.+++++++++++|++++
T Consensus       347 ~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~  393 (393)
T TIGR03538       347 ENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSFI  393 (393)
T ss_pred             CCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHhC
Confidence            8999999999862      2367999999888999999999998864

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK07324 transaminase; Validated

Probab=100.00  E-value=3.7e-40  Score=283.77  Aligned_cols=255  Identities=23%  Similarity=0.305  Sum_probs=215.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...++..| +++.+|++.+++|.+|++.     .+++|++++++||||||.+++.+++++|+++|++
T Consensus       105 d~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~  184 (373)
T PRK07324        105 DHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARS  184 (373)
T ss_pred             CEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            56777776665 777788899 9999999987788887544     2688999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +|+++|+||+|.++.+++...++..   ..+++|+++||||.+|++|+|+||+++++++        ++.+.+.+.....
T Consensus       185 ~~~~ii~De~y~~l~~~~~~~s~~~---~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~l--------i~~~~~~~~~~~~  253 (373)
T PRK07324        185 VDAYVLSDEVYRPLDEDGSTPSIAD---LYEKGISTNSMSKTYSLPGIRVGWIAANEEV--------IDILRKYRDYTMI  253 (373)
T ss_pred             CCCEEEEEccccccccCCCCCChhh---ccCCEEEEecchhhcCCccceeEEEecCHHH--------HHHHHHHhCcEEe
Confidence            9999999999999887654334433   2457899999999999999999999998777        6777777766556


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI  234 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi  234 (272)
                      +.+.+.|.++..++. ....+++++++.++++++.+.+.|++. ++.+..|++|+++|+.++ ..+..+++.++++++||
T Consensus       254 ~~~~~~q~~a~~~l~-~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv  332 (373)
T PRK07324        254 CAGVFDDMLASLALE-HRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDMPSEDFCLKLLKETGV  332 (373)
T ss_pred             cCChHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCCCHHHHHHHHHHhcCE
Confidence            678888988888876 344678889999999999999999887 788888888899899887 45677888999888899


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+.||+.|+.  ++++|+|++.+++.+.+++++|++++
T Consensus       333 ~v~pg~~F~~--~~~iRis~~~~~~~l~~~l~rl~~~l  368 (373)
T PRK07324        333 LLVPGNRFDL--EGHVRIGYCCDTETLKKGLKKLSEFL  368 (373)
T ss_pred             EEECccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            9999999975  57999999888999999999998764

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=2.8e-40  Score=289.12  Aligned_cols=260  Identities=19%  Similarity=0.307  Sum_probs=211.1

Q ss_pred             cccccccCccc-chHHhc-ccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVG-KYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~-~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..|++. |...+. +.| ++++++++.+++|.+|++..           .++|+++++|||||||.+++++++++
T Consensus       145 D~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~  224 (447)
T PLN02607        145 DALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLED  224 (447)
T ss_pred             CEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHH
Confidence            67888888877 666665 567 99999998777777774442           47899999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccCCccccCCC-CCCccccC------CCCCceEEEecCccccCCCccceeEEEecccccccCCcc
Q 036024           70 LVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIP------GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFP  142 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~------~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~  142 (272)
                      |+++|+++++.+|+||+|.++.+++. ..++.++.      +..++++++.|+||.||++|+|+||+++.++.+      
T Consensus       225 l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l------  298 (447)
T PLN02607        225 ILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKV------  298 (447)
T ss_pred             HHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHH------
Confidence            99999999999999999998877643 34544331      125789999999999999999999999855442      


Q ss_pred             hHHHHHhhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC-
Q 036024          143 VINDFNRIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR-  219 (272)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~-  219 (272)
                       ...+....  .....+.+.|.++..++.+..+  +++++.+++++++++.+.+.|++.|+.+..+++|+|+|++++.. 
T Consensus       299 -~~~~~~~~--~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~  375 (447)
T PLN02607        299 -VTTARRMS--SFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLL  375 (447)
T ss_pred             -HHHHHHHh--hcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhh
Confidence             33333222  2224688899999999987554  67888999999999999999999999988888999999999731 


Q ss_pred             -----C-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          220 -----K-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       220 -----~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                           + ..+++.++++++||.+.||+.|+...++++|++++. +++.+++++++|.+++
T Consensus       376 ~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l  435 (447)
T PLN02607        376 ETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFM  435 (447)
T ss_pred             cCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Confidence                 1 235667888888999999999987778999999985 8899999999998764

>PRK07337 aminotransferase; Validated

Probab=100.00  E-value=4.6e-40  Score=285.11  Aligned_cols=258  Identities=31%  Similarity=0.479  Sum_probs=214.6

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++++|++.++++.+|++.     .++++++++++||||||.+++.+++++|+++|++
T Consensus       115 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~  194 (388)
T PRK07337        115 DEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRA  194 (388)
T ss_pred             CEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHH
Confidence            66777777666 777777788 9999999876677777544     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +++++|+||+|.++.+.+...+...+   .+++++++|+||.+|+||+|+||+++++++        ++.+.........
T Consensus       195 ~~~~ii~De~y~~~~~~~~~~~~~~~---~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l--------~~~l~~~~~~~~~  263 (388)
T PRK07337        195 RGGFTIVDEIYQGLSYDAAPVSALSL---GDDVITINSFSKYFNMTGWRLGWLVVPEAL--------VGTFEKLAQNLFI  263 (388)
T ss_pred             CCCEEEEeccccccccCCCCcChhhc---cCCEEEEEechhhcCCchhheeeeecCHHH--------HHHHHHHHHHhcc
Confidence            99999999999988776543333332   467899999999999999999999999877        6677766655555


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-ecCCCceEEEeecCC------CChHHHHHHHH
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV-YGGINAPYVWAHFPG------RKSWDVFAEIL  229 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~i~l~~------~~~~~~~~~ll  229 (272)
                      +.+.+.|.++..++.+....+.++.++.++++++.+.+.|+++|+.+ ..|++|+|+|++++.      .++.++..+++
T Consensus       264 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll  343 (388)
T PRK07337        264 CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAML  343 (388)
T ss_pred             CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHH
Confidence            68889999999988755556678889999999999999999988765 467789999999974      35667788888


Q ss_pred             HhcCeEeeCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          230 EKTHITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +++||.+.||+.|+. .+.+++|++++.+++++.+++++|.+++
T Consensus       344 ~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l  387 (388)
T PRK07337        344 HDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF  387 (388)
T ss_pred             HhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence            888999999999974 3468999999888899999999999864

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=100.00  E-value=4.8e-40  Score=284.98  Aligned_cols=257  Identities=24%  Similarity=0.375  Sum_probs=211.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC--------CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT--------SRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~--------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|.+. |...++..| ++++++.+++ ++.+|++.+        ++++++++++||||||.+++.+++++|+++
T Consensus       116 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~  194 (391)
T PRK07309        116 DKVLLPAPAYPGYEPIVNLVGAEIVEIDTTEN-DFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADV  194 (391)
T ss_pred             CEEEEeCCCCcchHHHHHHcCCEEEEEecCCc-CCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHH
Confidence            66777777666 888888899 9999998654 566663321        368999999999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  152 (272)
                      |++|++++|+||+|.++.+++. ..++...  ..+++++++||||.||+||+|+||+++++++        ++.+.....
T Consensus       195 ~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~--------~~~~~~~~~  264 (391)
T PRK07309        195 LKKYDIFVISDEVYSELTYTGEPHVSIAEY--LPDQTILINGLSKSHAMTGWRIGLIFAPAEF--------TAQLIKSHQ  264 (391)
T ss_pred             HHHcCcEEEEEccccceeeCCCCCCCHHHh--ccCCEEEEecChhhccCccceeEEEEeCHHH--------HHHHHHHHh
Confidence            9999999999999999988543 3344444  3478999999999999999999999999888        566665554


Q ss_pred             hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC---ChHHHHHHHH
Q 036024          153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR---KSWDVFAEIL  229 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~---~~~~~~~~ll  229 (272)
                      ....+++.+.|.++..++.+.. .+....+++++++++.+.+.|++.|+.+..+++|+|+|+.++..   ++.++..+++
T Consensus       265 ~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~  343 (391)
T PRK07309        265 YLVTAATTMAQFAAVEALTNGK-DDALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFA  343 (391)
T ss_pred             hcccCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEECCCCCCCCHHHHHHHHH
Confidence            4445678899999999987533 33466788999999999999999999998888899999998742   4567777888


Q ss_pred             HhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          230 EKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +++||.+.||+.|+..+.+++|+++..+.+++++++++|++++
T Consensus       344 ~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~  386 (391)
T PRK07309        344 RKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYM  386 (391)
T ss_pred             HhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            8889999999999877789999999888889999999998763

>PRK08912 hypothetical protein; Provisional

Probab=100.00  E-value=3.2e-40  Score=285.96  Aligned_cols=259  Identities=18%  Similarity=0.224  Sum_probs=213.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...++..| ++++++++.+ ++.+|++.     .+++|++++++||||||.+++.+++++|+++|++
T Consensus       112 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~  190 (387)
T PRK08912        112 DEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPP-HWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQR  190 (387)
T ss_pred             CEEEEeCCCchhhHHHHHHcCCEEEEEecCcc-cCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence            66788777766 888889999 9999998754 45566443     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +++++|+||+|.++.+++. ..++..+.+..+++++++|+||.+|++|+|+||+++++++        ++.+........
T Consensus       191 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~--------~~~l~~~~~~~~  262 (387)
T PRK08912        191 HDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPL--------LRVLAKAHQFLT  262 (387)
T ss_pred             CCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHH--------HHHHHHHHhhcc
Confidence            9999999999998887653 3455555444578999999999999999999999999887        556655555444


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC----CChHHHHHHHHHh
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG----RKSWDVFAEILEK  231 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~----~~~~~~~~~ll~~  231 (272)
                      .+.+...|.++...+. ...+++++.++.++++++.+.+.|+..|+.+.++++++|+|+.++.    .+..+++..++++
T Consensus       263 ~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~  341 (387)
T PRK08912        263 FTTPPNLQAAVAYGLG-KPDDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEE  341 (387)
T ss_pred             ccCChHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEecccccCCCCCHHHHHHHHHhc
Confidence            4566677888877776 3356778899999999999999999999998888889999999974    3566788888888


Q ss_pred             cCeEeeCCCCCCC--CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGP--GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~--~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.||..|+.  .+.+++|++++.+++++++++++|++++
T Consensus       342 ~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l  384 (387)
T PRK08912        342 AGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAAR  384 (387)
T ss_pred             CCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHH
Confidence            8999999999863  3468999999888899999999998864

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=100.00  E-value=4.9e-40  Score=281.11  Aligned_cols=254  Identities=24%  Similarity=0.335  Sum_probs=211.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...+...| ++++++++.+++|.+|++.     .+++|++++++||||||.+++.+++++|+++|++
T Consensus        88 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~  167 (350)
T TIGR03537        88 RRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCRE  167 (350)
T ss_pred             ceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence            57888777766 888889999 9999999866688777443     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +|+++|+||+|.++.+++...++...  ..+++++++|+||.+|++|+|+||+++++++        .+.+.........
T Consensus       168 ~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~--------~~~~~~~~~~~~~  237 (350)
T TIGR03537       168 HGIILCSDECYTEIYFGEPPHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVAGDEKL--------ISFLRKLRANFGV  237 (350)
T ss_pred             cCcEEEEeccccccccCCCCCchhhc--CcCCEEEEeecccccCCccccceeeecCHHH--------HHHHHHHHHhhcc
Confidence            99999999999987766544444443  3468999999999999999999999988777        5666666655555


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeE
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHIT  235 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~  235 (272)
                      +.+...|.++.+.+..  ..+.++.+++++++++.+.+.|+..|+++..+++++|+|+.++. .+..++...|++ +||.
T Consensus       238 ~~~~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~~~L~~-~gv~  314 (350)
T TIGR03537       238 ASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYLWVKVPSGIDAKDYALRLLE-NGIV  314 (350)
T ss_pred             CCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeEEEEEEECCCCCCHHHHHHHHHH-CCEE
Confidence            5666778877776653  35668889999999999999999999988888889999999984 356777777776 4999


Q ss_pred             eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024          236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA  270 (272)
Q Consensus       236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~  270 (272)
                      +.||..|+....+++|++++.+++++++++++|++
T Consensus       315 v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~  349 (350)
T TIGR03537       315 VAPGENFGSGEEGYVRVALVPTLEECEEALRLWER  349 (350)
T ss_pred             EcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence            99999998666789999987788999999999976

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK06855 aminotransferase; Validated

Probab=100.00  E-value=4.6e-40  Score=288.05  Aligned_cols=266  Identities=21%  Similarity=0.215  Sum_probs=207.0

Q ss_pred             cccccccCccc-chHH-hcccc-eeEEeecCCCCCcccCCCCC-------CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDE-VGKYC-NIEYLECGPGNNFFPDLKGT-------SRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~dl~~~-------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|++. |... ....| +++++|++++++|.+|++.+       ++++++++++||||||.+++.+++++|+++
T Consensus       120 d~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~  199 (433)
T PRK06855        120 ARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDI  199 (433)
T ss_pred             CeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHH
Confidence            67888888877 4433 22346 88899998777887775442       467899999999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  152 (272)
                      |+++|++||+||+|.++.+++. ..++..+.. ..++|+++||||.+++||+|+||+++++......+.++...+.....
T Consensus       200 a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~  278 (433)
T PRK06855        200 AREYDLFIICDEIYNNIVYNGKKTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKM  278 (433)
T ss_pred             HHHcCCEEEEeccccccccCCCCCCCHHHHcC-cCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhc
Confidence            9999999999999999988653 345555532 23579999999999889999999998531100000111333332222


Q ss_pred             hccCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC-----------
Q 036024          153 TCFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR-----------  219 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~-----------  219 (272)
                       ....++.+.|.++.+++.+.. .++++++++.++++++.+.+.|+++ |+.+..|++|+|+|+.++..           
T Consensus       279 -~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~  357 (433)
T PRK06855        279 -IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIE  357 (433)
T ss_pred             -cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeeccccccccccccCCcc
Confidence             233477899999999998654 4789999999999999999999887 88888888999999999842           


Q ss_pred             -----------------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          220 -----------------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       220 -----------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                                       ++.+++..+++++||.+.||+.|+..+ .++|+|++. +.+++++++++|++++
T Consensus       358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~-~~~Rls~~~~~~~~i~~~~~~l~~~~  427 (433)
T PRK06855        358 NPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTEL-NGFRVTLLERDEEKFEWIYQTLAEKI  427 (433)
T ss_pred             hhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCC-CceEEEECCCcHHHHHHHHHHHHHHH
Confidence                             356777788888999999999997543 459999975 8899999999998864

>PRK06108 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7e-40  Score=283.63  Aligned_cols=260  Identities=28%  Similarity=0.425  Sum_probs=215.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCC-CCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPG-NNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~-~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..|.+. |...++..| +++++|++.+ .+|.+|++.+     ++++++++++||||||.+++.+++++|+++|+
T Consensus       109 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~  188 (382)
T PRK06108        109 DEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCR  188 (382)
T ss_pred             CEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHH
Confidence            56777766655 778888889 9999999753 3666664432     57899999999999999999999999999999


Q ss_pred             HcCCEEEEcccCCccccC-CC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           76 NNGSIIIFDSAYAAYVTD-GC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~-~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      ++++++|+||+|.++.++ +. ..++..+....+++++++||||.||++|+|+||+++++++        ++.+......
T Consensus       189 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~--------~~~~~~~~~~  260 (382)
T PRK06108        189 RHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPAL--------GQVLEKLIEY  260 (382)
T ss_pred             HCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHH--------HHHHHHHHHh
Confidence            999999999999998876 22 2333344333468999999999999999999999998877        5566555544


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC-CChHHHHHHHHHh
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG-RKSWDVFAEILEK  231 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~  231 (272)
                      ...+++.+.|.++..++.+ ..+++++.+++++++++.+.+.|++. |+.+..+++++|+|+.+++ .+..+++.+++++
T Consensus       261 ~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~~  339 (382)
T PRK06108        261 NTSCVAQFVQRAAVAALDE-GEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVTDSLALAKRLVDE  339 (382)
T ss_pred             cccCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCCCHHHHHHHHHHh
Confidence            4556788999999999974 35678899999999999999999887 8888888889999999974 3566788888888


Q ss_pred             cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.||+.|++.+.+++|+|++.+++++++++++|++++
T Consensus       340 ~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l  380 (382)
T PRK06108        340 AGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFL  380 (382)
T ss_pred             CCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            89999999999766678999999779999999999998864

>PRK08175 aminotransferase; Validated

Probab=100.00  E-value=5.8e-40  Score=284.94  Aligned_cols=260  Identities=26%  Similarity=0.432  Sum_probs=216.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++++++++++++..++++     .++++++++++||||||.+++.+++++|+++|++
T Consensus       116 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~  195 (395)
T PRK08175        116 DTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKR  195 (395)
T ss_pred             CEEEEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            67788777666 667778888 9999999877666444443     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +|+++|+||+|.++.+++. ..++..+.+..+++++++||||.||+||+|+||+++++++        ++.+.+......
T Consensus       196 ~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l--------~~~~~~~~~~~~  267 (395)
T PRK08175        196 YDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPEL--------VSALARIKSYHD  267 (395)
T ss_pred             cCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHH--------HHHHHHHHhhcc
Confidence            9999999999999887653 3444444444567899999999999999999999998877        667776665555


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC----ChHHHHHHHHHh
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR----KSWDVFAEILEK  231 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~----~~~~~~~~ll~~  231 (272)
                      .+++.+.|.++..++.. ...+++++++.++++++++.+.|+.+|+.+..+++|+|+|++++..    ++.+++..++++
T Consensus       268 ~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~  346 (395)
T PRK08175        268 YGTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNE  346 (395)
T ss_pred             cCCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHh
Confidence            56777888888888863 4578899999999999999999999998888888999999999842    356777788888


Q ss_pred             cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.||+.|+..+++++|+++..+++.+.+++++|.+++
T Consensus       347 ~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l  387 (395)
T PRK08175        347 AKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMF  387 (395)
T ss_pred             CCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence            89999999999876678999999878899999999998764

>PLN02187 rooty/superroot1

Probab=100.00  E-value=1.2e-39  Score=286.85  Aligned_cols=262  Identities=18%  Similarity=0.248  Sum_probs=209.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...+...| +++++++.++++|.+|++.+     +++++++++|||||||.+++.+++++|+++|++
T Consensus       156 d~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~  235 (462)
T PLN02187        156 ANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARK  235 (462)
T ss_pred             CEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHH
Confidence            67888777766 777788889 99999997666788885542     578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ++++||+||+|.++.+++.. .++..+.. ..++++++||||.|++||+|+||+++++ +.+.    .++..+.......
T Consensus       236 ~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~-~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~----~~~~~~~~~~~~~  310 (462)
T PLN02187        236 LGIMVISDEVYDRTIFGDNPFVSMGKFAS-IVPVLTLAGISKGWVVPGWKIGWIALNDPEGVF----ETTKVLQSIKQNL  310 (462)
T ss_pred             CCCEEEEeccccccccCCCCceeHHHhcc-CCcEEEEecchhhcCCccceeEEEEecCchhHH----HHHHHHHHHHHhc
Confidence            99999999999998886533 35555532 2468999999999999999999999853 2210    0123444444433


Q ss_pred             cC--CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC-e-EecCCCceEEEeecCC-----C-ChHHH
Q 036024          155 FN--GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI-K-VYGGINAPYVWAHFPG-----R-KSWDV  224 (272)
Q Consensus       155 ~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~-~~~~~~~~~~~i~l~~-----~-~~~~~  224 (272)
                      ..  +++.+.|.++.+++.+....++++.++.++++++.+.+.|++++. . +..|++|+|+|+.++.     . ++.++
T Consensus       311 ~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~  390 (462)
T PLN02187        311 DVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDF  390 (462)
T ss_pred             cccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHH
Confidence            33  357899999999997545688999999999999999999998853 3 2356789999998752     1 45577


Q ss_pred             HHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          225 FAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +.++++++||.+.||+.|+.  ++++|++++.+++++++++++|.+++
T Consensus       391 ~~~ll~~~gV~v~pG~~fg~--~~~iRis~~~~~e~l~~al~rL~~~l  436 (462)
T PLN02187        391 CVKLAREENLVFLPGDALGL--KNWMRITIGVEAHMLEDALERLKGFC  436 (462)
T ss_pred             HHHHHhhCCEEEECccccCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence            88888888999999999963  68999999888999999999998763

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=100.00  E-value=8e-40  Score=287.03  Aligned_cols=254  Identities=16%  Similarity=0.177  Sum_probs=208.6

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..|++. |...++..| +++++|++++ ++.+| +++  .+++|+++++ |||||||.+++.+++++|+++|+++
T Consensus       166 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~  244 (431)
T PRK15481        166 DSVAVEDPCFLSSINMLRYAGFSASPVSVDAE-GMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARY  244 (431)
T ss_pred             CEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC-CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhc
Confidence            67888888777 888889999 9999999755 55444 322  1578999998 9999999999999999999999999


Q ss_pred             -CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 -GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 -~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                       +++||+||+|.++.+.+. .+....  ..+++++++||||++| ||+|+||+++++++        ++.+.........
T Consensus       245 ~~~~ii~De~Y~~~~~~~~-~~~~~~--~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~--------~~~~~~~~~~~~~  312 (431)
T PRK15481        245 PQVLVIIDDHFALLSSSPY-HSVIPQ--TTQRWALIRSVSKALG-PDLRLAFVASDSAT--------SARLRLRLNSGTQ  312 (431)
T ss_pred             CCceEEecCchhhhccCCC-CCCCcC--CCCCEEEEeeeccccC-CCceeEEEeCCHHH--------HHHHHHHHhcccc
Confidence             999999999999876542 222222  3468999999999999 99999999999887        5666555554445


Q ss_pred             CcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeE
Q 036024          157 GASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHIT  235 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~  235 (272)
                      +.+.++|.++.+++.+... +++++.++.++++++.+.+.|++.|+.+..|++|+|+|+.++. +..++...+. ++||.
T Consensus       313 ~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~-~~~~~~~~l~-~~gV~  390 (431)
T PRK15481        313 WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDT-DSQATALTLA-KSGWL  390 (431)
T ss_pred             CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCC-CHHHHHHHHH-HCCcE
Confidence            5889999999999986554 7889999999999999999999999888778899999999985 4556666665 56999


Q ss_pred             eeCCCCCCCC-CCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          236 TVPGSGFGPG-GEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       236 v~~g~~~~~~-~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      +.||+.|+.. +.+++|++++. +++++++++++|++++
T Consensus       391 v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~  429 (431)
T PRK15481        391 VREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQAL  429 (431)
T ss_pred             EecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHh
Confidence            9999999643 34689999965 7889999999999874

>PRK05957 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-39  Score=281.81  Aligned_cols=259  Identities=22%  Similarity=0.311  Sum_probs=209.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      |.|++..|++. +...++..| ++++++.+.+.++.+| +++  .+++|+++++|||||||.+++.+++++|+++|+++|
T Consensus       114 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~  193 (389)
T PRK05957        114 DEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHG  193 (389)
T ss_pred             CEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcC
Confidence            66778766654 666677888 9999998643333333 322  267999999999999999999999999999999999


Q ss_pred             CEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024           79 SIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG  157 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (272)
                      +++|+||+|.++.+++.. .++..+.+..+++|+++||||.+|+||+|+||+++++++        ++.+.........+
T Consensus       194 ~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~--------~~~~~~~~~~~~~~  265 (389)
T PRK05957        194 IYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHL--------LEAIKKIQDTILIC  265 (389)
T ss_pred             cEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHH--------HHHHHHHHhhcccC
Confidence            999999999998876532 234444334568999999999999999999999998887        67777776665666


Q ss_pred             cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-C-CeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024          158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-G-IKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI  234 (272)
Q Consensus       158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g-~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi  234 (272)
                      ++.+.|.++..++.+ +..++++.+++++++++.+.+.|+.+ + +.+..+++|+|+|++++ +.++.+++.++++++||
T Consensus       266 ~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv  344 (389)
T PRK05957        266 PPVVSQYAALGALQV-GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRV  344 (389)
T ss_pred             CCcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCE
Confidence            788899998888874 33566778888999999999999987 5 36677788999999997 55677888998887899


Q ss_pred             EeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHh
Q 036024          235 TTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEAL  271 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~  271 (272)
                      .+.||+.|+..+.+++|++++ .+++++.+++++|.+.
T Consensus       345 ~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~  382 (389)
T PRK05957        345 AVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQG  382 (389)
T ss_pred             EEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHH
Confidence            999999998666679999995 4788899999998775

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=1.3e-39  Score=283.53  Aligned_cols=264  Identities=17%  Similarity=0.203  Sum_probs=207.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...+...| +++.++++++++|.+|++.+     +++++++++|||||||.+++.+++++|+++|++
T Consensus       122 d~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~  201 (409)
T PLN00143        122 ANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARK  201 (409)
T ss_pred             CEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHH
Confidence            66788777766 888888889 99999997666887775542     578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ++++||+||+|.++.+++.. .++..+. ..+++++++||||.|++||+|+||++++ ++.+.+. ......+.......
T Consensus       202 ~~~~ii~De~Y~~l~~~~~~~~~~~~~~-~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~-~~~~~~~~~~~~~~  279 (409)
T PLN00143        202 LGILVIADEVYGHIVFGSKPFVPMGLFA-SIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQI-CEIADSIKKALNPA  279 (409)
T ss_pred             cCCeEEEEccccccccCCCCCcchhhhc-ccCcEEEEccchhhcCCCccceEEEEeeCchhhhhh-HHHHHHHHHHHhcc
Confidence            99999999999998886543 3334442 3458999999999999999999999984 3321100 01123333333322


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC-eE-ecCCCceEEEeecCC------CChHHHHH
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI-KV-YGGINAPYVWAHFPG------RKSWDVFA  226 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~-~~~~~~~~~~i~l~~------~~~~~~~~  226 (272)
                      . .++.+.|.++.+++.+....++++.++.++++++.+.+.|.+++. .+ ..|++|+|+|++++.      .++.+++.
T Consensus       280 ~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~  358 (409)
T PLN00143        280 P-FPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCL  358 (409)
T ss_pred             C-CCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHH
Confidence            2 357789999999997545578889999999999999999988743 32 357789999999973      24667777


Q ss_pred             HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++++++||.+.||..|+.  .+++|++++.+++++++++++|++++
T Consensus       359 ~ll~~~gV~v~pg~~f~~--~~~iRi~~~~~~~~l~~al~rl~~~l  402 (409)
T PLN00143        359 KLAKEESLIILPGVTVGL--KNWLRITFAVEQSSLEDGLGRLKSFC  402 (409)
T ss_pred             HHHHhCCEEEeCccccCC--CCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence            888888999999999964  68999999888999999999998764

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=1.3e-39  Score=284.58  Aligned_cols=263  Identities=17%  Similarity=0.242  Sum_probs=211.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...+...| +++.+++.++.+|.+|++.+     +++++++++|||||||.+++.+++++|+++|++
T Consensus       142 d~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~  221 (430)
T PLN00145        142 ANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARK  221 (430)
T ss_pred             CEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            67888877776 777778888 99999987777888885542     678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEec--ccccccCCcchHHHHHhhhhh
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP--EELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~--~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +++++|+||+|.++.+++. ..++..+. ..+++++++||||.|++||+|+||++++  +..+..  ..+...+..... 
T Consensus       222 ~~i~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~--~~~~~~~~~~~~-  297 (430)
T PLN00145        222 LGILVIADEVYDHLTFGSKPFVPMGVFG-EVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKE--TKVVDSIRNYLN-  297 (430)
T ss_pred             cCCEEEEeccchhhccCCCCccchhhhc-ccCcEEEEeccccccCCCCeeEEEEEEecchhhhhh--hHHHHHHHHHhc-
Confidence            9999999999999888653 34544443 2468999999999999999999999974  222110  001223333322 


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEe-cCCCceEEEeecCC------CChHHHH
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVY-GGINAPYVWAHFPG------RKSWDVF  225 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~i~l~~------~~~~~~~  225 (272)
                      ....++.+.|.|+..++......++++.++.++++++.+.+.|+++ |+.+. .|++++|+|+.++.      .++.+++
T Consensus       298 ~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~  377 (430)
T PLN00145        298 ISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFC  377 (430)
T ss_pred             ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHH
Confidence            3334678999999999985456788999999999999999999987 77764 68899999999862      2466788


Q ss_pred             HHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          226 AEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .++++++||.+.||..|+.  ++++|+++..+.+++++++++|++++
T Consensus       378 ~~ll~~~gV~v~pG~~fg~--~~~lRis~~~~~~~l~~al~rl~~~~  422 (430)
T PLN00145        378 CKLAKEESVVVLPGSALGM--KNWLRITFAIDPPSLEDGLERLKSFC  422 (430)
T ss_pred             HHHHHhCCEEEeCccccCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence            8899999999999999975  68999999888889999999998763

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=100.00  E-value=1e-39  Score=286.25  Aligned_cols=257  Identities=25%  Similarity=0.353  Sum_probs=220.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCCC---CCceEEEEe-cCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKGT---SRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~---~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. ....++..| +++++|++++ |+.+| ++..   .++|++|++ +.|||||.++|.+++++|+++|++
T Consensus       180 d~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~-G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~  258 (459)
T COG1167         180 DTVLVEDPTYPGALQALEALGARVIPVPVDED-GIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEK  258 (459)
T ss_pred             CEEEEcCCCcHHHHHHHHHcCCcEEecCCCCC-CCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHH
Confidence            67888887777 778889999 9999999955 88888 4442   479999999 889999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCC-CccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGCPR-SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      ||++||+||.|+.+.+++.+. ++..++ ..++||+++||||+++ ||+|+||+++++++        ++.+...+....
T Consensus       259 ~~~~IIEDD~y~el~~~~~p~~~l~~ld-~~~rViy~gSFSK~l~-PglRlG~vv~p~~~--------~~~~~~~k~~~~  328 (459)
T COG1167         259 YDVLIIEDDYYGELRYDGPPPPPLKALD-APGRVIYLGSFSKTLA-PGLRLGYVVAPPEL--------IEKLLRLKQAAD  328 (459)
T ss_pred             cCCeEEeeCcchhhhcCCCCCCChHhhC-CCCCEEEEeeehhhcc-cccceeeeeCCHHH--------HHHHHHHHHHhc
Confidence            999999999999999986543 456664 3689999999999996 99999999999998        788988898899


Q ss_pred             CCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC---CCeEecCCCceEEEeecCCC-ChHHHHHHHHH
Q 036024          156 NGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL---GIKVYGGINAPYVWAHFPGR-KSWDVFAEILE  230 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~  230 (272)
                      .+++.+.|.++...+.+..+ +|++++++.|+++++.+.+.|.+.   +..+..|.+|+|+|+.++.. +..++...+++
T Consensus       329 ~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~~~~l~~~a~~  408 (459)
T COG1167         329 LGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGIDARELLAAALE  408 (459)
T ss_pred             CCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCCCHHHHHHHHHH
Confidence            99999999999999995444 899999999999999999999987   47788899999999999954 56666666665


Q ss_pred             hcCeEeeC-CCCCCCCC--CCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          231 KTHITTVP-GSGFGPGG--EEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       231 ~~gi~v~~-g~~~~~~~--~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      + |+.+.| |..|...+  .+++|++++. +++++++++++|.+++
T Consensus       409 ~-gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~  453 (459)
T COG1167         409 K-GVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALL  453 (459)
T ss_pred             C-CCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHH
Confidence            5 999999 88887543  6689999855 7889999999887653

>PTZ00377 alanine aminotransferase; Provisional

Probab=100.00  E-value=2e-39  Score=287.65  Aligned_cols=260  Identities=20%  Similarity=0.267  Sum_probs=207.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      |.|++..|++. |...++..| ++++++++++++|.+|++.+           +++|+++++|||||||.+++.+++++|
T Consensus       164 D~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i  243 (481)
T PTZ00377        164 DGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEI  243 (481)
T ss_pred             CEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHH
Confidence            67888887777 888888899 99999999887888885542           178999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEcccCCccccCCC--CCCccc----cCCC---CCceEEEecCccc-cCCCccceeEEEe---cccccc
Q 036024           71 VEFARNNGSIIIFDSAYAAYVTDGC--PRSIYE----IPGA---REVAIEISSFSKF-SGFTGVRLGWTVV---PEELLF  137 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~----~~~~---~~~~i~~~s~sK~-~g~~g~r~G~~~~---~~~~~~  137 (272)
                      +++|++++++||+||+|.++.+++.  ..++..    +...   ..++++++||||. +|+||+|+||+++   ++++  
T Consensus       244 ~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~l--  321 (481)
T PTZ00377        244 IKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEV--  321 (481)
T ss_pred             HHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHH--
Confidence            9999999999999999999888532  234322    2211   1368999999997 5889999999987   6666  


Q ss_pred             cCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc----c-----HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC
Q 036024          138 SSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE----G-----LEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI  207 (272)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~-----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~  207 (272)
                            ++.+..... ...+++.++|.++..++...    .     .+++++.++.++++++.+.+.|+++ |+++..|+
T Consensus       322 ------i~~l~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~  394 (481)
T PTZ00377        322 ------REQIYKLAS-INLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVE  394 (481)
T ss_pred             ------HHHHHHHhh-eecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCC
Confidence                  666766554 33358889999999998631    1     1344555567899999999999988 89999999


Q ss_pred             CceEEEeecC--CC-----------ChHHHHHHHHHhcCeEeeCCCCCCCC-CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          208 NAPYVWAHFP--GR-----------KSWDVFAEILEKTHITTVPGSGFGPG-GEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       208 ~~~~~~i~l~--~~-----------~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +|+|+|++++  ..           .+.+++..+++++||.+.||+.|+.. +.+++|+|+..+++++++++++|++++
T Consensus       395 gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~  473 (481)
T PTZ00377        395 GAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFH  473 (481)
T ss_pred             eeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
Confidence            9999998764  11           23456678888899999999999853 467999999877889999999998763

>PRK06107 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2e-39  Score=282.11  Aligned_cols=258  Identities=23%  Similarity=0.335  Sum_probs=215.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...+...+ ++++++++.+++|.+|++.     .++++++++++|+||||.+++.+++++|+++|++
T Consensus       118 d~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~  197 (402)
T PRK06107        118 DEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLR  197 (402)
T ss_pred             CEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHH
Confidence            56777777554 777777777 8888888766677776443     2578999999999999999999999999999999


Q ss_pred             c-CCEEEEcccCCccccCCC-CCCcccc-CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           77 N-GSIIIFDSAYAAYVTDGC-PRSIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        77 ~-~~~vi~D~~~~~~~~~~~-~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      + ++++|+||+|.++.+++. ..++..+ .+..+++++++||||.||+||+|+||+++++++        ++.+......
T Consensus       198 ~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~--------~~~~~~~~~~  269 (402)
T PRK06107        198 HPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADL--------IAAINKLQSQ  269 (402)
T ss_pred             cCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHH--------HHHHHHHHHh
Confidence            8 999999999998877653 3444444 233578999999999999999999999999888        6777777776


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC------------CC
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG------------RK  220 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~------------~~  220 (272)
                      ...+++.+.|.++..++.. ...++++.++.++++++.+.+.|+++ |+++..+++|+|+|+.++.            .+
T Consensus       270 ~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~  348 (402)
T PRK06107        270 SSSCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLET  348 (402)
T ss_pred             cccCCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeecccccccccccccCCCC
Confidence            6677999999999999974 35788999999999999999999987 8888888999999998742            14


Q ss_pred             hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       221 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +.+++..+++++||.+.||+.|+.  .+++|++++.+++++++++++|++++
T Consensus       349 ~~~~~~~l~~~~gv~v~pg~~Fg~--~~~iRis~~~~~e~l~~~l~~l~~~l  398 (402)
T PRK06107        349 DQDVVLYLLDSAGVAVVQGTAYGL--SPYFRLSIATSLETLEEACARIERAV  398 (402)
T ss_pred             HHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence            467788888888999999999975  57999999889999999999998763

>PRK08361 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-39  Score=281.87  Aligned_cols=259  Identities=29%  Similarity=0.442  Sum_probs=216.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...+...| +++.+|++.++++.+|++.     .++++++++++||||||.+++.+++++|+++|++
T Consensus       118 ~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~  197 (391)
T PRK08361        118 DEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAED  197 (391)
T ss_pred             CEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHH
Confidence            56777776655 778888888 9999999877677777444     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +++++|+||+|.++.+++. ..++...  ..+++++++|+||.+|++|+|+||++++++.        ++.+........
T Consensus       198 ~~~~ii~De~y~~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~--------~~~~~~~~~~~~  267 (391)
T PRK08361        198 YNIYILSDEPYEHFLYEGAKHYPMIKY--APDNTILANSFSKTFAMTGWRLGFVIAPEQV--------IKDMIKLHAYII  267 (391)
T ss_pred             cCeEEEEEcccccceeCCCCCCCHhhc--CCCCEEEEecCchhcCCcHhhhhhhccCHHH--------HHHHHHHHhhhc
Confidence            9999999999999877542 2333333  3467899999999999999999999998877        556655554445


Q ss_pred             CCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC--CChHHHHHHHHHh
Q 036024          156 NGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG--RKSWDVFAEILEK  231 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ll~~  231 (272)
                      .+.+.+.|.++..++.+... +++++.++.++++++.+.+.|+.+ |+.+..+++++|+|+.++.  .+..++...++++
T Consensus       268 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~  347 (391)
T PRK08361        268 GNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDETGMSSEDFAEWLLEK  347 (391)
T ss_pred             cCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCCCCCHHHHHHHHHHh
Confidence            56788899999999986443 678999999999999999999988 8888888889999999973  4677888888887


Q ss_pred             cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.||..|+..+.+++|+++..+++++.+++++|++++
T Consensus       348 ~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l  388 (391)
T PRK08361        348 ARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKAL  388 (391)
T ss_pred             CCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            89999999999876678999999888889999999998764

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=100.00  E-value=3.6e-39  Score=280.61  Aligned_cols=263  Identities=17%  Similarity=0.223  Sum_probs=209.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...++..| ++++++++.++++.+|++.+     +++++++++|||||||.+++.+++++|+++|++
T Consensus       120 d~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~  199 (401)
T TIGR01264       120 QNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAER  199 (401)
T ss_pred             CEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            56777777665 788888899 99999987666677774432     568999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +++++|+||+|.++.+++. ..++..+.. ..++|+++||||+|++||+|+||+++++...  ....+++.+..... ..
T Consensus       200 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~--~~~~~~~~~~~~~~-~~  275 (401)
T TIGR01264       200 QCLPIIADEIYGDMVFSGATFEPLASLSS-TVPILSCGGLAKRWLVPGWRLGWIIIHDRRG--ILRDIRDGLVKLSQ-RI  275 (401)
T ss_pred             CCCEEEEEhhhhhhccCCcccccHHHcCC-CCcEEEEccCcccCCCccceEEEEEecCcch--hHHHHHHHHHHHhh-cc
Confidence            9999999999999887653 344444432 2358999999999999999999999875210  00111333433332 23


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC------CChHHHHHHH
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG------RKSWDVFAEI  228 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~------~~~~~~~~~l  228 (272)
                      .+++.+.|.++..++.+...+++++.++.++++++.+.+.|+.+ |+.+..|++|+|+|+.++.      .++.+++.++
T Consensus       276 ~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l  355 (401)
T TIGR01264       276 LGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERL  355 (401)
T ss_pred             CCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCCCCHHHHHHHH
Confidence            44788999999999975445788999999999999999999998 7777778899999999752      2456778888


Q ss_pred             HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++++||.+.||+.|+.  ++++|++++.+++++++++++|.+++
T Consensus       356 ~~~~gI~v~pg~~f~~--~~~iRis~~~~~~~l~~~l~rl~~~~  397 (401)
T TIGR01264       356 VAEQSVFCLPGSCFEY--PGFFRVVLTVPVVMMEEACSRIQEFC  397 (401)
T ss_pred             HHhCCEEEeCchhcCC--CCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence            8788999999998864  68999999888899999999998764

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK07777 aminotransferase; Validated

Probab=100.00  E-value=3.9e-39  Score=279.24  Aligned_cols=259  Identities=24%  Similarity=0.289  Sum_probs=213.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCC-CCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPG-NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~-~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..|.+. |...++..| ++++++++++ .++.+|+++     .++++++++++||||||.+++.+++++|+++|+
T Consensus       110 d~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~  189 (387)
T PRK07777        110 DEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAV  189 (387)
T ss_pred             CEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHH
Confidence            66777776665 777778888 9999999876 356677544     267899999999999999999999999999999


Q ss_pred             HcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           76 NNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ++++++|+||+|.++.+++. ..++..+.+..+++++++||||.||+||+|+||+++++++        ++.+.......
T Consensus       190 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l--------~~~~~~~~~~~  261 (387)
T PRK07777        190 EHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPL--------IAAVRAAKQYL  261 (387)
T ss_pred             hcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHH--------HHHHHHHHhhc
Confidence            99999999999998887543 3455555544678999999999999999999999999887        56666555544


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC---CChHHHHHHHHHh
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG---RKSWDVFAEILEK  231 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~  231 (272)
                      ....+.+.|.++..++.. ...+.++.++.++++++.+.+.|++.|+++..+++++|+|+.++.   .++.+++..|+++
T Consensus       262 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~  340 (387)
T PRK07777        262 TYVGGAPFQPAVAHALDH-EDAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSAGTYFLCADPRPLGYDDGTEFCRALPER  340 (387)
T ss_pred             ccCCCCHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCCcceEEEecccccCCCCHHHHHHHHHHh
Confidence            445677788888888864 357788999999999999999999999998888889999999752   3567888888888


Q ss_pred             cCeEeeCCCCCCC---CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          232 THITTVPGSGFGP---GGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       232 ~gi~v~~g~~~~~---~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      +||.+.||+.|+.   .+.+++|++++.+++++++++++|+++
T Consensus       341 ~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~  383 (387)
T PRK07777        341 VGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRAL  383 (387)
T ss_pred             CCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence            8999999998863   235789999988899999999999875

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=100.00  E-value=3.7e-39  Score=281.20  Aligned_cols=262  Identities=18%  Similarity=0.308  Sum_probs=210.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...++..| +++++|++++.++.+|++.     .+++++++++|||||||.+++.+++++|+++|++
T Consensus       129 d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~  208 (412)
T PTZ00433        129 DNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEE  208 (412)
T ss_pred             CEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHH
Confidence            66778777666 888889999 9999999876677777443     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +|++||+||+|.++.+++.. .++..+.. ..++++++||||.+|+||+|+||++++ ++...   +.+++.+..... .
T Consensus       209 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~---~~~~~~~~~~~~-~  283 (412)
T PTZ00433        209 LRLPLISDEIYAGMVFNGATFTSVADFDT-TVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNG---GDFLDGMKRLGM-L  283 (412)
T ss_pred             cCCeEEEeccccccccCCCCccchhhccC-CCceEEEccchhhcCCCCeeEEEEEEeCCcccH---HHHHHHHHHHhh-c
Confidence            99999999999998876532 34445432 235799999999999999999999972 21100   011444444333 2


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC------CChHHHHHH
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG------RKSWDVFAE  227 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~------~~~~~~~~~  227 (272)
                      ..+++.+.|.++.+++.+....++++.++.++++++.+.+.|+.+ |+.+..|++|+|+|+.++.      .+..+++..
T Consensus       284 ~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~  363 (412)
T PTZ00433        284 VCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEK  363 (412)
T ss_pred             cCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHH
Confidence            345888999999999875445788999999999999999999986 7888888899999999863      145788888


Q ss_pred             HHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +++++||.+.||+.|+.  .+++|+++...++++.+++++|.+++
T Consensus       364 ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~l~~al~~l~~~~  406 (412)
T PTZ00433        364 LLEEENVQVLPGEIFHM--PGFTRLTISRPVEVLREAVERIKAFC  406 (412)
T ss_pred             HHHhcCEEEeCccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            88777999999999964  57999999888889999999998763

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=100.00  E-value=3.5e-39  Score=288.25  Aligned_cols=262  Identities=23%  Similarity=0.330  Sum_probs=207.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...+...| ++++++++++++|.+|++.     .+++|+++++|||||||.+++.+++++|+++|++
T Consensus       233 d~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~  312 (517)
T PRK13355        233 DEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIARE  312 (517)
T ss_pred             CEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHH
Confidence            67888888777 778888888 9999999888789888554     2689999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEec--ccccccCCcchHHHHHhhhhh
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP--EELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~--~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      |+++||+||+|.++.+++. ..++..+.. ...+++++||||.|+++|+|+||++++  ++...    .+++.+... ..
T Consensus       313 ~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~-~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~----~~~~~l~~~-~~  386 (517)
T PRK13355        313 HQLIIFSDEIYDRLVMDGLEHTSIASLAP-DLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAK----DYIEGLNML-AN  386 (517)
T ss_pred             cCcEEEEehhhhhhcCCCCCcccHHHhCC-CCeEEEEecchhhccCcccceEEEEeeCchhhHH----HHHHHHHHH-hc
Confidence            9999999999999988753 445555521 234678899999999999999999965  33210    012333322 22


Q ss_pred             ccCCcchHHHHHHHHhccccc--HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC-----CChHHHH
Q 036024          154 CFNGASNIAQAGGLACLSSEG--LEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG-----RKSWDVF  225 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~-----~~~~~~~  225 (272)
                      .....+.++|.++..++....  .+++++. +++.++++.+.+.|+++ |+++..|++++|+|++++.     .++.+++
T Consensus       387 ~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~~L~~~~g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~  465 (517)
T PRK13355        387 MRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYNALNAIPGISAVKPKAAFYIFPKIDVKKFNIHDDEQFA  465 (517)
T ss_pred             CcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhcCCCcccCCCCeeeEEEeecCcccCCCCCHHHHH
Confidence            333478899999999986432  2455554 34456679999999988 8999999999999999863     2456778


Q ss_pred             HHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          226 AEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .++++++||.+.||+.|+..+++++|+++..+++++++++++|++++
T Consensus       466 ~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a~~rl~~~~  512 (517)
T PRK13355        466 LDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDAMDRLADFF  512 (517)
T ss_pred             HHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHHHHHHHHHH
Confidence            88888889999999999866789999999888999999999998764

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=4e-39  Score=273.44  Aligned_cols=248  Identities=20%  Similarity=0.279  Sum_probs=191.7

Q ss_pred             ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024            5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII   82 (272)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi   82 (272)
                      .+++..|++. |...++..| +++++|++.. +..++.-+..++|+++++|||||||.+++.+++++|+++|++++++||
T Consensus        81 ~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~~-~~~~~~l~~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI  159 (332)
T PRK06425         81 NIIIVEPNFNEYKGYAFTHGIRISALPFNLI-NNNPEILNNYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLF  159 (332)
T ss_pred             cEEEeCCChHHHHHHHHHcCCeEEEEeCCcc-cCcHHHHhhcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEE
Confidence            3555555554 889999999 9999999753 332332112588999999999999999999999999999999999999


Q ss_pred             EcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHH
Q 036024           83 FDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA  162 (272)
Q Consensus        83 ~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (272)
                      +||+|.++.+++ ..+...+....+++++++||||++|+||+|+||+++++++        ++.+......  ...+.++
T Consensus       160 ~DE~Y~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~l--------i~~l~~~~~~--~~~~~~~  228 (332)
T PRK06425        160 IDEAFIDFVPNR-AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYN--------MKISRKITEP--WSVCDPA  228 (332)
T ss_pred             Eecchhcccccc-chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHH--------HHHHHHcCCC--CccCHHH
Confidence            999999987654 2234444334478999999999999999999999999887        5556543322  2233333


Q ss_pred             HHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024          163 QAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG  241 (272)
Q Consensus       163 ~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~  241 (272)
                      +.    ++.... ..+.++.++.++++++.+.+.|+++|+.+..+.+|+|+|+.++  +..++...++++ ||.+.||+.
T Consensus       229 ~~----~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~f~~~~~~--~~~~~~~~l~~~-gi~v~~~~~  301 (332)
T PRK06425        229 ID----FIRSIDLDYVAKHSLDIMENERSYLINNLEAMGFRAAGDPSANFITFMIP--DAHDFYSYLLKN-GILVRLLDD  301 (332)
T ss_pred             HH----HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCceEEEEEcC--CHHHHHHHHHHC-CeEEEECCC
Confidence            22    232222 3556788999999999999999999988875557899999987  566777777765 999999999


Q ss_pred             CCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          242 FGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       242 ~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      |+..+++++|+++. ++++.++++++|++++
T Consensus       302 f~~~~~~~iRis~~-~~~~~~~l~~al~~~~  331 (332)
T PRK06425        302 YECLGEQYIRIAIR-RRSFNIKLVNALRNFL  331 (332)
T ss_pred             CCCCCCCEEEEEeC-CHHHHHHHHHHHHHHh
Confidence            97555789999985 6778999999998764

>PLN02656 tyrosine transaminase

Probab=100.00  E-value=7.2e-39  Score=279.00  Aligned_cols=264  Identities=17%  Similarity=0.247  Sum_probs=208.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |.......| +++.+|++++.++.+|++.+     ++++++++++||||||.+++.+++++|+++|++
T Consensus       121 d~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~  200 (409)
T PLN02656        121 ANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETAEK  200 (409)
T ss_pred             CeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Confidence            67888877776 666667778 99999997666777775542     578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEeccc-ccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE-LLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +++++|+||+|.++.+++.. .++..+. ..+++|+++||||.|++||+|+||+++++. ... .-+.+++.+...... 
T Consensus       201 ~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~-~~~~~~~~~~~~~~~-  277 (409)
T PLN02656        201 LKILVIADEVYGHLAFGSNPFVPMGVFG-SIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSF-RDPKIVERIKKYFDI-  277 (409)
T ss_pred             cCCEEEEehhhhhcccCCCCcccHHHhc-ccCcEEEEcccchhccCcceeEEEEEEeCccccc-ccHHHHHHHHHHHhh-
Confidence            99999999999999887642 3444442 346799999999999999999999998531 000 000125555554443 


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecCCCceEEEeecCC-----C-ChHHHHH
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGGINAPYVWAHFPG-----R-KSWDVFA  226 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~i~l~~-----~-~~~~~~~  226 (272)
                      ..+++.+.|.++.+++.+....++++.++.++++++.+.+.|+.+ ++. +..|++|+|+|++++.     . ++.+++.
T Consensus       278 ~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~  357 (409)
T PLN02656        278 LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCF  357 (409)
T ss_pred             hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHH
Confidence            234788999999999975445788999999999999999999987 343 3467889999999862     1 3446677


Q ss_pred             HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++++++||.+.||+.|+.  ++++|++++.+++++++++++|++++
T Consensus       358 ~~l~~~gV~v~pg~~fg~--~~~iRi~~~~~~e~l~eal~rl~~~~  401 (409)
T PLN02656        358 KLAREESVIILPGTAVGL--KNWLRITFAADPSSLEEALGRIKSFY  401 (409)
T ss_pred             HHHHhCCEEEecchhcCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence            788888999999999964  68999999888999999999998763

>PLN02231 alanine transaminase

Probab=100.00  E-value=4.8e-39  Score=285.92  Aligned_cols=259  Identities=19%  Similarity=0.245  Sum_probs=206.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      |.|++..|++. |...++..| ++++++++++++|.+|++.+           .++|+++++|||||||.+++.+++++|
T Consensus       217 d~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~I  296 (534)
T PLN02231        217 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDI  296 (534)
T ss_pred             CEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHH
Confidence            67888888777 888888889 99999999877898885542           168999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEcccCCccccCC--CCCCccccC---CC---CCceEEEecCcccc-CCCccceeEEEec---cccccc
Q 036024           71 VEFARNNGSIIIFDSAYAAYVTDG--CPRSIYEIP---GA---REVAIEISSFSKFS-GFTGVRLGWTVVP---EELLFS  138 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~~~~~~--~~~~~~~~~---~~---~~~~i~~~s~sK~~-g~~g~r~G~~~~~---~~~~~~  138 (272)
                      +++|++++++||+||+|.++.+++  ...++..+.   +.   ..++++++|+||.+ |.||+|+||++++   +++   
T Consensus       297 v~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l---  373 (534)
T PLN02231        297 VEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDV---  373 (534)
T ss_pred             HHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHH---
Confidence            999999999999999999998853  233544432   11   23689999999976 7899999999873   445   


Q ss_pred             CCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc-----cH----HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC
Q 036024          139 SGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE-----GL----EAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN  208 (272)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~----~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~  208 (272)
                           ++.+.+.... ...++...|.++..++..+     .+    ++.+++++.++++++.+.+.|+++ |+.+..|++
T Consensus       374 -----~~~l~k~~~~-~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~G  447 (534)
T PLN02231        374 -----REQIYKVASV-NLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEG  447 (534)
T ss_pred             -----HHHHHHHHhh-hcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCe
Confidence                 5566555443 3346778888888888632     22    234566889999999999999998 999999999


Q ss_pred             ceEEEeec--CCC-----------ChHHHHHHHHHhcCeEeeCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          209 APYVWAHF--PGR-----------KSWDVFAEILEKTHITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       209 ~~~~~i~l--~~~-----------~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      ++|+|+++  +..           .+..++.++++++||.+.||+.|+. .+..++|+++..+++++++++++|+++
T Consensus       448 gfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~~  524 (534)
T PLN02231        448 AMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIVSRLTEF  524 (534)
T ss_pred             eeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            99999555  321           2334567789899999999999985 345689999988899999999999875

>PRK05764 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.1e-38  Score=273.49  Aligned_cols=258  Identities=26%  Similarity=0.414  Sum_probs=215.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...++..| ++++++.++++++.+|++.     .++++++++++||||||.+++.+++++|+++|++
T Consensus       116 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~  195 (393)
T PRK05764        116 DEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVE  195 (393)
T ss_pred             CEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHH
Confidence            56677766655 777888889 9999999877678777443     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCcccc-CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +++++|+||+|.++.+++. ..++..+ .+..+++++++|+||.+|++|+|+||+++++++        .+.+.......
T Consensus       196 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~--------~~~~~~~~~~~  267 (393)
T PRK05764        196 HDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKEL--------IKAMSKLQSHS  267 (393)
T ss_pred             CCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHH--------HHHHHHHHhhc
Confidence            9999999999998887543 2344444 234568899999999999999999999988877        66676666656


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC------ChHHHHHH
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR------KSWDVFAE  227 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~------~~~~~~~~  227 (272)
                      ..+++.+.|.++.+++.. ..+++++.++.++++++.+++.|+++ |+.+..+++++++|+.++..      ++.++...
T Consensus       268 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  346 (393)
T PRK05764        268 TSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEA  346 (393)
T ss_pred             ccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccccccCCHHHHHHH
Confidence            666889999999998873 45778889999999999999999998 99988888889999999742      13677788


Q ss_pred             HHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +++++||.+.||+.|+.  .+++|+++..+++++++++++|.+++
T Consensus       347 l~~~~gi~v~~g~~f~~--~~~vRis~~~~~~~~~~~i~~l~~~~  389 (393)
T PRK05764        347 LLEEAGVAVVPGIAFGA--PGYVRLSYATSLEDLEEGLERIERFL  389 (393)
T ss_pred             HHHhCCEEEccccccCC--CCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            88888999999998865  68999999889999999999998763

>PRK08363 alanine aminotransferase; Validated

Probab=100.00  E-value=3.2e-38  Score=274.39  Aligned_cols=258  Identities=23%  Similarity=0.302  Sum_probs=207.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEe-ecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYL-ECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~-~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..|++. |...++..| +++.+ +.++ .++.+|++.     .+++++++++|||||||.+++.+++++|+++|+
T Consensus       118 d~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~  196 (398)
T PRK08363        118 DEILIPGPSYPPYTGLVKFYGGVPVEYRTIEE-EGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAG  196 (398)
T ss_pred             CEEEEcCCCCcchHHHHHHcCCEEEEeccccc-cCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHH
Confidence            66777777766 777778888 88888 4443 477777443     257899999999999999999999999999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEe--cccccccCCcchHHHHHhhhh-
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV--PEELLFSSGFPVINDFNRIIC-  152 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~~~~~~~~~~~~~~~~~~~~~-  152 (272)
                      ++++++|+||+|.++.+++...++..+.. ..++++++||||.|++||+|+||+++  ++++        ++.+..... 
T Consensus       197 ~~~~~li~Deay~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~--------~~~l~~~~~~  267 (398)
T PRK08363        197 EHDLPVISDEIYDLMTYEGKHVSPGSLTK-DVPVIVMNGLSKVYFATGWRLGYIYFVDPEGK--------LAEVREAIDK  267 (398)
T ss_pred             HcCeEEEEhhhhhhhccCCcccCHHHcCc-CCcEEEEecchhccCCccceEEEEEEeCcHHH--------HHHHHHHHHH
Confidence            99999999999998887765455555542 45799999999999999999999997  5544        333332221 


Q ss_pred             --hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC---CChHHHHH
Q 036024          153 --TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG---RKSWDVFA  226 (272)
Q Consensus       153 --~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~---~~~~~~~~  226 (272)
                        ....+.+.++|.++.+++.. ..+++++.+++++++++.+.+.|.++ ++.+..+++++++|+.++.   .++.+++.
T Consensus       268 ~~~~~~~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~~~~  346 (398)
T PRK08363        268 LARIRLCPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPWKDDKEFVL  346 (398)
T ss_pred             HhcccccCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCCCCHHHHHH
Confidence              12235788999999988874 45788999999999999999999988 8888888889999998874   24567777


Q ss_pred             HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++++++||.+.||+.|+..+++++|++++.+++++.+++++|++++
T Consensus       347 ~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~  392 (398)
T PRK08363        347 DVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFM  392 (398)
T ss_pred             HHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            8778889999999999866678999999888899999999998753

>PRK07550 hypothetical protein; Provisional

Probab=100.00  E-value=4.3e-38  Score=272.62  Aligned_cols=258  Identities=26%  Similarity=0.362  Sum_probs=212.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| ++++++++++.++.+|++.     .++++++++++||||||.+++.+++++|+++|++
T Consensus       115 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~  194 (386)
T PRK07550        115 DEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARR  194 (386)
T ss_pred             CEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHH
Confidence            67777776655 777888899 9999999876688777443     2578899999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +++++|+||+|.++.++.. +.++....+..+++++++||||.+|++|+|+||++++++.        ++.+........
T Consensus       195 ~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~--------~~~~~~~~~~~~  266 (386)
T PRK07550        195 HGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPAR--------IAEIEKFMDTVA  266 (386)
T ss_pred             cCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHH--------HHHHHHHHhhcc
Confidence            9999999999998865432 2233332233567899999999999999999999998877        666766666666


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC--CCChHHHHHHHHHhc
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKT  232 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~  232 (272)
                      .+++.++|.++..++.. ..++.++.++.++++++.+.+.|... ++.+. +.+++|+|+.++  +.+..++..++++++
T Consensus       267 ~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~l~~~l~~~~  344 (386)
T PRK07550        267 ICAPRIGQIAVAWGLPN-LADWRAGNRAEIARRRDAFRAVFARLPGWELL-ASGAYFAYVRHPFPDRPSREVARRLAKEA  344 (386)
T ss_pred             cCCCcHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-CCceEEEEecCCCCCCCHHHHHHHHHHhc
Confidence            66888999999998874 44778888999999999999999986 76654 458899999997  356778888888888


Q ss_pred             CeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHh
Q 036024          233 HITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEAL  271 (272)
Q Consensus       233 gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~  271 (272)
                      ||.+.||..|+..+.+++|++++. +++++++++++|+++
T Consensus       345 gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~  384 (386)
T PRK07550        345 GILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF  384 (386)
T ss_pred             CEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence            999999999976667899999964 788999999999875

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=100.00  E-value=8.3e-38  Score=272.05  Aligned_cols=262  Identities=19%  Similarity=0.304  Sum_probs=209.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...+...| +++++++++++++.+|++.     .++++++++++||||||.+++.+++++|+++|++
T Consensus       121 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~  200 (403)
T TIGR01265       121 ANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARK  200 (403)
T ss_pred             CEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHH
Confidence            66777777655 777778888 9999998766667777443     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecc--cccccCCcchHHHHHhhhhh
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE--ELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~--~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +|+++|+||+|.++.+++. ..++..+.. ..++++++||||.|++||+|+||+++++  ..+..   ++.+.+..... 
T Consensus       201 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~---~~~~~~~~~~~-  275 (403)
T TIGR01265       201 LGIPIIADEIYGHMVFGDAPFIPMASFAS-IVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRD---TVLQGLKNLLQ-  275 (403)
T ss_pred             CCCEEEEEccccccccCCCCccchhhhcc-CCcEEEEeecccccCCCcceEEEEEEeCchhhhHH---HHHHHHHHHhh-
Confidence            9999999999999887753 245555532 3468999999999999999999999853  33110   01222322222 


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC------ChHHHHH
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR------KSWDVFA  226 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~------~~~~~~~  226 (272)
                      ....++.+.|.++..++.+....++++.+++++++++.+.+.|+.+ |+.+..|++|+|+|++++..      ++.+++.
T Consensus       276 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~  355 (403)
T TIGR01265       276 RILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFPEIKDDVDFCE  355 (403)
T ss_pred             hhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccccCCCCCHHHHHH
Confidence            2334788999999999976556788999999999999999999987 78877788999999999732      5677888


Q ss_pred             HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+++++||.+.||+.|+.  .+++|++++.+++++++++++|++++
T Consensus       356 ~l~~~~gv~v~pg~~f~~--~~~iRis~~~~~~~l~~~l~~l~~~~  399 (403)
T TIGR01265       356 KLVREESVICLPGSAFGL--PNWVRITITVPESMLEEACSRIKEFC  399 (403)
T ss_pred             HHHHhCCEEEeCccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            888888999999999964  68999999888889999999998763

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=1.4e-37  Score=266.19  Aligned_cols=253  Identities=23%  Similarity=0.406  Sum_probs=202.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC---CCC-CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD---LKG-TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d---l~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..|.+. |...++..| ++++++++.+++|.+|   ++. ..+++++++++||||||.+++.+++++|+++|+++
T Consensus        94 ~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~  173 (354)
T PRK06358         94 KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANEIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKR  173 (354)
T ss_pred             CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccHHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhc
Confidence            56677766666 888888889 9999999877677776   222 25689999999999999999999999999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG  157 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (272)
                      ++++|+||+|.++.+++.+.+........+++++++||||.+|+||+|+||++++++.+       .+.+.....  ..+
T Consensus       174 ~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~-------~~~~~~~~~--~~~  244 (354)
T PRK06358        174 NIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNL-------AEKLLQMRE--PWS  244 (354)
T ss_pred             CCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHH-------HHHHHHhCC--CCc
Confidence            99999999999988776444433333345789999999999999999999999865431       455554443  345


Q ss_pred             cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024          158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT  236 (272)
Q Consensus       158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v  236 (272)
                      .+.++|.++..++.+  ..++++.++.++++++.+.+.|+++ |+.+..+ +|.|+|+.++.  ..++...++++ ||.+
T Consensus       245 ~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~~~~~~--~~~~~~~l~~~-gI~v  318 (354)
T PRK06358        245 INTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP-SVNFIFFKLEK--PIDLRKELLKK-GILI  318 (354)
T ss_pred             chHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-cceEEEEEcCc--hHHHHHHHHHC-CeEE
Confidence            788899999888863  3566888899999999999999987 7787776 56799999974  36777777764 9999


Q ss_pred             eCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       237 ~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .||+.|+..+++++|+++ .++++.+++++.|++++
T Consensus       319 ~~~~~f~~~~~~~iRls~-~~~~~~~~l~~~l~~~~  353 (354)
T PRK06358        319 RSCSNYRGLDENYYRVAV-KSREDNKKLLKALEVIL  353 (354)
T ss_pred             EECCCCCCCCCCEEEEEe-CCHHHHHHHHHHHHHHh
Confidence            999999654578999997 57778888888887753

>PRK07568 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-37  Score=270.40  Aligned_cols=259  Identities=25%  Similarity=0.318  Sum_probs=209.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCccc-CCC---C--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFP-DLK---G--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~-dl~---~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..|++. |...++..| ++++++++.+.++.. |++   .  .++++++++++||||||.+++.+++++|+++|+
T Consensus       113 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~  192 (397)
T PRK07568        113 DEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAK  192 (397)
T ss_pred             CEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHH
Confidence            56777777665 777778889 999999976556653 322   2  267899999999999999999999999999999


Q ss_pred             HcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhhh
Q 036024           76 NNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~  153 (272)
                      ++++++|+||+|.++.+++. ..++..+.+..+++++++|+||.+|++|+|+||+++++ ++        ++.+......
T Consensus       193 ~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~--------~~~~~~~~~~  264 (397)
T PRK07568        193 KHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKEL--------IAAAMKLCQA  264 (397)
T ss_pred             HCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHH--------HHHHHHHhhc
Confidence            99999999999999887653 34555555446789999999999998999999999864 44        4444443332


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHh-
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEK-  231 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~-  231 (272)
                       ..+++.+.|.++..++.. ...++++.++.++++++.+.+.|+++ |+.+..|++++|+|++++..+..++...++++ 
T Consensus       265 -~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~~l~~~~  342 (397)
T PRK07568        265 -RLSPPTLEQIGAAALLDT-PESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPVDDAEDFAKWLLTDF  342 (397)
T ss_pred             -cCCCCcHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCCCCHHHHHHHHHhhc
Confidence             345788899999998874 45788999999999999999999987 78888888899999999865667777777764 


Q ss_pred             ----cCeEeeCCCCCCC--C-CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 ----THITTVPGSGFGP--G-GEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ----~gi~v~~g~~~~~--~-~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                          +||.+.||..|+.  . +++++|++++.+++++++++++|++++
T Consensus       343 ~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l~~~l  390 (397)
T PRK07568        343 NYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILKEAL  390 (397)
T ss_pred             ccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence                5999999998852  2 357999999878899999999998764

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=100.00  E-value=2.3e-37  Score=266.06  Aligned_cols=247  Identities=26%  Similarity=0.346  Sum_probs=199.6

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII   81 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v   81 (272)
                      |.|++..|.+. |...++..| +++.++..      .+++. ++++++++++||||||.+++.+++++|+++|+++++++
T Consensus       112 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~------~~l~~-~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~i  184 (364)
T PRK07865        112 DVVVIPELAYPTYEVGARLAGATVVRADSL------TELGP-QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVV  184 (364)
T ss_pred             CEEEECCCCcccHHHHHHhcCCEEEecCCh------hhCCc-ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence            66777776666 777778888 88877521      12322 67899999999999999999999999999999999999


Q ss_pred             EEcccCCccccCCCCCCcccc---CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc
Q 036024           82 IFDSAYAAYVTDGCPRSIYEI---PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA  158 (272)
Q Consensus        82 i~D~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (272)
                      |+||+|.++.+++...+....   ....+++++++||||.+|+||+|+||+++++++        ++.+.........+.
T Consensus       185 i~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~--------~~~~~~~~~~~~~~~  256 (364)
T PRK07865        185 ASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPAL--------VAELLEVRKHAGMMV  256 (364)
T ss_pred             EEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHH--------HHHHHHHHHhcCCCc
Confidence            999999988876533222211   123468999999999999999999999998887        667776665555568


Q ss_pred             chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeC
Q 036024          159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVP  238 (272)
Q Consensus       159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~  238 (272)
                      +.+.|.++.+++.+  .++.++.++.++++++.+.+.|++.|+.+..+++++|+|+.++. +..++... ++++||.+.|
T Consensus       257 ~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~-l~~~gv~v~p  332 (364)
T PRK07865        257 PAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAAGFRVDHSEAGLYLWATRGE-DCWDTVAW-LAERGILVAP  332 (364)
T ss_pred             CHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCccEEEEEeCCC-CHHHHHHH-HHHCCEEEeC
Confidence            88999999888874  45678889999999999999999999888888889999999853 34455544 4566999999


Q ss_pred             CCCCCCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024          239 GSGFGPGGEEYIRISGFGHRESILEASRRLE  269 (272)
Q Consensus       239 g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~  269 (272)
                      |..|++.+++++|++++.+++++++++++|+
T Consensus       333 g~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~  363 (364)
T PRK07865        333 GDFYGPAGAQHVRVALTATDERIAAAVERLA  363 (364)
T ss_pred             ccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence            9988766678999999878999999999985

>PRK09275 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.7e-38  Score=277.86  Aligned_cols=262  Identities=22%  Similarity=0.274  Sum_probs=201.1

Q ss_pred             cccccccCccc-chHHhccc--c-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKY--C-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~--g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..|++. |...+...  | ++++++.+++++|.+|++.     .+++|+++++|||||||.+++.+++++|+++|
T Consensus       191 D~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia  270 (527)
T PRK09275        191 DKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIV  270 (527)
T ss_pred             CEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHH
Confidence            77888888877 77665544  4 6677777777789888543     27899999999999999999999999999999


Q ss_pred             HH--cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccc-cC---C--------
Q 036024           75 RN--NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF-SS---G--------  140 (272)
Q Consensus        75 ~~--~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~-~~---~--------  140 (272)
                      ++  ++++||+||+|.++.+.  ..++...  .++++|+++||||.||++|||+||++++++.+. ..   +        
T Consensus       271 ~~~~~~l~II~DEvY~~f~~~--~~s~~~~--~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~  346 (527)
T PRK09275        271 NEKRPDLMIITDDVYGTFVDD--FRSLFAV--LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKEL  346 (527)
T ss_pred             HhcCCCcEEEECCCChhhccc--ccCHHHh--CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHH
Confidence            64  59999999999988752  3344433  457899999999999999999999999886211 00   0        


Q ss_pred             -----------------cchHHHHHhhhhhccCCcchHHHHH-----HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh
Q 036024          141 -----------------FPVINDFNRIICTCFNGASNIAQAG-----GLACLSSEGLEAVHSVVDYYKENTKILIDTLAS  198 (272)
Q Consensus       141 -----------------~~~~~~~~~~~~~~~~~~~~~~~~a-----~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~  198 (272)
                                       .++.+........+..+.+.+.|.+     +.+++. ....+.+++++.++++++.+.+.|. 
T Consensus       347 ~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~-~~~~~~~~~~~~~~~Rr~~l~~~Lg-  424 (527)
T PRK09275        347 DKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLD-EEDAYKKAMKDIIRRRYKALYEGLG-  424 (527)
T ss_pred             HhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHcC-
Confidence                             0111222455555666788888886     223344 3456788999999999999988883 


Q ss_pred             CCCeEecCCCceEEEeecCC-----------------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHH
Q 036024          199 LGIKVYGGINAPYVWAHFPG-----------------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRES  260 (272)
Q Consensus       199 ~g~~~~~~~~~~~~~i~l~~-----------------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~  260 (272)
                      .++....+++++|+|++++.                 .++.+++.+|++++||.+.||+.|+. +++++|+|+++ ++++
T Consensus       425 ~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~-~~~~vRis~a~~~~~~  503 (527)
T PRK09275        425 LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGG-PEWSVRVSLANLNEED  503 (527)
T ss_pred             CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCC-CCCeEEEEEecCCHHH
Confidence            24444567899999999852                 24678899999999999999999986 36789999975 7889


Q ss_pred             HHHHHHHHHHhC
Q 036024          261 ILEASRRLEALF  272 (272)
Q Consensus       261 i~~~l~~l~~~l  272 (272)
                      +.++.++|++++
T Consensus       504 ~~~~~~rl~~~l  515 (527)
T PRK09275        504 YAKIGKAIRKLL  515 (527)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998763

>PRK09265 aminotransferase AlaT; Validated

Probab=100.00  E-value=1.8e-37  Score=270.06  Aligned_cols=264  Identities=22%  Similarity=0.300  Sum_probs=203.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...++..| +++.++.+.++++.+|++.     .+++++++++|||||||.+++.+++++|+++|++
T Consensus       120 d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~  199 (404)
T PRK09265        120 DEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQ  199 (404)
T ss_pred             CEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence            67788877776 777777788 8999988766677777443     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +|+++|+||+|.++.+++. ..++..+. ...++++++||||.+|+||+|+||++++. ...   .+.+++.+... ...
T Consensus       200 ~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~---~~~~~~~~~~~-~~~  274 (404)
T PRK09265        200 HNLIIFADEIYDKILYDGAVHISIASLA-PDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKH---AKGYIEGLDML-ASM  274 (404)
T ss_pred             CCCEEEEehhhhhccCCCCCcCCHHHcC-CCceEEEEecchhhccCcccceEEEEEeCchHH---HHHHHHHHHHH-hcc
Confidence            9999999999999887653 34444443 23468999999999999999999999742 211   00112333222 223


Q ss_pred             cCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC-----ChHHHHHH
Q 036024          155 FNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR-----KSWDVFAE  227 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~-----~~~~~~~~  227 (272)
                      ..+++.++|.++.+++..... ....+..++++++++.+.+.|+++ |+.+..|++|+|+|+.++..     ++.+.+.+
T Consensus       275 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~  354 (404)
T PRK09265        275 RLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLD  354 (404)
T ss_pred             ccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccccCCCCHHHHHHH
Confidence            345788999999999864322 222233456788899999999887 88888888999999999742     35566777


Q ss_pred             HHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +++++||.+.||+.|+..+++++|+++..+++++++++++|++++
T Consensus       355 ~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l  399 (404)
T PRK09265        355 LLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRFL  399 (404)
T ss_pred             HHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence            888889999999999765678999999878999999999998764

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=100.00  E-value=4e-38  Score=270.93  Aligned_cols=252  Identities=28%  Similarity=0.415  Sum_probs=212.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C------CceEEEEecCCCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S------RTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~------~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      |.|++..|.+. |...++..| +++++|++.+.++..|++.+     +      +++++++++||||||.+++.+++++|
T Consensus        94 ~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l  173 (363)
T PF00155_consen   94 DTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELREL  173 (363)
T ss_dssp             SEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHH
T ss_pred             ccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccch
Confidence            56777777777 888999999 99999988777888885542     2      57899999999999999999999999


Q ss_pred             HHHHHHcCCEEEEcccCCccccCCCCC-C-ccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024           71 VEFARNNGSIIIFDSAYAAYVTDGCPR-S-IYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN  148 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~~~~~~~~~-~-~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~  148 (272)
                      +++|+++++++|+||+|.++.++.... + ...+. ...++++++|+||.||++|+|+||+++++++        ++.+.
T Consensus       174 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~--------~~~l~  244 (363)
T PF00155_consen  174 AELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLD-EDDNVIVVGSLSKSFGLPGLRVGYIVAPPEL--------IERLR  244 (363)
T ss_dssp             HHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHT-TTSTEEEEEESTTTTTSGGGTEEEEEEEHHH--------HHHHH
T ss_pred             hhhhcccccceeeeeceeccccCCCccCccccccc-ccccceeeeeccccccccccccccccchhhh--------hhhhh
Confidence            999999999999999999988885422 2 23332 3345899999999999999999999997777        66777


Q ss_pred             hhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHH
Q 036024          149 RIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFA  226 (272)
Q Consensus       149 ~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~  226 (272)
                      ........  +.+.+.++.+++.+...  +++++.+++++++++.+.+.|++.|+.+.++++++++|+.++..+..+++.
T Consensus       245 ~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  322 (363)
T PF00155_consen  245 RFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPEAGFFLWVRLDPNDAEELAQ  322 (363)
T ss_dssp             HHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHSBSSEEEEEESHHHHHHHHH
T ss_pred             hccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeeccCccEEEEEcccchHHHHHH
Confidence            66655443  78888888888886554  489999999999999999999999999999889999999998546778999


Q ss_pred             HHHHhcCeEeeCCCCCCCCCCCeEEEEc-cCCHHHHHHHHHHH
Q 036024          227 EILEKTHITTVPGSGFGPGGEEYIRISG-FGHRESILEASRRL  268 (272)
Q Consensus       227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~~~~~~i~~~l~~l  268 (272)
                      +|++++||.+.||..|+.  ++++|+++ ..+++++++++++|
T Consensus       323 ~L~~~~gi~v~pg~~~~~--~~~iRi~~a~~~~e~~~~~~~~l  363 (363)
T PF00155_consen  323 ELLEEYGILVRPGSYFGV--PGYIRISLASHSEEDLEEALERL  363 (363)
T ss_dssp             HHHHHHTEEEEEGGGGTS--TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred             HHHHhCCEEEEecCCCCC--CCEEEEEeccCCHHHHHHHHhhC
Confidence            999988999999999887  78999999 66999999999986

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=100.00  E-value=1.5e-37  Score=272.90  Aligned_cols=262  Identities=22%  Similarity=0.286  Sum_probs=198.0

Q ss_pred             cccccccCccc-chHHhcc--cc-eeEEeecCCCCC-----cccCCCC-----CCCceEEEEecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGK--YC-NIEYLECGPGNN-----FFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~--~g-~~~~~~~~~~~~-----~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..|++. |...+..  +| ++++++.+++++     |.+|++.     .+++|+++++|||||||.+++.+++++
T Consensus       185 D~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~  264 (521)
T TIGR03801       185 DKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEK  264 (521)
T ss_pred             CEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHH
Confidence            67888877776 7766444  46 888888875433     8887443     268999999999999999999999999


Q ss_pred             HHHHHHHc--CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccc-cCC------
Q 036024           70 LVEFARNN--GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF-SSG------  140 (272)
Q Consensus        70 l~~~~~~~--~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~-~~~------  140 (272)
                      |+++|+++  +++||+||+|.++.+.  ..++...  .++++++++||||.||++|||+||++++++.+. +..      
T Consensus       265 I~~ia~~~~~~l~II~DEvY~~f~~~--~~sl~~~--~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~  340 (521)
T TIGR03801       265 IVDIVANDRPDLMILTDDVYGTFVDD--FRSLFAE--LPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEE  340 (521)
T ss_pred             HHHHHHhcCCCeEEEECCCchhhccc--ccchhhh--CCCCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHH
Confidence            99999986  9999999999988752  3444443  457899999999999999999999999876321 000      


Q ss_pred             ----------------------cchHHHHHhhhhhccCCcchHHHH-----HHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024          141 ----------------------FPVINDFNRIICTCFNGASNIAQA-----GGLACLSSEGLEAVHSVVDYYKENTKILI  193 (272)
Q Consensus       141 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~-----a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  193 (272)
                                            .++.+..+.....+..+.+.+.|.     ++.+++. ....+.+++++.++++++.+.
T Consensus       341 ~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~-~~~~y~~~~~~~~~~R~~~l~  419 (521)
T TIGR03801       341 KKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMD-KENAYKAETKDICRRREKLLF  419 (521)
T ss_pred             HHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHH
Confidence                                  011112233334445556777665     3444444 345688999999999999999


Q ss_pred             HHHHhCCCeEecCCCceEEEeecCCC-----------------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC
Q 036024          194 DTLASLGIKVYGGINAPYVWAHFPGR-----------------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG  256 (272)
Q Consensus       194 ~~L~~~g~~~~~~~~~~~~~i~l~~~-----------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~  256 (272)
                      +.| ...+...++++++|+|++++..                 ++.+++.+|++++||.+.||..|+.. .+++|+|+++
T Consensus       420 ~~L-g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~-~~~vRisla~  497 (521)
T TIGR03801       420 RGL-GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGP-EWSVRVSLAN  497 (521)
T ss_pred             Hhc-CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCC-CCeEEEEecC
Confidence            988 2233345577899999999731                 46789999999999999999999864 6789999975


Q ss_pred             -CHHHHHHHHHHHHHhC
Q 036024          257 -HRESILEASRRLEALF  272 (272)
Q Consensus       257 -~~~~i~~~l~~l~~~l  272 (272)
                       +++++.++.++|++++
T Consensus       498 l~~~~~~~~~~rl~~~~  514 (521)
T TIGR03801       498 LNEYDYAEIGRAIRKIL  514 (521)
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence             8888999999998763

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=100.00  E-value=8.5e-37  Score=261.75  Aligned_cols=247  Identities=24%  Similarity=0.325  Sum_probs=197.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII   81 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v   81 (272)
                      |.|++..|.+. |...+...| +++.++.  ...    ++. ++++++++++|+||||.+++.+++++|+++|+++|+++
T Consensus       106 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~----l~~-~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~i  178 (357)
T TIGR03539       106 DTVVIPELAYPTYEVGALLAGATPVAADD--PTE----LDP-VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVV  178 (357)
T ss_pred             CEEEECCCCcHHHHHHHHhcCCEEeccCC--hhh----cCc-cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEE
Confidence            66777776665 777777788 8777641  111    221 57899999999999999999999999999999999999


Q ss_pred             EEcccCCccccCCCCCCcccc---CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc
Q 036024           82 IFDSAYAAYVTDGCPRSIYEI---PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA  158 (272)
Q Consensus        82 i~D~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (272)
                      |+||+|.++.+++.+.+....   ++..+++++++||||.+|++|+|+||+++++++        ++.+.........++
T Consensus       179 i~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~--------~~~~~~~~~~~~~~~  250 (357)
T TIGR03539       179 ASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPAL--------VAELLTVRKHAGLMV  250 (357)
T ss_pred             EEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHH--------HHHHHHHHhhcccCC
Confidence            999999988776533222211   223468999999999999999999999988877        566666665555668


Q ss_pred             chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeC
Q 036024          159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVP  238 (272)
Q Consensus       159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~  238 (272)
                      +.+.|.++.+++.+  ..+.++.++.++++++.+.+.|.+.|+.+..+++++|+|+.++. +..++...| +++||.+.|
T Consensus       251 ~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~~~~~~~~~~~~-~~~~~~~~l-~~~gV~v~p  326 (357)
T TIGR03539       251 PAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKAGFRIDHSEAGLYLWATRGE-DAWDTVDRL-AELGILVAP  326 (357)
T ss_pred             CHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCccEEEEEECCC-CHHHHHHHH-HhCCEEECC
Confidence            88999999888864  45668889999999999999999989888888899999999864 444555554 566999999


Q ss_pred             CCCCCCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024          239 GSGFGPGGEEYIRISGFGHRESILEASRRLE  269 (272)
Q Consensus       239 g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~  269 (272)
                      |..|+..+.+++|++++.+++++++++++|.
T Consensus       327 g~~f~~~~~~~iRis~~~~~~~i~~~~~~l~  357 (357)
T TIGR03539       327 GDFYGPAGSQHVRVALTATDERIAAAVARLT  357 (357)
T ss_pred             ccccCCCCCCeEEEEecCCHHHHHHHHHhhC
Confidence            9988766678999999888999999998873

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PLN02397 aspartate transaminase

Probab=100.00  E-value=4.6e-37  Score=268.24  Aligned_cols=251  Identities=14%  Similarity=0.162  Sum_probs=195.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCC----C----CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLK----G----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~----~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|++. |...++..| +++++|+...+++.+|++    .    .++++++++++||||||.+++.+++++|+++
T Consensus       143 d~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~  222 (423)
T PLN02397        143 STIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDL  222 (423)
T ss_pred             CEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence            77888888877 888889999 999999843334666644    1    1456777778999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCC---CCCccccCCCCCceEEEecCccccCCCccceeEEE--e-cccccccCCcchHHHH
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGC---PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTV--V-PEELLFSSGFPVINDF  147 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~--~-~~~~~~~~~~~~~~~~  147 (272)
                      |+++++++|+||+|.++.+++.   ..++..+....+++|+++||||+++++|+|+||++  + +++.+.    ++...+
T Consensus       223 a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~----~~~~~~  298 (423)
T PLN02397        223 IKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAV----RVKSQL  298 (423)
T ss_pred             HHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHH----HHHHHH
Confidence            9999999999999999988641   22333333334579999999999999999999985  4 333310    112233


Q ss_pred             HhhhhhccCCcchHHHHHHHHhccccc----H-HHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCC
Q 036024          148 NRIICTCFNGASNIAQAGGLACLSSEG----L-EAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPG  218 (272)
Q Consensus       148 ~~~~~~~~~~~~~~~~~a~~~~l~~~~----~-~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~  218 (272)
                      .........+++.+.|.++..++.+..    + ++++++++.++++++.+.+.|+++|    +.+..|++|+|+|++++ 
T Consensus       299 ~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~-  377 (423)
T PLN02397        299 KLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLN-  377 (423)
T ss_pred             HHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCC-
Confidence            333334444577889998988887542    1 3478899999999999999999987    78888899999999985 


Q ss_pred             CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       219 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                         .+++.+|++++||.+.+        .+  |++++ .+++++++++++|++++
T Consensus       378 ---~~~~~~Ll~~~~V~v~~--------~~--Ri~~~~~~~~~i~~~~~~i~~~~  419 (423)
T PLN02397        378 ---KEQVDRMTKEYHIYMTR--------DG--RISMAGLSSKNVPYLADAIHAVV  419 (423)
T ss_pred             ---HHHHHHHHHhCCEEECC--------CC--eEEEeeCCHHHHHHHHHHHHHHH
Confidence               46899999999999962        22  99986 79999999999999864

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=5.4e-36  Score=242.95  Aligned_cols=261  Identities=19%  Similarity=0.283  Sum_probs=217.8

Q ss_pred             cccccC-cccchHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            6 SVIVGQ-AGDLEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         6 ~~~~~~-~~~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      ++++-| ||.|...+.-.| ++.++.+-++.+|++|++.     .++|.+++++||+||+|.+++.+.+++|++.|++++
T Consensus       153 ILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klg  232 (447)
T KOG0259|consen  153 ILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLG  232 (447)
T ss_pred             eecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhC
Confidence            444444 445777777788 9999999999999999776     288999999999999999999999999999999999


Q ss_pred             CEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHHHhhhhhccC
Q 036024           79 SIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      ++||.||+|.+++|++.+ .++..+. .--.++.++|.||-|-.||||+||++..+.. +.+..+. ...+..+..... 
T Consensus       233 i~vIaDEVY~~~vfg~~pfvpmg~fs-siVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~-~q~~~~~~~~~~-  309 (447)
T KOG0259|consen  233 IMVIADEVYGHTVFGDKPFVPMGKFS-SIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKV-VQGIKNFLDIIP-  309 (447)
T ss_pred             CeEEehhhcceeecCCCCccchhhcc-ccCceEeecccccccccCCceeeeEEEecccccccchHH-HHHHHHHHhccC-
Confidence            999999999999999764 3444442 2245799999999998999999999886544 2222221 233444444444 


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecCCCceEEEeecC------CCChHHHHHHH
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGGINAPYVWAHFP------GRKSWDVFAEI  228 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~i~l~------~~~~~~~~~~l  228 (272)
                      +++++.|.|+-.+|+...+++.....+-++.+.+...+.|+++ ++. ...|++++|+|+.+.      -.++.+++..|
T Consensus       310 ~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL  389 (447)
T KOG0259|consen  310 GPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKL  389 (447)
T ss_pred             CccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHH
Confidence            4899999999999997777889999999999999999999998 888 467899999999986      24788999999


Q ss_pred             HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      .+|.++.+.||..|+.  ++|+|+++..+.+.+++++.||+.+
T Consensus       390 ~~Eesv~~LPG~af~~--~nw~Ri~i~~~~~~leea~~Rik~F  430 (447)
T KOG0259|consen  390 AREESVICLPGQAFGL--KNWLRIVITVEEEMLEEAFSRIKEF  430 (447)
T ss_pred             hhhcceEEeccccccC--CCeEEEEEccChHHHHHHHHHHHHH
Confidence            9999999999999987  7999999999999999999999874

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.5e-37  Score=267.45  Aligned_cols=251  Identities=17%  Similarity=0.193  Sum_probs=194.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-------C-CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-------T-SRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-------~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|++. |...++..| +++++|+.+++++.+|++.       . ++.+++++++||||||.+++.+++++|+++
T Consensus       125 d~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~  204 (404)
T PTZ00376        125 TTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADV  204 (404)
T ss_pred             CEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence            77888888887 889999999 9999999544356566332       1 345667778999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCC---CCCccccCCCCCceEEEecCccccCCCccceeEE---EecccccccCCcchHHHH
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGC---PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWT---VVPEELLFSSGFPVINDF  147 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~---~~~~~~~~~~~~~~~~~~  147 (272)
                      |++|+++||+||+|.++.+++.   ..++..+....+++++++||||.||++|+|+||+   +.+++...    ++.+.+
T Consensus       205 a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~----~l~~~~  280 (404)
T PTZ00376        205 MKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAA----NVLSQL  280 (404)
T ss_pred             HHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHH----HHHHHH
Confidence            9999999999999999888641   2233333334468999999999999999999998   45655410    012233


Q ss_pred             HhhhhhccCCcchHHHHHHHHhcccccH-----HHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCC
Q 036024          148 NRIICTCFNGASNIAQAGGLACLSSEGL-----EAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPG  218 (272)
Q Consensus       148 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~  218 (272)
                      ..........++.++|.++..++.+...     +++++.+++++++++.+.+.|++.+    +.+..+++|+|+|+.++ 
T Consensus       281 ~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~-  359 (404)
T PTZ00376        281 KLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLT-  359 (404)
T ss_pred             HHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCC-
Confidence            3333333444677899999999985431     3467778899999999999999874    45667889999999884 


Q ss_pred             CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       219 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                         .+++.+|++++||.+.||        +  |++++ .+++++++++++|++++
T Consensus       360 ---~~~~~~L~~~~~v~v~p~--------~--Ris~~~~~~~~~~~~~~~l~~~~  401 (404)
T PTZ00376        360 ---KEQVERLIEKYHIYLLDN--------G--RISVAGLTSKNVDYVAEAIHDVV  401 (404)
T ss_pred             ---HHHHHHHHHhCCEeecCC--------C--eEEEeccCHHhHHHHHHHHHHHH
Confidence               478889999999999886        1  99996 69999999999998763

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=100.00  E-value=2.6e-36  Score=259.12  Aligned_cols=247  Identities=17%  Similarity=0.264  Sum_probs=191.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcc---cCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFF---PDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~---~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..|++. |...++..| +++++|++.++++.   .|++.    .+++++++++|||||||.+++.+   +|.+++
T Consensus        98 ~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPTG~~~~~~---~l~~l~  174 (360)
T PRK07392         98 RAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQLTPNDGLLLNNPHNPTGKLWSRE---AILPLL  174 (360)
T ss_pred             CeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhccCCCEEEEeCCCCCCCCCcCHH---HHHHHH
Confidence            56777777666 888999999 99999998776652   33332    35788999999999999999955   555666


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +++++ +|+||+|.++.+++...++.......+++++++||||.||+||+|+||++++++.        ++.+....  .
T Consensus       175 ~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~--------~~~~~~~~--~  243 (360)
T PRK07392        175 EQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDR--------LQRWQQWR--D  243 (360)
T ss_pred             HHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHH--------HHHHHhhC--C
Confidence            67775 6679999998876543443332234578999999999999999999999998877        55555433  2


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcC
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTH  233 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~g  233 (272)
                      ..+.+.++|.++.+++++  ..+.+..++.++++++.+.+.|+.+ |+.+.+ .+++|+|++++. +..++...+++++|
T Consensus       244 ~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~~~~~-~~~~l~~~ll~~~g  319 (360)
T PRK07392        244 PWPVNGLAAAAAIAALAD--RDFQQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLVQSQG-SALQLQEKLLQQHR  319 (360)
T ss_pred             CCCCCHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEEEcCC-CHHHHHHHHHhhCC
Confidence            345889999999999974  3455667788999999999999987 787765 679999999875 56677788888889


Q ss_pred             eEeeCCCCCCCCCCCeEEEEccCCH--HHHHHHHHHH
Q 036024          234 ITTVPGSGFGPGGEEYIRISGFGHR--ESILEASRRL  268 (272)
Q Consensus       234 i~v~~g~~~~~~~~~~~R~s~~~~~--~~i~~~l~~l  268 (272)
                      |.+.||..|+..+++++|++++.++  +++.++++++
T Consensus       320 v~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~  356 (360)
T PRK07392        320 ILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAI  356 (360)
T ss_pred             EEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence            9999999997666789999986643  4566666665

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=100.00  E-value=3.7e-36  Score=262.96  Aligned_cols=256  Identities=21%  Similarity=0.282  Sum_probs=189.4

Q ss_pred             ccccc-ccCcc-cchHHhcccc-----eeEEeecCCC-CCcccCCCC---CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVI-VGQAG-DLEDEVGKYC-----NIEYLECGPG-NNFFPDLKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~-~~~~~-~~~~~~~~~g-----~~~~~~~~~~-~~~~~dl~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++ ..|.+ .|...+...+     ....++++.+ .++.+|++.   .+++++++++|||||||.+++.+++++|++
T Consensus       127 d~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~  206 (416)
T PRK09440        127 KKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLHIDEDTGAICVSRPTNPTGNVLTDEELEKLDA  206 (416)
T ss_pred             CeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcccCCCceEEEEecCCCCCCccCCHHHHHHHHH
Confidence            46776 45554 4665433222     2222333322 135566443   357899999999999999999999999999


Q ss_pred             HHHHcCCEEEEcccCCccccCCCCCCcccc-CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh
Q 036024           73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII  151 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~  151 (272)
                      +|++++++||+||+|..+....   ..... ....+++|+++||||. ++||+|+||+++++++        ++.+....
T Consensus       207 ~a~~~~~~iI~De~Y~~~~~~~---~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l--------~~~~~~~~  274 (416)
T PRK09440        207 LARQHNIPLLIDNAYGPPFPGI---IFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEEI--------IEALSNMN  274 (416)
T ss_pred             HHHHcCCcEEEeCCccccCCCc---chhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHHH--------HHHHHHHH
Confidence            9999999999999997543211   11111 1124789999999996 7899999999998887        66777766


Q ss_pred             hhccCCcchHHHHHHHHhcccccH-HHHHH-HHHHHHHHHHHHHHHHHhC----CCeEecCCCceEEEeecCC--CChHH
Q 036024          152 CTCFNGASNIAQAGGLACLSSEGL-EAVHS-VVDYYKENTKILIDTLASL----GIKVYGGINAPYVWAHFPG--RKSWD  223 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~-~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~i~l~~--~~~~~  223 (272)
                      .....+++.+.|.++.+++.+..+ ++..+ .++.++++++.+++.|.+.    ++.+..|++|+|+|+.++.  .+..+
T Consensus       275 ~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~~~~~  354 (416)
T PRK09440        275 GIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLPITTEE  354 (416)
T ss_pred             HHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCCCCCHHH
Confidence            666666899999999999986554 44444 6788899999888888764    4566788889999999985  35556


Q ss_pred             HHHHHHHhcCeEeeCCCCCCCC-------CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          224 VFAEILEKTHITTVPGSGFGPG-------GEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       224 ~~~~ll~~~gi~v~~g~~~~~~-------~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +...+ +++||.+.||+.|++.       +.+++|++++.+++++++++++|++++
T Consensus       355 ~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~  409 (416)
T PRK09440        355 LYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEV  409 (416)
T ss_pred             HHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHHHH
Confidence            66554 6679999999998642       136899999778999999999998763

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.5e-36  Score=259.22  Aligned_cols=249  Identities=17%  Similarity=0.207  Sum_probs=192.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecC-CCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG-PGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~-~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..|++. |...++..| +++++|++ +++++.+|++.      .+++++++++|||||||.+++.++++++++.|
T Consensus       102 ~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~  181 (364)
T PRK04781        102 DAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQAL  181 (364)
T ss_pred             CeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhC
Confidence            46777767666 666667788 99999985 34577666433      36889999999999999999999999999998


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      + ++++||+||+|.+|.+.+   +........+++++++||||+||+||+|+||+++++++        ++.+.+.... 
T Consensus       182 ~-~~~~iI~Deay~~f~~~~---~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l--------~~~l~~~~~~-  248 (364)
T PRK04781        182 Q-GKALVVVDEAYGEFSDVP---SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAEL--------IAVLRRCQAP-  248 (364)
T ss_pred             C-CCcEEEEeCcchhhcCCc---chHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHH--------HHHHHhccCC-
Confidence            5 489999999999887533   22222234578999999999999999999999999888        6666665543 


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcC
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTH  233 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~g  233 (272)
                       .+.+.++|.++..++.+....+..+..+.++++++.+.+.|+.+ |+....+++|+|+|+.++  +..++...+ .++|
T Consensus       249 -~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~--~~~~~~~~l-~~~g  324 (364)
T PRK04781        249 -YPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD--DAEAAFQAL-LAAG  324 (364)
T ss_pred             -CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--CHHHHHHHH-HHCC
Confidence             34788889988888886555566667778899999999999988 765345678999999997  345555555 5569


Q ss_pred             eEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          234 ITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       234 i~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      |.+.+|..|. ...+++|+++. ++++.++++++|+++
T Consensus       325 I~v~~~~~~~-~~~~~~Ris~~-~~~~~~~l~~al~~~  360 (364)
T PRK04781        325 VVVRDQRAAP-RLSDALRITLG-TPEQNDRVLAALQRT  360 (364)
T ss_pred             eEEeeCCCCC-CCCCeEEEeCC-CHHHHHHHHHHHHHH
Confidence            9999998774 33679999985 566777777776653

>PLN02672 methionine S-methyltransferase

Probab=100.00  E-value=3.6e-36  Score=279.41  Aligned_cols=259  Identities=15%  Similarity=0.164  Sum_probs=200.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCC-CccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPN-NPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~-nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..|++. |...++..| +++.+|++++++|.+|++.+     + ..++++++||| ||||.+++.+++++|+++|
T Consensus       779 D~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela  858 (1082)
T PLN02672        779 GTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVC  858 (1082)
T ss_pred             CEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHH
Confidence            67888887666 889999999 99999998777899884332     2 34689999997 9999999999999999999


Q ss_pred             HHcCCEEEEcccCCccccCCCCC---Ccc----ccCC--CCCceEEEecCccccCCCccceeEEEecccccccCCcchHH
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPR---SIY----EIPG--AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN  145 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~---~~~----~~~~--~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~  145 (272)
                      ++||++||+||+|.++.+++...   ++.    ....  ...++++++||||.+++||+|+||++++++.+       ++
T Consensus       859 ~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eL-------i~  931 (1082)
T PLN02672        859 AKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVL-------ID  931 (1082)
T ss_pred             HHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHH-------HH
Confidence            99999999999999888865321   111    1111  12479999999999999999999999977631       55


Q ss_pred             HHHhhhhhccC-CcchHHHHHHHHhcc--ccc-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC----
Q 036024          146 DFNRIICTCFN-GASNIAQAGGLACLS--SEG-LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP----  217 (272)
Q Consensus       146 ~~~~~~~~~~~-~~~~~~~~a~~~~l~--~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~----  217 (272)
                      .+......... ..+..++.++.+++.  ... .+++++.++.++++++++.+.|++.|+.+..|++|+++|+.++    
T Consensus       932 ~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~PeGGFfLwl~l~~~l~ 1011 (1082)
T PLN02672        932 AFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGWDVLEPQGGISMVAKPSAYLG 1011 (1082)
T ss_pred             HHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEecCCcEEEEEEEcccccc
Confidence            66544322211 122333333333332  122 2577888899999999999999999999999999999999763    


Q ss_pred             --------------CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          218 --------------GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       218 --------------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                                    +.+..++..+|++++||.+.||+.|+.  ++++|++++.+++++++++++|+++
T Consensus      1012 ~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~--~g~~RIsfa~~~e~LeeALerL~kf 1077 (1082)
T PLN02672       1012 KTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI--PGYCRFSFALEDSEFDRALKAIARF 1077 (1082)
T ss_pred             ccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC--CCeEEEEecCCHHHHHHHHHHHHHH
Confidence                          124677888999989999999988764  6899999988899999999999876

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.1e-36  Score=254.81  Aligned_cols=245  Identities=24%  Similarity=0.349  Sum_probs=199.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----C-CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----T-SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |++++..|++. |...++..| +++.+|..+   |..|++.    . .++++++++|||||||..++.++++++++.+.+
T Consensus       100 d~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~  176 (356)
T COG0079         100 DTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALPE  176 (356)
T ss_pred             CEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC
Confidence            67888877777 888888899 999999986   6666443    2 369999999999999999999999999999988


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                       +.++|+||+|.+|..    .+...+...++|+++++||||+||++|+|+||+++++++        ++.+.+.+...  
T Consensus       177 -~~~vVvDEAY~eF~~----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~--------i~~l~~vr~p~--  241 (356)
T COG0079         177 -GGLVVIDEAYIEFSP----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPEL--------IAALNKVRPPF--  241 (356)
T ss_pred             -CcEEEEeCchhhcCC----chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHH--------HHHHHHhcCCC--
Confidence             999999999999875    222222225678999999999999999999999999988        77777666543  


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe-EecCCCceEEEeecCCCChHHHHHHHHHhcCeE
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK-VYGGINAPYVWAHFPGRKSWDVFAEILEKTHIT  235 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~  235 (272)
                      ..+.+++.++.+++.+.  +++++.++.+.+.++++.+.|+.+|+. +.+ +.++|++++++......+...|+++ ||.
T Consensus       242 ~v~~~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~p-S~aNFvlv~~~~~~~~~l~~~L~~~-gii  317 (356)
T COG0079         242 NVSSPALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFP-SQANFVLVRVPDAEAAALAEALLKK-GIL  317 (356)
T ss_pred             CCCHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeecC-CCCcEEEEECCCccHHHHHHHHHHC-CEE
Confidence            48899999999999865  788999999999999999999999855 555 4699999999852244566666666 999


Q ss_pred             eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++.... ....++++|+++. +++|.++++++|++++
T Consensus       318 vR~~~~-~~~~~~~lRitvg-t~een~~ll~AL~~~~  352 (356)
T COG0079         318 VRDCSS-VGLLPGYLRITVG-TPEENDRLLAALREVL  352 (356)
T ss_pred             EEeCCC-CCCCCCeEEEEeC-CHHHHHHHHHHHHHHH
Confidence            999876 4455789999985 5555599998887653

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=3.5e-36  Score=261.39  Aligned_cols=251  Identities=16%  Similarity=0.157  Sum_probs=194.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC--------CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT--------SRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~--------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|++. |...++..| +++++|+...+++.+|++.+        ++.+++++++||||||.+++.+++++|+++
T Consensus       121 d~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~  200 (396)
T PRK09257        121 AKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAEL  200 (396)
T ss_pred             CeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence            77888888887 888999999 99999984322455564331        223455557999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCC-C-CCCccccCCCCCceEEEecCccccCCCccceeEEEe--c-ccccccCCcchHHHHH
Q 036024           74 ARNNGSIIIFDSAYAAYVTDG-C-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV--P-EELLFSSGFPVINDFN  148 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~-~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~-~~~~~~~~~~~~~~~~  148 (272)
                      |++|++++|+||+|.++.++. . ..++..+....+++|+++||||.++++|+|+||+++  + ++.+.    ++...+.
T Consensus       201 a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~----~~~~~~~  276 (396)
T PRK09257        201 LKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEAD----RVLSQLK  276 (396)
T ss_pred             HHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHH----HHHHHHH
Confidence            999999999999999988652 1 234444443456899999999999988999999984  2 23210    1133443


Q ss_pred             hhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCC
Q 036024          149 RIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGR  219 (272)
Q Consensus       149 ~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~  219 (272)
                      .........++.+.|.++.+++.+..     .++++++++.++++++.+.+.|++.+    +.+..+++|+|+|+.++  
T Consensus       277 ~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~--  354 (396)
T PRK09257        277 ATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLT--  354 (396)
T ss_pred             HHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCC--
Confidence            43344455578889999999998542     36788899999999999999999874    66778889999999985  


Q ss_pred             ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                        .+++.++++++||.+.|.        +  |++++ .+++++++++++|+++|
T Consensus       355 --~~~~~~l~~~~~V~~~p~--------~--ri~~~~~~~~~i~~~~~~i~~~~  396 (396)
T PRK09257        355 --PEQVDRLREEFGVYAVGS--------G--RINVAGLNESNIDYVAEAIAAVL  396 (396)
T ss_pred             --HHHHHHHHHcCCEEEcCC--------C--eEEEeeCCHHHHHHHHHHHHhhC
Confidence              356788889999999762        2  99996 58999999999999875

>PRK07908 hypothetical protein; Provisional

Probab=100.00  E-value=1.9e-35  Score=252.83  Aligned_cols=244  Identities=18%  Similarity=0.293  Sum_probs=187.8

Q ss_pred             ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024            5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII   81 (272)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v   81 (272)
                      .+++..|.+. +...++..| +++.+|++.+  +.+|++.+ +++++++++|||||||.+++.+   +|.++|+ ++.++
T Consensus        98 ~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~--~~~d~~~l~~~~~~i~l~np~NPTG~~~~~~---~l~~l~~-~~~~i  171 (349)
T PRK07908         98 RAAVVHPSFTEPEAALRAAGIPVHRVVLDPP--FRLDPAAVPDDADLVVIGNPTNPTSVLHPAE---QLLALRR-PGRIL  171 (349)
T ss_pred             eEEEeCCCChHHHHHHHHcCCEEEeeccCcc--cCcChhHhccCCCEEEEcCCCCCCCCCcCHH---HHHHHHh-cCCEE
Confidence            3445555554 777778889 9999999754  55554433 5789999999999999999965   4555665 58899


Q ss_pred             EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024           82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI  161 (272)
Q Consensus        82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (272)
                      |+||+|.++..+ ...++...  ..+++++++||||.||++|+|+||+++++++        ++.+......  ...+.+
T Consensus       172 IvDe~y~~~~~~-~~~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~--------~~~~~~~~~~--~~~~~~  238 (349)
T PRK07908        172 VVDEAFADAVPG-EPESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYALGAPDV--------LARLTRGRAH--WPVGTL  238 (349)
T ss_pred             EEECcchhhccC-Cccccccc--cCCCEEEEeecccccCCccceeeeeecCHHH--------HHHHHhcCCC--CCccHH
Confidence            999999987543 34444432  3467899999999999999999999998877        5666554432  336667


Q ss_pred             HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024          162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG  241 (272)
Q Consensus       162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~  241 (272)
                      .+.++.+++.....+++++.++.++++++.+.+.|+++|+++..+++|+|+|+.+++  . +.+.++++++||.+.||+.
T Consensus       239 ~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~~~~~~~~~--~-~~~~~~l~~~gI~v~~g~~  315 (349)
T PRK07908        239 QLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPFVLVRVPD--A-ELLRKRLRERGIAVRRGDT  315 (349)
T ss_pred             HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCCCceEEEEECCc--H-HHHHHHHHhCCEEEEECCC
Confidence            777777777644557888999999999999999999889888888899999999984  3 4455556777999999999


Q ss_pred             CCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          242 FGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       242 ~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      |+..+++++|+|+ .+++++++++++|+++
T Consensus       316 f~~~~~~~vRis~-~~~~~~~~l~~al~~~  344 (349)
T PRK07908        316 FPGLDPDYLRLAV-RPRAEVPVLVQALAEI  344 (349)
T ss_pred             CCCCCCCeEEEEe-CCCccHHHHHHHHHHH
Confidence            8654578999998 4667788888887765

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=5.8e-36  Score=256.72  Aligned_cols=243  Identities=22%  Similarity=0.322  Sum_probs=192.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..|++. |.......| ++++++++.++++.+|++.    .+++|+++++|||||||.+++.+++++|+++|++ 
T Consensus       107 d~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~-  185 (357)
T PRK14809        107 DTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYDGERIVYLTSPHNPTGSEIPLDEVEALAERTDE-  185 (357)
T ss_pred             CEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhcCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCcc-
Confidence            66888888766 555566677 9999999766678777443    2468999999999999999999999999999975 


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG  157 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (272)
                      +++||+||+|.++.+.+.  .+... ...+++++++||||.+|+||+|+||+++++++        ++.+.+...  ...
T Consensus       186 ~~~iI~De~y~~~~~~~~--~~~~~-~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~--------~~~~~~~~~--~~~  252 (357)
T PRK14809        186 ETLVVVDEAYGEFAERPS--AVALV-EERDDVAVLRTFSKAYGLAGLRLGYAVVPEEW--------ADAYARVNT--PFA  252 (357)
T ss_pred             CcEEEEechhhhccCCch--hHHHH-hhCCCEEEEecchhHhcCcchhheeeecCHHH--------HHHHHHhCC--CCC
Confidence            789999999998876432  22222 23478999999999999999999999999887        556655432  345


Q ss_pred             cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024          158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV  237 (272)
Q Consensus       158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~  237 (272)
                      .+.++|.++.+++.+  .+++++.++.++++++.+.+.|...++    +.+|+|+|+.++  +..++...+ +++||.+.
T Consensus       253 ~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~----~~~g~f~~~~~~--~~~~~~~~l-~~~gv~v~  323 (357)
T PRK14809        253 ASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAPTW----ESAGNFVLAEVG--DASAVAEAA-QERGVIVR  323 (357)
T ss_pred             CCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCccC----CCCCCEEEEECC--CHHHHHHHH-HHCCEEEE
Confidence            788888888888864  567888899999999999999876432    458899999986  455666665 56699999


Q ss_pred             CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          238 PGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ||+.|+.  ++++|+++. +++++++++++|++++
T Consensus       324 ~g~~f~~--~~~iRls~~-~~~~~~~~l~~L~~~l  355 (357)
T PRK14809        324 DCTSFGL--PECIRITCG-TREETERAVEVLNEVL  355 (357)
T ss_pred             ECccCCC--CCeEEEecC-CHHHHHHHHHHHHHHh
Confidence            9999864  579999975 5789999999998864

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=2.6e-35  Score=252.43  Aligned_cols=248  Identities=18%  Similarity=0.266  Sum_probs=192.2

Q ss_pred             cccc-cCcccchHHhcccc-eeEEeecCCCCCcccCC---CC-CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            6 SVIV-GQAGDLEDEVGKYC-NIEYLECGPGNNFFPDL---KG-TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         6 ~~~~-~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~dl---~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      +++. +.|+.|...++..| +++++|++++++|.+|.   +. .+++|+++++|||||||.+++.+++++|+++|+++++
T Consensus        97 viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~  176 (356)
T PRK08056         97 AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNI  176 (356)
T ss_pred             EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCC
Confidence            3444 44445788888999 99999998777888762   11 2789999999999999999999999999999999999


Q ss_pred             EEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc
Q 036024           80 IIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA  158 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (272)
                      ++|+||+|.++.+++. ..+.  +. ..+++++++||||.+|++|+|+||++++++.+       ++.+....  ...+.
T Consensus       177 ~ii~De~y~~~~~~~~~~~~~--~~-~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~-------~~~l~~~~--~~~~~  244 (356)
T PRK08056        177 ALILDEAFIDFIPDETGFIPQ--LA-DNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAA-------VARMRRQQ--MPWSI  244 (356)
T ss_pred             EEEEecchhccCCcchHHHHH--hc-cCCCEEEEEechhhccCcchhheeeecCCHHH-------HHHHHHhC--CCCch
Confidence            9999999998876542 1122  22 23578999999999999999999999864331       44554432  23447


Q ss_pred             chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024          159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV  237 (272)
Q Consensus       159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~  237 (272)
                      +.++|.++..++..  ..+.++.++.++++++.+.+.|+.+ ++.+.++ +++|+|+.++. +..++...|++ +||.+.
T Consensus       245 ~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~l~~-~gI~v~  319 (356)
T PRK08056        245 NAFAALAGEVILQD--RAYQQATWQWLAEEGARFYQALCALPLLTVWPG-RANYLFLRCER-PDIDLQRALLT-QRILIR  319 (356)
T ss_pred             hHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CCcEEEEEcCC-ChHHHHHHHHH-CCeEEE
Confidence            77888888888853  3556888899999999999999987 7777665 78999999974 34567777765 599999


Q ss_pred             CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          238 PGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      +|..|...+.+++|+++. ++++.+.+++.|+++
T Consensus       320 ~~~~f~~~~~~~iRis~~-~~~~~~~l~~~l~~~  352 (356)
T PRK08056        320 SCANYPGLDSRYYRVAIR-SAAENERLLAALRNV  352 (356)
T ss_pred             ECCCCCCCCCCEEEEEEc-CHHHHHHHHHHHHHH
Confidence            999986555679999985 567777777777664

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=7.7e-36  Score=256.27  Aligned_cols=249  Identities=20%  Similarity=0.276  Sum_probs=196.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      |.|++..|++. |...+...| +++.+|++ +.+..++ +++  .++++++++++||||||.+++.+++.++++.|+ ++
T Consensus       106 d~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~-~~  183 (359)
T PRK03158        106 TNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVP-SH  183 (359)
T ss_pred             CEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CC
Confidence            66777777666 777778888 99999997 3343333 222  267899999999999999999998888888774 69


Q ss_pred             CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc
Q 036024           79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA  158 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (272)
                      +++|+||+|.++.+++...+........+++++++||||.+|++|+|+||+++++++        ++.+.....  ....
T Consensus       184 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~--------~~~~~~~~~--~~~~  253 (359)
T PRK03158        184 VLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEEL--------IEKLNIARP--PFNT  253 (359)
T ss_pred             cEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHH--------HHHHHHhcC--CCCC
Confidence            999999999988776533332222233468999999999999999999999999887        566655443  2458


Q ss_pred             chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeC
Q 036024          159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVP  238 (272)
Q Consensus       159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~  238 (272)
                      +.++|.++.+++.+  ..+.++.++.++++++.+.+.|.+.|+.+.++ +|+|+|+.++. +..++...+++ +||.+.|
T Consensus       254 ~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~i~~~~~~-~~~~~~~~l~~-~gv~v~~  328 (359)
T PRK03158        254 TRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEYGLFYYPS-QTNFIFVDTGR-DANELFEALLK-KGYIVRS  328 (359)
T ss_pred             CHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeeCCC-cCcEEEEECCC-CHHHHHHHHHH-CCeEEee
Confidence            99999999999974  35667888889999999999999888887664 68899999853 56677777765 5999999


Q ss_pred             CCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          239 GSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       239 g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      |+.|+.  ++++|++++ +++++++++++|++++
T Consensus       329 g~~f~~--~~~iRi~~~-~~~~~~~l~~al~~~~  359 (359)
T PRK03158        329 GAALGF--PTGVRITIG-LKEQNDKIIELLKELL  359 (359)
T ss_pred             CCCCCC--CCeEEEecC-CHHHHHHHHHHHHHhC
Confidence            999863  579999985 7889999999998864

>PRK06836 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.5e-35  Score=253.65  Aligned_cols=254  Identities=26%  Similarity=0.346  Sum_probs=198.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...++..| ++++++++++ ++.+|+++     .++++++++++||||||.+++.+++++|+++|++
T Consensus       121 d~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~  199 (394)
T PRK06836        121 DEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEE  199 (394)
T ss_pred             CEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence            56777777766 878888899 9999999865 45566443     2679999999999999999999999999999999


Q ss_pred             ------cCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024           77 ------NGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR  149 (272)
Q Consensus        77 ------~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~  149 (272)
                            ||+++|+||+|.++.+++.. .++..   ..+++++++|+||.+|+||+|+||++++++..+  ...+...+..
T Consensus       200 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~---~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~--~~~~~~~~~~  274 (394)
T PRK06836        200 KSKEYGRPIYLISDEPYREIVYDGAEVPYIFK---YYDNSIVVYSFSKSLSLPGERIGYIAVNPEMED--ADDLVAALVF  274 (394)
T ss_pred             hhhccCCCeEEEEeccccccccCCCCCCChHH---ccCcEEEEecchhhccCcceeeEEEecCHHHhh--hHHHHHHHHH
Confidence                  89999999999998876532 22222   246789999999999999999999999876521  1111222221


Q ss_pred             hhhh-ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHH
Q 036024          150 IICT-CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEI  228 (272)
Q Consensus       150 ~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~l  228 (272)
                      .... ....++.+.|.++..++.+..      .++.++++++.+.+.|++.|+.+..+++|+|+|+.++..+..+++.. 
T Consensus       275 ~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~-  347 (394)
T PRK06836        275 ANRILGFVNAPALMQRVVAKCLDATV------DVSIYKRNRDLLYDGLTELGFECVKPQGAFYLFPKSPEEDDVAFCEK-  347 (394)
T ss_pred             HhhccccccCCHHHHHHHHHHhCChH------HHHHHHHHHHHHHHHHHhCCCEeecCCceEEEEEeCCCCCHHHHHHH-
Confidence            1111 123477788998888887521      35678889999999999999998888889999999986556666644 


Q ss_pred             HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++++||.+.||..|+.  .+++|++++.+++++++++++|++++
T Consensus       348 l~~~gv~v~~g~~f~~--~~~iRi~~~~~~~~~~~~i~~l~~~l  389 (394)
T PRK06836        348 AKKHNLLLVPGSGFGC--PGYFRLSYCVDTETIERSLPAFEKLA  389 (394)
T ss_pred             HHhCCEEEECchhcCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            5666999999998864  57999999888999999999998864

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=7e-36  Score=255.35  Aligned_cols=245  Identities=22%  Similarity=0.305  Sum_probs=191.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..|.+. |...++..| +++.+|++++  +.+|++.    .+++++++++|||||||.+++.+++++|++.|++ 
T Consensus       100 ~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~--~~~d~~~l~~~~~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~-  176 (351)
T PRK01688        100 DAILYCPPTYGMYSVSAETIGVEIRTVPTLDN--WQLDLPAIADNLDGVKVVYVCSPNNPTGNLINPQDLRTLLELTRG-  176 (351)
T ss_pred             CEEEEcCCCHHHHHHHHHHcCCEEEEeecCCC--CCCCHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-
Confidence            56777766655 888888899 9999999653  5566433    3688999999999999999999999999999976 


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG  157 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (272)
                      ++++|+||+|.+|....   +...+....+++++++||||+||++|+|+||++++++.        ++.+.+....  +.
T Consensus       177 ~~~vivDEay~~f~~~~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~--------i~~l~~~~~~--~~  243 (351)
T PRK01688        177 KAIVVADEAYIEFCPQA---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEV--------INLLLKVIAP--YP  243 (351)
T ss_pred             CcEEEEECchhhcCCCC---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHH--------HHHHHhccCC--CC
Confidence            68999999999886332   22232223468999999999999999999999998888        5566654432  34


Q ss_pred             cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024          158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT  236 (272)
Q Consensus       158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v  236 (272)
                      .+.+++.++.+++.+...+++++.++.++++++++.+.|+.+ ++....+++++|+|+.++  +..++...|+++ ||.+
T Consensus       244 v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~--~~~~l~~~L~~~-gi~v  320 (351)
T PRK01688        244 LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT--ASSAVFKSLWDQ-GIIL  320 (351)
T ss_pred             CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--CHHHHHHHHHHC-CeEE
Confidence            677788888888875545677888899999999999999988 665445568999999986  456777777655 9999


Q ss_pred             eCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024          237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLE  269 (272)
Q Consensus       237 ~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~  269 (272)
                      +++..+. +..+++|+|+. +++++++++++|+
T Consensus       321 r~~~~~~-~~~~~iRis~~-~~~e~~~l~~al~  351 (351)
T PRK01688        321 RDQNKQP-GLSNCLRITIG-TREECQRVIDALR  351 (351)
T ss_pred             EECCCcC-CCCCeEEEeCC-CHHHHHHHHHhhC
Confidence            9876552 23679999985 6789999988874

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-35  Score=240.07  Aligned_cols=259  Identities=20%  Similarity=0.287  Sum_probs=212.4

Q ss_pred             ccccccCccc-chHHh-cccc-eeEEeecCCCCCcccCCCC-----------CCCceEEEEecCCCccccCCCHHHHHHH
Q 036024            5 SSVIVGQAGD-LEDEV-GKYC-NIEYLECGPGNNFFPDLKG-----------TSRTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         5 ~~~~~~~~~~-~~~~~-~~~g-~~~~~~~~~~~~~~~dl~~-----------~~~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      +.+++-|+++ +...+ .+-| +++|+.+...+++.++.++           ..+.|.++++||+||.|.+++++++..+
T Consensus       172 afLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~l  251 (471)
T KOG0256|consen  172 AFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISL  251 (471)
T ss_pred             eeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHH
Confidence            3444445444 55443 4566 9999999999999988544           2678999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEcccCCccccCCC-CCCccccCC----CCCceEEEecCccccCCCccceeEEEecccccccCCcchHH
Q 036024           71 VEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPG----AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN  145 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~----~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~  145 (272)
                      +.+|.++++.+|+||+|..-+++.. ..++.++..    .++++.++-|+||.+|+||+|+|.+...++.+       . 
T Consensus       252 l~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~V-------v-  323 (471)
T KOG0256|consen  252 LNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDV-------V-  323 (471)
T ss_pred             HHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHH-------H-
Confidence            9999999999999999998888754 345544421    45789999999999999999999999988883       2 


Q ss_pred             HHHhhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-----
Q 036024          146 DFNRIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-----  218 (272)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-----  218 (272)
                      ....-++... ..++..|..+..+|.+..+  .++++.+++++.+.+++.++|+++|+.+...++|.|+|+++..     
T Consensus       324 saA~kmssf~-~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~  402 (471)
T KOG0256|consen  324 SAATKMSSFG-LVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSL  402 (471)
T ss_pred             HHHHHHhhcc-CCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcC
Confidence            3332233333 3888999999999997555  7899999999999999999999999999999999999999852     


Q ss_pred             --CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHH-HHHHHHHhC
Q 036024          219 --RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILE-ASRRLEALF  272 (272)
Q Consensus       219 --~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~-~l~~l~~~l  272 (272)
                        ....+++.+++++.++.+.||++|.-..+||+|++|++..++..+ +++||++++
T Consensus       403 tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~  459 (471)
T KOG0256|consen  403 TFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFL  459 (471)
T ss_pred             ChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHH
Confidence              234568888999989999999999877799999999887777666 999998764

>PRK08637 hypothetical protein; Provisional

Probab=100.00  E-value=2.6e-35  Score=255.15  Aligned_cols=255  Identities=18%  Similarity=0.202  Sum_probs=191.1

Q ss_pred             cccccccCccc-chHHhc-ccc-eeEEeecC-CCCCcccC-CCC-----CCCce-EEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVG-KYC-NIEYLECG-PGNNFFPD-LKG-----TSRTD-IIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~-~~g-~~~~~~~~-~~~~~~~d-l~~-----~~~~~-~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..|++. |...+. ..| +++++|+. +++++.+| +++     .++.+ +++++|||||||.+++.+++++|++
T Consensus        94 d~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~  173 (388)
T PRK08637         94 DTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVE  173 (388)
T ss_pred             CEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence            67888888777 666544 578 99999984 44455544 322     12344 5666699999999999999999999


Q ss_pred             HHHH-----cCCEEEEcccCCccccCCCC-CCc-cccCCCCCce--EEEecCccccCCCccceeEEEecc------cccc
Q 036024           73 FARN-----NGSIIIFDSAYAAYVTDGCP-RSI-YEIPGAREVA--IEISSFSKFSGFTGVRLGWTVVPE------ELLF  137 (272)
Q Consensus        73 ~~~~-----~~~~vi~D~~~~~~~~~~~~-~~~-~~~~~~~~~~--i~~~s~sK~~g~~g~r~G~~~~~~------~~~~  137 (272)
                      +|++     ++++||+||+|.++.+++.. .++ ..+.+..+++  ++++|+||.+++||+|+||++++.      ++  
T Consensus       174 ~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l--  251 (388)
T PRK08637        174 AIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTV--  251 (388)
T ss_pred             HHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHH--
Confidence            9875     89999999999999887643 232 2222334564  556799999999999999999753      33  


Q ss_pred             cCCcchHHHHHhh----hhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCC
Q 036024          138 SSGFPVINDFNRI----ICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL----GIKVYGGIN  208 (272)
Q Consensus       138 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~  208 (272)
                            .+.+...    ........+.++|.++..++.+..+ .+.++.++.++++.+.+.+.|+..    ++.+..+++
T Consensus       252 ------~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~  325 (388)
T PRK08637        252 ------KEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNS  325 (388)
T ss_pred             ------HHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccc
Confidence                  3444321    1223345888999999999986544 567777888999999999999765    577888889


Q ss_pred             ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          209 APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       209 ~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      |+|+|+.+++.++.+++..+++++||.+.+.      +++++|++++. +++++++++++|++++
T Consensus       326 g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~------~~~~iRi~~~~~~~~~i~~~~~~l~~~~  384 (388)
T PRK08637        326 GYFMCLKLKGVDAEELRVHLLEKYGIGTIAL------NETDLRIAFSCVEEEDIPELFDSIYKAI  384 (388)
T ss_pred             eEEEEecCChHHHHHHHHHHhhhcceEEEec------cCCceEEEeecCCHHHHHHHHHHHHHHH
Confidence            9999999985456778888877789988742      25789999865 7889999999998764

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=1.1e-35  Score=255.06  Aligned_cols=242  Identities=22%  Similarity=0.313  Sum_probs=190.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      |.|++..|++. |...+...| +++.+|++.. ++.+| +++  .+++++++++|||||||.+++.+++++|+++|++++
T Consensus       106 d~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~-~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~  184 (366)
T PRK01533        106 DNIVTAGATFPQYRHHAIIEGCEVKEVALNNG-VYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT  184 (366)
T ss_pred             CEEEEcCCcHHHHHHHHHHcCCEEEEeecCCC-CcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC
Confidence            66788877666 888888899 9999999632 43333 322  267899999999999999999999999999998765


Q ss_pred             CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc
Q 036024           79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA  158 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (272)
                       ++|+||+|.++.+.+...+........+++|+++||||.||+||+|+||+++++++        ++.+.....  ....
T Consensus       185 -~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~--------~~~l~~~~~--~~~~  253 (366)
T PRK01533        185 -LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEEL--------IEKLNVVRL--PFNV  253 (366)
T ss_pred             -EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHH--------HHHHHHhcC--CCCc
Confidence             67789999987765422222222223578999999999999999999999998877        666665543  3568


Q ss_pred             chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeC
Q 036024          159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVP  238 (272)
Q Consensus       159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~  238 (272)
                      +.++|.++.+++.+  ..+.++.++..+++++.+.+.++.+|+++.++ +++|+|+.++  +..++...|++ +||.|++
T Consensus       254 ~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~-~~nf~~~~~~--~~~~~~~~l~~-~GI~Vr~  327 (366)
T PRK01533        254 SSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKENEIPFYQS-QTNFIFLPVE--NGGEIYEACAH-AGFIIRP  327 (366)
T ss_pred             CHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCccCCC-cCcEEEEeCC--CHHHHHHHHHH-CCcEEcc
Confidence            99999999999974  45667888888999999999999889888876 7889999986  44566666665 5999997


Q ss_pred             CCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          239 GSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       239 g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                         |    ++++|+++ .+.++.++++++|+++
T Consensus       328 ---~----~~~iRis~-~~~~~~~~l~~al~~~  352 (366)
T PRK01533        328 ---F----PNGVRITV-GTREQNEGVISVLQQH  352 (366)
T ss_pred             ---C----CCceEEeC-CCHHHHHHHHHHHHHH
Confidence               3    36899997 5778889999888765

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=2.2e-34  Score=244.72  Aligned_cols=233  Identities=18%  Similarity=0.214  Sum_probs=184.2

Q ss_pred             cccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024            6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF   83 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~   83 (272)
                      +++..|++. |...++..| ++++++++.+     .+.  ..+++++++|||||||.+++.+++++|++.|++++.++|+
T Consensus        96 v~v~~P~y~~y~~~~~~~g~~~~~v~~~~~-----~~~--~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~  168 (339)
T PRK06959         96 VGIAPLAYSEYAPAFARHGHRVVPLDEAAD-----TLP--AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIV  168 (339)
T ss_pred             EEEcCCCcHHHHHHHHHCCCEEEeecccch-----hcc--ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence            556555555 888889999 9999887641     111  3567999999999999999999999999999999999999


Q ss_pred             cccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHH
Q 036024           84 DSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ  163 (272)
Q Consensus        84 D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (272)
                      ||+|.++...   .++..+. ..+++++++||||.||+||+|+||+++++++        ++.+.+...  ....+.++|
T Consensus       169 DEay~~~~~~---~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~l--------i~~l~~~~~--~~~vs~~~q  234 (339)
T PRK06959        169 DEAFADTLPA---ASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVLAAPAL--------LAALRDALG--AWTVSGPAR  234 (339)
T ss_pred             ECCCccCCCc---ccchhcc-CCCCEEEEecChhhcCCcchheEEEecCHHH--------HHHHHHhcC--CCCCcHHHH
Confidence            9999987643   2333333 2467899999999999999999999999887        667766544  234788999


Q ss_pred             HHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCC
Q 036024          164 AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFG  243 (272)
Q Consensus       164 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~  243 (272)
                      .++.+++.+  ..+.++.++.++++++.+.+.|+++|+++..  .++|+|+.++  +..++...|.++ ||.++.   |+
T Consensus       235 ~a~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~~f~~~~~~--~~~~l~~~l~~~-GI~vr~---~~  304 (339)
T PRK06959        235 HAVRAAFAD--AAWQAAMRERLAADGARLAALLRAHGFAVHA--TPLFSWTDDP--RAAALHAALARR-GIWTRY---FA  304 (339)
T ss_pred             HHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHCCCCccC--cceEEEEeCC--CHHHHHHHHHhC-CeEEEE---CC
Confidence            999999975  3456788999999999999999999887762  5789999886  455666666655 999974   32


Q ss_pred             CCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          244 PGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       244 ~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      .  .+++|+++..++++.+++++.|+++
T Consensus       305 ~--~~~lRisi~~~~~e~~~l~~al~~~  330 (339)
T PRK06959        305 P--PPSVRFGLPADEAEWQRLEDALAEC  330 (339)
T ss_pred             C--CCeEEEECCCCHHHHHHHHHHHHHH
Confidence            2  4699999977778888888887764

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=100.00  E-value=2.6e-34  Score=243.65  Aligned_cols=237  Identities=17%  Similarity=0.183  Sum_probs=182.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII   81 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v   81 (272)
                      |.|++..|++. |...++..| +++.+|++..   .   ....++++++++|||||||.+++.+++++|+++|++++++|
T Consensus        87 d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~---~---~~~~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~i  160 (330)
T PRK05664         87 GRVGVLSPCYAEHAHAWRRAGHQVRELDEAEV---E---AALDSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWL  160 (330)
T ss_pred             CEEEEcCCChHHHHHHHHHcCCeEEEechhhH---h---hhhcCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEE
Confidence            67788888777 888889999 9999987521   1   11246789999999999999999999999999999999999


Q ss_pred             EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024           82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI  161 (272)
Q Consensus        82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (272)
                      |+||+|.++..   ..++..+. ..+++++++||||+||+||+|+||+++++++        ++.+.....  ..+.+.+
T Consensus       161 I~DE~y~~~~~---~~s~~~~~-~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l--------~~~~~~~~~--~~~~~~~  226 (330)
T PRK05664        161 VVDEAFMDNTP---QHSLAACA-HRPGLIVLRSFGKFFGLAGARLGFVLAEPAL--------LRALAELLG--PWTVSGP  226 (330)
T ss_pred             EEECCcccCCC---cccccccc-cCCCEEEEeeccccccCCCcceEEEEeCHHH--------HHHHHHhcC--CCCCCHH
Confidence            99999987642   13444554 3468999999999999999999999999887        566665533  2346788


Q ss_pred             HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024          162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG  241 (272)
Q Consensus       162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~  241 (272)
                      .|.++.+++.+.  .+.++.++.++++++.+.+.|++.|+...+ ..++|+|+.++  +..++...+ +++||.+.+   
T Consensus       227 ~~~~~~~~L~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~f~~~~~~--~~~~~~~~l-~~~gi~v~~---  297 (330)
T PRK05664        227 TRWLAQAALADT--PWQRRQRERLLAASQRLAALLRRHGLTPAG-GCALFQWVRTE--DAAALHEFL-ARRGILTRL---  297 (330)
T ss_pred             HHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CcceEEEEecC--CHHHHHHHH-HHCCeEEEE---
Confidence            889888888743  445778899999999999999998875332 23478888875  455666555 555999974   


Q ss_pred             CCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          242 FGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       242 ~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      |+  ..+++|+++..++++++++++.|+++
T Consensus       298 f~--~~~~iRis~~~~~~~~~~l~~al~~~  325 (330)
T PRK05664        298 FE--QPASLRFGLPADEADWARLDQALLAY  325 (330)
T ss_pred             CC--CCCeEEEECCCCHHHHHHHHHHHHHH
Confidence            43  25799999976677777777776653

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1e-34  Score=250.25  Aligned_cols=239  Identities=18%  Similarity=0.233  Sum_probs=183.3

Q ss_pred             ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC---------CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT---------SRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~---------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      .|++..|++. |...++..| +++.++++++ ++.+|++.+         +++|+++++|||||||.+++.+++++++++
T Consensus       118 ~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~  196 (374)
T PRK02610        118 SILVAEPTFSMYGILAQTLGIPVVRVGRDPE-TFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSL  196 (374)
T ss_pred             eEEEcCCChHHHHHHHHHcCCEEEEecCCcc-cCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhc
Confidence            5777777776 888889999 9999998754 566774442         578999999999999999999999999988


Q ss_pred             HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      |  ++++||+||+|.++.+..   .+..+. ..+++|+++||||++|+||+|+||+++++++        ++.+..... 
T Consensus       197 ~--~~~~iI~De~Y~~~~~~~---~~~~~~-~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l--------~~~l~~~~~-  261 (374)
T PRK02610        197 P--EDILVVIDEAYFEFSQTT---LVGELA-QHPNWVILRTFSKAFRLAAHRVGYAIGHPEL--------IAVLEKVRL-  261 (374)
T ss_pred             c--CCcEEEEeccccccCccc---hHHHHh-cCCCEEEEEecchhccCcccceeeeecCHHH--------HHHHHHhcC-
Confidence            6  499999999999875321   222232 2357889999999999999999999998877        566655542 


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC-CChHHHHHHHHHh
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG-RKSWDVFAEILEK  231 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~  231 (272)
                       ..+.+.+.|.++..++.. ...+.+.+++.+++ ++.+.+.|+.+ ++.+. +++|+|+|+.++. .+..++...+ ++
T Consensus       262 -~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~-p~~g~f~~~~l~~~~~~~~~~~~l-~~  336 (374)
T PRK02610        262 -PYNLPSFSQLAAQLALEH-RQELLAAIPEILQE-RDRLYQALQELPQLRVW-PSAANFLYLRLSQDAALAALHQAL-KA  336 (374)
T ss_pred             -CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHH-HHHHHHHHHhCCCcEeC-CCcceEEEEeCCCCCCHHHHHHHH-HH
Confidence             234788999988888873 34555655555554 67788888877 77654 5789999999985 3556666665 56


Q ss_pred             cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.++       .+++|+++.. .+++++++++|++++
T Consensus       337 ~gi~v~~~-------~~~lRls~~~-~~~~~~~l~~l~~~l  369 (374)
T PRK02610        337 QGTLVRHT-------GGGLRITIGT-PEENQRTLERLQAAL  369 (374)
T ss_pred             CCEEEEeC-------CCeEEEeCCC-HHHHHHHHHHHHHHH
Confidence            69999753       4689999864 567899999998764

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=9.4e-35  Score=248.84  Aligned_cols=246  Identities=24%  Similarity=0.303  Sum_probs=189.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI   80 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~   80 (272)
                      |.|++..|++. |...++..| +++.+|++.+..+.++ ++..+++|+++++|||||||.+++.+++++|++.|+  +++
T Consensus       103 d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~--~~~  180 (354)
T PRK04635        103 DSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQLDGAKLVFICNPNNPTGTVIDRADIEQLIEMTP--DAI  180 (354)
T ss_pred             CeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHhccCCCEEEEeCCCCCCCccCCHHHHHHHHHhCC--CcE
Confidence            66777777766 777788889 9999999754333333 333478999999999999999999999999998875  499


Q ss_pred             EEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcch
Q 036024           81 IIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN  160 (272)
Q Consensus        81 vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (272)
                      +|+||+|.++....   +...+....+++++++||||.+|++|+|+||+++++++        ++.+.....  ..+.+.
T Consensus       181 vivDeay~~~~~~~---s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~--------~~~l~~~~~--~~~~~~  247 (354)
T PRK04635        181 VVVDEAYIEFCPEY---SVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEEL--------IEILMRVIA--PYPVPL  247 (354)
T ss_pred             EEEeCchHhhccCc---chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHH--------HHHHHhhcC--CCCCCH
Confidence            99999999876332   33333234467899999999999999999999999887        555554332  334677


Q ss_pred             HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCC
Q 036024          161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPG  239 (272)
Q Consensus       161 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g  239 (272)
                      +.|.++.+++.+.+.+++++.++.++++++.+.+.|++++ +++.++ +|.|+|+.++  +..++. ++++++||.+.++
T Consensus       248 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~~~~~--~~~~~~-~~l~~~gv~v~~~  323 (354)
T PRK04635        248 PVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG-NGNYVLAKFD--DVDAVF-KALWDAGIVARAY  323 (354)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC-CCcEEEEECC--CHHHHH-HHHHHCCEEEEEC
Confidence            8888888888766566678888899999999999999985 777766 5789999987  344554 4556779999865


Q ss_pred             CCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          240 SGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       240 ~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      ..+  ...+++|+|+ .+.+++++++++|++.
T Consensus       324 ~~~--~~~~~lRis~-~~~e~~~~l~~al~~~  352 (354)
T PRK04635        324 KDP--RLANCIRFSF-SNRAETDKLIGLIRNQ  352 (354)
T ss_pred             CCC--CCCCeEEEEe-CCHHHHHHHHHHHHHh
Confidence            432  2367999997 5789999999999764

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-34  Score=248.57  Aligned_cols=248  Identities=23%  Similarity=0.281  Sum_probs=186.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      |.|++..|.+. +...++..| ++++++++.+.++.++ +++  .+++++++++|||||||.+++.+++++|+++|++ +
T Consensus       113 d~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~-~  191 (371)
T PRK05166        113 DRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDATPP-E  191 (371)
T ss_pred             CEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-C
Confidence            66777766665 777778889 9999999765444443 322  2578999999999999999999999999999864 8


Q ss_pred             CEEEEcccCCccccCCCCCCcccc-CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024           79 SIIIFDSAYAAYVTDGCPRSIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG  157 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (272)
                      +++|+||+|.++.+++...+.... ....+++|+++||||.||++|+|+||++++++.+       .+.+.....  ..+
T Consensus       192 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l-------~~~~~~~~~--~~~  262 (371)
T PRK05166        192 TLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPEL-------VGLLDRVRT--PFN  262 (371)
T ss_pred             cEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHH-------HHHHHHhcc--CCC
Confidence            999999999998865433343332 2234679999999999999999999988754432       555554332  344


Q ss_pred             cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024          158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV  237 (272)
Q Consensus       158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~  237 (272)
                      .+.++|.++.+++.+  ..++++.++.++++++.+.+.|++.|+.+.+ .+|+|+|++++. +..++...++++ ||.+.
T Consensus       263 ~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p-~~g~fl~~~~~~-~~~~l~~~l~~~-gi~v~  337 (371)
T PRK05166        263 VNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEMGYRIAP-SRANFLFFDARR-PASAVAEALLRQ-GVIVK  337 (371)
T ss_pred             CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCcCeeCC-CcCCEEEEeCCC-CHHHHHHHHHHC-CeEEe
Confidence            788889888888864  3577888899999999999999998987654 578999999864 456777777765 99999


Q ss_pred             CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024          238 PGSGFGPGGEEYIRISGFGHRESILEASRRLE  269 (272)
Q Consensus       238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~  269 (272)
                      ||..++  ..+++|++++. .++.+++.+.|+
T Consensus       338 p~~~~~--~~~~iRi~~~~-~~~~~~l~~~l~  366 (371)
T PRK05166        338 PWKQPG--FETFIRVSIGS-PEENDHFVAALD  366 (371)
T ss_pred             cCCCCC--CCCeEEEEcCC-HHHHHHHHHHHH
Confidence            987543  37899999864 334444444443

>PRK09105 putative aminotransferase; Provisional

Probab=100.00  E-value=2.6e-34  Score=247.00  Aligned_cols=242  Identities=20%  Similarity=0.263  Sum_probs=189.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..|++. |...++..| +++.+|++.+  +.+|++.    .+++++++++|||||||.+++.++++++++.|+ +
T Consensus       120 d~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~-~  196 (370)
T PRK09105        120 AGLVTADPTYEAGWRAADAQGAPVAKVPLRAD--GAHDVKAMLAADPNAGLIYICNPNNPTGTVTPRADIEWLLANKP-A  196 (370)
T ss_pred             CEEEEeCCChHHHHHHHHHcCCeEEEecCCCC--CCCCHHHHHhcCCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCC-C
Confidence            67888887777 778888899 9999998754  4445332    367899999999999999999999999998764 5


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG  157 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (272)
                      ++++|+||+|.++...   .+...+....+++++++||||.||++|+|+||+++++++        ++.+...   ....
T Consensus       197 ~~~lIvDEaY~~f~~~---~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~--------i~~l~~~---~~~~  262 (370)
T PRK09105        197 GSVLLVDEAYIHFSDA---PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDL--------LAKLARF---GHNP  262 (370)
T ss_pred             CcEEEEECchHHhccC---cchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHH--------HHHHHhc---CCCC
Confidence            9999999999876532   233444334578999999999999999999999998877        5555544   2334


Q ss_pred             cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024          158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV  237 (272)
Q Consensus       158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~  237 (272)
                      .+.+.|.++.+++.+  .+++++.++.++++++.+.+.|+++|+.+.++++ .|+++.++ .+..++...|+++ ||.+ 
T Consensus       263 ~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~-~f~~~~~~-~~~~~l~~~L~~~-gI~v-  336 (370)
T PRK09105        263 LPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTPSQA-NCFMVDVK-RPAKAVADAMAKQ-GVFI-  336 (370)
T ss_pred             cCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCC-cEEEEeCC-CCHHHHHHHHHHC-CcEE-
Confidence            788888888888874  4678889999999999999999999988887654 45567776 3566788888776 9998 


Q ss_pred             CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          238 PGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                       +..|. ..++++|+++. ++++++++++.|+++
T Consensus       337 -~~~~~-~~~~~~Ris~~-~~~~~~~l~~al~~~  367 (370)
T PRK09105        337 -GRSWP-IWPNWVRVTVG-SEEEMAAFRSAFAKV  367 (370)
T ss_pred             -ecCCC-CCCCeEEEEcC-CHHHHHHHHHHHHHH
Confidence             34453 34689999986 577888888888765

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.7e-34  Score=247.05  Aligned_cols=243  Identities=20%  Similarity=0.268  Sum_probs=188.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..|.+. |...++..| +++.+|.+.  ++.+|++.      .++++++++++||||||.+++.+++++|++.+ 
T Consensus       128 d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-  204 (380)
T PLN03026        128 DKIIDCPPTFGMYVFDAAVNGAEVIKVPRTP--DFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP-  204 (380)
T ss_pred             CEEEEcCCChHHHHHHHHHcCCEEEEeecCC--CCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-
Confidence            66788777776 777777888 999999864  34455332      36889999999999999999988888887653 


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                         +++|+||+|.++.+.+..  .... ...+++++++||||.||++|+|+||+++++++        ++.+.+....  
T Consensus       205 ---~~vi~DeaY~~~~~~~~~--~~~~-~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~--------i~~l~~~~~~--  268 (380)
T PLN03026        205 ---ILVVLDEAYIEFSTQESR--MKWV-KKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSI--------IEYLWRAKQP--  268 (380)
T ss_pred             ---CEEEEECcchhhcCCcch--HHHH-HhCCCEEEEecchHhhcCccccceeeecCHHH--------HHHHHHhcCC--
Confidence               899999999988764322  1212 23578999999999999999999999999887        5666554432  


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi  234 (272)
                      ...+.++|.++.+++.+  .+++++.++.++++++.+.+.|++++.....+++++|+|+.++ +.+..++...|+ ++||
T Consensus       269 ~~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~l~-~~gI  345 (380)
T PLN03026        269 YNVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVTSGRDAKKLKEDLA-KMGV  345 (380)
T ss_pred             CCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECCCCCCHHHHHHHHH-HCCe
Confidence            34788999999999874  3677889999999999999999998533335568999999997 445667777777 5599


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      .+.++..+  ...+++|+|++ ++++++++++.|+++
T Consensus       346 ~v~~~~~~--~~~~~lRis~~-~~~~~~~l~~al~~~  379 (380)
T PLN03026        346 MVRHYNSK--ELKGYIRVSVG-KPEHTDALMEALKQL  379 (380)
T ss_pred             EEEECCCC--CCCCEEEEecC-CHHHHHHHHHHHHHh
Confidence            99998653  34679999986 566777888777654

>PRK06225 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-33  Score=244.69  Aligned_cols=254  Identities=21%  Similarity=0.283  Sum_probs=195.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecC-CCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG-PGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~-~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..|.+. +...+...| ++++++++ .++++.+|++.     .++++++++++||||||.+++.+++++|+++|+
T Consensus       108 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~  187 (380)
T PRK06225        108 DNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIAR  187 (380)
T ss_pred             CEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHH
Confidence            56777777665 556677888 99999985 33456666443     257899999999999999999999999999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      ++|+++|+||+|.++..+.  .+....  .+++++++.||||.+|++|+|+||+++++++        ++.+..... ..
T Consensus       188 ~~~~~ii~De~y~~~~~~~--~~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l--------~~~~~~~~~-~~  254 (380)
T PRK06225        188 DNDAFLLHDCTYRDFAREH--TLAAEY--APEHTVTSYSFSKIFGMAGLRIGAVVATPDL--------IEVVKSIVI-ND  254 (380)
T ss_pred             HCCcEEEEehhHHHHhccC--Cchhhc--CCCCEEEEeechhhcCCccceeEEEecCHHH--------HHHHHHHHh-cc
Confidence            9999999999998775432  222222  3467899999999999999999999998877        555554432 34


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeE-ecCCCceEEEeecC--CCChHHHHHHHHHh
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKV-YGGINAPYVWAHFP--GRKSWDVFAEILEK  231 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~i~l~--~~~~~~~~~~ll~~  231 (272)
                      .+.+.++|.++...+.. ...+.++.++.++++++.+.+.|+++ |..+ ..+.+++++|+.++  +.+..++...|. +
T Consensus       255 ~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~-~  332 (380)
T PRK06225        255 LGTNVIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYLL-E  332 (380)
T ss_pred             cCCCHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHHHHHHHHH-H
Confidence            45788888888888764 34666777888888899999999885 5433 23457889999986  345667777776 5


Q ss_pred             cCeEeeCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.||..|++ .+.+++|++++.+++++++++++|++++
T Consensus       333 ~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~  374 (380)
T PRK06225        333 RKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVV  374 (380)
T ss_pred             CCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHH
Confidence            5999999987753 2467999999888999999999998763

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=9.3e-34  Score=243.84  Aligned_cols=245  Identities=19%  Similarity=0.261  Sum_probs=191.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-C-CC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-L-KG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l-~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..|.+. |...++..| +++.+|++.+ +..++ + +.  .++++++++++||||||.+++.+++++|+++|+ +
T Consensus       109 d~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~-~  186 (369)
T PRK08153        109 DPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD-REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALP-E  186 (369)
T ss_pred             CEEEECCCcchHHHHHHHHcCCeEEEeeCCCC-CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCC-C
Confidence            56777776655 777778888 9999998655 33333 2 21  257899999999999999999999999999987 4


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG  157 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (272)
                      ++++|+||+|.++.+++...++.   ...+++++++||||++|+||+|+||+++++++        ++.+......  .+
T Consensus       187 ~~~lI~DE~y~~~~~~~~~~~~~---~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~--------~~~l~~~~~~--~~  253 (369)
T PRK08153        187 TTLLVLDEAYCETAPAGAAPPID---TDDPNVIRMRTFSKAYGLAGARVGYAIGAPGT--------IKAFDKVRNH--FG  253 (369)
T ss_pred             CcEEEEeCchhhhcCcccchhhh---hcCCCEEEEecchHhccCcchheeeeecCHHH--------HHHHHHhhcC--CC
Confidence            99999999999887665333322   23468999999999999999999999998887        5566554432  45


Q ss_pred             cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC--CChHHHHHHHHHhcCeE
Q 036024          158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG--RKSWDVFAEILEKTHIT  235 (272)
Q Consensus       158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ll~~~gi~  235 (272)
                      .+.++|.++.+++.+  .++.++.++.++++++.+.+.|++.|+.+. +.+++|+|+.++.  ....++..+++++ ||.
T Consensus       254 ~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~-p~~~~f~~~~~~~~~~~a~~l~~~l~~~-Gi~  329 (369)
T PRK08153        254 MNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARANGLTPL-PSATNFVAIDCGRDGAFARAVLDGLIAR-DIF  329 (369)
T ss_pred             CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccC-CCcCcEEEEECCCCcccHHHHHHHHHHC-CeE
Confidence            889999999999973  366788899999999999999998888755 4689999999862  3345666666655 999


Q ss_pred             ee-CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          236 TV-PGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       236 v~-~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      +. |+..   .+.+++|+++. ++++++.+++.|+++
T Consensus       330 v~~p~~~---~~~~~iRis~~-~~~~~~~~~~al~~~  362 (369)
T PRK08153        330 VRMPGVA---PLDRCIRVSCG-PDEELDLFAEALPEA  362 (369)
T ss_pred             EeeCCCC---CCCCeEEEecC-CHHHHHHHHHHHHHH
Confidence            95 6542   23579999986 788999999998875

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-33  Score=242.33  Aligned_cols=246  Identities=22%  Similarity=0.305  Sum_probs=189.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI   80 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~   80 (272)
                      |.|++..|++. |...++..| +++.+|++++  +.+|++.+ .+.++++++|||||||.+++.+++++|++.++  +++
T Consensus       102 d~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~--~~~  177 (353)
T PRK05387        102 RPLLFPDITYSFYPVYAGLYGIPYEEIPLDDD--FSIDVEDYLRPNGGIIFPNPNAPTGIALPLAEIERILAANP--DSV  177 (353)
T ss_pred             CEEEEeCCCHHHHHHHHHHcCCEEEEeecCCC--CCCCHHHHHhcCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC--CcE
Confidence            66788877765 777778889 9999998643  55564443 45688999999999999999999999988653  999


Q ss_pred             EEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh-ccCCcc
Q 036024           81 IIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT-CFNGAS  159 (272)
Q Consensus        81 vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  159 (272)
                      +|+||+|.++.  +.  +........+++++++||||.+|++|+|+||+++++++        ++.+...... ...+.+
T Consensus       178 livDe~y~~~~--~~--~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~--------~~~l~~~~~~~~~~~~~  245 (353)
T PRK05387        178 VVIDEAYVDFG--GE--SAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPEL--------IEALNRVKNSFNSYPLD  245 (353)
T ss_pred             EEEeCcccccC--Cc--chHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHH--------HHHHHHhhccCCCCCcC
Confidence            99999998753  21  11112223467899999999999999999999998877        5666655433 234578


Q ss_pred             hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCC
Q 036024          160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPG  239 (272)
Q Consensus       160 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g  239 (272)
                      .+.|.++.+++.+  .++.++.+++++++++.+.+.|++.|+.+.+ .+++|+|+.+++.+..++...|.+ +||.+.+.
T Consensus       246 ~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~  321 (353)
T PRK05387        246 RLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLP-SKANFVFARHPSHDAAELAAKLRE-RGIIVRHF  321 (353)
T ss_pred             HHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECC-CcCcEEEEECCCCCHHHHHHHHHH-CCEEEEEC
Confidence            8999988888864  3556788899999999999999999987754 578899999886666777777654 59999753


Q ss_pred             CCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          240 SGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       240 ~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ..  +..++++|+++. +.+++++++++|++++
T Consensus       322 ~~--~~~~~~iRis~~-~~~~~~~~~~~L~~~~  351 (353)
T PRK05387        322 NK--PRIDQFLRITIG-TDEEMEALVDALKEIL  351 (353)
T ss_pred             CC--CCCCCeEEEEeC-CHHHHHHHHHHHHHHh
Confidence            21  234679999986 6789999999998764

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=8.4e-34  Score=244.36  Aligned_cols=247  Identities=22%  Similarity=0.339  Sum_probs=193.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...+...| +++.+|.+   ++.+|++.     .+++++++++|||||||.+++.++++++++.|+ 
T Consensus       109 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-  184 (367)
T PRK02731        109 DEVIYSEHGFAVYPIAAQAVGAKPVEVPAK---DYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVP-  184 (367)
T ss_pred             CEEEEecCCHHHHHHHHHHcCCeEEEeccc---CCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCC-
Confidence            56777777665 666677788 99998884   34444332     267899999999999999999999999998875 


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +++++|+||+|.++.+.+. ..++ ......+++++++|+||.||++|+|+||+++++++        ++.+.....  .
T Consensus       185 ~~~~li~De~y~~~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~--------~~~l~~~~~--~  253 (367)
T PRK02731        185 PDVLVVLDEAYAEYVRRKDYEDGL-ELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEI--------IDALNRVRQ--P  253 (367)
T ss_pred             CCcEEEEECcHHHhccCcCcccHH-HHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHH--------HHHHHHccC--C
Confidence            6999999999998776543 2223 22223467899999999999999999999999877        555654443  2


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi  234 (272)
                      ...+.++|.++.+++.+  ..+.++.++.++++++.+.+.|++.|+.+.+ .+|+|+|+.++ ..+..++...|.+ +||
T Consensus       254 ~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~g~~~~i~~~~~~~~~~~~~~L~~-~gI  329 (367)
T PRK02731        254 FNVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAELGLEYIP-SVGNFILVDFDDGKDAAEAYQALLK-RGV  329 (367)
T ss_pred             CCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC-CCceEEEEECCCCCCHHHHHHHHHH-CCE
Confidence            34678899999999874  4567888999999999999999998888764 57899999996 3456677776655 599


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+.++..|+  .++++|+++. +.++++++++.|++++
T Consensus       330 ~v~~~~~~~--~~~~iRis~~-~~~e~~~l~~aL~~~~  364 (367)
T PRK02731        330 IVRPVAGYG--LPNALRITIG-TEEENRRFLAALKEFL  364 (367)
T ss_pred             EEEeCCCCC--CCCeEEEecC-CHHHHHHHHHHHHHHH
Confidence            999998875  2579999985 6788999999988753

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.8e-34  Score=244.81  Aligned_cols=242  Identities=20%  Similarity=0.277  Sum_probs=190.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..|++. |...++..| +++++|++++  +.+|++.      .++++++++++||||||.+++.+++++|+++| 
T Consensus       106 d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~--~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~-  182 (356)
T PRK04870        106 ATVLAPEPGFVMYRMSAKLAGLEFVGVPLTAD--FTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAA-  182 (356)
T ss_pred             CEEEECCCCHHHHHHHHHHcCCEEEEecCCCC--CCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHC-
Confidence            66788777776 778888899 9999999744  4555333      25889999999999999999999999999988 


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                        ++++|+||+|.++.... ..  ..+. ..+++++++|||| +|+||+|+||+++++++        ++.+.....  .
T Consensus       183 --~~~ii~De~y~~~~~~~-~~--~~~~-~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~--------i~~~~~~~~--~  245 (356)
T PRK04870        183 --PGLVVVDEAYQPFAGDS-WL--PRLA-RFPNLLVMRTVSK-LGLAGLRLGYLAGHPAW--------IAELDKVRP--P  245 (356)
T ss_pred             --CCEEEEECCchhhcCcc-hH--HHHh-hCCCEEEEecchh-hhhHHHhhhhhhCCHHH--------HHHHHHccC--C
Confidence              78999999999875432 11  1122 3357899999999 88999999999998877        556655442  2


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi  234 (272)
                      ...+.++|.++..++.+  .+++++.+++++++++.+.+.|+++ |+.+.+ .+++|+|+.++  +..++. +.++++||
T Consensus       246 ~~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~--~~~~~~-~~l~~~gI  319 (356)
T PRK04870        246 YNVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVTVFP-SAANFILVRVP--DAAAVF-DGLKTRGV  319 (356)
T ss_pred             CcCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCeEEEEECC--CHHHHH-HHHHHCCE
Confidence            34778889888887763  3456888899999999999999988 887654 57889999987  445555 45566799


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+.++..|+...++++|++++ +.++.++++++|+++|
T Consensus       320 ~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~  356 (356)
T PRK04870        320 LVKNLSGMHPLLANCLRVTVG-TPEENAQFLAALKAAL  356 (356)
T ss_pred             EEEECCCCCCCCCCeEEEeCC-CHHHHHHHHHHHHHhC
Confidence            999999987666789999986 6788999999998875

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.8e-33  Score=237.70  Aligned_cols=236  Identities=20%  Similarity=0.298  Sum_probs=181.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII   81 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v   81 (272)
                      |.|++..|++. |...++..| +++.+|++++  +.++.....++++++++|||||||.+++.+++++|+    +++++|
T Consensus        97 d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~~~~~~~i~i~nP~NPTG~~~s~~~l~~l~----~~~~~i  170 (335)
T PRK14808         97 DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERIL----KTGAFV  170 (335)
T ss_pred             CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhHccCCCEEEEeCCCCCCCCCcCHHHHHHHH----hcCCEE
Confidence            67777777766 888899999 9999999754  333322245678999999999999999988888776    479999


Q ss_pred             EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024           82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI  161 (272)
Q Consensus        82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (272)
                      |+||+|.++. +....++  . ...+++++++||||++|++|+|+||+++++++        ++.+.+...  ..+.+.+
T Consensus       171 i~DE~Y~~f~-~~~~~~~--~-~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~--------~~~l~~~~~--~~~~~~~  236 (335)
T PRK14808        171 ALDEAYYEFH-GESYVDL--L-KKYENLAVIRTFSKAFSLAAQRIGYVVSSEKF--------IDAYNRVRL--PFNVSYV  236 (335)
T ss_pred             EEECchhhhc-CCchHHH--H-HhCCCEEEEEechhhccCcccceEEEEeCHHH--------HHHHHHhcC--CCCCCHH
Confidence            9999999874 2211121  1 23468999999999999999999999999887        666655542  2447788


Q ss_pred             HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024          162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG  241 (272)
Q Consensus       162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~  241 (272)
                      +|.++..++..  .++.++..+.++++++.+.+.|++.|+++.++ +|.|+|+.+++.+..++...+ .++||.++.   
T Consensus       237 ~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~g~f~~~~l~~~~~~~~~~~l-~~~Gi~V~~---  309 (335)
T PRK14808        237 SQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITDS-RGNFVFIFMEKEEKERLLEHL-RAKNIAVRS---  309 (335)
T ss_pred             HHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC-CCeEEEEeCCCccHHHHHHHH-HHCCeEEEE---
Confidence            89888777763  34567777888888999999999999888776 678999999854555555554 555999984   


Q ss_pred             CCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          242 FGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       242 ~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      |    .+++|+++ .+.++.+++++.|+++
T Consensus       310 ~----~~~~Risi-~~~~~~~~~~~~l~~~  334 (335)
T PRK14808        310 F----REGVRITI-GKREENDMILKELEVF  334 (335)
T ss_pred             C----CCCeEEec-CCHHHHHHHHHHHHhh
Confidence            3    25899997 4578888999888764

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=3.8e-33  Score=229.98  Aligned_cols=258  Identities=19%  Similarity=0.270  Sum_probs=204.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC-----------CCCceEEEEe-cCCCccccCCCHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-----------TSRTDIIFFC-SPNNPTGHAATQNQLE   68 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-----------~~~~~~i~~~-~p~nptG~~~~~~~l~   68 (272)
                      |.|++...++. .....+..| .+++++++.+ |+.++ +++           .++++++|.+ +-+||||.+++.+.++
T Consensus       149 d~vlie~~ty~~AL~s~~a~gv~~ipv~md~~-Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk  227 (472)
T KOG0634|consen  149 DHVLIEEYTYPSALQSMEALGVKIIPVKMDQD-GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRK  227 (472)
T ss_pred             CceEEecccchHHHHhccccCceEEeccccCC-CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHH
Confidence            44555554433 566778889 9999999866 77666 433           2567888887 7799999999999999


Q ss_pred             HHHHHHHHcCCEEEEcccCCccccCC---C------C-----------CCccccCCCCCceEEEecCccccCCCccceeE
Q 036024           69 QLVEFARNNGSIIIFDSAYAAYVTDG---C------P-----------RSIYEIPGAREVAIEISSFSKFSGFTGVRLGW  128 (272)
Q Consensus        69 ~l~~~~~~~~~~vi~D~~~~~~~~~~---~------~-----------~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~  128 (272)
                      +|.++|++|+.+||+||.|..+-++.   .      .           +++.++ +..+|||.+.||||.++ ||+|+||
T Consensus       228 ~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflsl-DtdGrVIr~dSFSKiia-PGlRlG~  305 (472)
T KOG0634|consen  228 KIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSL-DTDGRVIRNDSFSKIIA-PGLRLGW  305 (472)
T ss_pred             HHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccc-cccccEEeccchhhhhc-CcceeEE
Confidence            99999999999999999999777662   1      0           111122 24579999999999997 9999999


Q ss_pred             EEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH----HHHHHHHHHHHHHHHHHHHHHHhC---C-
Q 036024          129 TVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL----EAVHSVVDYYKENTKILIDTLASL---G-  200 (272)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~---g-  200 (272)
                      +.+++..        ++++-......+.+++.+.|.++.+++...++    +|+.+.+..|.+++..+.+.|.+.   + 
T Consensus       306 it~~~~~--------l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~  377 (472)
T KOG0634|consen  306 ITGNSLF--------LKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSV  377 (472)
T ss_pred             eecCHHH--------HHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence            9999988        56666666666677999999999999885444    899999999999999999999885   4 


Q ss_pred             CeEecCCCceEEEeecC--------CCC-hHHHHHHHHHhcCeEeeCCCCCCCC-C----CCeEEEEc-cCCHHHHHHHH
Q 036024          201 IKVYGGINAPYVWAHFP--------GRK-SWDVFAEILEKTHITTVPGSGFGPG-G----EEYIRISG-FGHRESILEAS  265 (272)
Q Consensus       201 ~~~~~~~~~~~~~i~l~--------~~~-~~~~~~~ll~~~gi~v~~g~~~~~~-~----~~~~R~s~-~~~~~~i~~~l  265 (272)
                      .++..|.+|+|+|++++        ..+ .++.....+.++||.+.+|+.|... .    .-++|+++ ..+.|++++++
T Consensus       378 ~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~  457 (472)
T KOG0634|consen  378 CEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGI  457 (472)
T ss_pred             eEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHH
Confidence            67788999999999996        223 4566666777779999999999733 1    23999998 45889999999


Q ss_pred             HHHHHhC
Q 036024          266 RRLEALF  272 (272)
Q Consensus       266 ~~l~~~l  272 (272)
                      ++|..++
T Consensus       458 ~rf~~~i  464 (472)
T KOG0634|consen  458 ERFGSVI  464 (472)
T ss_pred             HHHHHHH
Confidence            9997653

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=100.00  E-value=1e-32  Score=234.07  Aligned_cols=239  Identities=20%  Similarity=0.271  Sum_probs=186.0

Q ss_pred             cccccCcc-cchHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024            6 SVIVGQAG-DLEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF   83 (272)
Q Consensus         6 ~~~~~~~~-~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~   83 (272)
                      +++..|.+ .|...+...| ++++++ +.+ .+.   +...+++++++++||||||.+++.+++++|+++|+++|+++|+
T Consensus        89 vl~~~p~y~~~~~~~~~~g~~~~~~~-d~~-~l~---~~~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~  163 (330)
T TIGR01140        89 VLVLAPTYSEYARAWRAAGHEVVELP-DLD-RLP---AALEELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVV  163 (330)
T ss_pred             EEEeCCCcHHHHHHHHHcCCEEEEeC-CHH-HHH---hhcccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEE
Confidence            55555544 4888888899 998888 211 111   1235678999999999999999999999999999999999999


Q ss_pred             cccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHH
Q 036024           84 DSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ  163 (272)
Q Consensus        84 D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (272)
                      ||+|.++.+..   ++....+..+++++++|+||.+|++|+|+||++++++.        ++.+.....  ..+.+.++|
T Consensus       164 De~y~~~~~~~---~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~--------~~~l~~~~~--~~~~s~~~q  230 (330)
T TIGR01140       164 DEAFIDFTPDA---SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPAL--------LARLREALG--PWTVNGPAR  230 (330)
T ss_pred             ECcccccCCcc---chhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHH--------HHHHHhcCC--CCCchHHHH
Confidence            99999877542   33333223477899999999999999999999998887        555554443  334678899


Q ss_pred             HHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCC
Q 036024          164 AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGF  242 (272)
Q Consensus       164 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~  242 (272)
                      .++.+++.+.  .+.+..+++++++++.+.+.|++++ +++.+ .+++|+|+.+++  ..++...|+++ ||.+.||..|
T Consensus       231 ~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~f~~~~~~~--~~~l~~~l~~~-gi~v~pg~~f  304 (330)
T TIGR01140       231 AAGRAALADT--AWQAATRARLAAERARLAALLARLGGLEVVG-GTALFLLVRTPD--AAALHEALARR-GILIRDFDNF  304 (330)
T ss_pred             HHHHHHHhch--HHHHHHHHHHHHHHHHHHHHHHhCCCceECC-CCCeEEEEEcCC--HHHHHHHHHHC-CEEEEECCCC
Confidence            9999888743  3456788999999999999999996 56554 578999999873  56777777765 9999999999


Q ss_pred             CCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024          243 GPGGEEYIRISGFGHRESILEASRRLE  269 (272)
Q Consensus       243 ~~~~~~~~R~s~~~~~~~i~~~l~~l~  269 (272)
                      +..+.+++|++++...++ ++++++|+
T Consensus       305 ~~~~~~~iRi~~~~~~~~-~~~~~~l~  330 (330)
T TIGR01140       305 PGLDPRYLRFALPTDEEN-DRLEEALA  330 (330)
T ss_pred             CCCCCCEEEEEecCHHHH-HHHHHhhC
Confidence            644567999999766555 88887763

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=1.1e-32  Score=236.89  Aligned_cols=242  Identities=24%  Similarity=0.342  Sum_probs=183.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...++..| +++.++.+.  +|.+|++.     .++++++++++||||||.+++.++   +.++|++
T Consensus       112 d~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~---l~~l~~~  186 (361)
T PRK00950        112 DEVIIPTPTFSYYEISAKAHGAKPVYAKREE--DFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEED---IRKILES  186 (361)
T ss_pred             CEEEEcCCChHHHHHHHHHcCCEEEEeecCC--CCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHH---HHHHHHH
Confidence            56777666655 666677888 898888543  44555333     257899999999999999999655   4555667


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +++++|+||+|.++. +....+   +....+++++++||||.+|+||+|+||+++++++        ++.+......  .
T Consensus       187 ~~~~li~De~y~~~~-~~~~~~---~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~--------~~~~~~~~~~--~  252 (361)
T PRK00950        187 TDALVFVDEAYVEFA-EYDYTP---LALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWL--------IDYYMRAKTP--F  252 (361)
T ss_pred             CCcEEEEECchhhhC-ccchHH---HHHhcCCEEEEEeehHhhcCchhhcchhcCCHHH--------HHHHHHhcCC--C
Confidence            899999999998775 221222   2223367899999999999999999999998887        5555554432  3


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT  236 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v  236 (272)
                      ..+.++|.++.+++.+  .+++++.+++++++++.+.+.|.   +.+.+ .+++|+|+.+++.+..++...+.++ ||.+
T Consensus       253 ~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~---~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~~-gv~v  325 (361)
T PRK00950        253 SLTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP---FKVYP-SEANFVLVDVTPMTAKEFCEELLKR-GVIV  325 (361)
T ss_pred             CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC---eeECC-CcceEEEEECCCCCHHHHHHHHHHC-CEEE
Confidence            3678888888888864  35567778888888888877776   55544 5789999999766677888877765 9999


Q ss_pred             eCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       237 ~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .||..|+..+++++|++++ +.+++++++++|++++
T Consensus       326 ~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il  360 (361)
T PRK00950        326 RDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV  360 (361)
T ss_pred             eeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence            9999886556789999986 6779999999998764

>PLN02368 alanine transaminase

Probab=100.00  E-value=5.7e-33  Score=240.20  Aligned_cols=205  Identities=12%  Similarity=0.165  Sum_probs=166.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      |.|++..|++. |...+...| ++++++++++++|.+|++.+           .++|+++++|||||||.+++.+++++|
T Consensus       156 d~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l  235 (407)
T PLN02368        156 DGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREI  235 (407)
T ss_pred             CEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHH
Confidence            66888888777 888888899 99999998877888885542           168999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEcccCCccccCCC--CCCcccc----C---CCCCceEEEecCcccc-CCCccceeEEEe---cccccc
Q 036024           71 VEFARNNGSIIIFDSAYAAYVTDGC--PRSIYEI----P---GAREVAIEISSFSKFS-GFTGVRLGWTVV---PEELLF  137 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~----~---~~~~~~i~~~s~sK~~-g~~g~r~G~~~~---~~~~~~  137 (272)
                      +++|++++++||+||+|.++.+++.  ..++..+    .   ...+++|+++||||.| |+||+|+||+++   ++++  
T Consensus       236 ~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~l--  313 (407)
T PLN02368        236 LKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKT--  313 (407)
T ss_pred             HHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHH--
Confidence            9999999999999999999998753  2344332    1   1134899999999998 899999999985   6655  


Q ss_pred             cCCcchHHHHHhhhhhccCCcchHHHHHHHHhccccc---------HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC
Q 036024          138 SSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEG---------LEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI  207 (272)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~  207 (272)
                            ++.+..... ...+++.++|.++.+++....         .++.+++.+.++++++.+.+.|+++ |+.+..|+
T Consensus       314 ------i~~~~~~~~-~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~  386 (407)
T PLN02368        314 ------VEEIYKVAS-IALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTE  386 (407)
T ss_pred             ------HHHHHHHhc-ccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCC
Confidence                  566665533 334588899999999997431         1334567899999999999999998 99999999


Q ss_pred             CceEEEeecC
Q 036024          208 NAPYVWAHFP  217 (272)
Q Consensus       208 ~~~~~~i~l~  217 (272)
                      +++|+|++++
T Consensus       387 Gafy~~~~i~  396 (407)
T PLN02368        387 GAMYSFPQIK  396 (407)
T ss_pred             eeeEeccCCC
Confidence            9999998765

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=100.00  E-value=1.7e-32  Score=234.50  Aligned_cols=243  Identities=23%  Similarity=0.371  Sum_probs=190.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...+...| +++.++++.+  +.+|+++     .++++++++++|+||||.+++.++++++++.|+ 
T Consensus        96 d~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~-  172 (346)
T TIGR01141        96 DAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTP-  172 (346)
T ss_pred             CEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-
Confidence            66777776665 666677888 9999998765  4455332     367899999999999999999999999988887 


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +++++|+||+|.++...+.....  . ...+++++++|+||.+|++|+|+||+++++++        ++.+.....  ..
T Consensus       173 ~~~~ii~D~~y~~~~~~~~~~~~--~-~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~--------~~~~~~~~~--~~  239 (346)
T TIGR01141       173 EDALVVVDEAYGEFSGEPSTLPL--L-AEYPNLIVLRTLSKAFGLAGLRIGYAIANAEI--------IDALNKVRA--PF  239 (346)
T ss_pred             CCcEEEEECchhhhcCCccHHHH--H-hhCCCEEEEehhhHhhhchhhhceeeecCHHH--------HHHHHhccC--CC
Confidence            79999999999976643221111  1 12346899999999999899999999998877        556654433  23


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeE
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHIT  235 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~  235 (272)
                      +.+.++|.++.++++..  .+.++.+++++++++.+++.|+++ |+++.+ .++.|+|+.++. +.+++...|.+ +||.
T Consensus       240 ~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~g~~~~~~~~~-~~~~~~~~L~~-~gI~  314 (346)
T TIGR01141       240 NLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVYP-SDANFVLIRFPR-DADALFEALLE-KGII  314 (346)
T ss_pred             CCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEECC-CcCCEEEEecCC-CHHHHHHHHHH-CCeE
Confidence            46788999888888753  367889999999999999999988 888655 478899999986 66677776665 5999


Q ss_pred             eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024          236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLE  269 (272)
Q Consensus       236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~  269 (272)
                      +.||..|+.. .+++|+|+. ++++++++++.|+
T Consensus       315 v~~g~~f~~~-~~~iRls~~-~~~~i~~~~~~l~  346 (346)
T TIGR01141       315 VRDLNSYPGL-PNCLRITVG-TREENDRFLAALR  346 (346)
T ss_pred             EEeCCCcCCC-CCeEEEecC-CHHHHHHHHHHhC
Confidence            9999988543 789999975 7889999998874

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.5e-32  Score=235.17  Aligned_cols=242  Identities=19%  Similarity=0.242  Sum_probs=182.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..|++. |...++..| ++++++.+.  ++.+|++.      .++++++++++||||||.+++.+++++|+++| 
T Consensus       113 d~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~-  189 (368)
T PRK03317        113 RTALGFVPSYSMHPIIARGTHTEWVEGPRAA--DFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAA-  189 (368)
T ss_pred             CEEEEeCCChHHHHHHHHhcCCeeEEcccCC--CCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHC-
Confidence            56777777666 777778888 888887653  44555433      15789999999999999999988888888776 


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                        ++++|+||+|.++.+.+.+ +........+++++++||||.+|++|+|+||+++++++        ++.+.....  .
T Consensus       190 --~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~--------~~~l~~~~~--~  256 (368)
T PRK03317        190 --PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAV--------VDALRLVRL--P  256 (368)
T ss_pred             --CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHH--------HHHHHhcCC--C
Confidence              7999999999988765532 32333222357899999999999999999999998887        566654442  3


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeE
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHIT  235 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~  235 (272)
                      .+.+.++|.++.+++..  .++..+.+++++++++.+.+.|.+.|+.+..+++++++|..++  +..++...+. ++||.
T Consensus       257 ~~~s~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~l~-~~Gv~  331 (368)
T PRK03317        257 YHLSAVTQAAARAALRH--ADELLASVAALRAERDRVVAWLRELGLRVAPSDANFVLFGRFA--DRHAVWQGLL-DRGVL  331 (368)
T ss_pred             CCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEeCCCCCcEEEEeccC--CHHHHHHHHH-HCCEE
Confidence            45888999998888874  2334556677889999999999999998888777777776654  4455666555 45999


Q ss_pred             eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +.+..   .  ++++|+++. +.++++++++.|++++
T Consensus       332 v~~~~---~--~~~iRi~~~-~~~~~~~~~~~l~~~~  362 (368)
T PRK03317        332 IRDVG---I--PGWLRVTIG-TPEENDAFLAALAEVL  362 (368)
T ss_pred             EEeCC---C--CCeEEEecC-CHHHHHHHHHHHHHHH
Confidence            98642   2  579999985 6778899998887753

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=8e-32  Score=230.50  Aligned_cols=242  Identities=21%  Similarity=0.290  Sum_probs=177.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC-C--CCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T--SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~--~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..|++. |...++..| +++.++++++.++.+| +++ .  +++|+++++|||||||.+++.+++.+++   +++
T Consensus       101 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~---~~~  177 (351)
T PRK14807        101 DVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKII---EKS  177 (351)
T ss_pred             CEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHH---HhC
Confidence            67888887766 777778888 9999998754333333 222 1  4889999999999999999966666555   456


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG  157 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (272)
                      +.++|+||+|.++. +....+.  . ...+++++++||||.+|+||+|+||+++++++        ++.+.....  ...
T Consensus       178 ~~~~ivDe~y~~~~-~~~~~~~--~-~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~--------~~~~~~~~~--~~~  243 (351)
T PRK14807        178 RGIVVVDEAYFEFY-GNTIVDV--I-NEFENLIVLRTLSKAFGLAGLRVGYAVANENI--------LKYLNLVKS--PYN  243 (351)
T ss_pred             CCEEEEeCcchhhc-ccchHHH--h-hhCCCEEEEecchHhcccchhceeeeecCHHH--------HHHHHHccC--CCC
Confidence            78899999998763 3222221  1 23468999999999999999999999998887        555654433  234


Q ss_pred             cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024          158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT  236 (272)
Q Consensus       158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v  236 (272)
                      .+.++|.++.+++.+   .+.++..+.++++++.+.+.|++. |+.+.+ .+|+|+|+.++  +..++...++ ++||.+
T Consensus       244 ~~~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~-~~~~~~~i~~~--~~~~~~~~l~-~~gV~v  316 (351)
T PRK14807        244 INSLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIKVYP-SKTNFILVKFK--DADYVYQGLL-ERGILV  316 (351)
T ss_pred             cCHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEECc-CCccEEEEEcC--CHHHHHHHHH-HCCEEE
Confidence            778999999999874   345667778889999999999876 887765 47889999997  3445555555 559999


Q ss_pred             eCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       237 ~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      .++... ...++++|++++ +.++.+.+++.|+++
T Consensus       317 ~~~~~~-~~~~~~iRis~~-~~~~~~~l~~~l~~~  349 (351)
T PRK14807        317 RDFSKV-EGLEGALRITVS-SCEANDYLINGLKEL  349 (351)
T ss_pred             EECCCC-CCCCCeEEEEcC-CHHHHHHHHHHHHHh
Confidence            876532 234679999985 456677777777665

>PRK08354 putative aminotransferase; Provisional

Probab=100.00  E-value=8.7e-32  Score=226.50  Aligned_cols=228  Identities=19%  Similarity=0.282  Sum_probs=161.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI   80 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~   80 (272)
                      |.|++..|++. |...++..| +++.++.+.+ .    +++ ..++++++++|||||||.+++.+++++|+++|++++++
T Consensus        78 d~vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~----l~~~~~~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~  152 (311)
T PRK08354         78 RKVIIPRHTYGEYERVARFFAARIIKGPNDPE-K----LEELVERNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNAL  152 (311)
T ss_pred             CeEEEeCCCcHHHHHHHHHcCCEEeecCCCHH-H----HHHhhcCCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcE
Confidence            67788877777 888889999 8887765432 1    222 23568899999999999999999999999999999999


Q ss_pred             EEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcch
Q 036024           81 IIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN  160 (272)
Q Consensus        81 vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (272)
                      +|+||+|.++.+++..  .     ..+++++++||||+||+||+|+||+++   .        .+.+.....  ....+.
T Consensus       153 li~De~y~~f~~~~~~--~-----~~~~vi~~~S~SK~~~l~GlRiG~~v~---~--------~~~l~~~~~--~~~~~~  212 (311)
T PRK08354        153 LILDEAFIDFVKKPES--P-----EGENIIKLRTFTKSYGLPGIRVGYVKG---F--------EEAFRSVRM--PWSIGS  212 (311)
T ss_pred             EEEeCcchhccccccc--c-----CCCcEEEEeccHhhcCCccceeeeeee---h--------HHHHHHcCC--CccCCH
Confidence            9999999998876421  1     156899999999999999999999998   3        344443332  233556


Q ss_pred             HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCC
Q 036024          161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS  240 (272)
Q Consensus       161 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~  240 (272)
                      ..+.++..++. ...+++.+.++.++++++.+.+.+      ...+ ++.|+++.++  ++.++...+. ++||.+.||.
T Consensus       213 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l------~~~~-~~~~~~~~~~--~~~~~~~~l~-~~gv~v~~g~  281 (311)
T PRK08354        213 TGYAFLEFLIE-DDFEHLRKTMPLIWREKERFEKAL------YVKS-DANFFIKDVG--DAEKFVEFLK-RNGILVRDCT  281 (311)
T ss_pred             HHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHhc------CCCC-CCcEEEEECC--CHHHHHHHHH-HCCeEEEecc
Confidence            66776666665 334555555566555555544443      1234 4566666664  4556666665 5599999999


Q ss_pred             CCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024          241 GFGPGGEEYIRISGFGHRESILEASRRLEA  270 (272)
Q Consensus       241 ~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~  270 (272)
                      .|+.  ++++|++++. +++.+++.+.|++
T Consensus       282 ~f~~--~~~iRi~~~~-~~~~~~l~~al~~  308 (311)
T PRK08354        282 SFGL--PGYIRFSVRD-REENEKLIRALRE  308 (311)
T ss_pred             cCCC--CCeEEEEeCC-HHHHHHHHHHHHH
Confidence            9964  5899999864 3344444555444

>PRK03321 putative aminotransferase; Provisional

Probab=100.00  E-value=7.8e-32  Score=230.83  Aligned_cols=245  Identities=24%  Similarity=0.333  Sum_probs=181.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      |.|++..|.+. |...++..| +++.+|++++.++.++ +++  .++++++++++||||||.+++.+++.++++.| +++
T Consensus        99 d~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~-~~~  177 (352)
T PRK03321         99 DEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAV-PAD  177 (352)
T ss_pred             CEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCC
Confidence            56666655443 667778888 9999999755444444 222  26789999999999999999988888887765 479


Q ss_pred             CEEEEcccCCccccCCCCC-CccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024           79 SIIIFDSAYAAYVTDGCPR-SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG  157 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (272)
                      +++|+||+|.++.+++... ++... ...+++++++||||.||+||+|+||+++++++        ++.+.+..  ...+
T Consensus       178 ~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~--------~~~~~~~~--~~~~  246 (352)
T PRK03321        178 VLVVLDEAYVEYVRDDDVPDGLELV-RDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEV--------IAALRKVA--VPFS  246 (352)
T ss_pred             eEEEEechHHHhccCcCCCcHHHHH-hhCCCEEEEecchHHhhhHHHhhhhhcCCHHH--------HHHHHHhc--CCCC
Confidence            9999999999888765332 22222 23468999999999999999999999998877        56665442  3445


Q ss_pred             cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024          158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV  237 (272)
Q Consensus       158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~  237 (272)
                      .+.++|.++.+++.. ...+ .+..+.+.++++.+.+.|...|+.+.++ +|+|+|+.++. ...++...+ +++||.+.
T Consensus       247 ~s~~~q~~a~~~l~~-~~~~-~~~~~~~~~~r~~~~~~L~~~~~~~~~~-~g~~i~i~l~~-~~~~~~~~l-~~~gI~v~  321 (352)
T PRK03321        247 VNSLAQAAAIASLAA-EDEL-LERVDAVVAERDRVRAALRAAGWTVPPS-QANFVWLPLGE-RTADFAAAA-AEAGVVVR  321 (352)
T ss_pred             CCHHHHHHHHHHhcC-HHHH-HHHHHHHHHHHHHHHHHHHHCCCccCCC-CCCEEEEeCCC-CHHHHHHHH-HHCCEEEE
Confidence            888999888888863 2233 4444555666788999999888876554 68999999863 455666665 56699998


Q ss_pred             CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          238 PGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +   |+   ..++|+++ .+.++.++++++|++++
T Consensus       322 ~---~~---~~~iRi~~-~~~~~~~~~~~al~~~~  349 (352)
T PRK03321        322 P---FA---GEGVRVTI-GAPEENDAFLRAARAWR  349 (352)
T ss_pred             c---cC---CCcEEEee-CCHHHHHHHHHHHHHHh
Confidence            6   43   34699997 57888899888888753

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=99.97  E-value=1.3e-30  Score=221.73  Aligned_cols=230  Identities=21%  Similarity=0.275  Sum_probs=167.6

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..|.+. |...++..| ++++++++.+  +.+|++.    .+++++++++|||||||.+++.+++.++   + ++
T Consensus        95 d~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~~~~~~~v~~~~P~NPtG~~~~~~~l~~i---~-~~  168 (337)
T PRK03967         95 KHIVITPPTFGMYSFYAKLNGIPVIDVPLKED--FTIDGERIAEKAKNASAVFICSPNNPTGNLQPEEEILKV---L-ET  168 (337)
T ss_pred             CeEEEeCCChHHHHHHHHHcCCeEEEeecCCC--CCcCHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHH---H-hc
Confidence            67788887776 667778888 9999998754  4455322    3678999999999999999997665555   4 36


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG  157 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (272)
                      ++++|+||+|.++...    +........+++++++||||.||+||+|+||+++++++        ++.+.+....  .+
T Consensus       169 ~~~ii~De~y~~~~~~----~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~--------i~~~~~~~~~--~~  234 (337)
T PRK03967        169 GKPVVLDEAYAEFSGK----SLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEI--------IDALYRIKPP--FS  234 (337)
T ss_pred             CCEEEEECchhhhccc----chHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHH--------HHHHHhhcCC--CC
Confidence            9999999999987522    11122223467999999999999999999999998877        5666655443  35


Q ss_pred             cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024          158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV  237 (272)
Q Consensus       158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~  237 (272)
                      .+.++|.++..++.+  .++..+.++.+.++++.+.+.|.+..    .+++++|+|+.++      +...|+++ ||.+.
T Consensus       235 ~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~~~~~~~~~------~~~~l~~~-gi~v~  301 (337)
T PRK03967        235 LNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEYA----YPSDANFLLLKLD------AYDYLLEN-GIVVR  301 (337)
T ss_pred             CCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccCc----CCCCCcEEEEhHH------HHHHHHHC-CEEEE
Confidence            788999999888863  33556666677778888888887642    3568999999874      45666655 99998


Q ss_pred             CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024          238 PGSGFGPGGEEYIRISGFGHRESILEASRRLEA  270 (272)
Q Consensus       238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~  270 (272)
                      ++..   ...+++|+++.. .++.+++++.|++
T Consensus       302 ~~~~---~~~~~~Ri~~~~-~~~~~~l~~~l~~  330 (337)
T PRK03967        302 KLSG---RLEGHIRVTVGK-REENDEFIKALKE  330 (337)
T ss_pred             eCCC---CCCCeEEEecCC-HHHHHHHHHHHHH
Confidence            7642   235799999854 4444455555443

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.97  E-value=2.1e-29  Score=215.26  Aligned_cols=258  Identities=28%  Similarity=0.491  Sum_probs=207.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCccc--C-CC--CCCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFP--D-LK--GTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~--d-l~--~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...++..| +++.++.++++.+..  + ++  ..++++++++++|+||||.+++.+++++|+++|++
T Consensus        84 ~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~  163 (350)
T cd00609          84 DEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKK  163 (350)
T ss_pred             CEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHh
Confidence            56667666666 888888888 999999987765554  1 22  23789999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +|+++|+|++|+.+.+.+............+.+++++|++|.++.+|.|+||+++++ ++        .+.+........
T Consensus       164 ~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~--------~~~~~~~~~~~~  235 (350)
T cd00609         164 HGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEEL--------LERLKKLLPYTT  235 (350)
T ss_pred             CCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHH--------HHHHHHHHHhcc
Confidence            999999999999877665433211222334567999999999988999999999988 55        566666666656


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-ecCCCceEEEeecCCCChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV-YGGINAPYVWAHFPGRKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi  234 (272)
                      .+++...+.++..++.... ++.++.+++++++++++.+.|.+.+... ..+..++++|+.++.....+.+.++++++||
T Consensus       236 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi  314 (350)
T cd00609         236 SGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGV  314 (350)
T ss_pred             cCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCE
Confidence            6788888998888888543 6778899999999999999999985543 4556789999999865566778888888899


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA  270 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~  270 (272)
                      .+.++..|...+..++|+++...++|+++++++|++
T Consensus       315 ~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~~  350 (350)
T cd00609         315 VVRPGSAFGEGGEGFVRLSFATPEEELEEALERLAE  350 (350)
T ss_pred             EEecccccccCCCCeEEEEeeCCHHHHHHHHHHhhC
Confidence            999988776556789999986669999999999863

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=99.96  E-value=4.4e-28  Score=188.01  Aligned_cols=253  Identities=19%  Similarity=0.259  Sum_probs=196.3

Q ss_pred             ccccccccCcccchHHhccc-c-eeEEeecCCCCCcccC-----CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            3 IDSSVIVGQAGDLEDEVGKY-C-NIEYLECGPGNNFFPD-----LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         3 ~d~~~~~~~~~~~~~~~~~~-g-~~~~~~~~~~~~~~~d-----l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      .|.+++.+|++.++...+.. + +++.+|++++.....|     ++....+|++++++|+||||..+..+++.+|.+.-.
T Consensus       111 keKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~  190 (375)
T KOG0633|consen  111 KEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPD  190 (375)
T ss_pred             ccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCC
Confidence            46788888998855555554 4 9999999987666665     333468999999999999999999999999998643


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                        |.++++||+|.+|...+   +-..+...+.|++++.++||.+|++|+|+||...+.+.        +..+.+.+.+..
T Consensus       191 --nglVVvDEAYidFsg~~---S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~i--------a~iln~~KaPYN  257 (375)
T KOG0633|consen  191 --NGLVVVDEAYIDFSGVE---SRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSI--------AEILNRAKAPYN  257 (375)
T ss_pred             --CcEEEEeeeeEeecccc---ccchHhHhCCceeehhhhhhhcCcceeEeecccccHHH--------HHHHHhccCCcc
Confidence              89999999999987533   23334445678899999999999999999998888877        666666665544


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecCCCceEEEeecCC---CChHHHHHHHHH
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGGINAPYVWAHFPG---RKSWDVFAEILE  230 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~i~l~~---~~~~~~~~~ll~  230 (272)
                        .+..+..++++++.+.....++..++.+-+.+.++-+.|.+. ++. +.++..++|+.+++.+   ..+..+..+++.
T Consensus       258 --iS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at  335 (375)
T KOG0633|consen  258 --ISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDAT  335 (375)
T ss_pred             --ccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHH
Confidence              777888888899987666788899999999999999999987 333 4566788999999973   344567777888


Q ss_pred             hcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          231 KTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       231 ~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +.|+.++--. -.+..+|++|++. .++|+-..+++.|++.+
T Consensus       336 ~~gVvVRfrg-se~~c~G~lRitv-Gt~EentvL~k~~K~~l  375 (375)
T KOG0633|consen  336 KMGVVVRFRG-SEEGCKGYLRITV-GTPEENTVLMKCLKQFL  375 (375)
T ss_pred             hcceEEEEcC-CccccceeEEEEc-CCcccchHHHHHHHhhC
Confidence            8899996311 1133589999997 46667777888888764

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.95  E-value=8.3e-26  Score=191.94  Aligned_cols=229  Identities=14%  Similarity=0.123  Sum_probs=168.2

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD   93 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~   93 (272)
                      |...++..| +++.. .+.+ .    ++..+++++|+++ ++||+|.+++.+++++|+++|+++++++++||+|..+..+
T Consensus       111 ~~~~~~l~ga~~~~~-~~l~-~----l~~~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~  183 (346)
T TIGR03576       111 IPRSCKLAGAEYFES-DELS-E----LKKIDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRR  183 (346)
T ss_pred             HHHHHHHcCCEEecc-CCHH-H----HhhCcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccc
Confidence            656666667 54322 1111 1    2233567887775 4689999999999999999999999999999999976533


Q ss_pred             CC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccc
Q 036024           94 GC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS  172 (272)
Q Consensus        94 ~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  172 (272)
                      .. ..+.....   .+ ++++|+||  +++|+|+||+++++++        ++.+.+.......+.+++.|.++.++++.
T Consensus       184 ~~~~~~~~~~~---~d-ivv~s~SK--alaG~r~G~v~~~~~l--------i~~l~~~~~~~~~s~~~~~~~aa~~aL~~  249 (346)
T TIGR03576       184 LYGQPPALDLG---AD-LVVTSTDK--LMDGPRGGLLAGRKEL--------VDKIKSVGEQFGLEAQAPLLAAVVRALEE  249 (346)
T ss_pred             cCCCCCHHHcC---Cc-EEEeccch--hccccceEEEEeCHHH--------HHHHHHhhcCcccCccHHHHHHHHHHHhh
Confidence            11 11222221   12 67889999  4588999999999987        67777766655555788889988888874


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEE
Q 036024          173 EGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRI  252 (272)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~  252 (272)
                      ..   .+.+++.++++.+.+.+.+++  +.+.++ .++|+|++++..++.+++.++++++||.++||+.|. ..++++|+
T Consensus       250 ~~---~~~~~~~l~~r~~~~~~~l~~--~~~~~~-~~~f~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~-~~~~~vRi  322 (346)
T TIGR03576       250 FE---LSRIRDAFKRKEEVYLRLFDK--LNVERT-PTGFVIKGVEEEKLIEIGLDLLRNYGIITITAVGMP-GASKTLRF  322 (346)
T ss_pred             cc---HHHHHHHHHHHHHHHHHHHHh--CCCCcC-CCeEEEEeCCCCCHHHHHHHHHHhCCEEEeCCcccC-CCCCeEEE
Confidence            32   256778999999999888884  445443 455899999754456788899999999999998883 34679999


Q ss_pred             EccCCHH---HHHHHHHHHHHh
Q 036024          253 SGFGHRE---SILEASRRLEAL  271 (272)
Q Consensus       253 s~~~~~~---~i~~~l~~l~~~  271 (272)
                      +++.+++   +++.+++.|++-
T Consensus       323 s~~~~~~~~~~~~~~~~al~~~  344 (346)
T TIGR03576       323 DLAAKDAERIGDDYLVEAVKDS  344 (346)
T ss_pred             EEecChHHhcCHHHHHHHHHhc
Confidence            9977665   799999998864

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.94  E-value=2.1e-25  Score=176.46  Aligned_cols=216  Identities=23%  Similarity=0.308  Sum_probs=166.5

Q ss_pred             CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccC-CCCCceEEEecCccccCC
Q 036024           43 TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIP-GAREVAIEISSFSKFSGF  121 (272)
Q Consensus        43 ~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~  121 (272)
                      .+++.+|+++-|.||||.+++.+++.+|-++|+.||+.+++|.+|+. .+.+-  -+.+.. --.+|++.+.|+|| .|+
T Consensus       177 ~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~-PFP~i--ifsd~~~~w~~NiilC~SLSK-~GL  252 (417)
T COG3977         177 GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV-PFPGI--IFSDATPLWNENIILCMSLSK-LGL  252 (417)
T ss_pred             ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC-CCCce--ecccccccCCCCEEEEeehhh-cCC
Confidence            37899999999999999999999999999999999999999999984 11211  111110 12368899999999 568


Q ss_pred             CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHHH-HHHHHHHHHHHHHHHH--
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHSV-VDYYKENTKILIDTLA--  197 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~-~~~~~~~~~~l~~~L~--  197 (272)
                      ||.|+|.+++++++        +..+.+.....+..++..+++.+..+++.... +..++. +-.|+.+.+...+.|+  
T Consensus       253 PG~R~GIiIane~v--------iqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~  324 (417)
T COG3977         253 PGSRCGIIIANEKV--------IQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRY  324 (417)
T ss_pred             CCcceeEEEccHHH--------HHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence            99999999999998        66777777777777888899989999885444 222332 2355555555555554  


Q ss_pred             --hCCCeEecCCCceEEEeecC--CCChHHHHHHHHHhcCeEeeCCCCCCCC-------CCCeEEEEccCCHHHHHHHHH
Q 036024          198 --SLGIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKTHITTVPGSGFGPG-------GEEYIRISGFGHRESILEASR  266 (272)
Q Consensus       198 --~~g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~-------~~~~~R~s~~~~~~~i~~~l~  266 (272)
                        +..+.+..|+++.|+|+.+.  ...+.++.++|- ..|+.+.||+.|.++       ...++|+++..++++++.+++
T Consensus       325 lp~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LK-a~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva  403 (417)
T COG3977         325 LPEYRCLIHKPEGAIFLWLWFKDLPITTEELYQRLK-ARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVA  403 (417)
T ss_pred             cCccceeeecCCcceeehhhhccCCCCHHHHHHHHH-hCeEEEecccccCCCCCCCCCCccceEEEecCCCHHHHHHHHH
Confidence              44788899999999999997  456667666655 449999999999743       367899999888999999999


Q ss_pred             HHHHh
Q 036024          267 RLEAL  271 (272)
Q Consensus       267 ~l~~~  271 (272)
                      +|.+.
T Consensus       404 ~lae~  408 (417)
T COG3977         404 ILAEE  408 (417)
T ss_pred             HHHHH
Confidence            88764

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.94  E-value=4.2e-25  Score=192.47  Aligned_cols=252  Identities=18%  Similarity=0.175  Sum_probs=173.6

Q ss_pred             cccccccCcc-----cchHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAG-----DLEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~-----~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..+..     .|...++..| +++.++.+.+  +.+|++.     .++++++++++|+||||.+++   +++|++
T Consensus       110 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~---~~~i~~  184 (401)
T PRK10874        110 DEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGAD--RLPDVDLLPELITPRTRILALGQMSNVTGGCPD---LARAIT  184 (401)
T ss_pred             CEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCC--CcCCHHHHHHhcCcCcEEEEEeCCcccccCcCC---HHHHHH
Confidence            5667766543     2455667788 9999998754  3444332     378999999999999999987   789999


Q ss_pred             HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHH-------
Q 036024           73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN-------  145 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~-------  145 (272)
                      +|+++|+++++|++|.....   +..+..+.    ..+++.|++|.+|.+|  +|+++++++.+....+. ..       
T Consensus       185 l~~~~g~~~ivD~a~~~g~~---~~~~~~~~----~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~-~~~~~~~~~  254 (401)
T PRK10874        185 LAHQAGMVVMVDGAQGAVHF---PADVQALD----IDFYAFSGHKLYGPTG--IGVLYGKSELLEAMSPW-QGGGKMLTE  254 (401)
T ss_pred             HHHHcCCEEEEECCcccccc---cCCchhcC----CCEEEEecccccCCCc--cEEEEEchHHHhcCCCe-ecCCcceEe
Confidence            99999999999999964222   22222221    2388899999998777  69999888764321110 00       


Q ss_pred             -HHH------hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC
Q 036024          146 -DFN------RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP  217 (272)
Q Consensus       146 -~~~------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~  217 (272)
                       .+.      ........+++...+.++.+++.........+..++.++.++++++.|+++ |+.+..+..+.++++.++
T Consensus       255 ~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~  334 (401)
T PRK10874        255 VSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFA  334 (401)
T ss_pred             eccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEEC
Confidence             000      000111223555555555555542222334567788889999999999987 888877666777777887


Q ss_pred             CCChHHHHHHHHHhcCeEeeCCCCCCC------CCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          218 GRKSWDVFAEILEKTHITTVPGSGFGP------GGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       218 ~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      +.+..++...| +++||.+.+|..|..      +..+++|+|+  +++++|++++++.|+++
T Consensus       335 ~~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~  395 (401)
T PRK10874        335 GVHHSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRA  395 (401)
T ss_pred             CcCHHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHH
Confidence            66666666555 556999999987742      2257999996  56999999999999875

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.93  E-value=1.3e-24  Score=189.15  Aligned_cols=254  Identities=17%  Similarity=0.112  Sum_probs=172.1

Q ss_pred             cccccccCcc-----cchHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAG-----DLEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~-----~~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.+     .|...++..| +++.+|.+.+....++ +++  .++++++++++|+||||.+++   +++|+++|
T Consensus       107 d~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~---~~~i~~~~  183 (398)
T TIGR03392       107 DEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPD---LARAITLA  183 (398)
T ss_pred             CEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccCceEEEEECccccccccCC---HHHHHHHH
Confidence            5667666543     2445667788 9999999755333333 322  268999999999999999987   78899999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH------
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN------  148 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~------  148 (272)
                      +++|+++++|++|+....   +..+..+.    ..+++.|.+|.+|.+|  +||++.+++.+....+ ......      
T Consensus       184 ~~~~~~~ivD~a~~~~~~---~~~~~~~~----~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~-~~~~~~~~~~~~  253 (398)
T TIGR03392       184 HQYGAVVVVDGAQGVVHG---PPDVQALD----IDFYAFSGHKLYGPTG--IGVLYGKTELLEAMPP-WQGGGKMLSHVS  253 (398)
T ss_pred             HHcCCEEEEEhhhhcCCC---CCChhhcC----CCEEEEecccccCCCc--eEEEEEcHHHHhhCCC-eecCCceEeecc
Confidence            999999999999974322   22222221    2278889999988666  8999998877432111 000000      


Q ss_pred             --h------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC
Q 036024          149 --R------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR  219 (272)
Q Consensus       149 --~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~  219 (272)
                        .      .......+++.....++.+.++.......++..++.++.++++++.|+++ |+.+.++..+.++++.+++.
T Consensus       254 ~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~  333 (398)
T TIGR03392       254 FDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGV  333 (398)
T ss_pred             ccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCc
Confidence              0      00111123444455555555442222234677788899999999999987 88887655667777788766


Q ss_pred             ChHHHHHHHHHhcCeEeeCCCCCCC------CCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          220 KSWDVFAEILEKTHITTVPGSGFGP------GGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       220 ~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      ...++...| +++||.+.+|..|..      +..+++|+|+  ++|++|++++++.|+++
T Consensus       334 ~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~  392 (398)
T TIGR03392       334 HHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAA  392 (398)
T ss_pred             CHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHH
Confidence            666766665 556999999987742      2257899996  67999999999999875

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.93  E-value=6e-25  Score=188.76  Aligned_cols=248  Identities=19%  Similarity=0.117  Sum_probs=169.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC--CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT--SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~--~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      |.|++.++++. +...+...| +++.++...-..+.-.++..  ++++++++.+++||||...+   +++|.++|+++++
T Consensus       101 d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~  177 (360)
T TIGR00858       101 DLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP---LPQLVALAERYGA  177 (360)
T ss_pred             CEEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC---HHHHHHHHHHcCc
Confidence            56666666555 666667777 87777642110111001111  35678888899999998866   8999999999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCC--CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh--cc
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPG--AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT--CF  155 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  155 (272)
                      ++|+||+|..+.++....+.....+  ..+++++++|+||.+|.+|   ||++++++.        .+.+......  ..
T Consensus       178 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~~~~--------~~~~~~~~~~~~~~  246 (360)
T TIGR00858       178 WLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGSQAL--------IDYLINRARTLIFS  246 (360)
T ss_pred             EEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcCHHH--------HHHHHHhCccceec
Confidence            9999999986655443233222211  1357899999999999766   999988776        4444433222  12


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi  234 (272)
                      .+.+...+.++.++++..  .+.++.+++++++++++.+.|+++++++.+ ..++++|+.++. .+..++...|++ +||
T Consensus       247 ~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~-~gI  322 (360)
T TIGR00858       247 TALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEALGFTLMP-SCTPIVPVIIGDNASALALAEELQQ-QGI  322 (360)
T ss_pred             CCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHcCCccCC-CCCCEEEEEeCCHHHHHHHHHHHHH-CCe
Confidence            224444444555555421  123567899999999999999998887765 468899999874 234566666655 599


Q ss_pred             EeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHH
Q 036024          235 TTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLE  269 (272)
Q Consensus       235 ~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~  269 (272)
                      .+.++..++ +.+.+++|+++.  ++++++++++++|+
T Consensus       323 ~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~  360 (360)
T TIGR00858       323 FVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK  360 (360)
T ss_pred             eEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence            999876654 234568999974  59999999999874

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.93  E-value=1e-24  Score=190.40  Aligned_cols=240  Identities=17%  Similarity=0.167  Sum_probs=162.1

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV   91 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~   91 (272)
                      +...+...| ++..++.+......-.++.  .+++++|++++|+||||.+++   +++|.++|+++++++|+||+|....
T Consensus       145 ~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~  221 (410)
T PRK13392        145 MIEGIRRSGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGL  221 (410)
T ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccC
Confidence            434455566 6655543211111111222  257899999999999999988   8899999999999999999999544


Q ss_pred             cCCCCCCccccCCCCCc-eEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh--ccCCcchHHHHHHHH
Q 036024           92 TDGCPRSIYEIPGAREV-AIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT--CFNGASNIAQAGGLA  168 (272)
Q Consensus        92 ~~~~~~~~~~~~~~~~~-~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~  168 (272)
                      +++....+....+..++ .++++|+||.+|.+|   ||++++++.        ++.+.+....  .+...+++.+.++.+
T Consensus       222 ~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~~~--------~~~l~~~~~~~~~s~~~~~~~~~a~~a  290 (410)
T PRK13392        222 YGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASADL--------IDFVRSFAPGFIFTTALPPAVAAGATA  290 (410)
T ss_pred             cCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCHHH--------HHHHHHhCcchhccCcCCHHHHHHHHH
Confidence            44332333222222222 388899999999888   999887776        4555444332  222345566777777


Q ss_pred             hcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCC-CCC
Q 036024          169 CLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFG-PGG  246 (272)
Q Consensus       169 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~-~~~  246 (272)
                      +++...  .....+++++++++++++.|+++|+++.++ .+.++.+.++.. ...++..+|++++||.+.++.... +.+
T Consensus       291 aL~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~  367 (410)
T PRK13392        291 AIRHLK--TSQTERDAHQDRVAALKAKLNANGIPVMPS-PSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRG  367 (410)
T ss_pred             HHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCCC-CCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCC
Confidence            776322  123456889999999999999999887765 455555555421 234677778777799999875443 335


Q ss_pred             CCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          247 EEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       247 ~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      ..++|+++  ..+++|+++++++|+++
T Consensus       368 ~~~lRis~~~~~t~edid~l~~aL~~~  394 (410)
T PRK13392        368 TERLRITPTPLHDDEDIDALVAALVAI  394 (410)
T ss_pred             CceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            67899997  46999999999999875

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=99.93  E-value=1.4e-24  Score=177.18  Aligned_cols=258  Identities=19%  Similarity=0.207  Sum_probs=188.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC----------CCceEEEEecCCCccccCCCHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT----------SRTDIIFFCSPNNPTGHAATQNQLEQLV   71 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~----------~~~~~i~~~~p~nptG~~~~~~~l~~l~   71 (272)
                      |.|+++-|.++ |...++.+| ..+++=++++.+|.+|.+++          -++|+++++||.||||++++.+.+++|+
T Consensus       162 ~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~  241 (475)
T KOG0258|consen  162 TGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGII  241 (475)
T ss_pred             CceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHH
Confidence            45666555555 888888888 99999999999999995552          4789999999999999999999999999


Q ss_pred             HHHHHcCCEEEEcccCCccccCCC--CCCc----cccCCC-CC--ceEEEecCcccc-CCCccceeEEEecccccccCCc
Q 036024           72 EFARNNGSIIIFDSAYAAYVTDGC--PRSI----YEIPGA-RE--VAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGF  141 (272)
Q Consensus        72 ~~~~~~~~~vi~D~~~~~~~~~~~--~~~~----~~~~~~-~~--~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~  141 (272)
                      .+|.+++++++.||+|++.+|.+.  ..+.    .++... ++  .++..+|.||.+ |-.|.|-||+-.-+-.     +
T Consensus       242 ~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~-----p  316 (475)
T KOG0258|consen  242 CFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRD-----P  316 (475)
T ss_pred             HHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCC-----h
Confidence            999999999999999999888763  2232    223211 22  347778889966 5578999997663322     0


Q ss_pred             chHHHHHhhhhhccCCcchHHHHHHHHhccc-----ccH----HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceE
Q 036024          142 PVINDFNRIICTCFNGASNIAQAGGLACLSS-----EGL----EAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPY  211 (272)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-----~~~----~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~  211 (272)
                      +..+++.+....... ++..+|...-.....     ...    ..-......++++++.+.+.++.+ |+.+..++++++
T Consensus       317 rv~~qi~Kl~si~lc-~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY  395 (475)
T KOG0258|consen  317 RVKQQIKKLASIKLC-PQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMY  395 (475)
T ss_pred             hHHHHHHHHHhhhhc-CCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCcccee
Confidence            113344333333332 666666655555541     111    345667788999999999999998 999999999999


Q ss_pred             EEeecC--C-----------CChHHHHHHHHHhcCeEeeCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024          212 VWAHFP--G-----------RKSWDVFAEILEKTHITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLEA  270 (272)
Q Consensus       212 ~~i~l~--~-----------~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~  270 (272)
                      .+..+.  .           ..+.-.+.+||+.+||+++||+.||. +|.=|+|.++-...  + +.++++++
T Consensus       396 ~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~  465 (475)
T KOG0258|consen  396 LFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKK  465 (475)
T ss_pred             ecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHH
Confidence            887763  1           35566889999999999999999994 56778999974433  3 55555554

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.93  E-value=1.8e-24  Score=189.67  Aligned_cols=250  Identities=17%  Similarity=0.122  Sum_probs=172.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCC------CCcc--cCCCCC---------CCceEEEEecCCCccc-cCCC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPG------NNFF--PDLKGT---------SRTDIIFFCSPNNPTG-HAAT   63 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~------~~~~--~dl~~~---------~~~~~i~~~~p~nptG-~~~~   63 (272)
                      | |++.+|++. |.......| +++.+++++.      ++|.  +|++++         +++++|++++|+|||| ++++
T Consensus       118 D-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s  196 (460)
T PRK13238        118 D-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVS  196 (460)
T ss_pred             C-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCC
Confidence            5 666666554 777778888 9999998742      3454  664431         3689999999999998 9999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccCCc--cccCC------CCCCccccCCCCCceEEEecCccccCCCccce------eEE
Q 036024           64 QNQLEQLVEFARNNGSIIIFDSAYAA--YVTDG------CPRSIYEIPGAREVAIEISSFSKFSGFTGVRL------GWT  129 (272)
Q Consensus        64 ~~~l~~l~~~~~~~~~~vi~D~~~~~--~~~~~------~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~------G~~  129 (272)
                      .+++++|.++|++||+++|+|+++..  ..+..      ...++.++      +..++|++|.+.++|+|.      |++
T Consensus       197 ~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i------~~~~~s~~D~~~~Sg~K~g~~~~GG~i  270 (460)
T PRK13238        197 MANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI------AREMFSYADGLTMSAKKDAMVNIGGLL  270 (460)
T ss_pred             HHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH------hhhhcccCcEEEEecccCCCCcceeEE
Confidence            99999999999999999999997742  22221      12333222      123345555554445543      455


Q ss_pred             EecccccccCCcchHHHHHhhh----hh-ccCCcchHHHHHHHHhcccc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Q 036024          130 VVPEELLFSSGFPVINDFNRII----CT-CFNGASNIAQAGGLACLSSE-GLEAVHSVVDYYKENTKILIDTLASLGIKV  203 (272)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~  203 (272)
                      +++++.+       ...+....    .. +..+.+...|.|++..+.+. ..++...+    .+++++|.+.|.+.|+.+
T Consensus       271 ~~~d~~l-------~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~----~~~~~~l~~~L~~~G~~~  339 (460)
T PRK13238        271 CFRDEDL-------FTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYR----IGQVEYLGEGLEEAGVPI  339 (460)
T ss_pred             EcChHHH-------HHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHH----HHHHHHHHHHHHHCCCCe
Confidence            6564331       44444432    11 23333445577777666532 22222332    336799999999999999


Q ss_pred             ecCCCceEEEeecCCC---------ChHHHHHHHHHhcCeEeeCCCCCCCCC-----------CCeEEEEccC---CHHH
Q 036024          204 YGGINAPYVWAHFPGR---------KSWDVFAEILEKTHITTVPGSGFGPGG-----------EEYIRISGFG---HRES  260 (272)
Q Consensus       204 ~~~~~~~~~~i~l~~~---------~~~~~~~~ll~~~gi~v~~g~~~~~~~-----------~~~~R~s~~~---~~~~  260 (272)
                      ..|.+|+++++++...         .+.+++.+|++++||.+.|++.|....           ...+|+++..   +.++
T Consensus       340 ~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~  419 (460)
T PRK13238        340 QTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSH  419 (460)
T ss_pred             EccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHH
Confidence            9999999999998632         357799999999999999999886321           4789999866   8899


Q ss_pred             HHHHHHHHHHh
Q 036024          261 ILEASRRLEAL  271 (272)
Q Consensus       261 i~~~l~~l~~~  271 (272)
                      ++.+.++|+.+
T Consensus       420 ~~~~~~~l~~~  430 (460)
T PRK13238        420 MDYVAEALKAV  430 (460)
T ss_pred             HHHHHHHHHHH
Confidence            99988888764

>PLN02822 serine palmitoyltransferase

Probab=99.93  E-value=2.6e-24  Score=190.19  Aligned_cols=238  Identities=16%  Similarity=0.176  Sum_probs=172.3

Q ss_pred             Hhcccc-eeEEeecCCCCCcccCCCCC-------CCc-eEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024           18 EVGKYC-NIEYLECGPGNNFFPDLKGT-------SRT-DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA   88 (272)
Q Consensus        18 ~~~~~g-~~~~~~~~~~~~~~~dl~~~-------~~~-~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~   88 (272)
                      .+...+ +++.++.++..++..++++.       +++ ++|++..++|+||.+.+   +++|+++|++||+++|+||+|+
T Consensus       209 ~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s  285 (481)
T PLN02822        209 GLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNS  285 (481)
T ss_pred             HHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCcc
Confidence            334445 88888877655666555431       335 57777788999999998   8999999999999999999999


Q ss_pred             ccccCCCCCCccccCCC--CCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc--chHHHH
Q 036024           89 AYVTDGCPRSIYEIPGA--REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA--SNIAQA  164 (272)
Q Consensus        89 ~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  164 (272)
                      ...++..+..+.+..+.  .+..++++||||++|.+|   ||++++++.        ++.+........++.  ++..+.
T Consensus       286 ~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~~i--------i~~~~~~~~~~~fsa~lPp~~~~  354 (481)
T PLN02822        286 FGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSARV--------VDHQRLSSSGYVFSASLPPYLAS  354 (481)
T ss_pred             ccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCHHH--------HHHHHhcCCceeeccccCHHHHH
Confidence            76666443333333222  244588999999999888   999998887        455543333333333  355667


Q ss_pred             HHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC------C---hHHHHHHHHHhcCe
Q 036024          165 GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR------K---SWDVFAEILEKTHI  234 (272)
Q Consensus       165 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~------~---~~~~~~~ll~~~gi  234 (272)
                      |+.++++.. .. ..+++++++++.+++++.|++. |+.+..+.+++++++.+++.      +   ..+++.+|++++||
T Consensus       355 Aa~~aL~~l-~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV  432 (481)
T PLN02822        355 AAITAIDVL-ED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSV  432 (481)
T ss_pred             HHHHHHHHH-Hh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCE
Confidence            776776522 12 2578899999999999999987 88888777899999999642      1   25678888877799


Q ss_pred             EeeCCC--CCCCC-CCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          235 TTVPGS--GFGPG-GEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       235 ~v~~g~--~~~~~-~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      .+.|+.  .|+.. .+.++|++++  .+++++++++++|+++
T Consensus       433 ~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~  474 (481)
T PLN02822        433 LVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRV  474 (481)
T ss_pred             EEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            999773  33221 2457999864  6999999999999875

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.93  E-value=5.2e-24  Score=174.88  Aligned_cols=257  Identities=14%  Similarity=0.170  Sum_probs=175.2

Q ss_pred             cccccccCcccchHHh---cccc-eeEEeecCCCCCcccC-C----CCCCCceEEEEe-cCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGDLEDEV---GKYC-NIEYLECGPGNNFFPD-L----KGTSRTDIIFFC-SPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~~~~~~---~~~g-~~~~~~~~~~~~~~~d-l----~~~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~   73 (272)
                      +.|-++.|.|+|.+++   +.+| +.++||+.++ |...| +    .+.+.+|.|+++ ..+||||.++|.+..++|+++
T Consensus       123 ~~vKfLCPvPGYDRHFai~E~~Giemi~VpM~~d-GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m  201 (425)
T PF12897_consen  123 EKVKFLCPVPGYDRHFAITEHFGIEMIPVPMTED-GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAM  201 (425)
T ss_dssp             S--EEEEEES--HHHHHHHHHCT-EEEEEEEETT-EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS
T ss_pred             cCceEEecCCCchHHHHHHHhhCcEEEecCCCCC-CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcC
Confidence            5688899999998776   6699 9999999988 65555 2    234889999998 779999999999999999998


Q ss_pred             -HHHcCCEEEEcccCCcccc-CCCC-C---Ccc---ccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchH
Q 036024           74 -ARNNGSIIIFDSAYAAYVT-DGCP-R---SIY---EIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI  144 (272)
Q Consensus        74 -~~~~~~~vi~D~~~~~~~~-~~~~-~---~~~---~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~  144 (272)
                       +...+..|+.|++|..... +..+ .   .+.   .-.+.+++++...|.||.. +||..++++.++++.        +
T Consensus       202 ~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~N--------l  272 (425)
T PF12897_consen  202 KTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAASEAN--------L  272 (425)
T ss_dssp             --SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHH--------H
T ss_pred             CcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecCHHH--------H
Confidence             3457999999999985444 2211 1   222   2256789999999999988 599999999999999        7


Q ss_pred             HHHHhhhhhccCCcchHHHHHHHHhccccc---HHHHHHHHHHHHHHHHHHHHHHHhC-C-----CeEecCCCceEEEee
Q 036024          145 NDFNRIICTCFNGASNIAQAGGLACLSSEG---LEAVHSVVDYYKENTKILIDTLASL-G-----IKVYGGINAPYVWAH  215 (272)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g-----~~~~~~~~~~~~~i~  215 (272)
                      +.+.+.....+.++..+.|..-.+++.+..   ..|+++.++.++-+.+.+.+.|++. |     .++..|.+|+|++++
T Consensus       273 ~~~~~~~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld  352 (425)
T PF12897_consen  273 AWIKKHLSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLD  352 (425)
T ss_dssp             HHHHHHHHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEE
T ss_pred             HHHHHHhcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEe
Confidence            888888888888999999999999998643   2788888888888888888877653 3     478889999999999


Q ss_pred             cCCCChHHHHHHHHHhcCeEeeC-CCCCCC---CCCCeEEEEc-cCCHHHHHHHHHHHHHh
Q 036024          216 FPGRKSWDVFAEILEKTHITTVP-GSGFGP---GGEEYIRISG-FGHRESILEASRRLEAL  271 (272)
Q Consensus       216 l~~~~~~~~~~~ll~~~gi~v~~-g~~~~~---~~~~~~R~s~-~~~~~~i~~~l~~l~~~  271 (272)
                      ... .......+++++.||.+.| |+.|..   .....+|++- +.+.||++.+++.+..+
T Consensus       353 ~~~-G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~c  412 (425)
T PF12897_consen  353 VLD-GTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATC  412 (425)
T ss_dssp             EST-T-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHH
T ss_pred             cCC-ChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHH
Confidence            986 3456677788999999999 655531   1357899996 56899999999887643

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.92  E-value=6.4e-24  Score=173.96  Aligned_cols=250  Identities=20%  Similarity=0.216  Sum_probs=196.1

Q ss_pred             cccccCccc-chHHhcccc-eeEEeecCCCCCcccC-------CCCCCCceEEEEe-cCCCccccCCCHHHHHHHHHHHH
Q 036024            6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-------LKGTSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-------l~~~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |-+.+|+|+ ....+...| ++..+|.=...+-.+|       ++..+...++++. ..|||||..++.+++++|+++.+
T Consensus       123 vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~  202 (396)
T COG1448         123 VWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIK  202 (396)
T ss_pred             EEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHH
Confidence            668889999 788999999 9988887654444455       3445777788887 55999999999999999999999


Q ss_pred             HcCCEEEEcccCCccccCCC--CCCccccCCCCCceEEEecCccccCCCccceeEEEe--cccccccCCcchHHHHHhhh
Q 036024           76 NNGSIIIFDSAYAAYVTDGC--PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV--PEELLFSSGFPVINDFNRII  151 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~~~~~~~~~~~~~~~~~~~~  151 (272)
                      +.+.+.+.|-+|++|..+-.  ...+.-+......+++..|+||.||+-|.|+|.+..  .++.   ...+..+++....
T Consensus       203 ~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~---~a~~v~sqlk~~i  279 (396)
T COG1448         203 ERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAE---EADRVLSQLKAII  279 (396)
T ss_pred             HcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHH---HHHHHHHHHHHHH
Confidence            99999999999998876532  222222222222379999999999999999999544  3322   2334466777777


Q ss_pred             hhccCCcchHHHHHHHHhcccccH-----HHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCCceEEEeecCCCChH
Q 036024          152 CTCFNGASNIAQAGGLACLSSEGL-----EAVHSVVDYYKENTKILIDTLASL----GIKVYGGINAPYVWAHFPGRKSW  222 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~i~l~~~~~~  222 (272)
                      ....++++..+..++..+|.++..     .++..+++++.+++..|.+.|...    .+.+...+.|+|.+..+    +.
T Consensus       280 R~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gl----s~  355 (396)
T COG1448         280 RTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGL----SP  355 (396)
T ss_pred             HhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCC----CH
Confidence            788888999999999999986543     578999999999999999999985    47888888999988754    34


Q ss_pred             HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      +.+.+|.+++||++..+        +  |+|++. ++.+++.+.+.|.+++
T Consensus       356 ~QV~rLree~~IY~v~s--------G--Ri~vaGl~~~ni~~va~ai~~v~  396 (396)
T COG1448         356 EQVDRLREEFGIYLVAS--------G--RINVAGLNTSNIDYVAKAIAAVL  396 (396)
T ss_pred             HHHHHHHHhccEEEecC--------C--eeeeccCChhhHHHHHHHHHhhC
Confidence            77899999999999742        3  899754 8999999999998764

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.92  E-value=2.8e-23  Score=178.92  Aligned_cols=239  Identities=16%  Similarity=0.151  Sum_probs=156.8

Q ss_pred             ccccccc-C-cccchHHhcccc-eeEEeecCCCCCcccCCCC----C--------CCceEEEEecCCCccccCCCHHHHH
Q 036024            4 DSSVIVG-Q-AGDLEDEVGKYC-NIEYLECGPGNNFFPDLKG----T--------SRTDIIFFCSPNNPTGHAATQNQLE   68 (272)
Q Consensus         4 d~~~~~~-~-~~~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~--------~~~~~i~~~~p~nptG~~~~~~~l~   68 (272)
                      |.|++.. + ++.| ..++..| +++.+|.+.+.++.+|++.    +        +++++|++++|+||||...+   ++
T Consensus        91 d~Vl~~~~~h~s~~-~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~  166 (370)
T TIGR02539        91 DWVVLDGLAHYTSY-VAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AG  166 (370)
T ss_pred             CEEEECCcccHHHH-HHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HH
Confidence            5556532 2 3335 4567778 9999998765556666443    1        26789999999999999876   88


Q ss_pred             HHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024           69 QLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN  148 (272)
Q Consensus        69 ~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~  148 (272)
                      +|+++|+++|+++|+|++|.....   +......    +..++++|+||+++ +|.|+||+++++++        ++.+.
T Consensus       167 ~i~~la~~~~~~livDea~~~g~~---~~~~~~~----~~di~v~s~sK~~~-~~g~~G~l~~~~~~--------i~~l~  230 (370)
T TIGR02539       167 KVAKVCREKGVPLLLNCAYTVGRM---PVSAKEI----GADFIVGSGHKSMA-ASGPCGVLGMSEEW--------EDIVL  230 (370)
T ss_pred             HHHHHHHHcCCeEEEECccccCCc---CCCHHHc----CCCEEEeeCccccc-CCCCEEEEEECHHH--------Hhhhc
Confidence            899999999999999999986321   1122222    12377899999998 67789999999887        34443


Q ss_pred             hhhhhcc--------CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEe--cCCCceEEEeecCC
Q 036024          149 RIICTCF--------NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY--GGINAPYVWAHFPG  218 (272)
Q Consensus       149 ~~~~~~~--------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~i~l~~  218 (272)
                      .......        .+....++.++.+.+.. ..+++++..+. .++++++++.|+++|+++.  .+..++|+++.++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~l~~~~~~-~~~~~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~  308 (370)
T TIGR02539       231 RKSRYSPVKEVELLGCTSRGAPIVTMMASFPH-VVERVKRWDEE-VKKTRWFVAELEDIGFIQLGQKPKEHDLVKFETPG  308 (370)
T ss_pred             ccccCCccceeeeecccccccHHHHHHHHHHH-HHHHHHHHHHH-HHHHHHHHHHHHhCCcEEEccCCCcCceEEEECCc
Confidence            3322110        11111233334444431 12333444344 4445689999999999874  35578899888763


Q ss_pred             C---------ChHHHHHHHHHhcCeE-eeCCCCCCCCCCCeEEEEc-cCCHHHHHHHHHHHHHh
Q 036024          219 R---------KSWDVFAEILEKTHIT-TVPGSGFGPGGEEYIRISG-FGHRESILEASRRLEAL  271 (272)
Q Consensus       219 ~---------~~~~~~~~ll~~~gi~-v~~g~~~~~~~~~~~R~s~-~~~~~~i~~~l~~l~~~  271 (272)
                      .         ....+...| +++||. +.++      ..+++|+++ ..+++|+++++++|+++
T Consensus       309 ~~~~~~~~~~~~~~~~~~L-~e~GI~~ir~~------~~~~iRis~~~~t~e~i~~l~~~L~~~  365 (370)
T TIGR02539       309 FHEIAQKHKRRGYFLYEEL-KKRGIHGIRSG------QTKYFKLSVYGLTKEQVEYVVDSFEEI  365 (370)
T ss_pred             hhHHhhhhccccHHHHHHH-HhCCCccccCC------cceEEEEEecCCCHHHHHHHHHHHHHH
Confidence            2         122345555 455997 5432      246899995 45999999999999875

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.92  E-value=3.1e-23  Score=180.95  Aligned_cols=254  Identities=17%  Similarity=0.196  Sum_probs=172.5

Q ss_pred             cccccccCc-----ccchHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQA-----GDLEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~-----~~~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.     ..|...++..| +++.+++++++...++ +++  .++++++++++|+||||.+++   +++|+++|
T Consensus       114 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~---~~~i~~~~  190 (406)
T PRK09295        114 DNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENP---LAEMIALA  190 (406)
T ss_pred             CEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCC---HHHHHHHH
Confidence            456665532     12555666778 9999998755333333 322  268999999999999999988   78899999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHH--------
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND--------  146 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~--------  146 (272)
                      +++++++++|++|....   .+..+..+.    ..+++.|++|.+|.+|  +||++++++.+... +.....        
T Consensus       191 ~~~~~~vivD~a~~~g~---~~~~~~~~~----~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~-~~~~~g~~~~~~~~  260 (406)
T PRK09295        191 HQHGAKVLVDGAQAVMH---HPVDVQALD----CDFYVFSGHKLYGPTG--IGILYVKEALLQEM-PPWEGGGSMIATVS  260 (406)
T ss_pred             HHcCCEEEEEcccccCc---cccCchhcC----CCEEEeehhhccCCCC--cEEEEEchHhHhhC-CCcccCCceeeeee
Confidence            99999999999997532   122332221    2288899999888666  79999988764221 100000        


Q ss_pred             HHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC-CceEEEeecC
Q 036024          147 FNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI-NAPYVWAHFP  217 (272)
Q Consensus       147 ~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~i~l~  217 (272)
                      ...       .......+++..+..++.++++.......++..++.++.++++++.|+++ |+++.++. .+.++.+.++
T Consensus       261 ~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~  340 (406)
T PRK09295        261 LTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLG  340 (406)
T ss_pred             cCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEEC
Confidence            000       01112234666666666666653333345778889999999999999887 78887753 2456666777


Q ss_pred             CCChHHHHHHHHHhcCeEeeCCCCCCC------CCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          218 GRKSWDVFAEILEKTHITTVPGSGFGP------GGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       218 ~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      +....++.. .++++||.+..|+.|..      ..++.+|+|+  ++|++|+++++++|+++
T Consensus       341 ~~~~~~~~~-~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i  401 (406)
T PRK09295        341 KHHAYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRI  401 (406)
T ss_pred             CcCHHHHHH-HHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Confidence            656666555 45677999999987752      1246799995  67999999999999764

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.92  E-value=1.2e-23  Score=182.15  Aligned_cols=205  Identities=19%  Similarity=0.174  Sum_probs=147.7

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++++++++.++||+|.. ++.+++++|.++|+++++++|+||+|.++.+.+...+..... ...++   .++||.++ +
T Consensus       169 ~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~-~~~d~---~t~sK~~~-~  243 (379)
T TIGR00707       169 DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYG-IEPDI---ITLAKGLG-G  243 (379)
T ss_pred             hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcC-CCCCE---EEEccccc-C
Confidence            568889987667788864 689999999999999999999999998775554322222222 22232   26899999 9


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK  202 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~  202 (272)
                      |+|+||++++++.        ++.+.........+.+.++|.++.+.++....   .+..++++++++.+++.|++.+..
T Consensus       244 G~riG~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~  312 (379)
T TIGR00707       244 GVPIGATLAKEEV--------AEAFTPGDHGSTFGGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGKN  312 (379)
T ss_pred             CcccEEEEEcHHH--------HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999998877        45554433334455788999988888863221   346677888888888888765322


Q ss_pred             E---ecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          203 V---YGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       203 ~---~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      .   ..+..|.++|+.++. +..++...|. +.||.+.|+.      .+++|+++  ..+++++++++++|++++
T Consensus       313 ~~~~~~~~~g~~~~~~~~~-~~~~~~~~l~-~~Gv~v~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~~  379 (379)
T TIGR00707       313 YPNKEVRGKGLMLGIELEA-PCKDIVKKAL-EKGLLVNCAG------PKVLRFLPPLIITKEEIDEAVSALEEAI  379 (379)
T ss_pred             CCCCccccCceEEEEEecC-cHHHHHHHHH-HCCcEEeeCC------CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence            1   112367889998864 3456666654 5599998853      47899995  469999999999999875

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.92  E-value=1.6e-23  Score=183.72  Aligned_cols=255  Identities=17%  Similarity=0.182  Sum_probs=173.0

Q ss_pred             cccccccC-cc----cchHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQ-AG----DLEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~-~~----~~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+ ++    .|...++..| +++.+++++++...++ +++  .++++++++++++||||.+++   +++|+++|
T Consensus       123 d~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~---~~~I~~l~  199 (424)
T PLN02855        123 DEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILP---VEDIVHWA  199 (424)
T ss_pred             CEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCC---HHHHHHHH
Confidence            45666543 11    2455567778 9999998766443333 322  268999999999999999998   77889999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHH-------
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDF-------  147 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~-------  147 (272)
                      +++|+++++|++|..   +..+..+..+.    ..++++|++|.+|.+|  +||++++++.+... +......       
T Consensus       200 ~~~g~~vivD~a~~~---g~~~~~~~~~~----~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~-~p~~~g~~~~~~~~  269 (424)
T PLN02855        200 HAVGAKVLVDACQSV---PHMPVDVQTLG----ADFLVASSHKMCGPTG--IGFLWGKSDLLESM-PPFLGGGEMISDVF  269 (424)
T ss_pred             HHcCCEEEEEhhhhc---CCcCCCchhcC----CCEEEeecccccCCCc--cEEEEEchhhhhcC-CCEecCCCceeeee
Confidence            999999999999963   11122232222    2278999999887556  89999988774321 1110000       


Q ss_pred             ------H-hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC------CceEEE
Q 036024          148 ------N-RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI------NAPYVW  213 (272)
Q Consensus       148 ------~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~------~~~~~~  213 (272)
                            . ........+++.....++.++++.......++.+++.++.++++++.|+++ |+++.++.      .+.++.
T Consensus       270 ~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~  349 (424)
T PLN02855        270 LDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCA  349 (424)
T ss_pred             cCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEE
Confidence                  0 000111223455555555555542222356888899999999999999887 88887642      245777


Q ss_pred             eecCCCChHHHHHHHHHhcCeEeeCCCCCCC------CCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          214 AHFPGRKSWDVFAEILEKTHITTVPGSGFGP------GGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       214 i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      +.+++....++...|.+++||.+..|..|.+      +..+.+|+|+  ++|.+|++++++.|+++
T Consensus       350 ~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~  415 (424)
T PLN02855        350 FNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDT  415 (424)
T ss_pred             EEECCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            8887666667777766666999998886642      1246899996  68999999999999875

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.91  E-value=4.3e-23  Score=178.89  Aligned_cols=250  Identities=16%  Similarity=0.079  Sum_probs=165.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCC-CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTS-RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI   80 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~   80 (272)
                      |.|++.++++. +...+...| +++.++......+.--++..+ +++++++.+++||||...+   +++|+++|+++|++
T Consensus       124 d~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~---l~~i~~ia~~~~~~  200 (385)
T PRK05958        124 DLIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAP---LAELVALARRHGAW  200 (385)
T ss_pred             CEEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCC---HHHHHHHHHHhCCE
Confidence            55666666555 555555567 777776531111111022111 3445555578999998866   89999999999999


Q ss_pred             EEEcccCCccccCCCCCCcc---ccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh--cc
Q 036024           81 IIFDSAYAAYVTDGCPRSIY---EIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT--CF  155 (272)
Q Consensus        81 vi~D~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  155 (272)
                      +|+||+|..+.++.......   .+. ..+++++++|+||.+|.+|   ||++.+++.        .+.+......  ..
T Consensus       201 li~De~~~~g~~~~~g~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G---g~~~~~~~~--------~~~~~~~~~~~~~~  268 (385)
T PRK05958        201 LLVDEAHGTGVLGPQGRGLAAEAGLA-GEPDVILVGTLGKALGSSG---AAVLGSETL--------IDYLINRARPFIFT  268 (385)
T ss_pred             EEEECcccccccCCCCCchHHhhCCC-CCCceEEEEechhhcccCC---cEEEcCHHH--------HHHHHHhCccceec
Confidence            99999997654432221111   222 2356799999999998766   898888766        4444322211  12


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi  234 (272)
                      .+.+.....++.++++... .. ++..++++++++++.+.|++.|+++..+ .+.++++.+++ .+..++...|.+ +||
T Consensus       269 ~~~~~~~~aa~~aal~~~~-~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~-~gI  344 (385)
T PRK05958        269 TALPPAQAAAARAALRILR-RE-PERRERLAALIARLRAGLRALGFQLMDS-QSAIQPLIVGDNERALALAAALQE-QGF  344 (385)
T ss_pred             CCCCHHHHHHHHHHHHHHh-cC-HHHHHHHHHHHHHHHHHHHHcCCCcCCC-CCCEEEEEeCCHHHHHHHHHHHHH-CCc
Confidence            2244454445555554221 11 5678899999999999999988887665 56788888874 244567777765 499


Q ss_pred             EeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          235 TTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       235 ~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      .+.++..+. +.+.+++|+++.  .+++++++++++|+++|
T Consensus       345 ~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~  385 (385)
T PRK05958        345 WVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL  385 (385)
T ss_pred             eEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence            998865443 334578999974  59999999999999875

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.91  E-value=1.4e-22  Score=173.97  Aligned_cols=256  Identities=18%  Similarity=0.172  Sum_probs=168.8

Q ss_pred             cccccccC--ccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CC-CceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQ--AGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TS-RTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~--~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+  ++. +...++..| +++.+|.+++....++ +++  .+ +++++++++|+||||.+.+   +++|.++|+
T Consensus        75 ~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~  151 (356)
T cd06451          75 DKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAK  151 (356)
T ss_pred             CEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHH
Confidence            45555432  322 456677788 9999998764333333 222  13 8899999999999999988   778899999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc--chHHH------H
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF--PVIND------F  147 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~--~~~~~------~  147 (272)
                      ++|+++++|++|..   +..+.++....  .+  ++++|.+|.++.| .++||++.+++.......  .....      .
T Consensus       152 ~~~~~li~D~~~~~---g~~~~~~~~~~--~d--~~~~s~~K~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (356)
T cd06451         152 KHDALLIVDAVSSL---GGEPFRMDEWG--VD--VAYTGSQKALGAP-PGLGPIAFSERALERIKKKTKPKGFYFDLLLL  223 (356)
T ss_pred             hcCCEEEEeeehhc---cCccccccccC--cc--EEEecCchhccCC-CCcceeEECHHHHHHHHhcCCCCceeecHHHH
Confidence            99999999999863   22222232221  12  6677899999844 358999998877321100  00000      0


Q ss_pred             Hhhh--h-hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CceEEEeecC-CCC
Q 036024          148 NRII--C-TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI---NAPYVWAHFP-GRK  220 (272)
Q Consensus       148 ~~~~--~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~i~l~-~~~  220 (272)
                      ....  . ....+++...+.++.+++........++..++.+++++++.+.|.+.|+++..+.   .+.++|+.++ +.+
T Consensus       224 ~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~  303 (356)
T cd06451         224 LKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGVD  303 (356)
T ss_pred             HhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCCC
Confidence            0000  0 1222344444555555555333345577888999999999999999898886532   3455677776 445


Q ss_pred             hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       221 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ..++...|.+++||.+.+|..+.  .++++|+++  .++++|+++++++|++++
T Consensus       304 ~~~~~~~L~~~~gI~~~~g~~~~--~~~~iRis~~~~~~~e~v~~~~~~l~~~~  355 (356)
T cd06451         304 GDEVVRRLMKRYNIEIAGGLGPT--AGKVFRIGHMGEATREDVLGVLSALEEAL  355 (356)
T ss_pred             HHHHHHHHHHhCCEEEecccccc--cCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            66677676666699999987432  346999997  468999999999999874

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>PLN02483 serine palmitoyltransferase

Probab=99.91  E-value=4e-23  Score=182.98  Aligned_cols=251  Identities=18%  Similarity=0.231  Sum_probs=168.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCC-----ceEEEEec-CCCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSR-----TDIIFFCS-PNNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~-----~~~i~~~~-p~nptG~~~~~~~l~~l   70 (272)
                      |.|++..+.+. +...++..| +++.++.+....++-.+++     .++     .++++++. ..|++|...+   +++|
T Consensus       186 d~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~---l~~I  262 (489)
T PLN02483        186 GLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK---LPEI  262 (489)
T ss_pred             CEEEEcchhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC---HHHH
Confidence            55666665555 666667778 8888886532222111221     122     36666664 4699999866   9999


Q ss_pred             HHHHHHcCCEEEEcccCCccccCCCCCCccccCC--CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024           71 VEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG--AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN  148 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~  148 (272)
                      +++|+++++++|+||+|+....+..+.......+  ..+..|+++||||++|.+|   ||++++++.        ++.+.
T Consensus       263 ~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~i~~~~~l--------i~~l~  331 (489)
T PLN02483        263 VAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GYIAGSKEL--------IQYLK  331 (489)
T ss_pred             HHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eEEEcCHHH--------HHHHH
Confidence            9999999999999999985444332222222211  2345699999999999777   999988887        56665


Q ss_pred             hhhhh---ccCCcchHHHHHHHHhcc----cccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CC
Q 036024          149 RIICT---CFNGASNIAQAGGLACLS----SEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RK  220 (272)
Q Consensus       149 ~~~~~---~~~~~~~~~~~a~~~~l~----~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~  220 (272)
                      .....   ....++...+. +.+.++    ..+.+...+++++++++++++++.|+++|+.+.++.+++.+|+.+.. ..
T Consensus       332 ~~~~~~~~~~~~~p~~~~~-~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~~~sp~~~l~l~~~~~  410 (489)
T PLN02483        332 RTCPAHLYATSMSPPAVQQ-VISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAK  410 (489)
T ss_pred             HhCccccccCCcCHHHHHH-HHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCEEEEEECCHHH
Confidence            44321   11112333333 344342    22223446678899999999999999999988877677787777652 23


Q ss_pred             hHHHHHHHHHhcCeEeeCCCCCC--CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          221 SWDVFAEILEKTHITTVPGSGFG--PGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       221 ~~~~~~~ll~~~gi~v~~g~~~~--~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      ..++..+|+++ ||.+.+ ..|.  +...+.+|++++  .++|++++++++|+++
T Consensus       411 ~~~~~~~Ll~~-GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~  463 (489)
T PLN02483        411 IPAFSRECLKQ-NVAVVV-VGFPATPLLLARARICISASHSREDLIKALEVISEV  463 (489)
T ss_pred             HHHHHHHHHHC-CcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            45677777766 999997 4442  444578999874  5899999999999875

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.91  E-value=6e-23  Score=178.66  Aligned_cols=204  Identities=21%  Similarity=0.215  Sum_probs=147.6

Q ss_pred             CCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++.+++||+| ..++++.+++|.++|+++++++|+||+|.++...+...+.......++    +.|+||.++ +
T Consensus       181 ~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pd----i~t~sK~~~-~  255 (396)
T PRK02627        181 DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPD----IMTLAKGLG-G  255 (396)
T ss_pred             CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCC----EEEEcchhh-C
Confidence            6789999998899999 688999999999999999999999999998765543322222221223    347999999 9


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      |+|+||++++++.        .+.+.......+.+.+++.|.++.++++....   ++..++++++.+.+++.|.++   
T Consensus       256 G~rig~~~~~~~~--------~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~  324 (396)
T PRK02627        256 GVPIGAVLAKEKV--------ADVFTPGDHGSTFGGNPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEK  324 (396)
T ss_pred             CcccEEEEEcHHH--------HhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999877        44444333445556888999998888873222   223445555555555555443   


Q ss_pred             -C-CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          200 -G-IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       200 -g-~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                       + +.... ..|.++|+.++ .+..++...++++ ||.+.|+.      .+++|+++  ..+++++++++++|++++
T Consensus       325 ~~~~~~~~-~~g~~~~i~~~-~~~~~~~~~l~~~-Gv~v~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~l  392 (396)
T PRK02627        325 YPGIKEVR-GLGLMIGIELD-RPAAEIVKKALEK-GLLINVTG------DNVLRLLPPLIISKEEIDEAVDRLEEVL  392 (396)
T ss_pred             CCCeeeec-cCcEEEEEEec-CcHHHHHHHHHHC-CeEEeecC------CCEEEEECCcccCHHHHHHHHHHHHHHH
Confidence             2 22222 35788999884 3566788888777 99998864      46799985  568999999999998763

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.91  E-value=1.8e-22  Score=173.08  Aligned_cols=242  Identities=18%  Similarity=0.177  Sum_probs=164.1

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA   88 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~   88 (272)
                      +...++..| +++.++.+++....++ +++    .++++.+++++++||||...+   +++|+++|+++++++|+|++++
T Consensus        89 ~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~livD~~~s  165 (355)
T TIGR03301        89 LAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSHGAVLIVDAMSS  165 (355)
T ss_pred             HHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHcCCEEEEEeccc
Confidence            456667788 9999998755444443 222    256678888899999999876   8999999999999999999876


Q ss_pred             ccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcc-------hHHHHHhhh--hhccCCc
Q 036024           89 AYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFP-------VINDFNRII--CTCFNGA  158 (272)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~-------~~~~~~~~~--~~~~~~~  158 (272)
                      ..   ..+..+..+    +..++++|++|.+ |.+|  +||++++++.+......       ....+....  .....++
T Consensus       166 ~g---~~~~~~~~~----~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~  236 (355)
T TIGR03301       166 FG---AIPIDIEEL----DVDALIASANKCLEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTP  236 (355)
T ss_pred             cC---Ccccchhhc----CccEEEecCCcccccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCC
Confidence            42   222233332    2338899999987 4456  79999998874321100       000011111  1123356


Q ss_pred             chHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CceEEEeecCC---CChHHHHHHHHHh
Q 036024          159 SNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLGIKVYGGI---NAPYVWAHFPG---RKSWDVFAEILEK  231 (272)
Q Consensus       159 ~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~i~l~~---~~~~~~~~~ll~~  231 (272)
                      +...+.++.+++...... +.++..++++++++++.+.|+++|+++..+.   .+.++|+.++.   .+..++..++. +
T Consensus       237 ~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~  315 (355)
T TIGR03301       237 PTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELK-E  315 (355)
T ss_pred             cHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHH-H
Confidence            777777666666532222 2577888999999999999999998865442   24567888874   23345555554 5


Q ss_pred             cCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      .||.+.+|..+.   .+++|+++.  .++++++++++.|+++|
T Consensus       316 ~gi~i~~~~~~~---~~~iRis~~~~~~~~~i~~~~~~l~~~~  355 (355)
T TIGR03301       316 RGFVIYPGKLTL---ADTFRIGTIGEIDAADIERLLEAIKDAL  355 (355)
T ss_pred             CCEEEECCcccc---ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence            599999987543   378999963  48999999999999875

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.91  E-value=9.1e-23  Score=176.67  Aligned_cols=238  Identities=16%  Similarity=0.143  Sum_probs=165.2

Q ss_pred             HHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVT   92 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~   92 (272)
                      ..++..| +++.+|+++++.+.++ +++  .++++++++++|+||||.+++   +++|.++|+++|+++++|+++..   
T Consensus       108 ~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~~ivD~a~~~---  181 (382)
T TIGR03403       108 AFLESLGVEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFP---IKEIGEICKERGVLFHTDAVQAI---  181 (382)
T ss_pred             HHHHHCCCEEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HHHHHHHHHHcCCEEEEechhhc---
Confidence            3445678 9999999765333333 322  257899999999999999998   77889999999999999999873   


Q ss_pred             CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccc
Q 036024           93 DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS  172 (272)
Q Consensus        93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  172 (272)
                      +..+..+..+.  .|  +++.|++|.+|.+|  +|++.+++......  . .............+++.+++.++.+.++ 
T Consensus       182 g~~~~~~~~~~--~D--~~~~s~~K~~gp~G--~g~l~vr~~~~~~p--~-~~g~~~~~~~~~gt~~~~~~~al~~al~-  251 (382)
T TIGR03403       182 GKIPVDVQKAG--VD--FLSFSAHKFHGPKG--VGGLYIRKGVELTP--L-FHGGEHMGGRRSGTLNVPYIVAMGEAMR-  251 (382)
T ss_pred             CCCccCccccC--CC--EEEEcchhhCCCCc--eEEEEECCCCCCCC--c-ccCCCCCCCcccCCcChHHHHHHHHHHH-
Confidence            11122222221  12  88889999888778  68888776552111  0 1000001112234577777777777775 


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC---ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCC---
Q 036024          173 EGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN---APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPG---  245 (272)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---  245 (272)
                      ...+.++...+++++.++++.+.|+++ |+.+.++..   ..++.+.+++.+..++...| .++||.+..|+.|...   
T Consensus       252 ~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~v~~g~~c~~~~~~  330 (382)
T TIGR03403       252 LANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVEGEAMLWDL-NKAGIAASTGSACASEDLE  330 (382)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCCHHHHHHhh-ccCCEEEEchhccCCCCCC
Confidence            223456778899999999999999886 788887532   45777788776777766665 5569999988776411   


Q ss_pred             --------------CCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          246 --------------GEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       246 --------------~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                                    ..+.+|+|+  ++|++|+++++++|+++
T Consensus       331 ~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~  372 (382)
T TIGR03403       331 ANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKA  372 (382)
T ss_pred             cCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHH
Confidence                          136799996  67999999999999865

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PRK02948 cysteine desulfurase; Provisional

Probab=99.91  E-value=3.7e-23  Score=179.05  Aligned_cols=240  Identities=13%  Similarity=0.119  Sum_probs=163.7

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY   90 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~   90 (272)
                      +...++..| +++.+++++++...+| +++  .++++++++++|+||||.+++   +++|.++|+++++++++|+++...
T Consensus       104 ~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~g  180 (381)
T PRK02948        104 YFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQP---IAEIGALLKKYNVLFHSDCVQTFG  180 (381)
T ss_pred             HHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehh---HHHHHHHHHHcCCEEEEEChhhcc
Confidence            334556678 9999998755333333 332  257889999999999999987   778999999999999999877532


Q ss_pred             ccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhc
Q 036024           91 VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACL  170 (272)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l  170 (272)
                         ..+..+..+    +..+++.|+||.+|.+|  +|+++++++...   ................+++.+++.++.+++
T Consensus       181 ---~~~~~~~~~----~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~---~~~~~~~~~~~~~~~~t~~~~~~~a~~~al  248 (381)
T PRK02948        181 ---KLPIDVFEM----GIDSLSVSAHKIYGPKG--VGAVYINPQVRW---KPVFPGTTHEKGFRPGTVNVPGIAAFLTAA  248 (381)
T ss_pred             ---ccccCcccC----CCCEEEecHHhcCCCCc--EEEEEEcCCCCC---CCcccCCCCCCCcCCCCccHHHHHHHHHHH
Confidence               112222222    23488899999999788  799888776410   000000000011234457888888888888


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCc-----eEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCC
Q 036024          171 SSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINA-----PYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPG  245 (272)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-----~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~  245 (272)
                      ... .++.++.++++++.++++++.|+++|+++......     .++.+.+++.+..++...| +++||.+.+|+.|...
T Consensus       249 ~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l-~~~gI~v~~g~~c~~~  326 (381)
T PRK02948        249 ENI-LKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLEC-NRRGIAISTGSACQVG  326 (381)
T ss_pred             HHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhc-ccCCEEEEchHhcCCC
Confidence            743 24678889999999999999999988765533211     2333444554555666655 5669999998865321


Q ss_pred             -----------------CCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          246 -----------------GEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       246 -----------------~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                                       ..+.+|+|+  +++++|++++++.|+++
T Consensus       327 ~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~  371 (381)
T PRK02948        327 KQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETI  371 (381)
T ss_pred             CCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence                             147899997  46999999999999875

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.91  E-value=5.5e-23  Score=179.04  Aligned_cols=205  Identities=17%  Similarity=0.159  Sum_probs=150.1

Q ss_pred             CCceEEEEecCCCccccCC--CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA--TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~--~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++++|++. |.||+|.++  +.+.+++|+++|++||+++|+||+|.++.+.+...+.......++    +.|+||.++ 
T Consensus       183 ~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd----i~s~sK~l~-  256 (403)
T PRK05093        183 DHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD----ILTSAKALG-  256 (403)
T ss_pred             CCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC----EEEeccccc-
Confidence            456666666 878887765  889999999999999999999999998766654322222222233    458999999 


Q ss_pred             CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-  200 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-  200 (272)
                      +|+|+||+++++++        .+.+.......+.+.+++.|.++.+.++....   .+..++++++.+++.+.|++++ 
T Consensus       257 ~G~rig~vv~~~~i--------~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~  325 (403)
T PRK05093        257 GGFPIGAMLTTAEI--------ASHFKVGTHGSTYGGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQ  325 (403)
T ss_pred             CCcceEEEEEcHHH--------HhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999887        44444333334456788899888887753221   4566889999999999998863 


Q ss_pred             ---CeEecCCCceEEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          201 ---IKVYGGINAPYVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       201 ---~~~~~~~~~~~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                         +....+..|.++|+.++..   ...++...++++ ||.+.|+.      .+++|++  +..+++++++++++|++++
T Consensus       326 ~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~-Gv~v~~~g------~~~lRl~~~~~~~~~~i~~~~~~l~~~l  398 (403)
T PRK05093        326 KYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAEE-GVMVLVAG------PDVLRFAPSLVIEEADIDEGLARFEKAV  398 (403)
T ss_pred             hCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHHC-CeEEecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence               2222334688999998632   355677777776 99998642      5789996  4558999999999998763

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.91  E-value=1e-22  Score=177.67  Aligned_cols=254  Identities=19%  Similarity=0.199  Sum_probs=168.1

Q ss_pred             cccccccCc-----ccchHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQA-----GDLEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~-----~~~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.     ..|...++..| +++.++.++++...++ +++  .++++++++++|+||||.+++   +++|.++|
T Consensus       109 ~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~---~~~i~~~~  185 (403)
T TIGR01979       109 DEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNP---VEEIAKLA  185 (403)
T ss_pred             CEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCC---HHHHHHHH
Confidence            445555542     12445556778 9999998854333333 222  367999999999999999988   88899999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHH--------
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND--------  146 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~--------  146 (272)
                      +++|+++++|++|+...   .+..+..+    +..+++.|++|.+|.+|  +|+++++++.+....+ ....        
T Consensus       186 ~~~~~~~ivD~a~~~g~---~~~~~~~~----~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~-~~~g~~~~~~~~  255 (403)
T TIGR01979       186 HQVGAKVLVDGAQAVPH---MPVDVQAL----DCDFYVFSGHKMYGPTG--IGVLYGKEELLEQMPP-FLGGGEMIAEVS  255 (403)
T ss_pred             HHcCCEEEEEchhhcCc---cccCcccc----CCCEEEEecccccCCCC--ceEEEEchHHHhcCCC-eecCCCceeecc
Confidence            99999999999997422   12222222    23388999999988666  8999988776432110 0000        


Q ss_pred             -----HHhh-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC----ceEEEee
Q 036024          147 -----FNRI-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN----APYVWAH  215 (272)
Q Consensus       147 -----~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~----~~~~~i~  215 (272)
                           +... ......+++...+.++.+.++.......++.+++..+.++.+++.|+++ |+++.++..    +.++.+.
T Consensus       256 ~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~  335 (403)
T TIGR01979       256 FEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFN  335 (403)
T ss_pred             cCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEE
Confidence                 0000 0011123455555555555542222234677889999999999999887 888877542    5566677


Q ss_pred             cCCCChHHHHHHHHHhcCeEeeCCCCCC------CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          216 FPGRKSWDVFAEILEKTHITTVPGSGFG------PGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       216 l~~~~~~~~~~~ll~~~gi~v~~g~~~~------~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      +++.+..++.. .++++||.+.+|..|.      ....+++|+|+  +++++|++++++.|+++
T Consensus       336 ~~~~~~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~  398 (403)
T TIGR01979       336 VEGVHPHDVGT-ILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKV  398 (403)
T ss_pred             eCCcCHHHHHH-HHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHH
Confidence            77655556554 5566799999887542      11257899996  56999999999999765

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PRK10534 L-threonine aldolase; Provisional

Probab=99.91  E-value=5.5e-23  Score=174.87  Aligned_cols=237  Identities=16%  Similarity=0.170  Sum_probs=153.8

Q ss_pred             cccccccCccc--chHH-hcccc--eeEEeecCCCCCcccCCCC----C-C------CceEEEEecCCCccccCCCHHHH
Q 036024            4 DSSVIVGQAGD--LEDE-VGKYC--NIEYLECGPGNNFFPDLKG----T-S------RTDIIFFCSPNNPTGHAATQNQL   67 (272)
Q Consensus         4 d~~~~~~~~~~--~~~~-~~~~g--~~~~~~~~~~~~~~~dl~~----~-~------~~~~i~~~~p~nptG~~~~~~~l   67 (272)
                      |.|++..|++.  |... ....+  +.+.++.+.  ++.+|+++    . +      ++++++++||+  ||.+++.+++
T Consensus        74 d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l  149 (333)
T PRK10534         74 EEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYL  149 (333)
T ss_pred             CeeEEechhhhhHhcCCchHHhcCceEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHH
Confidence            55665555544  2211 22333  556666643  45666433    1 2      58899999765  5999999999


Q ss_pred             HHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcccee-EEEecccccccCCcchHHH
Q 036024           68 EQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLG-WTVVPEELLFSSGFPVIND  146 (272)
Q Consensus        68 ~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G-~~~~~~~~~~~~~~~~~~~  146 (272)
                      ++|+++|+++++++++||+|..............+....++++  .||||.+|++   +| |++++++.        ++.
T Consensus       150 ~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~~~~~~~--------i~~  216 (333)
T PRK10534        150 KQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFT--ICLSKGLGTP---VGSLLVGNRDY--------IKR  216 (333)
T ss_pred             HHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEE--EEeEcCCCCc---ccceEEcCHHH--------HHH
Confidence            9999999999999999999863221110122222222223333  4899998854   67 67777777        566


Q ss_pred             HHhhhhhccCC--cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHH
Q 036024          147 FNRIICTCFNG--ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDV  224 (272)
Q Consensus       147 ~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~  224 (272)
                      +..........  .+.+.+.++.+.++.    . .+..++.+++++++.+.|+++|+++.++ +++|+|+.++.....++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~----~-~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~~nfv~~~~~~~~~~~~  290 (333)
T PRK10534        217 ARRWRKMTGGGMRQAGILAAAGLYALKH----N-VARLQEDHDNAAWLAEQLREAGADVMRQ-DTNMLFVRVGEEQAAAL  290 (333)
T ss_pred             HHHHHHHhCCchhhHHHHHHHHHHHHHh----h-HHHHHHHHHHHHHHHHHHHhCCCccCCC-CceEEEEECCchhHHHH
Confidence            66555433221  233445555555531    1 2333345556789999999999998876 69999999974334444


Q ss_pred             HHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          225 FAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                       .++++++||.+.|+.        ++|++.  ..+++++++++++|++++
T Consensus       291 -~~~l~~~gi~v~~~~--------~~rl~~~~r~t~e~~~~~~~~l~~~~  331 (333)
T PRK10534        291 -GEYMRERNVLINASP--------IVRLVTHLDVSREQLAEVVAHWRAFL  331 (333)
T ss_pred             -HHHHHHcCeeecCCc--------eEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence             456666699998763        578875  468999999999998764

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.91  E-value=2.7e-22  Score=174.94  Aligned_cols=249  Identities=18%  Similarity=0.174  Sum_probs=164.1

Q ss_pred             cccccccCccc-chHH-----hcccc-eeEEeecCCCC-CcccCCCC------CCCceEEEEecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDE-----VGKYC-NIEYLECGPGN-NFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~-----~~~~g-~~~~~~~~~~~-~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..+.+. +...     ++..| +++.++++.+. ++.+|++.      .++++++++++|+||+.  .   ++++
T Consensus       106 d~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~~~--~---~~~~  180 (402)
T cd00378         106 DTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYPRP--I---DFKR  180 (402)
T ss_pred             CEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccCCC--c---CHHH
Confidence            56777665543 2222     55567 77777776542 45666443      25789999989888753  2   3899


Q ss_pred             HHHHHHHcCCEEEEcccCC-ccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHH
Q 036024           70 LVEFARNNGSIIIFDSAYA-AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDF  147 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~  147 (272)
                      |+++|+++|+++|+|++|. ++.+.+.......   ..+  ++++|+||++  +|.|.||+++++ ++        .+.+
T Consensus       181 I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~---~~d--v~~~s~sK~l--~G~~gg~i~~~~~~~--------~~~l  245 (402)
T cd00378         181 FREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP---GAD--VVTTTTHKTL--RGPRGGLILTRKGEL--------AKKI  245 (402)
T ss_pred             HHHHHHhcCCEEEEEccchhhhhhcccCCCccc---CCc--EEEeccccCC--CCCCceEEEeccHHH--------HHHH
Confidence            9999999999999999974 4433332121111   122  7899999977  678899999987 55        5555


Q ss_pred             HhhhhhccCCcchH-HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEe-cCCCceEEEeecCC-CChHHH
Q 036024          148 NRIICTCFNGASNI-AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY-GGINAPYVWAHFPG-RKSWDV  224 (272)
Q Consensus       148 ~~~~~~~~~~~~~~-~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~i~l~~-~~~~~~  224 (272)
                      .........+.+.. .+.++...+......+.++.+++++++++++.+.|++.|+.+. .+.+++++|+.++. ....+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~v~v~~~~~~~~~~~  325 (402)
T cd00378         246 NSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDNHLVLVDLRPKGITGKA  325 (402)
T ss_pred             HHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCCeEEEEeCCccCCCHHH
Confidence            44443333323322 2222233333222225577888999999999999999998876 45679999999973 223345


Q ss_pred             HHHHHHhcCeEeeCCCCCC----CCCCCeEEEEccC------CHHHHHHHHHHHHHhC
Q 036024          225 FAEILEKTHITTVPGSGFG----PGGEEYIRISGFG------HRESILEASRRLEALF  272 (272)
Q Consensus       225 ~~~ll~~~gi~v~~g~~~~----~~~~~~~R~s~~~------~~~~i~~~l~~l~~~l  272 (272)
                      +.++++++||.+.++....    +....++|+++..      +++|++++++.|++++
T Consensus       326 ~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~  383 (402)
T cd00378         326 AEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARAL  383 (402)
T ss_pred             HHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence            5667788899998643222    1235689999632      5899999999998753

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.91  E-value=6.1e-22  Score=170.42  Aligned_cols=241  Identities=15%  Similarity=0.132  Sum_probs=166.6

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA   89 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~   89 (272)
                      ...++..| +++.++.+++....++ +++    .++++++.+++++||||..++   +++|+++|+++++++++|++++.
T Consensus        94 ~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~  170 (363)
T TIGR02326        94 VQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF  170 (363)
T ss_pred             HHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc
Confidence            45567788 9999998765555554 222    346788888999999999988   78999999999999999998763


Q ss_pred             cccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcc-------hHHHHHhhh---hhccCCc
Q 036024           90 YVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFP-------VINDFNRII---CTCFNGA  158 (272)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~-------~~~~~~~~~---~~~~~~~  158 (272)
                         +..+..+..+..  |  ++++|++|.+ |.+|  +||++++++.+......       ....+....   ....++.
T Consensus       171 ---g~~~~~~~~~~~--D--~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~  241 (363)
T TIGR02326       171 ---GGIPIDIAELHI--D--YLISSANKCIQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTS  241 (363)
T ss_pred             ---cCcccchhhcCc--c--EEEecCccccccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCC
Confidence               333344444421  2  8889999987 4456  79999988764221000       000111111   1122346


Q ss_pred             chHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CceEEEeecCC---CChHHHHHHHHHh
Q 036024          159 SNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLGIKVYGGI---NAPYVWAHFPG---RKSWDVFAEILEK  231 (272)
Q Consensus       159 ~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~i~l~~---~~~~~~~~~ll~~  231 (272)
                      +...+.++.++++....+ ..++++++++++++++++.|.++|+.+..+.   .+...++.++.   .+..++...| ++
T Consensus       242 ~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L-~~  320 (363)
T TIGR02326       242 PTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRL-KE  320 (363)
T ss_pred             cHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCCCCHHHHHHHH-HH
Confidence            777777776666532222 3577889999999999999999998876542   34456777764   2445555555 45


Q ss_pred             cCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.||..+.   .+.+|++.  ..+.+++++++++|+++|
T Consensus       321 ~gi~v~~g~~~~---~~~iRi~~~~~~~~edv~~~l~~l~~~l  360 (363)
T TIGR02326       321 QGFVIYPGKVSQ---VDCFRIGNIGEVDAADITRLLTAIGKAM  360 (363)
T ss_pred             CCEEEECCcCCC---CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            599999987552   46899995  359999999999998875

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.90  E-value=1.2e-22  Score=173.87  Aligned_cols=251  Identities=20%  Similarity=0.142  Sum_probs=163.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC---CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT---SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      |.|++..+.+. +...+...| ++++++........--++..   ++++++++++++||||...+   +++|+++|+++|
T Consensus        86 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~  162 (349)
T cd06454          86 DLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKYG  162 (349)
T ss_pred             CEEEEehhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC---HHHHHHHHHHcC
Confidence            55666655444 445566677 88777542111110002221   35677888899999999876   899999999999


Q ss_pred             CEEEEcccCCccccCCCCCCccccC-CCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh--cc
Q 036024           79 SIIIFDSAYAAYVTDGCPRSIYEIP-GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT--CF  155 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  155 (272)
                      +++|+|++|.....+.......... ...+..++++|+||.+|.+|   ||++.+++.        .+.+......  ..
T Consensus       163 ~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~~~--------~~~~~~~~~~~~~~  231 (349)
T cd06454         163 AILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSKEL--------IDYLRSYARGFIFS  231 (349)
T ss_pred             CEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCHHH--------HHHHHHhchhhhcc
Confidence            9999999997533322111111111 12345699999999998655   998888776        3334332221  11


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi  234 (272)
                      .+.+...+.++.+.++....  .+..+++++++++.+.+.|+++|+.+.++.++.+.++.++ ..+..++...|.++ ||
T Consensus       232 ~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI  308 (349)
T cd06454         232 TSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDDPAKAVAFSDALLER-GI  308 (349)
T ss_pred             CCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCChHHHHHHHHHHHhC-Cc
Confidence            23555555556666542211  3667899999999999999998888777655555555554 33456677777766 99


Q ss_pred             EeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          235 TTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       235 ~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      .+.++.... ..+.+++|+++.  .+++++++++++|+++
T Consensus       309 ~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         309 YVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             eEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            998764221 223578999974  6999999999999864

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.90  E-value=2.2e-22  Score=175.64  Aligned_cols=211  Identities=20%  Similarity=0.190  Sum_probs=150.9

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC-CCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA-REVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~  122 (272)
                      +++++|++++++||+|.+.+   +++|.++|+++++++|+||+|....+++.+..+....+. .+..++++||||++|++
T Consensus       177 ~~~~~v~~~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~  253 (407)
T PRK09064        177 DRPKLIAFESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVM  253 (407)
T ss_pred             CCCeEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhcc
Confidence            46789999999999999987   899999999999999999999843334333333222221 23358899999999987


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhh--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICT--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g  200 (272)
                      |   ||++++++.        ++.+......  ...+.++..+.++.+.++....  ....+++++++++++.+.|+++|
T Consensus       254 G---G~~~~~~~~--------~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g  320 (407)
T PRK09064        254 G---GYIAGSAAL--------VDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE--SNEERERHQERAAKLKAALDAAG  320 (407)
T ss_pred             C---ceEecCHHH--------HHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcC
Confidence            7   999888776        4444433322  1223555566666666652211  13456889999999999999999


Q ss_pred             CeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          201 IKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       201 ~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      +++.++ .+.++++.++. ....++..+|++++||.+.+...+. +.+..++|+++  ..+++|++++++.|+++
T Consensus       321 ~~~~~~-~~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~  394 (407)
T PRK09064        321 IPVMPN-ESHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEV  394 (407)
T ss_pred             CCCCCC-CCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            887765 46677777753 2345677777777799998865433 23457899996  45999999999999875

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.90  E-value=2.7e-22  Score=174.83  Aligned_cols=210  Identities=22%  Similarity=0.216  Sum_probs=150.5

Q ss_pred             CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC-CCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA-REVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~g  123 (272)
                      ++++|++++|+||||.+.+   +++|.++|+++++++|+||+|....+++....+....+. .+..++++|+||++|.+|
T Consensus       177 ~~~~v~~e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G  253 (402)
T TIGR01821       177 RPKIIAFESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG  253 (402)
T ss_pred             CCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC
Confidence            5789999999999999987   899999999999999999999854444322222222121 223588899999999888


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhh--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICT--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI  201 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~  201 (272)
                         ||++++++.        ++.+......  .+.+.++..+.++.+.++.....  +..+++.+++.+++++.|+++|+
T Consensus       254 ---G~i~~~~~~--------~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~  320 (402)
T TIGR01821       254 ---GYIAASRKL--------IDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGI  320 (402)
T ss_pred             ---ceeecCHHH--------HHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCC
Confidence               998888776        4555433221  23345666777777777532211  45566778999999999999998


Q ss_pred             eEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          202 KVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       202 ~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      ++.++ .+.++.+.++.. ...++...|++++||.+.+...+. +.+..++|+++  ..+++|++++++.|+++
T Consensus       321 ~~~~~-~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~  393 (402)
T TIGR01821       321 PVIPN-PSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLV  393 (402)
T ss_pred             CcCCC-CCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            87765 466666766531 245677777777799998865433 33457899996  56999999999999875

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.90  E-value=1e-22  Score=177.20  Aligned_cols=251  Identities=18%  Similarity=0.164  Sum_probs=161.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+++. +...+...| +++.++......+.-.++.    ..+++++++.+.+||||...   ++++|.++|+++
T Consensus       127 d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~---~~~~l~~la~~~  203 (397)
T PRK06939        127 DAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA---PLPEICDLADKY  203 (397)
T ss_pred             CEEEEEhhhhHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC---CHHHHHHHHHHh
Confidence            56677666655 555566667 7777765211111111221    12667777767899999864   499999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCC-CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh--c
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT--C  154 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~  154 (272)
                      ++++|+||+|.....+....+.....+ .++..++++|+||.++  |+|+||++++++.        ++.+......  .
T Consensus       204 ~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~~~~--------~~~l~~~~~~~~~  273 (397)
T PRK06939        204 DALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGRKEV--------IDWLRQRSRPYLF  273 (397)
T ss_pred             CCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeCHHH--------HHHHHHhCccccc
Confidence            999999999963222221111111111 2234599999999994  3589999998877        4555433221  1


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcC
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTH  233 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~g  233 (272)
                      ..+.+...+.++.+.++..  ...++++++++++++.+.+.|+++|+++..+.++ ++++.++. .+..++...|+++ |
T Consensus       274 ~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~-g  349 (397)
T PRK06939        274 SNSLAPAIVAASIKVLELL--EESDELRDRLWENARYFREGMTAAGFTLGPGEHP-IIPVMLGDAKLAQEFADRLLEE-G  349 (397)
T ss_pred             cCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCC-EEEEEECCHHHHHHHHHHHHHC-C
Confidence            2222333344444444321  1225778999999999999999988877665444 44444542 3456777888777 9


Q ss_pred             eEeeCCCCCC--CCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          234 ITTVPGSGFG--PGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       234 i~v~~g~~~~--~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      |.+.++. |.  +.+.+++|+++  +.+++++++++++|++++
T Consensus       350 I~v~~~~-~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~  391 (397)
T PRK06939        350 VYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVG  391 (397)
T ss_pred             ceEeeeC-CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence            9998644 43  23457899886  468999999999998763

>PLN02721 threonine aldolase

Probab=99.90  E-value=5.4e-22  Score=170.11  Aligned_cols=246  Identities=14%  Similarity=0.142  Sum_probs=156.6

Q ss_pred             cccccccCcc-c-chH--Hhcccc-eeEEeecCCCCCcccC-CCC----C-----CCceEEEEec-CCCccccCCCHHHH
Q 036024            4 DSSVIVGQAG-D-LED--EVGKYC-NIEYLECGPGNNFFPD-LKG----T-----SRTDIIFFCS-PNNPTGHAATQNQL   67 (272)
Q Consensus         4 d~~~~~~~~~-~-~~~--~~~~~g-~~~~~~~~~~~~~~~d-l~~----~-----~~~~~i~~~~-p~nptG~~~~~~~l   67 (272)
                      |.|++..+.+ . |..  .+...| +++.+|.+++..+.+| +++    .     ++++++++++ +|||||.+++.+++
T Consensus        81 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l  160 (353)
T PLN02721         81 SEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYT  160 (353)
T ss_pred             CeEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHH
Confidence            5677766653 2 332  456677 8888887654333333 222    1     4789999986 58999999999999


Q ss_pred             HHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeE-EEecccccccCCcchHHH
Q 036024           68 EQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGW-TVVPEELLFSSGFPVIND  146 (272)
Q Consensus        68 ~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~-~~~~~~~~~~~~~~~~~~  146 (272)
                      ++|.++|+++|+++++|++|..........+........+  .++.|+||.++.+   +|| ++.++++        ++.
T Consensus       161 ~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~~---~G~~~~~~~~~--------~~~  227 (353)
T PLN02721        161 DKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAAD--SVSVCLSKGLGAP---VGSVIVGSKSF--------IRK  227 (353)
T ss_pred             HHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCC--EEEEecccccCCc---eeeEEecCHHH--------HHh
Confidence            9999999999999999999863221101122222211223  4455799998743   566 5566666        444


Q ss_pred             HHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeE-ecCCCceEEEeecCC---CCh
Q 036024          147 FNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKV-YGGINAPYVWAHFPG---RKS  221 (272)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~i~l~~---~~~  221 (272)
                      +.........+.+..++.++..+..  ...+.++ .++..++++.+.+.|+++ ++.+ ..+..++++|+.++.   ...
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~-~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (353)
T PLN02721        228 AKRLRKTLGGGMRQVGVLAAAALVA--LQENVPK-LEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITA  304 (353)
T ss_pred             HHHHHHhcCCCeehhHHHHHHHHHH--HHHHHHH-HHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccH
Confidence            4433332222222232222222211  1122333 344467788999999988 7754 333456789999874   356


Q ss_pred             HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       222 ~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      .++..+|. ++||.+.|+.      ..++|+++  +.+++|+++++++|++++
T Consensus       305 ~~~~~~L~-~~gi~v~~~~------~~~lR~~~~~~~~~~~i~~~~~~l~~~~  350 (353)
T PLN02721        305 EKLCKSLE-EHGVLLMPGN------SSRIRVVTHHQISDSDVQYTLSCFQQAA  350 (353)
T ss_pred             HHHHHHHH-hCCcEEecCC------CceEEEEecCcCCHHHHHHHHHHHHHHh
Confidence            66677766 6699999874      56899997  458999999999998764

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.90  E-value=9.9e-22  Score=170.89  Aligned_cols=258  Identities=15%  Similarity=0.114  Sum_probs=176.3

Q ss_pred             cccccccC-ccc--chHHhcccc-eeEEeecCCCCCcccC-CCC-C-----CCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQ-AGD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T-----SRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~-~~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |+|++..+ ++.  |...++..| +++.++.+++.++.++ +++ +     ++++++++++++||||.+++.+++.++++
T Consensus        85 d~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~  164 (401)
T PLN02409         85 DKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD  164 (401)
T ss_pred             CEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh
Confidence            55666552 222  346667788 9999998865444433 222 1     37899999999999999999655555555


Q ss_pred             HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcc----hHHHHH
Q 036024           73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFP----VINDFN  148 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~----~~~~~~  148 (272)
                       |+++|+++|+|++++.   +..+..+..+.    ..+++.|.+|.++.| .++||++.+++.+....+.    ..-.+.
T Consensus       165 -~~~~g~~~vvD~v~s~---g~~~id~~~~~----~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~  235 (401)
T PLN02409        165 -CAQHPALLLVDGVSSI---GALDFRMDEWG----VDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWA  235 (401)
T ss_pred             -hhccCcEEEEEccccc---CCccccccccC----ccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHH
Confidence             9999999999999873   22122233332    127777889999643 3699999988774321100    000000


Q ss_pred             h---hhh---hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC----CceEEEeecC-
Q 036024          149 R---IIC---TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI----NAPYVWAHFP-  217 (272)
Q Consensus       149 ~---~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~i~l~-  217 (272)
                      .   ...   ....+++...+.++.++++.......++++++++++++++++.|+++|+++..+.    ....+++.++ 
T Consensus       236 ~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~  315 (401)
T PLN02409        236 DYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPE  315 (401)
T ss_pred             HHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCC
Confidence            0   111   1133577777777777777444456788999999999999999999998887642    2245667776 


Q ss_pred             CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          218 GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       218 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      +.+..++...+++++||.+.+|..  ......+|++.  +++.+++..++.+|+++|
T Consensus       316 ~~~~~~l~~~l~~~~~i~i~~G~~--~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l  370 (401)
T PLN02409        316 GIDSAEIVKNAWKKYNLSLGLGLN--KVAGKVFRIGHLGNVNELQLLGALAGVEMVL  370 (401)
T ss_pred             CCCHHHHHHHHHHhCCEEEEcCCC--cccCCEEEEcCCCCCCHHHHHHHHHHHHHHH
Confidence            556677778888999999988763  33467899995  568999999999998764

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.90  E-value=1.3e-22  Score=176.39  Aligned_cols=209  Identities=18%  Similarity=0.213  Sum_probs=144.1

Q ss_pred             CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC-CCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA-REVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~g  123 (272)
                      ++++|++.+++||||.+.+   +++|+++|++||+++|+||+|.....+....+.....+. .+..++++|+||.++  |
T Consensus       170 ~~~~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~--g  244 (393)
T TIGR01822       170 RHRLIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG--G  244 (393)
T ss_pred             CceEEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh--C
Confidence            6778888889999999976   899999999999999999999643333222222222211 234599999999875  5


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhh--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICT--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI  201 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~  201 (272)
                      +|+||++++++.        .+.+......  ...+.+...+.++.+.++..  +..++++++++++++++.+.|++.|+
T Consensus       245 ~r~G~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~  314 (393)
T TIGR01822       245 ASGGFTTARKEV--------VELLRQRSRPYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAAGF  314 (393)
T ss_pred             CCcEEEEeCHHH--------HHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence            789999998877        4555442221  12223444444455555421  23467889999999999999998888


Q ss_pred             eEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCC--CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          202 KVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFG--PGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       202 ~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      .+.++ .+.++.+.++. ....++...|+++ ||.+. +..|.  +.+...+|+++  ..+++|+++++++|+++
T Consensus       315 ~~~~~-~~~~~~i~~~~~~~~~~l~~~L~~~-gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~  386 (393)
T TIGR01822       315 DIKPA-DHPIIPVMLYDAVLAQRFARRLLEE-GIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRI  386 (393)
T ss_pred             CCCCC-CCCEEEEEeCCHHHHHHHHHHHHHC-CeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            77654 34455555543 3456677777766 99997 55553  23445789885  56899999999999875

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.90  E-value=2.3e-22  Score=175.10  Aligned_cols=206  Identities=14%  Similarity=0.102  Sum_probs=150.7

Q ss_pred             CCceEEEEecCCCccccCCCHHH-HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQ-LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++..++||||.++++++ +++|.++|++||+++|+||+|.++...+...........+|    +.++||.+| +
T Consensus       182 ~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pD----i~t~sK~l~-~  256 (398)
T PRK03244        182 DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPD----VVTLAKGLG-G  256 (398)
T ss_pred             CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCC----EEEEchhhh-C
Confidence            57889999888999999997655 99999999999999999999987655443221111121233    237899999 9


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK  202 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~  202 (272)
                      |+|+||++++++.        .+.+.......+++.+++.+.++.+.++....   .+..++++++.+++++.|++++..
T Consensus       257 G~~ig~~~~~~~~--------~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~  325 (398)
T PRK03244        257 GLPIGACLAFGPA--------ADLLTPGLHGSTFGGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEALGHP  325 (398)
T ss_pred             CcccEEEEEcHHH--------HhhccCCCCcCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999999887        44444333444556888999999998763222   345677888888899999886542


Q ss_pred             Ee--cCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          203 VY--GGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       203 ~~--~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ..  ....|.++|+.++......+..+++++ ||.+.+..      .+.+|+++  ..+++|+++++++|++++
T Consensus       326 ~~~~v~g~g~~~~i~~~~~~~~~~~~~l~~~-Gv~~~~~~------~~~iR~~p~~~~t~~~i~~~~~~l~~~l  392 (398)
T PRK03244        326 LVDHVRGRGLLLGIVLTAPVAKAVEAAAREA-GFLVNAVA------PDVIRLAPPLIITDAQVDAFVAALPAIL  392 (398)
T ss_pred             ceeeEeeccEEEEEEEeccHHHHHHHHHHHC-CeEEeecC------CCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence            21  113688999999743445566666655 99997732      46899995  468999999999998764

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.90  E-value=5.3e-22  Score=172.23  Aligned_cols=204  Identities=21%  Similarity=0.179  Sum_probs=143.8

Q ss_pred             CCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++++|++..++||+| .+++.+.+++|.++|++||+++|+||+|.++...+...........+|    +.|+||.++ +
T Consensus       174 ~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd----i~t~sK~l~-~  248 (389)
T PRK01278        174 PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD----IMAVAKGIG-G  248 (389)
T ss_pred             CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC----EEEEehhcc-C
Confidence            5788999987799999 788999999999999999999999999998765543222111211223    348999998 9


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      |+|+||++++++.        .+.+.......+.+.+++.+.++.+.++....   ....++++++.+++++.|+++   
T Consensus       249 G~~ig~~~~~~~~--------~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~l~~~  317 (389)
T PRK01278        249 GFPLGACLATEEA--------AKGMTPGTHGSTYGGNPLAMAVGNAVLDVILA---PGFLDNVQRMGLYLKQKLEGLVDR  317 (389)
T ss_pred             CcceEEEEEcHHH--------HhccCCCCCCCCCCccHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999998877        44444444455556888999988777763211   122334444444444444432   


Q ss_pred             -C-C-eEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          200 -G-I-KVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       200 -g-~-~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                       . + ....+ .|.++++.++. +..++..+++++ ||.+.|+.      .+++||++  ..+++++++++++|++++
T Consensus       318 ~~~~~~~v~g-~G~~~~i~~~~-~~~~~~~~l~~~-GV~~~p~~------~~~lR~~p~~~~~~~~i~~~l~~l~~~l  386 (389)
T PRK01278        318 FPDVIEEVRG-KGLLLGLKCVV-PNRDLVQALRDE-GLLTVGAG------DNVVRLLPPLIITEEEIDEALERLERAA  386 (389)
T ss_pred             CCCceeeEec-ccEEEEEEEec-CHHHHHHHHHHC-CeEEeecC------CCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence             2 2 22233 57788887754 466778888877 99998863      57899984  468999999999998764

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.89  E-value=8.9e-22  Score=171.40  Aligned_cols=249  Identities=15%  Similarity=0.164  Sum_probs=160.4

Q ss_pred             cccccccCcc-c----chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAG-D----LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~-~----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..+.. .    |...++..| +++.++++++ ++.+|++.     .++++++++++|+||||.+.+   +++|++
T Consensus       105 d~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~~i~~  180 (397)
T TIGR01976       105 DEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAASNTLGSIVD---LAAITE  180 (397)
T ss_pred             CEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCC---HHHHHH
Confidence            5566655422 1    234456678 9999998763 24445332     257899999999999999987   899999


Q ss_pred             HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHH--Hhh
Q 036024           73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDF--NRI  150 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~--~~~  150 (272)
                      +|+++|+++++|+++..   +..+..+..+.    ..++++|++|.+| +  |+|+++++++.+....+. ...+  ...
T Consensus       181 ~~~~~~~~~ivD~a~~~---~~~~~~~~~~~----~d~~~~s~~K~~g-~--~~G~l~~~~~~~~~l~~~-~~~~~~~~~  249 (397)
T TIGR01976       181 LVHAAGALVVVDAVHYA---PHGLIDVQATG----ADFLTCSAYKFFG-P--HMGILWGRPELLMNLPPY-KLTFSYDTG  249 (397)
T ss_pred             HHHHcCCEEEEehhhhc---cccCCCHHHcC----CCEEEEechhhcC-C--ceEEEEEcHHHHhhCCCc-cccCccCCC
Confidence            99999999999999853   11122222221    2267789999886 3  589999988774221111 0000  000


Q ss_pred             -hhhccCCcchHH---HHHHHHhcccccH-----------HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC----CCce
Q 036024          151 -ICTCFNGASNIA---QAGGLACLSSEGL-----------EAVHSVVDYYKENTKILIDTLASL-GIKVYGG----INAP  210 (272)
Q Consensus       151 -~~~~~~~~~~~~---~~a~~~~l~~~~~-----------~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~  210 (272)
                       ......+++...   ..++.+.+.+.+.           ...++.+++..+..+++++.|+++ ++++..+    ..+.
T Consensus       250 ~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~  329 (397)
T TIGR01976       250 PERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVP  329 (397)
T ss_pred             cchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCc
Confidence             000011233232   3334444433220           135677888888999999999988 4888764    2456


Q ss_pred             EEEeecCCCChHHHHHHHHHhcCeEeeCCCCCC---------CCCCCeEEEEc--cCCHHHHHHHHHHH
Q 036024          211 YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFG---------PGGEEYIRISG--FGHRESILEASRRL  268 (272)
Q Consensus       211 ~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~---------~~~~~~~R~s~--~~~~~~i~~~l~~l  268 (272)
                      ++.+.+++.+..++..+|.+ +||.+..|..|.         +...+.+|+|+  +++++|++++++.|
T Consensus       330 ~~~~~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l  397 (397)
T TIGR01976       330 TVSFTVHGLPPQRVVRRLAD-QGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL  397 (397)
T ss_pred             eEEEEeCCcCHHHHHHHHHH-CCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence            77777776556677766654 599999887664         12346899996  56999999998764

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.89  E-value=2.8e-21  Score=166.45  Aligned_cols=244  Identities=20%  Similarity=0.202  Sum_probs=176.8

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY   90 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~   90 (272)
                      |....++.| +++.+|+++++.+..| ++.  .++||++.+++.+|.||++.|   +++|+++|+++|+++++|.+++. 
T Consensus       128 w~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~-  203 (405)
T COG0520         128 WQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAA-  203 (405)
T ss_pred             HHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECcccc-
Confidence            677777889 9999999855444444 332  378999999999999999977   99999999999999999999985 


Q ss_pred             ccCCCCCCccccCCCCCceEEEecCcc-ccCCCccceeEEEecccccccCCcchHH-------------HH-Hhhhhhcc
Q 036024           91 VTDGCPRSIYEIPGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVIN-------------DF-NRIICTCF  155 (272)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~g~~g~r~G~~~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~  155 (272)
                        +..+..+..++.+    +++.|.+| .+|..|  +|.+.++++.+....+....             .+ ......-.
T Consensus       204 --~h~~idv~~l~~D----f~afsgHKwl~gP~G--iGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~  275 (405)
T COG0520         204 --GHLPIDVQELGCD----FLAFSGHKWLLGPTG--IGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEA  275 (405)
T ss_pred             --CccCCCchhcCCC----EEEEcccccccCCCc--eEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhcc
Confidence              2223344444322    89999999 666447  89999999886432111000             00 00011122


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC---CceEEEeecCCCChHHHHHHHHHh
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI---NAPYVWAHFPGRKSWDVFAEILEK  231 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~---~~~~~~i~l~~~~~~~~~~~ll~~  231 (272)
                      .+++.....++.++++-......+++.++.++..+++.+.|+++ +++++++.   .+..+.+.+++....++...|.++
T Consensus       276 gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~  355 (405)
T COG0520         276 GTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEK  355 (405)
T ss_pred             CCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhC
Confidence            23444444444444442223346889999999999999999998 79998875   477888999988888877777666


Q ss_pred             cCeEeeCCCCCCCC------CCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          232 THITTVPGSGFGPG------GEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       232 ~gi~v~~g~~~~~~------~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                       ||.++.|..|...      -+..+|+|+  ++|+||++++++.|+++
T Consensus       356 -gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~  402 (405)
T COG0520         356 -GIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKA  402 (405)
T ss_pred             -CeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence             8999999988632      244599995  78999999999999876

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.89  E-value=7.5e-22  Score=171.19  Aligned_cols=249  Identities=17%  Similarity=0.165  Sum_probs=160.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC--CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT--SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~--~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      |.|++..+++. +...+...| +++.++..+...+.-.+...  ++++++++.+++||||.+.+   +++|.++|++||+
T Consensus       118 d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~---~~~i~~l~~~~~~  194 (385)
T TIGR01825       118 DIVLSDELNHASIIDGLRLTKATKKIYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP---LPEIVELAERYGA  194 (385)
T ss_pred             CEEEEEccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccC---HHHHHHHHHHhCC
Confidence            44555555444 443444455 55554311110111102211  36788888888999999877   8899999999999


Q ss_pred             EEEEcccCCccccCCCCC-CccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh-h-ccC
Q 036024           80 IIIFDSAYAAYVTDGCPR-SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC-T-CFN  156 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~  156 (272)
                      ++|+||+|..+.++.... ....+....+++++++|+||.+|.+|   ||++++++.        .+.+..... . ...
T Consensus       195 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~--------~~~~~~~~~~~~~~~  263 (385)
T TIGR01825       195 VTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKEL--------IEYLKNRARPFLFST  263 (385)
T ss_pred             EEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHH--------HHHHHHhCccccccC
Confidence            999999998765542111 11112222467899999999998666   999888776        444443322 1 122


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeE
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHIT  235 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~  235 (272)
                      ..+++.+.++.+.++.... . .+..++++++++++.+.|+++|+++..++ +.++++.++. .+..++...|+++ ||.
T Consensus       264 ~~~~~~~~a~~~al~~~~~-~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~-gi~  339 (385)
T TIGR01825       264 AQPPAVVAALAAAVDELQR-S-PELMERLWDNTRFFKAGLGKLGYDTGGSE-TPITPVVIGDEKAAQEFSRRLFDE-GIF  339 (385)
T ss_pred             CCCHHHHHHHHHHHHHHhc-C-HHHHHHHHHHHHHHHHHHHHcCCCCCCCC-CCEEEEEECCHHHHHHHHHHHHHC-CcE
Confidence            2455666666666652111 1 34567778899999999999898887764 4466555543 2345677777777 999


Q ss_pred             eeCCCCCC--CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          236 TVPGSGFG--PGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       236 v~~g~~~~--~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      +. +..|+  +.+..++|+++  ..+++++++++++|+++
T Consensus       340 v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~  378 (385)
T TIGR01825       340 AQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKV  378 (385)
T ss_pred             Ec-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            85 44443  33457899975  57999999999999875

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.89  E-value=1.1e-21  Score=171.22  Aligned_cols=211  Identities=18%  Similarity=0.190  Sum_probs=148.8

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC-CCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA-REVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++++++||+|.+.+   +++|.++|+++++++|+||+|....+++.+..+....+. .+..++++|+||.+|.+
T Consensus       176 ~~~~~v~~~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~  252 (406)
T PRK13393        176 HRPKLVAFESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM  252 (406)
T ss_pred             CCCEEEEEcCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc
Confidence            35788889999999999988   889999999999999999999854444333332222222 22358889999999988


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhh--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICT--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g  200 (272)
                      |   ||++++++.        .+.+......  .+.+.++..+.++.+.++.... . ...+++++++.+++++.|.+.|
T Consensus       253 G---G~~~~~~~~--------~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~-~-~~~~~~~~~~~~~l~~~L~~~g  319 (406)
T PRK13393        253 G---GYITGSAAL--------CDFIRSFASGFIFTTSLPPAVAAGALASVRHLKA-S-SAERERHQDRVARLRARLDKAG  319 (406)
T ss_pred             C---ceeeCCHHH--------HHHHHHhCcCceecCccCHHHHHHHHHHHHHHhh-C-HHHHHHHHHHHHHHHHHHHHcC
Confidence            8   999887776        4555443332  2333555666667777753221 1 2234677899999999999888


Q ss_pred             CeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          201 IKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       201 ~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      +.+..+ .+.++.+.++. ....++..+|++++||.+.++.... +.+.+++|+++  ..+++|+++++++|+++
T Consensus       320 ~~~~~~-~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~  393 (406)
T PRK13393        320 IPHLPN-PSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEI  393 (406)
T ss_pred             CCcCCC-CCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            877654 45566666543 1335666777776799998865433 34557899986  56999999999999875

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.89  E-value=7.8e-22  Score=171.46  Aligned_cols=205  Identities=13%  Similarity=0.082  Sum_probs=148.2

Q ss_pred             CCceEEEEecCCCccccCCCHH-HHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQN-QLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~-~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++++++||||.+++++ .+++|.++|+++|+++|+||+|.++...+...........++    +.++||.+|.+
T Consensus       185 ~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pd----i~~~sK~lg~g  260 (396)
T PRK04073        185 PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPD----MYILGKALGGG  260 (396)
T ss_pred             cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCC----EEEecccccCC
Confidence            5778888888899999998765 599999999999999999999998655443222111111222    33589999977


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG--  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--  200 (272)
                      |+|+||++++++.        .+.+.......+++.+++++.++.+.++....   +...++.+++.+++.+.|++++  
T Consensus       261 g~~ig~~~~~~~i--------~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~  329 (396)
T PRK04073        261 VFPISCVAANRDI--------LGVFTPGSHGSTFGGNPLACAVSIAALEVLEE---EKLPERSLELGEYFKEQLKEIDNP  329 (396)
T ss_pred             CCcceEEEEcHHH--------HhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhcCC
Confidence            8999999999877        44444333444555788999888888863222   2345667778889999998763  


Q ss_pred             -CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          201 -IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       201 -~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                       +....+ .|.++++.++. ...++..+|+++ ||.+.+.      +.+++|++  +..+++++++++++|++++
T Consensus       330 ~i~~~~~-~g~~~~~~~~~-~~~~~~~~l~~~-Gv~~~~~------~~~~iRi~p~l~~t~e~i~~~~~~l~~~l  395 (396)
T PRK04073        330 MIKEVRG-RGLFIGVELNE-PARPYCEALKEE-GLLCKET------HETVIRFAPPLVITKEELDWAFEKIKAVL  395 (396)
T ss_pred             cccceec-ceEEEEEEecc-hHHHHHHHHHHC-CeEEecC------CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence             222333 47788888864 445667776655 9999753      24689999  5679999999999999874

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.89  E-value=3.4e-21  Score=166.08  Aligned_cols=241  Identities=16%  Similarity=0.143  Sum_probs=157.9

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA   89 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~   89 (272)
                      ...++..| +++.++.+++..+.++ +++    .++++++++++|+||||...+   +++|.++|+++++++|+|+++..
T Consensus        96 ~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~~livDa~~~~  172 (368)
T PRK13479         96 AQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHGKRLIVDAMSSF  172 (368)
T ss_pred             HHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcCCEEEEEccccc
Confidence            35667788 9999999765444444 322    246778999999999999988   78899999999999999977642


Q ss_pred             cccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcch-------HHHHHhh--hhhccCCcc
Q 036024           90 YVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFPV-------INDFNRI--ICTCFNGAS  159 (272)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~  159 (272)
                         +..+..+..+.  .+  ++++|++|.+ |.+|  +||++++++.+.......       ...+...  .....++++
T Consensus       173 ---g~~~~~~~~~~--~d--~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~  243 (368)
T PRK13479        173 ---GAIPIDIAELG--ID--ALISSANKCIEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPP  243 (368)
T ss_pred             ---CCccccccccC--ce--EEEecCccccccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCc
Confidence               22233333332  22  7778999975 6677  699999887732110000       0000000  011112466


Q ss_pred             hHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC---ceEEEeecCC---CChHHHHHHHHHhc
Q 036024          160 NIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLGIKVYGGIN---APYVWAHFPG---RKSWDVFAEILEKT  232 (272)
Q Consensus       160 ~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~i~l~~---~~~~~~~~~ll~~~  232 (272)
                      ...+.++.+++..... .+.++..++++++++.+++.|.++|+++..+..   ...+.+.++.   .+..++...|.++ 
T Consensus       244 ~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-  322 (368)
T PRK13479        244 THVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQ-  322 (368)
T ss_pred             HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHC-
Confidence            6665555555553222 245777899999999999999999988754321   2223334432   3456667776655 


Q ss_pred             CeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          233 HITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       233 gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ||.+.+|..+.   .+++|++.  +++++|+++++++|++++
T Consensus       323 gi~v~~g~~~~---~~~iRis~~~~~t~edi~~~l~~L~~~l  361 (368)
T PRK13479        323 GFVIYPGKLTQ---VDTFRIGCIGDVDAADIRRLVAAIAEAL  361 (368)
T ss_pred             CEEEecCCCCC---CCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence            99999876432   46899985  459999999999998763

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.89  E-value=5e-21  Score=164.60  Aligned_cols=241  Identities=15%  Similarity=0.153  Sum_probs=154.9

Q ss_pred             cccccccC-cccchHHhcccc-eeEEeecCCCCCcccCCCCC------------CCceEEEEecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQ-AGDLEDEVGKYC-NIEYLECGPGNNFFPDLKGT------------SRTDIIFFCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~-~~~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~------------~~~~~i~~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..+ ++.....++..| +++.++.++++.+.+|++.+            ++++++++++|+||||...+   +++
T Consensus        84 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~~  160 (361)
T cd06452          84 DWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AKK  160 (361)
T ss_pred             CEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HHH
Confidence            45555533 233334567788 99999998765455663331            37899999999999998755   889


Q ss_pred             HHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024           70 LVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR  149 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~  149 (272)
                      |+++|+++++++|+|++|.....   +.+...+    +..++++|+||.++ ++.|+||++++++.        .+.+..
T Consensus       161 i~~~~~~~~~~vivD~a~~~g~~---~~~~~~~----~~d~~~~s~~K~l~-~~~~~G~l~~~~~~--------~~~l~~  224 (361)
T cd06452         161 IAKVCHEYGVPLLLNGAYTVGRM---PVSGKEL----GADFIVGSGHKSMA-ASAPIGVLATTEEW--------ADIVFR  224 (361)
T ss_pred             HHHHHHHcCCeEEEECCcccCCc---CCCHHHc----CCCEEEecCCcccc-CCCCeEEEEECHHH--------HHHHhc
Confidence            99999999999999999974211   2223333    22389999999998 55699999998877        334333


Q ss_pred             hhhh------c--cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec--CCCceEEEeecCC
Q 036024          150 IICT------C--FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG--GINAPYVWAHFPG  218 (272)
Q Consensus       150 ~~~~------~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~i~l~~  218 (272)
                      ....      .  ..+.....+.++.+.+.. ..+..+ ..++..++++++++.|+++ |+++..  +..++++.++.+.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~  302 (361)
T cd06452         225 TSQMFKIKEVELLGCTLRGAPLVTLMASFPH-VKERVK-RWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPS  302 (361)
T ss_pred             cccccccceeeeeccccCchHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCC
Confidence            2211      0  011111223223333321 112222 3333445668999999998 998873  3356677676652


Q ss_pred             C---------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-cCCHHHHHHHHHHHHHh
Q 036024          219 R---------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG-FGHRESILEASRRLEAL  271 (272)
Q Consensus       219 ~---------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~~~~~~i~~~l~~l~~~  271 (272)
                      .         ...++...|+++ ||.+..     +.....+|++. ..++++++.+++.|+++
T Consensus       303 ~~~~~~~~~~~~~~~~~~L~~~-gI~~~~-----~~~~~~~ri~~~g~~~e~~~~l~~al~~~  359 (361)
T cd06452         303 FDEIAKKHKRRGYFLYSELKKR-GIHGIK-----PGLTRYFKLSTYGLTWEQVEYVVDAFKEI  359 (361)
T ss_pred             cchhhhhccccchhHHHHHHHc-CceEEc-----CCCceEEEEEecCCCHHHHHHHHHHHHHH
Confidence            1         122566767555 998532     22245899996 45999999999999875

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.89  E-value=2.2e-21  Score=167.57  Aligned_cols=252  Identities=18%  Similarity=0.131  Sum_probs=162.3

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.+.     +....+..| +++.++.+.+....++ +++  .++++++++++|+||||.+.+   +++|.++|
T Consensus        89 ~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~  165 (373)
T cd06453          89 DEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---VKEIGEIA  165 (373)
T ss_pred             CEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---HHHHHHHH
Confidence            45666554332     223445678 9999998744333333 222  258899999999999999988   78899999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHH---------
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN---------  145 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~---------  145 (272)
                      +++++++++|++|.....   +..+..+.    ..+++.|++|.++.  .++|+++++++.+....+....         
T Consensus       166 ~~~~~~li~D~a~~~~~~---~~~~~~~~----~d~~~~s~~K~~~~--~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~  236 (373)
T cd06453         166 HEAGVPVLVDGAQSAGHM---PVDVQDLG----CDFLAFSGHKMLGP--TGIGVLYGKEELLEEMPPYGGGGEMIEEVSF  236 (373)
T ss_pred             HHcCCEEEEEhhhhcCce---eeeccccC----CCEEEeccccccCC--CCcEEEEEchHHhhcCCCeecCCCccccccc
Confidence            999999999999874221   11222221    12777899999984  5589999988774322110000         


Q ss_pred             ---HHHhh-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC--CceEEEeecCC
Q 036024          146 ---DFNRI-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI--NAPYVWAHFPG  218 (272)
Q Consensus       146 ---~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~--~~~~~~i~l~~  218 (272)
                         .+... ......+++.....++.+.+........++++++.+++++++++.|.++ ++++..+.  .+.++++.+++
T Consensus       237 ~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  316 (373)
T cd06453         237 EETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEG  316 (373)
T ss_pred             cccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECC
Confidence               00000 0011123444444444444442222344778888889999999999988 68876432  35677788876


Q ss_pred             CChHHHHHHHHHhcCeEeeCCCCCCC------CCCCeEEEEcc--CCHHHHHHHHHHH
Q 036024          219 RKSWDVFAEILEKTHITTVPGSGFGP------GGEEYIRISGF--GHRESILEASRRL  268 (272)
Q Consensus       219 ~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~~R~s~~--~~~~~i~~~l~~l  268 (272)
                      .+..++...|.+ +||.+.+|..|..      ...+++|+|+.  +|++|++++++.|
T Consensus       317 ~~~~~i~~~l~~-~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l  373 (373)
T cd06453         317 IHPHDVATILDQ-YGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL  373 (373)
T ss_pred             cCHHHHHHHHHH-CCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence            555666666654 5999988876532      23578999974  6999999998764

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.88  E-value=3.4e-21  Score=166.56  Aligned_cols=204  Identities=14%  Similarity=0.143  Sum_probs=148.1

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++..+++++|.. .+++.+++|.++|++|++++|+||+|.++...+.+.+.......++    +.++||.++ +
T Consensus       166 ~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d----i~t~sK~l~-~  240 (377)
T PRK02936        166 EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD----IVTVAKGLG-N  240 (377)
T ss_pred             CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc----EEEEccccc-C
Confidence            568888888889999887 5789999999999999999999999988766554333222322233    237999999 9


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--C
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--G  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g  200 (272)
                      |+|+||++++++.        .+.+.......+.+.+++.|.++.++++....   ++..++++++.+++++.|++.  +
T Consensus       241 G~~ig~v~~~~~~--------~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~  309 (377)
T PRK02936        241 GIPVGAMIGKKEL--------GTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEH  309 (377)
T ss_pred             CCccEEEEEcHHH--------HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999998877        44444333444556889999999999874322   344566777777777777663  2


Q ss_pred             CeE---ecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          201 IKV---YGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       201 ~~~---~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      +..   .. ..|.++|+.++.. ...+.. .+.+.||.+.|+.      .+++|+++  ..+++++++++++|+++|
T Consensus       310 ~~~~~~v~-~~g~~~~i~~~~~-~~~~~~-~l~~~gv~v~~~g------~~~lRi~p~~~~~~~~i~~~i~~l~~~~  377 (377)
T PRK02936        310 LECVKNIR-GKGLMIGIECTEE-VAPVIE-QLREEGLLVLSAG------PNVIRLLPPLVVTKEELDQAVYLLKKVL  377 (377)
T ss_pred             CCcEEeEe-ecceEEEEEecch-HHHHHH-HHHHCCeEEecCC------CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence            222   22 2578999999752 444444 4555699998743      57899994  668999999999999875

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.88  E-value=3.3e-21  Score=166.76  Aligned_cols=237  Identities=17%  Similarity=0.148  Sum_probs=158.2

Q ss_pred             Hhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024           18 EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD   93 (272)
Q Consensus        18 ~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~   93 (272)
                      .++..| +++.+|.++++...++ +++  .++++++++++++||||.+++   +++|.++|+++|+++++|++++.   +
T Consensus       105 ~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~~~~~---g  178 (379)
T TIGR03402       105 HLEKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFP---IEEIGEIAKERGALFHTDAVQAV---G  178 (379)
T ss_pred             HHHHcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---HHHHHHHHHHcCCEEEEECcccc---c
Confidence            344568 9999998755333333 222  268899999999999999998   67899999999999999999974   2


Q ss_pred             CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc
Q 036024           94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE  173 (272)
Q Consensus        94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~  173 (272)
                      ..+..+..+..    -+++.|.+|.+|.+|  +|+++++++....  +........ ......+++.....++.+.++. 
T Consensus       179 ~~~~~~~~~~~----D~~~~s~~K~~gp~G--~g~l~v~~~~~~~--p~~~g~~~~-~~~~~gt~~~~~~~~l~~al~~-  248 (379)
T TIGR03402       179 KIPIDLKEMNI----DMLSLSGHKLHGPKG--VGALYIRKGTRFR--PLLRGGHQE-RGRRAGTENVPGIVGLGKAAEL-  248 (379)
T ss_pred             ccccCcccCCC----CEEEEcHHHcCCCCc--eEEEEECCCCCCC--CcccCCccC-CCcCCCCccHHHHHHHHHHHHH-
Confidence            22233333221    277888899777666  7888887654211  111000000 0112334566666655555552 


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCC---ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCC--
Q 036024          174 GLEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGIN---APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGG--  246 (272)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~--  246 (272)
                      ..+++++..++++++++++++.|++ + ++.+.++..   +..+.+.++..+..++...| +++||.+.+|..|....  
T Consensus       249 ~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~  327 (379)
T TIGR03402       249 ATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIEGEAILLLL-DMEGICASSGSACTSGSLE  327 (379)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCCHHHHHHhh-ccCCEEEEchhhcCCCCCC
Confidence            2345677888999999999999985 5 777776432   22344444554566666554 66699999998886431  


Q ss_pred             ---------------CCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          247 ---------------EEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       247 ---------------~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                                     .+.+|+|+  ++|++|++++++.|+++
T Consensus       328 ~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~  369 (379)
T TIGR03402       328 PSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPI  369 (379)
T ss_pred             cCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence                           36899996  57999999999999875

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.88  E-value=2.8e-21  Score=164.71  Aligned_cols=238  Identities=16%  Similarity=0.043  Sum_probs=157.2

Q ss_pred             cccccccCcccch-H---Hhcccc-eeEEeecCCCCCcccCCCC----C--------CCceEEEEecCCCccccCCCHHH
Q 036024            4 DSSVIVGQAGDLE-D---EVGKYC-NIEYLECGPGNNFFPDLKG----T--------SRTDIIFFCSPNNPTGHAATQNQ   66 (272)
Q Consensus         4 d~~~~~~~~~~~~-~---~~~~~g-~~~~~~~~~~~~~~~dl~~----~--------~~~~~i~~~~p~nptG~~~~~~~   66 (272)
                      |.|++..+++.+. .   .....| +++.++.+.   +.+|+++    .        ++++++++++|||| |.+++.++
T Consensus        72 d~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~  147 (338)
T cd06502          72 GSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN---GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDE  147 (338)
T ss_pred             CeEEEecCcceeeecCCcHHHHcCceEEeecCCC---CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHH
Confidence            5677666665422 1   223367 888888753   3344322    1        26899999999998 66779999


Q ss_pred             HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeE-EEecccccccCCcchHH
Q 036024           67 LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGW-TVVPEELLFSSGFPVIN  145 (272)
Q Consensus        67 l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~-~~~~~~~~~~~~~~~~~  145 (272)
                      +++|+++|+++|+++++|++|..+.......++.......+  +++.|+||.+|++|   |+ ++.+++.        ++
T Consensus       148 l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~~~~~~---g~~~~~~~~~--------~~  214 (338)
T cd06502         148 LKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVD--SVSFCLSKGGGAPV---GAVVVGNRDF--------IA  214 (338)
T ss_pred             HHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCC--EEEEeccccCCCcc---ceEEECCHHH--------HH
Confidence            99999999999999999999864322111123333322223  56889999999877   55 4456666        45


Q ss_pred             HHHhhhhh--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHH
Q 036024          146 DFNRIICT--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWD  223 (272)
Q Consensus       146 ~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~  223 (272)
                      .+......  ...+.+.+.+.++...++...+   .+..+++.++++++.+.|+++|+.+.++ .+.++.+.++..  ..
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~v~~~~~--~~  288 (338)
T cd06502         215 RARRRRKQAGGGMRQSGFLAAAGLAALENDLW---LRRLRHDHEMARRLAEALEELGGLESEV-QTNIVLLDPVEA--NA  288 (338)
T ss_pred             HHHHHHHHhCCChhhHHHHHHHHHHHhcCchH---HHHHHHHHHHHHHHHHHHHhcCCCcccc-cCCeEEEecCCc--cH
Confidence            55444322  2223556677777777764322   4556788888999999999988766554 566777777531  22


Q ss_pred             HHHHHHH------hcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHH
Q 036024          224 VFAEILE------KTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEA  270 (272)
Q Consensus       224 ~~~~ll~------~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~  270 (272)
                      ...++.+      ++|+.+.+..      .+++|++.  ..++++++++++++++
T Consensus       289 ~~~~l~~~l~~~~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~  337 (338)
T cd06502         289 VFVELSKEAIERRGEGVLFYAWG------EGGVRFVTHWDTTEEDVDELLSALKA  337 (338)
T ss_pred             HHHHHHHHHHHhhhCCEEEEecC------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence            3333332      4599987642      27899986  4589999999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PRK07179 hypothetical protein; Provisional

Probab=99.88  E-value=1.8e-21  Score=169.86  Aligned_cols=209  Identities=18%  Similarity=0.150  Sum_probs=138.4

Q ss_pred             CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCC-CceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAR-EVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~g~~g  123 (272)
                      ++++|++++++||||.+.+   +++|.++|+++|+++|+||+|....++..+.++....+.. ...+++.|+||.+| + 
T Consensus       181 ~~~lV~v~~v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~-  255 (407)
T PRK07179        181 GPGIIVVDSVYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-G-  255 (407)
T ss_pred             CCeEEEECCCCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-c-
Confidence            4678888899999999988   7889999999999999999998654443333322221221 22388999999997 2 


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhh--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICT--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI  201 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~  201 (272)
                       |+||+++++++        ++.+......  ...+.+.....++.+.++..  ...++.+++++++++++++.|.++|+
T Consensus       256 -~~G~l~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~g~  324 (407)
T PRK07179        256 -RAGIITCPREL--------AEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSELGY  324 (407)
T ss_pred             -cCeEEEeCHHH--------HHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence             58999998776        3444322221  12222333333333444321  22256788999999999999999888


Q ss_pred             eEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCC-CCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          202 KVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGF-GPGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       202 ~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~-~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      ++.+  .+.++++.++.....+.+.+.++++||.+..-... .+.+.+.+||++.  .|++|+++++++|+++
T Consensus       325 ~v~~--~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~  395 (407)
T PRK07179        325 NIRS--ESQIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREA  395 (407)
T ss_pred             CCCC--CCCEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            7763  46788888764223344444455569984311100 1223578999974  4999999999999875

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.87  E-value=2.5e-20  Score=161.01  Aligned_cols=207  Identities=14%  Similarity=0.116  Sum_probs=148.6

Q ss_pred             CCceEEEEecCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.++++..++|++|...+ .+.++++.++|+++|+++|+||+|.++...+...+.......+|    +.||||.++ +
T Consensus       164 ~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd----i~t~sK~l~-~  238 (375)
T PRK04260        164 KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD----IFTLAKGLA-N  238 (375)
T ss_pred             CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC----EEEeccccc-C
Confidence            46677888899999998754 57799999999999999999999987655443222222222334    338999998 8


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCC-
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLG-  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g-  200 (272)
                      |+|+||++++++.        .+.+.......+.+.+++.+.++.+++..... +..++.++..+..++.+.+.+.+.+ 
T Consensus       239 G~~ig~~~~~~~~--------~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  310 (375)
T PRK04260        239 GVPVGAMLAKSSL--------GGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKET  310 (375)
T ss_pred             CcceEEEEEcHHH--------HhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            9999999999877        44444333444555788899989998874332 4556666666666677777666654 


Q ss_pred             CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          201 IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       201 ~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      +.... ..|.++|++++. ...++..++.++ ||.+.|+      +.+.+|++.  ..+++++++++++|++++
T Consensus       311 ~~~~~-~~g~~~~~~~~~-~~~~~~~~l~~~-Gi~v~~~------~~~~lR~~~~~~~t~~~i~~~l~~l~~~~  375 (375)
T PRK04260        311 VTTVR-GLGYMIGIETTA-DLSQLVEAARDK-GLIVLTA------GTNVIRLLPPLTLTKEEIEQGIAILSEVF  375 (375)
T ss_pred             eeEEe-ccceEEEEEecC-cHHHHHHHHHhC-CCEEecC------CCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence            23333 378999999843 445666666555 9999764      247799996  348999999999998864

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.87  E-value=4.9e-20  Score=159.32  Aligned_cols=242  Identities=21%  Similarity=0.159  Sum_probs=160.2

Q ss_pred             Hhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024           18 EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD   93 (272)
Q Consensus        18 ~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~   93 (272)
                      .++..| +++.++.+.+....++ +++  .++++++++++|+||||.+++   +++|.++|+++|+++|+|++++.... 
T Consensus       106 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~---~~~i~~l~~~~~~~livD~a~~~g~~-  181 (376)
T TIGR01977       106 LKEQIGVEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILP---IEEIGELAQENGIFFILDAAQTAGVI-  181 (376)
T ss_pred             HHHHcCcEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCC---HHHHHHHHHHcCCEEEEEhhhccCcc-
Confidence            445568 9999988754323222 222  267899999999999999998   77889999999999999999975322 


Q ss_pred             CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchH----H-HHH---hh-hhhccCCcchHHHH
Q 036024           94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI----N-DFN---RI-ICTCFNGASNIAQA  164 (272)
Q Consensus        94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~----~-~~~---~~-~~~~~~~~~~~~~~  164 (272)
                        +..+...    +.-+++.|.+|.++.|. ..|.++.+++.........-    . .+.   .. ......+.+.....
T Consensus       182 --~~~~~~~----~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~  254 (376)
T TIGR01977       182 --PIDMTEL----AIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIA  254 (376)
T ss_pred             --CCCchhc----CCCEEEecccccccCCC-CceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHH
Confidence              1122222    12288899999875442 25777666654211111000    0 000   00 00112235555555


Q ss_pred             HHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC----CceEEEeecCCCChHHHHHHHHHhcCeEeeCC
Q 036024          165 GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI----NAPYVWAHFPGRKSWDVFAEILEKTHITTVPG  239 (272)
Q Consensus       165 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g  239 (272)
                      ++.+.++.......++++++.+++++++++.|.+. |+++..+.    .+..+++.+++.+..++...|.+++||.+.+|
T Consensus       255 a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g  334 (376)
T TIGR01977       255 GLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTG  334 (376)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcc
Confidence            55555553333445778889999999999999876 78877642    25678888877666677777766669999998


Q ss_pred             CCCCC--------CCCCeEEEEc--cCCHHHHHHHHHHHHH
Q 036024          240 SGFGP--------GGEEYIRISG--FGHRESILEASRRLEA  270 (272)
Q Consensus       240 ~~~~~--------~~~~~~R~s~--~~~~~~i~~~l~~l~~  270 (272)
                      ..|++        ...+.+|+++  .+|++|+++++++|++
T Consensus       335 ~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~  375 (376)
T TIGR01977       335 LHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE  375 (376)
T ss_pred             cccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence            77642        2457899995  5699999999999976

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.86  E-value=3.3e-20  Score=162.46  Aligned_cols=210  Identities=14%  Similarity=0.073  Sum_probs=146.9

Q ss_pred             CCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      .++.++++. ..+|+++..++++.+++|.++|+++++++|+||+|.++...+...+....    +.+..+.||||.++ +
T Consensus       198 ~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~----~~~pdi~s~sK~l~-~  272 (425)
T PRK08088        198 EDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQM----GVAADLTTFAKSIA-G  272 (425)
T ss_pred             CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhc----CCCCCEEEEecccc-C
Confidence            455666665 44888888889999999999999999999999999976554432222122    12344789999998 9


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLGI  201 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~  201 (272)
                      |+|+||+++++++        .+.+.......+.+.+++.|.++.++++.... +++++.++..+...+.+.+.+...+.
T Consensus       273 G~rig~v~~~~~~--------~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~  344 (425)
T PRK08088        273 GFPLAGVTGRAEV--------MDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPE  344 (425)
T ss_pred             CCcceeeEecHHH--------HhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999999999888        44444445556666899999999999985433 45555555555555555554444442


Q ss_pred             -eEecCCCceEEEeecCC-C--------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHH
Q 036024          202 -KVYGGINAPYVWAHFPG-R--------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLE  269 (272)
Q Consensus       202 -~~~~~~~~~~~~i~l~~-~--------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~  269 (272)
                       ....+ .|.++|+.+.. .        ...++...++++ ||.+.|+..+    .+.+|+++.  .+++++++++++|+
T Consensus       345 ~~~v~g-~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~-Gv~~~~~~~~----~~~iRl~~~~~~t~~ei~~~i~~l~  418 (425)
T PRK08088        345 IGDVRG-LGAMIAIELFEDGDHSKPNAKLTAQIVARARDK-GLILLSCGPY----YNVLRILVPLTIEDAQIRQGLEIIA  418 (425)
T ss_pred             eEEEec-cceEEEEEEecCCCCCCCCHHHHHHHHHHHHhC-CCEEecCCCC----CCEEEEECCCCcCHHHHHHHHHHHH
Confidence             22222 38899999831 1        134555555555 9988876544    368999975  47999999999998


Q ss_pred             HhC
Q 036024          270 ALF  272 (272)
Q Consensus       270 ~~l  272 (272)
                      +++
T Consensus       419 ~~l  421 (425)
T PRK08088        419 QCF  421 (425)
T ss_pred             HHH
Confidence            864

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.86  E-value=1.9e-20  Score=163.21  Aligned_cols=206  Identities=13%  Similarity=0.116  Sum_probs=140.2

Q ss_pred             CCceEEEEecCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++..++||||.+++ .+.+++|.++|++||+++|+||+|.++...+...........++  +  .++||.++.+
T Consensus       177 ~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd--~--~~~sK~l~~g  252 (400)
T PTZ00125        177 PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPD--I--VLLGKALSGG  252 (400)
T ss_pred             CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCC--E--EEEcccccCC
Confidence            57889988888999999986 45699999999999999999999987655443222211211223  2  2478999843


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      ++|+||++++++.        .+.+.......+.+.+++.+.++.+.++....   +...++.+++.+++++.|+++   
T Consensus       253 ~~~ig~v~~~~~~--------~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~---~~~~~~~~~~~~~l~~~l~~l~~~  321 (400)
T PTZ00125        253 LYPISAVLANDDV--------MLVIKPGEHGSTYGGNPLACAVAVEALEVLKE---EKLAENAQRLGEVFRDGLKELLKK  321 (400)
T ss_pred             CcCcEEEEEcHHH--------HhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhc
Confidence            3599999999887        44443333334455778888888777653221   123445555666666666553   


Q ss_pred             -CC-eEecCCCceEEEeecCC---CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          200 -GI-KVYGGINAPYVWAHFPG---RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       200 -g~-~~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                       ++ ....+ .|.++++.++.   ....++...++++ ||.+.|+.      .+++|++.  ..+++++++++++|++++
T Consensus       322 ~~~~~~~~~-~g~~~~v~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~------~~~lRi~~~~~~~~~~i~~~l~~l~~~l  393 (400)
T PTZ00125        322 SPWVKEIRG-KGLLNAIVFDHSDGVNAWDLCLKLKEN-GLLAKPTH------DNIIRFAPPLVITKEQLDQALEIIKKVL  393 (400)
T ss_pred             CCCeEEEec-ccEEEEEEEccCcchHHHHHHHHHHHC-CeEEeecC------CCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence             32 22333 67788887763   2345666777655 99998753      57899994  579999999999998753

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.86  E-value=2.4e-19  Score=150.71  Aligned_cols=253  Identities=19%  Similarity=0.232  Sum_probs=194.4

Q ss_pred             cccccCccc-chHHhcccc-eeEEeecCCCCCcccC-----CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-----LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-----l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      |+..+.|+. |.+.++++| +++.+...+...+.++     +++.++++++.++|...+||+..|   +++|+++|++|+
T Consensus        85 v~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g  161 (383)
T COG0075          85 VVVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHG  161 (383)
T ss_pred             EEeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHHHcC
Confidence            455667888 889999999 9999999988777777     555688999999999999999966   999999999999


Q ss_pred             CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecccccccCC--------cchHHHHHh
Q 036024           79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPEELLFSSG--------FPVINDFNR  149 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~--------~~~~~~~~~  149 (272)
                      +++|+|.+-+.   ++.+..+.++..+    +++++..|.+++ ||  +|.+..+++......        ..+...+..
T Consensus       162 ~l~iVDaVsS~---Gg~~~~vd~wgiD----v~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~  232 (383)
T COG0075         162 ALLIVDAVSSL---GGEPLKVDEWGID----VAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKY  232 (383)
T ss_pred             CEEEEEecccC---CCcccchhhcCcc----EEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHH
Confidence            99999999763   5556667777543    888888999974 56  688888776542111        111222222


Q ss_pred             hh--hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CceEEEeecC-CCChHH
Q 036024          150 II--CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI---NAPYVWAHFP-GRKSWD  223 (272)
Q Consensus       150 ~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~i~l~-~~~~~~  223 (272)
                      ..  ..++++++....+++.++++....+.++.+.++++++.+.+++.+.++|++.....   ......+.+| +.++.+
T Consensus       233 ~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~~~~~  312 (383)
T COG0075         233 MEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVDDKK  312 (383)
T ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCCCcHH
Confidence            21  35667788888999999998777778999999999999999999999999987722   2234556666 455556


Q ss_pred             HHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          224 VFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       224 ~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ....+++++|+.+.+|.  ++.....+||+.  ..+..++..++.+|..+|
T Consensus       313 ~~~~~~~~~g~~i~gg~--~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L  361 (383)
T COG0075         313 VRRALLKEYGVEIAGGQ--GPLKGKIFRIGHMGNVRPEDVLAALAALEAAL  361 (383)
T ss_pred             HHHHHHHhCCEEecccc--cccCccEEEEecCccCCHHHHHHHHHHHHHHH
Confidence            66689999999997765  555567899994  347889999999988764

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.85  E-value=1.8e-19  Score=155.51  Aligned_cols=247  Identities=18%  Similarity=0.139  Sum_probs=160.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      |.|++..+... +...++..| +++.+|.+++....++ +++  .++++++++++++||||.+.+   +++|.++|+++|
T Consensus       105 ~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g  181 (371)
T PRK13520        105 PNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALENG  181 (371)
T ss_pred             ceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHcC
Confidence            45555543332 666677788 9999988654333333 222  156777888889999999987   889999999999


Q ss_pred             CEEEEcccCCccccC--CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh----
Q 036024           79 SIIIFDSAYAAYVTD--GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC----  152 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~----  152 (272)
                      +++++|++|..+..+  .....+ ... ......+..|.+| |+.+|.++|+++..++.+       .+.+.....    
T Consensus       182 ~~livD~a~~~~~~~~~~~~~~~-~~~-~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~-------~~~l~~~~~~~~~  251 (371)
T PRK13520        182 IFLHVDAAFGGFVIPFLDDPPNF-DFS-LPGVDSITIDPHK-MGLAPIPAGGILFRDESY-------LDALAVDTPYLTS  251 (371)
T ss_pred             CCEEEEecchhHHHHhhcCCCCc-ccc-CCCCceEEECCcc-ccCccCCceEEEEcCHHH-------HHhhcccCccccC
Confidence            999999999865422  111111 110 1111255567788 445678899888655431       222210000    


Q ss_pred             ----hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe-EecCCCceEEEeecCCCChHHHHHH
Q 036024          153 ----TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK-VYGGINAPYVWAHFPGRKSWDVFAE  227 (272)
Q Consensus       153 ----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~i~l~~~~~~~~~~~  227 (272)
                          ....+.+.....++...+........++.+++..++++++.+.|+++|++ +..+ ...++.+.++  +..++...
T Consensus       252 ~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~v~~~~~--~~~~v~~~  328 (371)
T PRK13520        252 KKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEP-VLNIVAFDDP--NPDEVREK  328 (371)
T ss_pred             CCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCC-CceEEEEecC--CHHHHHHH
Confidence                00111233445555555554334556788899999999999999988988 4444 4567777776  45566666


Q ss_pred             HHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          228 ILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      |.++ ||.+.++.     ..+.+|+|+  .++++|++++++.|++++
T Consensus       329 L~~~-gi~v~~~~-----~~~~iRis~~~~~t~edi~~~~~~l~~~~  369 (371)
T PRK13520        329 LRER-GWRVSVTR-----CPEALRIVCMPHVTREHIENFLEDLKEVK  369 (371)
T ss_pred             HHHC-CceeccCC-----CCCEEEEEEECCCCHHHHHHHHHHHHHHh
Confidence            6655 99997643     246799986  368999999999998764

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.85  E-value=8.6e-20  Score=159.00  Aligned_cols=205  Identities=14%  Similarity=0.122  Sum_probs=145.7

Q ss_pred             CCceEEEEecCCCccccCC--CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA--TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~--~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++++|++ .|.||+|.+.  +++.+++|.++|++||+++|+||+|.++...+...........+|    +.|+||.+| 
T Consensus       182 ~~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pD----i~t~sK~l~-  255 (406)
T PRK12381        182 DQTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD----VLTTAKALG-  255 (406)
T ss_pred             CCeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCC----EEEehhhhh-
Confidence            35666666 7999998765  689999999999999999999999987765554322222222333    358999998 


Q ss_pred             CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-  200 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-  200 (272)
                      +|+|+||+++++++        .+.+.......+++.+++.+.++.+.++....   .+.+++++++.+++++.|++++ 
T Consensus       256 gG~~ig~~~~~~~~--------~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~  324 (406)
T PRK12381        256 GGFPIGAMLTTEKC--------ASVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINA  324 (406)
T ss_pred             CCCceEEEEEcHHH--------HhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHh
Confidence            89999999999887        44454434445556788888888887763221   4577889999999999998763 


Q ss_pred             -CeE-e-cCCCceEEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          201 -IKV-Y-GGINAPYVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       201 -~~~-~-~~~~~~~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                       ..+ . ....|.++++.++..   ....+.. .+.++||.+.+.      +++.+|+++  ..+++++++++++|++++
T Consensus       325 ~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~-~l~~~Gv~v~~~------g~~~lRl~p~~~~t~~~i~~~~~~l~~~l  397 (406)
T PRK12381        325 RYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQ-EAAKAGVMVLIA------GPNVVRFAPALNISEEEITTGLDRFARAC  397 (406)
T ss_pred             hCCCEEEEecCeEEEEEEecCchhhHHHHHHH-HHHHCCcEEeeC------CCCEEEEeCCccCCHHHHHHHHHHHHHHH
Confidence             221 1 123578888888642   2234444 445559999753      246899985  368999999999998764

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.85  E-value=8.2e-20  Score=158.43  Aligned_cols=251  Identities=16%  Similarity=0.142  Sum_probs=163.2

Q ss_pred             cccccccC-cccchHHhcccc-eeEEeecCCCCC------cc--cCCCCC-----C----CceEEEEecCCCcc-ccCCC
Q 036024            4 DSSVIVGQ-AGDLEDEVGKYC-NIEYLECGPGNN------FF--PDLKGT-----S----RTDIIFFCSPNNPT-GHAAT   63 (272)
Q Consensus         4 d~~~~~~~-~~~~~~~~~~~g-~~~~~~~~~~~~------~~--~dl~~~-----~----~~~~i~~~~p~npt-G~~~~   63 (272)
                      |.| +.++ |..+.......| +.+.++++++.+      |.  +|++++     +    ++++|++++||||+ |+.++
T Consensus        93 D~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s  171 (431)
T cd00617          93 RTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVS  171 (431)
T ss_pred             CEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCC
Confidence            444 3343 444777778888 999999986533      43  664431     2    37889999999998 99999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEcccCCcc--cc-----CC-CCCCccccCCCCCceEEEecCccccCCCccc------eeEE
Q 036024           64 QNQLEQLVEFARNNGSIIIFDSAYAAY--VT-----DG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVR------LGWT  129 (272)
Q Consensus        64 ~~~l~~l~~~~~~~~~~vi~D~~~~~~--~~-----~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r------~G~~  129 (272)
                      .+++++|.++|++||+++|+|+++...  .+     ++ ...++.+      .++.++|+||.+.++|+|      .||+
T Consensus       172 ~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~e------i~~e~~s~sd~~~mS~~K~~~~~~GG~i  245 (431)
T cd00617         172 MANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAE------IAREMFSYADGCTMSAKKDGLVNIGGFL  245 (431)
T ss_pred             HHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHH------HHHHhhccCCEEEEEeecCCCCccceEE
Confidence            999999999999999999999996521  11     11 1223322      224455666666666665      5799


Q ss_pred             EecccccccCCcchHHHHHhhh----hh-ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEe
Q 036024          130 VVPEELLFSSGFPVINDFNRII----CT-CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY  204 (272)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~  204 (272)
                      +++++.+       .+.+....    .. ...+.+.....|+...+.+...  .+.+.+.++ +++++.+.|.+.|+.+.
T Consensus       246 ~~~d~~l-------~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~~-~r~~l~~~L~~~G~~v~  315 (431)
T cd00617         246 ALRDDEL-------YEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRVE-QVRYLGDRLDEAGVPIV  315 (431)
T ss_pred             EeCcHHH-------HHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--HHHHHHHHH-HHHHHHHHHHHCCCCcc
Confidence            9987531       34443221    11 1122333333443334442111  122333333 55999999999999999


Q ss_pred             cCCCceEEEeecCC---------CChHHHHHHHHHhcCeEeeC-CCCC---CCC-------CCCeEEEEcc---CCHHHH
Q 036024          205 GGINAPYVWAHFPG---------RKSWDVFAEILEKTHITTVP-GSGF---GPG-------GEEYIRISGF---GHRESI  261 (272)
Q Consensus       205 ~~~~~~~~~i~l~~---------~~~~~~~~~ll~~~gi~v~~-g~~~---~~~-------~~~~~R~s~~---~~~~~i  261 (272)
                      .|.+++++|++++.         .++..++.+|+++.||.+.- |+..   .+.       ....+|+++-   -|.+++
T Consensus       316 ~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~  395 (431)
T cd00617         316 EPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHM  395 (431)
T ss_pred             CCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHH
Confidence            99999999999862         14678888999999999643 4421   121       1368999962   278888


Q ss_pred             HHHHHHHHHh
Q 036024          262 LEASRRLEAL  271 (272)
Q Consensus       262 ~~~l~~l~~~  271 (272)
                      +...++|..+
T Consensus       396 ~~~~~~~~~~  405 (431)
T cd00617         396 DYVAAAVIAL  405 (431)
T ss_pred             HHHHHHHHHH
Confidence            8888877654

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.85  E-value=1.5e-19  Score=158.21  Aligned_cols=205  Identities=18%  Similarity=0.174  Sum_probs=140.9

Q ss_pred             CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      +++++++...+|++|..+ +++.+++|.++|+++++++|+||+|.++...+...........++    +.|+||.++ +|
T Consensus       191 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d----~~t~sK~l~-~g  265 (413)
T cd00610         191 EVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPD----IVTLGKGLG-GG  265 (413)
T ss_pred             CEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCC----eEEEccccc-Cc
Confidence            455555555577889876 677799999999999999999999987643332222222221222    458899998 68


Q ss_pred             cceeEEEecccccccCCcchHHHH--HhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDF--NRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--  199 (272)
                      +|+||++++++.        ++.+  .......+.+.+++.+.++.+.++....   ++..++++++.+++++.|+++  
T Consensus       266 ~~~g~~~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~  334 (413)
T cd00610         266 LPLGAVLGREEI--------MDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAE  334 (413)
T ss_pred             cccEEEEEcHHH--------HHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh
Confidence            999999998777        4443  2333334555777888877777752221   346677888888888888765  


Q ss_pred             --CCeEecCCCceEEEeecCCC---------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHH
Q 036024          200 --GIKVYGGINAPYVWAHFPGR---------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASR  266 (272)
Q Consensus       200 --g~~~~~~~~~~~~~i~l~~~---------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~  266 (272)
                        ++.......|.++++.++..         ...++...+.++ ||.+.|+.      .+.+|+++  ..++++++++++
T Consensus       335 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gv~v~~~~------~~~lR~~~~~~~t~~~i~~~~~  407 (413)
T cd00610         335 KHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALER-GLLLRPSG------GNVIRLLPPLIITEEEIDEGLD  407 (413)
T ss_pred             hCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHC-CeEEeecC------CCEEEEECCCcCCHHHHHHHHH
Confidence              22222234578888888642         334566666555 99999875      46799985  458999999999


Q ss_pred             HHHHhC
Q 036024          267 RLEALF  272 (272)
Q Consensus       267 ~l~~~l  272 (272)
                      +|++++
T Consensus       408 ~l~~~l  413 (413)
T cd00610         408 ALDEAL  413 (413)
T ss_pred             HHHHhC
Confidence            999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK07505 hypothetical protein; Provisional

Probab=99.84  E-value=1.6e-19  Score=157.26  Aligned_cols=210  Identities=15%  Similarity=0.104  Sum_probs=134.6

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCC--CCccccCC-CCCceEEEecCccccC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP--RSIYEIPG-AREVAIEISSFSKFSG  120 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~--~~~~~~~~-~~~~~i~~~s~sK~~g  120 (272)
                      ++++++++++|+||||.+++   +++|.++|+++++++|+||+|+...++...  ........ .++++++++|+||.+|
T Consensus       178 ~~~~~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~  254 (402)
T PRK07505        178 TNKTVAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFG  254 (402)
T ss_pred             cCCCEEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhh
Confidence            45689999999999999988   788889999999999999999654333222  12223332 4678899999999999


Q ss_pred             CCccceeEEEec-ccccccCCcchHHHHHhhhhhccC--CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024          121 FTGVRLGWTVVP-EELLFSSGFPVINDFNRIICTCFN--GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA  197 (272)
Q Consensus       121 ~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~  197 (272)
                      .+|   ||++++ ++.        .+.+........+  +++.++..++.+.++....+++.+..+.++++.+.+.+.+.
T Consensus       255 ~~G---g~~~~~~~~~--------~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~  323 (402)
T PRK07505        255 ASG---GVIMLGDAEQ--------IELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIP  323 (402)
T ss_pred             ccC---eEEEeCCHHH--------HHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHH
Confidence            666   887654 444        4555443332222  23446666666666522223344555666666665544432


Q ss_pred             hCCCeEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          198 SLGIKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       198 ~~g~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      ..   . .....++.++.++.. ...++...|+++ ||.+.++..+. +.+..++|+++.  .+++|+++++++|++++
T Consensus       324 ~~---~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l  397 (402)
T PRK07505        324 TE---Q-SGSFLPIRLIYIGDEDTAIKAAKQLLDR-GFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEIL  397 (402)
T ss_pred             hc---C-CCCCCCEEEEEeCCHHHHHHHHHHHHHC-CCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHH
Confidence            21   1 111223334444421 345667777655 99999874332 223468999975  59999999999998763

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.84  E-value=3.2e-19  Score=154.06  Aligned_cols=243  Identities=18%  Similarity=0.159  Sum_probs=157.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+... |...++..| +++.++.+++  +..|++.     .+++..+++++|+||||.+.+   +++|.++|++
T Consensus       107 ~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~  181 (373)
T TIGR03812       107 PNIIVPESAHFSFEKAAEMLGLELRYAPLDED--YTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALE  181 (373)
T ss_pred             cEEEECCcchHHHHHHHHHcCCeEEEEeeCCC--CCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHH
Confidence            45666553333 667777888 9999998744  4445333     145555555568999999976   8888999999


Q ss_pred             cCCEEEEcccCCccccCC----CC-CCcc-ccCCCCCceEEEecCccccCCCccceeEEEe-cccccccCCcchHHHHHh
Q 036024           77 NGSIIIFDSAYAAYVTDG----CP-RSIY-EIPGAREVAIEISSFSKFSGFTGVRLGWTVV-PEELLFSSGFPVINDFNR  149 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~----~~-~~~~-~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~-~~~~~~~~~~~~~~~~~~  149 (272)
                      +++++++|++|..+....    .. ..+. ...+.   -.+..|.+| |++++.+.|+++. +++.+        +.+..
T Consensus       182 ~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~---d~~~~s~~K-~~~~~~~~G~~~~~~~~~~--------~~l~~  249 (373)
T TIGR03812       182 NGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGV---QSITIDPHK-MGLSPIPAGGILFRSKSYL--------KYLSV  249 (373)
T ss_pred             cCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCC---CEEEECccc-cCCCcCCceEEEEeCHHHH--------hhhcc
Confidence            999999999998654210    00 0111 01111   145567889 6567778887664 44442        22211


Q ss_pred             hhhh--------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCCh
Q 036024          150 IICT--------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKS  221 (272)
Q Consensus       150 ~~~~--------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~  221 (272)
                      ....        ...+.+.....++...++.......++..+++.++++++++.|+++|+....+...+++.+.+++  .
T Consensus       250 ~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~v~~~~~~--~  327 (373)
T TIGR03812       250 DAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEPVLNIVAFEVDD--P  327 (373)
T ss_pred             cCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCCceEEEEEeCC--H
Confidence            0000        00123345555566666644456678889999999999999999998764433356677777763  3


Q ss_pred             HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       222 ~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      .++...|.++ ||.+.++.     .++++|+++.  ++++|++++++.|+++
T Consensus       328 ~~v~~~L~~~-gi~v~~~~-----~~~~iRis~~~~~t~edid~l~~~L~~~  373 (373)
T TIGR03812       328 EEVRKKLRDR-GWYVSVTR-----CPKALRIVVMPHVTREHIEEFLEDLKEI  373 (373)
T ss_pred             HHHHHHHHHC-CceeccCC-----CCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence            4666666655 99997642     2568999964  6899999999999763

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>PLN02242 methionine gamma-lyase

Probab=99.84  E-value=4.2e-19  Score=154.35  Aligned_cols=176  Identities=17%  Similarity=0.175  Sum_probs=121.8

Q ss_pred             cccccccCccc-chHHh-----cccc-eeEEeecCCCCCcccCCCC--CC-CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEV-----GKYC-NIEYLECGPGNNFFPDLKG--TS-RTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~-----~~~g-~~~~~~~~~~~~~~~dl~~--~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..+.+. +...+     +..| +++.++.+....    +++  .+ ++|+|++++|+||||.+.+   +++|+++
T Consensus       116 D~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~----l~~~i~~~~tklV~lesp~NPtG~v~d---l~~I~~l  188 (418)
T PLN02242        116 GHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEA----VKKAVVPGKTKVLYFESISNPTLTVAD---IPELARI  188 (418)
T ss_pred             CEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHH----HHHhcCcCCCEEEEEecCCCCCCcccC---HHHHHHH
Confidence            56666665544 33322     2356 666665531111    222  14 5899999999999999975   8999999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccc-eeEEEecccccccCCcchHHHHHhhhh
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVR-LGWTVVPEELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~  152 (272)
                      |+++++++|+|++|..+.+..     ..+.    ..++++|+||.++.+|.+ .||+++++++        ++.+.....
T Consensus       189 a~~~gi~livDea~~~~~~~~-----~~~g----~divv~S~SK~l~g~g~~~gG~iv~~~~l--------i~~l~~~~~  251 (418)
T PLN02242        189 AHEKGVTVVVDNTFAPMVLSP-----ARLG----ADVVVHSISKFISGGADIIAGAVCGPAEL--------VNSMMDLHH  251 (418)
T ss_pred             HHHhCCEEEEECCCCccCCCH-----HHcC----CcEEEEeCccccCCCCCceEEEEEcCHHH--------HHHHHHHhh
Confidence            999999999999998654321     1221    238999999999878877 5999988877        445554433


Q ss_pred             --hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC
Q 036024          153 --TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG  206 (272)
Q Consensus       153 --~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~  206 (272)
                        ....+.+...|.|...+....   .+..+.++++++++.+.+.|+++++++..|
T Consensus       252 ~~~~~~g~~~~~~~A~l~~~~l~---tl~~r~~~~~~~a~~la~~L~~~~~~V~yP  304 (418)
T PLN02242        252 GALMLLGPTMNPKVAFELSERLP---HLSLRMKEHCRRAMEYAKRMKELGLKVIYP  304 (418)
T ss_pred             hhhhccCCCCCHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHHHHhCCCEEECC
Confidence              223345666677666665432   446677899999999999999988777643

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.84  E-value=2.6e-19  Score=156.03  Aligned_cols=205  Identities=13%  Similarity=0.111  Sum_probs=142.9

Q ss_pred             CCceEEEEecCCCccccCCCH-HHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQ-NQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~-~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++++|++.+|+||+|.++++ +.+++|.++|++||+++|+||+|.++...+...........+|.+  +  ++|.++ .
T Consensus       186 ~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~--~--~~K~l~-g  260 (401)
T PRK00854        186 PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVT--L--IGKALS-G  260 (401)
T ss_pred             CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEE--E--eccccc-C
Confidence            578999999999999999974 459999999999999999999998655444211111111123432  2  479997 5


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI  201 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~  201 (272)
                      | +|+||++++++.        .+.+.........+.+++.+.++.+.++....   ....++++++.+++.+.|++++.
T Consensus       261 g~~~ig~v~~~~~~--------~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~~  329 (401)
T PRK00854        261 GFYPVSAVLSNSEV--------LGVLKPGQHGSTFGGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIRS  329 (401)
T ss_pred             CccCeEEEEEcHHH--------HhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhcc
Confidence            5 799999999887        33333223333445788888888888863221   33568888899999999988753


Q ss_pred             eE---ecCCCceEEEeec-CC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          202 KV---YGGINAPYVWAHF-PG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       202 ~~---~~~~~~~~~~i~l-~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ..   ..+ .|.++.+.+ +. ....++...|+++ ||.+.+.      +.+++|++.  ..+++++++++++|++++
T Consensus       330 ~~~~~~~g-~g~~~~i~~~~~~~~~~~~~~~L~~~-GV~v~~~------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l  399 (401)
T PRK00854        330 NIVREVRG-RGLMLAVELEPEAGGARQYCEALKER-GLLAKDT------HDHTIRLAPPLVITREQVDWALEQIAKVL  399 (401)
T ss_pred             CceEEEec-cceEEEEEEecCchhHHHHHHHHHHC-CeEEecC------CCCEEEEeCCcccCHHHHHHHHHHHHHHh
Confidence            32   233 344444444 32 2456677777765 9999642      246899995  569999999999998864

>PLN00144 acetylornithine transaminase

Probab=99.84  E-value=2.9e-19  Score=154.22  Aligned_cols=203  Identities=15%  Similarity=0.181  Sum_probs=135.7

Q ss_pred             CCceEEEEecCCCccccCCCHHH--HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQ--LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~--l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      .+++++++...+|| |.+++++.  +++|.++|++||+++|+||+|.++...+...+.....-.+|    +.|+||.++ 
T Consensus       166 ~~~aavi~eP~q~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD----i~t~sK~l~-  239 (382)
T PLN00144        166 GKTAAVFVEPVQGE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD----IMTLAKPLA-  239 (382)
T ss_pred             CCeEEEEEccccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC----EEEeccccc-
Confidence            46777777745899 44444444  99999999999999999999998766654322111222344    678999998 


Q ss_pred             CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcc---cccH-HHHHHHHHHHHHHHHHHHHHHH
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLS---SEGL-EAVHSVVDYYKENTKILIDTLA  197 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~~~~-~~~~~~~~~~~~~~~~l~~~L~  197 (272)
                      +|+|+||++++++.        .+.+.......+.+.+++++.++.+.++   +... ++++++.+.+   .+.+.+.+.
T Consensus       240 ~G~pig~v~~~~~~--------~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l---~~~l~~~~~  308 (382)
T PLN00144        240 GGLPIGAVLVTEKV--------ASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYL---RELLRRKLG  308 (382)
T ss_pred             CCcceEEEEEcHHH--------HhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHH---HHHHHHHHh
Confidence            99999999999888        4444333344566688888888885554   2221 2333333333   233333444


Q ss_pred             hCC-C-eEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          198 SLG-I-KVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       198 ~~g-~-~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      +.+ + .+.+  .|.++|+.+.. ....+...+.+ +||.+.|+.   .  .+.+|++..  .+++++++++++|+++|
T Consensus       309 ~~~~~~~vrg--~G~~~~l~l~~-~~~~~~~~~~~-~Gv~i~~~~---~--~~~lrl~p~~~~~~~~i~~~~~~l~~~l  378 (382)
T PLN00144        309 GNPHVKEVRG--VGLLVGIQLDV-PAGPLVDACRD-SGLLVLTAG---K--GDVVRLVPPLVISEAELEQAVEILADCL  378 (382)
T ss_pred             hCCCceeeec--CceEEEEEecC-ccHHHHHHHHH-CCeEEeecC---C--CCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence            442 2 2333  78999999942 34566666655 499998762   1  378999963  57999999999998864

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.84  E-value=3.8e-19  Score=150.79  Aligned_cols=209  Identities=22%  Similarity=0.215  Sum_probs=156.7

Q ss_pred             ceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC--CCceEEEecCccccCCCc
Q 036024           46 TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA--REVAIEISSFSKFSGFTG  123 (272)
Q Consensus        46 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~g  123 (272)
                      .++|++...-...|.+-|   +++|++++++|++++++||+|+..++++.+..+.+..+.  .++.|.++|+||++|..|
T Consensus       172 ~~~IvtegVfSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G  248 (388)
T COG0156         172 RKLIVTEGVFSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG  248 (388)
T ss_pred             ceEEEEeccccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC
Confidence            455665588888999876   999999999999999999999988888777766654433  244799999999999888


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhhccC--CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFN--GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI  201 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~  201 (272)
                         ||+.++..+        .+.+.+......+  +.++....++.+.++..  +...+++++++++...+++.+...|+
T Consensus       249 ---g~v~g~~~~--------~d~L~~~ar~~ifStalpP~~aaa~~~al~~l--~~~~~~r~~L~~~~~~~~~~~~~~~~  315 (388)
T COG0156         249 ---GYIAGSAAL--------IDYLRNRARPFIFSTALPPAVAAAALAALRIL--EEGPERRERLQELAAFFRSLLKALGL  315 (388)
T ss_pred             ---ceeeCcHHH--------HHHHHHhCCceeccCCCCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence               999999988        5666555433222  23333334445555422  23377889999999999988888888


Q ss_pred             eEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          202 KVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       202 ~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      .+.+ ..++++.+.+.+ ....++...|+++ ||++.+..... |.+...+|+++.  .++++|++++..|.++.
T Consensus       316 ~~~~-s~s~I~pv~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~~  388 (388)
T COG0156         316 VLLP-SESPIIPVILGDEERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEVG  388 (388)
T ss_pred             ccCC-CCCCeeeeEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhhC
Confidence            8755 467777777764 3456677777777 99998877665 567789999974  48999999999998753

>PRK07049 methionine gamma-lyase; Validated

Probab=99.83  E-value=4.6e-19  Score=154.63  Aligned_cols=174  Identities=13%  Similarity=0.123  Sum_probs=123.9

Q ss_pred             cccccccCccc-chHH----hcccc-eeEEeecCCCCCcccC--CCC---CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDE----VGKYC-NIEYLECGPGNNFFPD--LKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~----~~~~g-~~~~~~~~~~~~~~~d--l~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..|.+. +...    +...| +++.++...+ -..++  ++.   .+++|+|++++|+||||.+++.+++.+|++
T Consensus       123 d~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d-~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~  201 (427)
T PRK07049        123 DVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLS-EAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVAD  201 (427)
T ss_pred             CEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCC-HHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHH
Confidence            66777776665 5444    34567 7777763221 11111  211   257999999999999999999888888888


Q ss_pred             HHHH---cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHH
Q 036024           73 FARN---NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFN  148 (272)
Q Consensus        73 ~~~~---~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~  148 (272)
                      .|++   +++++|+|++|......   .++ ..    +..+++.|+||.+| .+|+|+||+++++++        .+.+.
T Consensus       202 ~~~~~~~~~~~vvvDety~~~~~~---~pl-~~----g~divv~S~SK~~gG~~glr~G~vv~~~~l--------~~~l~  265 (427)
T PRK07049        202 AIEARQGHRPIIACDNTLLGPVFQ---KPL-EH----GADLSVYSLTKYVGGHSDLVAGAVLGRKAL--------IRQVR  265 (427)
T ss_pred             HhhhcccCCCEEEEECCccccccC---Ccc-cc----CCCEEEEcCceeecCCCCcEEEEEECCHHH--------HHHHH
Confidence            8654   68999999998753321   122 11    23488889999998 699999999988776        56666


Q ss_pred             hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          149 RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       149 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ..+.......++..+.++.+.++     .+..+.++..++++.+.+.|+++
T Consensus       266 ~~~~~~g~~ls~~~a~l~~r~L~-----tl~~R~~~~~~~a~~la~~L~~~  311 (427)
T PRK07049        266 ALRSAIGTQLDPHSCWMLGRSLE-----TLVLRMERANRNARAVAEFLRDH  311 (427)
T ss_pred             HHHHhcCCCCCHHHHHHHHcCCC-----hHHHHHHHHHHHHHHHHHHHHhC
Confidence            66665566678888887777775     23555667799999999999987

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.83  E-value=5.1e-19  Score=154.47  Aligned_cols=207  Identities=13%  Similarity=0.098  Sum_probs=141.8

Q ss_pred             CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++...++|+|..+ +++.+++|.++|++|++++|+||++.++...+.......+...+|    +.++||.++ +
T Consensus       197 ~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pD----i~t~gK~l~-~  271 (421)
T PRK09792        197 KQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPD----LMTMAKSLA-G  271 (421)
T ss_pred             CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCc----EEEeehhhc-C
Confidence            4577787776699999876 889999999999999999999999998866665444444433444    568999998 9


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh----
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS----  198 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----  198 (272)
                      |+++||+++++++.        +.+.......+++.+++++.|+.+.++....   .+..++.++..+++++.|+.    
T Consensus       272 G~pigav~~~~~i~--------~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~~  340 (421)
T PRK09792        272 GMPLSGVVGNANIM--------DAPAPGGLGGTYAGNPLAVAAAHAVLNIIDK---ESLCERANQLGQRLKNTLIDAKES  340 (421)
T ss_pred             CCceEEEEEcHHHH--------hccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999988873        3333233445566888999977777763222   12333444444444444443    


Q ss_pred             CCCeEecCCC-ceEEEeecCCC--------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHH
Q 036024          199 LGIKVYGGIN-APYVWAHFPGR--------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRR  267 (272)
Q Consensus       199 ~g~~~~~~~~-~~~~~i~l~~~--------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~  267 (272)
                      .+. +....+ |.++|+.+++.        ....+...++++ ||.+.+...    ..+.+||..  ..+++++++++++
T Consensus       341 ~p~-v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~-Gv~i~~~g~----~~~~irl~P~l~i~~~ei~~~~~~  414 (421)
T PRK09792        341 VPA-IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQ-GLLLLTCGA----YGNVIRFLYPLTIPDAQFDAAMKI  414 (421)
T ss_pred             CCC-cceecccceEEEEEecCCccCCcchHHHHHHHHHHHHC-CcEEeecCC----CCCEEEEeCCCcCCHHHHHHHHHH
Confidence            342 222334 89999999632        123455556555 999964221    147899984  3689999999999


Q ss_pred             HHHhC
Q 036024          268 LEALF  272 (272)
Q Consensus       268 l~~~l  272 (272)
                      |.+++
T Consensus       415 l~~~l  419 (421)
T PRK09792        415 LQDAL  419 (421)
T ss_pred             HHHHH
Confidence            98864

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.83  E-value=5.5e-20  Score=157.21  Aligned_cols=219  Identities=15%  Similarity=0.163  Sum_probs=148.0

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccC-CCC-C-C------CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T-S------RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD   84 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~-~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D   84 (272)
                      +...+...| +++.+|.++++...++ +++ . +      +++++++++|+||||.+.+   +++|+++|+++|+++++|
T Consensus       108 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~l~vD  184 (345)
T cd06450         108 VEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP---LEEIADLAEKYDLWLHVD  184 (345)
T ss_pred             HHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---HHHHHHHHHHhCCeEEEe
Confidence            555666678 9999999866433333 222 1 3      6788888999999999855   899999999999999999


Q ss_pred             ccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHH
Q 036024           85 SAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQA  164 (272)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (272)
                      ++|..+.......... .....+..++..|++|.++ ++.++|++..+                           ...+.
T Consensus       185 ~a~~~~~~~~~~~~~~-~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~---------------------------~~~~~  235 (345)
T cd06450         185 AAYGGFLLPFPEPRHL-DFGIERVDSISVDPHKYGL-VPLGCSAVLVR---------------------------ALKLW  235 (345)
T ss_pred             chhhHHHhhChhhHHH-hcCccccCEEEEchhHhhC-CCcchHHHHHH---------------------------HHHHH
Confidence            9998766432111100 1111122366779999776 55678875544                           23334


Q ss_pred             HHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC-----CChHHHHHHHHHhcCeEeeC
Q 036024          165 GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG-----RKSWDVFAEILEKTHITTVP  238 (272)
Q Consensus       165 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~-----~~~~~~~~~ll~~~gi~v~~  238 (272)
                      ++.+.+.   ...++++.++..++++++.+.|.++ ++.+..+..+.++.+.++.     ....++...|.++ |+.+.+
T Consensus       236 ~~l~~l~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~-g~~~~~  311 (345)
T cd06450         236 ATLRRFG---RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNER-GGWHVP  311 (345)
T ss_pred             HHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhc-CCEEEE
Confidence            4444443   2445788889999999999999987 7877664455566666654     2345666666555 655555


Q ss_pred             CCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          239 GSGFGPGGEEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       239 g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                      +..+.  +..++|+++.   ++++|++++++.|+++
T Consensus       312 ~~~~~--~~~~lRis~~~~~~t~~di~~l~~~l~~~  345 (345)
T cd06450         312 ATTLG--GPNVLRFVVTNPLTTRDDADALLEDIERA  345 (345)
T ss_pred             eeEEC--CeEEEEEEecCCCCCHHHHHHHHHHHHhC
Confidence            44332  4678999973   3899999999999864

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.83  E-value=4.2e-19  Score=154.68  Aligned_cols=249  Identities=12%  Similarity=0.107  Sum_probs=153.5

Q ss_pred             cccccccCccc-chHHhcc----cc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGK----YC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~----~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..++++ +......    .| +++.++.+++....++ +++  .++++++++++|+ |||.+.  +.+++|+++|
T Consensus       109 d~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~--~~l~~i~~la  185 (398)
T cd00613         109 NKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPN-TLGVFE--DLIKEIADIA  185 (398)
T ss_pred             CEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCCeEEEEEECCC-CCceec--chHHHHHHHH
Confidence            56777666555 5444433    33 7778887644222222 222  2678999999986 899984  3469999999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcchHH-----
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFPVIN-----  145 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~~~~-----  145 (272)
                      +++|+++|+|++|.... .  ......+    +..++++|++|.+ .|    |++.||++.+++...........     
T Consensus       186 ~~~g~~livD~~~~~~~-~--~~~~~~~----~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~  257 (398)
T cd00613         186 HSAGALVYVDGDNLNLT-G--LKPPGEY----GADIVVGNLQKTG-VPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDA  257 (398)
T ss_pred             HhcCCEEEEEecccccc-C--CCChHHc----CCCEEEeeccccC-CCCCCCCCceeEEEEhhhhHhhCCCCeecccccc
Confidence            99999999999876422 1  1111122    2338999999988 35    78899999988764321000000     


Q ss_pred             ----H----------HHhh--hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCc
Q 036024          146 ----D----------FNRI--ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINA  209 (272)
Q Consensus       146 ----~----------~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~  209 (272)
                          .          ..++  ......+.+.....++...+........++.+++++++++++++.|++++... .+.+.
T Consensus       258 ~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~  336 (398)
T cd00613         258 EGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVL-PFNGP  336 (398)
T ss_pred             CCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCC
Confidence                0          0000  00111222333333333333334445678889999999999999999985443 22222


Q ss_pred             --eEEEeecCC---CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHH
Q 036024          210 --PYVWAHFPG---RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRL  268 (272)
Q Consensus       210 --~~~~i~l~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l  268 (272)
                        ..+++.++.   .+..++...|+++ ||.+....   +.+.+.+|++.  +++++|++++++.|
T Consensus       337 ~~~~v~~~~~~~~~~~~~~~~~~L~~~-gi~~~~~~---~~~~~~lRis~~~~~t~edid~~~~~L  398 (398)
T cd00613         337 FFHEFVLRLPPLYGIRAEDLAKALIDG-GFHAPTMY---LPVDGTLMIEPTETETKEELDALLEAL  398 (398)
T ss_pred             eeEEEEEEcCCcchHHHHHHHHhhhhc-Cccccccc---cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence              235677763   2355667777655 98764321   23457899995  67999999998764

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.83  E-value=1.8e-18  Score=151.50  Aligned_cols=247  Identities=17%  Similarity=0.172  Sum_probs=153.4

Q ss_pred             cccccccCccc-ch-----HHhcccc-eeEEeecCCCCCcccCCCC----C--CCceEEEEecCCCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LE-----DEVGKYC-NIEYLECGPGNNFFPDLKG----T--SRTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~-----~~~~~~g-~~~~~~~~~~~~~~~dl~~----~--~~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      |.|++..+.+. +.     ..+...| +++.++.+.+ .+.+|++.    .  ++++++++++++||  ...+   +++|
T Consensus       112 d~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~k~v~~~~~~~~--~~~~---~~~I  185 (416)
T PRK00011        112 DTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEE-TGLIDYDEVEKLALEHKPKLIIAGASAYS--RPID---FKRF  185 (416)
T ss_pred             CEEEEeccccCCccccccccccccceeeEeecCcCcc-cCCcCHHHHHHHHHhcCCCEEEECCCcCC--CccC---HHHH
Confidence            56666655433 21     1123445 7777877643 34555333    1  37889988766655  3334   8999


Q ss_pred             HHHHHHcCCEEEEcccCCc-cccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHH
Q 036024           71 VEFARNNGSIIIFDSAYAA-YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFN  148 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~  148 (272)
                      .++|+++|+++|+|++|.. ....+.......     ...++++|+||.+  +|.|.||+++++ +.        .+.+.
T Consensus       186 ~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-----~~di~~~S~~K~l--~g~~gg~i~~~~~~~--------~~~l~  250 (416)
T PRK00011        186 REIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-----HADVVTTTTHKTL--RGPRGGLILTNDEEL--------AKKIN  250 (416)
T ss_pred             HHHHHHcCCEEEEECcchhcccccCccCCCCC-----CCcEEEecCCcCC--CCCCceEEEeCCHHH--------HHHHH
Confidence            9999999999999999863 222221111111     1127899999976  567889999975 44        45554


Q ss_pred             hhhhhccCCcc-hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCCC--ChHHH
Q 036024          149 RIICTCFNGAS-NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPGR--KSWDV  224 (272)
Q Consensus       149 ~~~~~~~~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~~--~~~~~  224 (272)
                      ........+.+ ...+.++...+.....+++++..++++++++++++.|++.|+++.. ...++++|+.+++.  +..+ 
T Consensus       251 ~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~-  329 (416)
T PRK00011        251 SAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVVSGGTDNHLVLVDLRSKGLTGKE-  329 (416)
T ss_pred             HHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeeeecCCCCeEEEEeCcccCCCHHH-
Confidence            44433222222 2233332223322222456888899999999999999999988764 22458899998632  3445 


Q ss_pred             HHHHHHhcCeEeeCCC-CC---CCCCCCeEEEEc------cCCHHHHHHHHHHHHHhC
Q 036024          225 FAEILEKTHITTVPGS-GF---GPGGEEYIRISG------FGHRESILEASRRLEALF  272 (272)
Q Consensus       225 ~~~ll~~~gi~v~~g~-~~---~~~~~~~~R~s~------~~~~~~i~~~l~~l~~~l  272 (272)
                      +.+.++++||.+..+. .+   .+..+..+|++.      ..+++|++++++.|++++
T Consensus       330 ~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~  387 (416)
T PRK00011        330 AEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVL  387 (416)
T ss_pred             HHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHH
Confidence            4445566699997432 11   122345699963      236899999999998753

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.83  E-value=5.3e-19  Score=156.16  Aligned_cols=251  Identities=16%  Similarity=0.189  Sum_probs=157.5

Q ss_pred             cccccccCccc-chHHhc----ccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVG----KYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~----~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.+. +...+.    ..| +++.+|.+++ ...++ +++  .++++++++++| ||||.+.+   +++|.++|
T Consensus       155 ~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~---l~~I~~~a  229 (447)
T PRK00451        155 KKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIED---LEEIAEIA  229 (447)
T ss_pred             CEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCC---HHHHHHHH
Confidence            55667665554 554433    357 9999998764 33333 322  268999999999 89999965   99999999


Q ss_pred             HHcCCEEEE--cccCCccccCCCCCCccccCCCCCceEEEe---cCccccCCCccceeEEEecccccccCCcchH-----
Q 036024           75 RNNGSIIIF--DSAYAAYVTDGCPRSIYEIPGAREVAIEIS---SFSKFSGFTGVRLGWTVVPEELLFSSGFPVI-----  144 (272)
Q Consensus        75 ~~~~~~vi~--D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~-----  144 (272)
                      +++|+++++  |.+....     ......+    +..++++   ++||.+.++|+++||+.++++++...-..+.     
T Consensus       230 ~~~~~~~iv~~d~~~~g~-----~~~~~~~----~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~  300 (447)
T PRK00451        230 HAGGALFIVGVDPVSLGL-----LKPPGEY----GADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVD  300 (447)
T ss_pred             HHCCCEEEEEcChHHhcc-----CCCcccC----CCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecc
Confidence            999999988  4332111     1111112    2225555   6677777788899999988877432100000     


Q ss_pred             ---------------HHHHhhhhhccCCcchHHH-HHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC
Q 036024          145 ---------------NDFNRIICTCFNGASNIAQ-AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI  207 (272)
Q Consensus       145 ---------------~~~~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~  207 (272)
                                     ...+..........+...+ .++...+.......+++.++++.++++++.+.|+++ |+++..  
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--  378 (447)
T PRK00451        301 ADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFD--  378 (447)
T ss_pred             cCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecC--
Confidence                           0011111112211222222 223223332344567899999999999999999998 677762  


Q ss_pred             CceEEE--eecCCCChHHHHHHHHHhcCeE-eeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          208 NAPYVW--AHFPGRKSWDVFAEILEKTHIT-TVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       208 ~~~~~~--i~l~~~~~~~~~~~ll~~~gi~-v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ++.+.+  +.++ ....++..+|+++ ||. ..+++.+.+...+.+|+++  .+++++++++++.|++++
T Consensus       379 ~~~~~~~~v~~~-~~~~~~~~~L~~~-gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~  446 (447)
T PRK00451        379 GPFFNEFVVRLP-KPAEEVNEALLEK-GILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL  446 (447)
T ss_pred             CCeEEEEEEecC-CCHHHHHHHHHhc-CCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            344433  5553 2557788888777 665 3455656544457899997  579999999999998764

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.83  E-value=1e-18  Score=151.41  Aligned_cols=227  Identities=14%  Similarity=0.121  Sum_probs=143.8

Q ss_pred             Hhcccc-eeEEeecCCCCCcccCCCC-------C-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEc
Q 036024           18 EVGKYC-NIEYLECGPGNNFFPDLKG-------T-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD   84 (272)
Q Consensus        18 ~~~~~g-~~~~~~~~~~~~~~~dl~~-------~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D   84 (272)
                      .++..| +++.++.+.+.++.+|++.       .     ++++++++++|+||||...+   +++|+++|+++|+++++|
T Consensus       118 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD  194 (387)
T PRK09331        118 AAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLN  194 (387)
T ss_pred             HHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEE
Confidence            356678 9999998433344455322       1     37899999999999998866   999999999999999999


Q ss_pred             ccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh--------hccC
Q 036024           85 SAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC--------TCFN  156 (272)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~  156 (272)
                      ++|+....   +.....+.    ..++++|++|+++ ++.++||++++++.+.        .+.+...        ....
T Consensus       195 ~a~~~g~~---~~~~~~~g----~D~~~~s~~K~l~-~~~~~G~l~~~~~~i~--------~~~~~~~~~~~~~~~~~~~  258 (387)
T PRK09331        195 GAYTVGRM---PVDGKKLG----ADFIVGSGHKSMA-ASAPSGVLATTEEYAD--------KVFRTSRKFGVKEVELLGC  258 (387)
T ss_pred             CCcccCCc---CCCHHHcC----CCEEEeeCccccc-CCCCEEEEEECHHHHh--------hcccccCCCcccceeeece
Confidence            99984221   22222332    2388999999997 5568999999887732        2222110        0011


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec--CCCceEEEeecCCC---------ChHHH
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG--GINAPYVWAHFPGR---------KSWDV  224 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~i~l~~~---------~~~~~  224 (272)
                      +.......++.+.+. ...+. .+..++..++.+++++.|+++ |+++..  +...+++.++.+..         ...++
T Consensus       259 ~~~~~~~~~~~aal~-~~~~~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  336 (387)
T PRK09331        259 TLRGAPLVTLMASFP-HVVER-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFL  336 (387)
T ss_pred             ecCchHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhH
Confidence            111112222222222 11122 234556678888999999999 999874  23455665665421         12345


Q ss_pred             HHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-cCCHHHHHHHHHHHHHh
Q 036024          225 FAEILEKTHITTVPGSGFGPGGEEYIRISG-FGHRESILEASRRLEAL  271 (272)
Q Consensus       225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~~~~~~i~~~l~~l~~~  271 (272)
                      ...| +++||...+     +.....+|+.. ..++++++++++.|+++
T Consensus       337 ~~~L-~~~gI~~~~-----~~~~~i~ri~~~g~t~~di~~l~~aL~~i  378 (387)
T PRK09331        337 YEEL-KKRGIHGIK-----PGATKEFKLSTYGLTWEQVEYVADAFKEI  378 (387)
T ss_pred             HHHH-HHcCceEEc-----cCCceEEEEEeccCCHHHHHHHHHHHHHH
Confidence            5555 455998433     22245567775 45999999999999875

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.83  E-value=9e-19  Score=146.30  Aligned_cols=235  Identities=18%  Similarity=0.170  Sum_probs=170.2

Q ss_pred             cccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC
Q 036024           20 GKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC   95 (272)
Q Consensus        20 ~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~   95 (272)
                      +..| ++.++|++.++-..++ +++  .+++.++.+++.||.||++.|   +++|.++|+++++++.+|-++..   +.-
T Consensus       112 e~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQp---I~ei~~i~k~~~i~fHvDAvQa~---Gki  185 (386)
T COG1104         112 ERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQP---IAEIGEICKERGILFHVDAVQAV---GKI  185 (386)
T ss_pred             HhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeeccc---HHHHHHHHHHcCCeEEEehhhhc---Cce
Confidence            4558 9999999986545554 333  288889999999999999977   99999999999999999999874   333


Q ss_pred             CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH
Q 036024           96 PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL  175 (272)
Q Consensus        96 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~  175 (272)
                      +..+..+..    .+...|.+|..|..|  +|+++.++.....++...-.+.+   .....+.+.++..+..++++ ...
T Consensus       186 pi~~~~~~v----D~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~---g~RsGTenv~~Ivg~~~A~~-~a~  255 (386)
T COG1104         186 PIDLEELGV----DLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQER---GLRSGTENVPGIVGFGKAAE-IAV  255 (386)
T ss_pred             eccccccCc----ceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCC---CCCCCCccHHHHHHHHHHHH-HHH
Confidence            344444321    166778899999888  89999866553222222222222   23334466666666666666 444


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCC---CceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCC----
Q 036024          176 EAVHSVVDYYKENTKILIDTLASL--GIKVYGGI---NAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGG----  246 (272)
Q Consensus       176 ~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~---~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~----  246 (272)
                      +.++....++++.+++|.+.|.+.  ++.+.+..   -.+.+.+.+++...+.+ ...++.+||++..|+.|....    
T Consensus       256 ~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~l-l~~L~~~gI~vStGSACsS~~~~pS  334 (386)
T COG1104         256 EELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESL-LLALDLAGIAVSTGSACSSGSLEPS  334 (386)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHH-HHhccccCeEEeccccccCCCCCcc
Confidence            666888899999999999999975  56666643   24567788888666554 445677799999999997431    


Q ss_pred             -------------CCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          247 -------------EEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       247 -------------~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                                   .+.+|||+  .++++|++.+++.|+++
T Consensus       335 hVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~  374 (386)
T COG1104         335 HVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEI  374 (386)
T ss_pred             HHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHH
Confidence                         47899998  45899999999998875

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.83  E-value=1e-18  Score=152.30  Aligned_cols=235  Identities=15%  Similarity=0.110  Sum_probs=151.9

Q ss_pred             cccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC
Q 036024           20 GKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC   95 (272)
Q Consensus        20 ~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~   95 (272)
                      +..| +++.++.++++...++ +++  .++++++++++++||||.+.+   +++|.++|+++|+++++|++++...   .
T Consensus       113 ~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~---~  186 (402)
T TIGR02006       113 EREGFEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGK---I  186 (402)
T ss_pred             HhcCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCC---c
Confidence            4557 9999998755333333 222  267899999999999999987   8899999999999999999997422   1


Q ss_pred             CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH
Q 036024           96 PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL  175 (272)
Q Consensus        96 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~  175 (272)
                      +..+..+.    ..+++.|.+|.+|.+|  +|+++++++......+. .............+++.....++.+.++. ..
T Consensus       187 ~~~~~~~~----~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~-~~g~~~~~~~~~gt~~~~~~~al~~al~~-~~  258 (402)
T TIGR02006       187 PINVNELK----VDLMSISGHKIYGPKG--IGALYVRRKPRVRLEAL-IHGGGHERGMRSGTLPTHQIVGMGEAFRI-AK  258 (402)
T ss_pred             ccCccccC----CCEEEEehhhhcCCCc--eEEEEEccCCCCCCCce-ecCCCccCCccCCCccHHHHHHHHHHHHH-HH
Confidence            22222221    2288889999888557  89988887653221110 00000000112234555555555555552 22


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC--c-eEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCC------
Q 036024          176 EAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN--A-PYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPG------  245 (272)
Q Consensus       176 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--~-~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~------  245 (272)
                      .+.++..+++++.++++++.|+++ ++.+.++..  . ....+.++.....++...+   .+|.+..|..|.+.      
T Consensus       259 ~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~  335 (402)
T TIGR02006       259 EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEGESLIMAL---KDLAVSSGSACTSASLEPSY  335 (402)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcCHHHHHHhc---CCEEEechhhcCCCCCCccH
Confidence            356778899999999999999886 676654321  1 1222334433444443332   38999888887542      


Q ss_pred             -----------CCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          246 -----------GEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       246 -----------~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                                 ..+.+|+|+  ++|++|++++++.|+++
T Consensus       336 ~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~  374 (402)
T TIGR02006       336 VLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSA  374 (402)
T ss_pred             HHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHH
Confidence                       137899996  56999999999999875

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.83  E-value=1.3e-19  Score=155.43  Aligned_cols=232  Identities=13%  Similarity=0.068  Sum_probs=153.0

Q ss_pred             HHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVT   92 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~   92 (272)
                      ..++..| +++.++.+++....++ +++  .++++++++++++||||.+++   +++|.++|+++|+++++|++++....
T Consensus       106 ~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~~g~~  182 (353)
T TIGR03235       106 RALERNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---IREIAEVLEAHEAFFHVDAAQVVGKI  182 (353)
T ss_pred             HHHHhcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---HHHHHHHHHHcCCEEEEEchhhcCCc
Confidence            3445568 9999998765434433 333  267899999999999999988   89999999999999999999874221


Q ss_pred             CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccC-CcchHHHHHhhhhhccCCcchHHHHHHHHhcc
Q 036024           93 DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS-GFPVINDFNRIICTCFNGASNIAQAGGLACLS  171 (272)
Q Consensus        93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  171 (272)
                         +..+..+    +.-+++.|.+|.+|.+|  +|+++++++..... .................+++.....++.+.++
T Consensus       183 ---~~~~~~~----~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~  253 (353)
T TIGR03235       183 ---TVDLSAD----RIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAE  253 (353)
T ss_pred             ---ccccccc----CCCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHH
Confidence               2222222    12278889999887666  79999888752111 00000000000111233455555555555555


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC---ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCC--
Q 036024          172 SEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN---APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGG--  246 (272)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~--  246 (272)
                      . .....++.+++++++.+++++.|++.|+++..+..   ..++.+.+++.+.+++...| ++ +|.+.+|..|+...  
T Consensus       254 ~-~~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L-~~-~i~v~~g~~~~~~~~~  330 (353)
T TIGR03235       254 I-ARRNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSIDGVNSEALIVNL-RA-DAAVSTGSACSSSKYE  330 (353)
T ss_pred             H-HHhhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEeCCcCHHHHHHHH-hC-CeEEEchhhcCCCCCC
Confidence            2 22456788899999999999999888998875432   33566666765655655555 66 89999999997543  


Q ss_pred             CCeEEEEccCCHHHHHH
Q 036024          247 EEYIRISGFGHRESILE  263 (272)
Q Consensus       247 ~~~~R~s~~~~~~~i~~  263 (272)
                      +.++|.+++.++++...
T Consensus       331 ~~~~l~~~g~~~~~~~~  347 (353)
T TIGR03235       331 PSHVLQAMGLDTDRARG  347 (353)
T ss_pred             CCHHHHHcCCCHHHhCc
Confidence            44778887776665544

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.83  E-value=5.1e-19  Score=153.72  Aligned_cols=205  Identities=15%  Similarity=0.144  Sum_probs=142.2

Q ss_pred             CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++++|++..++++.|... +++.+++|.++|++||+++|+||+|.++...+...........+|    +-++||.+| +
T Consensus       178 ~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pD----i~t~~K~lg-g  252 (397)
T TIGR03246       178 DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD----ILTSAKALG-G  252 (397)
T ss_pred             cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCC----EEEeehhhh-C
Confidence            4677777775566666554 789999999999999999999999987654443222222222233    237899998 8


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG--  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--  200 (272)
                      |+++||++++++.        .+.+......++++.+++++.++.+.++....   ++..++++++.+++++.|++++  
T Consensus       253 G~pigav~~~~~i--------~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~  321 (397)
T TIGR03246       253 GFPIGAMLTTTEI--------AAHLKVGTHGTTYGGNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINAR  321 (397)
T ss_pred             CcceeEEEEcHHH--------HHhccCCCcCCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999998877        44443333334445778888888888874222   4577889999999999998864  


Q ss_pred             Ce---EecCCCceEEEeecCC---CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          201 IK---VYGGINAPYVWAHFPG---RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       201 ~~---~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                      ..   ... ..|.++.+.+..   .....+...++++ |+.+.+.      +.+++|++  +..+++++++++++|++++
T Consensus       322 ~~~~~~vr-g~G~~~~i~~~~~~~~~~~~~~~~l~~~-Gv~~~~~------g~~~lR~~p~~~~t~~~i~~~~~~l~~~l  393 (397)
T TIGR03246       322 YNVFSEIR-GKGLLIGAVLTEAYQGKAKQFVNAAAEE-GVIALIA------GPNVVRFAPSLVISDDDIDEGLARFERAI  393 (397)
T ss_pred             CCCeEeee-cCceEEEEEEcCchhhHHHHHHHHHHHC-CeEEeec------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence            11   122 235555666542   2344566666655 9998753      24689995  5679999999999998764

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.82  E-value=9.7e-19  Score=152.93  Aligned_cols=207  Identities=14%  Similarity=0.122  Sum_probs=135.9

Q ss_pred             CCceEEEEecCCCccccCCCHHH-HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQ-LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.++++-..+..+|..+++++ +++|.++|++|++++|+||+|.++.+.+...+.......+|    +.++||.++ +
T Consensus       196 ~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pD----i~~lsK~l~-~  270 (420)
T TIGR00700       196 NNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPD----LITTAKSLA-D  270 (420)
T ss_pred             CcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCC----EEEeecccc-C
Confidence            45566666544777888765555 99999999999999999999998876654333333322333    346999998 9


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh----
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS----  198 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----  198 (272)
                      |+|+||+++++++        .+.+.......+.+.+++++.++.+.++....   ....++.++..+++++.|++    
T Consensus       271 G~pig~v~~~~~i--------~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~  339 (420)
T TIGR00700       271 GLPLSGVTGRAEI--------MDAPAPGGLGGTYAGNPLACAAALAVLAIIES---EGLIERARQIGRLVTDRLTTLKAV  339 (420)
T ss_pred             CcceEEEEecHHH--------HhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999887        34443334445666888999888777752112   11222333333334444333    


Q ss_pred             CC-CeEecCCCceEEEeecCCC----ChH----HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHH
Q 036024          199 LG-IKVYGGINAPYVWAHFPGR----KSW----DVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRR  267 (272)
Q Consensus       199 ~g-~~~~~~~~~~~~~i~l~~~----~~~----~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~  267 (272)
                      .+ +....+ .|.++|+.+...    .+.    .+...+ .++||.+.|+..|+    +++||++.  .+++++++++++
T Consensus       340 ~~~~~~vrg-~G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~p~~~f~----~~lRl~p~l~~~~~~l~~~~~~  413 (420)
T TIGR00700       340 DPRIGDVRG-LGAMIAVELVDPGTTEPDAGLAERIATAA-HAAGLLLLTCGMFG----NIIRFLPPLTIGDELLSEGLDI  413 (420)
T ss_pred             CCCEEEeec-cceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeEEeccCCCC----CEEEEECCCCcCHHHHHHHHHH
Confidence            23 333333 478888877321    122    233333 45599999987663    68999963  589999999999


Q ss_pred             HHHhC
Q 036024          268 LEALF  272 (272)
Q Consensus       268 l~~~l  272 (272)
                      |+++|
T Consensus       414 l~~~l  418 (420)
T TIGR00700       414 LCAIL  418 (420)
T ss_pred             HHHHh
Confidence            99875

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.81  E-value=2.9e-18  Score=149.79  Aligned_cols=208  Identities=14%  Similarity=0.080  Sum_probs=144.6

Q ss_pred             CCceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.++++...+++.|. +++++.+++|.++|++||+++|.||+|.++...+...+.......+|    +-++||.+| +
T Consensus       197 ~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pD----iv~~sK~l~-~  271 (421)
T PRK06777        197 DQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPD----LITMAKSLG-G  271 (421)
T ss_pred             CceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCC----EEeeehhhc-C
Confidence            34566666555888885 57899999999999999999999999998766654333333333344    227999999 9


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      |+|+||++++++.        .+.+.......+++.+++++.++.+.++....   +...++++++.+++++.|+++   
T Consensus       272 G~pigav~~~~~i--------~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~  340 (421)
T PRK06777        272 GMPISAVVGRAEV--------MDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKAS  340 (421)
T ss_pred             CCceEEEEEcHHH--------HhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999877        33333333445556899999999999973222   457778888888888888775   


Q ss_pred             -C-CeEecCCCceEEEeecCC----CChHHHHHHH---HHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHH
Q 036024          200 -G-IKVYGGINAPYVWAHFPG----RKSWDVFAEI---LEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRL  268 (272)
Q Consensus       200 -g-~~~~~~~~~~~~~i~l~~----~~~~~~~~~l---l~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l  268 (272)
                       + +....+.+.++ .+.+..    ....++...+   +.+.||.+.|+..|+    +++||+.  ..+++++++++++|
T Consensus       341 ~~~i~~vrg~G~~~-~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g----~~lr~~ppl~i~~~~i~~~~~~l  415 (421)
T PRK06777        341 CPAIVDIRARGSMV-AVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHG----NVIRFLYPLTIPDAQFSKALNIL  415 (421)
T ss_pred             CCCeEEecCceEEE-EEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCC----CEEEEeCCCCCCHHHHHHHHHHH
Confidence             2 22344444444 444421    1122232222   334599999987553    5899995  57999999999999


Q ss_pred             HHhC
Q 036024          269 EALF  272 (272)
Q Consensus       269 ~~~l  272 (272)
                      +++|
T Consensus       416 ~~~l  419 (421)
T PRK06777        416 TRLL  419 (421)
T ss_pred             HHHH
Confidence            8864

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.81  E-value=1.7e-18  Score=150.13  Aligned_cols=202  Identities=14%  Similarity=0.126  Sum_probs=139.8

Q ss_pred             ceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccC-CCCCceEEEecCccccCCCcc
Q 036024           46 TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIP-GAREVAIEISSFSKFSGFTGV  124 (272)
Q Consensus        46 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~  124 (272)
                      .++|++...-++.|.+.+   +++|.++|++||+++|+||+|+.+..+.....+.... ..+++.|+++||||++|..| 
T Consensus       250 ~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G-  325 (476)
T PLN02955        250 RKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG-  325 (476)
T ss_pred             ceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC-
Confidence            344444466899999988   8899999999999999999999888776555554432 23567799999999998777 


Q ss_pred             ceeEEEecccccccCCcchHHHHHhhhhhccC--CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024          125 RLGWTVVPEELLFSSGFPVINDFNRIICTCFN--GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK  202 (272)
Q Consensus       125 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~  202 (272)
                        |+++++++.        ++.+........+  ..++....++.+.++....  ....+++++++.++|++.   .|+.
T Consensus       326 --Gfi~gs~~~--------~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~--~~~~r~~L~~n~~~fr~~---~G~~  390 (476)
T PLN02955        326 --GFIACSKKW--------KQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK--EKWRRKAIWERVKEFKAL---SGVD  390 (476)
T ss_pred             --ceeecHHHH--------HHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHh---cCCC
Confidence              999998877        4555543333222  2233333344444432111  145778999999999984   3654


Q ss_pred             EecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          203 VYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       203 ~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      +    .++++.+.+... ...++..+|+++ ||.+.+..... |.+...+|++++  .+++|++++++.|+++
T Consensus       391 ~----~sPI~pI~ig~~~~a~~~~~~L~~~-Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~  458 (476)
T PLN02955        391 I----SSPIISLVVGNQEKALKASRYLLKS-GFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSC  458 (476)
T ss_pred             C----CCCEEEEEeCCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHH
Confidence            3    356777777642 334456666555 99998766554 456778999984  4899999999999865

>PLN02651 cysteine desulfurase

Probab=99.81  E-value=1.3e-18  Score=149.70  Aligned_cols=227  Identities=16%  Similarity=0.117  Sum_probs=152.7

Q ss_pred             hcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCC
Q 036024           19 VGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG   94 (272)
Q Consensus        19 ~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~   94 (272)
                      ++..| +++.++.++++...++ +++  .++++++++++++||||.+.+   +++|.++|+++|+++++|.+++..   .
T Consensus       108 ~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~g---~  181 (364)
T PLN02651        108 LQQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP---VEEIGELCREKKVLFHTDAAQAVG---K  181 (364)
T ss_pred             HHhcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc---HHHHHHHHHHcCCEEEEEcchhhC---C
Confidence            34567 8888988754333333 222  267899999999999999987   889999999999999999999842   1


Q ss_pred             CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccccc
Q 036024           95 CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEG  174 (272)
Q Consensus        95 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~  174 (272)
                      .+..+..+..    -+++.|.+|.+|.+|  +|+++++++......+.... ..........+++.....++.+.++...
T Consensus       182 ~~~~~~~~~~----D~~~~s~hK~~gp~G--~g~l~v~~~~~~~l~p~~~g-~~~~~~~~~GT~~~~~~~~l~~al~~~~  254 (364)
T PLN02651        182 IPVDVDDLGV----DLMSISGHKIYGPKG--VGALYVRRRPRVRLEPLMSG-GGQERGRRSGTENTPLVVGLGAACELAM  254 (364)
T ss_pred             cccCcccCCC----CEEEechhhhCCCCc--eEEEEEcCCCCCCCCccccC-CCccCCccCCCccHHHHHHHHHHHHHHH
Confidence            1233333322    288889999655445  89999888764322111110 0000111233466666666666665322


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCC-----ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCC--
Q 036024          175 LEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGIN-----APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPG--  245 (272)
Q Consensus       175 ~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~-----~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--  245 (272)
                       +..++.+++.++..+++++.|++ + |+++.++..     ..++.+.+++.+.+++...| ++  |.+..|+.|...  
T Consensus       255 -~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L-~~--i~v~~g~~c~~~~~  330 (364)
T PLN02651        255 -KEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGL-KE--VAVSSGSACTSASL  330 (364)
T ss_pred             -HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCCHHHHHHHh-CC--EEEEchhhcCCCCC
Confidence             23477889999999999999986 4 888887521     34677778876777766666 33  999999988543  


Q ss_pred             ---------------CCCeEEEEc--cCCHHHHH
Q 036024          246 ---------------GEEYIRISG--FGHRESIL  262 (272)
Q Consensus       246 ---------------~~~~~R~s~--~~~~~~i~  262 (272)
                                     ..+.+|+|+  ++|++|++
T Consensus       331 ~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did  364 (364)
T PLN02651        331 EPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD  364 (364)
T ss_pred             CcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence                           137899996  67888874

>PRK06460 hypothetical protein; Provisional

Probab=99.81  E-value=5.7e-18  Score=145.82  Aligned_cols=170  Identities=21%  Similarity=0.306  Sum_probs=116.0

Q ss_pred             cccccccC-----cccchHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQ-----AGDLEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~-----~~~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+     +..|...++..| +++.++.+.+ +....+. .+++|++++++|+||||.+++   +++|+++|+++
T Consensus        85 d~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~-~~l~~~~-~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~  159 (376)
T PRK06460         85 NSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSD-NIIEKAK-SKRYDVVFVENITNPLLRVVD---ITELSKVCKEN  159 (376)
T ss_pred             CEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCH-HHHHHhc-CCCceEEEEECCCCCCCcccC---HHHHHHHHHHc
Confidence            55666532     222556677888 8888877543 2211111 268899999999999999998   56789999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++|+|++|.... .  ..++ .    .+..+++.|+||.++ ..+.+.||+++++++        ++.+.........
T Consensus       160 g~~vivDea~~~~~-~--~~~l-~----~~~divv~S~sK~l~G~~~~~~G~~~~~~~l--------~~~l~~~~~~~g~  223 (376)
T PRK06460        160 GSILIVDATFSTPI-N--QKPL-E----LGADIVVHSASKFLAGHNDVIAGLAAGYGKL--------LNVIDQMRRTLGT  223 (376)
T ss_pred             CCEEEEECCcCccc-c--CChh-h----cCCCEEEeecceeccCCCCceEEEEecCHHH--------HHHHHHHHHhcCC
Confidence            99999999997521 1  1111 1    123499999999985 234689999988776        5666655544443


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ..++..   +..+++  +.++++.+.++++++++.+.+.|+++
T Consensus       224 ~~~~~~---a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~  261 (376)
T PRK06460        224 SLDPHA---AYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGH  261 (376)
T ss_pred             CCCHHH---HHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcC
Confidence            333322   222222  34667888899999999999999986

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.81  E-value=4.3e-18  Score=147.85  Aligned_cols=231  Identities=14%  Similarity=0.114  Sum_probs=150.2

Q ss_pred             eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCC
Q 036024           24 NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRS   98 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~   98 (272)
                      +.++++++.+ ...+|.+.     .+.++.+++++.+|-++ ..+   +++|.++|+++|+++++|++|.....++....
T Consensus       194 ~~~~y~vd~~-~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~~~  268 (493)
T PRK13580        194 HQRSYGVDPD-TGLLDYDEIAALAREFKPLILVAGYSAYPR-RVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKVFT  268 (493)
T ss_pred             eeEecccCcc-cCccCHHHHHHHHhhcCCEEEEeCccccCC-CcC---HHHHHHHHHHcCCEEEEECchhhceeccccch
Confidence            5566777644 33455333     25677888887766644 555   89999999999999999999986555532211


Q ss_pred             ccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHH
Q 036024           99 IYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEA  177 (272)
Q Consensus        99 ~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~  177 (272)
                       .......+.-|+++|++|++ |..   .|++.+++++        .+.+.........++.++...++...+.......
T Consensus       269 -~~~~~~~~~D~vtgT~hKaL~GP~---GG~I~~~~~l--------~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~e  336 (493)
T PRK13580        269 -GDEDPVPHADIVTTTTHKTLRGPR---GGLVLAKKEY--------ADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPE  336 (493)
T ss_pred             -hhcCCCCCCcEEEeCChhhccCCC---eEEEEecHHH--------HHHHhhCCCcccCCCccHHHHHHHHHHHHHhCcc
Confidence             00000111228899999988 533   4998888877        4555433322233333333333333333221122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCC-CCC---CCeEE
Q 036024          178 VHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFG-PGG---EEYIR  251 (272)
Q Consensus       178 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~-~~~---~~~~R  251 (272)
                      .++.++++.++.++|++.|.+.|+.+.. ...+.++++.+.+.. ....+.+.|++.||.+.+-..+. +.+   +..+|
T Consensus       337 f~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLR  416 (493)
T PRK13580        337 FQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIR  416 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEE
Confidence            3668899999999999999999998863 245788889997533 33356656777799997655443 333   67899


Q ss_pred             EEccC------CHHHHHHHHHHHHHh
Q 036024          252 ISGFG------HRESILEASRRLEAL  271 (272)
Q Consensus       252 ~s~~~------~~~~i~~~l~~l~~~  271 (272)
                      ++...      +++|++++.+.|.++
T Consensus       417 Ig~~A~ttrg~teedi~~iad~l~~~  442 (493)
T PRK13580        417 LGTPALTTLGMGSDEMDEVAELIVKV  442 (493)
T ss_pred             eccchhhhcCCCHHHHHHHHHHHHHH
Confidence            99633      578999999998765

>PLN02624 ornithine-delta-aminotransferase

Probab=99.81  E-value=1.5e-18  Score=153.51  Aligned_cols=206  Identities=14%  Similarity=0.139  Sum_probs=138.1

Q ss_pred             CCceEEEEecCCCccccCCCHHH-HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQ-LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++++|++..++|++|.++++++ +++|.++|++||+++|+||+|.++...+...........+|    +.++||.+|.+
T Consensus       223 ~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pD----iv~lsK~lggG  298 (474)
T PLN02624        223 DRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPD----VVILGKALGGG  298 (474)
T ss_pred             CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCC----EEEecccccCC
Confidence            56778888889999999887774 99999999999999999999987654443222211111222    23468999966


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG--  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--  200 (272)
                      ++++|+++.++++        ...+.......+++.+++.+.++.+.++....   ....++..++.+.+++.|.++.  
T Consensus       299 ~~pigav~~~~~i--------~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~---~~l~~~~~~~~~~l~~~L~~l~~~  367 (474)
T PLN02624        299 VIPVSAVLADKDV--------MLCIKPGEHGSTFGGNPLASAVAMAALQVVQD---EKLAERSAKLGQELRDQLQKIQKQ  367 (474)
T ss_pred             CCcceeeeecHHH--------HhHhccCCcCCCCCCCHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHh
Confidence            6999999998776        33343333344445788888888888863222   2344455566666666665531  


Q ss_pred             ----CeEecCCCceEEEeecCC-----CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024          201 ----IKVYGGINAPYVWAHFPG-----RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE  269 (272)
Q Consensus       201 ----~~~~~~~~~~~~~i~l~~-----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~  269 (272)
                          +....+ .|.+..+.+..     ....++...| .++||.+.|+.      .+.+||+.  ..+++++++++++|+
T Consensus       368 ~~~~i~~vrg-~G~~~~i~l~~~~~~~~~a~~~~~~L-~e~GV~v~p~~------~~~lR~~p~l~~t~e~id~~l~~L~  439 (474)
T PLN02624        368 FPKLIKEVRG-RGLLNAVVLNSPKLGPVSAYDVCLKL-KERGLLAKPTH------DTIIRLAPPLSISEDELQECSKALS  439 (474)
T ss_pred             CCCceEEEEe-eEEEEEEEecCCCcChHHHHHHHHHH-HhCCeEEecCC------CCEEEEECCccCCHHHHHHHHHHHH
Confidence                222333 34555555542     1234566665 45599998753      57899984  679999999999998


Q ss_pred             HhC
Q 036024          270 ALF  272 (272)
Q Consensus       270 ~~l  272 (272)
                      +++
T Consensus       440 ~~l  442 (474)
T PLN02624        440 DVL  442 (474)
T ss_pred             HHH
Confidence            764

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.81  E-value=1.8e-18  Score=152.38  Aligned_cols=205  Identities=15%  Similarity=0.181  Sum_probs=130.2

Q ss_pred             eEEEEecC-CCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcc
Q 036024           47 DIIFFCSP-NNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV  124 (272)
Q Consensus        47 ~~i~~~~p-~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~  124 (272)
                      -+.++..| +...|.+++ .+.+++|.++|++||+++|+||+|.++...+...+...++..+|    +.|+||.++ +|+
T Consensus       220 iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pD----i~t~sK~l~-~G~  294 (451)
T PRK06918        220 IAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPD----LITVSKSLG-AGV  294 (451)
T ss_pred             eEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCC----EEeeehhhc-CCC
Confidence            34444456 444466454 55599999999999999999999998876664444444433344    448999998 999


Q ss_pred             ceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh----CC
Q 036024          125 RLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS----LG  200 (272)
Q Consensus       125 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g  200 (272)
                      |+||++++++.        .+.+.......+.+.+++.+.++.+.++....   ....++.++..+++.+.|++    .+
T Consensus       295 pig~v~~~~~i--------~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~---~~~~~~~~~~g~~l~~~l~~l~~~~~  363 (451)
T PRK06918        295 PISGVIGRKEI--------MDESAPGELGGTYAGSPLGCAAALAVLDIIEK---ENLNDRAIELGKVVMNRFEEMKNKYN  363 (451)
T ss_pred             ccEEEEEcHHH--------HhccCCCCcCcCCCcCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            99999999887        33443334455666888999987777752211   11222333333344444433    22


Q ss_pred             -CeEecCCCceEEEeecCC----CCh----HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024          201 -IKVYGGINAPYVWAHFPG----RKS----WDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE  269 (272)
Q Consensus       201 -~~~~~~~~~~~~~i~l~~----~~~----~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~  269 (272)
                       +....+.++++.|....+    ..+    ..+...+ .++||.+.|+..|+    +++|+++  ..+++++++++++|+
T Consensus       364 ~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~~~~~----~~lrl~p~l~~t~~~id~~l~~l~  438 (451)
T PRK06918        364 CIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSAGTYG----NVIRVLMPLVITDEQLEEGLTIIE  438 (451)
T ss_pred             CceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeecCCCC----CEEEEECCCccCHHHHHHHHHHHH
Confidence             222334466666554321    112    2233333 45699999976553    6899996  358999999999998


Q ss_pred             HhC
Q 036024          270 ALF  272 (272)
Q Consensus       270 ~~l  272 (272)
                      +++
T Consensus       439 ~~l  441 (451)
T PRK06918        439 ESL  441 (451)
T ss_pred             HHH
Confidence            764

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.81  E-value=1.8e-18  Score=148.60  Aligned_cols=222  Identities=18%  Similarity=0.199  Sum_probs=141.8

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+.     +...+...| +++.++......    +++  .+++++|++++|+||+|.   ..++++|+++|+
T Consensus        91 d~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~----l~~~i~~~tklv~le~P~NP~~~---~~dl~~I~~la~  163 (366)
T PRK08247         91 DELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKA----IEQAITPNTKAIFIETPTNPLMQ---ETDIAAIAKIAK  163 (366)
T ss_pred             CEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHH----HHHhcccCceEEEEECCCCCCCc---HHHHHHHHHHHH
Confidence            56666665443     334455688 888887631111    222  268899999999999865   477999999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ++++++|+|++|......   .++ .    .+..++++|+||.++. ++.+.|+++++++.+       .+.+...+...
T Consensus       164 ~~g~~lIvD~t~~~~~~~---~p~-~----~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l-------~~~~~~~~~~~  228 (366)
T PRK08247        164 KHGLLLIVDNTFYTPVLQ---RPL-E----EGADIVIHSATKYLGGHNDVLAGLVVAKGQEL-------CERLAYYQNAA  228 (366)
T ss_pred             HcCCEEEEECCCcccccc---Cch-h----cCCcEEEeecceeccCCCceeeeEEecChHHH-------HHHHHHHHHhc
Confidence            999999999999532211   111 1    1234999999999973 356899988874331       45555445444


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecC-CCceEEEeecCCCChHHHHHHHHH-
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGG-INAPYVWAHFPGRKSWDVFAEILE-  230 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-~~~~~~~i~l~~~~~~~~~~~ll~-  230 (272)
                      ....+...+..+.+.++     .+..+.++.+++++.+.+.|+++ ++. +..| .+|++.| .+++   .+...++++ 
T Consensus       229 g~~~s~~~a~l~~~~l~-----tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~---~~~~~~~~~~  299 (366)
T PRK08247        229 GAVLSPFDSWLLIRGMK-----TLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQD---EEWVNPFLKS  299 (366)
T ss_pred             CCCCChHHHHHHHhccC-----cHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECC---HHHHHHHHHc
Confidence            44456666665555444     33455667799999999999987 665 4344 5676666 6653   222222222 


Q ss_pred             ------------hcCeEeeCCCCCCC-----------CCCCeEEEEccC
Q 036024          231 ------------KTHITTVPGSGFGP-----------GGEEYIRISGFG  256 (272)
Q Consensus       231 ------------~~gi~v~~g~~~~~-----------~~~~~~R~s~~~  256 (272)
                                  ..++.+.|++.+..           -+.+.+|+|+..
T Consensus       300 l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl  348 (366)
T PRK08247        300 LKLITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI  348 (366)
T ss_pred             CCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc
Confidence                        23555566654421           125689999865

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.80  E-value=1.8e-18  Score=151.74  Aligned_cols=207  Identities=18%  Similarity=0.186  Sum_probs=139.2

Q ss_pred             CCceEEEEe-cCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFC-SPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~-~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++++|++. .|+| +|.+.+ ++.+++|.++|++||+++|+||+|.++..+.. .........+|    +.+|||.+| 
T Consensus       194 ~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~-~~~~~~~~~pD----i~t~sK~l~-  266 (423)
T TIGR00713       194 EEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALG-GAQEYFGVEPD----LTTLGKIIG-  266 (423)
T ss_pred             CcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcc-hhHHHhCCCcc----hhhhhhhhc-
Confidence            467888886 7787 788887 58899999999999999999999988744321 11111222333    237999999 


Q ss_pred             CccceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHH
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLA  197 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~  197 (272)
                      +|+|+||++++++.        .+.+..   ....++++.+++++.++.+.++.... ...+..++..+..++.+.+.++
T Consensus       267 ~G~pig~v~~~~~i--------~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~  338 (423)
T TIGR00713       267 GGLPVGAFGGRREI--------MERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLE  338 (423)
T ss_pred             CCCceeeeeEHHHH--------HHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999887        444432   22334556888999988888873222 2456666667777777777777


Q ss_pred             hCCCeEecCCCceEEEeecC--CC---------Ch---HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHH
Q 036024          198 SLGIKVYGGINAPYVWAHFP--GR---------KS---WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILE  263 (272)
Q Consensus       198 ~~g~~~~~~~~~~~~~i~l~--~~---------~~---~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~  263 (272)
                      +.++.......|.++.+.+.  ..         +.   ..+...+++ +||.+.++ .|     +.+|++...+++++++
T Consensus       339 ~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~-~~-----~~~~l~~~~t~~~i~~  411 (423)
T TIGR00713       339 DTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGVFLPPS-QF-----EACFLSAAHTEEDIEN  411 (423)
T ss_pred             hcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCeEEecC-Cc-----cceeeECCCCHHHHHH
Confidence            77655422112333333332  10         11   135556665 59998653 22     3578988789999999


Q ss_pred             HHHHHHHhC
Q 036024          264 ASRRLEALF  272 (272)
Q Consensus       264 ~l~~l~~~l  272 (272)
                      ++++|++++
T Consensus       412 ~~~~l~~~l  420 (423)
T TIGR00713       412 TIEAAEEVF  420 (423)
T ss_pred             HHHHHHHHH
Confidence            999998764

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.80  E-value=1.1e-17  Score=146.58  Aligned_cols=205  Identities=13%  Similarity=0.102  Sum_probs=139.6

Q ss_pred             CCceEEEEecCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++...+||+|.+++ ++.+++|.++|++||+++|+||+|.++...+...........+| ++   ++||.+| +
T Consensus       203 ~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pD-ii---tlsK~l~-~  277 (443)
T PRK08360        203 EGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPD-II---TLGKPLG-G  277 (443)
T ss_pred             CCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCC-EE---Eeccccc-C
Confidence            56777777755899999887 55799999999999999999999998765554323222322333 22   6799999 9


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      |+|+||++++++.        .+.+.......+.+.+++.+.++.+.++....   +...++.+++.+++++.|+++   
T Consensus       278 G~pigav~~~~~i--------~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~  346 (443)
T PRK08360        278 GLPISATIGRAEI--------MDSLPPLAHAFTLSGNPVASAAALAVIEEIEE---KNLLKRAEKLGNYTKKRLEEMKKK  346 (443)
T ss_pred             CceeEEEEEcHHH--------HhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999998877        44444333445556788888888888874322   235566777777777777654   


Q ss_pred             -CCe-EecCCCceEEEeecCCC---------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHH
Q 036024          200 -GIK-VYGGINAPYVWAHFPGR---------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASR  266 (272)
Q Consensus       200 -g~~-~~~~~~~~~~~i~l~~~---------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~  266 (272)
                       ++. -.. ..|.++-+++...         ....+...+++ +||.+.+..      .+.+|++  +..++++++++++
T Consensus       347 ~~~v~~vr-g~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~------~~~lr~~P~l~~t~~~id~~~~  418 (443)
T PRK08360        347 HELIGDVR-GIGLMIGVDLVKDRETKERAYEEAAKVVWRAWE-LGLIVTFFS------GNVLRIQPPLTIEKEVLDEGLD  418 (443)
T ss_pred             CCCeeeee-ccceEEEEEEecCCcccCccHHHHHHHHHHHHH-CCeEEeecC------CCEEEEeCCCCCCHHHHHHHHH
Confidence             221 122 2466666666311         12245555555 599986432      3679996  5679999999999


Q ss_pred             HHHHhC
Q 036024          267 RLEALF  272 (272)
Q Consensus       267 ~l~~~l  272 (272)
                      +|++++
T Consensus       419 ~l~~~l  424 (443)
T PRK08360        419 ILEEAI  424 (443)
T ss_pred             HHHHHH
Confidence            998764

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.79  E-value=6.9e-18  Score=146.15  Aligned_cols=212  Identities=16%  Similarity=0.139  Sum_probs=136.5

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC---CCceEEEecCccccC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA---REVAIEISSFSKFSG  120 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~sK~~g  120 (272)
                      +++++|++.+++||+|.+.+   ++++.++|+++|+++|+||+|.....+.......+..+.   .+..+++.|+||.+|
T Consensus       137 ~~t~~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g  213 (392)
T PLN03227        137 DQRRFLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG  213 (392)
T ss_pred             CCcEEEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh
Confidence            36778888899999999988   889999999999999999999833333222223332111   133488889999887


Q ss_pred             CCccceeEEEecccccccCCcchHHHHHhhhhhccCCc--chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh
Q 036024          121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA--SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS  198 (272)
Q Consensus       121 ~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~  198 (272)
                      ..|   |+++++++.        .+.+........++.  ++..+.|+.+.+.....  .+++.++++++.+++++.|.+
T Consensus       214 ~~g---g~v~~~~~~--------~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~  280 (392)
T PLN03227        214 SVG---GMTVGSEEV--------VDHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTN  280 (392)
T ss_pred             ccC---cEEecCHHH--------HHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHh
Confidence            454   888888776        444433322222223  34455555555542221  256788899999999999986


Q ss_pred             CCCeE----------ecCCCceEEEeecCCCC----------hHHHHHHHHHhcCeEeeCCCC-----CCCCCCCeEEEE
Q 036024          199 LGIKV----------YGGINAPYVWAHFPGRK----------SWDVFAEILEKTHITTVPGSG-----FGPGGEEYIRIS  253 (272)
Q Consensus       199 ~g~~~----------~~~~~~~~~~i~l~~~~----------~~~~~~~ll~~~gi~v~~g~~-----~~~~~~~~~R~s  253 (272)
                      .+...          .....++++.+.+.+..          ..++...++++ |+.+.+...     +..-.+..+|++
T Consensus       281 ~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gi~~~~~~~~~~~~~~~~P~~~iR~~  359 (392)
T PLN03227        281 SSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSE-GVAVVSTGGHVKKFLQLVPPPCLRVV  359 (392)
T ss_pred             cCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHC-CCEEEecccccCCcCCCCCCceEEEE
Confidence            54321          12234667777775311          12555555555 999865221     111225788999


Q ss_pred             cc--CCHHHHHHHHHHHHHhC
Q 036024          254 GF--GHRESILEASRRLEALF  272 (272)
Q Consensus       254 ~~--~~~~~i~~~l~~l~~~l  272 (272)
                      +.  .|+||++++++.|++++
T Consensus       360 ~~~~~t~eei~~~~~~l~~~~  380 (392)
T PLN03227        360 ANASHTREDIDKLLTVLGEAV  380 (392)
T ss_pred             ecCCCCHHHHHHHHHHHHHHH
Confidence            74  49999999999998763

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.79  E-value=9.3e-18  Score=145.76  Aligned_cols=204  Identities=12%  Similarity=0.116  Sum_probs=142.6

Q ss_pred             CceEEEEecCCCccccCCC--HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           45 RTDIIFFCSPNNPTGHAAT--QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~~--~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +..+.++..|.+++|.+++  ++.+++|.++|++|++++|+||+|.++...+..  ....  ..+....+.|+||.+| +
T Consensus       186 ~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~--~a~~--~~~~~pdi~t~~K~l~-~  260 (408)
T PRK04612        186 GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTL--FAHW--QEQVTPDIVTLAKALG-G  260 (408)
T ss_pred             CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCch--hhhh--hcCCCCCEEEEcchhc-C
Confidence            4456677778778887766  568999999999999999999999976554422  1111  2234567889999998 9


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      |+|+||++++++.        .+.+......++++.+++.+.++.+.++....   ++..++.+++.+++++.|+++   
T Consensus       261 G~piga~~~~~~~--------~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~  329 (408)
T PRK04612        261 GFPIGAMLAGPKV--------AETMQFGAHGTTFGGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAE  329 (408)
T ss_pred             CCceEEEEECHHH--------HhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999988776        34443333445556788999988888874322   456777788888888888765   


Q ss_pred             -CCe-EecCCCceEEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          200 -GIK-VYGGINAPYVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       200 -g~~-~~~~~~~~~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                       ++. ... ..|.++.+.+...   ...++...+ .++|+.+.+.      +.+.+|+.  +..+++|+++++++|+++|
T Consensus       330 ~~~i~~vr-g~Gl~~~i~~~~~~~~~a~~i~~~l-~~~Gvlv~~~------g~~~lRl~Ppl~it~eeid~~l~~l~~~l  401 (408)
T PRK04612        330 FGVFAQVR-GRGLMLGAVLAPAHAGQAGAILDLA-AEHGLLLLQA------GPDVLRFVPALNLTDAELADGLARLRLAL  401 (408)
T ss_pred             CCCeeeee-ccceEEEEEecCchhhHHHHHHHHH-HHCCeEEeeC------CCCEEEEcCCccCCHHHHHHHHHHHHHHH
Confidence             221 122 2466766776421   233444444 4559999753      24789998  4568999999999998764

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.79  E-value=6.2e-18  Score=147.32  Aligned_cols=206  Identities=12%  Similarity=0.124  Sum_probs=140.8

Q ss_pred             CCceEEEEecCCCccccCCCHH-HHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQN-QLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~-~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.++++..+++++|...+++ .+++|.++|++|++++|+||+|.++...+..... +..+....++   ++||.++..
T Consensus       185 ~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~-~~~~~~~di~---~~gK~l~~g  260 (401)
T TIGR01885       185 PNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCV-DHENVKPDIV---LLGKALSGG  260 (401)
T ss_pred             CCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHH-hhcCCCCCEE---EeeccccCC
Confidence            4566777667899999988644 6999999999999999999999876554433222 2222222222   467999855


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK  202 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~  202 (272)
                      ++|+|+++++++.        .+.+.......+.+.+++.+.++.+.++....   +...++.+++.+++++.|++++..
T Consensus       261 ~~~ig~v~~~~~i--------~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~---~~l~~~~~~~~~~~~~~L~~l~~~  329 (401)
T TIGR01885       261 VYPVSAVLADDDV--------MLTIKPGEHGSTYGGNPLACAVAVAALEVLEE---EKLAENAEKLGEIFRDQLKKLPKP  329 (401)
T ss_pred             CCCcEEEEEcHHH--------HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhccCC
Confidence            5899999998877        33333222333445678888888888863322   234567777789999999987533


Q ss_pred             E---ecCCCceEEEeecCCC----ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          203 V---YGGINAPYVWAHFPGR----KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       203 ~---~~~~~~~~~~i~l~~~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      +   ..+ .|.+..+.++..    ...++...|.+ +||.+.|+.      .+.+||+.  ..+++++++++++|++++
T Consensus       330 ~~~~~~g-~g~~~~i~~~~~~~~~~~~~l~~~l~~-~Gv~v~~~~------~~~lRi~p~l~~t~~~i~~~l~~l~~~l  400 (401)
T TIGR01885       330 IITEVRG-RGLLNAIVIDESKTGRTAWDLCLKLKE-KGLLAKPTH------GNIIRLAPPLVITEEQLDEGLEIIKKVI  400 (401)
T ss_pred             ceeEEee-cCeeEEEEeccCcchhHHHHHHHHHHh-CCEEEEecC------CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence            3   223 455555555422    34566666654 599997643      56899995  569999999999998865

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=99.79  E-value=1.1e-18  Score=141.88  Aligned_cols=204  Identities=22%  Similarity=0.317  Sum_probs=140.6

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      +.+=+=++++||||.|.+     ++.++   +..+..+|.|-+|.+-.+.+    +....   |.-|.+.|+||.-|.+|
T Consensus       136 ~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTp----I~~~a---D~DiMLFT~SK~TGHAG  200 (363)
T PF04864_consen  136 PSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTP----ITAPA---DHDIMLFTLSKLTGHAG  200 (363)
T ss_dssp             CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS-------S-B-----SEEEEEHHHHCS-GG
T ss_pred             CCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccccc----cCCCC---CCceEEEEEecccCccc
Confidence            344556778999999987     55555   35577889999999854443    22221   22299999999999999


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH---------HHHHHHHHHHHHHHHHHHH
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL---------EAVHSVVDYYKENTKILID  194 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---------~~~~~~~~~~~~~~~~l~~  194 (272)
                      .|+||.++.++.+       ...+..+....+.+.+.=+|.-++++|.....         +..+--++.+++|.+.|++
T Consensus       201 SR~GWAlVKD~~V-------a~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~  273 (363)
T PF04864_consen  201 SRFGWALVKDEEV-------AKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRA  273 (363)
T ss_dssp             G-EEEEEES-HHH-------HHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred             cccceeeecCHHH-------HHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHH
Confidence            9999999988774       78888888888999999999988888872111         2456677899999999999


Q ss_pred             HHHhC-CCeE--ec-----------CCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHH
Q 036024          195 TLASL-GIKV--YG-----------GINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRES  260 (272)
Q Consensus       195 ~L~~~-g~~~--~~-----------~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~  260 (272)
                      .++.- -+.+  ..           .....|.|+.|...++++ +...|+++||.-+.|..|+.+ +.++|+|+-.++++
T Consensus       274 ~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~D-C~~~l~~~~I~tr~G~~fga~-~ryVRlSml~~~d~  351 (363)
T PF04864_consen  274 AVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDED-CYAVLREAKIITRSGVLFGAD-SRYVRLSMLKRDDD  351 (363)
T ss_dssp             HHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSS-HHHHHHCTTEEEEEGGGGTS--TTEEEEESSS-HHH
T ss_pred             HHHhcCceecCcCCchhccccccccCCCCCeEEEecCCccccc-HHHHHHhCCcccCCCCccCCC-CCeEEEeccCCHHH
Confidence            99874 2222  11           124569999998544333 677788889999999999874 88999999899999


Q ss_pred             HHHHHHHHHHh
Q 036024          261 ILEASRRLEAL  271 (272)
Q Consensus       261 i~~~l~~l~~~  271 (272)
                      ++.++++|..+
T Consensus       352 Fd~l~~rL~~l  362 (363)
T PF04864_consen  352 FDQLLERLSKL  362 (363)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHHhh
Confidence            99999999864

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>PRK14012 cysteine desulfurase; Provisional

Probab=99.78  E-value=2.6e-17  Score=143.63  Aligned_cols=249  Identities=14%  Similarity=0.110  Sum_probs=150.0

Q ss_pred             cccccccCccc-chH---Hhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LED---EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~---~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++.+.... ...   .++..| +++.++.+++....++ +++  .++++++++++++||||.+.+   +++|.++|+
T Consensus        95 d~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~~I~~la~  171 (404)
T PRK14012         95 KHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQD---IAAIGEICR  171 (404)
T ss_pred             CEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhh---HHHHHHHHH
Confidence            45555544332 222   223457 8999988755333333 333  267899999999999999976   889999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      ++++++++|++++...   .+..+..+.  .|  +++.|++|.+| |+ .+|+++++++......+.... .........
T Consensus       172 ~~g~~vivD~a~~~g~---~~~~~~~~~--~D--~~~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g-~~~~~~~~~  241 (404)
T PRK14012        172 ERGIIFHVDAAQSVGK---VPIDLSKLK--VD--LMSFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHG-GGHERGMRS  241 (404)
T ss_pred             HcCCEEEEEcchhcCC---cccCcccCC--CC--EEEEehhhccC-CC-ceEEEEEecCCCCCCCceecC-CCccCCccC
Confidence            9999999999997421   122222221  22  77779999887 43 489998887653211110000 000000111


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC-----CceEEEeecCCCChHHHHHHHH
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI-----NAPYVWAHFPGRKSWDVFAEIL  229 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-----~~~~~~i~l~~~~~~~~~~~ll  229 (272)
                      .+.+.....+..+.+... ....++..++.++.++++.+.|+++ ++.+.++.     ....+++.+.  +..++...+ 
T Consensus       242 gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l-  317 (404)
T PRK14012        242 GTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV--EGESLIMAL-  317 (404)
T ss_pred             CCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc--CHHHHHHhC-
Confidence            123333333333333311 2234567788889999999999876 56654321     1224555543  223444333 


Q ss_pred             HhcCeEeeCCCCCCCC-----------------CCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          230 EKTHITTVPGSGFGPG-----------------GEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~~-----------------~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                       + ++.+.+|..|.+.                 ..+.+|+++  .++++|++++++.|+++
T Consensus       318 -~-~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~  376 (404)
T PRK14012        318 -K-DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKS  376 (404)
T ss_pred             -C-CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHH
Confidence             2 7888788777532                 137899997  46899999999999875

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.78  E-value=1.6e-16  Score=136.50  Aligned_cols=234  Identities=15%  Similarity=0.163  Sum_probs=148.0

Q ss_pred             cccccccCcc-cchHH----hcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAG-DLEDE----VGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~-~~~~~----~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+ .+...    ++..| +++.++.+++..     ...++++++++++|+||||.+.+   +++|+++|+++
T Consensus        90 d~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~-----~~~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~  161 (366)
T PRK07582         90 DTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE-----AALAGADLVLAETPSNPGLDVCD---LAALAAAAHAA  161 (366)
T ss_pred             CEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH-----HhccCceEEEEECCCCCCCCccC---HHHHHHHHHHc
Confidence            5667765433 44433    34578 999998864421     22368899999999999998765   99999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++|+|++|... .+  ..++ .+.  .|  ++++|+||.++ .+|+|+||++++++.+       .+.+...+.....
T Consensus       162 g~~lvVD~t~~~~-~~--~~p~-~~g--~D--ivv~S~sK~l~G~~g~~~G~v~~~~~~l-------~~~l~~~~~~~g~  226 (366)
T PRK07582        162 GALLVVDNTTATP-LG--QRPL-ELG--AD--LVVASDTKALTGHSDLLLGYVAGRDPEL-------MAAVERWRLLAGA  226 (366)
T ss_pred             CCEEEEECCCCCc-cc--cCch-hcC--Cc--EEEecccccccCCCCeeEEEEEcCcHHH-------HHHHHHHHHHhCC
Confidence            9999999998631 11  1122 221  12  78899999884 5789999999864432       4555555544444


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-Ee--c----C----------CCceEEEeecCC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VY--G----G----------INAPYVWAHFPG  218 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~--~----~----------~~~~~~~i~l~~  218 (272)
                      .+++.....+...++     .+..+.++.++++..+.+.|+++ .+. +.  +    |          ..|..+.+.++ 
T Consensus       227 ~~~~~~a~l~~r~l~-----tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-  300 (366)
T PRK07582        227 IPGPFEAWLAHRSLG-----TLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-  300 (366)
T ss_pred             CCCHHHHHHHHhccc-----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-
Confidence            455555444444443     33556678889999999999987 332 22  1    1          13556777885 


Q ss_pred             CChHHHHHHHHHhcCeEeeCCCCCCC--------------CCCCeEEEEccC--CHHHHHHHHHHHH
Q 036024          219 RKSWDVFAEILEKTHITTVPGSGFGP--------------GGEEYIRISGFG--HRESILEASRRLE  269 (272)
Q Consensus       219 ~~~~~~~~~ll~~~gi~v~~g~~~~~--------------~~~~~~R~s~~~--~~~~i~~~l~~l~  269 (272)
                       + .+...+.+++.++... +.++|.              ...+.+|+|+..  +++.++.+.++|+
T Consensus       301 -~-~~~~~~~~~~l~~~~~-~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~  364 (366)
T PRK07582        301 -D-AAAAERFVAASRLVVA-ATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD  364 (366)
T ss_pred             -C-HHHHHHHHHhCCccee-cccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence             2 3445566666665442 222221              124689999754  3444555555554

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.77  E-value=7.4e-17  Score=138.90  Aligned_cols=223  Identities=18%  Similarity=0.204  Sum_probs=140.6

Q ss_pred             hcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCC
Q 036024           19 VGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR   97 (272)
Q Consensus        19 ~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~   97 (272)
                      +...| ++..++.+....+.-.+  .+++++|++.+|+||+|.+.+   +++|+++|+++|+++|+|++|......   .
T Consensus       100 ~~~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~---~  171 (369)
T cd00614         100 LPKLGIEVTFVDPDDPEALEAAI--KPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ---R  171 (369)
T ss_pred             HhhcCeEEEEeCCCCHHHHHHhc--CCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC---C
Confidence            45677 88887765211111112  157899999999999999987   889999999999999999999753321   1


Q ss_pred             CccccCCCCCceEEEecCccccCCCc-cceeEEEecc-cccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH
Q 036024           98 SIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPE-ELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL  175 (272)
Q Consensus        98 ~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~  175 (272)
                      ++ .+    +..+++.|++|.+|.+| .+.||+++++ ++        .+.+...........++....++...++    
T Consensus       172 ~~-~~----g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l--------~~~l~~~~~~~g~~~~p~~a~~~l~~l~----  234 (369)
T cd00614         172 PL-EL----GADIVVHSATKYIGGHSDVIAGVVVGSGEAL--------IQRLRFLRLALGTILSPFDAWLLLRGLK----  234 (369)
T ss_pred             hh-hh----CCcEEEeccceeccCCCCceEEEEEeCcHHH--------HHHHHHHHHhhCCCCCHHHHHHHHcCCC----
Confidence            11 22    12388999999997555 7889999987 55        5555555443444455555444444443    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCC-Ce-EecC----------------CCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024          176 EAVHSVVDYYKENTKILIDTLASLG-IK-VYGG----------------INAPYVWAHFPGRKSWDVFAEILEKTHITTV  237 (272)
Q Consensus       176 ~~~~~~~~~~~~~~~~l~~~L~~~g-~~-~~~~----------------~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~  237 (272)
                       .+..+.++..++++.+.+.|++++ +. +..|                ..|.++.+.+++  +.+...++++.-.+.- 
T Consensus       235 -tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~--~~~~~~~f~~~l~~~~-  310 (369)
T cd00614         235 -TLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG--GLEAAKKFLNALKLFS-  310 (369)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC--CHHHHHHHHHcCCcce-
Confidence             335567888999999999999874 32 2222                246677788864  2333444555444431 


Q ss_pred             CCCCCC----------------C---------CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          238 PGSGFG----------------P---------GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       238 ~g~~~~----------------~---------~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+.++|                .         -.++.+|+|+..  |+.+.++..|+++|
T Consensus       311 ~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl--E~~~dl~~dl~~al  368 (369)
T cd00614         311 LAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI--EDVEDLIADLEQAL  368 (369)
T ss_pred             EcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence            111111                0         014689999865  34555566666553

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>TIGR01814 kynureninase kynureninase

Probab=99.77  E-value=7.8e-17  Score=140.66  Aligned_cols=233  Identities=12%  Similarity=0.084  Sum_probs=147.1

Q ss_pred             Hhcccc-ee----EEeecCCCCCcccC-CCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 036024           18 EVGKYC-NI----EYLECGPGNNFFPD-LKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA   86 (272)
Q Consensus        18 ~~~~~g-~~----~~~~~~~~~~~~~d-l~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~   86 (272)
                      .++..| ++    ++++.+.++...++ ++.     .++++++++++++|.||.+.+   +++|+++|+++|+++++|++
T Consensus       133 ~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~a  209 (406)
T TIGR01814       133 QLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLA  209 (406)
T ss_pred             HHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcc
Confidence            345667 66    45555433222332 222     268999999999999999987   99999999999999999999


Q ss_pred             CCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhh---------------
Q 036024           87 YAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRI---------------  150 (272)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~---------------  150 (272)
                      ++...   .+..+..+.    .-++++|.+|.++ .||  .|..+.++.. ....+.... +...               
T Consensus       210 q~~G~---~~id~~~~g----vD~~~~s~hK~l~g~pG--~~l~v~~~~~-~~~~p~~~g-~~~~~~~~~~~~~~~~~~~  278 (406)
T TIGR01814       210 HAVGN---VPLDLHDWG----VDFACWCTYKYLNAGPG--AGAFVHEKHA-HTERPRLAG-WWGHARPTRFKMDNTLGLI  278 (406)
T ss_pred             cccCC---cccccccCC----CCEEEEcCccccCCCCC--eEEEEehhhh-hhcCCCCCc-ccCCCCccccccccccCCC
Confidence            98622   122333332    2289999999873 455  3433333322 111111000 0000               


Q ss_pred             -hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEecCCC----ceEEEeecCCCC
Q 036024          151 -ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-----GIKVYGGIN----APYVWAHFPGRK  220 (272)
Q Consensus       151 -~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~~~~----~~~~~i~l~~~~  220 (272)
                       ......+++.....++.++++.......++.+++.++..+++++.|++.     |+++.++..    +..+.+.++ ..
T Consensus       279 ~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~  357 (406)
T TIGR01814       279 PCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP  357 (406)
T ss_pred             ccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC
Confidence             0011234566665655556653323345788899999999999999874     377776532    345667776 45


Q ss_pred             hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc---cCCHHHHHHHHHHHHHhC
Q 036024          221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG---FGHRESILEASRRLEALF  272 (272)
Q Consensus       221 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~---~~~~~~i~~~l~~l~~~l  272 (272)
                      ..++...|.+ +||.+...      ..+.+|+|+   +++++|+++++++|++++
T Consensus       358 ~~~~~~~L~~-~gi~v~~~------~~~~iRiS~~~~~nt~~did~l~~~l~~~~  405 (406)
T TIGR01814       358 GKAVFQALIK-RGVIGDKR------EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL  405 (406)
T ss_pred             HHHHHHHHHH-CCEEEecc------CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence            5666666654 59987521      246899995   569999999999998764

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.76  E-value=7.9e-17  Score=138.92  Aligned_cols=201  Identities=15%  Similarity=0.119  Sum_probs=122.4

Q ss_pred             CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcc
Q 036024           45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV  124 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~  124 (272)
                      +++++++++++|+||.+.|   +++|.++|+++|+++++|++|+....+..........+..+..+.+.|+||.+|..| 
T Consensus       143 ~~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G-  218 (370)
T PRK05937        143 GRIFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG-  218 (370)
T ss_pred             CcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc-
Confidence            3456677899999999988   889999999999999999999864444332222211122233367899999999767 


Q ss_pred             ceeEEEecccccccCCcchHHHHHhh--hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024          125 RLGWTVVPEELLFSSGFPVINDFNRI--ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK  202 (272)
Q Consensus       125 r~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~  202 (272)
                        +.++..++.        ...+...  ......+.+++...++.++++.. .+..+..++++++.++++++.|...+. 
T Consensus       219 --~~vl~~~~~--------~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l-~~~~~~~~~~l~~l~~~l~~~l~~~~~-  286 (370)
T PRK05937        219 --AALLSSSEV--------KQDLMLNSPPLRYSTGLPPHLLISIQVAYDFL-SQEGELARKQLFRLKEYFAQKFSSAAP-  286 (370)
T ss_pred             --eEEEcCHHH--------HHHHHHhCCCCeecCCCCHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHhcCCCCC-
Confidence              334444443        2222211  11122234555555444444311 111244567888888888887764321 


Q ss_pred             EecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          203 VYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       203 ~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                            +....+.+++....++... ++++||.+..  .+.+ ..+.+|+|+  ++|++|++++++.|+++
T Consensus       287 ------~~~~~i~~~~~~~~~~~~~-L~~~gi~v~~--~~~~-~~~~iRis~~~~~t~edid~l~~~L~~~  347 (370)
T PRK05937        287 ------GCVQPIFLPGISEQELYSK-LVETGIRVGV--VCFP-TGPFLRVNLHAFNTEDEVDILVSVLATY  347 (370)
T ss_pred             ------CCEEEEEeCChhHHHHHHH-HHHCCeeEEe--eCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence                  1112244554444454444 4555998863  2222 246899997  47999999999999875

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.76  E-value=8.5e-17  Score=138.88  Aligned_cols=236  Identities=20%  Similarity=0.244  Sum_probs=160.3

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV   91 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~   91 (272)
                      ....++.| ++..++.+.++...++ +++  .++++++++++.+|.||...+   +++|.++|+++++++++|.+++...
T Consensus       106 ~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~~g~  182 (371)
T PF00266_consen  106 EEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNP---IEEIAKLAHEYGALLVVDAAQSAGC  182 (371)
T ss_dssp             HHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTTTTT
T ss_pred             ccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEee---eceehhhhhccCCceeEechhcccc
Confidence            34445778 8989998766444433 222  289999999999999999988   8899999999999999999998522


Q ss_pred             cCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchH-----H--HHHhh-----h-hhccCCc
Q 036024           92 TDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI-----N--DFNRI-----I-CTCFNGA  158 (272)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~-----~--~~~~~-----~-~~~~~~~  158 (272)
                         .+..+..+.    .-++++|..|.+|.+|  +|+++.+++......+...     +  .+...     . .....++
T Consensus       183 ---~~id~~~~~----~D~~~~s~~Kl~gp~G--~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~  253 (371)
T PF00266_consen  183 ---VPIDLDELG----ADFLVFSSHKLGGPPG--LGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTP  253 (371)
T ss_dssp             ---SS--TTTTT----ESEEEEESTSTTSSST--EEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS-
T ss_pred             ---ccccccccc----cceeeecccccCCCCc--hhhheehhhhhhccccccccccccccccchhcccccccccccccce
Confidence               122333332    1289999999556566  7999999977321100000     0  00000     0 0112256


Q ss_pred             chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC----CCceEEEeecCCCChHHHHHHHHHhcC
Q 036024          159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGG----INAPYVWAHFPGRKSWDVFAEILEKTH  233 (272)
Q Consensus       159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~i~l~~~~~~~~~~~ll~~~g  233 (272)
                      +.....++...++.......++.+++..+..+++++.|+++ ++.+.++    ..+..+.+.+++.+..++...|.++ |
T Consensus       254 ~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~-~  332 (371)
T PF00266_consen  254 NVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGSDADDVVKYLEER-G  332 (371)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSSHHHHHHHHHHH-T
T ss_pred             eeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCCCHHHHHHHHhhc-C
Confidence            77767777777765545667888999999999999999998 5566442    2355677788877777777777777 9


Q ss_pred             eEeeCCCCCCC------CCCCeEEEEc--cCCHHHHHHH
Q 036024          234 ITTVPGSGFGP------GGEEYIRISG--FGHRESILEA  264 (272)
Q Consensus       234 i~v~~g~~~~~------~~~~~~R~s~--~~~~~~i~~~  264 (272)
                      |.+..|..+..      .-.+.+|+|+  +++++|++++
T Consensus       333 I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l  371 (371)
T PF00266_consen  333 IAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL  371 (371)
T ss_dssp             EEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred             EEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence            99999887750      1138999995  6799999875

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.75  E-value=2.4e-16  Score=136.46  Aligned_cols=170  Identities=19%  Similarity=0.272  Sum_probs=112.2

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+.     +...+...| +++.++.+....+.-.+  .+++|+|++++|+||||.+.+   +++|+++|+++
T Consensus       101 d~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i--~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~  175 (390)
T PRK08133        101 DHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAV--RPNTKLFFLETPSNPLTELAD---IAALAEIAHAA  175 (390)
T ss_pred             CEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHc
Confidence            55666544322     334556788 88888875332332222  268999999999999999987   89999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++|+|++|......   .++ ...  .  .+++.|+||.++.+|.++ ||++++++.        ++.+.........
T Consensus       176 gi~livD~t~~~~~~~---~pl-~~g--~--Divv~S~sK~~~g~g~~~GG~vv~~~~~--------~~~~~~~~~~~g~  239 (390)
T PRK08133        176 GALLVVDNCFCTPALQ---QPL-KLG--A--DVVIHSATKYLDGQGRVLGGAVVGSKEL--------MEEVFGFLRTAGP  239 (390)
T ss_pred             CCEEEEECCCcccccC---Cch-hhC--C--cEEEeecceeecCCcceEeEEEEcCHHH--------HHHHHHHHHHhCC
Confidence            9999999998643321   121 221  1  288999999998788887 556666655        3444433333333


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ..+...+.   .+++  +.+.+..+.++..+++..+.+.|++.
T Consensus       240 ~~~~~~a~---~~l~--gl~tl~~R~~~~~~~a~~la~~L~~~  277 (390)
T PRK08133        240 TLSPFNAW---VFLK--GLETLSLRMEAHSANALALAEWLEAH  277 (390)
T ss_pred             CCCHHHHH---HHHc--ccchHHHHHHHHHHHHHHHHHHHHhC
Confidence            34434322   2222  22355667778888999999999987

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.75  E-value=4.3e-17  Score=129.22  Aligned_cols=210  Identities=19%  Similarity=0.189  Sum_probs=150.6

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCC-CCCceEEEecCccccC-C
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG-AREVAIEISSFSKFSG-F  121 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g-~  121 (272)
                      .+.|+++....-...|..-|   +++|.+++++||+++++||+|..+.++.......+..+ +.+..+..++++|++| +
T Consensus       192 ~r~klv~TDg~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga  268 (417)
T KOG1359|consen  192 MRLKLVVTDGVFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGA  268 (417)
T ss_pred             heEEEEEecceeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCC
Confidence            35566766677888898877   89999999999999999999998888877666665543 4556699999999997 6


Q ss_pred             CccceeEEEecccccccCCcchHHHHHhhhhhccC--CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN--GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      .|   ||..+|.++        +..++....+..+  +.++.....+.+++.....  -.....+.+.+.+++++.++..
T Consensus       269 ~G---Gyttgp~~l--------i~llrqr~RpylFSnslppavV~~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~a  335 (417)
T KOG1359|consen  269 SG---GYTTGPKPL--------ISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMV--SSKEIQSRQANTQRFREFMEAA  335 (417)
T ss_pred             CC---CCccCChhH--------HHHHHhcCCceeecCCCChhhhhhhHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhc
Confidence            67   999999999        4444433332222  2222222223333331111  1445567888999999999999


Q ss_pred             CCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          200 GIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       200 g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      |+.+.+. ..+++.+.+. ......+..+||++ ||+|..-+..- |.++..+|+.++  .++||++++++++.++
T Consensus       336 GftIsg~-~hPI~pv~lGda~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~v  409 (417)
T KOG1359|consen  336 GFTISGA-SHPICPVMLGDARLASKMADELLKR-GIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEV  409 (417)
T ss_pred             CceecCC-CCCccceecccHHHHHHHHHHHHhc-CceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHH
Confidence            9999884 4667777776 34556778889988 99997544332 566778888874  4899999999998764

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.75  E-value=1.4e-16  Score=139.04  Aligned_cols=206  Identities=19%  Similarity=0.144  Sum_probs=136.1

Q ss_pred             CCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.++++...+.-+| ..+|++.+++|.++|++||+++|+||+|.++...+........    +....+.++||.++ +
T Consensus       197 ~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~----gv~pDi~tlsK~l~-~  271 (425)
T PRK07495        197 QRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHH----EVAADLTTMAKGLA-G  271 (425)
T ss_pred             CceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeeccc----CCCCCEEeehhhhc-C
Confidence            4566777763333378 4578999999999999999999999999976555532222222    22345678999998 8


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      |+++|+++++++..        +.+.......+++.+++++.++.+.++....   ....++.+++.+++++.|+++   
T Consensus       272 G~pigav~~~~~i~--------~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~  340 (425)
T PRK07495        272 GFPLAAVTGRAEIM--------DAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE---EDLCERANQLGNRLKQRLASLRET  340 (425)
T ss_pred             CccceEEEEcHHHH--------hccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999988873        3332223345556888888877777652221   234455555555565555543   


Q ss_pred             -C-C-eEecCCCceEEEeecCCCC--------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHH
Q 036024          200 -G-I-KVYGGINAPYVWAHFPGRK--------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASR  266 (272)
Q Consensus       200 -g-~-~~~~~~~~~~~~i~l~~~~--------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~  266 (272)
                       + + .+.+  .|.++|+++...+        ...+...+++ .|+.+.+..   .. .+.+||.  +..++++++++++
T Consensus       341 ~~~i~~vrG--~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~g---~~-~~~~r~~Ppl~it~~~id~~~~  413 (425)
T PRK07495        341 VPEIADIRG--PGFMNAVEFNDADSGLPSAEFANRVRLKALE-KGLILLTCG---VH-GNVIRFLAPITIQDDVFAEALD  413 (425)
T ss_pred             CCCeeeeec--CceEEEEEEecCCCCCccHHHHHHHHHHHHH-CCeEEeecC---CC-CCEEEEeCCCccCHHHHHHHHH
Confidence             2 1 2233  4889999985311        1234444444 599986532   11 3679998  5679999999999


Q ss_pred             HHHHhC
Q 036024          267 RLEALF  272 (272)
Q Consensus       267 ~l~~~l  272 (272)
                      +|+++|
T Consensus       414 ~l~~~l  419 (425)
T PRK07495        414 ILEASI  419 (425)
T ss_pred             HHHHHH
Confidence            998864

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.75  E-value=2.1e-16  Score=135.58  Aligned_cols=236  Identities=16%  Similarity=0.095  Sum_probs=142.3

Q ss_pred             cccccccCccc-c----hHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEE-EecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-L----EDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIF-FCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~----~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~-~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|... |    .......| ++++++.+  ....++ +++  .+++++++ +++|+||+|.+.+   +++|+++
T Consensus       100 ~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~--~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~---~~~i~~~  174 (363)
T TIGR01437       100 NEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA--NECSAEQLEAAITEKTAAILYIKSHHCVQKSMLS---VEDAAQV  174 (363)
T ss_pred             ceEEEECccchhcCCchHHHHHhcCCeEEEEcCC--CCCCHHHHHHhcChhceEEEEEecCCCCcCCcCC---HHHHHHH
Confidence            46666442222 3    34455567 88888763  233333 333  37888766 5688999999888   7889999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      |+++|+++++|++|..   .  ......+..    .+++.|++|.+  +|++.|+++.+++.        ++........
T Consensus       175 a~~~gi~vivD~a~~~---~--~~~~~~~g~----D~~~~S~~K~l--~gp~~G~l~~~~~~--------i~~~~~~~~~  235 (363)
T TIGR01437       175 AQEHNLPLIVDAAAEE---D--LQKYYRLGA----DLVIYSGAKAI--EGPTSGLVLGKKKY--------IEWVKLQSKG  235 (363)
T ss_pred             HHHcCCeEEEECCCCC---c--hHHHHHcCC----CEEEEeCCccc--CCCceEEEEEcHHH--------HHHHHhccCC
Confidence            9999999999999972   1  111122211    27789999976  46679999887766        3332211110


Q ss_pred             -----ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC--Cc-----eEEEeecC--C
Q 036024          154 -----CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI--NA-----PYVWAHFP--G  218 (272)
Q Consensus       154 -----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~--~~-----~~~~i~l~--~  218 (272)
                           .....+..++.++...+....    .+..+.+.++++.+.+.|+++ |+++..+.  .+     ..+.++..  +
T Consensus       236 ~~~~~~~~~~~~~gl~aAl~~~~~~~----~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g  311 (363)
T TIGR01437       236 IGRAMKVGKENILGLTAALEQYLSTG----KESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELG  311 (363)
T ss_pred             CcceeccCHHHHHHHHHHHHHHHccC----cccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCC
Confidence                 011122334444444443222    233444556677899999987 88876421  11     22334432  4


Q ss_pred             CChHHHHHHHHHhcC--eEeeCCCCCCCCCCCeEEEEc-cCCHHHHHHHHHHHHHhC
Q 036024          219 RKSWDVFAEILEKTH--ITTVPGSGFGPGGEEYIRISG-FGHRESILEASRRLEALF  272 (272)
Q Consensus       219 ~~~~~~~~~ll~~~g--i~v~~g~~~~~~~~~~~R~s~-~~~~~~i~~~l~~l~~~l  272 (272)
                      .+..++...| ++.|  |.+++  .|.+  .+.+|++. +.+++|++.+.++|++++
T Consensus       312 ~~~~~l~~~L-~~~~~~I~~r~--~~~~--~~~~~l~~~~~~~~e~~~~~~~l~~~~  363 (363)
T TIGR01437       312 MTAADVVQAL-RQGEPAIYTRG--YKAN--EGIIEIDPRSVTGGQLDIIVERIREIV  363 (363)
T ss_pred             CCHHHHHHHH-hcCCCCEEEee--eeec--CCeEEEEeecCCHHHHHHHHHHHHHhC
Confidence            4566766665 4446  66554  3333  57888886 457999999999998864

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.75  E-value=1.8e-16  Score=140.67  Aligned_cols=253  Identities=15%  Similarity=0.097  Sum_probs=158.7

Q ss_pred             ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      .|++..+..+ |...++..| +++.+|++.+  +.+|++.     .++++++++++|| |||..  ..++++|+++|+++
T Consensus       163 ~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~--~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~  237 (481)
T PRK04366        163 EVIVPDSAHGTNPASAAMAGFKVVEIPSNED--GLVDLEALKAAVGEDTAALMLTNPN-TLGLF--ERNILEIAEIVHEA  237 (481)
T ss_pred             EEEEcCCccHhHHHHHHHcCCEEEEeecCCC--CCcCHHHHHhhcccCCeEEEEeCCC-Ccccc--chHHHHHHHHHHHc
Confidence            5667665444 777788888 9999999644  4455332     2688999999998 99964  35799999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcchHH--------
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFPVIN--------  145 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~~~~--------  145 (272)
                      |+++++|.++.....+.  .+...+.    --++++|.+|.+|.|    |--+|++.+++++.+..-.++..        
T Consensus       238 gal~iVD~a~~~~~~g~--~~~~~~G----aD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l  311 (481)
T PRK04366        238 GGLLYYDGANLNAILGK--ARPGDMG----FDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRL  311 (481)
T ss_pred             CCEEEEEecChhhhccc--CCccccC----CCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceee
Confidence            99999999985321221  1222222    228899999998744    34478888877654322111000        


Q ss_pred             HH--H-hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCc-eEEEeec-----
Q 036024          146 DF--N-RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINA-PYVWAHF-----  216 (272)
Q Consensus       146 ~~--~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~i~l-----  216 (272)
                      .+  . ..+.....+.+.....++...+...+.+.+++..++..++++++++.|+++ +.+..+... .-+.+..     
T Consensus       312 ~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~  390 (481)
T PRK04366        312 DYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-YDLPYDRPCMHEFVLSGKKLKE  390 (481)
T ss_pred             cccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-CcccCCCCeeEEEEEECccccc
Confidence            00  0 000111112233444555555555566777888888999999999999986 333222111 1122332     


Q ss_pred             CCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          217 PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       217 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      ++.+..++..+|.++ ||.+. +..+.....+.+|+++  .+|++|++++++.|+++
T Consensus       391 ~g~~~~~v~~~L~~~-Gi~~~-~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i  445 (481)
T PRK04366        391 TGVRTLDIAKRLLDY-GFHPP-TIYFPLIVPEALMIEPTETESKETLDAFIAAMKQI  445 (481)
T ss_pred             cCCCHHHHHHHHHHC-CccCC-ccccccccCCeEEEcccCCCCHHHHHHHHHHHHHH
Confidence            234567777777665 99875 2222111256899996  56899999999998765

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.74  E-value=2.1e-16  Score=137.25  Aligned_cols=168  Identities=15%  Similarity=0.248  Sum_probs=110.6

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+.     +...+...| +++.++......    +++  .+++|+|++++|+||||.+.+   +++|.++|+
T Consensus       104 d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~----l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~  176 (400)
T PRK06234        104 DHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEE----VRNALKANTKVVYLETPANPTLKVTD---IKAISNIAH  176 (400)
T ss_pred             CEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHH----HHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHH
Confidence            56666665433     223346678 888887642111    222  267899999999999999987   888899998


Q ss_pred             Hc--CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhh--
Q 036024           76 NN--GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRI--  150 (272)
Q Consensus        76 ~~--~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~--  150 (272)
                      ++  ++++|+|++|......   .++ ..    +..+++.|+||.++.+|.++ ||+++++++        .+.+...  
T Consensus       177 ~~~~~i~livDea~~~~~~~---~~l-~~----g~Divv~S~sK~l~g~g~~~gG~v~~~~~~--------~~~l~~~~~  240 (400)
T PRK06234        177 ENNKECLVFVDNTFCTPYIQ---RPL-QL----GADVVVHSATKYLNGHGDVIAGFVVGKEEF--------INQVKLFGI  240 (400)
T ss_pred             hcCCCCEEEEECCCCchhcC---Cch-hh----CCcEEEeeccccccCCCCceeEEEEecHHH--------HHHHHHHHH
Confidence            87  9999999999865432   122 22    22389999999998788775 999988876        4444332  


Q ss_pred             hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          151 ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       151 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ........++.....+...+     +.+..+.++.++++..+.+.|+.+
T Consensus       241 ~~~~g~~l~p~~a~l~~~~l-----~tl~~r~~~~~~na~~~a~~L~~~  284 (400)
T PRK06234        241 KDMTGSVIGPFEAFLIIRGM-----KTLQIRMEKHCKNAMKVAKFLESH  284 (400)
T ss_pred             HHhcCCCCCHHHHHHHHhcc-----CcHHHHHHHHHHHHHHHHHHHHcC
Confidence            11222223433333222322     334556677778999999999876

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.74  E-value=1.4e-16  Score=139.88  Aligned_cols=207  Identities=15%  Similarity=0.100  Sum_probs=137.2

Q ss_pred             CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.++++-..+...|... +++.+++|.++|++||+++|+||+|.++...+...........+|    +.|+||.+| +|
T Consensus       207 ~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pD----i~t~sK~lg-~G  281 (433)
T PRK08117        207 EVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPD----IMTIAKGIA-SG  281 (433)
T ss_pred             cEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCC----Eeehhhhcc-CC
Confidence            444555544466667764 678899999999999999999999998655543222222222222    468999999 99


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----  199 (272)
                      +++|+++++++.        .+.+.......+.+.+++++.++.+.++....   +...++++++.+++++.|.++    
T Consensus       282 ~pigav~~~~~i--------~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~  350 (433)
T PRK08117        282 LPLSAVVASKEL--------MEQWPLGSHGTTFGGNPVACAAALATLEVIKE---EKLLDNANEMGAYALERLEVLKEKH  350 (433)
T ss_pred             CcceeEEEcHHH--------HhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999887        44443333444556788888888888873222   345566677777777777664    


Q ss_pred             CCeEecCCCceEEEeecCCC------C-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHH
Q 036024          200 GIKVYGGINAPYVWAHFPGR------K-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEA  270 (272)
Q Consensus       200 g~~~~~~~~~~~~~i~l~~~------~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~  270 (272)
                      ++.......|.++++.+...      . ...+...+ .++||.+.+..   . ..+.+|++  +..+++++++++++|++
T Consensus       351 ~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g---~-~~~~lRl~p~~~~t~~~i~~~~~~l~~  425 (433)
T PRK08117        351 PVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKC-LEKGLLFYLCG---N-AGNVLRMIPPLTVTKEEIDEGLDILDE  425 (433)
T ss_pred             CceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHH-HHCCCEEeecC---C-CCCEEEEeCCccCCHHHHHHHHHHHHH
Confidence            22222223466777777321      1 22334444 45599886532   1 24689999  46799999999999987


Q ss_pred             hC
Q 036024          271 LF  272 (272)
Q Consensus       271 ~l  272 (272)
                      ++
T Consensus       426 ~l  427 (433)
T PRK08117        426 AL  427 (433)
T ss_pred             HH
Confidence            64

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.74  E-value=1.7e-16  Score=137.29  Aligned_cols=173  Identities=18%  Similarity=0.213  Sum_probs=112.4

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      +++++|++++|+||||.+++   +++|.++|+++++++|+|++|......   .++ ...  .+  +++.|+||.++.+|
T Consensus       145 ~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~---~pl-~~g--~D--iv~~S~sK~l~g~g  213 (386)
T PRK06767        145 PNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ---RPL-ELG--CD--AVVHSATKYIGGHG  213 (386)
T ss_pred             cCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC---Cch-hcC--Cc--EEEecCcceecCCC
Confidence            67899999999999999987   788899999999999999999642222   122 111  12  78889999998788


Q ss_pred             cce-eEEEecccccccCCcchHHHHH-hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 036024          124 VRL-GWTVVPEELLFSSGFPVINDFN-RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-G  200 (272)
Q Consensus       124 ~r~-G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g  200 (272)
                      .++ ||++++++.        +.... ..........++..+.++...+     +.+..+.++.++++..+.+.|+++ +
T Consensus       214 ~~~gG~v~~~~~~--------i~~~~~~~~~~~g~~~~~~~a~l~~~~L-----~tl~~r~~~~~~~a~~la~~L~~~p~  280 (386)
T PRK06767        214 DVVAGVTICKTRA--------LAEKIRPMRKDIGGIMAPFDAWLLLRGL-----KTLAVRMDRHCDNAEKIVSFLKNHDA  280 (386)
T ss_pred             CceeEEEEeChHH--------HHHHHHHHHHHhCCCCCHHHHHHHHcCC-----CcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            885 899888876        33322 2222222223433333322222     233567788899999999999987 6


Q ss_pred             CeE-ecC----------CCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCC
Q 036024          201 IKV-YGG----------INAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGS  240 (272)
Q Consensus       201 ~~~-~~~----------~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~  240 (272)
                      +.. ..|          ..|..+.+.+++. ...+.+..-++..++.+.-|.
T Consensus       281 v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~  332 (386)
T PRK06767        281 VEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGD  332 (386)
T ss_pred             ccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCC
Confidence            653 322          2345677778632 223334444456576665553

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.74  E-value=3.9e-16  Score=136.07  Aligned_cols=206  Identities=15%  Similarity=0.067  Sum_probs=131.3

Q ss_pred             CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC-
Q 036024           45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT-  122 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~-  122 (272)
                      ++.++++-..+++.|. ..+++.+++|.++|++||+++|+||++.++...+.........-.+|    +.++||.+| + 
T Consensus       194 ~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD----i~~~~K~lg-~~  268 (412)
T TIGR02407       194 LPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD----IVCLSKSIS-GY  268 (412)
T ss_pred             ceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC----EEEechhcc-CC
Confidence            4566665555888998 57888999999999999999999999986644332222222222344    235899998 7 


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHh---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS-EGLEAVHSVVDYYKENTKILIDTLAS---  198 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~---  198 (272)
                      |+++|+++++++. .. .       .......+++.++++..++.+.++. ...   .+..++.++..+++++.|+.   
T Consensus       269 G~pigav~~~~~~-~~-~-------~~~~~~~T~~gnpl~~aaa~a~l~~~i~~---~~l~~~~~~~g~~l~~~l~~l~~  336 (412)
T TIGR02407       269 GLPLALTLIKPEL-DV-W-------KPGEHNGTFRGNNLAFVTATAALEYYWSD---DAFEKAVQRKSEIIQERLDRIVA  336 (412)
T ss_pred             ccceeEEEEchhh-hc-c-------CCCccCCCCCccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999998765 21 1       1122334445667765555555542 111   22334444444444444443   


Q ss_pred             -CC-CeEecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          199 -LG-IKVYGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       199 -~g-~~~~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                       .+ +.......|.++|+.++... ...+...+++ +||.+.+...+    .+.+|++.  ..+++|+++++++|+++|
T Consensus       337 ~~~~~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~-~Gv~v~~~~~~----~~~lr~~p~l~~t~~~i~~~~~~l~~~l  410 (412)
T TIGR02407       337 EYPELIKQVRGRGLMQGIECGDGDLAGKIAKAAFE-NGLIIETSGPN----DEVIKLLPPLTIDEETLQQGLDILEQAV  410 (412)
T ss_pred             hCCCceEeeecceeEEEEEecChHHHHHHHHHHHH-CCCEEeccCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence             22 22333346899999997533 3345555555 59999764321    45799884  569999999999999875

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.74  E-value=1.1e-15  Score=132.67  Aligned_cols=171  Identities=16%  Similarity=0.164  Sum_probs=113.9

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+.     +...+...| +++.++......+.-.+  .+++|++++++|+||||.+.+   +++|+++|+++
T Consensus       100 D~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i--~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~  174 (405)
T PRK08776        100 DTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADAL--AQSPKLVLIETPSNPLLRITD---LRFVIEAAHKV  174 (405)
T ss_pred             CEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCccCC---HHHHHHHHHHc
Confidence            56666655443     333445567 77777653211111112  267899999999999999865   89999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC-ccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT-GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~-g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++|+|++|....   ...++ .+.  .|  +++.|.+|.++.+ +...|+++.+++.+       .+++.........
T Consensus       175 gi~vIvD~a~a~~~---~~~pl-~~g--aD--ivv~S~tK~l~g~~~~~~G~vv~~~~~l-------~~~l~~~~~~~g~  239 (405)
T PRK08776        175 GALTVVDNTFLSPA---LQKPL-EFG--AD--LVLHSTTKYINGHSDVVGGAVVARDAEL-------HQQLVWWANALGL  239 (405)
T ss_pred             CCEEEEECCCcccc---cCCcc-ccc--CC--EEEecCceeecCCCCceEEEEEeCCHHH-------HHHHHHHHHhcCC
Confidence            99999999997521   11222 221  12  8899999999744 57789988765442       4455444443333


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ..+++...++.     .+.++++.+.++.++++..+.+.|+++
T Consensus       240 ~~s~~~a~l~~-----~gl~tl~~r~~~~~~na~~la~~L~~~  277 (405)
T PRK08776        240 TGSPFDAFLTL-----RGLRTLDARLRVHQENADAIAALLDGH  277 (405)
T ss_pred             CCCHHHHHHHH-----hhhCcHHHHHHHHHHHHHHHHHHHHcC
Confidence            35555544433     333566888899999999999999986

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=99.73  E-value=3.5e-16  Score=124.92  Aligned_cols=226  Identities=16%  Similarity=0.189  Sum_probs=165.4

Q ss_pred             cccccCccc-chHHhcccc--eeEEeecCCCCCcccCCCC-------CCCceEEEEe-cCCCccccCCCHHHHHHHHHHH
Q 036024            6 SVIVGQAGD-LEDEVGKYC--NIEYLECGPGNNFFPDLKG-------TSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g--~~~~~~~~~~~~~~~dl~~-------~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.+..|+|+ -...+...|  .+..++.-....-.+|++.       .|.-.++++. ..|||||+..+.|+..+|++..
T Consensus       128 VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vi  207 (410)
T KOG1412|consen  128 VYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVI  207 (410)
T ss_pred             eEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHH
Confidence            566778887 345566677  5666666555455666443       3444455555 5599999999999999999999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCcc---ccCCCCCceEEEecCccccCCCccceeEEEe--cccccccCCcchHHHHHh
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIY---EIPGAREVAIEISSFSKFSGFTGVRLGWTVV--PEELLFSSGFPVINDFNR  149 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~~~~~~~~~~~~~~~~~~  149 (272)
                      ++.+.+.+.|-+|+++..++......   ........+++..||+|.+|+-+-|+|-+..  .+...   ...+..++..
T Consensus       208 k~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~---i~~v~SQl~l  284 (410)
T KOG1412|consen  208 KSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAV---IAGVKSQLTL  284 (410)
T ss_pred             HhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhH---HHHHHHHHHH
Confidence            99999999999999988775322211   1111223469999999999999999998544  33332   2334567777


Q ss_pred             hhhhccCCcchHHHHHHHHhcccccH-----HHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCCC
Q 036024          150 IICTCFNGASNIAQAGGLACLSSEGL-----EAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGRK  220 (272)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~~  220 (272)
                      ......+.++..+..++..+|..+..     ..++.+-.++++++..|++.|..++    |.....+-|+|-+-.+.   
T Consensus       285 viR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLt---  361 (410)
T KOG1412|consen  285 VIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLT---  361 (410)
T ss_pred             HHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCC---
Confidence            77777878888999999999986554     4577788899999999999999983    55556677888776663   


Q ss_pred             hHHHHHHHHHhcCeEeeC
Q 036024          221 SWDVFAEILEKTHITTVP  238 (272)
Q Consensus       221 ~~~~~~~ll~~~gi~v~~  238 (272)
                      + ..+..|.+++.|++.+
T Consensus       362 p-~qV~~li~~h~vyLl~  378 (410)
T KOG1412|consen  362 P-AQVDHLIENHKVYLLS  378 (410)
T ss_pred             H-HHHHHHHHhceEEEec
Confidence            2 5688899999999965

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.73  E-value=2.3e-16  Score=129.88  Aligned_cols=213  Identities=18%  Similarity=0.172  Sum_probs=158.5

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCC-CCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG-AREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~  122 (272)
                      .-+|+|.+-+.+..+|.+-|   +++|++++++||++.++||+|....|++.+..+.+-++ +...-|+.|++.|+||+-
T Consensus       302 svPKivAFEtVhSM~Gavcp---leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcV  378 (570)
T KOG1360|consen  302 SVPKIVAFETVHSMDGAVCP---LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCV  378 (570)
T ss_pred             CCCceEEEeeeeccCCCcCC---HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhcccc
Confidence            45789999999999999988   99999999999999999999998888866555554433 333448999999999998


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCC--cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG--ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g  200 (272)
                      |   ||+.+...+        ++-++.+...+.++  .++.....+.+..+....++....|++.+++..++++.|.+.|
T Consensus       379 G---GYIAat~~L--------vDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~G  447 (570)
T KOG1360|consen  379 G---GYIAATRKL--------VDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELG  447 (570)
T ss_pred             c---ceehhhhhH--------HHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcC
Confidence            8   999998888        66666666433332  2333333333333322223447788999999999999999999


Q ss_pred             CeEecCCCceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          201 IKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       201 ~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      +.+.+. .+.++-+.+. .....+....|+.++||++..-.+.. +.|...+|++-  ..|++.++-++..+..+
T Consensus       448 iPVi~~-pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~v  521 (570)
T KOG1360|consen  448 IPVIPN-PSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDV  521 (570)
T ss_pred             CcccCC-CcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHH
Confidence            999874 4566767776 34567888999999999998655443 56778899985  34777777777766543

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.73  E-value=1.9e-15  Score=131.06  Aligned_cols=168  Identities=19%  Similarity=0.200  Sum_probs=108.3

Q ss_pred             cccccccCccc-c----hHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-L----EDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~----~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.+. +    ...+...| +++.++.     ..++ +++  .+++|+|++++|+||||.+++   +++|.++|
T Consensus       105 d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-----~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la  176 (398)
T PRK07504        105 DHVVAARALFGSCRYVVETLLPRYGIESTLVDG-----LDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIA  176 (398)
T ss_pred             CEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC-----CCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHH
Confidence            55666655433 2    23334567 7777752     1112 222  268999999999999999988   88999999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcccee-EEEecccccccCCcchHHHHHhhhhh
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLG-WTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G-~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +++|+++|+|++|......   .+ ..+.    ..+++.|++|.++.+|.++| +++++++.+       ...+......
T Consensus       177 ~~~gi~lvvD~a~a~~~~~---~~-~~~g----aDivv~S~sK~l~g~g~~~GG~vv~~~~~i-------~~~~~~~~~~  241 (398)
T PRK07504        177 NQAGAKLVVDNVFATPLFQ---KP-LELG----AHIVVYSATKHIDGQGRCLGGVVLSDKAWI-------EEHLQDYFRH  241 (398)
T ss_pred             HHcCCEEEEECCccccccC---Cc-hhhC----CCEEEeeccccccCCccceEEEEEeCcHHH-------HHHHHHHHHH
Confidence            9999999999999854322   11 1221    23889999999987899986 555555552       1223322222


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      .....+......+.+.+     +.+..+.++..+++..+.+.|+++
T Consensus       242 ~g~~~s~~~A~~~l~~L-----~tl~~R~~~~~~na~~la~~L~~~  282 (398)
T PRK07504        242 TGPSLSPFNAWTLLKGL-----ETLPVRVRQQTESAAAIADFLAGH  282 (398)
T ss_pred             hCCCCCHHHHHHHHhcc-----chHHHHHHHHHHHHHHHHHHHHcC
Confidence            23334444433333333     334667777789999999999886

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.72  E-value=3.5e-16  Score=130.80  Aligned_cols=224  Identities=17%  Similarity=0.175  Sum_probs=163.5

Q ss_pred             eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHH-HHHHHHHHHHcCCEEEEcccCCccccCCCCCCcccc
Q 036024           24 NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQ-LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI  102 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~  102 (272)
                      .+..+|.++-.....-++  +++.+|++-.-+...|+..++++ ++++.++|++||+++|.||++.++...|........
T Consensus       165 g~~~vpfnDi~al~~ai~--~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~  242 (404)
T COG4992         165 GFRHVPFNDIEALEAAID--EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHY  242 (404)
T ss_pred             CceecCCCCHHHHHHHhc--cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHh
Confidence            445555543322222222  47888888777999998876555 899999999999999999999988777654444444


Q ss_pred             CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHH
Q 036024          103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVV  182 (272)
Q Consensus       103 ~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  182 (272)
                      ...+|.+    ++.|.+| .|..+|.+++.+..        .+-+..-...++++.|+++..++.+.++....   +...
T Consensus       243 gV~PDI~----tlaK~Lg-GG~PigA~la~~~~--------~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~---e~ll  306 (404)
T COG4992         243 GVEPDIL----TLAKALG-GGFPIGAMLATEEI--------ASAFTPGDHGSTFGGNPLACAVALAVLEVLLE---EGLL  306 (404)
T ss_pred             CCCCCEE----Eeecccc-CCccceeeEEchhh--------hhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc---hhHH
Confidence            4455533    5899999 88999999998554        33455556778888999999999999885443   5667


Q ss_pred             HHHHHHHHHHHHHHHhC--CCeEec--CCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--cc
Q 036024          183 DYYKENTKILIDTLASL--GIKVYG--GINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GF  255 (272)
Q Consensus       183 ~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~  255 (272)
                      ++.+++.++|++.|.++  .+.+..  -..|.++-+.+... ...++...+.++ |+.+.+..      ++.+||.  +.
T Consensus       307 ~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~~-gvL~~~a~------~~ViR~~PpL~  379 (404)
T COG4992         307 ENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPYRARDIVRALREE-GVLVLPAG------PNVIRFLPPLV  379 (404)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcccHHHHHHHHHHC-CeEEecCC------CCeEEecCCcc
Confidence            77888888888888886  222221  12477777888643 356777776666 99998654      5699999  56


Q ss_pred             CCHHHHHHHHHHHHHhC
Q 036024          256 GHRESILEASRRLEALF  272 (272)
Q Consensus       256 ~~~~~i~~~l~~l~~~l  272 (272)
                      .+++++++++++|++++
T Consensus       380 i~~eei~~~~~~l~~~l  396 (404)
T COG4992         380 ITEEEIDEALDALERAL  396 (404)
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence            69999999999998764

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.72  E-value=1.4e-15  Score=131.86  Aligned_cols=170  Identities=16%  Similarity=0.238  Sum_probs=110.8

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+.     +...+...| +++.++......+.--+  .+++|+|++++|+||||.+++   +++|+++|+++
T Consensus       104 D~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i--~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~  178 (398)
T PRK08249        104 DRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEI--AKGCDLLYLETPTNPTLKIVD---IERLAAAAKKV  178 (398)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhc--CCCCeEEEEECCCCCCCccCC---HHHHHHHHHHc
Confidence            55666555443     223355677 77766542111111112  257899999999999999988   88899999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++|+|++|.......   ++ ...  .+  ++++|+||.+|.+|.++ |++++++++        .+.+...+.....
T Consensus       179 gi~livD~t~a~~~~~~---~l-~~~--~D--ivv~S~sK~l~g~~~~~gG~vv~~~~l--------~~~l~~~~~~~g~  242 (398)
T PRK08249        179 GALVVVDNTFATPINQN---PL-ALG--AD--LVIHSATKFLSGHADALGGVVCGSKEL--------MEQVYHYREINGA  242 (398)
T ss_pred             CCEEEEECCcCccccCC---ch-hhC--CC--EEeccCceecCCCCCceEEEEECCHHH--------HHHHHHHHHhcCC
Confidence            99999999998543221   22 121  22  78899999998667665 666666555        5555555544444


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ..+...+..+.+-+     +.+..+.++.++++..+.+.|+++
T Consensus       243 ~~s~~~a~l~l~~l-----~tL~~R~~~~~~na~~la~~L~~~  280 (398)
T PRK08249        243 TMDPMSAYLILRGM-----KTLKLRVRQQQESAMALAKYLQTH  280 (398)
T ss_pred             CCCHHHHHHHHhCc-----chHHHHHHHHHHHHHHHHHHHHcC
Confidence            45555444433333     334556677889999999999986

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.71  E-value=7.3e-16  Score=134.95  Aligned_cols=208  Identities=15%  Similarity=0.092  Sum_probs=133.8

Q ss_pred             CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.++++-..+...|. .++++.+++|.++|++||+++|+||++.++...+.........-.+|    +.++||.+|..|
T Consensus       198 ~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PD----i~t~~K~l~~~G  273 (425)
T PRK09264        198 LPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPD----IVTLSKSISGYG  273 (425)
T ss_pred             ceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCC----EEEeccccCCCc
Confidence            3556655555666776 56888999999999999999999999987644443222222222344    236799998449


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----  199 (272)
                      +++|+++++++. .        .+.......+++.++++..++.+.+.....+  .+..++++++.+++++.|+++    
T Consensus       274 ~pigav~~~~~i-~--------~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~  342 (425)
T PRK09264        274 LPMALVLIKPEL-D--------VWKPGEHNGTFRGNNLAFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEEIAAKY  342 (425)
T ss_pred             cceEEEEEchhh-h--------ccCCCccCCCCCCCHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999999998775 1        1111122334456667766666666322111  345666677777777766553    


Q ss_pred             C-CeEecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          200 G-IKVYGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       200 g-~~~~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      + +.......|.+.++.++... ...+...++++ ||.+.+...+    ...+|++.  ..+++++++++++|++++
T Consensus       343 ~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~-Gv~~~~~~~~----~~~lr~~p~l~~t~~ei~~~~~~l~~~l  414 (425)
T PRK09264        343 PGLGAEVRGRGMMQGIDFGDGELAGKIAAEAFEN-GLIIETSGPE----DEVVKLLPPLTIDEEELEEGLDILEEAV  414 (425)
T ss_pred             CCceecceecccEEEEEecChHHHHHHHHHHHHC-CCEEeccCCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence            2 21112235788899987432 34555555555 9999775322    36788884  468999999999998764

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.71  E-value=1.1e-15  Score=132.03  Aligned_cols=170  Identities=17%  Similarity=0.257  Sum_probs=111.2

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+.     +...+...| +++.++.+....+.-.+  .+++++|++.+|+||+|.+.+   +++|.++|+++
T Consensus        94 d~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i--~~~tklV~le~p~np~g~~~d---l~~I~~la~~~  168 (380)
T TIGR01325        94 DHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAV--KPNTKLVFVETPSNPLGELVD---IAALAELAHAI  168 (380)
T ss_pred             CEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhc--CCCceEEEEECCCCCCCeeeC---HHHHHHHHHHc
Confidence            55666544332     334566788 88888775211111111  257899999999999999976   89999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++|+|++|.......   ++ ...    ..+++.|++|.++.+|.++ |+++++++.        .+.+.........
T Consensus       169 gi~livD~a~~~~~~~~---pl-~~g----~Divv~S~sK~l~g~g~~~gG~vv~~~~~--------~~~l~~~~~~~g~  232 (380)
T TIGR01325       169 GALLVVDNVFATPVLQQ---PL-KLG----ADVVVYSATKHIDGQGRVMGGVIAGSEEL--------MAEVAVYLRHTGP  232 (380)
T ss_pred             CCEEEEECCCcccccCC---ch-hhC----CCEEEeeccceecCCCCeEEEEEEeCHHH--------HHHHHHHHHhhCC
Confidence            99999999997533221   22 221    1288889999998677776 677777665        4455544433333


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ..++....   .+++  +.+.+..+.++..+++..+.+.|+++
T Consensus       233 ~~~p~~a~---~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~  270 (380)
T TIGR01325       233 AMSPFNAW---VLLK--GLETLSLRMQKQFDSALAIAEWLQAQ  270 (380)
T ss_pred             CCCHHHHH---HHHh--ccCcHHHHHHHHHHHHHHHHHHHHcC
Confidence            23333322   2222  23444667788888999999999987

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.71  E-value=7.9e-16  Score=135.36  Aligned_cols=206  Identities=17%  Similarity=0.154  Sum_probs=136.6

Q ss_pred             CCceEEEEecCCCcc-ccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCSPNNPT-GHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~p~npt-G~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++.+++ ..|-+.. |.. .+++.+++|.++|++||+++|.||++.++...+...........+|.+    +++|.+| 
T Consensus       218 ~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv----~~gK~l~-  291 (443)
T PRK06058        218 DNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLI----TTAKGIA-  291 (443)
T ss_pred             CceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEE----EEccccc-
Confidence            3455555 4564444 444 357889999999999999999999999875544322222223334432    4589998 


Q ss_pred             CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--  199 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--  199 (272)
                      .|+++|+++++++.        .+.+.......+++.+++++.|+.+.++....   +...++.+++.+++++.|+++  
T Consensus       292 ~G~Pi~av~~~~~i--------~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~  360 (443)
T PRK06058        292 GGLPLSAVTGRAEI--------MDAPHPGGLGGTYGGNPVACAAALAAIETIEE---DDLVARARQIEALMTDRLRALAA  360 (443)
T ss_pred             CCCccEEEEEcHHH--------HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHh
Confidence            89999999998887        33333333445667899999999999873222   345667777777888887764  


Q ss_pred             --CCe-EecCCCceEEEeecCCC----Ch----HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHH
Q 036024          200 --GIK-VYGGINAPYVWAHFPGR----KS----WDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASR  266 (272)
Q Consensus       200 --g~~-~~~~~~~~~~~i~l~~~----~~----~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~  266 (272)
                        ++. -..+ .|.++.+.+...    .+    ..+...+++ +||.+.++..++    +.+|+.  +..++++++++++
T Consensus       361 ~~~~i~~vrg-~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~Gv~~~~~~~~~----~~lr~~Ppl~~t~~~i~~~~~  434 (443)
T PRK06058        361 EDDRIGDVRG-RGAMIAIELVKPGTTEPDAELTKALAAAAHA-AGVIVLTCGTYG----NVIRLLPPLVIGDELLREGLD  434 (443)
T ss_pred             hCCcEEeeec-cceEEEEEEecCCCCCCcHHHHHHHHHHHHH-CCeEEeccCCCC----CEEEEECCCccCHHHHHHHHH
Confidence              321 1232 355555555311    11    223444444 599998865442    589997  5679999999999


Q ss_pred             HHHHhC
Q 036024          267 RLEALF  272 (272)
Q Consensus       267 ~l~~~l  272 (272)
                      +|++++
T Consensus       435 ~l~~~l  440 (443)
T PRK06058        435 VLEAAL  440 (443)
T ss_pred             HHHHHH
Confidence            998864

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.71  E-value=9.4e-16  Score=130.66  Aligned_cols=242  Identities=13%  Similarity=0.114  Sum_probs=162.5

Q ss_pred             cccccCccc-chHHhcccceeEEeecCCCC----CcccC-CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            6 SVIVGQAGD-LEDEVGKYCNIEYLECGPGN----NFFPD-LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~----~~~~d-l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      ++..+.|+. +...++.+|-+..+..++..    ...++ ++..+++++|.+++..|.||+..+        ++++.+++
T Consensus        85 ~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~--------~l~~~~~~  156 (349)
T TIGR01364        85 YIVTGAWSKKAAKEAKKYGVVNVVASGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEFR--------ELPDVKNA  156 (349)
T ss_pred             EEECCHHHHHHHHHHHHhCCcEEEeccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEecc--------eecccCCC
Confidence            344566666 77777888854445543222    22222 333468999999999999999764        55666899


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcch--HHHHHhhh--hhcc
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPV--INDFNRII--CTCF  155 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~  155 (272)
                      ++++|.+.+.   ++.+..+..+    +  +++.|..|.+|.||  +|.++.+++.+....+..  ...+....  ....
T Consensus       157 l~iVDavss~---g~~~id~~~~----d--~~~~ssqK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (349)
T TIGR01364       157 PLVADMSSNI---LSRPIDVSKF----G--LIYAGAQKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMY  225 (349)
T ss_pred             eEEEEccccc---cCccCCHHHc----c--EEEEecccccCCCc--eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCC
Confidence            9999999875   3333444443    2  88889999999888  799999888754321211  01111111  2233


Q ss_pred             CCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhC-CCeEecC----CCceEEEeecCCC-ChHHHHHHH
Q 036024          156 NGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASL-GIKVYGG----INAPYVWAHFPGR-KSWDVFAEI  228 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~i~l~~~-~~~~~~~~l  228 (272)
                      .+++.....++.++++..... .++++.++.+++++++++.|+++ |+.....    .....+.+.+++. ...++... 
T Consensus       226 ~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~-  304 (349)
T TIGR01364       226 NTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKE-  304 (349)
T ss_pred             CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHH-
Confidence            467888888888888744444 57999999999999999999999 6644421    1224566777643 22344344 


Q ss_pred             HHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          229 LEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      +.+.|+++.+|..    ..+.+|+|+  +++++|+++++++|+++
T Consensus       305 ~~~~Gi~~~~~~~----~~g~vRvS~~~~nt~edid~l~~al~~~  345 (349)
T TIGR01364       305 AEERGLVSLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEF  345 (349)
T ss_pred             HHHCCCcccCCcc----ccCeeEEECcCCCCHHHHHHHHHHHHHH
Confidence            4556998877764    136899996  56899999999999875

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.70  E-value=9.8e-16  Score=132.33  Aligned_cols=245  Identities=14%  Similarity=0.076  Sum_probs=157.7

Q ss_pred             cccccCccc-chHHh-cccc--eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024            6 SVIVGQAGD-LEDEV-GKYC--NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII   81 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~-~~~g--~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v   81 (272)
                      ++..+.|+. +.... +++|  +++.++.++  +..+|+++...++.+.+++.+|.||...+   +++|++  +++|+++
T Consensus        95 vi~~g~f~~~~~~~~~~~~g~~~v~~~~~~~--g~~~d~~~i~~~~~V~~~h~~t~tG~~~p---i~~I~~--~~~g~~~  167 (378)
T PRK03080         95 HLAWESFGSKWATDVVKQLKLEDPRVLEADY--GSLPDLSAVDFDRDVVFTWNGTTTGVRVP---VARWIG--ADREGLT  167 (378)
T ss_pred             EEEeCHHHHHHHHHHHhhcCCCCceEeccCC--CCCCCHhhcCCCCCEEEEecCCccceecc---chhhcc--ccCCCeE
Confidence            334344444 33322 3444  667777653  33455555555778999999999999988   777777  7789999


Q ss_pred             EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecccccccCCcchH-----------H---H
Q 036024           82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPEELLFSSGFPVI-----------N---D  146 (272)
Q Consensus        82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~~~~~-----------~---~  146 (272)
                      ++|.+++.   +..+..+..+      -+++.|.+|.++. +|  +|+++.+++.+....+...           .   .
T Consensus       168 vVDa~qs~---G~~pidv~~i------D~~~~s~~K~l~~P~G--~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  236 (378)
T PRK03080        168 ICDATSAA---FALPLDWSKL------DVYTFSWQKVLGGEGG--HGMAILSPRAVERLESYTPARPIPKFFRLTKGGKA  236 (378)
T ss_pred             EEeccccc---ccCCCCHHHC------cEEEEehhhhCCCCCc--eEEEEECHHHHHhhhcccCCCCCchhheeccchHH
Confidence            99999875   2223333332      2889999999863 66  7999999877533111100           0   0


Q ss_pred             HH-hhhhhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCC-CeEecC----CCceEEEeecCC-
Q 036024          147 FN-RIICTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLG-IKVYGG----INAPYVWAHFPG-  218 (272)
Q Consensus       147 ~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~----~~~~~~~i~l~~-  218 (272)
                      .. .+...+..+++..+..++.+.++..... ..+++.++.+++.+++++.|++++ +.+..+    .++..+.+.+++ 
T Consensus       237 ~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~  316 (378)
T PRK03080        237 IENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDA  316 (378)
T ss_pred             hhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCc
Confidence            11 1112233445666665545555533232 468889999999999999999885 555431    123466677765 


Q ss_pred             --CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          219 --RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       219 --~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                        ..+.+...+++++ ||.+..|....  ..+.+|+|+  +++++|++.+++.|+++
T Consensus       317 ~~~~~~~~~~~l~~~-~i~v~~g~~~~--~~~~vRis~~~~~t~~di~~l~~al~~~  370 (378)
T PRK03080        317 QAAVDAAAVAKLLRE-NGAVDIEPYRD--APNGLRIWCGPTVEPADVEALTPWLDWA  370 (378)
T ss_pred             hHHHHHHHHHHHHHc-CCeeccccccC--CCCcEEEecCCCCCHHHHHHHHHHHHHH
Confidence              2344566677766 88887765322  347899995  67999999999999875

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.70  E-value=2.3e-15  Score=130.65  Aligned_cols=160  Identities=14%  Similarity=0.180  Sum_probs=108.0

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD   93 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~   93 (272)
                      +...++..| +++.++......+.--+  .+++++|++.+|+||||.+.+   +++|+++|+++++++|+|++|......
T Consensus       126 ~~~~~~~~G~~v~~vd~~d~~~l~~ai--~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~  200 (403)
T PRK07810        126 CNEILPRWGVETVFVDGEDLSQWEEAL--SVPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQ  200 (403)
T ss_pred             HHHHHHHcCcEEEEECCCCHHHHHHhc--CcCceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccC
Confidence            445667778 88888753111111111  268999999999999999976   999999999999999999999753332


Q ss_pred             CCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccc
Q 036024           94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS  172 (272)
Q Consensus        94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  172 (272)
                      .   ++ ...    ..+++.|++|.++..|.++ |+++++++.+       ...+...........+...+..+.+.++ 
T Consensus       201 ~---~~-~~g----aDivv~S~tK~l~g~g~~~gG~v~~~~~~~-------~~~l~~~~~~~g~~~s~~~a~l~l~~L~-  264 (403)
T PRK07810        201 R---GL-PLG----ADVVVYSGTKHIDGQGRVLGGAILGDREYI-------DGPVQKLMRHTGPALSAFNAWVLLKGLE-  264 (403)
T ss_pred             C---hh-hcC----CcEEEccCCceecCCcCceeEEEEeChHHH-------HHHHHHHHHHhCCCCCHHHHHHHHhccC-
Confidence            1   11 221    1288999999998678786 7777777652       2233333333333355555554444443 


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          173 EGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                          .+..+.++..+++..+.+.|+++
T Consensus       265 ----tl~~R~~~~~~~a~~~a~~L~~~  287 (403)
T PRK07810        265 ----TLALRVRHSNASALRIAEFLEGH  287 (403)
T ss_pred             ----cHHHHHHHHHHHHHHHHHHHhcC
Confidence                44667788888888888999886

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.69  E-value=1.3e-15  Score=133.54  Aligned_cols=205  Identities=17%  Similarity=0.167  Sum_probs=131.1

Q ss_pred             CCceEEEEecCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.+|++......+|.+.+ ++.+++|.++|++|++++|+||+|.++..++ ......+...+|    +.++||.+| .
T Consensus       196 ~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~-~~~~~~~~~~pD----i~~~gK~l~-~  269 (426)
T PRK00062        196 DEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL-GGAQGYYGVTPD----LTTLGKIIG-G  269 (426)
T ss_pred             CcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC-ccHHHHhCCCcc----hHhhhhHhh-C
Confidence            35666666644555888876 7789999999999999999999998773332 211222222233    358999998 8


Q ss_pred             ccceeEEEecccccccCCcchHHHHH---hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH--
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFN---RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA--  197 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~--  197 (272)
                      |+++|+++++++.        .+.+.   .....++.+.+++.+.++.+.++....   ++..++.+++.+++++.|+  
T Consensus       270 G~p~ga~~~~~~i--------~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~---~~~~~~~~~~~~~~~~~l~~~  338 (426)
T PRK00062        270 GLPVGAFGGRREI--------MEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE---PGFYEELEALTKRLAEGLKEA  338 (426)
T ss_pred             CCcceeeeEHHHH--------HHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHH
Confidence            9999999888877        44442   122333445788888888888873222   1244445555555555554  


Q ss_pred             --hCCCeEecCCCceEEEeecCCC-----------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHH
Q 036024          198 --SLGIKVYGGINAPYVWAHFPGR-----------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESI  261 (272)
Q Consensus       198 --~~g~~~~~~~~~~~~~i~l~~~-----------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i  261 (272)
                        +.++.......|.++.+.+...           +   ...+...+++ +||.+.|..      .+.+++++..+++|+
T Consensus       339 ~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~Gv~v~~~~------~~~~~~~~~~t~~ei  411 (426)
T PRK00062        339 AKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLD-EGVYLAPSQ------FEAGFVSAAHTDEDI  411 (426)
T ss_pred             HHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHH-CCeEeecCC------cCceeeeccCCHHHH
Confidence              4465442222455555555311           1   1345555554 599997642      235678887899999


Q ss_pred             HHHHHHHHHhC
Q 036024          262 LEASRRLEALF  272 (272)
Q Consensus       262 ~~~l~~l~~~l  272 (272)
                      ++++++|++++
T Consensus       412 ~~~~~~l~~~l  422 (426)
T PRK00062        412 EKTLEAARKAF  422 (426)
T ss_pred             HHHHHHHHHHH
Confidence            99999998763

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.69  E-value=3.1e-15  Score=129.02  Aligned_cols=133  Identities=11%  Similarity=0.269  Sum_probs=95.7

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~  122 (272)
                      +++|+|++++|+||||.+++   +++|+++|+++++++|+|++|.......   ++ .+.  .+  ++++|+||.++ .+
T Consensus       135 ~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~---pl-~~g--aD--ivv~S~sK~l~G~~  203 (382)
T TIGR02080       135 QKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQN---PL-ALG--AD--LVLHSCTKYLNGHS  203 (382)
T ss_pred             cCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCC---ch-hhC--CC--EEEeecceeccCCC
Confidence            57899999999999999988   7889999999999999999997543221   22 221  12  88999999885 57


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      +++.|+++++++.+       .+.+...+.......++.....+.     .+.+.+..+.++..+++..+.+.|+.+
T Consensus       204 ~~~~G~i~~~~~~~-------~~~l~~~~~~~g~~~sp~~a~l~l-----r~l~tl~~R~~~~~~na~~~a~~L~~~  268 (382)
T TIGR02080       204 DVIAGAVIAKDPQV-------AEELAWWANNLGVTGGAFDSYLTL-----RGLRTLVARMRLQQRNAQAIVEYLQTQ  268 (382)
T ss_pred             CceeEEEEeCCHHH-------HHHHHHHHHccCCCCCHHHHHHHH-----cccchHHHHHHHHHHHHHHHHHHHHhC
Confidence            88999988755442       555555554444445555433222     233455666778889999999999986

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.69  E-value=2.2e-15  Score=130.45  Aligned_cols=168  Identities=19%  Similarity=0.248  Sum_probs=108.7

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+.     +...+...| +++.++++....    +++  .+++++|++++|+||||.+.+   +++|+++|+
T Consensus        99 d~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~----l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~  171 (391)
T TIGR01328        99 DHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEE----VKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAH  171 (391)
T ss_pred             CEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHH----HHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHH
Confidence            55666665332     344456678 888887752111    222  268899999999999999987   888999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhhhhh-
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRIICT-  153 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~-  153 (272)
                      ++|+++|+|++|......   .++ ...  .+  +++.|++|.+|.+|.++ |++++++++        ++.+...... 
T Consensus       172 ~~gi~livD~a~a~~~~~---~~~-~~g--~D--ivv~S~sK~lgg~g~~~gG~v~~~~~l--------i~~l~~~~~~~  235 (391)
T TIGR01328       172 SQGVKVIVDNTFATPMLT---NPV-ALG--VD--VVVHSATKYIGGHGDVVAGLICGKAEL--------LQQIRMVGIKD  235 (391)
T ss_pred             HcCCEEEEECCCchhccC---Cch-hcC--CC--EEEccccccccCCCCceEEEEEcCHHH--------HHHHHHHHHHh
Confidence            999999999999853322   122 111  12  88899999998788774 666666665        4444432211 


Q ss_pred             -ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          154 -CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       154 -~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                       .....+......+...+     +.+..+.++.+++++.+.+.|+++
T Consensus       236 ~~g~~l~~~~a~l~l~~L-----~tl~~r~~~~~~na~~la~~L~~~  277 (391)
T TIGR01328       236 MTGSVISPFDAWLILRGL-----KTLNIRMKRHSENAMKVAEYLKSH  277 (391)
T ss_pred             CCCCCCCcHHHHHHHhCc-----CcHHHHHHHHHHHHHHHHHHHHhC
Confidence             12223333333223222     233566788889999999999886

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.69  E-value=8.4e-15  Score=126.82  Aligned_cols=237  Identities=15%  Similarity=0.204  Sum_probs=147.3

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+.     +...++..| +++.++.+...    ++++  .+++++|++++|+||||.+.+   +++|.++|+
T Consensus        93 d~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~----~l~~~l~~~tklV~l~~p~NptG~~~d---l~~I~~la~  165 (390)
T PRK08064         93 DHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLE----EVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLAK  165 (390)
T ss_pred             CEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHH----HHHHhcCCCceEEEEECCCCCCcEecc---HHHHHHHHH
Confidence            56666665332     224456678 88888874211    1222  268899999999999999976   889999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ++++++|+|++|......   .++ .+.    ..+++.|++|.++ .+|...|+++++++.+       .+.+.......
T Consensus       166 ~~g~~vvvD~a~~~~~~~---~~~-~~g----~Divv~S~tK~~~G~~~~laG~~v~~~~~~-------~~~l~~~~~~~  230 (390)
T PRK08064        166 AIGCLTFVDNTFLTPLLQ---KPL-DLG----ADVVLHSATKFLAGHSDVLAGLAVVKDEEL-------AQKLYFLQNSF  230 (390)
T ss_pred             HcCCEEEEECCCCccccc---Cch-hhC----CcEEEeecceeccCCccceeEEEEeCCHHH-------HHHHHHHHHhc
Confidence            999999999998753221   122 221    2388999999985 3455678877765331       55555554433


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-C-eEecC----------------CCceEEEeec
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-I-KVYGG----------------INAPYVWAHF  216 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~----------------~~~~~~~i~l  216 (272)
                      ..  ....+.+.. .+  .+.+.+..+.++..+++..+.+.|++++ + +++.|                ..|..+.+++
T Consensus       231 g~--~~~~~~a~l-~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~  305 (390)
T PRK08064        231 GA--VLGVQDCWL-VL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTL  305 (390)
T ss_pred             CC--CCCHHHHHH-HH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEE
Confidence            32  222233232 22  3334567788888999999999999863 1 12111                1345677788


Q ss_pred             CCCChHHHHHHHHHhcCe---EeeCC------------CCCCC---------CCCCeEEEEccC--CHHHHHHHHHHHHH
Q 036024          217 PGRKSWDVFAEILEKTHI---TTVPG------------SGFGP---------GGEEYIRISGFG--HRESILEASRRLEA  270 (272)
Q Consensus       217 ~~~~~~~~~~~ll~~~gi---~v~~g------------~~~~~---------~~~~~~R~s~~~--~~~~i~~~l~~l~~  270 (272)
                      .+   .+....+++..++   .+.-|            +++..         -..+.+|+|++.  +++.++.+.++|++
T Consensus       306 ~~---~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~  382 (390)
T PRK08064        306 QS---EEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY  382 (390)
T ss_pred             CC---HHHHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence            63   2345566666676   44445            22221         115789999743  55556666666654

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.69  E-value=9.2e-15  Score=126.19  Aligned_cols=133  Identities=12%  Similarity=0.241  Sum_probs=100.2

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~  122 (272)
                      +++|+|++++|+||||.+++   +++|.++|+++++++|+|++|.....   ..++ .+.  .|  ++++|++|.++ .+
T Consensus       136 ~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~---~~pl-~~g--aD--ivv~S~tK~l~G~~  204 (386)
T PRK08045        136 EKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL---QNPL-ALG--AD--LVLHSCTKYLNGHS  204 (386)
T ss_pred             cCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc---CCch-hhC--CC--EEEeecceeccCCC
Confidence            68899999999999999988   78888999999999999999975432   1222 221  12  89999999885 56


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      +.+.|+++++++.+       .+.+...........++..+..+...++.     +..+.++..+++..+.+.|+.+
T Consensus       205 d~~~G~vi~~~~~~-------~~~l~~~~~~~g~~~~p~~~~l~~rgl~t-----l~~R~~~~~~na~~la~~L~~~  269 (386)
T PRK08045        205 DVVAGVVIAKDPDV-------VTELAWWANNIGVTGGAFDSYLLLRGLRT-----LVPRMELAQRNAQAIVKYLQTQ  269 (386)
T ss_pred             CceeEEEEeCcHHH-------HHHHHHHHHhcCCCCCHHHHHHHHhhhcc-----HHHHHHHHHHHHHHHHHHHHcC
Confidence            78899988754432       45555455555555677766666666653     5778899999999999999987

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.68  E-value=5.7e-15  Score=127.80  Aligned_cols=171  Identities=19%  Similarity=0.231  Sum_probs=107.4

Q ss_pred             cccccccCccc--ch---HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD--LE---DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~--~~---~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+.  +.   ..+...| +++.++......+.-.+  .+++|+|++++|+||||.+.+   +++|+++|+++
T Consensus       101 d~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i--~~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~  175 (388)
T PRK07811        101 DHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAI--TPRTKLIWVETPTNPLLSITD---IAALAELAHDA  175 (388)
T ss_pred             CEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhc--CcCCeEEEEECCCCCcceecC---HHHHHHHHHHc
Confidence            56666655444  22   2233456 66666653111111111  268999999999999998755   99999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      ++++|+|++|......   .++ ...  .+  +++.|++|.++.+| .+.||++++++.+       .+.+.........
T Consensus       176 gi~lIvD~a~a~~~~~---~p~-~~g--aD--ivv~S~sK~l~g~~~~~gG~vv~~~~~l-------~~~~~~~~~~~g~  240 (388)
T PRK07811        176 GAKVVVDNTFASPYLQ---QPL-ALG--AD--VVVHSTTKYIGGHSDVVGGALVTNDEEL-------DEAFAFLQNGAGA  240 (388)
T ss_pred             CCEEEEECCCCccccC---Cch-hhC--Cc--EEEecCceeecCCCCcEEEEEEECCHHH-------HHHHHHHHHhcCC
Confidence            9999999999754322   122 121  12  89999999998544 5679988876542       3444433333233


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ..+......+...+     +.+..+.++.++++..+.+.|+++
T Consensus       241 ~~s~~~a~l~~~~L-----~tl~~R~~~~~~na~~la~~L~~~  278 (388)
T PRK07811        241 VPGPFDAYLTLRGL-----KTLAVRMDRHSENAEAVAEFLAGH  278 (388)
T ss_pred             CCCHHHHHHHHhcc-----CcHHHHHHHHHHHHHHHHHHHHhC
Confidence            23333322222222     334667777889999999999987

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.68  E-value=3.4e-15  Score=131.25  Aligned_cols=207  Identities=14%  Similarity=0.084  Sum_probs=136.4

Q ss_pred             CCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      .++.++++...++..| ..++++.+++|.++|++||+++|.||++.++...+...........+|.+    +++|.+| .
T Consensus       205 ~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv----~~gK~l~-~  279 (442)
T TIGR00709       205 DKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFV----VMSKAVG-G  279 (442)
T ss_pred             CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEE----EEccccc-C
Confidence            4566666664444445 55799999999999999999999999999886665444433444344532    2799998 6


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      |+++|+++++++. ..        +.......+++.+++++.|+.+.++....   +...++.+++.+++++.|+++   
T Consensus       280 G~Pigav~~~~~~-~~--------~~~~~~~~T~~gnpla~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~  347 (442)
T TIGR00709       280 GLPLAVLLIAPEF-DA--------WQPAGHTGTFRGNQLAMVTGTEALNYWKD---DNLAQNAQERGERITSFLDDMIKE  347 (442)
T ss_pred             CcccEEEEEchHH-hc--------cCCCcCCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999998773 21        11112345666899999999999873222   345567777777777777654   


Q ss_pred             -CCeEecCCCceEEEeecCCCC---------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHH
Q 036024          200 -GIKVYGGINAPYVWAHFPGRK---------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESI  261 (272)
Q Consensus       200 -g~~~~~~~~~~~~~i~l~~~~---------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i  261 (272)
                       ++...--..|.++.+.+....               ...+...++ ++|+.+.+....    .+.+|+.  +..|++|+
T Consensus       348 ~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~~----~~~l~~~Ppl~it~~ei  422 (442)
T TIGR00709       348 HPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACF-ENGLLLETGGRE----GEVFRLLCPITIDQEEC  422 (442)
T ss_pred             CCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHH-HCCeEEeecCCC----CCEEEEECCCCCCHHHH
Confidence             221111124666667663210               122334444 459998753211    3678887  45699999


Q ss_pred             HHHHHHHHHhC
Q 036024          262 LEASRRLEALF  272 (272)
Q Consensus       262 ~~~l~~l~~~l  272 (272)
                      ++++++++++|
T Consensus       423 ~~~~~~l~~~l  433 (442)
T TIGR00709       423 EEGISRFKQAV  433 (442)
T ss_pred             HHHHHHHHHHH
Confidence            99999998764

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.68  E-value=3.6e-15  Score=129.62  Aligned_cols=168  Identities=17%  Similarity=0.248  Sum_probs=110.0

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+.     +...+...| +++.++.+....    +++  .+++|+|++.+|+||||.+.+   +++|+++|+
T Consensus       105 d~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~----l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~  177 (403)
T PRK07503        105 DEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAA----LKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAH  177 (403)
T ss_pred             CEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHH----HHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHH
Confidence            56667665443     223455678 888887742111    222  268999999999999999977   899999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhh--hh
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRI--IC  152 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~  152 (272)
                      ++|+++|+|++|......   .++ ....    .++++|+||.+|.+| .+.|+++.++++        .+++...  ..
T Consensus       178 ~~gi~lIvD~a~a~~~~~---~~l-~~g~----Di~v~S~tK~l~g~gd~~gG~v~~~~~l--------~~~l~~~~~~~  241 (403)
T PRK07503        178 GAGAKVVVDNTYCTPYLQ---RPL-ELGA----DLVVHSATKYLGGHGDITAGLVVGGKAL--------ADRIRLEGLKD  241 (403)
T ss_pred             HcCCEEEEECCCcccccC---Cch-hhCC----CEEEccccccccCCCceeEEEEEcCHHH--------HHHHHhhhHHh
Confidence            999999999999853221   222 2211    289999999998655 778888876665        4444422  22


Q ss_pred             hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ......+......+.+.+     +.+..+.++..+++..+.+.|+++
T Consensus       242 ~~g~~~s~~~a~l~l~~L-----~tl~~r~~~~~~na~~~a~~L~~~  283 (403)
T PRK07503        242 MTGAVMSPFDAFLLMRGL-----KTLALRMDRHCASAQAVAEWLARH  283 (403)
T ss_pred             CcCCCCCHHHHHHHHcCc-----chHHHHHHHHHHHHHHHHHHHHhC
Confidence            223334444433333322     344556666678899999999876

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.68  E-value=2.5e-15  Score=128.72  Aligned_cols=243  Identities=15%  Similarity=0.105  Sum_probs=163.7

Q ss_pred             cccccCccc-chHHhcccceeEEeecCCCCCc--ccCCCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            6 SVIVGQAGD-LEDEVGKYCNIEYLECGPGNNF--FPDLKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~--~~dl~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      +++.+.|+. +.+.++++|....+..++..+.  .+++++   .++++++.+++..|.||+..+  ++.+|      +++
T Consensus        96 ~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~~i------~g~  167 (360)
T PRK05355         96 YVDTGSWSKKAIKEAKKYGEVNVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELPDT------GDV  167 (360)
T ss_pred             EEECCHHHHHHHHHHHHhCCceEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEecC--ccccc------CCC
Confidence            445566666 7778888894355555532232  223222   257899999999999999974  35555      899


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcch--HHHHHhhh--hhcc
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPV--INDFNRII--CTCF  155 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~  155 (272)
                      ++++|.+.+.   ++.+..+..+    +  +++.|..|.+|.+|  +|.++++++.+....+..  .-.+....  ..+.
T Consensus       168 l~vVDavss~---g~~~idv~~~----d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~  236 (360)
T PRK05355        168 PLVADMSSDI---LSRPIDVSKF----G--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYKTHADNDSMY  236 (360)
T ss_pred             cEEEEcCccc---cCccCCHHHc----c--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHHHHHHHhcCCcc
Confidence            9999999875   3333444443    2  88889999999778  799999998864422211  11111111  2234


Q ss_pred             CCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCCCe-EecC---CCceEEEeecCCC-ChHHHHHHHH
Q 036024          156 NGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLGIK-VYGG---INAPYVWAHFPGR-KSWDVFAEIL  229 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~---~~~~~~~i~l~~~-~~~~~~~~ll  229 (272)
                      .+++....+++.++++..... .++++.++.++.++++++.|+++|+. ...+   .....+.+.+++. ...++...+.
T Consensus       237 ~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~  316 (360)
T PRK05355        237 NTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEELDKKFLAEAK  316 (360)
T ss_pred             CCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHHHHHHHHHHH
Confidence            668888888888888754445 57999999999999999999999752 2121   2235577777753 2234444444


Q ss_pred             HhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          230 EKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                       +.|+.+.+|..    ..+.+|+|+  +++.+|++++++.|++++
T Consensus       317 -~~Gi~~~~~~~----~~g~vRiS~~~~nt~eei~~l~~~l~~~~  356 (360)
T PRK05355        317 -AAGLVGLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFE  356 (360)
T ss_pred             -HCCCcccCCCC----ccCcEEEECCCCCCHHHHHHHHHHHHHHH
Confidence             45998866653    247899996  568999999999998863

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.68  E-value=4.5e-15  Score=127.23  Aligned_cols=241  Identities=15%  Similarity=0.127  Sum_probs=157.0

Q ss_pred             ccccCccc-chHHhcccc-eeEEeecCCCCCc-c-cC---CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            7 VIVGQAGD-LEDEVGKYC-NIEYLECGPGNNF-F-PD---LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         7 ~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~-~-~d---l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      ++.+++.. +...+++.| +++.++.++++++ . +|   .+..+++++|.+++.+|.||..++        ++++.+|+
T Consensus        93 i~~g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~--------~i~~~~g~  164 (355)
T cd00611          93 VVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD--------EVPDTGGV  164 (355)
T ss_pred             EECCHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc--------eecccCCC
Confidence            44455544 444778889 8999988654334 2 33   222478999999999999999743        33445999


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHH--HHHh-hh-hhcc
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN--DFNR-II-CTCF  155 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~--~~~~-~~-~~~~  155 (272)
                      ++++|.+.+.   +..+..+..++      +...|..|.+|.+|  +|.++++++.+....+....  .+.. .. ....
T Consensus       165 ~~~VDa~qs~---g~~~idv~~~~------~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (355)
T cd00611         165 PLVADMSSNI---LSRPIDVSKFG------VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLY  233 (355)
T ss_pred             eEEEEccccc---cCCCCCHHHhC------EEEeecccccCCCc--eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCC
Confidence            9999999975   22233343332      45566899999888  79999988775432111000  1111 01 1124


Q ss_pred             CCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhC-CCe-Ee-cC--CCceEEEeecCCC-ChHHHHHHH
Q 036024          156 NGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASL-GIK-VY-GG--INAPYVWAHFPGR-KSWDVFAEI  228 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~~--~~~~~~~i~l~~~-~~~~~~~~l  228 (272)
                      .+++.....++.++++..... .++++.++.+++++++++.|+++ |+. .. .+  ..+..+.+++++. ...++... 
T Consensus       234 ~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l~~~~~~~-  312 (355)
T cd00611         234 NTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEELEKEFLKE-  312 (355)
T ss_pred             CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhhhHHHHHH-
Confidence            467777777777777643334 47899999999999999999998 853 21 11  1234577777753 12333333 


Q ss_pred             HHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          229 LEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      +.+.|+.+.++..    ..+.+|+|+  +++++|++++++.|+++
T Consensus       313 ~~r~G~~~~~~~~----~~g~vR~S~~~~nt~edi~~l~~al~~~  353 (355)
T cd00611         313 AEAAGMIGLKGHR----SVGGIRASIYNALSLEGVQALADFMKEF  353 (355)
T ss_pred             HHHCCCcccCCCc----ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence            3455998665553    246899996  45999999999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.68  E-value=5.3e-15  Score=129.63  Aligned_cols=205  Identities=15%  Similarity=0.090  Sum_probs=134.7

Q ss_pred             CCceEEEEec-CCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCS-PNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~-p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++.++++.. .++.+|... +++.+++|.++|++||+++|+||++.++...+...........+|    +.+++|.++ 
T Consensus       198 ~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pD----i~~~~K~l~-  272 (423)
T PRK05964        198 GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPD----IMCLSKGLT-  272 (423)
T ss_pred             CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCC----eeeeehhhh-
Confidence            4555666654 477778766 889999999999999999999999987654442222122222333    236799997 


Q ss_pred             Cc-cceeEEEecccccccCCcchHHHHHh------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024          122 TG-VRLGWTVVPEELLFSSGFPVINDFNR------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID  194 (272)
Q Consensus       122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  194 (272)
                      .| +++|+++++++.        .+.+..      ....++++.++++..++.+.++....   +...++.+++.+++++
T Consensus       273 gG~~p~~av~~~~~i--------~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~  341 (423)
T PRK05964        273 GGYLPLAATLCTAEI--------FEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFED---EPVLERVAALSAGLAE  341 (423)
T ss_pred             cCcccceEEEEcHHH--------HHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence            55 899998888877        333321      12233445778888877777763222   2355667777777777


Q ss_pred             HHHhC-CCeEec--CCCceEEEeecCCCC----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHH
Q 036024          195 TLASL-GIKVYG--GINAPYVWAHFPGRK----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEAS  265 (272)
Q Consensus       195 ~L~~~-g~~~~~--~~~~~~~~i~l~~~~----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l  265 (272)
                      .|+++ ......  ...|.++.+.+....    ...+...+.+ +||.+.+..       +.+|++.  ..+++|+++++
T Consensus       342 ~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~-~Gv~v~~~~-------~~lR~~p~l~~t~edId~~v  413 (423)
T PRK05964        342 GLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPALRAFALE-RGVLLRPLG-------NTIYLMPPYIITAEELDRIT  413 (423)
T ss_pred             HHHhhccCCCeEEeecccEEEEEEeccCcchhHHHHHHHHHHH-CCeEEEecC-------CEEEEeCCcccCHHHHHHHH
Confidence            77665 222111  124667777776432    3455555555 499997631       4799994  57999999999


Q ss_pred             HHHHHhC
Q 036024          266 RRLEALF  272 (272)
Q Consensus       266 ~~l~~~l  272 (272)
                      ++|++++
T Consensus       414 ~~l~~al  420 (423)
T PRK05964        414 DAIVEVA  420 (423)
T ss_pred             HHHHHHH
Confidence            9998864

>PRK05968 hypothetical protein; Provisional

Probab=99.67  E-value=7.6e-15  Score=127.06  Aligned_cols=239  Identities=15%  Similarity=0.108  Sum_probs=142.6

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+.     +...+...| +++.++.+....+.   +..+++|+|++.+|+||++   +..++++|+++|+++
T Consensus       103 d~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~---~~i~~tklV~ie~pt~~~~---~~~dl~~i~~la~~~  176 (389)
T PRK05968        103 DRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVA---KALPGAKLLYLESPTSWVF---ELQDVAALAALAKRH  176 (389)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHH---HhcccCCEEEEECCCCCCC---cHHHHHHHHHHHHHc
Confidence            55666554333     234556678 88887654111111   1236789999987666655   557899999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhh-hcc
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIIC-TCF  155 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  155 (272)
                      ++++|+|++|.......   ++ ... .   .+++.|++|.++.+| .+.|+++.++++        ++.+..... ...
T Consensus       177 gi~vivD~a~a~~~~~~---p~-~~g-~---Divv~S~tK~l~g~~~~~gG~i~~~~~~--------~~~l~~~~~~~~g  240 (389)
T PRK05968        177 GVVTMIDNSWASPVFQR---PI-TLG-V---DLVIHSASKYLGGHSDTVAGVVAGSKEH--------IARINAEAYPYLG  240 (389)
T ss_pred             CCEEEEECCCcchhccC---ch-hcC-C---cEEEeeccccccCCCCeEEEEEEECHHH--------HHHHHHHHHHhCC
Confidence            99999999997644222   22 121 1   278889999998644 578988877776        444443222 122


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecC-----------CCceEEEeecCC-CCh
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGG-----------INAPYVWAHFPG-RKS  221 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-----------~~~~~~~i~l~~-~~~  221 (272)
                      ...+......+...++     .+..+.++..++++.+.+.|+++ ++. +..|           ..+..+.+++++ ...
T Consensus       241 ~~~~~~~A~~~l~~L~-----tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~  315 (389)
T PRK05968        241 AKLSPFEAWLLLRGLR-----TLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDV  315 (389)
T ss_pred             CCCChHHHHHHHcccC-----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHH
Confidence            2344444443333333     34666677778899999999987 553 3322           124467777763 233


Q ss_pred             HHHHHHHHHhcCeEeeCCCCCC---C------------------CCCCeEEEEccC-CHHH-HHHHHHHHHH
Q 036024          222 WDVFAEILEKTHITTVPGSGFG---P------------------GGEEYIRISGFG-HRES-ILEASRRLEA  270 (272)
Q Consensus       222 ~~~~~~ll~~~gi~v~~g~~~~---~------------------~~~~~~R~s~~~-~~~~-i~~~l~~l~~  270 (272)
                      .++. ..++..++.+.-|..+.   |                  ...+.+|+|+.. ..+| ++.+.++|++
T Consensus       316 ~~f~-~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~  386 (389)
T PRK05968        316 RAFA-DALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAA  386 (389)
T ss_pred             HHHH-HhCCccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence            3333 34455577776666554   1                  014789999754 3333 4444444443

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.67  E-value=1.2e-14  Score=128.45  Aligned_cols=213  Identities=13%  Similarity=0.080  Sum_probs=132.1

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      .+++++++.  ++.+|...+   +++|.++|+++|+++++|++|.......+..+. ...   +.-++++|.+|+++.|.
T Consensus       181 ~~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~-~~~---~~D~l~~S~hK~l~GP~  251 (452)
T PTZ00094        181 FRPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPS-PFP---YADVVTTTTHKSLRGPR  251 (452)
T ss_pred             hCCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCC-CCC---CCcEEEcCCccCCCCCC
Confidence            367777664  335888877   788888999999999999999864443321111 111   11288999999773132


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhh-hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIIC-TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK  202 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~  202 (272)
                        .|++.++++....    +...+..... ....+++.....++.+.++.......++.++++.++++++.+.|.+.|++
T Consensus       252 --Gg~l~~~~~~~~~----l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~  325 (452)
T PTZ00094        252 --SGLIFYRKKVKPD----IENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYD  325 (452)
T ss_pred             --ceEEEEecccchH----HHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcE
Confidence              3887876654210    1111111111 11123444555555555553322345778899999999999999888988


Q ss_pred             EecCC-CceEEEeecC--CCChHHHHHHHHHhcCeEe-eCCCCCCC--CCCCeEEEEc--cCC----HHHHHHHHHHHHH
Q 036024          203 VYGGI-NAPYVWAHFP--GRKSWDVFAEILEKTHITT-VPGSGFGP--GGEEYIRISG--FGH----RESILEASRRLEA  270 (272)
Q Consensus       203 ~~~~~-~~~~~~i~l~--~~~~~~~~~~ll~~~gi~v-~~g~~~~~--~~~~~~R~s~--~~~----~~~i~~~l~~l~~  270 (272)
                      +..+. ......+.+.  +.+. +.+..+|+++||.+ .++..+.+  ..++.+|+|+  .++    ++|++++++.|++
T Consensus       326 v~~~~~~~~~~~v~~~~~~~~~-~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~  404 (452)
T PTZ00094        326 LVTGGTDNHLVLVDLRPFGITG-SKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDR  404 (452)
T ss_pred             EecCCCCCceEeecCCcCCCCH-HHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence            87532 1334444554  4344 45556667789999 45544432  2357899995  344    8999999999887


Q ss_pred             hC
Q 036024          271 LF  272 (272)
Q Consensus       271 ~l  272 (272)
                      ++
T Consensus       405 ~~  406 (452)
T PTZ00094        405 AV  406 (452)
T ss_pred             HH
Confidence            53

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.67  E-value=6.7e-15  Score=129.34  Aligned_cols=206  Identities=15%  Similarity=0.121  Sum_probs=134.9

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.+|++-..++..|.. .+++.+++|.++|++||+++|+||++.++...+...........+|    +-+++|.+| .
T Consensus       206 ~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pD----i~t~gK~l~-~  280 (445)
T PRK08593        206 DEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPD----LMSFGKSLA-G  280 (445)
T ss_pred             CceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCC----Eeeeccccc-C
Confidence            456666666667777886 6888899999999999999999999987654443222222322344    337899998 8


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      |+++|+++++++.        .+.+.......+.+.++++..++.+.++....   +...++.+++.+++++.|+++   
T Consensus       281 G~p~gav~~~~~i--------~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~  349 (445)
T PRK08593        281 GMPMSAIVGRKEI--------MESLEAPAHLFTTGANPVSCAAALATIDMIED---ESLLQRSAEKGEYARKRFDQWVSK  349 (445)
T ss_pred             CcccEEEEEcHHH--------HhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhc
Confidence            8999999999887        33333222334555778888878888763322   345666777777777777653   


Q ss_pred             -CCeEecCCCceEEEeecCCC------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHH
Q 036024          200 -GIKVYGGINAPYVWAHFPGR------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRR  267 (272)
Q Consensus       200 -g~~~~~~~~~~~~~i~l~~~------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~  267 (272)
                       ++...-...|.++.+.+...      +   ...+...++++ ||.+.+..      .+.+|++.  ..|++|+++++++
T Consensus       350 ~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~~------~~~lr~~p~l~~t~~~id~~~~~  422 (445)
T PRK08593        350 YNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEH-GVVIIAVA------GNVLRFQPPLVITYEQLDTALNT  422 (445)
T ss_pred             CCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHC-CeEEeccC------CCEEEEECCCccCHHHHHHHHHH
Confidence             22111112355555555310      1   23455555554 99986531      35789884  5699999999999


Q ss_pred             HHHhC
Q 036024          268 LEALF  272 (272)
Q Consensus       268 l~~~l  272 (272)
                      +++++
T Consensus       423 l~~~l  427 (445)
T PRK08593        423 IEQAF  427 (445)
T ss_pred             HHHHH
Confidence            98763

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=99.67  E-value=2.9e-16  Score=127.02  Aligned_cols=225  Identities=16%  Similarity=0.177  Sum_probs=166.7

Q ss_pred             cccccCccc-chHHhcccc-eeEEeecCCCCCcccC-------CCCCCCceEEEEe-cCCCccccCCCHHHHHHHHHHHH
Q 036024            6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-------LKGTSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-------l~~~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      +.++.|+|+ -...+...| .+..+..-...-..+|       +.+.+.-..|++. ..|||||+-.+.+.+++|.++.+
T Consensus       149 I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~  228 (427)
T KOG1411|consen  149 IYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIK  228 (427)
T ss_pred             eeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhh
Confidence            456667777 445556666 5544433322122223       3344555566665 66999999999999999999999


Q ss_pred             HcCCEEEEcccCCccccCCCC---CCccccCCCCCceEEEecCccccCCCccceeEE--EecccccccCCcchHHHHHhh
Q 036024           76 NNGSIIIFDSAYAAYVTDGCP---RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWT--VVPEELLFSSGFPVINDFNRI  150 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~--~~~~~~~~~~~~~~~~~~~~~  150 (272)
                      +.+.+-+.|.+|++|..+...   ..+.-......++++..|++|.+|+-|-|+|.+  ++.++.   ...++..++...
T Consensus       229 ~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad---~A~rV~SQlk~l  305 (427)
T KOG1411|consen  229 EKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDAD---EAKRVESQLKIL  305 (427)
T ss_pred             hccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHH---HHHHHHHHHHHH
Confidence            999999999999998876432   222223334466899999999999999999994  554444   445667788888


Q ss_pred             hhhccCCcchHHHHHHHHhcccccH-----HHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCCCh
Q 036024          151 ICTCFNGASNIAQAGGLACLSSEGL-----EAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGRKS  221 (272)
Q Consensus       151 ~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~~~  221 (272)
                      ...+.++++..+..++..++.+...     ..++-+.+++..++..+.+.|...|    |+....+-|+|++-.+..   
T Consensus       306 iRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~p---  382 (427)
T KOG1411|consen  306 IRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNP---  382 (427)
T ss_pred             hcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCH---
Confidence            8888888999999999999986542     4577788899999999999998864    555666789999877753   


Q ss_pred             HHHHHHHHHhcCeEee
Q 036024          222 WDVFAEILEKTHITTV  237 (272)
Q Consensus       222 ~~~~~~ll~~~gi~v~  237 (272)
                       +.+..|.+++.|++.
T Consensus       383 -eQv~~l~ke~~iYmT  397 (427)
T KOG1411|consen  383 -EQVDWLTKEYHIYLT  397 (427)
T ss_pred             -HHHHHHHhhheeeec
Confidence             678889999999985

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.66  E-value=2.3e-14  Score=114.69  Aligned_cols=254  Identities=17%  Similarity=0.142  Sum_probs=177.3

Q ss_pred             cccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      |+..+.|+. +.+..+++| ++.+++.+...+..++ +.+   .++++++++++....||+.-+  -+..+.++|++|++
T Consensus        97 v~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~--~~~~~g~lc~k~~~  174 (385)
T KOG2862|consen   97 VVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQD--LLAISGELCHKHEA  174 (385)
T ss_pred             EEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccch--HHHHHHHHhhcCCe
Confidence            344566666 778889999 9999998877666555 222   389999999999999999843  25667788999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC-ccceeEEEecccccccCCc-------chHHHH---H
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT-GVRLGWTVVPEELLFSSGF-------PVINDF---N  148 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~-g~r~G~~~~~~~~~~~~~~-------~~~~~~---~  148 (272)
                      ++++|.+-+-   ++.+.-..++..+    +......|++|+| |  ++-+..++....+...       -+.+..   .
T Consensus       175 lllVD~VaSl---ggt~F~mDewgVD----vaytgSQKaL~aP~G--LsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~  245 (385)
T KOG2862|consen  175 LLLVDTVASL---GGTEFEMDEWGVD----VAYTGSQKALGAPAG--LSIISFSDKALEAIRDRKTKPVSFYFDILRLGN  245 (385)
T ss_pred             EEEEechhhc---CCccceehhhccc----EEEecchhhcCCCCC--cceeecCHHHHHHHhhccCCceEEEEeHHhhcc
Confidence            9999999764   4444445555432    5555558999864 5  3445554444211000       000000   0


Q ss_pred             hhh-----hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC----ceEEEeecC-C
Q 036024          149 RII-----CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN----APYVWAHFP-G  218 (272)
Q Consensus       149 ~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~----~~~~~i~l~-~  218 (272)
                      .+.     ...+.+++....+.+.++|....++.+++.+++.+++.+.++..|+++|++......    .....+..| +
T Consensus       246 ~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~g  325 (385)
T KOG2862|consen  246 FWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYG  325 (385)
T ss_pred             hhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCC
Confidence            001     234456788888888888887778899999999999999999999999987644222    112334455 6


Q ss_pred             CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cC-CHHHHHHHHHHHHHhC
Q 036024          219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FG-HRESILEASRRLEALF  272 (272)
Q Consensus       219 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~-~~~~i~~~l~~l~~~l  272 (272)
                      .+..+....+..++++.+.-|.  ++.....+||++  ++ +.|.++..++.|+.++
T Consensus       326 vDw~dVv~~~~~~~~vei~ggl--g~~~gKv~RIGl~gcna~~e~i~~v~~ll~~al  380 (385)
T KOG2862|consen  326 VDWKDVVAYAMSHYVVEIGGGL--GPTVGKVFRIGLLGCNANVEYIDNVVELLKLAL  380 (385)
T ss_pred             CCHHHHHHHHHHhcCEEecccc--CCCcccEEEEEEeeccCCcHHHHHHHHHHHHHH
Confidence            7888999999999898885544  566678999995  33 7888988888887653

>PRK06541 hypothetical protein; Provisional

Probab=99.66  E-value=1.3e-14  Score=127.87  Aligned_cols=206  Identities=16%  Similarity=0.172  Sum_probs=136.6

Q ss_pred             CceEEEEecC-CCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           45 RTDIIFFCSP-NNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        45 ~~~~i~~~~p-~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +..+.+++.| ++++|.+.+ ++.+++|.++|+++|+++|+||++.++...+...........+|  ++  +++|.+| .
T Consensus       220 ~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PD--iv--t~gK~l~-~  294 (460)
T PRK06541        220 DTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPD--II--TCAKGIT-S  294 (460)
T ss_pred             CCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCC--EE--Eeccccc-C
Confidence            3445555666 999998865 88899999999999999999999976633332222222222344  22  5899998 8


Q ss_pred             cc-ceeEEEecccccccCCcchHHHHHh----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024          123 GV-RLGWTVVPEELLFSSGFPVINDFNR----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA  197 (272)
Q Consensus       123 g~-r~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~  197 (272)
                      |+ ++|+++++++.        .+.+..    .....+.+.++++..++.+.++....   +...++++++.++|++.|+
T Consensus       295 G~~pigav~~~~~i--------~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~---~~~~~~~~~~g~~l~~~L~  363 (460)
T PRK06541        295 GYSPLGAMIASDRL--------FEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFER---EGLLDHVRDNEPAFRATLE  363 (460)
T ss_pred             CccceeEEEEcHHH--------HHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Confidence            87 99999999888        333322    12233555677887777777763222   3456788888889988888


Q ss_pred             hC-CCeE---ecCCCceEEEeecCCC-------Ch--------HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cC
Q 036024          198 SL-GIKV---YGGINAPYVWAHFPGR-------KS--------WDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FG  256 (272)
Q Consensus       198 ~~-g~~~---~~~~~~~~~~i~l~~~-------~~--------~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~  256 (272)
                      ++ ...+   .. ..|.+..+.+...       ..        ..+...++++ ||.+.+.    +.+...+||+.  ..
T Consensus       364 ~l~~~~~v~~vr-g~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~g~~~lrl~Ppl~~  437 (460)
T PRK06541        364 KLLDLPIVGDVR-GDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEA-GLYCRAD----DRGDPVVQLAPPLIS  437 (460)
T ss_pred             HhhcCCCeEEEE-ecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhC-CeEEEec----CCCCCEEEEECCCCC
Confidence            76 2222   22 2466666666310       00        1234455554 9999762    12346799995  46


Q ss_pred             CHHHHHHHHHHHHHhC
Q 036024          257 HRESILEASRRLEALF  272 (272)
Q Consensus       257 ~~~~i~~~l~~l~~~l  272 (272)
                      +++|+++++++|++++
T Consensus       438 t~~~id~~~~~l~~~l  453 (460)
T PRK06541        438 GQEEFDEIEQILRSVL  453 (460)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            9999999999998764

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.65  E-value=1.5e-14  Score=124.85  Aligned_cols=227  Identities=16%  Similarity=0.124  Sum_probs=139.8

Q ss_pred             cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. ...    .+...| +++.++......+.--+  .+++|++++++|+||||.+.+   +++|+++|+++
T Consensus        86 d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i--~~~tklv~le~psnptg~v~d---l~~I~~la~~~  160 (378)
T TIGR01329        86 DEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAAL--GPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQ  160 (378)
T ss_pred             CEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhc--CcCceEEEEECCCCCCCeeec---HHHHHHHHHHc
Confidence            55666654333 222    345578 88888874221221112  268999999999999999976   99999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++|+|++|.....   ..++ .+..  |  +++.|++|.++. .+.+.|+++++++..       .+.+...+.....
T Consensus       161 g~~vivD~a~~~~~~---~~~l-~~g~--D--i~v~S~tK~l~G~~~~~~G~v~~~~~~~-------~~~~~~~~~~~G~  225 (378)
T TIGR01329       161 NALVVVDNTMMSPLL---CNPL-ELGA--D--IVYHSATKFLAGHSDVMAGVLAVKGEEI-------AKKVYFLQNSTGS  225 (378)
T ss_pred             CCEEEEECCCccccc---CChh-hcCC--c--EEEEecceeccCCccceeEEEEeCcHHH-------HHHHHHHHHhcCC
Confidence            999999999853211   1222 2221  2  899999998853 457789998866552       3445444432333


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eEec----------------CCCceEEEeecCC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GI-KVYG----------------GINAPYVWAHFPG  218 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~----------------~~~~~~~~i~l~~  218 (272)
                      ..++....     +.....+.+..+.++..++...+.+.|+++ .+ ++..                ...+..+.+++.+
T Consensus       226 ~~~~~~a~-----l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~  300 (378)
T TIGR01329       226 GLAPFDCW-----LLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS  300 (378)
T ss_pred             cCCHHHHH-----HHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC
Confidence            23333221     111223455677788888888888888875 22 1211                1134567778854


Q ss_pred             CC-hHHHHHHHHHhcCeEeeCCCCCCC---------------------CCCCeEEEEccC
Q 036024          219 RK-SWDVFAEILEKTHITTVPGSGFGP---------------------GGEEYIRISGFG  256 (272)
Q Consensus       219 ~~-~~~~~~~ll~~~gi~v~~g~~~~~---------------------~~~~~~R~s~~~  256 (272)
                      .. ..++... ++..+|.++-|...+.                     -.++.+|+|+..
T Consensus       301 ~~~~~~~~~~-L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl  359 (378)
T TIGR01329       301 VALSKRLVEA-TKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI  359 (378)
T ss_pred             HHHHHHHHHh-CcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc
Confidence            33 3344444 4777888877765430                     014689999865

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.65  E-value=1.1e-14  Score=136.55  Aligned_cols=219  Identities=16%  Similarity=0.121  Sum_probs=141.5

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHc-----CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccc
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN-----GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKF  118 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-----~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  118 (272)
                      ++++++.+++.+|-||.+.|.+.++.+.+.++.+     ++++++|.+++.   +..+..+..+..  |  ++..|++|.
T Consensus       191 ~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~---g~~piDv~~~~~--D--fl~~S~HK~  263 (805)
T PLN02724        191 EAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC---GTSPPDLSRYPA--D--FVVVSFYKI  263 (805)
T ss_pred             CCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc---CCCCCChhhcCC--C--EEEEeccee
Confidence            3567999999999999999965444333332222     368999999874   222334444432  2  889999999


Q ss_pred             cC-CCccceeEEEecccccccCCcchHHH-----------H----H-hhhhhccCCcchHHHHHHHHhcccccHHHHHHH
Q 036024          119 SG-FTGVRLGWTVVPEELLFSSGFPVIND-----------F----N-RIICTCFNGASNIAQAGGLACLSSEGLEAVHSV  181 (272)
Q Consensus       119 ~g-~~g~r~G~~~~~~~~~~~~~~~~~~~-----------~----~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  181 (272)
                      +| ..|  +|+++++++......+.....           +    . .....-..+++..+..++.++++-......+++
T Consensus       264 ~GgP~G--~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I  341 (805)
T PLN02724        264 FGYPTG--LGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAI  341 (805)
T ss_pred             ccCCCC--ceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHH
Confidence            98 446  899998887632211110000           0    0 000111223555555555555542222245788


Q ss_pred             HHHHHHHHHHHHHHHHhC-------CCeEecCC--------CceEEEeecCCCCh----HHHHHHHHHhcCeEeeCCCCC
Q 036024          182 VDYYKENTKILIDTLASL-------GIKVYGGI--------NAPYVWAHFPGRKS----WDVFAEILEKTHITTVPGSGF  242 (272)
Q Consensus       182 ~~~~~~~~~~l~~~L~~~-------g~~~~~~~--------~~~~~~i~l~~~~~----~~~~~~ll~~~gi~v~~g~~~  242 (272)
                      .++.++..+++.+.|+++       +++++++.        .+..+.+++.+.++    ...+..++.++||.++.|.+|
T Consensus       342 ~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~C  421 (805)
T PLN02724        342 AMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFC  421 (805)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeecccc
Confidence            899999999999999876       37777643        35677777764332    233667778889999999988


Q ss_pred             CCC---------------------------------CCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          243 GPG---------------------------------GEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       243 ~~~---------------------------------~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      .+.                                 ..+.+|+|+  ++|.+|++++++.|++.
T Consensus       422 a~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~  485 (805)
T PLN02724        422 NPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISS  485 (805)
T ss_pred             CchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHH
Confidence            632                                 138899996  67999999999999874

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.65  E-value=2.2e-14  Score=122.93  Aligned_cols=236  Identities=18%  Similarity=0.130  Sum_probs=143.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...+...| +++.++.+++ .+.+|++.     .++++++++++   |+|...+   +++|.++|++
T Consensus        59 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~---~~~i~~l~~~  131 (352)
T cd00616          59 DEVIVPSFTFVATANAILLLGATPVFVDIDPD-TYNIDPELIEAAITPRTKAIIPVH---LYGNPAD---MDAIMAIAKR  131 (352)
T ss_pred             CEEEeCCcchHHHHHHHHHcCCeEEEEecCCC-cCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCC---HHHHHHHHHH
Confidence            45565555444 556667788 9999998763 45555333     26788888864   6898766   8888999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +++++|+|++|....... ...+...   .+  +.+.|++  |.++  +.+.|+++.+++.+       .+.+.......
T Consensus       132 ~~i~li~D~a~~~g~~~~-~~~~~~~---~d--~~~~S~~~~K~~~--~~~gg~~~~~~~~~-------~~~~~~~~~~~  196 (352)
T cd00616         132 HGLPVIEDAAQALGATYK-GRKVGTF---GD--AGAFSFHPTKNLT--TGEGGAVVTNDEEL-------AERARLLRNHG  196 (352)
T ss_pred             cCCeEEEECCCCCCCeEC-CEEcccC---cc--eeEEcCCCCCCCc--ccCceEEEECCHHH-------HHHHHHHHHcC
Confidence            999999999998532211 1111111   12  5666766  8884  22468888875331       33332222111


Q ss_pred             ---------------cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC-----ceEEE
Q 036024          155 ---------------FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN-----APYVW  213 (272)
Q Consensus       155 ---------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-----~~~~~  213 (272)
                                     ....+.+.  ++....   ....+++..++.+++.+++++.|+++ |+++..+..     ...+.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~--aa~~~~---~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~  271 (352)
T cd00616         197 RDRDRFKYEHEILGYNYRLSEIQ--AAIGLA---QLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYV  271 (352)
T ss_pred             CCCCCCccccceeeeccCcCHHH--HHHHHH---HHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEE
Confidence                           11112221  122221   12344677788899999999999986 788765422     23455


Q ss_pred             eecC---CCChHHHHHHHHHhcCeEeeCCCCCCCC----------------C-------CCeEEEEc--cCCHHHHHHHH
Q 036024          214 AHFP---GRKSWDVFAEILEKTHITTVPGSGFGPG----------------G-------EEYIRISG--FGHRESILEAS  265 (272)
Q Consensus       214 i~l~---~~~~~~~~~~ll~~~gi~v~~g~~~~~~----------------~-------~~~~R~s~--~~~~~~i~~~l  265 (272)
                      +.++   +....++...|. +.||.+..  .|.+.                .       .+.+|+++  ..+++|+++++
T Consensus       272 ~~~~~~~~~~~~~v~~~L~-~~gI~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~  348 (352)
T cd00616         272 IRLDPEAGESRDELIEALK-EAGIETRV--HYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVI  348 (352)
T ss_pred             EEECCcCCCCHHHHHHHHH-HCCCCeee--ecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHH
Confidence            5665   345566666654 55997642  23221                0       26799996  46999999999


Q ss_pred             HHHH
Q 036024          266 RRLE  269 (272)
Q Consensus       266 ~~l~  269 (272)
                      ++|+
T Consensus       349 ~~l~  352 (352)
T cd00616         349 EALR  352 (352)
T ss_pred             HHhC
Confidence            8874

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.64  E-value=1.1e-14  Score=127.11  Aligned_cols=115  Identities=20%  Similarity=0.334  Sum_probs=83.2

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.++     +...+...| +++.++.+.     ++ +++  .+++++|++++|+||||.+.+   +++|+++|
T Consensus        97 d~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d-----~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la  168 (418)
T TIGR01326        97 DNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDD-----PEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVA  168 (418)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCC-----HHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHH
Confidence            55666554322     344556778 888887531     12 222  257899999999999999976   88999999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccc
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE  134 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~  134 (272)
                      +++|+++|+|++|.....   ..++ .    .+..+++.|+||.+|.+|+|+||+++++.
T Consensus       169 ~~~~i~livD~t~~~~~~---~~~l-~----~g~Divv~S~sK~l~g~G~~lGg~v~~~~  220 (418)
T TIGR01326       169 HAHGVPLIVDNTFATPYL---CRPI-D----HGADIVVHSATKYIGGHGTAIGGVIVDGG  220 (418)
T ss_pred             HHcCCEEEEECCCchhhc---CCch-h----cCCeEEEECccccccCCccceEEEEEecc
Confidence            999999999999974211   1111 1    12359999999999988999999998653

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.64  E-value=5.8e-14  Score=120.95  Aligned_cols=170  Identities=18%  Similarity=0.241  Sum_probs=110.9

Q ss_pred             cccccccCcc-cchH----Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAG-DLED----EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~-~~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+ .+..    .+...| ++..++.+....+.-.+  .+++|+|++++|+||||.+   .++++|+++|+++
T Consensus       101 D~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l--~~~TklV~lespsNPtg~v---~dl~~I~~la~~~  175 (394)
T PRK09028        101 DHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELI--RPNTKVLFLESPGSITMEV---QDVPTLSRIAHEH  175 (394)
T ss_pred             CEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhc--CcCceEEEEECCCCCCCcH---HHHHHHHHHHHHc
Confidence            5666666544 3332    345677 77766544222222112  2689999999999999877   5699999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++++|++|.....   ..++ .+..    -+++.|.+|.+ |.++...|+++.+++.        .+.+.........
T Consensus       176 g~~lvvD~t~a~p~~---~~Pl-~~Ga----Divv~S~tK~l~Gh~d~~~G~~~~~~~~--------~~~l~~~~~~~G~  239 (394)
T PRK09028        176 DIVVMLDNTWASPIN---SRPF-EMGV----DISIQAATKYIVGHSDVMLGTATANEKH--------WDQLREHSYLMGQ  239 (394)
T ss_pred             CCEEEEECCcccccc---CCcc-ccCc----eEEEEeCCeEecCCCCEEEEEEECCHHH--------HHHHHHHHHhcCC
Confidence            999999999975221   1122 2321    29999999998 5556777877665544        3444433333333


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ..++...     ++...+.+.+.-+.++..+++..+.+.|+++
T Consensus       240 ~~~p~~a-----~l~~rgl~TL~lR~~~~~~na~~la~~L~~~  277 (394)
T PRK09028        240 CTSPDDV-----YLAMRGLRTLGVRLAQHEKNALKVANWLATR  277 (394)
T ss_pred             CCCHHHH-----HHHHcccCcHHHHHHHHHHHHHHHHHHHhcC
Confidence            3343332     2322344556778899999999999999987

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.64  E-value=3.9e-14  Score=122.05  Aligned_cols=169  Identities=15%  Similarity=0.223  Sum_probs=108.3

Q ss_pred             cccccccCccc--ch---HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD--LE---DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~--~~---~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+.  |.   ..+...| +++.++......    +++  .+++|+|++++|+||||.+.+   +++|.++|+
T Consensus        89 d~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~----l~~ai~~~tklV~le~P~NPtg~~~d---l~~I~~la~  161 (377)
T PRK07671         89 DHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEE----VEEAIRPNTKAIYVETPTNPLLKITD---IKKISTIAK  161 (377)
T ss_pred             CEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHH----HHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHH
Confidence            55666665433  22   2345577 888887531111    222  268999999999999999865   889999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ++++++|+|++|......   .++ .+.    ..+++.|+||.+|.++ .-.|+++++++.+       .+.+...+...
T Consensus       162 ~~g~~lvvD~a~~~~~~~---~p~-~~g----~Divv~S~sK~l~G~~~~~~G~~v~~~~~l-------~~~~~~~~~~~  226 (377)
T PRK07671        162 EKGLLTIVDNTFMTPYWQ---SPI-SLG----ADIVLHSATKYLGGHSDVVAGLVVVNSPEL-------AEDLHFVQNST  226 (377)
T ss_pred             HcCCEEEEECCCCccccC---Chh-hhC----CeEEEecCcccccCCccceeEEEEeCcHHH-------HHHHHHHHHhh
Confidence            999999999999743222   122 221    1399999999997443 3457777655432       45555444443


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ....+......+..     +.+.+..+.++.++++..+.+.|++.
T Consensus       227 g~~~~~~~a~l~~~-----~l~tl~~R~~~~~~na~~la~~L~~~  266 (377)
T PRK07671        227 GGILGPQDSWLLLR-----GLKTLGIRMEEHETNSRAIAEFLNNH  266 (377)
T ss_pred             cCCCCHHHHHHHHc-----CcChHHHHHHHHHHHHHHHHHHHHcC
Confidence            33233332222222     23445667888889999999999986

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.63  E-value=1.4e-13  Score=118.67  Aligned_cols=168  Identities=14%  Similarity=0.194  Sum_probs=108.4

Q ss_pred             cccccccCccc--ch---HHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD--LE---DEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~--~~---~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.+.  +.   ......| +++.++..     .++ ++.  .+++++|++++|+||||.+++   +++|.++|
T Consensus        93 d~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~-----d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la  164 (388)
T PRK08861         93 DLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQS-----DAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKA  164 (388)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCC-----CHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHH
Confidence            55666554433  22   2233456 66666532     111 222  268999999999999999998   77888999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +++++++|+|++|......   .++ .+.  .|  +++.|++|.++. .+...|+++++++.+       .+.+......
T Consensus       165 ~~~gi~vIvDea~~~~~~~---~pl-~~G--aD--ivv~S~tK~l~G~~d~~gG~i~~~~~~~-------~~~~~~~~~~  229 (388)
T PRK08861        165 KAVGALVAVDNTFLTPVLQ---KPL-ELG--AD--FVIHSTTKYINGHSDVIGGVLITKTKEH-------AEELAWWGNC  229 (388)
T ss_pred             HHcCCEEEEECCccccccC---CCc-ccC--CC--EEEeecceeccCCCcceeEEEEecHHHH-------HHHHHHHHhc
Confidence            9999999999999853322   122 222  12  899999998864 456789988755432       4445444443


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      .....++.....+.     .+.+.+.-+.++..+++..+.+.|+.+
T Consensus       230 ~G~~~~p~~a~l~~-----rgl~Tl~lR~~~~~~~a~~~a~~L~~~  270 (388)
T PRK08861        230 IGATGTPFDSYMTL-----RGIRTLGARMRVHEESAQQILAYLQTQ  270 (388)
T ss_pred             cCCCCChHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            33334444333222     333455667788899999999999987

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.63  E-value=5e-14  Score=122.02  Aligned_cols=169  Identities=16%  Similarity=0.167  Sum_probs=110.0

Q ss_pred             cccccccCccc-ch----HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LE----DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~----~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+. +.    ..+...| +++.++.....    ++++  .+++|+|++++|+||+|..   .++++|+++|+
T Consensus       105 D~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~----~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~  177 (394)
T PRK07050        105 DDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGA----GIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAAR  177 (394)
T ss_pred             CEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHH----HHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHH
Confidence            66777666555 23    2456678 88877654221    2222  2689999999999999754   67999999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ++++++|+|++|......   .++ ...    ..+++.|++|.++ ..+.+.|++++.++.+       .+.+...+...
T Consensus       178 ~~gi~livD~a~a~~~~~---~~l-~~G----aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~-------~~~~~~~~~~~  242 (394)
T PRK07050        178 ARGVVTAIDNTYSAGLAF---KPF-EHG----VDISVQALTKYQSGGSDVLMGATITADAEL-------HAKLKLARMRL  242 (394)
T ss_pred             HcCCEEEEECCccccccc---CHH-HcC----CeEEEEECCceecCCCCeeEEEEEECCHHH-------HHHHHHHHHhc
Confidence            999999999999752211   111 121    2388999999996 3445689888765442       45555555443


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ..+.++.....+.+.+     +.+..+.++..+++..+.+.|+++
T Consensus       243 G~~~~~~~a~l~lr~l-----~tl~~Rl~~~~~~a~~la~~L~~~  282 (394)
T PRK07050        243 GIGVSADDCSLVLRGL-----PSLQVRLAAHDRSALEVAEWLKAR  282 (394)
T ss_pred             CCCCCHHHHHHHHcCC-----CcHHHHHHHHHHHHHHHHHHHHhC
Confidence            4334444333222222     334557777888888899999876

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.63  E-value=1.3e-13  Score=120.36  Aligned_cols=211  Identities=14%  Similarity=0.103  Sum_probs=128.9

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      .++|+|++.++.  +|...   ++.+|.++|+++|+++++|++|+...... +.....+.   ...++++|++|.++.+.
T Consensus       167 ~~~klVi~~~~~--~g~~~---dl~~l~~la~~~g~~livD~Aha~G~~~~-g~~~~~~~---~~Di~~~s~~K~l~g~~  237 (416)
T PRK13034        167 HKPKLIIAGFSA--YPREL---DFARFREIADEVGALLMVDMAHIAGLVAA-GEHPNPFP---HAHVVTTTTHKTLRGPR  237 (416)
T ss_pred             cCCeEEEECCCc--ccccc---CHHHHHHHHHHcCCEEEEeCcccccCccc-CCCCCCCC---CceEEEEeCcccCCCCC
Confidence            357888776554  35554   48888889999999999999998644432 11111111   22389999999994232


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhhcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK  202 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~  202 (272)
                        .|+++++++.+       ...++....... .+...+...++...+.........+.+++++++.++|++.|.+.|+.
T Consensus       238 --GG~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~  308 (416)
T PRK13034        238 --GGMILTNDEEI-------AKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYD  308 (416)
T ss_pred             --CeEEEECcHHH-------HHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCE
Confidence              37777766552       223332222211 11222222222222221111223466799999999999999999998


Q ss_pred             EecC-CCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCC----CCCCCCeEEEEc------cCCHHHHHHHHHHHHH
Q 036024          203 VYGG-INAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGF----GPGGEEYIRISG------FGHRESILEASRRLEA  270 (272)
Q Consensus       203 ~~~~-~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~----~~~~~~~~R~s~------~~~~~~i~~~l~~l~~  270 (272)
                      +..+ ..+..+.+.+... .....+.+.+++.||.+.+-...    .+..+..+|+++      ..+++|++++++.|++
T Consensus       309 ~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~  388 (416)
T PRK13034        309 LVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILD  388 (416)
T ss_pred             eccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHH
Confidence            8653 3567777877632 24454545566779999752111    122356799994      2358999999999987


Q ss_pred             hC
Q 036024          271 LF  272 (272)
Q Consensus       271 ~l  272 (272)
                      ++
T Consensus       389 ~~  390 (416)
T PRK13034        389 VL  390 (416)
T ss_pred             HH
Confidence            63

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.63  E-value=3.7e-14  Score=121.62  Aligned_cols=241  Identities=12%  Similarity=0.095  Sum_probs=151.1

Q ss_pred             ccCccc-chHHhcc---cceeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEc
Q 036024            9 VGQAGD-LEDEVGK---YCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD   84 (272)
Q Consensus         9 ~~~~~~-~~~~~~~---~g~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D   84 (272)
                      .+.|+. +.+.+..   .+++..++.++..  .++.+..++++++.+++.+|.||...|   +++|   ++++|+++++|
T Consensus        90 ~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~lV~~~h~et~tG~~~p---i~~I---~~~~g~~~iVD  161 (361)
T TIGR01366        90 FGEFSSKFAKAVKLAPWLGEPIIVTADPGS--APEPQADPGVDVIAWAHNETSTGVAVP---VRRP---EGSDDALVVID  161 (361)
T ss_pred             cCHHHHHHHHHHHhhhccCCceEEecCCCC--CCCCccCCCCCEEEEcccCCccceecc---cccc---cccCCCeEEEE
Confidence            344444 4444443   2366666665432  344444579999999999999999988   4444   47899999999


Q ss_pred             ccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc---------chHHHHHhhh----
Q 036024           85 SAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF---------PVINDFNRII----  151 (272)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~---------~~~~~~~~~~----  151 (272)
                      .+.+.   +..+..+...    |  +++.|..|.+|.+|- ++.++++++.+.....         ... .+....    
T Consensus       162 avqs~---g~~~idv~~~----D--~~~~s~~K~lg~~~G-l~~~~~s~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~  230 (361)
T TIGR01366       162 ATSGA---GGLPVDIAET----D--VYYFAPQKNFASDGG-LWLAIMSPAALERIEAIAASGRWVPEFL-SLPTAVDNSL  230 (361)
T ss_pred             cCccc---cCCCCCHHHC----C--EEEEEchhhcCCCCc-eEEEEECHHHHhhhhcccCCCCCCchhh-hHHHHHhccc
Confidence            99875   2223333332    2  788999999997642 5556667766432110         011 111111    


Q ss_pred             -hhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCC-CeEecC-C---CceEEEeec-CCCChHH
Q 036024          152 -CTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLG-IKVYGG-I---NAPYVWAHF-PGRKSWD  223 (272)
Q Consensus       152 -~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~---~~~~~~i~l-~~~~~~~  223 (272)
                       ..+.++++.....++.++++..... ..+.+.++.++..+++++.+.+.+ ++.... .   ......+.+ .+.+..+
T Consensus       231 ~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~~~~  310 (361)
T TIGR01366       231 KNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDIDAAT  310 (361)
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccCHHH
Confidence             1334556666554555555532222 357788999999999999999986 554431 1   111122233 3556666


Q ss_pred             HHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          224 VFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       224 ~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      +...| +++||.+.++.  ...+.+.+|+|.  +++.+|+++++++|+++
T Consensus       311 v~~~L-~~~gI~i~~~~--~~l~~~~vRis~~~~~t~~di~~l~~al~~~  357 (361)
T TIGR01366       311 VAKIL-RANGIVDTEPY--RKLGRNQLRVAMFPAIDPDDVEALTECVDWV  357 (361)
T ss_pred             HHHHH-HHCCCeeccCc--cccCCCcEEEEcCCCCCHHHHHHHHHHHHHH
Confidence            66666 45599997764  223356899995  56999999999999875

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.63  E-value=2e-14  Score=123.51  Aligned_cols=207  Identities=17%  Similarity=0.142  Sum_probs=149.2

Q ss_pred             CCceEEEEecCCCccccCCCHH-HHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQN-QLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~-~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      .++.++++-.-+...|...++. .++++.++|++||+++|+||++.++...|...........+|.+    ++||.+| .
T Consensus       221 ~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDiv----t~aK~ig-~  295 (447)
T COG0160         221 EEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV----TLAKSLG-G  295 (447)
T ss_pred             CceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEE----Eeccccc-C
Confidence            3566666666688888776555 48999999999999999999999988777555555555455643    6899999 6


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--C
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--G  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g  200 (272)
                      |+.+|.++..++.        .+ +..-....++..|+++..++.+.++....   +.+.++.++.-+++++.|.++  .
T Consensus       296 G~Pl~avv~r~ei--------~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~---e~L~~~a~~~G~~l~~~L~~l~~~  363 (447)
T COG0160         296 GLPLSAVVGRAEI--------MD-WPPGGHGGTFGGNPVACAAALAVLDVIEE---ENLLERAAELGEYLRDRLEELQEK  363 (447)
T ss_pred             CCceeEEeccHHh--------cc-cCCcccCCCCCcCHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999988        44 54445555577999999999999884333   367777777888888888765  2


Q ss_pred             CeEecC--CCceEEEeecCC------C---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHH
Q 036024          201 IKVYGG--INAPYVWAHFPG------R---KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRR  267 (272)
Q Consensus       201 ~~~~~~--~~~~~~~i~l~~------~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~  267 (272)
                      ..+.+.  .-|.++-+++..      .   .......+++++ |+.+..+..+    .+.+||.  +..++++++++++.
T Consensus       364 ~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~-Glil~~~G~~----~nviRi~PPL~is~e~~d~~l~i  438 (447)
T COG0160         364 HPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFER-GLLLLTCGPH----GNVLRILPPLTISDEELDEGLDI  438 (447)
T ss_pred             cCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHc-CCEEeccCCC----CcEEEEeCCcccCHHHHHHHHHH
Confidence            223332  136677777641      1   123455556555 9888654433    4689999  56699999999999


Q ss_pred             HHHhC
Q 036024          268 LEALF  272 (272)
Q Consensus       268 l~~~l  272 (272)
                      |.++|
T Consensus       439 l~~al  443 (447)
T COG0160         439 LEEAL  443 (447)
T ss_pred             HHHHH
Confidence            98764

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.63  E-value=1.3e-13  Score=119.19  Aligned_cols=170  Identities=14%  Similarity=0.124  Sum_probs=104.2

Q ss_pred             cccccccCccc-chHHh---cccc-eeEEeecCCCCCcccCCCCCC-CceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEV---GKYC-NIEYLECGPGNNFFPDLKGTS-RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~---~~~g-~~~~~~~~~~~~~~~dl~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. ....+   ...| +++.+..+.+ .+.-.+  .+ ++|+|++.+|+||||.+++   +++|+++|+++
T Consensus        93 D~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~d~~-~l~~~i--~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~  166 (385)
T PRK08574         93 DRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYPSTE-DIIEAI--KEGRTKLVFIETMTNPTLKVID---VPEVAKAAKEL  166 (385)
T ss_pred             CEEEEcCCCchhHHHHHHHhhccCcEEEEECCCHH-HHHHhc--CccCceEEEEECCCCCCCEecC---HHHHHHHHHHc
Confidence            55666655444 33332   4456 6666543321 111111  14 7899999999999999988   78999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccc-eeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVR-LGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++|+|++|......   .++ ...    ..+++.|++|.++.+|-. .|++++.++.+       .+.+.........
T Consensus       167 gi~livD~t~a~~~~~---~~l-~~G----aDivv~S~sK~l~g~~d~~gG~vi~~~~~~-------~~~~~~~~~~~g~  231 (385)
T PRK08574        167 GAILVVDNTFATPLLY---RPL-RHG----ADFVVHSLTKYIAGHNDVVGGVAVAWSGEF-------LEELWEWRRRLGT  231 (385)
T ss_pred             CCEEEEECCCCccccC---Chh-hhC----CcEEEeeCceeecCCCCceeEEEEECcHHH-------HHHHHHHHHhcCC
Confidence            9999999999642211   122 221    238999999999756654 47666644332       4444444443333


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ..++.....+.+-     .+.+..+.++..+++..+.+.|+++
T Consensus       232 ~~~p~~a~l~l~~-----l~tL~~R~~~~~~na~~la~~L~~~  269 (385)
T PRK08574        232 IMQPFEAYLVLRG-----LKTLEVRFERQCRNAMAIAEFLSEH  269 (385)
T ss_pred             CCCHHHHHHHHcc-----cCcHHHHHHHHHHHHHHHHHHHHcC
Confidence            3333322222222     2334566777788999999999876

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.63  E-value=4.3e-14  Score=122.56  Aligned_cols=204  Identities=15%  Similarity=0.089  Sum_probs=135.1

Q ss_pred             CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.++++...++..|... +++.+++|.++|++||+++|+||++.++...|...........+|    +.+++|.+| .
T Consensus       178 ~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PD----i~t~gK~lg-~  252 (395)
T PRK03715        178 DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD----IMTLGKGIG-G  252 (395)
T ss_pred             CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCc----eeeehhhhh-C
Confidence            4566666666677777765 688899999999999999999999997544443222222222344    347899998 7


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      |..+|.++++++..         .+.......+++.++++..++.+.++....   +...++.+++.+++++.|+++   
T Consensus       253 G~p~~av~~~~~i~---------~~~~~~~~~T~~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~  320 (395)
T PRK03715        253 GVPLAALLAKAEVA---------VFEAGDQGGTYNGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEE  320 (395)
T ss_pred             CcceEEEEEccccc---------cccCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhc
Confidence            88999998888772         111111233434677777777777763222   456778888888888888764   


Q ss_pred             -CCeEecCCCceEEEeecCCCChHHHHHHHHHhc---CeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          200 -GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKT---HITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       200 -g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~---gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                       ++.-.. ..|.++.+.+..... ..+.+.+.+.   ||.+.+..      .+.+|++.  ..|++|+++++++|++++
T Consensus       321 ~~i~~vr-G~Glm~~i~l~~~~~-~~~~~~~~~~~~~Gi~~~~~~------~~~lR~~p~l~~t~~ei~~~~~~l~~~l  391 (395)
T PRK03715        321 RGLEGER-GEGLLRALLLGKDIG-PQIVEKARDMQPDGLLLNAPR------PNLLRFMPALNVTTEEIDQMIAMLRSVL  391 (395)
T ss_pred             CCcCeEE-cceeEEEEEecCchH-HHHHHHHHhccCCCEEEeecC------CCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence             443233 247777788764212 2233333444   99986432      35799995  569999999999998764

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.62  E-value=7.4e-14  Score=120.33  Aligned_cols=243  Identities=16%  Similarity=0.171  Sum_probs=138.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++.++.+. ....+...| +++.++++++ ++.+|++.     .+++|+|+   |+||+|...+   +++|.++|++
T Consensus        72 d~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~-~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~  144 (376)
T TIGR02379        72 DEVIMPSYTFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANK  144 (376)
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHH
Confidence            66777776655 556667788 9999999876 57777433     26788876   5678899876   8899999999


Q ss_pred             cCCEEEEcccCCccc-cCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           77 NGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +|+++|+|++|+.+. +.+.  .+..+.   +  +...||  +|.+. +|.+.|+++++++.+       .+.+..++..
T Consensus       145 ~~i~vIeDaa~~~g~~~~~~--~~g~~~---~--~~~fSf~~~K~l~-~g~~gG~v~~~~~~~-------~~~~~~~~~~  209 (376)
T TIGR02379       145 HQLFVIEDAAQGVMSTYKGR--ALGSIG---H--LGTFSFHETKNYT-SGGEGGALLINDQAF-------IERAEIIREK  209 (376)
T ss_pred             CCCEEEEECccccCCccCCc--ccCCCC---C--EEEEeCCCCCcCc-ccCCceEEEECCHHH-------HHHHHHHHHh
Confidence            999999999998654 3332  222221   1  223333  38885 777889988876542       3344333321


Q ss_pred             cc-----------------CCcchHH--HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---C-CeEec-CCC-
Q 036024          154 CF-----------------NGASNIA--QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---G-IKVYG-GIN-  208 (272)
Q Consensus       154 ~~-----------------~~~~~~~--~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g-~~~~~-~~~-  208 (272)
                      ..                 .+.+.-.  ..|+....+   ...+++..++-++..+...+.|+++   + +.... +.+ 
T Consensus       210 g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~q---L~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~  286 (376)
T TIGR02379       210 GTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQ---LEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGC  286 (376)
T ss_pred             CCCCccccccCCCcceeeeecccCCccHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCC
Confidence            10                 0111111  111111111   1333444455555555566666553   2 22221 111 


Q ss_pred             --c-eEEEeecCC-CChHHHHHHHHHhcCeEeeCCC----CCC------C-CC---------CCeEEEEcc--CCHHHHH
Q 036024          209 --A-PYVWAHFPG-RKSWDVFAEILEKTHITTVPGS----GFG------P-GG---------EEYIRISGF--GHRESIL  262 (272)
Q Consensus       209 --~-~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~----~~~------~-~~---------~~~~R~s~~--~~~~~i~  262 (272)
                        . .+.++.++. .+..++...| +++||...+..    ...      . .+         ...+.+.+.  .+++|++
T Consensus       287 ~~~~~~~~i~~~~~~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~  365 (376)
T TIGR02379       287 QHNAHMFYIKLKDEDDRNELIKYL-KEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQA  365 (376)
T ss_pred             eeeeEEEEEEECCcCCHHHHHHHH-HHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHH
Confidence              1 234566653 2345555555 55599876322    110      0 00         234555543  3899999


Q ss_pred             HHHHHHHHhC
Q 036024          263 EASRRLEALF  272 (272)
Q Consensus       263 ~~l~~l~~~l  272 (272)
                      +.++.|++++
T Consensus       366 ~i~~~i~~~~  375 (376)
T TIGR02379       366 RVIQTICDYL  375 (376)
T ss_pred             HHHHHHHHHh
Confidence            9999998753

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.61  E-value=8.1e-14  Score=121.80  Aligned_cols=178  Identities=21%  Similarity=0.250  Sum_probs=109.3

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+.     +...++..| +++.++......+.-.+  .+++++|++++|+||||.+++   +++|+++|+++
T Consensus       104 D~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai--~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~  178 (431)
T PRK08248        104 DEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAI--TDKTKALFAETIGNPKGDVLD---IEAVAAIAHEH  178 (431)
T ss_pred             CEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhc--CCCCeEEEEECCCCCCCcccC---HHHHHHHHHHc
Confidence            55666654322     334566788 98888874211121112  257899999999999999988   78999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc-c-c---------cCC------
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-L-F---------SSG------  140 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~-~---------~~~------  140 (272)
                      ++++|+|++|... ..  ..++ .+    +..+++.|++|.+|.+|.++|.+++.+.. . .         +.-      
T Consensus       179 gi~vIvD~t~a~~-~~--~~pl-~~----gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (431)
T PRK08248        179 GIPLIVDNTFASP-YL--LRPI-EH----GADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGL  250 (431)
T ss_pred             CCEEEEeCCCCcc-cc--CChh-Hc----CCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccc
Confidence            9999999998631 11  1222 22    22388999999999899999997774321 0 0         000      


Q ss_pred             ---cch------HHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          141 ---FPV------INDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       141 ---~~~------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                         ..+      ...............++..     +++...+.+.+..+.++.++++..+.+.|+++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~-----a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~  313 (431)
T PRK08248        251 VYTDAVGEAAYITKARVQLLRDLGAALSPFN-----SFLLLQGLETLHLRMERHSENALAVAKFLEEH  313 (431)
T ss_pred             hhhhhhchhhHHHHHHHHHHHhcCCCCCHHH-----HHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhC
Confidence               000      0000011111112122221     22222344556778888999999999999987

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.60  E-value=1.5e-13  Score=120.25  Aligned_cols=207  Identities=14%  Similarity=0.120  Sum_probs=136.4

Q ss_pred             CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      .++.++++-..+...|... +++.++++.++|++||+++|+||++.++...+...........+|.  +  +++|.+| .
T Consensus       223 ~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDi--v--t~gK~lg-~  297 (442)
T TIGR03372       223 DDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDI--L--CLAKALG-G  297 (442)
T ss_pred             CcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCe--e--eehhhhc-C
Confidence            3455566555566667755 5777999999999999999999999875444432222233334452  2  4899998 7


Q ss_pred             c-cceeEEEecccccccCCcchHHHHH--hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFN--RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      | +.+|.++++++.        .+.+.  .....++++.++++..|+.+.++....   +...++.+++-+++++.|+++
T Consensus       298 G~~Pigavv~~~~i--------~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~l  366 (442)
T TIGR03372       298 GVMPIGATIATEAV--------FSVLFDNPFLHTTTFGGNPLACAAALATINELLE---KNLPAQAAIKGDFLLDGFQQL  366 (442)
T ss_pred             CcccceEEEecHHH--------HHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence            8 689999988776        33332  223345555788888888888873322   234556666677777777654


Q ss_pred             ----C-C-eEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHH
Q 036024          200 ----G-I-KVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEA  270 (272)
Q Consensus       200 ----g-~-~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~  270 (272)
                          + . .-.. ..|.++.+.+... ....+...++++ ||.+.+..   + +.+.+|+..  ..|++|+++++++|++
T Consensus       367 ~~~~~~~i~~vR-G~Gl~~giel~~~~~~~~i~~~l~~~-Gvl~~~~~---~-~~~~lr~~Ppl~~t~~~id~~~~~l~~  440 (442)
T TIGR03372       367 AAEYPDLIIEAR-GKGLLMAIEFRDNEIGYAFAKELFQQ-NILVAGTL---N-NAKSIRIEPPLTITIEQCALVIKAAKD  440 (442)
T ss_pred             HHhCCCceEEEe-cceEEEEEEeCChHHHHHHHHHHHHC-CcEEeecC---C-CCCEEEEECCcccCHHHHHHHHHHHHH
Confidence                2 1 1122 2577888888632 234556666655 99996432   1 136789884  5699999999999998


Q ss_pred             hC
Q 036024          271 LF  272 (272)
Q Consensus       271 ~l  272 (272)
                      +|
T Consensus       441 ~~  442 (442)
T TIGR03372       441 AL  442 (442)
T ss_pred             hC
Confidence            75

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.60  E-value=1.3e-13  Score=121.19  Aligned_cols=204  Identities=18%  Similarity=0.109  Sum_probs=132.7

Q ss_pred             CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.+|++-..+...|... +++.+++|.++|++||+++|+||++.++...+.......+...+|  ++  ++||.+| .
T Consensus       220 ~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pD--iv--t~~K~l~-~  294 (441)
T PRK05769        220 EEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPD--II--TLAKAIA-G  294 (441)
T ss_pred             CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCC--EE--EEccccc-C
Confidence            3455555544466667754 567799999999999999999999997654443322233332344  22  5899998 8


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG--  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--  200 (272)
                      |+++|+++++++..        ... ......+++.+++++.++.+.++.. .+   ...++.+++.++|++.|+++.  
T Consensus       295 G~p~gav~~~~~i~--------~~~-~~~~~~T~~g~p~~~aaa~a~L~~l-~~---~~~~~~~~~g~~l~~~L~~l~~~  361 (441)
T PRK05769        295 GLPLGAVIGRAELM--------FLP-PGSHANTFGGNPVAAAAALATLEEL-EE---GLLENAQKLGEYLRKELKELKEK  361 (441)
T ss_pred             CcccEEEEEehhhh--------hcC-CCCCCCCCCcCHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHh
Confidence            89999999988773        111 1122334456788888888887622 11   566778888888888887642  


Q ss_pred             CeEe--cCCCceEEEeecCCC-------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024          201 IKVY--GGINAPYVWAHFPGR-------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE  269 (272)
Q Consensus       201 ~~~~--~~~~~~~~~i~l~~~-------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~  269 (272)
                      ..+.  ....|.++.+.+...       ....+...++++ ||.+.+.      +...+||+.  ..|++|+++++++++
T Consensus       362 ~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-Gil~~~~------~~~~lr~~p~l~~t~~~id~~~~~l~  434 (441)
T PRK05769        362 YEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKR-GLLLLGA------GKSAIRIIPPLIITEEEADIGLEILE  434 (441)
T ss_pred             CCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhC-CcEEecC------CCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence            2221  112466666666321       122344455554 9998653      246789984  459999999999998


Q ss_pred             HhC
Q 036024          270 ALF  272 (272)
Q Consensus       270 ~~l  272 (272)
                      +++
T Consensus       435 ~~l  437 (441)
T PRK05769        435 EAI  437 (441)
T ss_pred             HHH
Confidence            764

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.60  E-value=2e-13  Score=117.92  Aligned_cols=243  Identities=18%  Similarity=0.134  Sum_probs=142.6

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+++. +...+...| +++.++++++ ++.+|++.     .+++|+|+++|   ++|...+   +++|.++|++
T Consensus        72 d~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~-~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~---~~~i~~la~~  144 (375)
T PRK11706         72 DEVIMPSYTFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIEAAITPKTRAIVPVH---YAGVACE---MDTIMALAKK  144 (375)
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcCCCCeEEEEeC---CCCCccC---HHHHHHHHHH
Confidence            56777776666 667777888 9999999876 56666433     26789988764   6898755   8899999999


Q ss_pred             cCCEEEEcccCCccc-cCCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           77 NGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +|+++|+|++|+.+. +.+  .++..+.   +  +-+.||+  |.++ +|.+.++++.++++        .+++...+..
T Consensus       145 ~~i~vIeD~a~a~g~~~~~--~~~g~~~---~--~~~~Sf~~~K~l~-~g~gG~~~~~~~~~--------~~~~~~~~~~  208 (375)
T PRK11706        145 HNLFVVEDAAQGVMSTYKG--RALGTIG---H--IGCFSFHETKNYT-AGEGGALLINDPAL--------IERAEIIREK  208 (375)
T ss_pred             cCCEEEEECccccccccCC--eeeecCc---C--EEEEeCCCCcccc-ccCCeEEEECCHHH--------HHHHHHHHHc
Confidence            999999999998755 232  2222221   1  3444554  9997 68777777666665        3333222211


Q ss_pred             -----------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC----CeEec-CCC---
Q 036024          154 -----------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG----IKVYG-GIN---  208 (272)
Q Consensus       154 -----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~-~~~---  208 (272)
                                       ...+.+........++.. ...+.+++..++-+++.+.+.+.|+.+.    +.+.. +.+   
T Consensus       209 g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~-~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~  287 (375)
T PRK11706        209 GTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLW-AQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKH  287 (375)
T ss_pred             CCCcchhhccCCCcceeeecccccCcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCce
Confidence                             001122222221222221 1123346666667777778888887652    33221 211   


Q ss_pred             -ceEEEeecCC-CChHHHHHHHHHhcCeEeeCCC----CC------CC--C--------CCCeEEEEcc--CCHHHHHHH
Q 036024          209 -APYVWAHFPG-RKSWDVFAEILEKTHITTVPGS----GF------GP--G--------GEEYIRISGF--GHRESILEA  264 (272)
Q Consensus       209 -~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~----~~------~~--~--------~~~~~R~s~~--~~~~~i~~~  264 (272)
                       ..+.++.++. ....++...|. ++||.+....    ..      +.  .        ....+-+.+.  .+++|++..
T Consensus       288 ~~~~~~~~~~~~~~r~~l~~~L~-~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i  366 (375)
T PRK11706        288 NAHMFYIKLRDLEDRSALINFLK-EAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTV  366 (375)
T ss_pred             eeEEEEEEECCcCCHHHHHHHHH-HCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHH
Confidence             2356677763 34455555554 5599875321    00      00  0        0233444443  378999999


Q ss_pred             HHHHHHh
Q 036024          265 SRRLEAL  271 (272)
Q Consensus       265 l~~l~~~  271 (272)
                      ++.|+++
T Consensus       367 ~~~i~~~  373 (375)
T PRK11706        367 IDTILEF  373 (375)
T ss_pred             HHHHHHH
Confidence            9998875

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.60  E-value=1.8e-13  Score=117.79  Aligned_cols=168  Identities=18%  Similarity=0.233  Sum_probs=108.2

Q ss_pred             cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++.++.+. ...    .+...| ++..++...+    .++++  .+++|+|++++|+||+|..   .++++|+++|+
T Consensus        90 D~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~----e~l~~~i~~~tklV~lesp~Np~g~~---~dl~~I~~la~  162 (377)
T TIGR01324        90 DHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIG----EDIATLIQPNTKVLFLEAPSSITFEI---QDIPAIAKAAR  162 (377)
T ss_pred             CEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCH----HHHHHhcCCCceEEEEECCCCCCCcH---HHHHHHHHHHH
Confidence            55665554443 222    235567 7666654322    12332  2689999999999999877   56999999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ++|+++|+|++|......   .++ .+    +.-++++|++|.+| .++...|+++++++.        .+.+.......
T Consensus       163 ~~g~~livD~t~a~g~~~---~pl-~~----gaDivv~S~tK~l~G~~d~~gG~v~~~~~~--------~~~l~~~~~~~  226 (377)
T TIGR01324       163 NPGIVIMIDNTWAAGLLF---KPL-EH----GVDISIQAGTKYLVGHSDIMIGTVVANART--------WDQLREHSYLM  226 (377)
T ss_pred             HcCCEEEEECCCcccccc---Ccc-cc----CceEEEecCceeccCCCCceEEEEEeCHHH--------HHHHHHHHHHh
Confidence            999999999999853221   111 22    22389999999996 345678988887765        34443333333


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ....++....   .++  .+.+.+..+.++.++++..+.+.|+++
T Consensus       227 G~~l~p~~a~---~~~--rgl~tl~~R~~~~~~~a~~la~~L~~~  266 (377)
T TIGR01324       227 GQMVDADDAY---TTL--RGLRTLGVRLKQHQESSLAIAKWLSEQ  266 (377)
T ss_pred             CCCCCHHHHH---HHH--hhhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence            3223332222   222  333556677888899999999999986

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK05939 hypothetical protein; Provisional

Probab=99.59  E-value=9.7e-14  Score=120.23  Aligned_cols=178  Identities=17%  Similarity=0.134  Sum_probs=108.5

Q ss_pred             cccccccCccc----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            4 DSSVIVGQAGD----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         4 d~~~~~~~~~~----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      |.|++..+.+.    +...+...| +++.++......+..-+  .+++|+|++++|+||||.+   .++++|+++|+++|
T Consensus        87 d~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~d~e~l~~~l--~~~tklV~vesp~NptG~v---~dl~~I~~la~~~g  161 (397)
T PRK05939         87 DHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDATDVQNVAAAI--RPNTRMVFVETIANPGTQV---ADLAGIGALCRERG  161 (397)
T ss_pred             CEEEECCCccccHHHHHHHHHhcCCEEEEECCCCHHHHHHhC--CCCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcC
Confidence            55666655332    223456778 88888764221222112  2689999999999999988   46999999999999


Q ss_pred             CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccc--------cCC------cchH
Q 036024           79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF--------SSG------FPVI  144 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~--------~~~------~~~~  144 (272)
                      +++|+|++|....    ......+    +..+++.|+||.++..|.++|++++.+....        ...      ....
T Consensus       162 i~livD~t~a~~~----~~~~~~~----gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (397)
T PRK05939        162 LLYVVDNTMTSPW----LFRPKDV----GASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGL  233 (397)
T ss_pred             CEEEEECCccccc----ccCcccc----CCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHH
Confidence            9999999986311    0111111    2349999999999878999999887543210        000      0000


Q ss_pred             HHHHhh-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          145 NDFNRI-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       145 ~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ..+... ........++  ..   +++...+.+.+..+.++..+++..+.+.|+.+
T Consensus       234 ~~~~~~~~~~~G~~~~p--~~---a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~  284 (397)
T PRK05939        234 TQIRKKGLRDMGATLSS--EA---AHRIAIGAETLALRVDRSCSNALALAQFLEAH  284 (397)
T ss_pred             HHHHHHHHHhcCCCCCH--HH---HHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhC
Confidence            011111 1111111222  22   22222344555667777788999999999987

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.59  E-value=3.5e-13  Score=118.96  Aligned_cols=232  Identities=15%  Similarity=0.081  Sum_probs=139.5

Q ss_pred             EeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCcc
Q 036024           27 YLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIY  100 (272)
Q Consensus        27 ~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~  100 (272)
                      ++..+.+ +..+|+++      ..++++|++. .++ +|+..+   +++|.++|+++|+++++|++|.....+....+ .
T Consensus       160 ~y~~~~~-~g~iD~d~Le~~l~~~~pklIv~~-~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~-~  232 (475)
T PLN03226        160 PYRLDES-TGLIDYDKLEKKAMLFRPKLIIAG-ASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAA-S  232 (475)
T ss_pred             eeeecCC-CCCcCHHHHHHHHhhcCCeEEEEe-cCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCC-C
Confidence            4445544 44456333      1467766553 332 566665   77899999999999999999985444332211 0


Q ss_pred             ccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCc------chHHHHHhhhh-hccCCcchHHHHHHHHhccc
Q 036024          101 EIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGF------PVINDFNRIIC-TCFNGASNIAQAGGLACLSS  172 (272)
Q Consensus       101 ~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~  172 (272)
                      ... .  .-++++|++|++ |..|   |++.++++.......      .+...+..... ....+++.....++...+..
T Consensus       233 p~~-~--~Div~~t~hK~L~GP~G---g~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~  306 (475)
T PLN03226        233 PFE-Y--CDVVTTTTHKSLRGPRG---GMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQ  306 (475)
T ss_pred             CCC-C--CeEEEecCcccccCCCc---eEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHH
Confidence            011 1  128899999999 5445   888887654211000      01111111111 12223344444444444543


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC-CceEEEeecC--CCChHHHHHHHHHhcCeEeeCCCCCC---CCC
Q 036024          173 EGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-NAPYVWAHFP--GRKSWDVFAEILEKTHITTVPGSGFG---PGG  246 (272)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~i~l~--~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~  246 (272)
                      ......++.++++.++.++|.+.|.+.|+++..+. ....+++.+.  +.+. ......|++.||.+..+.-++   +-.
T Consensus       307 i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~-~~~~~~L~~~~I~~nk~~~p~~~~~~~  385 (475)
T PLN03226        307 AMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTG-SRVEKVLDLAHITLNKNAVPGDSSALV  385 (475)
T ss_pred             HhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCH-HHHHHHHHHCCCEECCCCCCCCcccCC
Confidence            22233467789999999999999999999987642 3567778874  3344 445566777899998765322   223


Q ss_pred             CCeEEEEc------cCCHHHHHHHHHHHHHhC
Q 036024          247 EEYIRISG------FGHRESILEASRRLEALF  272 (272)
Q Consensus       247 ~~~~R~s~------~~~~~~i~~~l~~l~~~l  272 (272)
                      ++.+|++.      ..+++|++++.+.|.++|
T Consensus       386 ~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~  417 (475)
T PLN03226        386 PGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAV  417 (475)
T ss_pred             CCCcccCcHHHHHCCCCHHHHHHHHHHHHHHH
Confidence            56789862      236888998888887653

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.59  E-value=2.8e-13  Score=117.72  Aligned_cols=240  Identities=15%  Similarity=0.128  Sum_probs=147.2

Q ss_pred             chHHhcccc-eeEEeec-CCCCCcccCCCCC-----C---CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEc
Q 036024           15 LEDEVGKYC-NIEYLEC-GPGNNFFPDLKGT-----S---RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD   84 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~-~~~~~~~~dl~~~-----~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D   84 (272)
                      ....+...| +++.++. ..++.+.+|++.+     +   ++.++++++|+  |+.....+++++|.++|++||+++++|
T Consensus       164 ~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvD  241 (444)
T TIGR03531       164 CIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVN  241 (444)
T ss_pred             HHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEE
Confidence            445667778 8898885 2334687775442     2   55666666665  444445578999999999999999999


Q ss_pred             ccCCccccCCCCCCc--cccCCCCCceEEEecCccccCCCccceeEEE-ecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024           85 SAYAAYVTDGCPRSI--YEIPGAREVAIEISSFSKFSGFTGVRLGWTV-VPEELLFSSGFPVINDFNRIICTCFNGASNI  161 (272)
Q Consensus        85 ~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (272)
                      ++|+.....  ...+  .... ...-.+++.|++|.+..||.  |+++ .+++.+       .+.+......  ...+.+
T Consensus       242 aAyg~~~~~--~~~~~~~g~~-~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el-------~~~i~~~y~g--~~~~s~  307 (444)
T TIGR03531       242 NAYGLQSNK--YMELINKAIK-VGRVDAVVSSTDKNFMVPVG--GAIIYSFDENF-------IQEISKSYPG--RASASP  307 (444)
T ss_pred             CcCcCcChh--hhhhhhcccc-ccCCCeEEEeCccCCCCCCC--EEEEEECCHHH-------HHHHHHhccC--CCCChH
Confidence            999852211  0111  1111 00113678899999987765  5544 534332       3344332211  224456


Q ss_pred             HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCC-ceEEEeecC---CCChHHHHHHHHHhcC
Q 036024          162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----GIKVYGGIN-APYVWAHFP---GRKSWDVFAEILEKTH  233 (272)
Q Consensus       162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~-~~~~~i~l~---~~~~~~~~~~ll~~~g  233 (272)
                      .+.+...++. .+.+.++++.++..++++++.+.|+++    |.++..... ..-+.+.+.   +.+..++...|..+ +
T Consensus       308 ~~~~~~~ll~-~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~-~  385 (444)
T TIGR03531       308 SLDVLITLLS-LGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSR-R  385 (444)
T ss_pred             HHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhC-C
Confidence            6776666665 566788999999999999999999875    667664322 233444444   44566666666555 5


Q ss_pred             eE----eeCCC-------C---CCCCC----CCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          234 IT----TVPGS-------G---FGPGG----EEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       234 i~----v~~g~-------~---~~~~~----~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                      |.    |.||.       .   |+...    ..++-++  +..+++|++.++++|++.+
T Consensus       386 v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~  444 (444)
T TIGR03531       386 VTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL  444 (444)
T ss_pred             CCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence            52    33554       2   22211    1233333  3558999999999999864

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PRK07678 aminotransferase; Validated

Probab=99.58  E-value=1.9e-13  Score=120.39  Aligned_cols=212  Identities=14%  Similarity=0.097  Sum_probs=135.3

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.++++-..+.-.|.+ .+++.++++.++|++||+++|.||++.+|...+...........+|.+    +++|.+| .
T Consensus       212 ~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDiv----t~gK~lg-g  286 (451)
T PRK07678        212 ETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDII----TMAKGIT-S  286 (451)
T ss_pred             CceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEE----Eeecccc-c
Confidence            455666665445555666 466779999999999999999999998775544332233333345532    6799998 6


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHh------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNR------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT  195 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  195 (272)
                      | +.+|.++++++.        .+.+..      +...++++.++++..++.+.++....   +...++.+++.++|++.
T Consensus       287 G~~Pi~av~~~~~i--------~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~  355 (451)
T PRK07678        287 AYLPLSATAVKKEI--------YEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMEN---ENLIERSAQLGELLLEQ  355 (451)
T ss_pred             CCcceeEEEEcHHH--------HHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHH
Confidence            7 689999999887        343331      23455666888888888888873322   23455666666666666


Q ss_pred             HHh----CCCeEecCCCceEEEeecCCC-------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHH
Q 036024          196 LAS----LGIKVYGGINAPYVWAHFPGR-------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRE  259 (272)
Q Consensus       196 L~~----~g~~~~~~~~~~~~~i~l~~~-------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~  259 (272)
                      |++    .++...-...|.++.+.+...       +   ...+...++++ ||.+.+....-+.+...+|++.  ..|++
T Consensus       356 l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~-Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~  434 (451)
T PRK07678        356 LKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEK-GLIIGKNGDTVAGYNNVLTLSPPLVISSE  434 (451)
T ss_pred             HHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHC-CcEEeecCccccCCCCEEEEECCCcCCHH
Confidence            644    232211112455666666310       1   12345555555 9999753211123346799984  55999


Q ss_pred             HHHHHHHHHHHhC
Q 036024          260 SILEASRRLEALF  272 (272)
Q Consensus       260 ~i~~~l~~l~~~l  272 (272)
                      |+++++++++++|
T Consensus       435 eid~~~~~l~~~l  447 (451)
T PRK07678        435 EIAFIVGTLKTAL  447 (451)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998764

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.58  E-value=2.1e-13  Score=120.11  Aligned_cols=206  Identities=14%  Similarity=0.146  Sum_probs=137.2

Q ss_pred             CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.++++-..+...|... |++.++++.++|++||+++|+||++.++...|...........+|  ++  +++|.+| .|
T Consensus       231 ~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PD--iv--t~gK~lg-gG  305 (459)
T PRK11522        231 DVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPD--IL--CLAKALG-GG  305 (459)
T ss_pred             cEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCC--EE--Eechhhh-CC
Confidence            445555555566677754 566799999999999999999999986543343222222333344  22  7899998 77


Q ss_pred             -cceeEEEecccccccCCcchHHHHH--hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 036024          124 -VRLGWTVVPEELLFSSGFPVINDFN--RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-  199 (272)
Q Consensus       124 -~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-  199 (272)
                       +.+|.+++.++.        .+.+.  .....++++.++++..++.+.++....   +...++.+++.++|++.|+++ 
T Consensus       306 ~~Pigav~~~~~i--------~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~  374 (459)
T PRK11522        306 VMPIGATIATEEV--------FSVLFDNPFLHTTTFGGNPLACAAALATINVLLE---QNLPAQAEQKGDYLLDGFRQLA  374 (459)
T ss_pred             CccceeEEEcHHH--------HHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHH
Confidence             689999998877        33332  223445555688888888888873332   345677888888888888765 


Q ss_pred             -CCe-E---ecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          200 -GIK-V---YGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       200 -g~~-~---~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                       ... +   .. ..|.++.+.+.... ...+...+++ +||.+.+..    .+...+|+..  ..+++|+++++++|+++
T Consensus       375 ~~~~~~i~~Vr-G~Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~----~~~~~lr~~Ppl~~t~~~id~~l~~l~~~  448 (459)
T PRK11522        375 REYPDLVQEAR-GKGMLMAIEFVDNEIGYNFASEMFR-QRVLVAGTL----NNAKTIRIEPPLTLTIEQCEQVLKAARKA  448 (459)
T ss_pred             HhCCCceeeEE-eceeEEEEEecCchHHHHHHHHHHH-CCeEEEecC----CCCCEEEEECCccCCHHHHHHHHHHHHHH
Confidence             221 1   22 24777778876422 3345555555 499997532    1246899884  56999999999999876


Q ss_pred             C
Q 036024          272 F  272 (272)
Q Consensus       272 l  272 (272)
                      +
T Consensus       449 l  449 (459)
T PRK11522        449 L  449 (459)
T ss_pred             H
Confidence            4

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.58  E-value=3.6e-13  Score=115.42  Aligned_cols=151  Identities=18%  Similarity=0.192  Sum_probs=99.0

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      +++|+|++++|+||||.+.+   +++|+++|+++|+++|+|++|.....   ..++ ....  |  +++.|++|.++..|
T Consensus       135 ~~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~---~~pl-~~ga--D--ivv~S~tK~l~g~~  203 (364)
T PRK07269        135 EDTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIY---QRPI-ELGA--D--IVLHSATKYLSGHN  203 (364)
T ss_pred             cCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc---CCch-hhCC--c--EEEecCceeccCCC
Confidence            68999999999999998875   99999999999999999999754221   1222 2221  2  89999999997333


Q ss_pred             -cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 036024          124 -VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GI  201 (272)
Q Consensus       124 -~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~  201 (272)
                       .-.|+++++++.+       .+.+...+.......++.....+...+     +.+..+.++.++++..+.+.|+.+ .+
T Consensus       204 d~~gG~v~~~~~~l-------~~~~~~~~~~~G~~~s~~~a~l~~~~L-----~tL~~r~~~~~~na~~~a~~L~~~p~v  271 (364)
T PRK07269        204 DVLAGVVVTNDLEL-------YEKLFYNLNTTGAVLSPFDSYLLMRGL-----KTLSLRMERSTANAQEVVAFLKKSPAV  271 (364)
T ss_pred             cccceEEEeCcHHH-------HHHHHHHHHHhCCCCCHHHHHHHHcCC-----CcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence             2358878765442       344443332222334444333333333     345778888899999999999987 33


Q ss_pred             -eEecCCCceEEEeecC
Q 036024          202 -KVYGGINAPYVWAHFP  217 (272)
Q Consensus       202 -~~~~~~~~~~~~i~l~  217 (272)
                       .+..|..|..+.+.+.
T Consensus       272 ~~v~ypg~gg~~sf~~~  288 (364)
T PRK07269        272 KEVLYTGKGGMISFKVA  288 (364)
T ss_pred             cEEeCCCcCcEEEEEEC
Confidence             4543334445555554

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.58  E-value=2.1e-13  Score=119.24  Aligned_cols=205  Identities=12%  Similarity=0.054  Sum_probs=135.8

Q ss_pred             CCceEEEEecC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCSP-NNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++.++++-.. +...|.. .+++.+++|.++|++||+++|+||++.++...|...........+|  ++  +++|.++ 
T Consensus       205 ~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD--iv--~~gK~l~-  279 (429)
T PRK06173        205 DEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPD--IM--CIGKALT-  279 (429)
T ss_pred             CcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCC--EE--Eeehhhh-
Confidence            45666666542 6777776 6788899999999999999999999977543333222223333344  33  3899997 


Q ss_pred             Cc-cceeEEEecccccccCCcchHHHHHh-----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024          122 TG-VRLGWTVVPEELLFSSGFPVINDFNR-----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT  195 (272)
Q Consensus       122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  195 (272)
                      .| ..++.++.+++.        .+.+..     +...++++.++++..++.+.++....   +...++.+++.++|++.
T Consensus       280 gG~~p~~a~~~~~~i--------~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~---~~~~~~~~~~g~~l~~~  348 (429)
T PRK06173        280 GGYLTLSATITTEAI--------AQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLE---SPWQQNIQRIEAQLKQE  348 (429)
T ss_pred             CCccccceEEecHHH--------HHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHH
Confidence            77 468888888776        333321     22333444677888877777763222   23467788888888888


Q ss_pred             HHhC-CCeEecC--CCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHH
Q 036024          196 LASL-GIKVYGG--INAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLE  269 (272)
Q Consensus       196 L~~~-g~~~~~~--~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~  269 (272)
                      |+++ +......  ..|.++.+.+... ....+...++++ ||.+.+..       +.+||.  +..+++|+++++++|+
T Consensus       349 L~~~~~~~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e~-Gi~v~~~g-------~~l~~~Ppl~it~~ei~~~~~~l~  420 (429)
T PRK06173        349 LAPAAEFDSVAEVRVLGAIGVVEMKEPVNMATLQPRFVEH-GIWVRPFG-------KLVYIMPPFIISPDELSQLTSGLL  420 (429)
T ss_pred             HHHhhcCCCeeeeeccceEEEEEeCCcccHHHHHHHHHHC-CeEEEecC-------CEEEEeCCccCCHHHHHHHHHHHH
Confidence            8764 3332221  2477777888643 334555555554 99997531       478998  5679999999999998


Q ss_pred             HhC
Q 036024          270 ALF  272 (272)
Q Consensus       270 ~~l  272 (272)
                      ++|
T Consensus       421 ~~l  423 (429)
T PRK06173        421 RVL  423 (429)
T ss_pred             HHH
Confidence            864

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.58  E-value=1.8e-14  Score=120.38  Aligned_cols=178  Identities=14%  Similarity=0.023  Sum_probs=105.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCc----ccCCCC-------CCCceEEEEecCCCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNF----FPDLKG-------TSRTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~----~~dl~~-------~~~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      |.|++..+... ....+...| ++++++.+.+.++    .+|++.       .++++++++++| ||||.+++   +++|
T Consensus       100 d~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I  175 (294)
T cd00615         100 DKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKI  175 (294)
T ss_pred             CEEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHH
Confidence            45555544333 444556677 8888887655432    344222       257899999998 69999987   8899


Q ss_pred             HHHHHHcCCEEEEcccCCcc-ccCCCCCCccccCCCCCceEEEecCccccCCCccceeEE-EecccccccCCcchHHHHH
Q 036024           71 VEFARNNGSIIIFDSAYAAY-VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWT-VVPEELLFSSGFPVINDFN  148 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~-~~~~~~~~~~~~~~~~~~~  148 (272)
                      +++|+++|+++++|++|+.. .+.+. .+....  ..+..+++.|++|++  +|++.|++ ..+.+...      ...+.
T Consensus       176 ~~~~~~~g~~livDeA~~~~~~~~~~-~~~~~~--~~~~div~~S~hK~l--~g~~~~~~l~~~~~~~~------~~~~~  244 (294)
T cd00615         176 VEEAHHRGLPVLVDEAHGAHFRFHPI-LPSSAA--MAGADIVVQSTHKTL--PALTQGSMIHVKGDLVN------PDRVN  244 (294)
T ss_pred             HHHHHhcCCeEEEECcchhhhccCcc-cCcchh--hcCCcEEEEchhccc--chHhHHHHHHhCCCcCC------HHHHH
Confidence            99999999999999999742 23221 111111  123459999999986  56665554 44444211      22333


Q ss_pred             hhhhhc-cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024          149 RIICTC-FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA  197 (272)
Q Consensus       149 ~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~  197 (272)
                      ...... +.+++.....++..++. ....+.++..++..++.+.+++.+.
T Consensus       245 ~~~~~~~ttsps~~~~asl~~a~~-~~~~~g~~~~~~~~~~~~~~r~~l~  293 (294)
T cd00615         245 EALNLHQSTSPSYLILASLDVARA-MMALEGKELVEELIELALYARQEIN  293 (294)
T ss_pred             HHHHHHCCCCcHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHHh
Confidence            222222 22233333333333332 2223335567778888888888775

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.58  E-value=2.5e-13  Score=117.17  Aligned_cols=171  Identities=15%  Similarity=0.181  Sum_probs=104.9

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+.     +...+...| +++.++......+.-.+  .+++++|++.+|+||||.+.+   +++|+++|+++
T Consensus        89 d~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai--~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~  163 (380)
T PRK06176         89 DHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAI--KPNTKALYLETPSNPLLKITD---LAQCASVAKDH  163 (380)
T ss_pred             CEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhc--CcCceEEEEECCCCCCceecC---HHHHHHHHHHc
Confidence            55666655332     234456677 77777653111111111  268999999999999999977   88999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      ++++|+|++|......   .++ .+..  |  +++.|++|.++.++ .-.|+++++++.+       .+.+...+.....
T Consensus       164 gi~vivD~t~a~~~~~---~p~-~~ga--D--ivv~S~tK~l~g~~d~~gG~vv~~~~~~-------~~~~~~~~~~~G~  228 (380)
T PRK06176        164 GLLTIVDNTFATPYYQ---NPL-LLGA--D--IVVHSGTKYLGGHSDVVAGLVTTNNEAL-------AQEIAFFQNAIGG  228 (380)
T ss_pred             CCEEEEECCccccccC---Ccc-ccCC--C--EEEecCceeccCCccceeeEEEecHHHH-------HHHHHHHHHHhcC
Confidence            9999999999853322   122 2221  2  89999999997554 3457777655432       3444433333222


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ..++....     +...+.+.+..+.++.+++...+.+.|+..
T Consensus       229 ~~~~~~~~-----l~~~gl~tl~~R~~~~~~~a~~la~~L~~~  266 (380)
T PRK06176        229 VLGPQDSW-----LLQRGIKTLGLRMEAHQKNALCVAEFLEKH  266 (380)
T ss_pred             CCCHHHHH-----HHHhccCcHHHHHHHHHHHHHHHHHHHHhC
Confidence            22322222     111222344556677778888888888876

>PLN02509 cystathionine beta-lyase

Probab=99.57  E-value=3e-13  Score=118.63  Aligned_cols=169  Identities=18%  Similarity=0.265  Sum_probs=105.9

Q ss_pred             cccccccCccc-ch----HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LE----DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~----~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+. +.    ..+...| +++.++...   . .++++  .+++|+|++++|+||||.+   .++++|+++|+
T Consensus       172 D~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d---~-e~l~~ai~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk  244 (464)
T PLN02509        172 EEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTN---L-DEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKIAEMAH  244 (464)
T ss_pred             CEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCC---H-HHHHHhCCcCCeEEEEECCCCCCCCH---HHHHHHHHHHH
Confidence            55666555444 33    2234567 777775431   1 11222  3688999999999999987   66999999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ++|+++|+|++|......   .++ ....    .+++.|++|.++.+| .-.|+++++++.+       ...+.......
T Consensus       245 ~~g~~lIVD~A~a~~~~~---~pl-~~ga----Divv~S~tK~l~G~gdv~gG~v~~~~~~l-------~~~~~~~~~~~  309 (464)
T PLN02509        245 AQGALVLVDNSIMSPVLS---RPL-ELGA----DIVMHSATKFIAGHSDVMAGVLAVKGEKL-------AKEVYFLQNSE  309 (464)
T ss_pred             HcCCEEEEECCccccccC---Chh-hcCC----cEEEecCcccccCCCccceeEEEeccHHH-------HHHHHHHHHhc
Confidence            999999999998643221   122 1211    289999999887433 3357777655542       23322222222


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ....++..     +++...+.+.+..+.++.+++++.+.+.|+++
T Consensus       310 g~~l~p~~-----A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~  349 (464)
T PLN02509        310 GSGLAPFD-----CWLCLRGIKTMALRIEKQQENARKIAMYLSSH  349 (464)
T ss_pred             CCCcCHHH-----HHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcC
Confidence            22223222     22222334566778899999999999999986

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.56  E-value=1.1e-12  Score=112.93  Aligned_cols=205  Identities=15%  Similarity=0.137  Sum_probs=125.9

Q ss_pred             cccccccCccc-ch----HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LE----DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~----~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. +.    ..++..| ++..++.+....+.-.+  .+++|+|++++|+||++.+   .++++|+++|+++
T Consensus       104 D~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al--~~~TklV~lesPsNP~l~v---~dl~~I~~la~~~  178 (395)
T PRK05967        104 DHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLM--RPNTKVVHTEAPGSNTFEM---QDIPAIAEAAHRH  178 (395)
T ss_pred             CEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhc--CcCceEEEEECCCCCCCcH---HHHHHHHHHHHHh
Confidence            55666655444 33    3457788 88887654221121112  2679999999999998655   7799999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++|+|++|....+    ..+..+..  |  +++.|.+|.++ .++...|+++.+++.        .+.+.........
T Consensus       179 g~~vvVD~t~a~p~~----~~pl~~Ga--D--ivv~S~tKy~~Gh~d~~~G~v~~~~~~--------~~~l~~~~~~~G~  242 (395)
T PRK05967        179 GAIVMMDNTWATPLY----FRPLDFGV--D--ISIHAATKYPSGHSDILLGTVSANEKC--------WPQLLEAHGTLGL  242 (395)
T ss_pred             CCEEEEECCccCcee----cChhHcCC--C--EEEEecccccCCCCCeeEEEEEcCHHH--------HHHHHHHHHHcCC
Confidence            999999999975221    12223322  2  99999999874 456777877766543        3333322222222


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eEecC----------------CCceEEEeecCC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GI-KVYGG----------------INAPYVWAHFPG  218 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~----------------~~~~~~~i~l~~  218 (272)
                      ..++..     +++...+.+.+.-+.++..+++..+.+.|+++ .+ ++..|                ..|..+.+.+++
T Consensus       243 ~~~p~d-----a~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~  317 (395)
T PRK05967        243 CAGPDD-----TYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAA  317 (395)
T ss_pred             CCCHHH-----HHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence            233332     22332444566778888899999999999986 33 22222                124567788863


Q ss_pred             C--ChHHHHHHHHHhcCe
Q 036024          219 R--KSWDVFAEILEKTHI  234 (272)
Q Consensus       219 ~--~~~~~~~~ll~~~gi  234 (272)
                      .  ++.+...++++.-.+
T Consensus       318 ~~~~~~~~~~~f~~~l~l  335 (395)
T PRK05967        318 GPEKGKAKAHAFLDALEI  335 (395)
T ss_pred             CCcccHHHHHHHHHhCCc
Confidence            2  134445555555443

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.55  E-value=2e-13  Score=108.79  Aligned_cols=228  Identities=16%  Similarity=0.134  Sum_probs=148.0

Q ss_pred             cccceeEEeecCCCCCcccCCCC-------------CCCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcc
Q 036024           20 GKYCNIEYLECGPGNNFFPDLKG-------------TSRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDS   85 (272)
Q Consensus        20 ~~~g~~~~~~~~~~~~~~~dl~~-------------~~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~   85 (272)
                      +.++.+.+.++.++++...|++.             .|.+++|.+-|-+|-+| .++|.+.+.++.++|+++++.+..|.
T Consensus       116 s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DG  195 (384)
T KOG1368|consen  116 SQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDG  195 (384)
T ss_pred             hhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecch
Confidence            34455566666666565555333             26789999987755555 99999999999999999999999999


Q ss_pred             cCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHH
Q 036024           86 AYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAG  165 (272)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  165 (272)
                      +.-+-..-....++..+....|. +.+ .+||.+|+|   +|-+++.+..+       ++....++.....+.-..+..|
T Consensus       196 ARi~NAavasgV~vk~i~~~fDS-Vsi-CLSKglgAP---VGSViVG~k~F-------I~kA~~~RKalGGGmRQsGvLa  263 (384)
T KOG1368|consen  196 ARIFNAAVASGVPVKKICSAFDS-VSI-CLSKGLGAP---VGSVIVGSKDF-------IDKARHFRKALGGGMRQSGVLA  263 (384)
T ss_pred             hhhhhHHHHcCCCHHHHHHhhhh-hhh-hhhccCCCC---cccEEEccHHH-------HHHHHHHHHHhcCchhHHHHHH
Confidence            98764433345566655433332 222 589999866   57655544443       4444444443333344444444


Q ss_pred             HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecC-CCceEEEeecC--CCChHHHHHHHHHhcCeEeeCCCC
Q 036024          166 GLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGG-INAPYVWAHFP--GRKSWDVFAEILEKTHITTVPGSG  241 (272)
Q Consensus       166 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~~i~l~--~~~~~~~~~~ll~~~gi~v~~g~~  241 (272)
                      ++++......   -...++-.+++..+.+.++..+ +.+.-+ -.++++.+.+.  ..+.++++..+ +++||.+.++. 
T Consensus       264 aaaLval~~~---~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~-~k~gi~lm~~~-  338 (384)
T KOG1368|consen  264 AAALVALDEN---VPLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFL-EKNGILLMGGA-  338 (384)
T ss_pred             HHHHHHhhcc---hHHHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHH-HHCCeEEeecc-
Confidence            4444431111   2244556667777777777764 777655 46778777774  45667777766 55599998876 


Q ss_pred             CCCCCCCeEEEEcc--CCHHHHHHHHHHHH
Q 036024          242 FGPGGEEYIRISGF--GHRESILEASRRLE  269 (272)
Q Consensus       242 ~~~~~~~~~R~s~~--~~~~~i~~~l~~l~  269 (272)
                           +..+|+.+.  .++++++..+..+.
T Consensus       339 -----s~r~Rivlh~Qvt~~~ve~~~~~~~  363 (384)
T KOG1368|consen  339 -----SRRIRIVLHHQVTDEDVEYVKSVLS  363 (384)
T ss_pred             -----ccceEEEEEEecCHHHHHHHHHHHH
Confidence                 446898874  48999998888884

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.54  E-value=5.8e-13  Score=116.35  Aligned_cols=203  Identities=13%  Similarity=0.035  Sum_probs=132.2

Q ss_pred             CceEEEEec-CCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           45 RTDIIFFCS-PNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        45 ~~~~i~~~~-p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++.+|++-. .+.-.|.. .+++.+++|.++|++|++++|+||++.++...|...........+|  ++  +++|.+| .
T Consensus       204 ~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PD--i~--t~gK~l~-g  278 (428)
T PRK07986        204 EIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPD--IL--CLGKALT-G  278 (428)
T ss_pred             cEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCC--EE--Eechhhh-C
Confidence            444555544 25555654 4668899999999999999999999977643343222222333344  22  5899997 7


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHh-----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNR-----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL  196 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L  196 (272)
                      | +.+|.++++++.        .+.+..     +....+++.++++..++.+.++....   +...++.+++.+++++.|
T Consensus       279 G~~p~~av~~~~~i--------~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~---~~~~~~~~~~g~~l~~~l  347 (428)
T PRK07986        279 GTMTLSATLTTREV--------AETISNGEAGCFMHGPTFMGNPLACAVANASLSLLES---GDWQQQVAAIEAQLREEL  347 (428)
T ss_pred             CcccCcchhchHHH--------HHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHH
Confidence            7 588888888877        444432     12334455778888888777763222   235677777777888877


Q ss_pred             HhC-CCeE---ecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHH
Q 036024          197 ASL-GIKV---YGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLE  269 (272)
Q Consensus       197 ~~~-g~~~---~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~  269 (272)
                      +++ ....   .. ..|.+..+.+... ....+...+++ +|+.+.+..       +.+|+.  +..+++|+++++++|.
T Consensus       348 ~~l~~~~~i~~vR-g~Gl~~~ve~~~~~~~~~~~~~l~~-~Gl~~~~~g-------~~i~~~Ppl~it~~ei~~~~~~l~  418 (428)
T PRK07986        348 APLRDAPMVADVR-VLGAIGVVETTRPVNMAALQRFFVE-QGVWIRPFG-------KLIYLMPPYIILPEQLQRLTAAVN  418 (428)
T ss_pred             HHHhcCCCEEeEe-ccceEEEEEeCCcccHHHHHHHHHH-CCcEEEecC-------CEEEEeCCCCCCHHHHHHHHHHHH
Confidence            764 2111   11 1366777777532 23445555554 599997631       478997  6679999999999998


Q ss_pred             HhC
Q 036024          270 ALF  272 (272)
Q Consensus       270 ~~l  272 (272)
                      ++|
T Consensus       419 ~~l  421 (428)
T PRK07986        419 RAV  421 (428)
T ss_pred             HHH
Confidence            764

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.54  E-value=7.7e-13  Score=117.67  Aligned_cols=204  Identities=11%  Similarity=0.027  Sum_probs=132.7

Q ss_pred             CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.+|++-..+...|.+. +++.+++|.++|++||+++|+||++.++..-+...........+|    +.+++|.+| .|
T Consensus       260 ~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PD----ivtlgK~lg-gG  334 (504)
T PLN02760        260 TIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPD----LVSLAKALS-SA  334 (504)
T ss_pred             ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCc----EEEeccccc-CC
Confidence            444555544466667654 677799999999999999999999977644443322222333344    357899998 66


Q ss_pred             -cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024          124 -VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT  195 (272)
Q Consensus       124 -~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  195 (272)
                       +.+|.++++++.        .+.+..       .....+++.++++..++.+.++....   +...++.+++.++|++.
T Consensus       335 ~~PigAv~~~~~i--------~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~---~~l~~~~~~~g~~l~~~  403 (504)
T PLN02760        335 YMPIGAVLVSPEI--------SDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKE---RNIPEHVNKIAPRFQDG  403 (504)
T ss_pred             ccccceEeecHHH--------HhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHH
Confidence             489999998877        333322       22345556788888888888873322   34567777777777777


Q ss_pred             HHhC---CCeEecCCCceEEEeecCC-CC-----------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCH
Q 036024          196 LASL---GIKVYGGINAPYVWAHFPG-RK-----------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHR  258 (272)
Q Consensus       196 L~~~---g~~~~~~~~~~~~~i~l~~-~~-----------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~  258 (272)
                      |+++   ++...--..|.++-+.+.. ..           ...+...++++ ||.+.+..       ..+|++  +..++
T Consensus       404 L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~g-------~~lrl~Ppl~it~  475 (504)
T PLN02760        404 IKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKR-GMLVRVAG-------DNIMMSPPLIITP  475 (504)
T ss_pred             HHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhC-CcEEEecC-------CEEEEECCCCCCH
Confidence            7664   2211111235666666632 11           22344555555 99986521       468999  45799


Q ss_pred             HHHHHHHHHHHHhC
Q 036024          259 ESILEASRRLEALF  272 (272)
Q Consensus       259 ~~i~~~l~~l~~~l  272 (272)
                      +|+++++++|+++|
T Consensus       476 eeid~~~~~l~~al  489 (504)
T PLN02760        476 EEVDELISIYGKAL  489 (504)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998764

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.54  E-value=1.3e-13  Score=115.52  Aligned_cols=208  Identities=20%  Similarity=0.210  Sum_probs=146.1

Q ss_pred             EEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC--CCceEEEecCccccCCCcc
Q 036024           48 IIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA--REVAIEISSFSKFSGFTGV  124 (272)
Q Consensus        48 ~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~g~  124 (272)
                      ++++. .--..-|.+.   ++.++++++++++++++.||+|+....+..+.....+.+.  .+..|.+++|.|++|..| 
T Consensus       278 i~iivegiysmEg~iv---~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G-  353 (519)
T KOG1357|consen  278 ILICVEGIYSMEGTIV---DLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG-  353 (519)
T ss_pred             eeeeeccceeccCeec---ccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc-
Confidence            44444 4444666664   4899999999999999999999987776666666666433  355699999999999888 


Q ss_pred             ceeEEEecccccccCCcchHHHHHhhh---hhccCCcchHHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHHHHh
Q 036024          125 RLGWTVVPEELLFSSGFPVINDFNRII---CTCFNGASNIAQAGGLACLS---SEGLEAVHSVVDYYKENTKILIDTLAS  198 (272)
Q Consensus       125 r~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~~~l~~~L~~  198 (272)
                        |++.++++.        ++.++...   ......+++++|+....+-.   .++....++..+++++++++++..|..
T Consensus       354 --Gyiagsk~l--------id~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~  423 (519)
T KOG1357|consen  354 --GYIAGSKEL--------IDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQK  423 (519)
T ss_pred             --ceecCcHHH--------HhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhc
Confidence              999999888        33332221   12233356666665544443   233466788889999999999999999


Q ss_pred             CCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEc--cCCHHHHHHHHHHHHH
Q 036024          199 LGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISG--FGHRESILEASRRLEA  270 (272)
Q Consensus       199 ~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~--~~~~~~i~~~l~~l~~  270 (272)
                      .|+.+++..+++.+-+.+- ......+..+++++ +|.++-..... |.-.+..|++.  ..++|+++++++.+.+
T Consensus       424 ~gfivyG~~dSpVvplll~~~~k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~  498 (519)
T KOG1357|consen  424 MGFIVYGNNDSPVVPLLLYGPAKIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDR  498 (519)
T ss_pred             CcEEEecCCCCCcceeeecCcccccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhh
Confidence            9999999888876544442 22444666677777 66665444333 44466778886  4489999999998765

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.53  E-value=5.3e-13  Score=109.72  Aligned_cols=230  Identities=16%  Similarity=0.084  Sum_probs=144.1

Q ss_pred             cccceeEEeecCCCCCcccCCCC-----------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024           20 GKYCNIEYLECGPGNNFFPDLKG-----------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA   88 (272)
Q Consensus        20 ~~~g~~~~~~~~~~~~~~~dl~~-----------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~   88 (272)
                      +..+...+++..+..+..+++++           ..++.++++.+.+|.-|.++|++++++|.++|+++++.+..|.+..
T Consensus        94 ~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~  173 (342)
T COG2008          94 EFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARL  173 (342)
T ss_pred             HHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHH
Confidence            33445566666664455555332           2345555555666688999999999999999999999999999986


Q ss_pred             ccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHH--HHH
Q 036024           89 AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ--AGG  166 (272)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~a~  166 (272)
                      +...-...+++.++...-|  ++..++||..++|+   |.++..+..+       ++++..++.......+....  ...
T Consensus       174 ~nA~valg~~~~~~~~~~D--~v~~~~tK~g~~~~---gAiv~gn~~~-------~~~a~~~rK~~Ggl~~k~r~laA~~  241 (342)
T COG2008         174 ANALVALGVALKTIKSYVD--SVSFCLTKGGGAPV---GAIVFGNRDF-------AKRARRWRKRAGGLMRKARFLAAQG  241 (342)
T ss_pred             HHHHHHcCCCHHHHHhhCC--EEEEecccCCccee---eeEEEcCHHH-------HHHHHHHHHHhcccHhhhhHHHHHH
Confidence            5333222355556543333  45557899998776   7766655443       44554444333222222222  223


Q ss_pred             HHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCC
Q 036024          167 LACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGP  244 (272)
Q Consensus       167 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~  244 (272)
                      ...|++..+   ...-++-.++++.|.+.+... |+++..|..++.+++.++... ........+...|+.+.+++    
T Consensus       242 ~~~l~~~~~---~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~i~~l~~~~~~~~~~~~~~~~~----  314 (342)
T COG2008         242 LYALEDDVW---RLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESAIEALRLAGALFYRGVLIGAHG----  314 (342)
T ss_pred             HHHHhccHH---HHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHHHHHHHhhchhheeeeeccCCC----
Confidence            344443333   233345556689999999954 999998888999999998421 11122222333355553322    


Q ss_pred             CCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          245 GGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       245 ~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                         ..+||..  ..+++++++++..++.+
T Consensus       315 ---~~vRfvts~a~~~edv~~~~~~~~~~  340 (342)
T COG2008         315 ---EIVRFVTSWATSEEDVDELVAAIKAL  340 (342)
T ss_pred             ---ceEEEEeeccCCHHHHHHHHHHHHHh
Confidence               3688774  56899999999999875

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.53  E-value=1.2e-12  Score=114.94  Aligned_cols=204  Identities=17%  Similarity=0.160  Sum_probs=130.8

Q ss_pred             CceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.+|++-..+...|.. .+++.+++|.++|++||+++|+||++.++...|...........+|  +  -+++|.+| .|
T Consensus       215 ~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD--i--vt~gK~l~-gG  289 (442)
T PRK13360        215 TIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPD--L--LTCAKGLT-NG  289 (442)
T ss_pred             cEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCc--e--eeeeeccc-cC
Confidence            44455554446666776 4677799999999999999999999976644443322222222344  2  27899997 66


Q ss_pred             -cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024          124 -VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT  195 (272)
Q Consensus       124 -~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  195 (272)
                       +.+|.++++++..        +.+..       ....++++.++++..++.+.++....   +...++.+++.+++++.
T Consensus       290 ~~P~gav~~~~~i~--------~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~  358 (442)
T PRK13360        290 AIPMGAVFVSSEIH--------DAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER---EGLLTRAARLAPYWEDA  358 (442)
T ss_pred             ccceEEEEEcHHHH--------HHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHH
Confidence             6899988888773        32221       12334555788888888887763222   24667778888888888


Q ss_pred             HHhCC-CeEecC--CCceEEEeecCC------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHH
Q 036024          196 LASLG-IKVYGG--INAPYVWAHFPG------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEA  264 (272)
Q Consensus       196 L~~~g-~~~~~~--~~~~~~~i~l~~------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~  264 (272)
                      |+++. ......  ..|.+.-+.+..      ....++...++++ ||.+.++       .+.+||+  +..|++|++++
T Consensus       359 l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~-Gvl~~~~-------~~~lr~~Ppl~~t~~eid~~  430 (442)
T PRK13360        359 LHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEK-GLMIRYT-------GDILALSPPLIIEEAQIDEL  430 (442)
T ss_pred             HHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHC-CcEEEec-------CCEEEEeCCCccCHHHHHHH
Confidence            87652 211111  124444444421      1123556666655 9999653       2469999  56799999999


Q ss_pred             HHHHHHhC
Q 036024          265 SRRLEALF  272 (272)
Q Consensus       265 l~~l~~~l  272 (272)
                      +++|++++
T Consensus       431 ~~~l~~~l  438 (442)
T PRK13360        431 FDILAQAL  438 (442)
T ss_pred             HHHHHHHH
Confidence            99998764

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.53  E-value=9.1e-13  Score=115.13  Aligned_cols=78  Identities=31%  Similarity=0.425  Sum_probs=63.0

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      +++++|++++|+||||.+++   +++|.++|+++++++|+|++|......   .++ ...  .  .+++.|++|.+|.+|
T Consensus       142 ~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~---~p~-~~g--a--Divv~S~tK~l~G~g  210 (425)
T PRK06084        142 ERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC---RPF-EHG--A--DIVVHSLTKYIGGHG  210 (425)
T ss_pred             cCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC---Chh-hcC--C--CEEEECchhcccccc
Confidence            67899999999999999988   899999999999999999999742211   122 221  1  299999999998788


Q ss_pred             cceeEEEec
Q 036024          124 VRLGWTVVP  132 (272)
Q Consensus       124 ~r~G~~~~~  132 (272)
                      .++|.+++.
T Consensus       211 ~~~gG~v~~  219 (425)
T PRK06084        211 TSIGGIVVD  219 (425)
T ss_pred             cceeEEEEe
Confidence            898887775

>PRK05965 hypothetical protein; Provisional

Probab=99.53  E-value=1.3e-12  Score=115.37  Aligned_cols=205  Identities=11%  Similarity=0.057  Sum_probs=135.5

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.++++-..+...|.. .+++.+++|.++|++||+++|.||+..++...+...........+|.+    +++|.+| .
T Consensus       214 ~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv----~~gKgl~-g  288 (459)
T PRK05965        214 DNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLM----TVAKGLT-S  288 (459)
T ss_pred             CceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeE----Eechhhc-c
Confidence            456666666556666764 566779999999999999999999999875554333333333345533    4799998 8


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID  194 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  194 (272)
                      | +.+|.++++++.        .+.+..       .....+++.++++..|+.+.++....   +...++.+++.+++.+
T Consensus       289 G~~Pi~av~~~~~i--------~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~---~~l~~~~~~~g~~l~~  357 (459)
T PRK05965        289 GYVPMGAVLMSDHV--------YQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHE---GGLLANGQKAGPRFAA  357 (459)
T ss_pred             CCcceeEEEEcHHH--------HHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence            8 499999999888        333321       23445666888888888888763322   3455666777777777


Q ss_pred             HHHhC---CC-eEecCCCceEEEeecCC-C------C-----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccC
Q 036024          195 TLASL---GI-KVYGGINAPYVWAHFPG-R------K-----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFG  256 (272)
Q Consensus       195 ~L~~~---g~-~~~~~~~~~~~~i~l~~-~------~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~  256 (272)
                      .|+++   +. .-.. ..|.++-+++.. .      +     ...+...+++ .|+.+.+.      +.+.+|+.  +..
T Consensus       358 ~l~~l~~~~~v~~vr-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gll~~~~------g~~~i~~~PpL~i  429 (459)
T PRK05965        358 GLDALRAHPLVGDVR-GRGLLGALELVADKATKTPFDAALDPADRIFDRAYA-NGLVFRAF------GDGVLGFAPALCC  429 (459)
T ss_pred             HHHhhccCCCEEEEe-ecceEEEEEEeccccccCCCCchhHHHHHHHHHHHh-CCeEEEec------CCcEEEEECCCcC
Confidence            77664   21 1112 246666666631 1      0     1234444444 59999642      24678888  566


Q ss_pred             CHHHHHHHHHHHHHhC
Q 036024          257 HRESILEASRRLEALF  272 (272)
Q Consensus       257 ~~~~i~~~l~~l~~~l  272 (272)
                      +++|+++++++|.++|
T Consensus       430 t~~ei~~~~~~l~~~l  445 (459)
T PRK05965        430 TEGEFDLIFERTRKTL  445 (459)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            9999999999998764

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.52  E-value=1.1e-12  Score=114.63  Aligned_cols=204  Identities=12%  Similarity=0.055  Sum_probs=133.9

Q ss_pred             CCceEEEEec-CCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCS-PNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~-p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++.++++-- .+...|.. .+++.+++|.++|++|++++|+||++.++...+...........+|.  +  +++|.++ 
T Consensus       199 ~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi--~--t~gK~l~-  273 (422)
T PRK05630        199 ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDI--M--CVGKALT-  273 (422)
T ss_pred             hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCe--e--eeechhh-
Confidence            3556666654 26677775 45678999999999999999999999876433332222223334442  2  7899996 


Q ss_pred             Cc-cceeEEEecccccccCCcchHHHHHh------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024          122 TG-VRLGWTVVPEELLFSSGFPVINDFNR------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID  194 (272)
Q Consensus       122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  194 (272)
                      .| ..+|+++++++.        .+.+..      +....+++.++++..++.+.++....   +...++.+++.++|++
T Consensus       274 gG~~p~~av~~~~~i--------~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~---~~~~~~~~~~g~~l~~  342 (422)
T PRK05630        274 GGFMSFAATLCTDKV--------AQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET---GMWRKQVKRIEAELIA  342 (422)
T ss_pred             cCccccceeeccHHH--------HHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh---CcHHHHHHHHHHHHHH
Confidence            67 478999998887        343321      12344556788888888887763322   2345577777777777


Q ss_pred             HHHhCC----CeEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHH
Q 036024          195 TLASLG----IKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRR  267 (272)
Q Consensus       195 ~L~~~g----~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~  267 (272)
                      .|+.+.    +.-.. ..|.++-+++... ....+...+++ +|+.+.+.      + +.+||.  +..+++|+++++++
T Consensus       343 ~L~~l~~~~~v~~vR-g~Gl~~~ie~~~~~~~~~~~~~~~~-~Gl~~~~~------g-~~l~~~PpL~it~~~i~~~~~~  413 (422)
T PRK05630        343 GLSPLAHLPGVADVR-VLGAIGVVEMEQPVDMEEATQAAVD-HGVWLRPF------G-RLVYVMPPYITTSEQIAQICAA  413 (422)
T ss_pred             HHHHhhcCCCeeeee-ccccEEEEEECCcccHHHHHHHHHH-CCeEEEec------C-CEEEEECCccCCHHHHHHHHHH
Confidence            776541    11111 2477777888632 23455555555 49999652      1 578888  46799999999999


Q ss_pred             HHHhC
Q 036024          268 LEALF  272 (272)
Q Consensus       268 l~~~l  272 (272)
                      |+++|
T Consensus       414 l~~al  418 (422)
T PRK05630        414 LAAAV  418 (422)
T ss_pred             HHHHH
Confidence            98875

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.52  E-value=9.4e-13  Score=116.14  Aligned_cols=205  Identities=12%  Similarity=0.062  Sum_probs=131.5

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      +++.+|++-..++..+...+++.+++|.++|++||+++|.||++.++...|.......+...+|.  +  +++|.+| .|
T Consensus       228 ~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDi--v--~~gKgl~-gG  302 (459)
T PRK06082        228 GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDI--L--CIGKGLG-GG  302 (459)
T ss_pred             CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCE--E--Eeccccc-CC
Confidence            34555555444655555778888999999999999999999999976444432222233334452  2  3899998 77


Q ss_pred             -cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          124 -VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       124 -~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                       ..+|.++++++..        ..+......++++.++++..++.+.++....   +...++.+++.++|++.|+++   
T Consensus       303 ~~P~~av~~~~~i~--------~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~  371 (459)
T PRK06082        303 LVPIAAMITKDKYN--------TAAQISLGHYTHEKSPLGCAAALATIEVIEQ---EGLLEKVKADSQFMRERLLEMKAK  371 (459)
T ss_pred             CCcceEEEEcHHHH--------hhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhh
Confidence             4899999887762        1111111114555788888888887763222   345667777777777777664   


Q ss_pred             -CCe-EecCCCceEEEeecCCC------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHH
Q 036024          200 -GIK-VYGGINAPYVWAHFPGR------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASR  266 (272)
Q Consensus       200 -g~~-~~~~~~~~~~~i~l~~~------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~  266 (272)
                       ++. -.. ..|.++.+++...      .   ...+...++++ |+.+.+..      .+.+|++  +..+++|++++++
T Consensus       372 ~~~i~~vr-G~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~------~~~i~~~Ppl~it~~eid~~~~  443 (459)
T PRK06082        372 YPLIGDVR-GIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNN-GLSFKVSQ------GNVIQLSPPLIITREELTQALA  443 (459)
T ss_pred             CCCeeeee-eccceeEEEEccCccccCccHHHHHHHHHHHHhC-CCEEEecC------CCEEEEeCCCccCHHHHHHHHH
Confidence             321 122 2466666776411      1   12344555554 99987531      3679998  4569999999999


Q ss_pred             HHHHhC
Q 036024          267 RLEALF  272 (272)
Q Consensus       267 ~l~~~l  272 (272)
                      ++++++
T Consensus       444 ~l~~~l  449 (459)
T PRK06082        444 ILEEAI  449 (459)
T ss_pred             HHHHHH
Confidence            998764

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.52  E-value=1.4e-12  Score=114.89  Aligned_cols=207  Identities=12%  Similarity=0.054  Sum_probs=131.5

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      .++.++++--.+...|.. .+++.+++|.++|++|++++|+||++.++...+.......+...+|  +++  ++|.+| .
T Consensus       221 ~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD--iv~--~gK~l~-g  295 (457)
T PRK05639        221 DEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPD--LII--FGKGVA-S  295 (457)
T ss_pred             CceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCC--EEE--echhhc-C
Confidence            456666665446666774 4677899999999999999999999987544443222222333444  222  899998 7


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      |..+|+++++++..        + +.......+.+.++++..|+.+.++....   +...++.+++.++|++.|+++   
T Consensus       296 G~pi~av~~~~~i~--------~-~~~~~~~~T~~g~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~  363 (457)
T PRK05639        296 GMGLSGVIGRKELM--------D-LTSGSALLTPAANPVISAAAEATLEIIEE---ENLLKNALKVGEFIKKRLLEMKES  363 (457)
T ss_pred             CCcceeEEehHHHH--------h-hcCCCcccCCCcCHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHHh
Confidence            88899999988873        2 11111223445777777777777763222   344566666777777777663   


Q ss_pred             -CCeEecCCCceEEEeecCC-C---C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHH
Q 036024          200 -GIKVYGGINAPYVWAHFPG-R---K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLE  269 (272)
Q Consensus       200 -g~~~~~~~~~~~~~i~l~~-~---~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~  269 (272)
                       ++...-...|.++.+.+.. .   +   ...+...++++ |+.+.+..    ...+.+||.  +..|++|+++++++|+
T Consensus       364 ~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~g----~~~~~lr~~Ppl~it~~~id~~~~~l~  438 (457)
T PRK05639        364 FEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFEL-GLILPSYG----MFGNVIRITPPLVITKEIAEKGLEIME  438 (457)
T ss_pred             CCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhC-CeEEeecC----CCCCEEEEeCCCccCHHHHHHHHHHHH
Confidence             3221111245666666531 0   1   22345555555 99996531    124689999  4569999999999998


Q ss_pred             HhC
Q 036024          270 ALF  272 (272)
Q Consensus       270 ~~l  272 (272)
                      +++
T Consensus       439 ~~l  441 (457)
T PRK05639        439 RAI  441 (457)
T ss_pred             HHH
Confidence            764

>PLN02271 serine hydroxymethyltransferase

Probab=99.52  E-value=3.6e-12  Score=111.87  Aligned_cols=235  Identities=15%  Similarity=0.123  Sum_probs=146.8

Q ss_pred             eeEEeecCCCCCcccC---CCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC-C
Q 036024           24 NIEYLECGPGNNFFPD---LKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC-P   96 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~d---l~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~   96 (272)
                      +.++++++++ ...+|   +++   .+++|+|++....||  ..++   .+++.++|+++|+++++|.+|........ .
T Consensus       272 ~~vpY~~d~~-~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~  345 (586)
T PLN02271        272 ESLPYKVNPQ-TGYIDYDKLEEKALDFRPKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKEC  345 (586)
T ss_pred             EEEEcccccc-cCccCHHHHHHHhhhcCCeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcC
Confidence            4556667644 33344   333   478999999887888  4455   88889999999999999999974333322 2


Q ss_pred             CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccC------------CcchHHHHHhhhhhccC-CcchHHH
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS------------GFPVINDFNRIICTCFN-GASNIAQ  163 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~~~~~~  163 (272)
                      .+....   .|  ++.+|.+|++  .|-|.|.+..+++.....            ...+.+.+.....+... ++.....
T Consensus       346 ~sP~~~---aD--vvt~TTHKtL--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~I  418 (586)
T PLN02271        346 VNPFDY---CD--IVTSTTHKSL--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHI  418 (586)
T ss_pred             CCCCcC---Cc--EEEeCCcccC--CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHH
Confidence            111111   12  8999999998  334458877765421100            00123333333322222 2222333


Q ss_pred             HHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCC
Q 036024          164 AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSG  241 (272)
Q Consensus       164 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~  241 (272)
                      .+....+........++..+++.+|++.|.+.|.+.|+++... -+...+++++.... +....++.|++.||.++--.-
T Consensus       419 AalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~i  498 (586)
T PLN02271        419 AALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAI  498 (586)
T ss_pred             HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccC
Confidence            4344444422223448889999999999999999999998653 34667889997432 457788889999999854333


Q ss_pred             CC---CCCCCeEEEEc------cCCHHHHHHHHHHHHHh
Q 036024          242 FG---PGGEEYIRISG------FGHRESILEASRRLEAL  271 (272)
Q Consensus       242 ~~---~~~~~~~R~s~------~~~~~~i~~~l~~l~~~  271 (272)
                      ++   +..++.+|++.      ...++|+++..+.|.++
T Consensus       499 P~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~  537 (586)
T PLN02271        499 FGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRA  537 (586)
T ss_pred             CCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHH
Confidence            32   22357899994      12467777766666554

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.52  E-value=1.1e-12  Score=114.68  Aligned_cols=205  Identities=14%  Similarity=0.114  Sum_probs=126.4

Q ss_pred             CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.+|++-......|... +++.+++|.++|++||+++|+||++.++ ..+...........+|  ++  +++|.+| .
T Consensus       200 ~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PD--i~--~~gK~lg-g  273 (433)
T PRK00615        200 HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPD--IT--VYGKILG-G  273 (433)
T ss_pred             CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCC--eE--EEccccc-C
Confidence            3455555544466667755 4677999999999999999999999866 2332111122222344  22  4899998 7


Q ss_pred             ccceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH--
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA--  197 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~--  197 (272)
                      |+.+|+++++++.        .+.+..   ....++.+.+++...|+.+.++....   +...++++++.+++.+.|+  
T Consensus       274 G~p~~av~~~~~i--------~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~---~~~~~~~~~~g~~l~~~l~~~  342 (433)
T PRK00615        274 GLPAAAVVAHKSI--------MDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE---QGFYTQLSTLEQNFLSPIEEM  342 (433)
T ss_pred             CcceeeeeecHHH--------HhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHH
Confidence            7888999998887        343321   11223444677888888887763322   2345566666666655554  


Q ss_pred             --hCCCeEecCCCceEEEeecCCCC--------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHH
Q 036024          198 --SLGIKVYGGINAPYVWAHFPGRK--------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESI  261 (272)
Q Consensus       198 --~~g~~~~~~~~~~~~~i~l~~~~--------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i  261 (272)
                        +.|+.+.....|.++.+.+....              ...+...++++ ||.+.|....     .. =+|...+++|+
T Consensus       343 ~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~-----~~-~ls~~ht~~di  415 (433)
T PRK00615        343 IRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSK-GVYLSPSPFE-----AS-FLSSAHSMENL  415 (433)
T ss_pred             HHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHC-CeeecCcccc-----cc-ceecCCCHHHH
Confidence              44554332224556666664210              12455556555 9999765411     11 25666799999


Q ss_pred             HHHHHHHHHhC
Q 036024          262 LEASRRLEALF  272 (272)
Q Consensus       262 ~~~l~~l~~~l  272 (272)
                      +++++++++++
T Consensus       416 d~~~~a~~~~~  426 (433)
T PRK00615        416 DYAQNVLIDSL  426 (433)
T ss_pred             HHHHHHHHHHH
Confidence            99999998764

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.52  E-value=5e-12  Score=118.92  Aligned_cols=253  Identities=11%  Similarity=0.045  Sum_probs=160.4

Q ss_pred             cccccCccc--chHHhcccc-eeEEeecCCCCCcccC-CCC-C----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            6 SVIVGQAGD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         6 ~~~~~~~~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      +++.+.+.+  ....+...| +++.+|.+.++..+++ +++ .    +++++|++++|+|-+|...+   +++|+++|++
T Consensus       618 ~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~  694 (993)
T PLN02414        618 VCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHD  694 (993)
T ss_pred             EEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHH
Confidence            444444444  555566678 9999999865433333 222 1    36889999999999998854   9999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcchH-H---HHH
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFPVI-N---DFN  148 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~~~-~---~~~  148 (272)
                      +|+.+++|.++......  ...+..+..+    ++.+|.+|.|+.|    |--+|.+.+.+.+....--+.. .   ...
T Consensus       695 ~Galv~vDgAq~~a~~~--l~~p~~~GaD----~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~  768 (993)
T PLN02414        695 NGGQVYMDGANMNAQVG--LTSPGFIGAD----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPR  768 (993)
T ss_pred             cCCEEEEEecCHHhccC--cCCccccCCC----EEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCccc
Confidence            99999999998641111  1222333222    8899999977522    3448999888766421111100 0   011


Q ss_pred             hhhhhccCC------cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCce--EEEeecC--
Q 036024          149 RIICTCFNG------ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAP--YVWAHFP--  217 (272)
Q Consensus       149 ~~~~~~~~~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~--~~~i~l~--  217 (272)
                      +.......+      .+.....++...+..-+.+.+++..++...+++++++.|++. ++.+.++.+..  =+.+.++  
T Consensus       769 r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l  848 (993)
T PLN02414        769 PEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPF  848 (993)
T ss_pred             ccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEecccc
Confidence            111110111      122333445555666677888899999999999999999873 44444432221  1223443  


Q ss_pred             ----CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          218 ----GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       218 ----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                          +.+..++.++|+ ++||.... ..| + ..+.+|++.  +.+++|+|+++++|+++
T Consensus       849 ~~~~g~~~~di~krL~-d~Gihapt-~~~-p-v~~~lmiepTE~~skeelDrf~~al~~i  904 (993)
T PLN02414        849 KNTAGIEPEDVAKRLM-DYGFHAPT-MSW-P-VPGTLMIEPTESESKAELDRFCDALISI  904 (993)
T ss_pred             ccccCCCHHHHHHHHH-HcCcEEee-ecc-c-cCCEEEEEeeeeCCHHHHHHHHHHHHHH
Confidence                245578888888 66998644 334 3 378899995  66999999999998764

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.52  E-value=1.8e-12  Score=113.99  Aligned_cols=205  Identities=18%  Similarity=0.208  Sum_probs=132.8

Q ss_pred             CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      .++.++++-..+...|... +++.+++|.++|+++|+++|+||++.++...|...........+|    +-+++|.++ .
T Consensus       217 ~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PD----i~~~gK~l~-g  291 (445)
T PRK09221        217 STIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPD----IITFAKGLT-N  291 (445)
T ss_pred             CcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCC----EEEeccccc-c
Confidence            3455666655576777754 566799999999999999999999986544443322223333344    237899997 5


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID  194 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  194 (272)
                      | ..+|.++++++..        +.+..       .....+++.++++..++.+.++....   +...++.+++.+++++
T Consensus       292 G~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~  360 (445)
T PRK09221        292 GAIPMGAVIASDEIY--------DAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE---EDLFERAAELAPYFED  360 (445)
T ss_pred             CcccceeeEEcHHHH--------HhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence            6 6789988888773        32211       12334555788887777777763322   2456788888888888


Q ss_pred             HHHhC-CCeEec--CCCceEEEeecCC--C----ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHH
Q 036024          195 TLASL-GIKVYG--GINAPYVWAHFPG--R----KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILE  263 (272)
Q Consensus       195 ~L~~~-g~~~~~--~~~~~~~~i~l~~--~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~  263 (272)
                      .|+++ +.....  ...|.+..+.+..  .    ....+...++++ ||.+.++       .+.+||+  +..+++|+++
T Consensus       361 ~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~-------~~~lr~~Ppl~~t~~eid~  432 (445)
T PRK09221        361 AVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEK-GLLVRYT-------GDTIALSPPLIIEKAQIDE  432 (445)
T ss_pred             HHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHC-CeEEeec-------CCEEEEECCccCCHHHHHH
Confidence            88775 222111  1134555555532  1    123455666555 9999653       2479999  5679999999


Q ss_pred             HHHHHHHhC
Q 036024          264 ASRRLEALF  272 (272)
Q Consensus       264 ~l~~l~~~l  272 (272)
                      ++++|+++|
T Consensus       433 ~~~~l~~~l  441 (445)
T PRK09221        433 LVDALGDAL  441 (445)
T ss_pred             HHHHHHHHH
Confidence            999998864

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.51  E-value=1.5e-12  Score=113.98  Aligned_cols=204  Identities=12%  Similarity=0.019  Sum_probs=132.2

Q ss_pred             CceEEEEecC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           45 RTDIIFFCSP-NNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        45 ~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++.+|++-.. ++-.|. .++.+.+++|.++|++|++++|+||++.++...+........+..+|  ++  +++|.++ .
T Consensus       207 ~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pD--i~--~~gK~l~-g  281 (427)
T TIGR00508       207 EIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPD--IL--CVGKALT-G  281 (427)
T ss_pred             cEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCC--EE--Eechhhh-c
Confidence            4445555432 555565 44789999999999999999999999977644443222222322344  23  3799997 7


Q ss_pred             cc-ceeEEEecccccccCCcchHHHHHhh-----hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH
Q 036024          123 GV-RLGWTVVPEELLFSSGFPVINDFNRI-----ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL  196 (272)
Q Consensus       123 g~-r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L  196 (272)
                      |+ .++.++.++++        .+.+...     ....++..++++..++.+.++....   +...++.+++.++|++.|
T Consensus       282 G~~p~~a~~~~~~~--------~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L  350 (427)
T TIGR00508       282 GYMTLSATVTTDKV--------AQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE---GEWQKQVSAIENQLKREL  350 (427)
T ss_pred             CcccceEEEEcHHH--------HHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHH
Confidence            74 67888887776        4444321     1223334677888877777762222   234678888888888888


Q ss_pred             HhCCCe-EecC--CCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHH
Q 036024          197 ASLGIK-VYGG--INAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEA  270 (272)
Q Consensus       197 ~~~g~~-~~~~--~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~  270 (272)
                      ++++.. ....  ..|.++.+.+.. .....+..+++++ ||.+.+..       ..+|++.  ..+++|++++++++++
T Consensus       351 ~~l~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~-Gv~~~~~~-------~~l~~~ppl~~t~~~id~~~~~l~~  422 (427)
T TIGR00508       351 SPLRKNPVVKDVRVLGAIGVVEMYKPVNVEELQKKFVEQ-GVWIRPFG-------KLIYVMPPYIITTEQLQKLTAALIE  422 (427)
T ss_pred             HHhhcCCCEEeEeccccEEEEEECCccCHHHHHHHHHHC-CeEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHH
Confidence            876321 1111  136667777753 2345666666665 99996532       3689974  4799999999999988


Q ss_pred             hC
Q 036024          271 LF  272 (272)
Q Consensus       271 ~l  272 (272)
                      +|
T Consensus       423 ~l  424 (427)
T TIGR00508       423 AL  424 (427)
T ss_pred             HH
Confidence            75

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.51  E-value=2.3e-12  Score=111.45  Aligned_cols=241  Identities=15%  Similarity=0.095  Sum_probs=138.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...+...| +++.++++++ ++.+|++.     .+++|+|+   |+||+|...+   +++|.++|++
T Consensus        74 d~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~-~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i~~~a~~  146 (379)
T PRK11658         74 DEVITPSLTWVSTLNMIVLLGATPVMVDVDRD-TLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAIRAIGER  146 (379)
T ss_pred             CEEEECCCcHHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHHHHHHHH
Confidence            56777665554 556677788 9999999866 56566333     26788877   5567898865   8899999999


Q ss_pred             cCCEEEEcccCCc-cccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc-
Q 036024           77 NGSIIIFDSAYAA-YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC-  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-  154 (272)
                      +|+++|+|++|.. ..+.+.  .+...    .  +.+.||++...+++.+.|+++.+++.+       .+++....... 
T Consensus       147 ~gi~vi~D~a~a~g~~~~~~--~~g~~----g--~~~~Sf~~~K~l~~g~GG~v~~~~~~~-------~~~~~~~~~~G~  211 (379)
T PRK11658        147 YGIPVIEDAAHAVGTYYKGR--HIGAR----G--TAIFSFHAIKNITCAEGGLVVTDDDEL-------ADRLRSLKFHGL  211 (379)
T ss_pred             cCCeEEEECCCccCCeECCe--ecCCC----C--CEEEeCCCCCcCcccCceEEEECCHHH-------HHHHHHHHHcCC
Confidence            9999999999984 223221  12111    1  124455533333455678888764442       22332221100 


Q ss_pred             ---------------------cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe-EecCCC----
Q 036024          155 ---------------------FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK-VYGGIN----  208 (272)
Q Consensus       155 ---------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~----  208 (272)
                                           ..........|+....+.   ..+++..++-+++.+.+++.|+++++. +..+..    
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql---~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~  288 (379)
T PRK11658        212 GVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQL---AKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQH  288 (379)
T ss_pred             CcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCce
Confidence                                 000111222333333332   445777788888888888999877533 222211    


Q ss_pred             ce-EEEeecC----CCChHHHHHHHHHhcCeEeeCCCCCCC------------C---------CCCeEEEEcc--CCHHH
Q 036024          209 AP-YVWAHFP----GRKSWDVFAEILEKTHITTVPGSGFGP------------G---------GEEYIRISGF--GHRES  260 (272)
Q Consensus       209 ~~-~~~i~l~----~~~~~~~~~~ll~~~gi~v~~g~~~~~------------~---------~~~~~R~s~~--~~~~~  260 (272)
                      .+ ...+.++    +.+..++...| ++.||.+..  .|.+            .         ....+.+.+.  .++++
T Consensus       289 ~~~~~~~~~~~~~~~~~r~~~~~~L-~~~gI~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~  365 (379)
T PRK11658        289 AWHLFIIRVDEERCGISRDALMEAL-KERGIGTGL--HFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDAD  365 (379)
T ss_pred             eEEEEEEEECCccccCCHHHHHHHH-HHCCCCCcc--cCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHH
Confidence            22 2233443    22445566655 455988652  1211            0         0233444443  47899


Q ss_pred             HHHHHHHHHHhC
Q 036024          261 ILEASRRLEALF  272 (272)
Q Consensus       261 i~~~l~~l~~~l  272 (272)
                      +++.++.|++++
T Consensus       366 ~~~i~~~i~~~~  377 (379)
T PRK11658        366 VDRVITALQQIA  377 (379)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998763

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.50  E-value=3.7e-12  Score=111.12  Aligned_cols=254  Identities=15%  Similarity=0.093  Sum_probs=154.7

Q ss_pred             ccccCccc--chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc-
Q 036024            7 VIVGQAGD--LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN-   77 (272)
Q Consensus         7 ~~~~~~~~--~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-   77 (272)
                      ++.+..-+  +...++..| +++.+|.+++ ++.+|++.     .+++.+|+++..||.||.+-|   +++|+++|+++ 
T Consensus       141 ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~-~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idp---i~~I~~i~~~~~  216 (431)
T TIGR01788       141 LVMGSNVQVCWEKFARYFDVELREVPMDPG-RYVIDPEQVVEAVDENTIGVVCILGTTYTGEYED---VKALNDALDEYN  216 (431)
T ss_pred             EEEcCcchHHHHHHHHHcCceeEEEecCCC-ceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCC---HHHHHHHHHHHH
Confidence            44444333  555666678 9999999874 45555433     267888999999999999977   89999999999 


Q ss_pred             -----CCEEEEcccCCcccc----CCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccc-cccCCcchHHH
Q 036024           78 -----GSIIIFDSAYAAYVT----DGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEEL-LFSSGFPVIND  146 (272)
Q Consensus        78 -----~~~vi~D~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~-~~~~~~~~~~~  146 (272)
                           ++++.+|.+|+.+..    +..+..+. .   ...-.+.-|.+|.+ |..|  +|+++..+.. ....+..-.+.
T Consensus       217 ~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~-~---~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~~~~~~~y  290 (431)
T TIGR01788       217 AKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR-L---PRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEELIFHVNY  290 (431)
T ss_pred             hhhCCCceEEEecccHHHHHHHhCCCchhhcC-C---CCceEEEECchhccCCCCC--cEEEEEeChHHcchhheecccc
Confidence                 999999999995432    22111111 1   11225666889976 6556  7988887642 11100000001


Q ss_pred             HHhhhhhccCCcchHHHHH--HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC-CCceEEEeecCC----
Q 036024          147 FNRIICTCFNGASNIAQAG--GLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGG-INAPYVWAHFPG----  218 (272)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~a--~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~i~l~~----  218 (272)
                      +...........+..+-.+  ....+...+...+++..++..+.++++.+.|++. ++++..+ .....+.+++++    
T Consensus       291 l~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~  370 (431)
T TIGR01788       291 LGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADP  370 (431)
T ss_pred             cCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCC
Confidence            1100000011111111111  2222333445677888999999999999999988 5888875 456667777763    


Q ss_pred             -CChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          219 -RKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       219 -~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                       .+..++...|. +.|+.+..-.... ..+...+|+++.  .+++.+++++..|+.+
T Consensus       371 ~~~~~~l~~~L~-~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~  426 (431)
T TIGR01788       371 GYTLYDLSHRLR-ERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAA  426 (431)
T ss_pred             CcCHHHHHHHHH-HCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence             34456566555 5598753322111 223456899973  3677888888888765

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.50  E-value=2.1e-12  Score=113.73  Aligned_cols=204  Identities=15%  Similarity=0.107  Sum_probs=134.9

Q ss_pred             CCceEEEEec-CCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCS-PNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~-p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++.+|++-- .+...|.. .+++.+++|.++|++||+++|.||++.++...+.......+...+|.+    +++|.+| 
T Consensus       220 ~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDiv----t~gKgl~-  294 (453)
T PRK06943        220 GKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFL----CLSKGIS-  294 (453)
T ss_pred             CceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeE----eeehhhc-
Confidence            4566666654 36666774 577889999999999999999999998875444333333333345533    4699998 


Q ss_pred             Cc-cceeEEEecccccccCCcchHHHHHh------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024          122 TG-VRLGWTVVPEELLFSSGFPVINDFNR------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID  194 (272)
Q Consensus       122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  194 (272)
                      .| +.+|.++++++.        .+.+..      ....++++.++++..++.+.++....   +...++.+++-+++.+
T Consensus       295 gG~~Pi~av~~~~ei--------~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~---~~l~~~~~~~G~~l~~  363 (453)
T PRK06943        295 GGYLPLSLVLSRDAI--------FAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAE---DDVLARNARKSARLRA  363 (453)
T ss_pred             cCcccceEEEEcHHH--------HHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence            78 589999999887        333321      12344555788888888888873322   3345566666667777


Q ss_pred             HHHhC----CCeEecCCCceEEEeecC-CCC-----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHH
Q 036024          195 TLASL----GIKVYGGINAPYVWAHFP-GRK-----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESIL  262 (272)
Q Consensus       195 ~L~~~----g~~~~~~~~~~~~~i~l~-~~~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~  262 (272)
                      .|+++    ++.-.. ..|.++-+++. +.+     ...+...++++ ||.+.+..       +.+||+  +..|++|++
T Consensus       364 ~L~~l~~~~~v~~vr-G~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~-Gll~~~~g-------~~l~~~Ppl~it~~eid  434 (453)
T PRK06943        364 ALAPLAAHPQVRHLR-QRGTIFAFDVALDGDAARTFSRRFFEAALER-ELLLRPIG-------TTVYLMPPYVLDDDEIA  434 (453)
T ss_pred             HHHHHhcCCCEEeEe-ccccEEEEEEccCCCcchHHHHHHHHHHHHC-CcEEEecC-------CEEEEeCCCcCCHHHHH
Confidence            77654    222222 24666667774 211     12345555554 99986531       358998  677999999


Q ss_pred             HHHHHHHHhC
Q 036024          263 EASRRLEALF  272 (272)
Q Consensus       263 ~~l~~l~~~l  272 (272)
                      +++++|+++|
T Consensus       435 ~~~~~l~~al  444 (453)
T PRK06943        435 WLAERTRATL  444 (453)
T ss_pred             HHHHHHHHHH
Confidence            9999998764

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.50  E-value=2.3e-12  Score=110.17  Aligned_cols=245  Identities=13%  Similarity=0.082  Sum_probs=157.9

Q ss_pred             cccccccCccc-ch-HHhcccc-e-eEEeecCCCCCcccC-CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            4 DSSVIVGQAGD-LE-DEVGKYC-N-IEYLECGPGNNFFPD-LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         4 d~~~~~~~~~~-~~-~~~~~~g-~-~~~~~~~~~~~~~~d-l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      |.+++.+.|+. +. ..++.+| . +..+..++...+.++ ++.   -+.+++++....||+..+   +++++..+  ++
T Consensus        84 ~~vLv~g~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~---~~~v~~vhnETSTGv~np---v~~i~~~~--~~  155 (374)
T TIGR01365        84 VDVLAWESFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF---KNDVVFTWNGTTSGVRVP---NGDFIPAD--RE  155 (374)
T ss_pred             CeEEEECHHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC---CCCEEEecCCCchheecc---cccccccc--CC
Confidence            45777787777 56 8888888 5 777776655555444 332   134678899999999987   44544322  58


Q ss_pred             CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc--------chHHH----
Q 036024           79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF--------PVIND----  146 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~--------~~~~~----  146 (272)
                      +++|+|.+-+.   ++.+..+...      -+++.|..|++|+|+ -+++++++++.+.+...        +..+.    
T Consensus       156 ~lliVDavSs~---g~~~l~~d~i------Dv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~  225 (374)
T TIGR01365       156 GLTICDATSAA---FAQDLDYHKL------DVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGG  225 (374)
T ss_pred             CcEEEEccchh---cCCCCChhHC------cEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhcccccc
Confidence            99999999764   3333333322      288888999998643 26778887777532110        11110    


Q ss_pred             -H-Hhhh-hhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCC-CeEecC----CCceEEEeecC
Q 036024          147 -F-NRII-CTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLG-IKVYGG----INAPYVWAHFP  217 (272)
Q Consensus       147 -~-~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~----~~~~~~~i~l~  217 (272)
                       + .... ..+.++++....+++..++.....+ .++.+.++++++++.+++.++++| +.+...    .+.....+.++
T Consensus       226 ~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~  305 (374)
T TIGR01365       226 KLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVV  305 (374)
T ss_pred             chhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeC
Confidence             0 0111 2345567777777777777533332 579999999999999999999998 666652    12233445554


Q ss_pred             C--C-----C-----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024          218 G--R-----K-----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE  269 (272)
Q Consensus       218 ~--~-----~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~  269 (272)
                      .  .     +     ..++...+ ++.||.+.+|..  ......|||+.  ..+.+|++.++..|+
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~i~~G~~--~~~~~~fRIg~~G~i~~~di~~l~~~l~  368 (374)
T TIGR01365       306 DPAIDALDEDAQADFAKELISTL-EKEGVAYDIGSY--RDAPSGLRIWCGATVEKSDLECLCPWLD  368 (374)
T ss_pred             CccccccccchhhHHHHHHHHHH-HHCCEEEecccc--ccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence            2  2     1     34555554 555999987763  23347899994  348999999999886

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.50  E-value=4.5e-12  Score=108.18  Aligned_cols=231  Identities=15%  Similarity=0.149  Sum_probs=137.4

Q ss_pred             eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024           24 NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP   96 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~   96 (272)
                      +.++++++++ ...+|.++      ..+||+|++-...+|-     +-+.+++.++|++.|++++.|-+|. +++.++..
T Consensus       143 ~~~~y~~d~~-~~~ID~d~l~~~a~~~kPklIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~  216 (399)
T PF00464_consen  143 ESVPYPVDPD-TGLIDYDELEKLAKEHKPKLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLF  216 (399)
T ss_dssp             EEEEEEB-TT-TSSB-HHHHHHHHHHH--SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS
T ss_pred             EEEeeeeecC-CCeECHHHHHHHHhhcCCCEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehhee
Confidence            7889999976 56667444      2689999997555442     2458999999999999999999996 56666654


Q ss_pred             CCccccCCCCCceEEEecCccccCCCccceeEEEecccc--cccC----CcchHHHHHhhhhhccCCcchHHHHHHH-Hh
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL--LFSS----GFPVINDFNRIICTCFNGASNIAQAGGL-AC  169 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~  169 (272)
                      +++...   .|  ++.+|.+|++  +|-|.|.+.++...  +...    ...+.+.+.+...+...+.+.....|+. ..
T Consensus       217 ~~P~~~---AD--vvt~sThKtl--~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAva  289 (399)
T PF00464_consen  217 PNPFPY---AD--VVTGSTHKTL--RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVA  289 (399)
T ss_dssp             --GCCT---SS--EEEEESSGGG---SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHH
T ss_pred             cCcccc---ce--EEEeeccccc--cccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHH
Confidence            444333   22  8999999999  66677988888110  0000    0112556655554444433444333333 33


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCC---C
Q 036024          170 LSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFG---P  244 (272)
Q Consensus       170 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~---~  244 (272)
                      +.+-.....++..+++-+|++.|.+.|.+.|+++... -++..+|+++... .+...+.+.|++.||.++.-.-.+   +
T Consensus       290 l~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~  369 (399)
T PF00464_consen  290 LKEALSPEFKEYAKQVVKNAKALAEALQERGFKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSP  369 (399)
T ss_dssp             HHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTT
T ss_pred             HhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCC
Confidence            3332234558899999999999999999999999753 3467889999632 244557778899999986422221   1


Q ss_pred             CCCCeEEEEc------cCCHHHHHHHHHH
Q 036024          245 GGEEYIRISG------FGHRESILEASRR  267 (272)
Q Consensus       245 ~~~~~~R~s~------~~~~~~i~~~l~~  267 (272)
                      .....+|++.      ...++|+.+.-+.
T Consensus       370 ~~~sGlRlGT~~lT~rG~~e~dm~~iA~~  398 (399)
T PF00464_consen  370 FVPSGLRLGTPALTRRGMKEEDMKEIAEL  398 (399)
T ss_dssp             TT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred             CCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence            2256899994      2257777776543

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PRK06105 aminotransferase; Provisional

Probab=99.50  E-value=3e-12  Score=113.11  Aligned_cols=204  Identities=11%  Similarity=-0.001  Sum_probs=131.3

Q ss_pred             CceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.+|++-..+...|.. .+++.+++|.++|++||+++|+||++.++...+...........+|    +-+++|.+| .|
T Consensus       218 ~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PD----i~~~gK~lg-gG  292 (460)
T PRK06105        218 TIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPD----ILVMSKQLS-SS  292 (460)
T ss_pred             ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCC----eeeeecccc-cC
Confidence            45555555446666765 5788899999999999999999999977644443323223333444    226899998 66


Q ss_pred             -cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024          124 -VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT  195 (272)
Q Consensus       124 -~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  195 (272)
                       +.+|.++++++.        .+.+..       ....++++.++++..++.+.++....   ++..++.+++.++|++.
T Consensus       293 ~~P~~av~~~~~i--------~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~  361 (460)
T PRK06105        293 YQPLSAVLMNEKV--------YDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEE---RDLVGNAAERGARLQAR  361 (460)
T ss_pred             cccceEEEEcHHH--------HHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHH
Confidence             589999998877        344332       11334556788888877777763322   34566777777777777


Q ss_pred             HHhC---CCeEecCCCceEEEeecCCC-------C-----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCH
Q 036024          196 LASL---GIKVYGGINAPYVWAHFPGR-------K-----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHR  258 (272)
Q Consensus       196 L~~~---g~~~~~~~~~~~~~i~l~~~-------~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~  258 (272)
                      |+++   ++...-..-|.+.-+++...       +     ...+...++ ++||.+.+.       .+.+|++  +..++
T Consensus       362 L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~-~~Gvl~~~~-------g~~i~l~Ppl~it~  433 (460)
T PRK06105        362 LRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAH-EHGVISRAM-------GDTLAFCPPLIITA  433 (460)
T ss_pred             HHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHH-HCCeEEEec-------CCEEEEECCCccCH
Confidence            7664   21111112466666666310       0     123444454 459999763       1478998  45599


Q ss_pred             HHHHHHHHHHHHhC
Q 036024          259 ESILEASRRLEALF  272 (272)
Q Consensus       259 ~~i~~~l~~l~~~l  272 (272)
                      +|+++++++|.++|
T Consensus       434 ~eid~~~~~l~~~l  447 (460)
T PRK06105        434 AQVDEMVDRFGRAL  447 (460)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998764

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.50  E-value=2.7e-12  Score=113.35  Aligned_cols=206  Identities=15%  Similarity=0.035  Sum_probs=132.1

Q ss_pred             CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.++++-..+.-.|.+. +++.++++.++|+++|+++|.||+..++...+.......+...+|.+    +++|.+| .|
T Consensus       231 ~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv----~~gKglg-gG  305 (464)
T PRK06938        231 LPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVV----VLSKAIG-GS  305 (464)
T ss_pred             ceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEE----Eeecccc-CC
Confidence            455665544355557654 58889999999999999999999999875444322222333345533    4699998 88


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----  199 (272)
                      +.+|.++++++. .        .+......++++.++++..|+.+.++....   ++..++.+++-+++++.|+++    
T Consensus       306 ~PlsAv~~~~~~-~--------~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~---~~l~~~~~~~G~~l~~~L~~l~~~~  373 (464)
T PRK06938        306 LPLAVVVYREWL-D--------TWQPGAHAGTFRGNQMAMAAGSATLRYIKE---HRLAEHAAAMGERLREHLRQLQRDY  373 (464)
T ss_pred             CceEEEeehhHh-h--------ccCCCCCCCCCCcCHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999999987653 1        111122445566888888888888873322   345556666666666666654    


Q ss_pred             CCeEecCCCceEEEeecCCC------------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHH
Q 036024          200 GIKVYGGINAPYVWAHFPGR------------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESIL  262 (272)
Q Consensus       200 g~~~~~~~~~~~~~i~l~~~------------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~  262 (272)
                      ++...-...|.++.+++...            +   ...+...+++ +|+.+.++..+    .+.+||.  +..|++|++
T Consensus       374 ~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~g~~----~~~l~~~Ppl~it~~eid  448 (464)
T PRK06938        374 PQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLR-RGLILELGGRH----GSVVRFLPPLIITAEQID  448 (464)
T ss_pred             CCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHH-CCeEEeecCCC----CCEEEEECCCccCHHHHH
Confidence            32111112466666766311            0   1234445555 59999764321    3578987  456999999


Q ss_pred             HHHHHHHHhC
Q 036024          263 EASRRLEALF  272 (272)
Q Consensus       263 ~~l~~l~~~l  272 (272)
                      +++++++++|
T Consensus       449 ~~~~~l~~~l  458 (464)
T PRK06938        449 EVAEIFAEAV  458 (464)
T ss_pred             HHHHHHHHHH
Confidence            9999998764

>PRK07482 hypothetical protein; Provisional

Probab=99.50  E-value=4.5e-12  Score=111.98  Aligned_cols=207  Identities=12%  Similarity=0.001  Sum_probs=134.0

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.+|++-..+...|.. .+++.+++|.++|++||+++|.||++.++...+...........+|.+    +++|.+| .
T Consensus       219 ~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv----~~gKgl~-g  293 (461)
T PRK07482        219 DTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLI----TVAKGLT-S  293 (461)
T ss_pred             CcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEE----EEccccc-c
Confidence            345666665446666776 467789999999999999999999999875444333333333345533    4799998 7


Q ss_pred             cc-ceeEEEecccccccCCcchHHHHH-------hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024          123 GV-RLGWTVVPEELLFSSGFPVINDFN-------RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID  194 (272)
Q Consensus       123 g~-r~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  194 (272)
                      |. .+|.++++++.        .+.+.       ......+++.++++..|+.+.++....   +...++.+++.+++.+
T Consensus       294 G~~Pi~av~~~~~i--------~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~---~~l~~~~~~~g~~l~~  362 (461)
T PRK07482        294 AYAPLSGSIVGEKV--------WDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILER---ENLVGNAAEVGAYFRA  362 (461)
T ss_pred             CccccceeeecHHH--------HHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHH
Confidence            85 89998888876        33332       122345566888888888888873322   2344556666666666


Q ss_pred             HHHhC----CCeEecCCCceEEEeecCC-C------C-----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccC
Q 036024          195 TLASL----GIKVYGGINAPYVWAHFPG-R------K-----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFG  256 (272)
Q Consensus       195 ~L~~~----g~~~~~~~~~~~~~i~l~~-~------~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~  256 (272)
                      .|+++    ++...-...|.++.+++.. .      +     ...+...++++ ||.+.++.     +.+.+|+.  +..
T Consensus       363 ~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~~-----~~~~i~~~Ppl~i  436 (461)
T PRK07482        363 RLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALER-GVIARAMP-----HGDILGFAPPLVL  436 (461)
T ss_pred             HHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHC-CcEEecCC-----CCCEEEEeCCCCC
Confidence            66543    3221111246676777741 1      0     12345555555 99986421     13568887  567


Q ss_pred             CHHHHHHHHHHHHHhC
Q 036024          257 HRESILEASRRLEALF  272 (272)
Q Consensus       257 ~~~~i~~~l~~l~~~l  272 (272)
                      +++|+++++++|+++|
T Consensus       437 t~~ei~~~~~~l~~~l  452 (461)
T PRK07482        437 TRAEADEIVAIAKDAV  452 (461)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            9999999999998764

>PRK07480 putative aminotransferase; Validated

Probab=99.49  E-value=2.9e-12  Score=112.95  Aligned_cols=203  Identities=11%  Similarity=0.027  Sum_probs=129.7

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      .++.+|++-..+...|.. .+++.+++|.++|++||+++|.||++.++...+...........+|.    -+++|.+| .
T Consensus       218 ~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDi----v~~gK~l~-g  292 (456)
T PRK07480        218 DNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDL----MTIAKGLT-S  292 (456)
T ss_pred             CcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCe----eeeehhhc-c
Confidence            355566665456666775 46667999999999999999999999876444433333333334452    36799998 7


Q ss_pred             cc-ceeEEEecccccccCCcchHHHHH----hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHH-HHHHHHHHHHH
Q 036024          123 GV-RLGWTVVPEELLFSSGFPVINDFN----RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYY-KENTKILIDTL  196 (272)
Q Consensus       123 g~-r~G~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~-~~~~~~l~~~L  196 (272)
                      |. .+|.++++++.        .+.+.    .+...++++.++++..|+.+.++....   +...++. +++.+++++.|
T Consensus       293 G~~Pi~av~~~~~i--------~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~---~~l~~~~~~~~g~~l~~~l  361 (456)
T PRK07480        293 GYIPMGAVGVGDRV--------AEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRD---EGIVERVRDDTGPYLQKRL  361 (456)
T ss_pred             CCccceEEEEcHHH--------HHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHH
Confidence            74 89999998877        34331    123445666888888888888873222   2344455 35555666666


Q ss_pred             HhC---CC--eEecCCCceEEEeecCCC--------C----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCC
Q 036024          197 ASL---GI--KVYGGINAPYVWAHFPGR--------K----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGH  257 (272)
Q Consensus       197 ~~~---g~--~~~~~~~~~~~~i~l~~~--------~----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~  257 (272)
                      +++   ++  .+.+  .|.+.-+++...        .    ...+...+++ .||.+.+.       .+.+|++.  ..+
T Consensus       362 ~~l~~~~~i~~vrG--~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~-------~~~l~~~Ppl~it  431 (456)
T PRK07480        362 RELADHPLVGEVRG--VGLVGAIELVKDKATRERFEAGGGVGTICRDHCFA-NGLIMRAV-------GDRMIISPPLVIT  431 (456)
T ss_pred             HHhhcCCCeeeEEe--ecceEEEEEeccccccccCcchhhHHHHHHHHHHH-CCcEEeec-------CCEEEEECCCCCC
Confidence            543   32  2222  466666666310        1    1233444555 49998642       14688884  459


Q ss_pred             HHHHHHHHHHHHHhC
Q 036024          258 RESILEASRRLEALF  272 (272)
Q Consensus       258 ~~~i~~~l~~l~~~l  272 (272)
                      ++|+++++++|+++|
T Consensus       432 ~~eid~~~~~l~~al  446 (456)
T PRK07480        432 HAEIDELVEKARKAL  446 (456)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998764

>PRK07481 hypothetical protein; Provisional

Probab=99.49  E-value=4.1e-12  Score=111.97  Aligned_cols=205  Identities=16%  Similarity=0.103  Sum_probs=132.2

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.+|++-..+.-.|.. .+++.+++|.++|+++|+++|.||++.++...+...........+|.+    +++|.+| .
T Consensus       212 ~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv----~~gKgl~-g  286 (449)
T PRK07481        212 DTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIM----CLAKGIT-S  286 (449)
T ss_pred             CcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEE----EEeeccc-C
Confidence            456666666556666775 466779999999999999999999999765444322222233344532    4699998 7


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID  194 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  194 (272)
                      | +.+|.++++++.        .+.+..       .....+++.++++..|+.+.++....   +...++.+++.+++++
T Consensus       287 G~~Pi~av~~~~~i--------~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~  355 (449)
T PRK07481        287 GYVPLGATMVNARI--------ADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVR---EDLPANAAKRGAYLLE  355 (449)
T ss_pred             CCcCceEEEEcHHH--------HHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHH
Confidence            7 589999998877        344422       12344555788888888888763322   3455666666777777


Q ss_pred             HHHhC----CCeEecCCCceEEEeecCCC-------C-----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccC
Q 036024          195 TLASL----GIKVYGGINAPYVWAHFPGR-------K-----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFG  256 (272)
Q Consensus       195 ~L~~~----g~~~~~~~~~~~~~i~l~~~-------~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~  256 (272)
                      .|+++    ++...-...|.++.+.+...       +     ...+...++++ |+.+.+..       ..+|++  +..
T Consensus       356 ~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~g-------~~i~l~Ppl~i  427 (449)
T PRK07481        356 GLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVAREN-GVLVRPSG-------TKIILSPPLVI  427 (449)
T ss_pred             HHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhC-CeEEEecC-------CEEEEECCCCC
Confidence            77664    32111112466666666311       1     12344455554 99997632       248888  556


Q ss_pred             CHHHHHHHHHHHHHhC
Q 036024          257 HRESILEASRRLEALF  272 (272)
Q Consensus       257 ~~~~i~~~l~~l~~~l  272 (272)
                      |++|+++++++|+++|
T Consensus       428 t~~eid~~~~~l~~~l  443 (449)
T PRK07481        428 QREDVDRIVDALDAGL  443 (449)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            9999999999998764

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.49  E-value=1.3e-12  Score=115.34  Aligned_cols=203  Identities=17%  Similarity=0.206  Sum_probs=128.0

Q ss_pred             CceEEEEecCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.++++-......|.+.+ ++.+++|.++|++||+++|+||++.++ ..+.......+...+|    +.+++|.+| .|
T Consensus       246 ~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PD----i~t~gK~lg-gG  319 (474)
T PLN02482        246 EIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPD----LTTLGKVIG-GG  319 (474)
T ss_pred             ceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCC----EEEecchhh-CC
Confidence            4555555544666776655 678999999999999999999999876 3332222222233344    237899998 88


Q ss_pred             cceeEEEecccccccCCcchHHHHH---hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFN---RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-  199 (272)
                      +.+|.++++++.        .+.+.   ......+++.++++..|+.+.++....   +...++++++.++|++.|.++ 
T Consensus       320 ~Pigav~g~~ei--------~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~  388 (474)
T PLN02482        320 LPVGAYGGRREI--------MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAG  388 (474)
T ss_pred             CceEEEEEcHHH--------HHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHH
Confidence            999999888877        34432   122334444677887777777763222   346667777777777777664 


Q ss_pred             ---CCeEe-cCCCceEEEeecC--C---------CC---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHH
Q 036024          200 ---GIKVY-GGINAPYVWAHFP--G---------RK---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESI  261 (272)
Q Consensus       200 ---g~~~~-~~~~~~~~~i~l~--~---------~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i  261 (272)
                         |..+. ....+++ .+.+.  .         .+   ...+...++++ ||++.|.. +.   .+ + +++..|++|+
T Consensus       389 ~~~g~~~~~~~v~g~~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-Gv~~~~~~-~~---~~-~-psl~ht~~dI  460 (474)
T PLN02482        389 KKAGHEMCGGYISGMF-GFFFTEGPVYNFADAKKSDTAKFARFHRGMLEE-GVYLAPSQ-FE---AG-F-TSLAHTEEDI  460 (474)
T ss_pred             HhcCCCEEEcccceEE-EEEEecCCccChhhhccCCHHHHHHHHHHHHHC-CeEEeccC-CC---CC-c-CCCCCCHHHH
Confidence               44443 2223433 23221  0         01   12455556655 99997632 11   11 1 5667799999


Q ss_pred             HHHHHHHHHhC
Q 036024          262 LEASRRLEALF  272 (272)
Q Consensus       262 ~~~l~~l~~~l  272 (272)
                      +++++++++++
T Consensus       461 d~~l~al~~~l  471 (474)
T PLN02482        461 DFTIAAAERVL  471 (474)
T ss_pred             HHHHHHHHHHH
Confidence            99999998864

>PLN02452 phosphoserine transaminase

Probab=99.49  E-value=3.2e-12  Score=109.19  Aligned_cols=241  Identities=12%  Similarity=0.133  Sum_probs=158.2

Q ss_pred             ccccCccc-chHHhcccc-eeEEeecCCCCCc--ccC---CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            7 VIVGQAGD-LEDEVGKYC-NIEYLECGPGNNF--FPD---LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         7 ~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~--~~d---l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      +..+.|+. +...++++| ..+... .+..++  .++   ++..++++.+.+++.+..||+.+.  +++++.      ++
T Consensus       101 ~~~G~fg~r~~~~a~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~hnETstGv~~~--~~~~i~------~~  171 (365)
T PLN02452        101 VVTGSWSKKAAKEAKKYCKTNVIAS-GKDEKYTKIPSVSEWELTPDAKFVHICANETIHGVEFK--DYPDVG------NV  171 (365)
T ss_pred             EECCHHHHHHHHHHHHhCCCcEEEe-cCCCCCCCCCChHHcCCCCCCcEEEECCCCCCCcEecC--cccccC------CC
Confidence            34456666 777888888 333332 222222  233   333467899999999999999643  244443      38


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcch--HHHHHhhh--hhcc
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPV--INDFNRII--CTCF  155 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~  155 (272)
                      ++|+|.+...   ++.+..+..+.      +...|..|.+|.+|  +|.++++++.+.......  .-++....  ....
T Consensus       172 ~lvVDa~Ss~---g~~pidv~~~~------v~~~saqK~lGP~G--l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~  240 (365)
T PLN02452        172 PLVADMSSNF---LSKPVDVSKYG------VIYAGAQKNVGPSG--VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLY  240 (365)
T ss_pred             eEEEECCccc---cCcccCHHHcC------EEEEecccccCCCC--eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCcc
Confidence            9999999875   23234444442      34468999999888  788999888864321110  11111111  2233


Q ss_pred             CCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhC-CCeEe--cC--CCceEEEeecCCCChHHHHHHHH
Q 036024          156 NGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASL-GIKVY--GG--INAPYVWAHFPGRKSWDVFAEIL  229 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~--~~~~~~~i~l~~~~~~~~~~~ll  229 (272)
                      .+++....+++.++++....+ .++.+.++.+++++++++.|++. |+...  .+  ...+.+.+.+++....+.+.+.+
T Consensus       241 ~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~  320 (365)
T PLN02452        241 NTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSELEAEFVKEA  320 (365)
T ss_pred             CChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCchhHHHHHHHH
Confidence            568888888888888744433 57999999999999999999985 76211  11  24567778887644555566666


Q ss_pred             HhcCeEeeCCCCCCCCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024          230 EKTHITTVPGSGFGPGGEEYIRISGFG--HRESILEASRRLEAL  271 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~~~~~~~R~s~~~--~~~~i~~~l~~l~~~  271 (272)
                      ++.|+...+|+.-    -+.+|+|+++  +.++++.+++.++++
T Consensus       321 ~~~g~~~~~G~r~----~gg~R~s~yna~~~~~v~~L~~~m~~f  360 (365)
T PLN02452        321 AKAGMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDF  360 (365)
T ss_pred             HHCCCcccCCccc----cCceEEECcCCCCHHHHHHHHHHHHHH
Confidence            7779999998743    2349999755  889999999988764

>PRK07036 hypothetical protein; Provisional

Probab=99.49  E-value=3.9e-12  Score=112.46  Aligned_cols=205  Identities=14%  Similarity=0.059  Sum_probs=132.6

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCcc-ccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIY-EIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++.++++-..+...|.. .+++.+++|.++|++||+++|.||++.++...+...... .+...+|.    -+++|.+| 
T Consensus       219 ~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDi----vt~gK~l~-  293 (466)
T PRK07036        219 DNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDI----ITFAKGLT-  293 (466)
T ss_pred             CceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCE----EEEccccc-
Confidence            456666666556666775 467779999999999999999999998764444322222 22334452    25799998 


Q ss_pred             Cc-cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024          122 TG-VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILI  193 (272)
Q Consensus       122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  193 (272)
                      .| +.+|.++++++.        .+.+..       +...++++.++++..++.+.++....   +...++.+++.++|+
T Consensus       294 gG~~Pi~av~~~~~i--------~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~---~~l~~~~~~~g~~l~  362 (466)
T PRK07036        294 SGYQPLGAVIISERL--------LDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMER---EGLCEHVREVGPYFE  362 (466)
T ss_pred             cCccccEEEEEcHHH--------HHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHH
Confidence            78 489999998887        333321       22334556788888888888863322   345566777777777


Q ss_pred             HHHHhC---CCeEecCCCceEEEeecCCC--------C----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccC
Q 036024          194 DTLASL---GIKVYGGINAPYVWAHFPGR--------K----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFG  256 (272)
Q Consensus       194 ~~L~~~---g~~~~~~~~~~~~~i~l~~~--------~----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~  256 (272)
                      +.|+++   ++...-...|.++.+++...        .    ...+...++++ ||.+.+..       +.+|++  +..
T Consensus       363 ~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~-------~~~~l~Ppl~i  434 (466)
T PRK07036        363 ERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQER-GLLVRPLE-------HLCVLSPPLII  434 (466)
T ss_pred             HHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHC-CcEEeecC-------CEEEEeCCCcC
Confidence            777654   22111112466677777311        0    12344455554 99987531       467888  556


Q ss_pred             CHHHHHHHHHHHHHhC
Q 036024          257 HRESILEASRRLEALF  272 (272)
Q Consensus       257 ~~~~i~~~l~~l~~~l  272 (272)
                      |++|+++++++|+++|
T Consensus       435 t~~~id~~~~~l~~al  450 (466)
T PRK07036        435 TRAQIDEIVAILRAAI  450 (466)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            9999999999998764

>PRK06917 hypothetical protein; Provisional

Probab=99.48  E-value=4.8e-12  Score=111.40  Aligned_cols=211  Identities=13%  Similarity=0.082  Sum_probs=132.9

Q ss_pred             CceEEEEecCCC-cccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           45 RTDIIFFCSPNN-PTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        45 ~~~~i~~~~p~n-ptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++.++++--.+. ..|. ..+++.+++|.++|+++|+++|.||++.++...+.......+...+|.    -+++|.+| .
T Consensus       199 ~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi----~~~gK~l~-~  273 (447)
T PRK06917        199 HIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDI----MTLGKGLG-A  273 (447)
T ss_pred             ceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCE----EEeeehhc-c
Confidence            456666653343 3344 557888999999999999999999999876434432222233334452    36799998 7


Q ss_pred             cc-ceeEEEecccccccCCcchHHHHHh----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024          123 GV-RLGWTVVPEELLFSSGFPVINDFNR----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA  197 (272)
Q Consensus       123 g~-r~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~  197 (272)
                      |. .+|.++++++.        .+.+..    ....++++.++++..++.+.++....   +...++.+++.++|++.|+
T Consensus       274 G~~Pi~a~~~~~~i--------~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~  342 (447)
T PRK06917        274 GYTPIAATVVSDRV--------MEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEK---HNLPEKAAEKGEYLIKGLQ  342 (447)
T ss_pred             CCcceEEEEEcHHH--------HHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHH
Confidence            85 89999998877        333322    12234555788888888888863222   3455677777777777776


Q ss_pred             hC----CCeEecCCCceEEEeecCC--------CC----hHHHHHHHHHhcCeEeeCCCC-CCCCCCCeEEEE--ccCCH
Q 036024          198 SL----GIKVYGGINAPYVWAHFPG--------RK----SWDVFAEILEKTHITTVPGSG-FGPGGEEYIRIS--GFGHR  258 (272)
Q Consensus       198 ~~----g~~~~~~~~~~~~~i~l~~--------~~----~~~~~~~ll~~~gi~v~~g~~-~~~~~~~~~R~s--~~~~~  258 (272)
                      ++    ++...-...|.++.+.+..        ..    ...+...++++ ||.+.+... ......+.+|++  +..|+
T Consensus       343 ~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~  421 (447)
T PRK06917        343 KVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKN-GLLLYPAVAGQDGKEGDAVIIAPPMTITY  421 (447)
T ss_pred             HHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhC-CcEEEecccccCCCCCCEEEEECCCcCCH
Confidence            64    3211111245666666621        01    22344455554 999976421 111124678998  45799


Q ss_pred             HHHHHHHHHHHHhC
Q 036024          259 ESILEASRRLEALF  272 (272)
Q Consensus       259 ~~i~~~l~~l~~~l  272 (272)
                      +|+++++++|+++|
T Consensus       422 ~eid~~~~~l~~~l  435 (447)
T PRK06917        422 SELDELLSIFAKSV  435 (447)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998764

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.48  E-value=3.3e-12  Score=112.05  Aligned_cols=202  Identities=16%  Similarity=0.184  Sum_probs=128.7

Q ss_pred             CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.++++-..++..|.+. +++.+++|.++|+++|+++|.||++.++- .+...........+|.    -+++|.+| .|
T Consensus       200 ~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~R-t~~~~a~~~~gv~PDi----vt~gK~lg-gG  273 (428)
T PRK12389        200 EVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFR-FMYGGAQDLLGVEPDL----TALGKIIG-GG  273 (428)
T ss_pred             cEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCcchhhHHhCCCCCe----eeechhhc-CC
Confidence            455555555576778655 57779999999999999999999998762 2211111122333442    37899998 88


Q ss_pred             cceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh--
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS--  198 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~--  198 (272)
                      +.+|.++++++.        .+.+..   ....++++.++++..|+.+.++....   +...++.+++.+++++.|++  
T Consensus       274 ~Pi~av~~~~~i--------~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~  342 (428)
T PRK12389        274 LPIGAYGGRKDI--------MEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ---EGVYEKLDRLGAMLEEGILEAA  342 (428)
T ss_pred             CceeEEeEHHHH--------HhhhccCCCcccccCCccCHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHH
Confidence            999999888877        333321   22334555788888888888873322   23556677777777777765  


Q ss_pred             --CCC--eEecCCCceEEEeecCC--C---------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHH
Q 036024          199 --LGI--KVYGGINAPYVWAHFPG--R---------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRES  260 (272)
Q Consensus       199 --~g~--~~~~~~~~~~~~i~l~~--~---------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~  260 (272)
                        .++  .+... .|++ -+.+..  .         +   ...+...+++ +||.+.+..      .+.+.+++..+++|
T Consensus       343 ~~~~~~~~v~r~-~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~------~~~~~~~l~~t~e~  413 (428)
T PRK12389        343 EKHGITITINRL-KGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLMLN-QGINLAPSK------YEAWFLTTAHTEED  413 (428)
T ss_pred             HhCCCCEEEEec-CcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHHH-CCcEeecCC------CCCeeecCCCCHHH
Confidence              343  33332 3433 344421  0         1   1234444544 599997742      22356777789999


Q ss_pred             HHHHHHHHHHhC
Q 036024          261 ILEASRRLEALF  272 (272)
Q Consensus       261 i~~~l~~l~~~l  272 (272)
                      ++++++++++++
T Consensus       414 id~~~~~l~~~l  425 (428)
T PRK12389        414 IEETLEAVDRAF  425 (428)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998764

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.47  E-value=7.2e-12  Score=110.73  Aligned_cols=204  Identities=12%  Similarity=0.068  Sum_probs=129.0

Q ss_pred             CCceEEEEec-CCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCS-PNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++.++++-- .++-.|. ..+++.++++.++|+++|+++|.||++.++...+...........+|.+    +++|.+| 
T Consensus       235 ~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv----~~gKgl~-  309 (472)
T PRK08742        235 GEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLL----CLSKGLT-  309 (472)
T ss_pred             CceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEE----EEccccc-
Confidence            4555555553 2666676 4577889999999999999999999999876555433333333345533    4699998 


Q ss_pred             Ccc-ceeEEEecccccccCCcchHHHHH------hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024          122 TGV-RLGWTVVPEELLFSSGFPVINDFN------RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID  194 (272)
Q Consensus       122 ~g~-r~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  194 (272)
                      .|. .+|.++++++.        .+.+.      .....++++.++++..|+.+.++....   +...++.++..+++++
T Consensus       310 gG~~Plaav~~~~ei--------~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~---~~l~~~~~~~g~~l~~  378 (472)
T PRK08742        310 GGFLPLSAVLATQQL--------YDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFAD---DDVIARNQPTAARMTQ  378 (472)
T ss_pred             CCCCCcceeeccHHH--------HHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHH
Confidence            784 89999998887        33332      112344555788888888888873222   2233444444444444


Q ss_pred             HHHh---CCC-eEecCCCceEEEeecCC-CC-------h----HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccC
Q 036024          195 TLAS---LGI-KVYGGINAPYVWAHFPG-RK-------S----WDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFG  256 (272)
Q Consensus       195 ~L~~---~g~-~~~~~~~~~~~~i~l~~-~~-------~----~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~  256 (272)
                      .++.   +++ .-.. ..|.++-+++.. ..       .    ..+...++++ ||.+.+.      + +.+||.  +..
T Consensus       379 ~~~~~~~~~~i~dvR-G~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~------g-~vi~~~PpL~i  449 (472)
T PRK08742        379 LAAQIGEHPHVADVR-QAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALAR-GVVLRPL------G-DVLYWMPPYCV  449 (472)
T ss_pred             HHHHHhcCCCeeeEe-ccceEEEEEeccCccccccCCchhHHHHHHHHHHHHC-CeEEEec------C-CEEEEECCCCC
Confidence            4433   332 1122 246677777631 10       1    2344455554 9999752      1 479998  566


Q ss_pred             CHHHHHHHHHHHHHhC
Q 036024          257 HRESILEASRRLEALF  272 (272)
Q Consensus       257 ~~~~i~~~l~~l~~~l  272 (272)
                      +++|+++++++|+++|
T Consensus       450 t~~ei~~~~~~l~~~l  465 (472)
T PRK08742        450 DEAQLALLADTTRHAI  465 (472)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            9999999999998864

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.47  E-value=9.7e-12  Score=108.89  Aligned_cols=115  Identities=24%  Similarity=0.346  Sum_probs=78.0

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+.     +...+...| +++.++.+....+.--+  .+++++|++++|+||||.+++   +++|+++|+++
T Consensus       103 d~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai--~~~tklV~vesp~NptG~v~d---l~~I~~la~~~  177 (427)
T PRK05994        103 DEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAI--TPRTKAIFIESIANPGGTVTD---IAAIAEVAHRA  177 (427)
T ss_pred             CEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCeecC---HHHHHHHHHHc
Confidence            45565554433     233456678 88888764211111112  267999999999999999987   88999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEe
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV  131 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~  131 (272)
                      ++++|+|+++.... .  ..++ .+.  .|  +++.|++|.+|.+|-.+|.+++
T Consensus       178 gi~livD~a~a~~~-~--~~pl-~~g--aD--ivv~S~tK~lgg~~~~~gG~v~  223 (427)
T PRK05994        178 GLPLIVDNTLASPY-L--IRPI-EHG--AD--IVVHSLTKFLGGHGNSMGGIIV  223 (427)
T ss_pred             CCEEEEECCccccc-c--CCcc-ccC--Cc--EEEEcCccccCCCCCcEEEEEE
Confidence            99999999997421 1  1122 221  22  8899999999866666676565

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.47  E-value=1.7e-11  Score=106.82  Aligned_cols=176  Identities=16%  Similarity=0.157  Sum_probs=104.6

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.+.     +...+...| ++..+....+    ++ +++  .+++|+|++.+|+||++.+.+   +++|+++|
T Consensus       101 D~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d----~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA  173 (432)
T PRK06702        101 DHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLT----ADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAA  173 (432)
T ss_pred             CEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCC----HHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHH
Confidence            56666665443     122357788 8888865311    11 222  378999999999999999987   99999999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCcc-----ccCCCccce-----eEEEecccccccCC----
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSK-----FSGFTGVRL-----GWTVVPEELLFSSG----  140 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-----~~g~~g~r~-----G~~~~~~~~~~~~~----  140 (272)
                      +++|+++|+|+++..    +....+.....    -|++.|+||     ..+++|.++     +|...+...+.+.-    
T Consensus       174 ~~~gi~livD~T~~t----P~~~~pl~~GA----DIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~  245 (432)
T PRK06702        174 KELEVPFIVDNTLAT----PYLCQAFEHGA----NIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYH  245 (432)
T ss_pred             HHcCCEEEEECCCCc----hhhCChhhcCC----CEEEEccccccCCCcceeceEEEeCCCccccccccccccccccccc
Confidence            999999999999852    10011112211    299999999     555555554     44443222211100    


Q ss_pred             ----------cchHH-HHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          141 ----------FPVIN-DFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       141 ----------~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                                ..+.. .............++.....+...++     .++.+.++.++++..+.+.|+.+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~-----Tl~lR~~r~~~Na~~la~~L~~~  310 (432)
T PRK06702        246 GVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLE-----TLHLRMERHSENALAVAKWLADH  310 (432)
T ss_pred             ccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccC-----cHHHHHHHHHHHHHHHHHHHHhC
Confidence                      00000 11111122223355554444444443     34566677789999999999987

>PRK06062 hypothetical protein; Provisional

Probab=99.47  E-value=6.7e-12  Score=110.60  Aligned_cols=203  Identities=17%  Similarity=0.147  Sum_probs=128.3

Q ss_pred             CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.+|++-..+...|... +++.+++|.++|+++|+++|+||++.++...+...........+|    +-+++|.+| .
T Consensus       213 ~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PD----i~t~gK~lg-g  287 (451)
T PRK06062        213 STIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPD----LITFAKGVN-S  287 (451)
T ss_pred             CceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCC----eeeechhhh-c
Confidence            3455666654465567664 677799999999999999999999997643332212222333445    336899998 7


Q ss_pred             cc-ceeEEEecccccccCCcchHHHHHh--hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHH-HHHHHHHHh
Q 036024          123 GV-RLGWTVVPEELLFSSGFPVINDFNR--IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENT-KILIDTLAS  198 (272)
Q Consensus       123 g~-r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~-~~l~~~L~~  198 (272)
                      |. .+|.++++++.        .+.+..  +...++++.++++..++.+.++....   +...++.+++. +++++.|++
T Consensus       288 G~~Pigav~~~~~i--------~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~---~~l~~~~~~~G~~~l~~~L~~  356 (451)
T PRK06062        288 GYVPLGGVAISEAI--------AATFADRPYPGGLTYSGHPLACAAAVATINAMEE---EGIVENAARIGAEVLGPGLRE  356 (451)
T ss_pred             CCcCcEEEEEcHHH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHH
Confidence            84 89999998877        444432  12334556778888888888863322   23445555554 456666655


Q ss_pred             C----CC--eEecCCCceEEEeecCCC---------------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--c
Q 036024          199 L----GI--KVYGGINAPYVWAHFPGR---------------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--F  255 (272)
Q Consensus       199 ~----g~--~~~~~~~~~~~~i~l~~~---------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~  255 (272)
                      +    +.  .+.+  .|.++.+.+...               ....+...+++ +||.+.+.       .+.+|++.  .
T Consensus       357 l~~~~~~v~~vrG--~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gvl~~~~-------~~~lrl~ppl~  426 (451)
T PRK06062        357 LAERHPSVGEVRG--LGVFWALELVADRETREPLAPYGASSAAMAAVKAACKE-RGLLPFVN-------GNRIHVVPPCT  426 (451)
T ss_pred             HHhcCCcEEeEec--cccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHH-CCcEEeec-------CCEEEEECCcc
Confidence            3    32  2222  355555665310               02245555554 49998642       24689984  6


Q ss_pred             CCHHHHHHHHHHHHHhC
Q 036024          256 GHRESILEASRRLEALF  272 (272)
Q Consensus       256 ~~~~~i~~~l~~l~~~l  272 (272)
                      .+++|+++++++|+++|
T Consensus       427 ~t~~eid~~~~~l~~~l  443 (451)
T PRK06062        427 VTEDEVREGLAILDAAL  443 (451)
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence            69999999999998764

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.46  E-value=7.3e-12  Score=110.67  Aligned_cols=204  Identities=13%  Similarity=0.074  Sum_probs=133.9

Q ss_pred             CCceEEEEec-CCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCS-PNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++.++++-- .+...|. ..+++.+++|.++|+++|+++|.||++.++...+.......+...+|.+    +++|.+| 
T Consensus       213 ~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv----~~gKgl~-  287 (466)
T PRK07030        213 DEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFL----CLSKALT-  287 (466)
T ss_pred             CceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEE----eeehhcc-
Confidence            4555666554 2555666 4566779999999999999999999998775444332223333345533    4699998 


Q ss_pred             Cc-cceeEEEecccccccCCcchHHHHH-------hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024          122 TG-VRLGWTVVPEELLFSSGFPVINDFN-------RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILI  193 (272)
Q Consensus       122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  193 (272)
                      .| +.+|.++++++.        .+.+.       ......+++.++++..|+.+.++....   +...++.+++-++++
T Consensus       288 gG~~Pi~av~~~~ei--------~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~---~~l~~~~~~~G~~l~  356 (466)
T PRK07030        288 GGYLPLAAVLTTDTV--------YQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQ---DNVIENNRALARRMA  356 (466)
T ss_pred             CCcccceEEEecHHH--------HHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHH
Confidence            88 489999998887        33332       123445556788888888888873322   345566677777777


Q ss_pred             HHHHhC---C-CeEecCCCceEEEeecCC-CC-----------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--cc
Q 036024          194 DTLASL---G-IKVYGGINAPYVWAHFPG-RK-----------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GF  255 (272)
Q Consensus       194 ~~L~~~---g-~~~~~~~~~~~~~i~l~~-~~-----------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~  255 (272)
                      +.|+++   . +.-.. ..|.++.+++.. ..           ...+..+++++ |+.+.+.       ...+|+.  +.
T Consensus       357 ~~L~~l~~~~~v~~vr-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~-------g~~i~~~Ppl~  427 (466)
T PRK07030        357 EATAHLADHPHVAEVR-QTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALER-GALLRPL-------GSVVYFLPPYV  427 (466)
T ss_pred             HHHHHHhcCCCEEEeE-eceeEEEEEeccCccccccCcchhHHHHHHHHHHHHC-CeEEEec-------CCEEEEECCcc
Confidence            777664   2 11122 246667777631 10           12344555555 9999652       1468887  46


Q ss_pred             CCHHHHHHHHHHHHHhC
Q 036024          256 GHRESILEASRRLEALF  272 (272)
Q Consensus       256 ~~~~~i~~~l~~l~~~l  272 (272)
                      .+++|+++++++|+++|
T Consensus       428 it~~eid~~~~~l~~al  444 (466)
T PRK07030        428 ITPEQIDFLAEVASEGI  444 (466)
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence            69999999999998864

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.46  E-value=1.5e-11  Score=106.61  Aligned_cols=242  Identities=14%  Similarity=0.058  Sum_probs=141.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----C----CCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----T----SRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++.++.+. +...+...| +++.++++++ .+.+|++.     .    +++++|+++   |++|...+   +++|.+
T Consensus        70 d~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~---~~~i~~  142 (380)
T TIGR03588        70 DRVWTTPITFVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVD---MQAIAA  142 (380)
T ss_pred             CEEEeCCcchHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcccCCCceEEEEe---CCCCccCC---HHHHHH
Confidence            56777766544 666677788 9999999765 45555332     1    467888865   46888765   899999


Q ss_pred             HHHHcCCEEEEcccCCccc-cCCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024           73 FARNNGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR  149 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~  149 (272)
                      +|+++++++|+|++|+... +.+.  .+... ...|  +.+.|++  |.++.+  ..|+++.+++.+       .+.+..
T Consensus       143 l~~~~~~~lI~D~a~a~g~~~~~~--~~g~~-~~~d--~~~~S~~~~K~~~~~--~GG~v~~~~~~~-------~~~~~~  208 (380)
T TIGR03588       143 LAKKHGLKIIEDASHALGAEYGGK--PVGNC-RYAD--ATVFSFHPVKIITTA--EGGAVTTNDEEL-------AERMRL  208 (380)
T ss_pred             HHHHcCCEEEEECCCcccCccCCE--eCCCc-cccc--eEEEecCCCCccccc--CceEEEECCHHH-------HHHHHH
Confidence            9999999999999998642 2321  12110 0123  6666665  888633  357777765542       333322


Q ss_pred             hhhhcc-------------------------CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeE
Q 036024          150 IICTCF-------------------------NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKV  203 (272)
Q Consensus       150 ~~~~~~-------------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~  203 (272)
                      ......                         ...+.+  .++....+   ...+++..++-+++.+++.+.|+++ ++..
T Consensus       209 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l--~aa~g~~q---L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~  283 (380)
T TIGR03588       209 LRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDI--QAALGLSQ---LKKLDRFVAKRREIAARYDRLLKDLPYFTP  283 (380)
T ss_pred             HHHCCCCCCcccccccccCcceeeeeccccccCccHH--HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCccC
Confidence            211110                         001111  11111111   2335677788888889999999887 4443


Q ss_pred             ecCC-C---ceE-EEeecC---CCChHHHHHHHHHhcCeEeeCCCCCC-------C--C-C---------CCeEEEEcc-
Q 036024          204 YGGI-N---APY-VWAHFP---GRKSWDVFAEILEKTHITTVPGSGFG-------P--G-G---------EEYIRISGF-  255 (272)
Q Consensus       204 ~~~~-~---~~~-~~i~l~---~~~~~~~~~~ll~~~gi~v~~g~~~~-------~--~-~---------~~~~R~s~~-  255 (272)
                      ..+. .   .++ ..+.++   +....++...| ++.||.+......-       .  . .         ...+++.+. 
T Consensus       284 ~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~  362 (380)
T TIGR03588       284 LTIPLGSKSAWHLYPILLDQEFGCTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHP  362 (380)
T ss_pred             CCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCC
Confidence            3321 1   222 222333   23455666655 55699886432110       0  0 0         255777753 


Q ss_pred             -CCHHHHHHHHHHHHHhC
Q 036024          256 -GHRESILEASRRLEALF  272 (272)
Q Consensus       256 -~~~~~i~~~l~~l~~~l  272 (272)
                       .+++|++..++.|+++|
T Consensus       363 ~l~~~dv~~i~~~l~~~~  380 (380)
T TIGR03588       363 ALTLEQQQRVVETLRKVL  380 (380)
T ss_pred             CCCHHHHHHHHHHHHHhC
Confidence             48999999999999875

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.46  E-value=6.3e-12  Score=111.02  Aligned_cols=203  Identities=15%  Similarity=0.083  Sum_probs=133.4

Q ss_pred             CCceEEEEec-CCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCS-PNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~-p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++.++++-- .+...|.. .+++.+++|.++|+++|+++|.||++.++...+...........+|.+    +++|.+| 
T Consensus       222 ~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv----~~gK~l~-  296 (460)
T PRK06916        222 EEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIM----TAGKGLT-  296 (460)
T ss_pred             CcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCee----eeehhhh-
Confidence            4566666654 36666765 588889999999999999999999998764444332222333345532    5799998 


Q ss_pred             Cc-cceeEEEecccccccCCcchHHHHH-------hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024          122 TG-VRLGWTVVPEELLFSSGFPVINDFN-------RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILI  193 (272)
Q Consensus       122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  193 (272)
                      .| +.+|.++++++.        .+.+.       ......+++.++++..++.+.++....   +...++.+++.++++
T Consensus       297 gG~~Pi~av~~~~ei--------~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~  365 (460)
T PRK06916        297 GGYLPIAITVTTDEI--------YNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEK---TNLIEQVARKTEYVA  365 (460)
T ss_pred             cCccccceeeecHHH--------HHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHH
Confidence            78 589999999887        33332       122334555788888888888763222   345567777777888


Q ss_pred             HHHHhC---C-C-eEecCCCceEEEeecCCC--------C----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--c
Q 036024          194 DTLASL---G-I-KVYGGINAPYVWAHFPGR--------K----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--G  254 (272)
Q Consensus       194 ~~L~~~---g-~-~~~~~~~~~~~~i~l~~~--------~----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~  254 (272)
                      +.|+++   . + .+.+  .|.++-+.+...        .    ...+...++++ ||.+.+..       +.+|+.  +
T Consensus       366 ~~l~~l~~~~~v~~vrG--~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~g-------~~l~~~Ppl  435 (460)
T PRK06916        366 TQLEDLFALKHVGDIRQ--LGLMVGIELVKNKETKEPFEWTERVGVQVCKRSREL-GMLTRPLG-------NTIVFMPPL  435 (460)
T ss_pred             HHHHHhhcCCCeEEeec--CCceeeEEeecccccccCCCchhhHHHHHHHHHHHC-CeEEEecC-------CEEEEeCCc
Confidence            888765   2 1 1222  355555655311        0    12445555554 99997631       468877  5


Q ss_pred             cCCHHHHHHHHHHHHHhC
Q 036024          255 FGHRESILEASRRLEALF  272 (272)
Q Consensus       255 ~~~~~~i~~~l~~l~~~l  272 (272)
                      ..+++|+++++++|+++|
T Consensus       436 ~it~~~id~~~~~l~~~l  453 (460)
T PRK06916        436 ASTIDELDEMLRILYKAI  453 (460)
T ss_pred             ccCHHHHHHHHHHHHHHH
Confidence            669999999999998764

>PRK02769 histidine decarboxylase; Provisional

Probab=99.45  E-value=1.3e-11  Score=106.25  Aligned_cols=234  Identities=15%  Similarity=0.084  Sum_probs=149.5

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccC-CCC-C-C---CceEEEEecCCCccccCCCHHHHHHHHHHHHHcC---CEEEEc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T-S---RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG---SIIIFD   84 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~-~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~---~~vi~D   84 (272)
                      ....++.+| +.+.++.++++...++ +++ + +   ++.+|+++.++|+||.+-|   +++|+++|+++|   +++++|
T Consensus       123 v~ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVD  199 (380)
T PRK02769        123 VSKIARLLRIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHAD  199 (380)
T ss_pred             HHHHHHHcCCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEE
Confidence            445666778 7778888754333333 222 1 3   3888999999999999976   888999999998   699999


Q ss_pred             ccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHH
Q 036024           85 SAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ  163 (272)
Q Consensus        85 ~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (272)
                      .+++.+..... ..+.....  .+...+..|.+|.+|.| ..+|.++.+++.+..... -.+.+.....+...+-+....
T Consensus       200 aA~gg~~~p~~~~~~~~d~~--~~vDsis~s~HK~~~~P-~g~G~l~~r~~~~~~~~~-~~~yl~~~d~t~~GSR~g~~~  275 (380)
T PRK02769        200 AALSGMILPFVNNPPPFSFA--DGIDSIAISGHKFIGSP-MPCGIVLAKKKYVERISV-DVDYIGSRDQTISGSRNGHTA  275 (380)
T ss_pred             ecccceeecccCccccCCcc--CCCCEEEECCcccCCCC-CCcEEEEEehhhhhhccc-CccccCCCCCCccCCCCcHHH
Confidence            99987544311 11111111  12236777999988733 448998888766322110 011111111111222334445


Q ss_pred             HHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCC
Q 036024          164 AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFG  243 (272)
Q Consensus       164 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~  243 (272)
                      .++...+...+....++..++..+.++++.+.|++.|+++......+.+.+..+.   .++    . + |..+.+.    
T Consensus       276 l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~f~~~~---~~~----~-~-~w~l~~~----  342 (380)
T PRK02769        276 LLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVVFPCPS---ERI----W-K-KWHLATS----  342 (380)
T ss_pred             HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEEEcCCC---HHH----H-h-CeeEccc----
Confidence            5566666655667779999999999999999999999998776667777666553   122    2 3 5555432    


Q ss_pred             CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          244 PGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       244 ~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                         ...+|+.+  ..+++.++++++.|...
T Consensus       343 ---~~~~hi~~~~~~~~~~~~~f~~dl~~~  369 (380)
T PRK02769        343 ---GNQAHIITMPHHNKQQIDSLIDELIFD  369 (380)
T ss_pred             ---CCEEEEEECCCCCHHHHHHHHHHHHHH
Confidence               23788886  34888899999888754

>PRK07483 hypothetical protein; Provisional

Probab=99.45  E-value=1.4e-11  Score=108.32  Aligned_cols=211  Identities=12%  Similarity=0.075  Sum_probs=133.4

Q ss_pred             CCceEEEEecCCC-ccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCSPNN-PTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~p~n-ptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++.+|++-..+. -.| ...+++.+++|.++|++||+++|.||++.++...+...........+|.+    +++|.+| 
T Consensus       198 ~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv----~~gK~l~-  272 (443)
T PRK07483        198 DTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLV----TIAKGLG-  272 (443)
T ss_pred             CceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCee----eehhhhc-
Confidence            3555666654343 234 45677889999999999999999999998775444322222333345533    5799998 


Q ss_pred             Ccc-ceeEEEecccccccCCcchHHHHHh----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH
Q 036024          122 TGV-RLGWTVVPEELLFSSGFPVINDFNR----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL  196 (272)
Q Consensus       122 ~g~-r~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L  196 (272)
                      .|. .+|.++++++.        .+.+..    +...++++.++++..++.+.++....   +...++.+++.++|++.|
T Consensus       273 gG~~Pi~av~~~~~i--------~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~---~~l~~~~~~~g~~l~~~L  341 (443)
T PRK07483        273 AGYQPIGAVLASDRI--------YDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAE---DGLLANVRARGEQLRARL  341 (443)
T ss_pred             cCccccEEEEEcHHH--------HHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHH
Confidence            885 89999998887        343421    12334556788888888888863322   345566666667777776


Q ss_pred             HhC----CC-eEecCCCceEEEeecCCC-------C-----hHHHHHHHHHhcCeEeeCCCCC-CCCCCCeEEEE--ccC
Q 036024          197 ASL----GI-KVYGGINAPYVWAHFPGR-------K-----SWDVFAEILEKTHITTVPGSGF-GPGGEEYIRIS--GFG  256 (272)
Q Consensus       197 ~~~----g~-~~~~~~~~~~~~i~l~~~-------~-----~~~~~~~ll~~~gi~v~~g~~~-~~~~~~~~R~s--~~~  256 (272)
                      +++    +. .-.. ..|.++-+++...       +     ...+...++++ |+.+.+.... .....+.+||.  +..
T Consensus       342 ~~l~~~~~~i~~vR-G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~~~~~~~~~~~~l~~~PpL~i  419 (443)
T PRK07483        342 RERLGQHPHVGDIR-GRGLFVGVELVADRATKAPFDPALKLHARIKREAMAR-GLMVYPMGGTIDGVRGDHVLLAPPFII  419 (443)
T ss_pred             HHHHhcCCCeeeEe-ecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHC-CcEEEecCccccCCCCCEEEEECCCCC
Confidence            543    31 1122 2455666666311       1     12345555555 9999764211 00113579998  567


Q ss_pred             CHHHHHHHHHHHHHhC
Q 036024          257 HRESILEASRRLEALF  272 (272)
Q Consensus       257 ~~~~i~~~l~~l~~~l  272 (272)
                      +++|+++++++|+++|
T Consensus       420 t~~eid~~~~~l~~~l  435 (443)
T PRK07483        420 TAAQIDEIVERLGDAI  435 (443)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            9999999999998864

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.45  E-value=8.1e-12  Score=110.26  Aligned_cols=206  Identities=16%  Similarity=0.117  Sum_probs=128.9

Q ss_pred             CceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.++++-..+.-.|.. .+++.++++.++|++||+++|.||+..++...+...........+|.+    +++|.+| .|
T Consensus       225 ~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDiv----t~gK~l~-gG  299 (459)
T PRK06931        225 KPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDII----VMSKAVG-GG  299 (459)
T ss_pred             ceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEE----Eeccccc-CC
Confidence            45566664345555664 567889999999999999999999999875444322222333345532    5799998 78


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----  199 (272)
                      +.+|.++.+++.         +.+.......+++.++++..++.+.++....   +...++.+++.++|++.|+++    
T Consensus       300 ~Pi~av~~~~~~---------~~~~~~~~~~T~~gnpla~aaala~L~~l~~---~~l~~~~~~~G~~l~~~L~~l~~~~  367 (459)
T PRK06931        300 LPLAVLGIKKEF---------DAWQPGGHTGTFRGNQLAMATGLTTLKILKE---ENLAQNAAERGEWLKAQLAELQKRY  367 (459)
T ss_pred             cceeeeeeHHHH---------hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999987776543         1121223445556888888888888873222   234455566666666666553    


Q ss_pred             CCeEecCCCceEEEeecCCC------------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHH
Q 036024          200 GIKVYGGINAPYVWAHFPGR------------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESIL  262 (272)
Q Consensus       200 g~~~~~~~~~~~~~i~l~~~------------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~  262 (272)
                      ++...--..|.++.+++...            +   ...+...+++ .|+.+.++...    .+.+|+.  +..+++|++
T Consensus       368 ~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~~----~~~l~~~Ppl~it~~eid  442 (459)
T PRK06931        368 PCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFE-NGLLLERGGRN----GNVVRLLPPLLITQAECE  442 (459)
T ss_pred             CCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHH-CCcEEeecCCC----CCEEEEECCCCcCHHHHH
Confidence            32111112466666666311            0   1234444554 49999764321    3568877  456999999


Q ss_pred             HHHHHHHHhC
Q 036024          263 EASRRLEALF  272 (272)
Q Consensus       263 ~~l~~l~~~l  272 (272)
                      +++++|+++|
T Consensus       443 ~~~~~l~~~l  452 (459)
T PRK06931        443 EFIDRFEQAL  452 (459)
T ss_pred             HHHHHHHHHH
Confidence            9999998764

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.44  E-value=4.4e-12  Score=111.38  Aligned_cols=202  Identities=9%  Similarity=0.007  Sum_probs=126.6

Q ss_pred             CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC--CCceEEEecCccccC
Q 036024           44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA--REVAIEISSFSKFSG  120 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g  120 (272)
                      +++.++++-..+...|... +++.+++|.++|++||+++|+||++.++...+........+..  +|.    .+++|.+|
T Consensus       250 ~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi----~t~gK~lg  325 (464)
T TIGR00699       250 KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDM----VTFSKKFQ  325 (464)
T ss_pred             CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCE----EEehhhhc
Confidence            3566666665576778776 6788999999999999999999999876543322122222211  442    46899996


Q ss_pred             CCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 036024          121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG  200 (272)
Q Consensus       121 ~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g  200 (272)
                       .|   |+++..+ .+        .........++++.++++..++.+.++....   +...++.+++.++|++.|+++.
T Consensus       326 -~g---G~~~~~~-~~--------~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~  389 (464)
T TIGR00699       326 -TA---GYFFHDP-AF--------RPNKPYRQFNTWMGDPSRALILREIIQEIKR---KDLLENVAHVGDYLYTGLEDLQ  389 (464)
T ss_pred             -cC---Cccccch-hc--------cCCCCcccccCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH
Confidence             32   4433332 21        1111222344555777877777777763222   3455666666677777776541


Q ss_pred             --Ce-----EecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHH
Q 036024          201 --IK-----VYGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEA  270 (272)
Q Consensus       201 --~~-----~~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~  270 (272)
                        ..     +.+...|.++-++++... ...+...++++ |+.+.+.      +.+.+||.  +..+++|+++++++|++
T Consensus       390 ~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~-Gvl~~~~------g~~~ir~~Ppl~it~~eid~~~~~l~~  462 (464)
T TIGR00699       390 KKYPEFIQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNN-GVNIGGC------GVKAIRLRPMLVFQKHHADIFLEIISK  462 (464)
T ss_pred             HhCCCceeeecccCeEEEEEEecCCHHHHHHHHHHHHHC-CcEEecC------CCCeEEEeCCCCCCHHHHHHHHHHHHH
Confidence              22     222135777778876322 34455555555 9999653      24679998  46699999999999998


Q ss_pred             hC
Q 036024          271 LF  272 (272)
Q Consensus       271 ~l  272 (272)
                      ++
T Consensus       463 ~~  464 (464)
T TIGR00699       463 II  464 (464)
T ss_pred             hC
Confidence            75

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.44  E-value=1.9e-12  Score=109.75  Aligned_cols=227  Identities=17%  Similarity=0.205  Sum_probs=142.4

Q ss_pred             eeEEeecCCCCCcccCCCCC-CCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC-CCCCCcc
Q 036024           24 NIEYLECGPGNNFFPDLKGT-SRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-GCPRSIY  100 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~~-~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~-~~~~~~~  100 (272)
                      .++.+|.++-..++.-+++. +++.+|++- -..|..=+...++.++.|.++|+++++++|.||+...|... +....+.
T Consensus       178 ~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~  257 (432)
T COG0001         178 HTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYY  257 (432)
T ss_pred             cEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccccc
Confidence            45555555332222223333 577777776 33555333556677999999999999999999999876544 2222222


Q ss_pred             ccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHH
Q 036024          101 EIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS  180 (272)
Q Consensus       101 ~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  180 (272)
                      .+  .+|    +.++.|.+| .|+.+|.+.++.+.++.     ........+..+.+.++++..|..+.++.....  +.
T Consensus       258 gi--~PD----lttlGKiIG-GGlP~ga~gGr~eiM~~-----~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~--~~  323 (432)
T COG0001         258 GV--EPD----LTTLGKIIG-GGLPIGAFGGRAEIMEQ-----LAPLGPVYQAGTLSGNPLAMAAGLATLEELMTE--EG  323 (432)
T ss_pred             Cc--Ccc----hhhhhhhhc-CCcceeeeccHHHHHhh-----hCCCCCccccCCCCCcHHHHHHHHHHHHHHHhc--cc
Confidence            22  334    447999999 99999999999988431     223445556677778888888888888732221  12


Q ss_pred             HHHHHHHHHHHHHHHHHh----CCCeEecCC-CceEEEeecC----C-----C----ChHHHHHHHHHhcCeEeeCCCCC
Q 036024          181 VVDYYKENTKILIDTLAS----LGIKVYGGI-NAPYVWAHFP----G-----R----KSWDVFAEILEKTHITTVPGSGF  242 (272)
Q Consensus       181 ~~~~~~~~~~~l~~~L~~----~g~~~~~~~-~~~~~~i~l~----~-----~----~~~~~~~~ll~~~gi~v~~g~~~  242 (272)
                      ..+++.+..+.|++.|++    .|+.+.... +++|...--+    +     .    .-..++..++++ ||++.|+. |
T Consensus       324 ~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps~-~  401 (432)
T COG0001         324 VYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPSQ-F  401 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCcc-c
Confidence            455566666666666655    466554332 3444222211    0     0    123355577777 99998754 2


Q ss_pred             CCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          243 GPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       243 ~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                          +.++ +|...+++++++.+++++++
T Consensus       402 ----ea~f-lS~ahte~di~~~~~a~~~~  425 (432)
T COG0001         402 ----EAGF-LSTAHTEEDIDRTLEAADEA  425 (432)
T ss_pred             ----ccee-eecccCHHHHHHHHHHHHHH
Confidence                2334 77778999999999988765

>PRK12403 putative aminotransferase; Provisional

Probab=99.43  E-value=3.2e-11  Score=106.55  Aligned_cols=204  Identities=12%  Similarity=0.032  Sum_probs=126.8

Q ss_pred             CceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.++++-..+...|.. .+++.+++|.++|++||+++|.||++.++...+.......+...+|  ++  +++|.+| .|
T Consensus       222 ~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PD--iv--~~gK~lg-gG  296 (460)
T PRK12403        222 NVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPD--TL--SIAKGLT-SG  296 (460)
T ss_pred             ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCC--eE--EEccccc-cc
Confidence            44455554446666765 4677799999999999999999999987654443323233333344  22  4899998 78


Q ss_pred             c-ceeEEEecccccccCCcchHHHHHh----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHH-HHHHHHHHHHH
Q 036024          124 V-RLGWTVVPEELLFSSGFPVINDFNR----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYK-ENTKILIDTLA  197 (272)
Q Consensus       124 ~-r~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~L~  197 (272)
                      . .+|.++++++.        .+.+..    +...++++.++++..++.+.++....   +...++.+ ++.+++++.|+
T Consensus       297 ~~Piga~v~~~~i--------~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~---~~l~~~~~~~~g~~l~~~L~  365 (460)
T PRK12403        297 YVPMGGLVLSKRI--------AEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRD---EGVVTRVKDDTGPYLQRCLR  365 (460)
T ss_pred             ccceEEEEECHHH--------HHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH
Confidence            4 89998888776        333321    12334555788888888888873322   22455554 56666666665


Q ss_pred             hC----CCeEecCCCceEEEeecCCC------Ch------HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHH
Q 036024          198 SL----GIKVYGGINAPYVWAHFPGR------KS------WDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRE  259 (272)
Q Consensus       198 ~~----g~~~~~~~~~~~~~i~l~~~------~~------~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~  259 (272)
                      ++    ++...-...|.++.+++...      ..      ..+...++++ |+.+.+..       +.+|++  +..|++
T Consensus       366 ~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~~-------~~~~l~Ppl~it~~  437 (460)
T PRK12403        366 EVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEE-GVIIRSTL-------GRMIMAPALVAGRA  437 (460)
T ss_pred             HHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhC-CEEEEecC-------CEEEEECCCCCCHH
Confidence            43    32211112466666666311      01      1122333444 99996421       357888  455999


Q ss_pred             HHHHHHHHHHHhC
Q 036024          260 SILEASRRLEALF  272 (272)
Q Consensus       260 ~i~~~l~~l~~~l  272 (272)
                      |++++++.|+++|
T Consensus       438 eid~~~~~l~~al  450 (460)
T PRK12403        438 EIDELVDKTRIAV  450 (460)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998864

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.43  E-value=1.7e-11  Score=107.84  Aligned_cols=203  Identities=14%  Similarity=0.124  Sum_probs=124.0

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.++++...+...|.. .+++.+++|.++|++||+++|.||++.++...+.......++..+|.  +  +++|.++ .
T Consensus       224 ~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDi--v--~~gK~l~-~  298 (443)
T PRK08297        224 HDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDI--V--AFGKKTQ-V  298 (443)
T ss_pred             CcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCE--E--Eeccccc-c
Confidence            456666665445555654 67888999999999999999999999876544432222223334453  2  4799885 2


Q ss_pred             ccceeEEEecccccccCCcchHH-HHH-hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 036024          123 GVRLGWTVVPEELLFSSGFPVIN-DFN-RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-  199 (272)
                          |.++..++...     ... .+. .....++++.++++..++.+.++....   ++..++.+++.+++++.|+++ 
T Consensus       299 ----~a~l~~~~i~~-----~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~  366 (443)
T PRK08297        299 ----CGIMAGRRVDE-----VEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEE---DGLVENAARQGEYLLARLEELA  366 (443)
T ss_pred             ----cceecchHHHH-----hhhhhccCccccCCCCCccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH
Confidence                33334433210     010 110 112334555788888888877763222   234555666666666666553 


Q ss_pred             ---C-C--eEecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHH
Q 036024          200 ---G-I--KVYGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEA  270 (272)
Q Consensus       200 ---g-~--~~~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~  270 (272)
                         + +  .+.+  .|.++.+.++... ...+...+++ +||.+.|+.      ...+||+  +..+++|+++++++|++
T Consensus       367 ~~~~~~~~~vrg--~G~~~~i~~~~~~~~~~~~~~l~~-~Gvl~~~~~------~~~lr~~P~l~~t~~eid~~l~~l~~  437 (443)
T PRK08297        367 AEFPAVVSNVRG--RGLMCAFDLPTTADRDEVIRRLWE-EGVLVLPCG------ERSIRFRPALTVTTEEIDAAIDALRR  437 (443)
T ss_pred             HHCCCcceeeec--cceEEEEEecCHHHHHHHHHHHHH-CCEEEecCC------CCeEEEECCccCCHHHHHHHHHHHHH
Confidence               2 2  2233  4777778886422 2355666664 599997643      3568885  56799999999999987


Q ss_pred             hC
Q 036024          271 LF  272 (272)
Q Consensus       271 ~l  272 (272)
                      ++
T Consensus       438 ~l  439 (443)
T PRK08297        438 AL  439 (443)
T ss_pred             HH
Confidence            64

>PRK06148 hypothetical protein; Provisional

Probab=99.42  E-value=1.6e-11  Score=117.63  Aligned_cols=205  Identities=17%  Similarity=0.128  Sum_probs=134.0

Q ss_pred             CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCC
Q 036024           45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++.++++-..+.-.|. ..+++.++++.++|+++|+++|.||++.++...|. ..........+|.    -+++|.+| .
T Consensus       784 ~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDi----vt~gK~lg-g  858 (1013)
T PRK06148        784 GPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDI----VTMGKPIG-N  858 (1013)
T ss_pred             ceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcce----eeeccccc-C
Confidence            4555655544444454 55778899999999999999999999987754442 2222223334453    36799998 8


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhh-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRI-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--  199 (272)
                      |+.+|.++++++.        .+.+..- ...++++.++++..|+.+.++....   +...++.+++.++|++.|+++  
T Consensus       859 G~Plgav~~~~ei--------~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~  927 (1013)
T PRK06148        859 GHPMGAVVTTREI--------ADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED---EDLQRNALEIGNYLLAGLRELQD  927 (1013)
T ss_pred             CcceEEEEEcHHH--------HhhccCCCccccCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998877        3333221 1235556888888888888873322   345566777777777777664  


Q ss_pred             --CC--eEecCCCceEEEeecCCC-----C----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHH
Q 036024          200 --GI--KVYGGINAPYVWAHFPGR-----K----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEA  264 (272)
Q Consensus       200 --g~--~~~~~~~~~~~~i~l~~~-----~----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~  264 (272)
                        ++  .+.+  .|.++-+++...     .    ...+...+++ +||.+.+....    .+.+||.  +..++++++++
T Consensus       928 ~~~~i~~VrG--~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~g~~----~~vlr~~Ppl~it~~~id~~ 1000 (1013)
T PRK06148        928 RFDIIGDVRG--MGLFLGIELVTDRKTKAPATAIARYVKNGARE-RGILIGTEGPH----DNVLKIRPPLIFSRADADHL 1000 (1013)
T ss_pred             hCCCceEEee--eceEEEEEecCCccccCccHHHHHHHHHHHHh-CCeEEeccCCC----CCEEEEeCCccCCHHHHHHH
Confidence              32  2222  466666766421     1    1234555555 59999764211    3678888  45699999999


Q ss_pred             HHHHHHhC
Q 036024          265 SRRLEALF  272 (272)
Q Consensus       265 l~~l~~~l  272 (272)
                      +++|+++|
T Consensus      1001 l~~l~~~l 1008 (1013)
T PRK06148       1001 LEVLDDVL 1008 (1013)
T ss_pred             HHHHHHHH
Confidence            99998764

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.41  E-value=2.7e-11  Score=103.09  Aligned_cols=180  Identities=20%  Similarity=0.281  Sum_probs=117.5

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD   93 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~   93 (272)
                      +...++++| ++.++....+....-.+.. +++|+|++-+|.|||-.+.+   +.+|+++|+++++.+|+|+.+....+.
T Consensus       119 ~~~~l~~~gi~~~~~d~~~~~~~~~~~~~-~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q  194 (396)
T COG0626         119 FEKILQKFGVEVTFVDPGDDEALEAAIKE-PNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQ  194 (396)
T ss_pred             HHHHHHhcCeEEEEECCCChHHHHHHhcc-cCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCccccccc
Confidence            456667788 8887776544222212222 68999999999999988865   999999999999999999999853222


Q ss_pred             CCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhh-hccCCcchHHHHHHHHhcc
Q 036024           94 GCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIIC-TCFNGASNIAQAGGLACLS  171 (272)
Q Consensus        94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~  171 (272)
                      .   + ..+..  |  |++.|.+|.+| ....=.|.++++++..       .+.+..... ......++..     +++.
T Consensus       195 ~---P-L~~Ga--D--IVvhSaTKyl~GHsDvl~G~v~~~~~~~-------~~~~~~~~~~~~G~~l~p~d-----A~l~  254 (396)
T COG0626         195 R---P-LELGA--D--IVVHSATKYLGGHSDVLGGVVLTPNEEL-------YELLFFAQRANTGAVLSPFD-----AWLL  254 (396)
T ss_pred             C---h-hhcCC--C--EEEEeccccccCCcceeeeEEecChHHH-------HHHHHHHHHhhcCCCCCHHH-----HHHH
Confidence            1   1 22221  2  99999999886 4455567666666662       333322222 1222233332     2333


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eEecCC----------------CceEEEeecCC
Q 036024          172 SEGLEAVHSVVDYYKENTKILIDTLASL-GI-KVYGGI----------------NAPYVWAHFPG  218 (272)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~----------------~~~~~~i~l~~  218 (272)
                      ..+.+.+.-+.++..+++..+.+.|++. .+ +++.|.                .|..+.+.+.+
T Consensus       255 lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~  319 (396)
T COG0626         255 LRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN  319 (396)
T ss_pred             HhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence            3444566778899999999999999986 33 233332                45677888875

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.41  E-value=7.8e-12  Score=101.12  Aligned_cols=206  Identities=15%  Similarity=0.134  Sum_probs=146.0

Q ss_pred             CCceEEEEecCCCccccCCCH-HHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQ-NQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~-~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++.+++++---+..-|++.|+ ..+++..++|.+||+++|.||++.++...|.......-...+|  +++  +.|+++-.
T Consensus       206 ~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PD--ivi--lgKalSGG  281 (427)
T KOG1402|consen  206 PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPD--IVI--LGKALSGG  281 (427)
T ss_pred             CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCC--eEE--EeccccCC
Confidence            555566555558888987665 4589999999999999999999998877765333322222344  333  67888733


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK  202 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~  202 (272)
                      =..++.++++++.        ...+......++++.++++..++.+.++-..+   +.+.++.++.-+.|+..|..+.-+
T Consensus       282 ~~Pvsavl~~~~i--------m~~~~pgeHgsTyggNpLg~~vaiAalevi~e---ekL~era~~lG~~l~~~L~~l~~~  350 (427)
T KOG1402|consen  282 VYPVSAVLADDDI--------MLNIKPGEHGSTYGGNPLGCAVAIAALEVIVE---EKLVERAAKLGEILRDQLNKLQKK  350 (427)
T ss_pred             eeeeEEEEecHHH--------HhccCCCccccccCCChHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcccc
Confidence            3457777888877        44566666777888999999999888874333   667777788888899999887322


Q ss_pred             ------EecCCCceEEEeecC-----CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHH
Q 036024          203 ------VYGGINAPYVWAHFP-----GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLE  269 (272)
Q Consensus       203 ------~~~~~~~~~~~i~l~-----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~  269 (272)
                            .... .|+++.+.+.     +.+.-+.+..+ ++.|+...|-+      .+.+||+  +..+++|+++.++.++
T Consensus       351 ~p~~v~~VRG-rGl~~ai~i~~~~~~~~~aw~~cl~l-k~~g~LAkptH------~~IiRfaPPL~I~e~dl~eg~e~i~  422 (427)
T KOG1402|consen  351 FPHVVKEVRG-RGLLNAIVINPSKTSGQDAWDVCLAL-KENGLLAKPTH------GNIIRFAPPLVISEEDLREGIEAIE  422 (427)
T ss_pred             ccchhheeec-cceEEEEEeccccccchhHHHHHHcc-cccccccCCCC------CCeEEecCCcccCHHHHHHHHHHHH
Confidence                  2332 5777777664     22334444444 55598887755      5689999  5679999999999998


Q ss_pred             HhC
Q 036024          270 ALF  272 (272)
Q Consensus       270 ~~l  272 (272)
                      +.+
T Consensus       423 k~i  425 (427)
T KOG1402|consen  423 KTI  425 (427)
T ss_pred             HHh
Confidence            764

>PRK06149 hypothetical protein; Provisional

Probab=99.41  E-value=1.8e-11  Score=117.14  Aligned_cols=206  Identities=16%  Similarity=0.112  Sum_probs=132.6

Q ss_pred             CceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCC
Q 036024           45 RTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        45 ~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++.++++-..+...| ...+++.+++|.++|++||+++|.||++.++...|. ..........+|.  +  +++|.+| .
T Consensus       744 ~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDi--v--t~gK~lg-~  818 (972)
T PRK06149        744 GLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDI--I--TMAKGMG-N  818 (972)
T ss_pred             ceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCE--E--Eeccccc-C
Confidence            444555543344444 556778899999999999999999999977644332 1122223333442  2  7899998 8


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhh-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRI-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--  199 (272)
                      |..+|+++++++.        .+.+... ...++.+.++++..|+.+.++....   +...++.+++-++|++.|+++  
T Consensus       819 G~Pl~av~~~~~i--------~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~  887 (972)
T PRK06149        819 GHPLGAVITRREI--------AEALEAEGYFFSSTGGSPVSCRIGMAVLDVLRE---EKLQENARRVGDHLKARLEALAD  887 (972)
T ss_pred             CeeeEEEEEcHHH--------HhhhccCCcccCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999887        3333321 1123345788888888888863322   345566666667777777664  


Q ss_pred             --CC-eEecCCCceEEEeecCC------CC---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHH
Q 036024          200 --GI-KVYGGINAPYVWAHFPG------RK---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEAS  265 (272)
Q Consensus       200 --g~-~~~~~~~~~~~~i~l~~------~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l  265 (272)
                        ++ .... ..|.++-+++..      ..   ...+...++++ ||.+.+..   . ..+.+||.  +..+++++++++
T Consensus       888 ~~~~i~~vr-G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~-Gvl~~~~g---~-~~~vl~~~Ppl~it~~~id~~~  961 (972)
T PRK06149        888 RHPLIGAVH-GMGLYLGVELVRDRQTLEPATEETAAICDRLLEL-GVIMQPTG---D-HLNILKIKPPLCLDRESADFFV  961 (972)
T ss_pred             hCCCeEEEe-ecceEEEEEEecCcccCCCChHHHHHHHHHHHhC-CeEEeecC---C-CCCEEEEECCCcCCHHHHHHHH
Confidence              32 2222 246677777631      11   23455566655 99997642   1 13678987  467999999999


Q ss_pred             HHHHHhC
Q 036024          266 RRLEALF  272 (272)
Q Consensus       266 ~~l~~~l  272 (272)
                      ++|+++|
T Consensus       962 ~~l~~~l  968 (972)
T PRK06149        962 DMLDRVL  968 (972)
T ss_pred             HHHHHHH
Confidence            9998864

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.40  E-value=5.8e-11  Score=102.27  Aligned_cols=190  Identities=15%  Similarity=0.141  Sum_probs=117.9

Q ss_pred             Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc--CCEEEEcccCCccccCC
Q 036024           18 EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN--GSIIIFDSAYAAYVTDG   94 (272)
Q Consensus        18 ~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~--~~~vi~D~~~~~~~~~~   94 (272)
                      .+++.| ++..++......+.--++  +++|+|++.+|.||||.+.+   +++|+++|+++  ++++++|.++....   
T Consensus       121 ~l~~~Gi~v~~vd~~d~~~l~~~l~--~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~---  192 (395)
T PRK08114        121 ILSKLGVTTTWFDPLIGADIAKLIQ--PNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGV---  192 (395)
T ss_pred             HHHhcCcEEEEECCCCHHHHHHhcC--CCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCcccc---
Confidence            356788 888887542222221122  67999999999999999977   99999999998  49999999997421   


Q ss_pred             CCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc
Q 036024           95 CPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE  173 (272)
Q Consensus        95 ~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~  173 (272)
                       ...+..+..+    +++.|.+|.++ .+..-.|.++.+++.        .+.+...........++..     +++...
T Consensus       193 -~~~pl~~GaD----ivv~S~tKyl~Ghsdv~~G~v~~~~~~--------~~~l~~~~~~~G~~~~p~~-----a~l~~r  254 (395)
T PRK08114        193 -LFKALDFGID----ISIQAGTKYLVGHSDAMIGTAVANARC--------WEQLRENSYLMGQMVDADT-----AYMTSR  254 (395)
T ss_pred             -ccCHHHcCCc----EEEEcCcccccCCCcceeEEEEcCHHH--------HHHHHHHHHhccCCCCHHH-----HHHHHc
Confidence             1222333222    99999999775 344567866665544        3333322222222233332     233334


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhCC-C-eEecC----------------CCceEEEeecCCCChHHHHHHHHHhcC
Q 036024          174 GLEAVHSVVDYYKENTKILIDTLASLG-I-KVYGG----------------INAPYVWAHFPGRKSWDVFAEILEKTH  233 (272)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~----------------~~~~~~~i~l~~~~~~~~~~~ll~~~g  233 (272)
                      +.+.+.-+.++..+++..+.+.|+++. + +++.|                ..|..+.+.+++..+.+...++++.-.
T Consensus       255 gl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~  332 (395)
T PRK08114        255 GLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFS  332 (395)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCC
Confidence            445567788999999999999999872 2 22221                235567778864212344445555433

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.40  E-value=4.8e-11  Score=104.79  Aligned_cols=204  Identities=13%  Similarity=0.091  Sum_probs=121.3

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.++++...+...|.. .+++.+++|.++|++||+++|+||++.++...|...........+|.  +  +++|.+. .
T Consensus       217 ~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi--~--~~gK~~~-~  291 (431)
T TIGR03251       217 HDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDI--V--AFGKKTQ-V  291 (431)
T ss_pred             CcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCE--E--EecccCc-c
Confidence            466777776556666765 57788999999999999999999999976554432222233334453  2  4788862 2


Q ss_pred             ccceeEEEecccccccCCcchHH-HHH-hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 036024          123 GVRLGWTVVPEELLFSSGFPVIN-DFN-RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-  199 (272)
                      +   |++.. ++...     +.. .+. .....++++.++++..++.+.++....   +...++.+++.+++++.|+++ 
T Consensus       292 ~---g~~~~-~~i~~-----~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~  359 (431)
T TIGR03251       292 C---GIMAG-RRVDE-----VADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEE---ERLVDNARVQGAHLLARLHELA  359 (431)
T ss_pred             c---eEEec-chHHH-----hhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH
Confidence            2   55543 32200     011 010 011233455777888877777763222   123344555555555555442 


Q ss_pred             ---C-CeEecCCCceEEEeecCCCC-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHh
Q 036024          200 ---G-IKVYGGINAPYVWAHFPGRK-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEAL  271 (272)
Q Consensus       200 ---g-~~~~~~~~~~~~~i~l~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~  271 (272)
                         + +.......|.++.+.++... ...+...++ ++||.+.|..      ...+|++  +..+++|+++++++|+++
T Consensus       360 ~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~-~~Gvl~~~~g------~~~lr~~P~l~~t~~eid~~l~~l~~~  431 (431)
T TIGR03251       360 AEFPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLY-REGVLLLGCG------ERSIRFRPPLTVTREEIDAAIDAIRRV  431 (431)
T ss_pred             HhCccceecccccceeEEEEeCCHHHHHHHHHHHH-hCCeEEecCC------CCeEEEECCccCCHHHHHHHHHHHHhC
Confidence               2 22211224677778886432 234555665 4599997642      3568887  567999999999999763

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.39  E-value=2.4e-11  Score=102.68  Aligned_cols=143  Identities=16%  Similarity=0.172  Sum_probs=96.1

Q ss_pred             HHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVT   92 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~   92 (272)
                      ..++.-| +++++|++.++-..++ ++.  .++|+++.+++.+|.+|+++|   +++|+++|+++++.+++|.+++-   
T Consensus       149 ~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav---  222 (428)
T KOG1549|consen  149 RALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV---  222 (428)
T ss_pred             HHHHhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc---
Confidence            4556677 9999999844323333 222  389999999999999999998   99999999999999999999985   


Q ss_pred             CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc--cc-cCCcchHHHHHhhhhhccCCcchHHHHHHHHh
Q 036024           93 DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL--LF-SSGFPVINDFNRIICTCFNGASNIAQAGGLAC  169 (272)
Q Consensus        93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  169 (272)
                      +..+..+.++..+    ++..|.+|.+|+||  +|++.+++..  +. .+....-.+.+.+...+-.++.......+.++
T Consensus       223 G~i~vDV~eln~D----~~s~s~HK~ygp~~--iGaLYvr~~~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~  296 (428)
T KOG1549|consen  223 GKIPVDVQELNAD----FLSISAHKIYGPPG--IGALYVRRKRPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEF  296 (428)
T ss_pred             CCccccHHHcCch----heeeecccccCCCc--ceEEEEccCCCcccccCcccCCccccccccCCcCchhhhhhHHHHHH
Confidence            3334455555432    77788999999999  9999998622  11 11111112334444444444444555545555


Q ss_pred             cc
Q 036024          170 LS  171 (272)
Q Consensus       170 l~  171 (272)
                      +.
T Consensus       297 ~~  298 (428)
T KOG1549|consen  297 VN  298 (428)
T ss_pred             HH
Confidence            54

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.39  E-value=1.1e-10  Score=97.12  Aligned_cols=229  Identities=17%  Similarity=0.172  Sum_probs=152.1

Q ss_pred             eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024           24 NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP   96 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~   96 (272)
                      +.++++++.+ ...+|.++      ..+||+|+.=...+|--     -+.+++.++|++.|+++++|.+|. +++.++..
T Consensus       140 ~~v~Y~vd~e-t~~IDyD~~~k~a~e~kPK~ii~G~SaY~r~-----id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~  213 (413)
T COG0112         140 NVVSYGVDPE-TGLIDYDEVEKLAKEVKPKLIIAGGSAYSRP-----IDFKRFREIADEVGAYLMVDMAHVAGLIAGGVH  213 (413)
T ss_pred             EeEecccccc-cCccCHHHHHHHHHHhCCCEEEECccccccc-----cCHHHHHHHHHHhCceEEehHHHHHHHHhcccC
Confidence            7788899866 44445333      37899998854444432     238999999999999999999996 56666654


Q ss_pred             CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHH-hcccccH
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLA-CLSSEGL  175 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~l~~~~~  175 (272)
                      ++.....   +  ++.+|-+|++  +|-|-|.+.++++.+       .+.+.+...+...+.+.....|+.+ ++.+-..
T Consensus       214 p~P~~~A---d--vVTtTTHKTl--rGPrGG~Il~~~eel-------~kkin~aVFPg~qggpl~HviAakaVa~~Eal~  279 (413)
T COG0112         214 PNPLPHA---D--VVTTTTHKTL--RGPRGGIILTNDEEL-------AKKINSAVFPGLQGGPLMHVIAAKAVAFKEALE  279 (413)
T ss_pred             CCCCCcc---c--eEeCCcccCC--CCCCceEEEeccHHH-------HHHhhhhcCCccCCChHHHHHHHHHHHHHHHcC
Confidence            4333321   2  8999999998  566778888886332       5667665544444333333332222 2222222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCC-CC---CCCCCe
Q 036024          176 EAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSG-FG---PGGEEY  249 (272)
Q Consensus       176 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~-~~---~~~~~~  249 (272)
                      -..++..+++-+|++.|.+.|.+.|+++... -+...+.+++.. ..+....+.+|++.||.++--.- |.   +-.+..
T Consensus       280 p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSG  359 (413)
T COG0112         280 PEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSG  359 (413)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCcc
Confidence            3447888999999999999999999998763 235567788872 23456678888999999853222 22   233678


Q ss_pred             EEEEc------cCCHHHHHHHHHHHHHhC
Q 036024          250 IRISG------FGHRESILEASRRLEALF  272 (272)
Q Consensus       250 ~R~s~------~~~~~~i~~~l~~l~~~l  272 (272)
                      +|++.      .-.++|+.+.-+.|.++|
T Consensus       360 IRiGtpa~TtrG~~e~e~~~Ia~~I~~vl  388 (413)
T COG0112         360 IRIGTPAVTTRGFGEAEMEEIADLIADVL  388 (413)
T ss_pred             ceeccHHHhhcCCCHHHHHHHHHHHHHHH
Confidence            99994      114678888777776653

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.38  E-value=7.1e-11  Score=101.10  Aligned_cols=195  Identities=14%  Similarity=0.141  Sum_probs=125.7

Q ss_pred             CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++...+...|... +++.++++.++|++||+++|+||++.++ ..+...........+|.+    +++|.+| .
T Consensus       161 ~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv----~~gK~lg-g  234 (364)
T PRK04013        161 KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIV----TMGKGIG-N  234 (364)
T ss_pred             CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEE----Eeccccc-C
Confidence            4677777776666666644 5677999999999999999999999977 444433333333344522    5699998 7


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK  202 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~  202 (272)
                      |+.+|.++.+.+..        .    ....++++.++++..|+.+.++....+   ...++.++.   +. .+...-+.
T Consensus       235 G~P~~a~~~~~~~~--------~----~~~~~T~~gnp~~~aaa~a~l~~i~~~---~l~~~~~~~---l~-~l~~~~v~  295 (364)
T PRK04013        235 GVPVSLTLTNFDVE--------R----GKHGSTFGGNPLACKAVAVTLRILRRE---RLVEKAGEK---FI-EIKGERVV  295 (364)
T ss_pred             CceeEEEEeccccc--------C----CCcCCCCCcCHHHHHHHHHHHHHHHhc---cHHHHHHHH---HH-HhccCcce
Confidence            89999988876651        1    124456668888888888888733331   122222221   21 22211111


Q ss_pred             EecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          203 VYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       203 ~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                      -.. ..|.++-+++.. ....+...++++ |+.+.+.      +.+.+||.  +..+++|+++++++|++++
T Consensus       296 ~vR-G~Gl~~gve~~~-~~~~i~~~~~~~-Gll~~~~------g~~vlr~~Ppl~it~~~i~~~~~~l~~~l  358 (364)
T PRK04013        296 TTR-GRGLMIGIVLKK-PVGKYVEELQNR-GYLVHTA------GQRVIRLLPPLIISKDTMEEAKSAIEGVI  358 (364)
T ss_pred             eee-eCcEEEEEEeCC-cHHHHHHHHHhC-CcEEeeC------CCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence            122 246777777753 234555555554 9998653      24679998  4569999999999998764

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.38  E-value=7.5e-11  Score=100.04  Aligned_cols=242  Identities=17%  Similarity=0.144  Sum_probs=160.6

Q ss_pred             cccccCccc-chHHhcccceeEEeecCCCCCc--ccC---CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            6 SVIVGQAGD-LEDEVGKYCNIEYLECGPGNNF--FPD---LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~--~~d---l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      ++..+.|+. +...++++|++..+...+..++  .++   ++..++.+.+.+++.+..||+.++        ++.+.+++
T Consensus        98 ~~~tG~fg~r~~~ea~~~g~v~~~~~~~~~~~~~~p~~~~~~~~~d~~~v~~t~NETstGv~~~--------~~~~~~~~  169 (364)
T PRK12462         98 YVTTGYWSRKAIGEASRVAAMRVVWDGAASGYRTLPSLAELDWDARAPFRHYVSNETVEGLQFP--------DAAGLPDS  169 (364)
T ss_pred             EEeCCHHHHHHHHHHHhcCCceEecCcCCCCCCcCCCHHHhccCCCCcEEEEccCCCCceEecC--------cccccCCC
Confidence            355666666 7778888885544442222222  333   222357889999999999999986        22333689


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCC---cchHHHHHhhh--hhc
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG---FPVINDFNRII--CTC  154 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~---~~~~~~~~~~~--~~~  154 (272)
                      ++|+|.+-..   ...+..+..+    |  ++..+..|++|.||  ++.++.+++.+....   +.+.+ +....  ..+
T Consensus       170 llvvD~sS~~---~s~pid~~~~----d--vi~agsQKnlgP~G--ltvvivs~~al~~~~~~~p~~ld-y~~~~~~~s~  237 (364)
T PRK12462        170 PLIADMSSDF---MSRPFDVEAY----G--MVYAHAQKNLGPAG--VTVAIIRRALLERVPDTLPPMLD-FRTHVEHRSN  237 (364)
T ss_pred             eEEEEcCchh---hCCCCChHHc----c--EEEeeccccCCCCc--eEEEEECHHHHhhccccCCchhh-HHHHHhcCCC
Confidence            9999999764   2223444444    1  77778899999888  677888887754322   22222 22222  234


Q ss_pred             cCCcchHHHHHHHHhcccccHH--HHHHHHHHHHHHHHHHHHHHHhCC-CeEec----CCCceEEEeecCCCChHHHHHH
Q 036024          155 FNGASNIAQAGGLACLSSEGLE--AVHSVVDYYKENTKILIDTLASLG-IKVYG----GINAPYVWAHFPGRKSWDVFAE  227 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~----~~~~~~~~i~l~~~~~~~~~~~  227 (272)
                      .++++....+++...++....+  .++.+.++.+++++.+++.+.... +....    ..+-+.+.+.+++..-++.+..
T Consensus       238 ~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~~l~~~f~~  317 (364)
T PRK12462        238 YNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQPRLDTLFKE  317 (364)
T ss_pred             CCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCHHHHHHHHH
Confidence            5578899999888888755444  789999999999999999999883 44332    1234556677765444455555


Q ss_pred             HHHhcCeEeeCCCCCCCCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024          228 ILEKTHITTVPGSGFGPGGEEYIRISGFG--HRESILEASRRLEAL  271 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~--~~~~i~~~l~~l~~~  271 (272)
                      .++++|+.-..|+.-    -+.+|.|+++  +.|.++.+++-++++
T Consensus       318 ~a~~~gl~~lkGhr~----vgg~Ras~yna~~~e~v~~L~~fm~~f  359 (364)
T PRK12462        318 QSTEAGFCGLSGHRS----IGGIRASLYNAVSEQAVSRLCAFLKDF  359 (364)
T ss_pred             HHHHCCCccccCCcc----cCceEEEcCCCCCHHHHHHHHHHHHHH
Confidence            567779988766522    4669999866  788888888877654

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.37  E-value=1.2e-10  Score=101.89  Aligned_cols=162  Identities=19%  Similarity=0.222  Sum_probs=98.3

Q ss_pred             Hhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024           18 EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD   93 (272)
Q Consensus        18 ~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~   93 (272)
                      .+.+.| +++.++ +.+   .++ +++  .+++++|++.+|+||+|.+.+   +++|.++|+++|+++|+|+++..... 
T Consensus       128 ~l~~~Gi~v~~vd-d~~---d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~-  199 (436)
T PRK07812        128 TLPKLGIEVSFVE-DPD---DLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL-  199 (436)
T ss_pred             HhhcCeEEEEEEC-CCC---CHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-
Confidence            345677 777774 222   122 222  268899999999999999987   89999999999999999999864111 


Q ss_pred             CCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccccccc-CC----------------------cchHHHHH-h
Q 036024           94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFS-SG----------------------FPVINDFN-R  149 (272)
Q Consensus        94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~-~~----------------------~~~~~~~~-~  149 (272)
                        ..++ .+.  .|  +++.|++|.+|..|--+|.+++.+..+.- ..                      +.++.... .
T Consensus       200 --~~pl-~~G--aD--ivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (436)
T PRK07812        200 --IRPL-EHG--AD--IVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQ  272 (436)
T ss_pred             --CCch-hcC--CC--EEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHH
Confidence              1122 221  12  77899999998777667776664322100 00                      00000111 0


Q ss_pred             hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      .........++.  .   +++...+.+.+..+.++..+++..+.+.|+++
T Consensus       273 ~~~~~G~~l~p~--~---a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~  317 (436)
T PRK07812        273 LLRDLGSAISPF--N---AFLIAQGLETLSLRIERHVANAQRVAEFLEAR  317 (436)
T ss_pred             HHHhcCCCCCHH--H---HHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhC
Confidence            111112222222  1   22222344556778889999999999999987

>PRK07046 aminotransferase; Validated

Probab=99.37  E-value=7.1e-11  Score=104.06  Aligned_cols=201  Identities=13%  Similarity=0.048  Sum_probs=123.1

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      .++.+|++--.+...|.. .+++.++++.++|+++|+++|.||++. +..+... ....+...+|.+    +++|.+| .
T Consensus       217 ~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg-~~~~~gv~PDi~----t~gK~lg-g  289 (453)
T PRK07046        217 GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGG-YTRAHGLEPDFL----VVGKPIA-G  289 (453)
T ss_pred             CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcc-hhHHhCCCccce----eehhhhc-C
Confidence            455556654334444544 455779999999999999999999987 3222111 112223234422    5899998 8


Q ss_pred             ccceeEEEecccccccCCcchHHHHHh---------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNR---------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILI  193 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  193 (272)
                      |+.+|.++++++.        .+.+..         ....++++.++++..|+.+.++....   ++..++.+++.++++
T Consensus       290 G~Pi~av~g~~~i--------~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~---~~~~~~~~~~g~~l~  358 (453)
T PRK07046        290 GVPCAVYGFSAEL--------AERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMT---EAAYAHMLALAARLA  358 (453)
T ss_pred             CCcceeeeehHHH--------HHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHH
Confidence            9999999998887        444431         11233555788888888888763222   224455555555555


Q ss_pred             HHHHh----CCC--eEecCCCceEEEeecC-C-C----------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEE
Q 036024          194 DTLAS----LGI--KVYGGINAPYVWAHFP-G-R----------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRI  252 (272)
Q Consensus       194 ~~L~~----~g~--~~~~~~~~~~~~i~l~-~-~----------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~  252 (272)
                      +.|++    .++  .+.+. +. .+.+.+. + .          +   ...+...++++ ||.+.|.       .+.+++
T Consensus       359 ~~L~~l~~~~~~~~~v~g~-G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~-------~~~~~~  428 (453)
T PRK07046        359 AGLRAVIARHGLPWHVTRV-GA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNR-GVLITPF-------HNMMLV  428 (453)
T ss_pred             HHHHHHHHhCCCCeEEEEe-Cc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHC-CCEEecc-------cCcEEE
Confidence            55554    443  33442 33 3334331 1 0          1   12344555565 9998752       235788


Q ss_pred             EccCCHHHHHHHHHHHHHhC
Q 036024          253 SGFGHRESILEASRRLEALF  272 (272)
Q Consensus       253 s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +...+++|++++++++++++
T Consensus       429 ~p~~t~~did~~~~~~~~~l  448 (453)
T PRK07046        429 CPATTAADVDRLVAAFDACL  448 (453)
T ss_pred             eCCCCHHHHHHHHHHHHHHH
Confidence            87779999999999998764

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.37  E-value=1.4e-10  Score=108.20  Aligned_cols=245  Identities=11%  Similarity=0.028  Sum_probs=150.9

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccC-CCC-C----CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccC
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAY   87 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~   87 (272)
                      ....++..| +++.++.+.++..+++ +++ .    .++++|++++|+| +|..-  +++++|+++|+++|..+++|.++
T Consensus       591 nPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e--~~I~eI~~iah~~G~~v~VDgAq  667 (939)
T TIGR00461       591 NPASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFE--PTIQHACDIVHSFGGQVYLDGAN  667 (939)
T ss_pred             CHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceec--ccHHHHHHHHHHcCCEEEEEecC
Confidence            445577789 9999999755444443 222 1    4888999999999 78763  23999999999999999999998


Q ss_pred             CccccCCCCCCccccCCCCCceEEEecCccccCC----CccceeEEEecccccccCCcchH-HHH------Hhh-hhhcc
Q 036024           88 AAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF----TGVRLGWTVVPEELLFSSGFPVI-NDF------NRI-ICTCF  155 (272)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~r~G~~~~~~~~~~~~~~~~~-~~~------~~~-~~~~~  155 (272)
                      ......  ......+.    --++.+|.+|.|+.    .|--+|.+.+.+.+....--+.. ...      ... .....
T Consensus       668 ~~al~~--l~~Pg~~G----aDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~  741 (939)
T TIGR00461       668 MNAQVG--LTSPGDLG----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAA  741 (939)
T ss_pred             hhhCCC--CCCccccC----CCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCcccccccccc
Confidence            541111  11122222    12889999997652    34447999888765321100000 000      000 01111


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC-CceE---EEeecC------CCChHHHH
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-NAPY---VWAHFP------GRKSWDVF  225 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~---~~i~l~------~~~~~~~~  225 (272)
                      .+.+.....++...+..-+.+.+++..+..-.+++++.+.|.+ ++++..+. .+.+   +.++++      +....++.
T Consensus       742 ~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIa  820 (939)
T TIGR00461       742 PYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVA  820 (939)
T ss_pred             ccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHH
Confidence            1222222333444455556677888889999999999999988 55554432 2221   445555      35677888


Q ss_pred             HHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          226 AEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      ++|++. |+..-. ..|...+.-.+|.+-..+++|+|++++++.++
T Consensus       821 krL~d~-G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I  864 (939)
T TIGR00461       821 KRLQDY-GFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAI  864 (939)
T ss_pred             HHHHhC-Ceeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHH
Confidence            888777 987533 33332233345556667899999999988653

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.36  E-value=3e-11  Score=103.78  Aligned_cols=190  Identities=19%  Similarity=0.294  Sum_probs=113.8

Q ss_pred             HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC-CEEEEcccCCccccCC
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG-SIIIFDSAYAAYVTDG   94 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~-~~vi~D~~~~~~~~~~   94 (272)
                      ..+...| ++..++......+.--++  +++++|++-+|.||+..+.+   +++|+++|+++| +++++|+.+...... 
T Consensus       113 ~~l~~~gv~v~~~d~~d~~~l~~~l~--~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~~-  186 (386)
T PF01053_consen  113 ELLPRFGVEVTFVDPTDLEALEAALR--PNTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYNQ-  186 (386)
T ss_dssp             HCHHHTTSEEEEESTTSHHHHHHHHC--TTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC-
T ss_pred             hhhcccCcEEEEeCchhHHHHHhhcc--ccceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceeee-
Confidence            3455677 777776643222221122  58999999999999988755   999999999998 999999999752111 


Q ss_pred             CCCCccccCCCCCceEEEecCccccC-CCccceeEEEecc--cccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcc
Q 036024           95 CPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPE--ELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLS  171 (272)
Q Consensus        95 ~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  171 (272)
                        .+ ..+..  |  +++.|++|.++ ....-.|.+++++  ++        .+.+...........++....     +.
T Consensus       187 --~p-L~~Ga--D--ivv~S~TKyl~Ghsdv~~G~vv~~~~~~~--------~~~l~~~~~~~G~~~~p~da~-----ll  246 (386)
T PF01053_consen  187 --NP-LELGA--D--IVVHSATKYLSGHSDVMGGAVVVNGSSEL--------YDRLREFRRLLGATLSPFDAW-----LL  246 (386)
T ss_dssp             ---G-GGGT---S--EEEEETTTTTTTSSSE-EEEEEESSHHHH--------HHHHHHHHHHHT-B--HHHHH-----HH
T ss_pred             --cc-CcCCc--e--EEEeeccccccCCcceeeEEEEECchhhh--------hhhhcchhhhcCccchHHHHH-----HH
Confidence              12 22221  2  99999999885 4444467777765  33        444544443333323332222     22


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecC----------------CCceEEEeecCCCChHHHHHHHHHhcC
Q 036024          172 SEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGG----------------INAPYVWAHFPGRKSWDVFAEILEKTH  233 (272)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~i~l~~~~~~~~~~~ll~~~g  233 (272)
                      ..+.+.+.-+.++..+++..+.+.|+++ .+. +..|                ..|..+.+.+++..  +...++++.-.
T Consensus       247 ~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~--~~~~~f~~~l~  324 (386)
T PF01053_consen  247 LRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGE--EAARRFLDALK  324 (386)
T ss_dssp             HHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHH--HHHHHHHHH-S
T ss_pred             hcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccch--hhhHhHHhhhh
Confidence            2334556778899999999999999997 332 3322                23447888887532  33444444444


Q ss_pred             e
Q 036024          234 I  234 (272)
Q Consensus       234 i  234 (272)
                      +
T Consensus       325 l  325 (386)
T PF01053_consen  325 L  325 (386)
T ss_dssp             S
T ss_pred             h
Confidence            3

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.35  E-value=2e-10  Score=98.87  Aligned_cols=188  Identities=18%  Similarity=0.217  Sum_probs=114.4

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD   93 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~   93 (272)
                      +...+...| +++.++.++...+.++.   +++|+|++.+|.|||+.+.+   +++|+++|++++  +++|.++... +.
T Consensus       120 ~~~~~~~~Gi~v~fvd~~~~~~~~l~~---~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~-~~  190 (384)
T PRK06434        120 FNKVLKTLGIHVDYIDTDRLNSLDFDP---SNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASP-YN  190 (384)
T ss_pred             HHHHHHhcCcEEEEECCCChhheeecC---CCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCc-cc
Confidence            335667788 99999987644555442   36899999999999998855   999999999998  4679997421 11


Q ss_pred             CCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccc
Q 036024           94 GCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS  172 (272)
Q Consensus        94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  172 (272)
                        ..++ ....  |  +++.|.+|.++.+| .-.|.++++++.+       .+.+...........+..  .   +++..
T Consensus       191 --~~pl-~~ga--D--ivv~S~tK~i~G~~d~~gG~vv~~~~~~-------~~~~~~~~~~~G~~~~~~--~---A~l~~  251 (384)
T PRK06434        191 --QNPL-DLGA--D--VVIHSATKYISGHSDVVMGVAGTNNKSI-------FNNLVERRKTLGSNPDPI--Q---AYLAL  251 (384)
T ss_pred             --CCch-hcCC--C--EEEeecccccCCCCCceEEEEecCcHHH-------HHHHHHHHHhcCCCCCHH--H---HHHHH
Confidence              1222 2222  2  88999999996433 3356666655432       333333322222222322  2   12222


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eEecC----------CCceEEEeecCCCChHHHHHHHHHhcC
Q 036024          173 EGLEAVHSVVDYYKENTKILIDTLASL-GI-KVYGG----------INAPYVWAHFPGRKSWDVFAEILEKTH  233 (272)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~----------~~~~~~~i~l~~~~~~~~~~~ll~~~g  233 (272)
                      .+.+.+..+.++.++++..+.+.|+.+ .+ ++..|          ..|..+.+.+++   .+...++++.-.
T Consensus       252 ~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~---~~~~~~f~~~l~  321 (384)
T PRK06434        252 RGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS---MEDVHKFIRNLE  321 (384)
T ss_pred             hCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC---HHHHHHHHHhCC
Confidence            233445777888899999999999987 23 23222          235567788864   233444444433

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.33  E-value=1.5e-10  Score=101.47  Aligned_cols=100  Identities=18%  Similarity=0.294  Sum_probs=72.3

Q ss_pred             hcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCC
Q 036024           19 VGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR   97 (272)
Q Consensus        19 ~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~   97 (272)
                      +.+.| +++.++.+....+.--+  .+++|+|++.+|+||||.+.+   +++|+++|+++|+++|+|.++.....   ..
T Consensus       124 l~~~Gi~v~~vd~~d~~~l~~~i--~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~---~~  195 (433)
T PRK08134        124 LRRFGIETTFVKPGDIDGWRAAI--RPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL---LR  195 (433)
T ss_pred             HhhCCeEEEEECCCCHHHHHHhc--CCCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc---CC
Confidence            45678 88888875111111112  278999999999999999987   89999999999999999999864221   12


Q ss_pred             CccccCCCCCceEEEecCccccCCCccceeEEEe
Q 036024           98 SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV  131 (272)
Q Consensus        98 ~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~  131 (272)
                      ++ .+..    -+++.|.+|.+|.+|-.+|.+++
T Consensus       196 pl-~~Ga----D~vv~S~tK~l~g~g~~~gG~v~  224 (433)
T PRK08134        196 PF-EHGA----DLVYHSATKFLGGHGTAIGGVLV  224 (433)
T ss_pred             ch-hcCC----CEEEeccccccCCCCCceEEEEE
Confidence            22 2322    28899999999877776777655

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.32  E-value=1.4e-10  Score=100.06  Aligned_cols=212  Identities=12%  Similarity=0.101  Sum_probs=132.3

Q ss_pred             CceEEEEecCCC-ccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc-c-cc----C--CCCCCc----cccCCCCCceEE
Q 036024           45 RTDIIFFCSPNN-PTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA-Y-VT----D--GCPRSI----YEIPGAREVAIE  111 (272)
Q Consensus        45 ~~~~i~~~~p~n-ptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~-~-~~----~--~~~~~~----~~~~~~~~~~i~  111 (272)
                      +++++.+.+++| ..|+.+|.++++++.++|++||+.+++|.++.. - .+    .  -...++    .++....|  .+
T Consensus       170 ~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD--~~  247 (450)
T TIGR02618       170 KIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD--GC  247 (450)
T ss_pred             ccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc--EE
Confidence            455788888877 458999999999999999999999999999874 1 11    0  112344    22222223  57


Q ss_pred             EecCccccCCC-ccceeEEEecccccccCCcchHHHHHhhhhh--ccC---CcchHHHHHHHHhcccccHHHHHHHHHHH
Q 036024          112 ISSFSKFSGFT-GVRLGWTVVPEELLFSSGFPVINDFNRIICT--CFN---GASNIAQAGGLACLSSEGLEAVHSVVDYY  185 (272)
Q Consensus       112 ~~s~sK~~g~~-g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  185 (272)
                      ..|..|..+.| |   |+++.+++.+       .++.+.....  ...   +.+.....|+...+.+...   ....++-
T Consensus       248 ~~S~~Kd~~~~~G---G~l~~~d~~l-------~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r  314 (450)
T TIGR02618       248 TMSGKKDCLVNIG---GFLCMNDDEM-------FQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHR  314 (450)
T ss_pred             EEeeccCCCCCCc---eEEEeCCHHH-------HHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhh---HHHHHHH
Confidence            88999998866 5   7777555553       4444433211  111   1122233333333432221   1233444


Q ss_pred             HHHHHHHHHHHHhCCCeEecCCCceEEEeecC---------CCChHHHHHHHHHhcCeEeeCCCCCC----CCC------
Q 036024          186 KENTKILIDTLASLGIKVYGGINAPYVWAHFP---------GRKSWDVFAEILEKTHITTVPGSGFG----PGG------  246 (272)
Q Consensus       186 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~---------~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~------  246 (272)
                      .++.++|.+.|.+.|+.+..|.+|..++++..         .-....+..+|..+.||.-.--..+.    +.+      
T Consensus       315 ~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~  394 (450)
T TIGR02618       315 VKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRP  394 (450)
T ss_pred             HHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCC
Confidence            45688999999999999987888999999753         12455677788888888754322221    111      


Q ss_pred             -CCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          247 -EEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       247 -~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                       -..+|+++-   -|.++++...+++..+
T Consensus       395 ~~el~rlaiprr~yt~~h~~~v~~~~~~~  423 (450)
T TIGR02618       395 KLELVRLTIPRRVYTYAHMDVVADGIIKL  423 (450)
T ss_pred             ccceeeeccccccccHhHHHHHHHHHHHH
Confidence             257999972   2777888777777653

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.31  E-value=2.6e-10  Score=105.89  Aligned_cols=240  Identities=14%  Similarity=0.125  Sum_probs=141.5

Q ss_pred             HHhcccc-eeEEeecCCCCCcccC-CCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPD-LKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA   89 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~   89 (272)
                      ..+...| +++.++.++++...++ +++.     +++.++++++|++-++.   .+++++|+++|+++|+.+++|.++..
T Consensus       606 asa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~Galv~vDgA~~~  682 (954)
T PRK12566        606 ASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVY---EEGIREICEVVHQHGGQVYMDGANLN  682 (954)
T ss_pred             HHHHHCCCEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCcee---cchHHHHHHHHHHcCCEEEEEeeChh
Confidence            4466778 9999999865433333 2221     46666777777765543   36699999999999999999999863


Q ss_pred             cccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccc---cccC-CcchHHHHHhhh-hhccCCcch
Q 036024           90 YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEEL---LFSS-GFPVINDFNRII-CTCFNGASN  160 (272)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~---~~~~-~~~~~~~~~~~~-~~~~~~~~~  160 (272)
                       ...+ ...+..+..+    ++.++.+|+|+.|    |.-+|.+.+.+.+   +... .........+.. .....+.+.
T Consensus       683 -a~~~-l~~Pg~~GAD----i~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa  756 (954)
T PRK12566        683 -AQVG-LARPADIGAD----VSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSA  756 (954)
T ss_pred             -hccC-CCChhhcCCC----EEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchH
Confidence             1111 1112333322    8999999988633    3335655555522   1100 000000000011 111112222


Q ss_pred             HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCce---EEEeec---C---CCChHHHHHHHHH
Q 036024          161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAP---YVWAHF---P---GRKSWDVFAEILE  230 (272)
Q Consensus       161 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---~~~i~l---~---~~~~~~~~~~ll~  230 (272)
                      ....++...+..-+.+ +++.......+++++.+.|.+. ++.+.++ .+.   -+.+.+   +   +.+..++..+|+ 
T Consensus       757 ~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~-~~~~~hEfii~~~~l~~~~g~~~~dvakRL~-  833 (954)
T PRK12566        757 SILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLYRGR-NERVAHECILDLRPLKAQTGISEEDVAKRLM-  833 (954)
T ss_pred             HHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCC-CCCeeeEEEEEccccccccCCCHHHHHHHHH-
Confidence            2234445555555555 6777777788999999999873 4444222 222   122333   2   245577888888 


Q ss_pred             hcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          231 KTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       231 ~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      ++||.... ..| +. .+.+|++.  +.+++|+|+++++|+++
T Consensus       834 d~Gihapt-~~f-Pv-~~~LmIepTE~eskeEIDrf~eAL~~I  873 (954)
T PRK12566        834 DYGFHAPT-MSF-PV-PGTLMVEPTESESKAELDRFVEAMLSI  873 (954)
T ss_pred             HCCcEEeE-Eee-cc-CCEEEEEeeeeCCHHHHHHHHHHHHHH
Confidence            66998643 333 43 77899995  67999999999998765

>PLN02880 tyrosine decarboxylase

Probab=99.30  E-value=3.2e-10  Score=100.77  Aligned_cols=248  Identities=14%  Similarity=0.004  Sum_probs=148.4

Q ss_pred             chHHhcccc----eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024           15 LEDEVGKYC----NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus        15 ~~~~~~~~g----~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      ....+.-+|    .++.+|.+.++++..|++.+           ..+-+|+-+-...+||.+-|   +++|+++|+++|+
T Consensus       194 v~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~~i  270 (490)
T PLN02880        194 LQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSNGM  270 (490)
T ss_pred             HHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHcCC
Confidence            345555566    37899998655666664432           12334555577999999966   9999999999999


Q ss_pred             EEEEcccCCccccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEeccccc-ccCCcchHHHHHhhh------
Q 036024           80 IIIFDSAYAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL-FSSGFPVINDFNRII------  151 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~-~~~~~~~~~~~~~~~------  151 (272)
                      ++.+|.+|+++...- ....  .+.+...--.+..+++|.++ ...-+|.+..++... ...+..-.+.+....      
T Consensus       271 wlHVDaA~gg~~~~~~~~~~--~l~gie~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~  347 (490)
T PLN02880        271 WFHVDAAYAGSACICPEYRH--YIDGVEEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSV  347 (490)
T ss_pred             EEEEehhhHHHHHhCHHHHH--HhcCchhcCEEEECchhhcC-CCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCC
Confidence            999999999754321 1110  11221111266778999886 556789888875321 000000000110000      


Q ss_pred             -hhccCC---cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC--Ch---
Q 036024          152 -CTCFNG---ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR--KS---  221 (272)
Q Consensus       152 -~~~~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~--~~---  221 (272)
                       .....+   +.......+...++..+.+.+.++.++.-+.++++.+.+++. ++++..+.....+.+++++.  +.   
T Consensus       348 ~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~  427 (490)
T PLN02880        348 VDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNG  427 (490)
T ss_pred             CChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhH
Confidence             000000   000001112222444556666777777779999999999876 89988876666777777531  11   


Q ss_pred             ----HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC---CHHHHHHHHHHHHHh
Q 036024          222 ----WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG---HRESILEASRRLEAL  271 (272)
Q Consensus       222 ----~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~---~~~~i~~~l~~l~~~  271 (272)
                          ..+..+|.++..+.+.+..   -.+..++|+++.+   ++++++.+++.|+++
T Consensus       428 ~~~n~~l~~~l~~~g~~~v~~t~---~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~  481 (490)
T PLN02880        428 NKLNHDLLDAVNSSGKIFISHTV---LSGKYVLRFAVGAPLTEERHVTAAWKVLQDE  481 (490)
T ss_pred             HHHHHHHHHHHHhCCCEEEEEEE---ECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence                3456666666677775433   2346799999633   678999999988764

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.30  E-value=3.5e-10  Score=105.30  Aligned_cols=207  Identities=14%  Similarity=0.115  Sum_probs=134.2

Q ss_pred             CceEEEEecC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           45 RTDIIFFCSP-NNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        45 ~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++.++++--. +.-.|+.+ +++.+++|.++|++||+++|.||++.+|...|.......+...+|.+    +++|.++ .
T Consensus       584 ~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi----~~gKgLt-g  658 (817)
T PLN02974        584 HIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIA----CYAKLLT-G  658 (817)
T ss_pred             CEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEE----eeccccc-C
Confidence            4555555432 67778875 67779999999999999999999999886666544444444455533    5899998 8


Q ss_pred             c-cceeEEEecccccccCCcchHHHHH------hhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHH
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFN------RIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILID  194 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~  194 (272)
                      | +.+|.++++++..        +.+.      .+....+++.++++..|+.+.++.... +..+...+..++..+++.+
T Consensus       659 G~~Plaa~l~~~~I~--------~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~  730 (817)
T PLN02974        659 GLVPLAATLATEEVF--------EAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDE  730 (817)
T ss_pred             CCCccEEEEEcHHHH--------HhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence            8 6899999998883        3332      223456777889999888888873222 2223344444444444444


Q ss_pred             HH----HhCC-CeEecCCCceEEEeecCCCC---------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCH
Q 036024          195 TL----ASLG-IKVYGGINAPYVWAHFPGRK---------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHR  258 (272)
Q Consensus       195 ~L----~~~g-~~~~~~~~~~~~~i~l~~~~---------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~  258 (272)
                      .|    .++. +.-.. .-|.+..+++....         ...+...++.+.||.++|..       +.+|+.  +..++
T Consensus       731 ~l~~~l~~~p~V~~VR-g~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-------nvi~l~pP~~i~~  802 (817)
T PLN02974        731 ELVRAISSLPNVERVV-SLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG-------NVVYLMCGPTTSP  802 (817)
T ss_pred             HHHHHHhhCCCeeEEE-eeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC-------CEEEEeCCCCCCH
Confidence            44    3332 21122 24667777774211         12344555525699998732       467875  46799


Q ss_pred             HHHHHHHHHHHHhC
Q 036024          259 ESILEASRRLEALF  272 (272)
Q Consensus       259 ~~i~~~l~~l~~~l  272 (272)
                      ++++++++.+.+.|
T Consensus       803 e~l~~~~~~l~~~~  816 (817)
T PLN02974        803 ETCTRLLRKVYRRL  816 (817)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998764

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.29  E-value=3.7e-11  Score=91.71  Aligned_cols=120  Identities=17%  Similarity=0.123  Sum_probs=84.3

Q ss_pred             cccccccC-cccch-HHhcccc-eeEEeecCCCCCcccC---C---CCCCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQ-AGDLE-DEVGKYC-NIEYLECGPGNNFFPD---L---KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~-~~~~~-~~~~~~g-~~~~~~~~~~~~~~~d---l---~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.+++..+ ++... ..+...| +++.++.+.+.....+   +   ...++++++++++++||+|...+   .++|.++|
T Consensus        42 ~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~  118 (170)
T cd01494          42 DEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIA  118 (170)
T ss_pred             CEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHH
Confidence            34455443 33444 6667778 9999988765443332   1   12378899999999999999987   58889999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEec
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP  132 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~  132 (272)
                      +++|+++|+|++|..+......   .... ..+..+++.|++|.+|.  .++|+++++
T Consensus       119 ~~~~~~li~D~a~~~~~~~~~~---~~~~-~~~~d~~~~s~~K~~~~--~~~G~l~~~  170 (170)
T cd01494         119 KEYGILLLVDAASAGGASPAPG---VLIP-EGGADVVTFSLHKNLGG--EGGGVVIVK  170 (170)
T ss_pred             HHcCCEEEEecccccccccccc---cccc-cccCCEEEEEcccccCC--CceEEEEeC
Confidence            9999999999999976655322   1111 12234888999999984  568998753

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.28  E-value=9e-10  Score=104.25  Aligned_cols=238  Identities=14%  Similarity=0.098  Sum_probs=145.9

Q ss_pred             ccccccc-Ccccch----HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVG-QAGDLE----DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~-~~~~~~----~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |+|++.. .+|...    ..++..| +++.++.+.+      ++ ..++..+++.+| |.+|.+.+   +++|+++|+++
T Consensus       166 ~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d------~~-~~~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~  234 (954)
T PRK05367        166 NRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA------LD-HDDVFGVLLQYP-GTSGEVRD---YTALIAAAHAR  234 (954)
T ss_pred             CEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC------CC-cccEEEEEEecC-CCCeeecc---HHHHHHHHHHc
Confidence            4555544 344433    4456788 9999987542      11 135545555565 68999965   99999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccc-----cCCCccceeEEEecccccccCCcchHHH------
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKF-----SGFTGVRLGWTVVPEELLFSSGFPVIND------  146 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-----~g~~g~r~G~~~~~~~~~~~~~~~~~~~------  146 (272)
                      |+++++|-...-+..   ..++.++..+    |+++|..|.     +|-||  .|++.+++++.+..-.++...      
T Consensus       235 Gal~~vda~~~Al~~---l~~pge~GaD----i~vgs~qkfg~P~g~GGP~--aGflavr~~~~r~lpgrivG~s~d~~g  305 (954)
T PRK05367        235 GALVAVAADLLALTL---LTPPGEMGAD----IAVGSAQRFGVPMGFGGPH--AAYFAVRDAYKRSMPGRIVGVSVDAAG  305 (954)
T ss_pred             CCEEEEEehhhhccC---CCChhhcCCC----EEEeeCcccCCCCCCCCCC--EEEEEECHHHHhhCCCCeeeeecccCC
Confidence            999999875422111   2233444322    899999997     55455  899999887753322222210      


Q ss_pred             ---HH----------hhhhhccCCcchHHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceE
Q 036024          147 ---FN----------RIICTCFNGASNIAQAGGLACL--SSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPY  211 (272)
Q Consensus       147 ---~~----------~~~~~~~~~~~~~~~~a~~~~l--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~  211 (272)
                         +.          ++...+++-+...+..++.+.+  ...+...+++..++...++.++.+.|++.|+++..+.....
T Consensus       306 ~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~f~~  385 (954)
T PRK05367        306 NPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSFFDT  385 (954)
T ss_pred             CcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCCe
Confidence               00          1111111111111122222221  11233567888999999999999999888888765433334


Q ss_pred             EEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024          212 VWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE  269 (272)
Q Consensus       212 ~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~  269 (272)
                      +.+.++ .+..++.++|+++ ||.+..   .   ..+.+|+|+  .+|++|++++++.|.
T Consensus       386 ~~~~~~-~~~~~i~~~l~~~-gi~~~~---~---~~~~l~is~~e~~t~~did~l~~~l~  437 (954)
T PRK05367        386 LTVEVG-GDAAAVLARALAA-GINLRR---V---DDDHVGISLDETTTREDLAALLAVFG  437 (954)
T ss_pred             EEEeCC-CCHHHHHHHHHHC-Cceecc---c---cCCEEEEEecccCCHHHHHHHHHHHc
Confidence            555554 3566777777666 998832   1   145799996  568999999999985

>PLN03032 serine decarboxylase; Provisional

Probab=99.27  E-value=1.1e-09  Score=93.79  Aligned_cols=242  Identities=13%  Similarity=0.061  Sum_probs=148.4

Q ss_pred             cccccCccc--chHHhcccc-eeEEeecCCCCCcccC-CCCC--C---CceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            6 SVIVGQAGD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKGT--S---RTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         6 ~~~~~~~~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~--~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      +++.+...+  ....++.+| +++.+|.+.++.+.++ +++.  +   ++.+++++..+|+||.+-|   +++|+++|++
T Consensus       113 ~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~  189 (374)
T PLN03032        113 ILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKE  189 (374)
T ss_pred             EEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHH
Confidence            344454444  445666677 8888898766544444 3221  2   4667888889999999955   8899999999


Q ss_pred             cC-----CEEEEcccCCccccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024           77 NG-----SIIIFDSAYAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI  150 (272)
Q Consensus        77 ~~-----~~vi~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~  150 (272)
                      ++     +++.+|.+++.+...- ...+.....  .....+.-|.+|.+|.| ..+|.++..++.+... ..-...+.. 
T Consensus       190 ~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~--~~vDSis~s~HK~~g~P-~g~G~ll~r~~~~~~~-~~~~~Yl~~-  264 (374)
T PLN03032        190 LGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR--KPIGSVSVSGHKFLGCP-MPCGVALTRKKHVKAL-SQNVEYLNS-  264 (374)
T ss_pred             hCCCCCCeeEEEEccchhhhhhccCCCcccCCC--cCCcEEEECcccccCCC-cCeEEEEEEchhhHhh-ccCCcccCC-
Confidence            86     5899999997643221 001111111  11225566889988833 4489988887663210 000111111 


Q ss_pred             hhhccC-CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHH
Q 036024          151 ICTCFN-GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEIL  229 (272)
Q Consensus       151 ~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll  229 (272)
                      ...+.. +=+.....++...+...+.+.+.++.++..++++++.+.|++.++.+......+.+.+..+.  ...    + 
T Consensus       265 ~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~~V~f~~~~--~~~----~-  337 (374)
T PLN03032        265 RDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNELSSTVVFERPM--DEA----F-  337 (374)
T ss_pred             CCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCCceEEEEcCCC--cHh----H-
Confidence            111111 11222333344455556667889999999999999999999998887665566666666552  111    2 


Q ss_pred             HhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHH
Q 036024          230 EKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEA  270 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~  270 (272)
                      .+ |..+.+ .      ...+|+.+.  .+++.+++++..|++
T Consensus       338 ~~-~w~l~~-~------~~~~hi~vm~~~~~~~id~fi~dl~~  372 (374)
T PLN03032        338 IK-KWQLAC-E------GDIAHVVVMPNVTVEKLDEFVEELVE  372 (374)
T ss_pred             hh-eeeecc-c------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence            23 555542 1      247888863  478899999998875

>PLN02590 probable tyrosine decarboxylase

Probab=99.25  E-value=6.6e-10  Score=99.16  Aligned_cols=248  Identities=13%  Similarity=0.015  Sum_probs=148.7

Q ss_pred             chHHhcccc----eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024           15 LEDEVGKYC----NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus        15 ~~~~~~~~g----~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      ....+.-+|    +++.+|.+.++++..|++.+           ..+-+|+-+-...+||.+   +++++|+++|++|++
T Consensus       242 v~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai---Dpl~~Ia~i~~~~g~  318 (539)
T PLN02590        242 FRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV---DPLVPLGNIAKKYGI  318 (539)
T ss_pred             HHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCC
Confidence            334555544    48889998655666664442           123344555678899988   669999999999999


Q ss_pred             EEEEcccCCccccC-CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHHHh--------
Q 036024           80 IIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNR--------  149 (272)
Q Consensus        80 ~vi~D~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~--------  149 (272)
                      ++.+|.+|+++..- +....+  +.+.+.---+.-.++|.+. ...-+|.+++.+.. +...+..-.+.+..        
T Consensus       319 WlHVDaA~GG~al~~~~~r~~--~~Gie~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~  395 (539)
T PLN02590        319 WLHVDAAYAGNACICPEYRKF--IDGIENADSFNMNAHKWLF-ANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTV  395 (539)
T ss_pred             eEEEecchhhhhhcChhhHHH--hcCCccCCEEEECchhhcC-cCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccC
Confidence            99999999975532 211111  1122111134447899886 55678888887642 11111000111110        


Q ss_pred             --hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC--CC----
Q 036024          150 --IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG--RK----  220 (272)
Q Consensus       150 --~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~--~~----  220 (272)
                        ....+...+-......+...++..+.+.+.++.++.-+.+++|.+.+++. ++++..+..-..+.+++.+  .+    
T Consensus       396 ~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~  475 (539)
T PLN02590        396 VNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQC  475 (539)
T ss_pred             CCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHHH
Confidence              00000110111222223344444556788999999999999999999887 7998876666666666642  11    


Q ss_pred             ---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC---CHHHHHHHHHHHHHh
Q 036024          221 ---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG---HRESILEASRRLEAL  271 (272)
Q Consensus       221 ---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~---~~~~i~~~l~~l~~~  271 (272)
                         ..++.+++.+...+.+.+..   -.+..++|+++.+   ++++++++++.|.+.
T Consensus       476 ~~ln~~l~~~l~~~G~~~vs~t~---~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~  529 (539)
T PLN02590        476 NERNRELLAAVNSTGKIFISHTA---LSGKFVLRFAVGAPLTEEKHVTEAWQIIQKH  529 (539)
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeE---ECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence               12455555555444444322   2446789999743   788999999998764

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=99.24  E-value=3.3e-10  Score=93.82  Aligned_cols=201  Identities=17%  Similarity=0.142  Sum_probs=136.5

Q ss_pred             ceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcc
Q 036024           46 TDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV  124 (272)
Q Consensus        46 ~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~  124 (272)
                      +.+++.-.-+.-.|.+ +++..+++..++|+++|.++|.||+..++...|......+.+..+|.+    |++|.+| .|.
T Consensus       213 vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIv----TmAKgiG-nG~  287 (442)
T KOG1404|consen  213 VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIV----TMAKGIG-NGF  287 (442)
T ss_pred             eeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHH----HHHhhcc-CCC
Confidence            3444444556666654 556679999999999999999999999887666444444444445544    8999999 889


Q ss_pred             ceeEEEecccccccCCcchHHHHHhhh-hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--CC
Q 036024          125 RLGWTVVPEELLFSSGFPVINDFNRII-CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GI  201 (272)
Q Consensus       125 r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~  201 (272)
                      .+|.++..++.        .+-+.... ...+.+.++++..+..++++-..+   +.+.+..++...+|.+.|.++  ..
T Consensus       288 Pl~AVvtt~EI--------a~v~~~~~~~fnTyggnP~a~avg~aVL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h  356 (442)
T KOG1404|consen  288 PLGAVVTTPEI--------ADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKE---ENLQENAAEVGSYLLEKLAALKDKH  356 (442)
T ss_pred             cceeeecCHHH--------HHHHHhccccccccCCCchhHHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcC
Confidence            99999999988        44444444 556667888888888888874333   555666777778888888876  33


Q ss_pred             eEecC--CCceEEEeecCC----------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHH
Q 036024          202 KVYGG--INAPYVWAHFPG----------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRR  267 (272)
Q Consensus       202 ~~~~~--~~~~~~~i~l~~----------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~  267 (272)
                      .+.+.  .-|.++-+++-.          .....+.++ ++++|+.+.-|..++    ..+|++  ++.|+||++-+...
T Consensus       357 ~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~-cke~Gvlvg~g~i~G----~vfriaPPlciT~edi~f~~~~  431 (442)
T KOG1404|consen  357 PIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQ-CKELGVLVGKGGIHG----NVFRIAPPLCITKEDIDFAVEY  431 (442)
T ss_pred             CceeecccceeEEEEEEecccCCCCCcchHHHHHHHHH-HHHhCeeeecccccc----eEEEecCCeeccHHHHHHHHHH
Confidence            33332  135555555421          112234444 456699996666443    389999  57799998655553

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.24  E-value=3.4e-09  Score=91.80  Aligned_cols=213  Identities=13%  Similarity=0.138  Sum_probs=133.3

Q ss_pred             CceEEEEecCCCcc-ccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc----cc---CC-CCCCcc----ccCCCCCceEE
Q 036024           45 RTDIIFFCSPNNPT-GHAATQNQLEQLVEFARNNGSIIIFDSAYAAY----VT---DG-CPRSIY----EIPGAREVAIE  111 (272)
Q Consensus        45 ~~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~----~~---~~-~~~~~~----~~~~~~~~~i~  111 (272)
                      +++++.+.+++|.. |+.+|.++++++.++|++||+.+++|.++...    .-   .+ ...++.    ++....|  ..
T Consensus       177 ~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD--~~  254 (460)
T PRK13237        177 NIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYAD--GC  254 (460)
T ss_pred             ccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCc--EE
Confidence            45567778888887 79999999999999999999999999998732    10   00 112322    1111222  66


Q ss_pred             EecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh---h--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHH
Q 036024          112 ISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC---T--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYK  186 (272)
Q Consensus       112 ~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  186 (272)
                      ..|++|.++.+-  -|+++.+++.+       .++++...-   .  +..+.+.--..|++.-+.+...   ....++--
T Consensus       255 t~S~~K~~~~~~--GG~i~t~D~eL-------~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~---~~y~~~ri  322 (460)
T PRK13237        255 TMSGKKDCLVNI--GGFLAMNDEEL-------FDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQ---YEYIEHRV  322 (460)
T ss_pred             EEeCCCCCCCCC--ceEEEECCHHH-------HHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhch---HHHHHHHH
Confidence            778999997551  38888877663       445544421   1  1112222233333333432222   13334444


Q ss_pred             HHHHHHHHHHHhCCCeEecCCCceEEEeecC---------CCChHHHHHHHHHhcCeEeeCCCCC--C--CCC-------
Q 036024          187 ENTKILIDTLASLGIKVYGGINAPYVWAHFP---------GRKSWDVFAEILEKTHITTVPGSGF--G--PGG-------  246 (272)
Q Consensus       187 ~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~---------~~~~~~~~~~ll~~~gi~v~~g~~~--~--~~~-------  246 (272)
                      ++.++|.+.|.+.|+.+..|.+|..++++..         .-....+..+|..+.||...--..+  +  +.+       
T Consensus       323 ~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~  402 (460)
T PRK13237        323 GQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPK  402 (460)
T ss_pred             HHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCc
Confidence            5678999999999999998888988888642         2245667788888888876422222  1  111       


Q ss_pred             CCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          247 EEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       247 ~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                      -..+|+++-   -|.++++...+++..+
T Consensus       403 ~el~rlaiprr~yt~~h~~~v~~~~~~~  430 (460)
T PRK13237        403 LELVRLTIPRRVYTYAHMDVVADSVIKL  430 (460)
T ss_pred             cceeeeccccccccHHHHHHHHHHHHHH
Confidence            257999972   2777888777776543

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.23  E-value=8.6e-10  Score=94.79  Aligned_cols=210  Identities=14%  Similarity=0.055  Sum_probs=136.4

Q ss_pred             CceEEEEecC--CCccccCCCHH-HHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           45 RTDIIFFCSP--NNPTGHAATQN-QLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        45 ~~~~i~~~~p--~nptG~~~~~~-~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +.-+-++.-|  +..+|+.+++. .++++.++|++||+++|.||+-.+|...|....-......+|.+    +++|.++-
T Consensus       213 ~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~----~~aKGLT~  288 (449)
T COG0161         213 ETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDIL----CLAKGLTG  288 (449)
T ss_pred             ccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCee----eecccccc
Confidence            3334444445  54478776655 48999999999999999999999887766544444444455643    57888863


Q ss_pred             CccceeEEEecccccccCCcchHHH-HHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-C
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVIND-FNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-L  199 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~  199 (272)
                      .=+.+|.++++++.....    .+. ...+....+++.++++..|+++.++....   +...++.++...++.+.|.. +
T Consensus       289 GY~Pl~a~l~~~~I~~~~----~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~---e~l~~~~~~~~~~l~~~L~~~l  361 (449)
T COG0161         289 GYLPLSAVLTSDRIYEAF----SDGDAGAFMHGHTYSGNPLACAAALANLDILEE---EDLLERVAEIGAYLQAGLQAAL  361 (449)
T ss_pred             cchhhHhHhhhHHHHHHH----hcccCCeeccCCccccCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHhc
Confidence            445577777777773211    111 23345667777899998888888874333   44556667777777777776 2


Q ss_pred             -CCeEecC--CCceEEEeecCC-CC--------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHH
Q 036024          200 -GIKVYGG--INAPYVWAHFPG-RK--------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEAS  265 (272)
Q Consensus       200 -g~~~~~~--~~~~~~~i~l~~-~~--------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l  265 (272)
                       +-...+.  .-|.+..+++.. ..        ....+...+.+.|+.++|..       ..+=++  +..|++|+++++
T Consensus       362 ~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g-------~~i~~~PPliit~~eid~l~  434 (449)
T COG0161         362 ADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLG-------DVIYLMPPLIITREEIDELV  434 (449)
T ss_pred             ccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecC-------CEEEEcCCccCCHHHHHHHH
Confidence             2222221  246777777752 11        13344455555599999862       244455  467999999999


Q ss_pred             HHHHHhC
Q 036024          266 RRLEALF  272 (272)
Q Consensus       266 ~~l~~~l  272 (272)
                      +++++++
T Consensus       435 ~~l~~al  441 (449)
T COG0161         435 DALREAL  441 (449)
T ss_pred             HHHHHHH
Confidence            9998764

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.23  E-value=4.6e-10  Score=98.64  Aligned_cols=202  Identities=16%  Similarity=0.193  Sum_probs=115.4

Q ss_pred             CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccc-cCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYE-IPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.+|++ -|  -.|...+.+.+++|.++|++|++++|+||++.++...  ...... +...+|    +.+++|.+| .|
T Consensus       187 ~~aavi~-Ep--v~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~--~~g~~~~~gv~PD----i~t~gK~lg-gG  256 (431)
T PRK06209        187 RIACVIL-EP--ATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWH--MRGAQKLYGIVPD----LSCFGKALG-NG  256 (431)
T ss_pred             CEEEEEE-cc--ccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcC--cchhhHHhCCCcc----eeeehhhhc-CC
Confidence            3444444 34  2344677889999999999999999999999765322  111222 222333    357899998 78


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh----C
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS----L  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~  199 (272)
                      +.+|+++++++............-..+...++.+++++...++.+.++....   +...++.+++.+++++.|++    +
T Consensus       257 ~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~~~~~~  333 (431)
T PRK06209        257 FAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRD---EDVIERLHEQGAKLAAGVNEAAAEH  333 (431)
T ss_pred             cccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            8899999988773210000000000111234444666777777777663222   22455666666666666654    4


Q ss_pred             CCe--EecCCCceEEEeec--C--CCChH----HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHH
Q 036024          200 GIK--VYGGINAPYVWAHF--P--GRKSW----DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLE  269 (272)
Q Consensus       200 g~~--~~~~~~~~~~~i~l--~--~~~~~----~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~  269 (272)
                      ++.  +.+ .+.++....+  .  +....    .+..+++++ ||.+.           .++++...+++++++++++|+
T Consensus       334 ~~~~~vr~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~p-----------~l~is~~ht~~dId~~l~~l~  400 (431)
T PRK06209        334 GLQDHVRV-SGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRR-GVLMP-----------SLVVSYAHGDADIERTIDAVH  400 (431)
T ss_pred             CCCeEEEe-ecceEEEEEecCCcccCCcHHHHHHHHHHHHHC-Ccccc-----------cccccccCCHHHHHHHHHHHH
Confidence            443  222 2222222221  1  11111    344555555 98761           256776679999999999998


Q ss_pred             HhC
Q 036024          270 ALF  272 (272)
Q Consensus       270 ~~l  272 (272)
                      +++
T Consensus       401 ~~l  403 (431)
T PRK06209        401 GAL  403 (431)
T ss_pred             HHH
Confidence            764

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.21  E-value=3e-09  Score=100.79  Aligned_cols=242  Identities=12%  Similarity=0.049  Sum_probs=141.2

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccC-CCC----C-CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPD-LKG----T-SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA   88 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~   88 (272)
                      ...++..| +++.++.+.++...+| ++.    . .++.+|++++|++-.+...   ++++|+++|+++|+++++|.++.
T Consensus       604 p~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~---~I~eI~~i~h~~G~~v~VDgA~~  680 (954)
T PRK05367        604 PASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEE---TIREICEIVHEHGGQVYLDGANM  680 (954)
T ss_pred             HHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecC---CHHHHHHHHHHcCCEEEEECcCh
Confidence            45567788 9999999866444443 221    1 3567787888887644333   49999999999999999999996


Q ss_pred             ccccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcchHHHHHhhh-hhccCCcchH--
Q 036024           89 AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFPVINDFNRII-CTCFNGASNI--  161 (272)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--  161 (272)
                      .....-  .....+..  |  ++.+|.+|+|+.|    |--+|.+.+.+.+.. .++.-........ ......++..  
T Consensus       681 ~al~~l--~~pg~~GA--D--i~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p-~lpg~~v~~~~~~~~~g~v~ta~~g~  753 (954)
T PRK05367        681 NAQVGL--ARPGDIGA--D--VSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAP-FLPGHPVQIAGGETGIGAVSAAPFGS  753 (954)
T ss_pred             hhccCC--CChhhcCC--C--EEEecCcccCCCCcCCCCCceEEEeecccccc-cCCCCccCcCCCCCCcCcchhHHHHH
Confidence            322221  11122221  2  8888999997522    333778887754421 1110000000000 0011111222  


Q ss_pred             --HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC--ceEEEeec---C---CCChHHHHHHHHH
Q 036024          162 --AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN--APYVWAHF---P---GRKSWDVFAEILE  230 (272)
Q Consensus       162 --~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--~~~~~i~l---~---~~~~~~~~~~ll~  230 (272)
                        ...++...+...+.+.+++..++.-.+++++.+.|++. .+.+.++.+  ..=+.+.+   +   +....++.++| .
T Consensus       754 al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL-~  832 (954)
T PRK05367        754 ASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRL-I  832 (954)
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHH-H
Confidence              22223334444566777788888889999999999874 333333211  00122333   3   24557777777 5


Q ss_pred             hcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          231 KTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       231 ~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      ++|+.... ..| +. .+.+|++.  +.+++|+++++++++++
T Consensus       833 d~G~~~~t-~~~-pv-~~~l~i~ptE~~s~~elDr~~~al~~i  872 (954)
T PRK05367        833 DYGFHAPT-MSF-PV-AGTLMVEPTESESKAELDRFCDAMIAI  872 (954)
T ss_pred             HCCCeEee-cCC-cc-CCEEEEEeeecCCHHHHHHHHHHHHHH
Confidence            55998754 223 32 67788885  66899999999998764

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.21  E-value=1.4e-09  Score=91.87  Aligned_cols=157  Identities=18%  Similarity=0.245  Sum_probs=100.3

Q ss_pred             HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC   95 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~   95 (272)
                      ......| +...+.++.-.++.--++  ++++++++-+|.||+..+.+   +++|.++|+++|+++|+|+.+......  
T Consensus       135 ~~~~~~gie~~~vd~~~~~~~~~~i~--~~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~--  207 (409)
T KOG0053|consen  135 KFLPKFGGEGDFVDVDDLKKILKAIK--ENTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQ--  207 (409)
T ss_pred             HHHHHhCceeeeechhhHHHHHHhhc--cCceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCccccc--
Confidence            3344556 667776665433332233  47999999999999999966   999999999999999999999853211  


Q ss_pred             CCCccccCCCCCceEEEecCccccC-CCccceeEEEec-ccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc
Q 036024           96 PRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVP-EELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE  173 (272)
Q Consensus        96 ~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~  173 (272)
                        ....+.  .|  |++.|.+|.+| ....=.|.++.+ .++        ..++...........++....-..     .
T Consensus       208 --~pL~lG--AD--IV~hSaTKyi~Ghsdvi~G~iv~n~~~~--------~~~l~~~~~~lg~~~~p~~~~ll~-----R  268 (409)
T KOG0053|consen  208 --DPLPLG--AD--IVVHSATKYIGGHSDVIGGSVVLNSEEL--------ASRLKFLQEDLGWCEDPFDLFLLS-----R  268 (409)
T ss_pred             --ChhhcC--CC--EEEEeeeeeecCCcceeeeEEecCcHHH--------HHHHHHHHHHhcCCCCHHHHHHHh-----c
Confidence              111221  22  99999999986 344545777776 333        555555554444445555433222     2


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          174 GLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      +.+.+.-+.++..+++..+.+.|+..
T Consensus       269 glktl~lRi~~~~ena~~~A~~Le~~  294 (409)
T KOG0053|consen  269 GLKTLHLRINKHSENALKIALLLEAH  294 (409)
T ss_pred             CcchhhhhHHHHHHHHHHHHHHhhhC
Confidence            23333445566667766677777764

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.20  E-value=5.4e-09  Score=91.62  Aligned_cols=163  Identities=17%  Similarity=0.223  Sum_probs=97.0

Q ss_pred             HHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVT   92 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~   92 (272)
                      ..+.+.| +++.++ ++.   .++ +++  .+++++|++.++.||+|.+.+   +++|+++|+++|+++++|.++.....
T Consensus       127 ~~l~~~Gi~v~~vd-~~~---d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~  199 (437)
T PRK05613        127 VTLNRLGIEVTFVE-NPD---DPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL  199 (437)
T ss_pred             HHHHhcCeEEEEEC-CCC---CHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc
Confidence            3456778 888887 222   122 222  267899998899999998877   99999999999999999999864221


Q ss_pred             CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEe-ccccc--c------------c----C----CcchHH----
Q 036024           93 DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV-PEELL--F------------S----S----GFPVIN----  145 (272)
Q Consensus        93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~-~~~~~--~------------~----~----~~~~~~----  145 (272)
                         ..+ ..+..    -+++.|++|.++..|--+|-+++ +.+..  .            .    .    ...+..    
T Consensus       200 ---~~p-~~~Ga----Divv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (437)
T PRK05613        200 ---VRP-LELGA----DVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFG  271 (437)
T ss_pred             ---cCh-HHhCC----CEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHH
Confidence               111 22221    28899999998755544444444 32210  0            0    0    000000    


Q ss_pred             --HHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          146 --DFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       146 --~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                        .............++..     +++...+.+.+..+.++..+++..+.+.|+++
T Consensus       272 ~~~~~~~~~~~G~~~~p~~-----a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~h  322 (437)
T PRK05613        272 LKARAGLLRDTGATLSPFN-----AWVTAQGLDTLSLRLERHNENAIKVAEFLNNH  322 (437)
T ss_pred             HHHHHHHHHhcCCCCCHHH-----HHHHHcccCcHHHHHHHHHHHHHHHHHHHHcC
Confidence              00111112222233332     22222344556778888999999999999987

>PRK15029 arginine decarboxylase; Provisional

Probab=99.19  E-value=3.9e-09  Score=97.18  Aligned_cols=141  Identities=12%  Similarity=0.063  Sum_probs=91.0

Q ss_pred             EEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc-cCCCCCCcccc-----CCCCCceEEEecCccccCC
Q 036024           48 IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV-TDGCPRSIYEI-----PGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        48 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~-----~~~~~~~i~~~s~sK~~g~  121 (272)
                      ++++++|++ -|.+.+   +++|+++|+++++.+++||+|+... +.+..+....+     ....-.++++.|.+|+++ 
T Consensus       315 avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~-  389 (755)
T PRK15029        315 YCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN-  389 (755)
T ss_pred             EEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhccc-
Confidence            899999984 588866   8999999999999999999997533 33221111222     101122489999999995 


Q ss_pred             CccceeEEEeccc--ccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHh
Q 036024          122 TGVRLGWTVVPEE--LLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLAS  198 (272)
Q Consensus       122 ~g~r~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~  198 (272)
                      +-.+.+++.....  .+.      .+++........+++++....|++......... ..++..+...+....+++.+..
T Consensus       390 alTQaS~LHv~~~~~~id------~~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~  463 (755)
T PRK15029        390 ALSQASYIHVREGRGAIN------FSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMAR  463 (755)
T ss_pred             chhhhhhheeCCCccccC------HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence            3334556666443  221      356666666666667777777676666533332 3456667777777778877765


Q ss_pred             C
Q 036024          199 L  199 (272)
Q Consensus       199 ~  199 (272)
                      +
T Consensus       464 ~  464 (755)
T PRK15029        464 L  464 (755)
T ss_pred             c
Confidence            4

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.18  E-value=8.7e-09  Score=90.61  Aligned_cols=118  Identities=17%  Similarity=0.137  Sum_probs=79.6

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...+...| +++.++++.+ .+.+|++.     .+++++|+++++   +|..   .++++|.++|++
T Consensus       112 d~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~-~~~id~~~le~~i~~~tkaVi~~~~---~G~p---~dl~~I~~la~~  184 (438)
T PRK15407        112 DEVITVAAGFPTTVNPIIQNGLVPVFVDVELP-TYNIDASLLEAAVSPKTKAIMIAHT---LGNP---FDLAAVKAFCDK  184 (438)
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHcCcCCeEEEEeCC---CCCh---hhHHHHHHHHHH
Confidence            56777766665 666677788 8888888754 55566433     378899999864   4443   458999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEeccccc
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVPEELL  136 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~~~~~  136 (272)
                      +++++|+|++|+....-. ...+..+.   +  +.+.||  +|.+. .|- .|+++++++.+
T Consensus       185 ~gi~vIeDaa~a~G~~~~-g~~~G~~g---d--~~~fSf~~~k~~~-~ge-GG~l~t~d~~l  238 (438)
T PRK15407        185 HNLWLIEDNCDALGSTYD-GRMTGTFG---D--IATLSFYPAHHIT-MGE-GGAVFTNDPLL  238 (438)
T ss_pred             CCCEEEEECccchhhhcC-CeeeeccC---c--eEEEeCCCCCCcc-ccC-ceEEEECCHHH
Confidence            999999999998543221 22233332   2  445566  47675 333 49999988774

>PRK04311 selenocysteine synthase; Provisional

Probab=99.17  E-value=6.2e-09  Score=91.66  Aligned_cols=235  Identities=14%  Similarity=0.085  Sum_probs=131.7

Q ss_pred             HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCcc--c--cCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPT--G--HAATQNQLEQLVEFARNNGSIIIFDSAYAA   89 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~npt--G--~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~   89 (272)
                      ......| +++.++.+.... .-|+++  .++++++++++++||+  |  ...   ++++|+++|+++|+++++|...+.
T Consensus       186 ~~~~~~G~~l~~v~~~~~t~-~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~---dl~eI~~lak~~gi~vivD~gsG~  261 (464)
T PRK04311        186 DVMRQAGARLVEVGTTNRTH-LRDYEQAINENTALLLKVHTSNYRIEGFTKEV---SLAELAALGKEHGLPVVYDLGSGS  261 (464)
T ss_pred             HHHHHCCcEEEEECCCCCCC-HHHHHHhcCccCeEEEEEcCCCccccccCCcC---CHHHHHHHHHHcCCeEEEECCCcc
Confidence            3456778 888887643211 112222  3789999999999983  4  333   499999999999999999996443


Q ss_pred             cc----cC-CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHH
Q 036024           90 YV----TD-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQA  164 (272)
Q Consensus        90 ~~----~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (272)
                      +.    ++ +..+.+..... .+--++++|.+|.+|.|  ..|++++++++        ++.+.+...............
T Consensus       262 l~~~~~~gl~~~p~~~~~l~-~GaDiv~fSg~K~LgGp--~~G~i~g~~~l--------i~~l~~~~~~r~lr~dk~~l~  330 (464)
T PRK04311        262 LVDLSQYGLPDEPTVQELLA-AGVDLVTFSGDKLLGGP--QAGIIVGKKEL--------IARLKKHPLKRALRVDKLTLA  330 (464)
T ss_pred             cccchhccCCCCCchhhHHh-cCCcEEEecCcccccCC--ceEEEEEcHHH--------HHHHhhchhHHHHhcchHHHH
Confidence            21    11 01111222110 11228999999998744  48999998877        344432111111112223333


Q ss_pred             HHHHhcc---ccc--------HHHHHHHHHHHHHHHHHHHHHHHhC---CC--eEecC----CC---------ceEEEee
Q 036024          165 GGLACLS---SEG--------LEAVHSVVDYYKENTKILIDTLASL---GI--KVYGG----IN---------APYVWAH  215 (272)
Q Consensus       165 a~~~~l~---~~~--------~~~~~~~~~~~~~~~~~l~~~L~~~---g~--~~~~~----~~---------~~~~~i~  215 (272)
                      +..+.+.   +..        .+.+....++.+++++.+.+.|+..   ++  .+...    .+         +..+.+.
T Consensus       331 ~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~  410 (464)
T PRK04311        331 ALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLT  410 (464)
T ss_pred             HHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEe
Confidence            3333332   111        1234445577888899999999875   22  33321    01         1223333


Q ss_pred             cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          216 FPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       216 l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                      ..+....+ ..+.|++....|..-     ...+.+.+.+. ..++|++.+.++|++++
T Consensus       411 ~~~~~~~~-l~~~lr~~~~~i~~r-----~~~~~~~ld~r~~~~~~~~~~~~~~~~~~  462 (464)
T PRK04311        411 PKDRSLEA-LAARLRLLPPPVIGR-----IEDGRLLLDLRTLEEEDEERLAAALLEAL  462 (464)
T ss_pred             CCCCCHHH-HHHHHhcCCCCEEEE-----EECCEEEEEeCcCCHHHHHHHHHHHHHHh
Confidence            33334444 444556644333211     12567778874 47888888888887753

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.17  E-value=2.3e-09  Score=88.60  Aligned_cols=172  Identities=17%  Similarity=0.236  Sum_probs=110.2

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD   93 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~   93 (272)
                      +...++++| ++..+..++-..|...++  +++|+|++-+-.||.+.+++   +++|+++|+++++++|+|..+..    
T Consensus       118 f~~tl~~~Gi~v~fvd~~d~~~~~~aI~--~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~at----  188 (426)
T COG2873         118 FSHTLKRLGIEVRFVDPDDPENFEAAID--ENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFAT----  188 (426)
T ss_pred             HHHHHHhcCcEEEEeCCCCHHHHHHHhC--cccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCc----
Confidence            566778999 998888775434444344  79999999999999999977   99999999999999999999874    


Q ss_pred             CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccC-------CcchHHHHHhhhhhccCCcchHHHHHH
Q 036024           94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS-------GFPVINDFNRIICTCFNGASNIAQAGG  166 (272)
Q Consensus        94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~  166 (272)
                        + -+.+... .+--|++.|++|.+|--|.-+|-+++..-.++-.       +......+........++...+...+-
T Consensus       189 --p-yl~rP~~-hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r  264 (426)
T COG2873         189 --P-YLCRPIE-HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKAR  264 (426)
T ss_pred             --c-eecchhh-cCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHH
Confidence              1 1111110 1112999999999987788888877754332111       000011111111111122222222322


Q ss_pred             HHhcc--------------cccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          167 LACLS--------------SEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       167 ~~~l~--------------~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      ...++              ..+.+.+.-+.++..+|+..+.+.|+.+
T Consensus       265 ~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~H  311 (426)
T COG2873         265 VQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENH  311 (426)
T ss_pred             HHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcC
Confidence            22222              2233556667788899999999999986

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.15  E-value=4.8e-09  Score=93.70  Aligned_cols=236  Identities=13%  Similarity=0.073  Sum_probs=133.3

Q ss_pred             eeEEeecCCCCCcccC-CCC-C-----CCceEEEEe--cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC-
Q 036024           24 NIEYLECGPGNNFFPD-LKG-T-----SRTDIIFFC--SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-   93 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~d-l~~-~-----~~~~~i~~~--~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~-   93 (272)
                      +++.+|.+.++.+.++ +++ .     .+++.++++  ..++.||.+-|   +++|+++|+++|+++.+|.+|+....- 
T Consensus       235 ~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~  311 (522)
T TIGR03799       235 NLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLS  311 (522)
T ss_pred             cEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhC
Confidence            5888999765444444 322 1     345566555  55779999966   999999999999999999999853321 


Q ss_pred             CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh-----hh-hhccCCcchHHHHHHH
Q 036024           94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR-----II-CTCFNGASNIAQAGGL  167 (272)
Q Consensus        94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~a~~  167 (272)
                      .....+  +.+...--.+..+.+|.++ ...-+|.++..+....+.+......+..     .. ...-.+-+..+ ..+.
T Consensus       312 ~~~r~~--l~gle~aDSit~d~HK~l~-~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw  387 (522)
T TIGR03799       312 NTYRHL--LKGIERADSVTIDAHKQLY-VPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVY  387 (522)
T ss_pred             HHHHHH--hcCchhCCEEEEChhhcCC-cCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHH
Confidence            111111  1221111267779999664 2244888888654321111110001100     00 00111112222 1234


Q ss_pred             HhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCC----------------h-------HH
Q 036024          168 ACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRK----------------S-------WD  223 (272)
Q Consensus       168 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~----------------~-------~~  223 (272)
                      ..++..+...++++.++..+.++++.+.|++. ++++..+..-..+.+++....                .       ..
T Consensus       388 ~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~  467 (522)
T TIGR03799       388 AGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKF  467 (522)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHH
Confidence            44444455677999999999999999999887 899887655555555642100                0       12


Q ss_pred             HHHHHHHhcCeEeeCCCCCC-----CCCCCeEEEEccC---CHHHHHHHHHH
Q 036024          224 VFAEILEKTHITTVPGSGFG-----PGGEEYIRISGFG---HRESILEASRR  267 (272)
Q Consensus       224 ~~~~ll~~~gi~v~~g~~~~-----~~~~~~~R~s~~~---~~~~i~~~l~~  267 (272)
                      +..++.++ |..........     ..+...+|+++.+   ++++++.+++.
T Consensus       468 i~~~~~~~-G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~  518 (522)
T TIGR03799       468 IQKRQREA-GKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE  518 (522)
T ss_pred             HHHHHHhc-CCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence            33334444 54443311111     1123569999744   68888888765

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.14  E-value=2.4e-09  Score=84.78  Aligned_cols=235  Identities=16%  Similarity=0.189  Sum_probs=147.0

Q ss_pred             cccccCcccchHH--hcccc-eeEEeecCCCCCcccCCCC-----------C-CCceEEEEecCCCccccCCCHHHHHHH
Q 036024            6 SVIVGQAGDLEDE--VGKYC-NIEYLECGPGNNFFPDLKG-----------T-SRTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         6 ~~~~~~~~~~~~~--~~~~g-~~~~~~~~~~~~~~~dl~~-----------~-~~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      .++++...+|...  +.+.| ++..+|-.....+.++++.           . .++.+.++++|...-|.+   .+.+++
T Consensus       102 ~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl---~Dakkv  178 (382)
T COG1103         102 WVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL---ADAKKV  178 (382)
T ss_pred             EEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc---hhhHHH
Confidence            3455555555543  35577 9999996655555555443           1 457888999998888887   569999


Q ss_pred             HHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024           71 VEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI  150 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~  150 (272)
                      +++|+++++.+++..+|.-   +--+.+..+...+    ++++|-+|+++++ -.+|.+..+.++.        +..-+.
T Consensus       179 a~ic~e~gvPlllN~AYt~---Grmpvs~ke~g~D----FiVgSGHKsmAAs-~PiGvl~~~eE~a--------e~V~r~  242 (382)
T COG1103         179 AKICREYGVPLLLNCAYTV---GRMPVSGKEIGAD----FIVGSGHKSMAAS-APIGVLAMSEEWA--------EIVLRR  242 (382)
T ss_pred             HHHHHHcCCceEeecceee---ccccccccccCCC----EEEecCccchhcc-CCeeEEeehhHHH--------HHHHhh
Confidence            9999999999999999975   2224455555322    9999999999754 4799999988883        222111


Q ss_pred             h-------h--h---ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEec--CCCceEEEee
Q 036024          151 I-------C--T---CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYG--GINAPYVWAH  215 (272)
Q Consensus       151 ~-------~--~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~--~~~~~~~~i~  215 (272)
                      .       .  .   +..+.+.....|.   +  +....--++++.--+++++|.+.|+++| +.-.+  |.....+.+.
T Consensus       243 Sg~~~~~KEvellGCT~rGapivTlmAS---f--P~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fe  317 (382)
T COG1103         243 SGRAFPKKEVELLGCTVRGAPIVTLMAS---F--PHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFE  317 (382)
T ss_pred             cccccccceeeeecccccCchHHHHHhc---C--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeec
Confidence            1       0  0   1222333322222   1  1122224566777788999999999984 65543  2233344444


Q ss_pred             cCCC---------ChHHHHHHHHHhcCeE-eeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHh
Q 036024          216 FPGR---------KSWDVFAEILEKTHIT-TVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEAL  271 (272)
Q Consensus       216 l~~~---------~~~~~~~~ll~~~gi~-v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~  271 (272)
                      -|..         ..--+..+| ++.||. +.||      ...++.+|.+ .+.|+++..+++++++
T Consensus       318 tp~f~eIakk~~r~gyFlY~EL-K~RgI~GI~~G------~Tk~~K~svyGl~~Eqve~V~~afkeI  377 (382)
T COG1103         318 TPVFHEIAKKHKRKGYFLYEEL-KKRGIHGIQPG------QTKYFKLSVYGLSWEQVEYVVDAFKEI  377 (382)
T ss_pred             CchHHHHHHhCcCCceeeHHHH-HhcCccccccC------ceeEEEEEeecCCHHHHHHHHHHHHHH
Confidence            4421         111123334 444653 2333      3678999964 5999999999998875

>PLN02263 serine decarboxylase

Probab=99.13  E-value=2.5e-08  Score=87.19  Aligned_cols=244  Identities=13%  Similarity=0.039  Sum_probs=149.4

Q ss_pred             cccccCccc--chHHhcccc-eeEEeecCCCCCcccC-CCC-C----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            6 SVIVGQAGD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         6 ~~~~~~~~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      +++.+...+  ....++-+| +++.+|.++++.+.++ +++ .    ..+-+|+.+-.+.++|.+   +++++|.++|++
T Consensus       180 vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~  256 (470)
T PLN02263        180 ILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEE  256 (470)
T ss_pred             EEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHH
Confidence            444454444  557777788 9999999755444443 222 1    123455556789999998   669999999999


Q ss_pred             cCC-----EEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024           77 NGS-----IIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI  150 (272)
Q Consensus        77 ~~~-----~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~  150 (272)
                      +|+     ++.+|.+|+++..... ..+....  .....-+.-+.+|.++ ....+|.++..+..+.. +..-.+.+...
T Consensus       257 ~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df--~~~vDSIsvD~HK~l~-~P~~cgvll~R~~~~~~-~~~~~~Yl~~~  332 (470)
T PLN02263        257 CGFSQDRFYIHCDGALFGLMMPFVKRAPKVTF--KKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINV-LSSNVEYLASR  332 (470)
T ss_pred             cCCccCCeeEEEeccchhhHhhhcccccccCC--CcCccEEEECCccccC-CCcCEEEEEEehhhHhh-hccChHhhCCC
Confidence            997     9999999987654211 1111111  1111133447799887 55778998888765311 11111222111


Q ss_pred             hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHH
Q 036024          151 ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILE  230 (272)
Q Consensus       151 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~  230 (272)
                      ......+=+......+...++..+.+.+.++.++..++++++.+.|++.|+........+.+.+.-+.  + +.    ..
T Consensus       333 d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~f~~p~--~-~~----~~  405 (470)
T PLN02263        333 DATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFERPK--D-EE----FV  405 (470)
T ss_pred             CCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEEEecCc--h-HH----hh
Confidence            11111111111223344555566678889999999999999999999998887665566666666542  1 11    22


Q ss_pred             hcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          231 KTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       231 ~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      + |..+.+-       ...+++.+.  .+++.++++++.|++.
T Consensus       406 ~-gW~L~~~-------~~~~Hivvmphv~~~~id~fi~DL~~~  440 (470)
T PLN02263        406 R-RWQLACQ-------GNIAHVVVMPSVTIEKLDYFLKELVEK  440 (470)
T ss_pred             c-ceEEccC-------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3 6666431       235788863  3788899999988764

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.12  E-value=1.2e-08  Score=96.67  Aligned_cols=239  Identities=11%  Similarity=0.044  Sum_probs=142.6

Q ss_pred             ccccccc-Ccccc----hHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVG-QAGDL----EDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~-~~~~~----~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |+|++.. .+|.+    ...++..| +++.++.+...     .. ..++-.+++.+| |.+|.+.+   +++|+++|+++
T Consensus       193 ~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~-----~~-~~~v~~vlvq~P-~~~G~v~d---v~~I~~~ah~~  262 (993)
T PLN02414        193 KKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD-----YS-SGDVCGVLVQYP-ATDGEVLD---YAEFVKNAHAN  262 (993)
T ss_pred             CEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc-----cc-cCceEEEEEecC-CCCeEEcC---HHHHHHHHHHc
Confidence            4466644 44443    34445678 88888875421     01 123333443344 46899966   99999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC---CCccceeEEEecccccccCCc-chHHH-------
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG---FTGVRLGWTVVPEELLFSSGF-PVIND-------  146 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g---~~g~r~G~~~~~~~~~~~~~~-~~~~~-------  146 (272)
                      |+++++ .++.. .... -.++.++..+    |++++..|..+   ..|-+.|++.+++++.+ ..+ +++..       
T Consensus       263 GaL~iV-aad~l-al~~-l~~pge~GAD----i~vgsgqKwg~P~G~GGP~aGflavr~~~~r-~~PgriVG~s~d~~g~  334 (993)
T PLN02414        263 GVKVVM-ATDLL-ALTM-LKPPGEWGAD----IVVGSAQRFGVPMGYGGPHAAFLATSQEYKR-LMPGRIIGVSVDSSGK  334 (993)
T ss_pred             CCEEEE-EECHH-HhcC-CCCHhhccCc----EEEECCCccccCCCCCCCCeeEEEECHHHHh-hCCCcccCcccCCCCC
Confidence            999999 44432 1111 1133444322    88999999762   23455899999887743 222 11110       


Q ss_pred             --H------Hhh-hhhccCCcchHHHHHHHHhcc-----cccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEE
Q 036024          147 --F------NRI-ICTCFNGASNIAQAGGLACLS-----SEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYV  212 (272)
Q Consensus       147 --~------~~~-~~~~~~~~~~~~~~a~~~~l~-----~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~  212 (272)
                        +      +.. ...-..+++.-+..++.+.+.     ..+...+++..++..+++.++++.|...|+++..+.....+
T Consensus       335 ~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~~v  414 (993)
T PLN02414        335 PALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFDTV  414 (993)
T ss_pred             cccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcCeE
Confidence              0      000 000111233323333333332     12224568888999999999999999889888665333345


Q ss_pred             EeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024          213 WAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE  269 (272)
Q Consensus       213 ~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~  269 (272)
                      .+.++  +..++..+|.++ ||.+....      .+.+|+|+  .+|++||+++++.|.
T Consensus       415 t~~~~--~~~~v~~~L~~~-gI~l~~~~------~~~lrvs~~e~~T~edId~L~~~l~  464 (993)
T PLN02414        415 KVKCS--DADAIADAAAKV-GINLRVVD------ANTVTVSFDETTTLEDVDKLFKVFA  464 (993)
T ss_pred             EEecC--CHHHHHHHHHHC-CCeeEEec------CCeEEEEeeccCCHHHHHHHHHHHc
Confidence            55664  456777777655 99775321      35699996  669999999999985

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.11  E-value=4.2e-08  Score=83.31  Aligned_cols=244  Identities=18%  Similarity=0.151  Sum_probs=137.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++++-++. =.......| +.+.+.++++ -+.+|.+.     .+++|+|+..+--   |...   +.++|.++|++
T Consensus        75 DeVI~ps~TfvATan~i~~~Ga~PVFvDid~~-T~nid~~~ie~aIt~~tKAIipVhl~---G~~~---dm~~i~~la~~  147 (374)
T COG0399          75 DEVIVPSFTFVATANAVLLVGAKPVFVDIDPD-TLNIDPDLIEAAITPRTKAIIPVHLA---GQPC---DMDAIMALAKR  147 (374)
T ss_pred             CEEEecCCchHHHHHHHHHcCCeEEEEecCCc-ccCCCHHHHHHHcccCCeEEEEehhc---cCCC---CHHHHHHHHHH
Confidence            45555554444 234445567 9999999977 56666433     3779999988552   4443   49999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ||++||+|.+++....-. ...+.++.   +  +-+.||  .|.++ +| --|.++++++.+       .+..+.++...
T Consensus       148 ~~l~vIEDaAqa~Ga~y~-gk~vGt~G---d--~~~fSF~~~K~it-tg-EGGav~tnd~el-------a~k~~~lr~hG  212 (374)
T COG0399         148 HGLPVIEDAAQAHGATYK-GKKVGSFG---D--IGAFSFHATKNLT-TG-EGGAVVTNDEEL-------AEKARSLRNHG  212 (374)
T ss_pred             cCCeEEEEcchhccCeec-Cccccccc---c--eEEEEecCCCCcc-cc-CceEEEeCCHHH-------HHHHHHHHHhC
Confidence            999999999998533221 12233332   1  555566  59997 55 568888888764       33333332111


Q ss_pred             c--------------CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCc----e-EEEe
Q 036024          155 F--------------NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINA----P-YVWA  214 (272)
Q Consensus       155 ~--------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~----~-~~~i  214 (272)
                      .              .........|+....+.   +.+++..++=++..+...+.|+++ ++.+.....+    + ...+
T Consensus       213 ~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL---~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i  289 (374)
T COG0399         213 LSRDAVFKYLHEELGYNYRLTEIQAAIGLAQL---ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTI  289 (374)
T ss_pred             cCCCccccceeeecccccCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEE
Confidence            1              11222223333333332   333555555566667777777766 3444332222    2 2333


Q ss_pred             ecCCC-ChHHHHHHHHHhcCe----EeeCCCCCC--------C-C--------CCCeEEEEcc--CCHHHHHHHHHHHHH
Q 036024          215 HFPGR-KSWDVFAEILEKTHI----TTVPGSGFG--------P-G--------GEEYIRISGF--GHRESILEASRRLEA  270 (272)
Q Consensus       215 ~l~~~-~~~~~~~~ll~~~gi----~v~~g~~~~--------~-~--------~~~~~R~s~~--~~~~~i~~~l~~l~~  270 (272)
                      .++.. ...+.+...|++.||    +..|.....        + .        ....+++-++  .+++++++.++.|++
T Consensus       290 ~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~  369 (374)
T COG0399         290 LVDEEGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKE  369 (374)
T ss_pred             EecCCCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence            44432 333445555566544    444432220        0 0        1345666653  489999999999987


Q ss_pred             hC
Q 036024          271 LF  272 (272)
Q Consensus       271 ~l  272 (272)
                      ++
T Consensus       370 ~~  371 (374)
T COG0399         370 VL  371 (374)
T ss_pred             Hh
Confidence            64

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.05  E-value=1.9e-08  Score=91.76  Aligned_cols=237  Identities=14%  Similarity=0.052  Sum_probs=138.6

Q ss_pred             HHhcccc-eeEEeecCCC-CCc----c-----cC-----CCCCCCce---EEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024           17 DEVGKYC-NIEYLECGPG-NNF----F-----PD-----LKGTSRTD---IIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~-~~~----~-----~d-----l~~~~~~~---~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      +.+...| ..++++...+ .|+    .     ++     +++.++.+   .+++++|+ .-|.+.+   +++|++.|+.+
T Consensus       250 haLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd---~~~I~~~~~~~  325 (714)
T PRK15400        250 HLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYN---TDFIKKTLDVK  325 (714)
T ss_pred             HHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecC---HHHHHHHhCCC
Confidence            3455566 7788766542 111    1     11     22234444   78888885 6699977   77778888776


Q ss_pred             CCEEEEcccCCccc-cCCCCCCcccc-CCC--CCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           78 GSIIIFDSAYAAYV-TDGCPRSIYEI-PGA--REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        78 ~~~vi~D~~~~~~~-~~~~~~~~~~~-~~~--~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +  +++||+|+.+. +.+..++...+ .+.  .+.++++.|.+|.++ +=.+.+++...... .      .+++......
T Consensus       326 ~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~-alTQaS~LHvkg~v-d------~~~~n~a~~m  395 (714)
T PRK15400        326 S--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLA-AFSQASMIHVKGDV-N------EETFNEAYMM  395 (714)
T ss_pred             C--EEEEccchhhhccCcccCCcChhhcCCCCCCceEEEEchhhccc-chhHHhHHHHcCCC-C------HHHHHHHHHH
Confidence            6  78999998543 22221111222 111  245699999999985 33334455443332 1      3566666666


Q ss_pred             ccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC-C------CeEecCCC-----------------
Q 036024          154 CFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL-G------IKVYGGIN-----------------  208 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g------~~~~~~~~-----------------  208 (272)
                      ..+++++....|++.....-.. ...++..+...+....+++.|.++ +      +++..++.                 
T Consensus       396 ~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whg  475 (714)
T PRK15400        396 HTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHG  475 (714)
T ss_pred             HcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccC
Confidence            6666777777666666553222 234667777788888888888765 4      55543220                 


Q ss_pred             ------------ceEEEeecCCC----------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHH
Q 036024          209 ------------APYVWAHFPGR----------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASR  266 (272)
Q Consensus       209 ------------~~~~~i~l~~~----------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~  266 (272)
                                  ..=+.+..++.          -+...+.+.|+++||.+.-...+    .-.+-+++..++++++++++
T Consensus       476 f~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~----~iLfl~s~g~t~~~~~~L~~  551 (714)
T PRK15400        476 FKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPY----NLLFLFSIGIDKTKALSLLR  551 (714)
T ss_pred             cccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCC----eEEEEeCCCCCHHHHHHHHH
Confidence                        00133333321          12344555568889998654422    22445666779999888888


Q ss_pred             HHHHh
Q 036024          267 RLEAL  271 (272)
Q Consensus       267 ~l~~~  271 (272)
                      +|.++
T Consensus       552 aL~~f  556 (714)
T PRK15400        552 ALTDF  556 (714)
T ss_pred             HHHHH
Confidence            87653

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.02  E-value=1.1e-08  Score=89.93  Aligned_cols=222  Identities=15%  Similarity=0.155  Sum_probs=138.4

Q ss_pred             ccccCccc--chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCce--EEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            7 VIVGQAGD--LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTD--IIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         7 ~~~~~~~~--~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~--~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      ++.+...+  +...++.+| +...+|+.+. ....|++.+     +++-  +|+-+-++.+||.+   +++++|.++|++
T Consensus       160 ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---Ddi~~ia~ia~~  235 (460)
T COG0076         160 IVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---DDIEELADIAEE  235 (460)
T ss_pred             EEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCcc---CCHHHHHHHHHH
Confidence            44444444  667888899 9999999886 555663331     2222  37777899999998   679999999999


Q ss_pred             cCCEEEEcccCCccccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHHHh--hhh
Q 036024           77 NGSIIIFDSAYAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNR--IIC  152 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~--~~~  152 (272)
                      +++++.+|.+++++...- .+.... ..+.+...-+.-+++|... ...-+||++..++. +.+.+. ....+..  -..
T Consensus       236 ~~i~lHVDAA~GG~~~pf~~~~~~~-~f~l~~vdSIt~d~HK~g~-aP~~~G~il~rd~e~l~~~~~-~~~~yl~~~~~~  312 (460)
T COG0076         236 YGIWLHVDAAFGGFLLPFLEPDGRW-DFGLEGVDSITVDGHKYGL-APIGCGVVLFRDEEALRRILI-FADYYLPGGGIP  312 (460)
T ss_pred             cCCcEEEEccccceeecccCccchh-hcCCCCceEEEECcccccC-CCCCceEEEEECHHHhhhhhh-cccccCCCCCcC
Confidence            999999999999766532 111111 1122222355668999664 55668999998873 221110 0111111  000


Q ss_pred             hccCCcchH--HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCceEEEeecCCCC--hHHHHHH
Q 036024          153 TCFNGASNI--AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGINAPYVWAHFPGRK--SWDVFAE  227 (272)
Q Consensus       153 ~~~~~~~~~--~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~i~l~~~~--~~~~~~~  227 (272)
                      ......+.+  ...+....+...+.+.+.++.++..+.++++.+.|++.| +++..+...+.+.++.++..  ..+...+
T Consensus       313 ~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~  392 (460)
T COG0076         313 NFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSER  392 (460)
T ss_pred             ceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHH
Confidence            001111112  222333344445567779999999999999999999996 99988668888888886422  2333333


Q ss_pred             HHHhcCeEe
Q 036024          228 ILEKTHITT  236 (272)
Q Consensus       228 ll~~~gi~v  236 (272)
                      + ++.|..+
T Consensus       393 ~-~~~gw~v  400 (460)
T COG0076         393 L-DRRGWQV  400 (460)
T ss_pred             H-HhcCcee
Confidence            3 3336665

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.01  E-value=2.9e-08  Score=90.68  Aligned_cols=216  Identities=11%  Similarity=-0.021  Sum_probs=127.6

Q ss_pred             ceEEEEecCCCccccCCCHHHHHHHHHH-HHHcCCEEEEcccCCccc-cCCC----CCCccccCCCCCceEEEecCcccc
Q 036024           46 TDIIFFCSPNNPTGHAATQNQLEQLVEF-ARNNGSIIIFDSAYAAYV-TDGC----PRSIYEIPGAREVAIEISSFSKFS  119 (272)
Q Consensus        46 ~~~i~~~~p~nptG~~~~~~~l~~l~~~-~~~~~~~vi~D~~~~~~~-~~~~----~~~~~~~~~~~~~~i~~~s~sK~~  119 (272)
                      .|++++++|+ .-|.+.+   +++|++. |+.++ .+++||+|+.+. +.+.    +....+...+..-++++.|.+|.+
T Consensus       283 ~k~vvit~pT-YdG~~yd---i~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL  357 (720)
T PRK13578        283 FRLAVIQLGT-YDGTIYN---ARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQ  357 (720)
T ss_pred             ceEEEEECCC-Ccceeec---HHHHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcc
Confidence            5899999998 4588877   7888887 56677 999999998543 2221    111122222233469999999999


Q ss_pred             CCCccceeEEEecccccccCCcch-HHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHH-
Q 036024          120 GFTGVRLGWTVVPEELLFSSGFPV-INDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTL-  196 (272)
Q Consensus       120 g~~g~r~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L-  196 (272)
                      + +=.+.+++...+..++.....+ .+++........+++++....|++.....-.. ...++..+...+....+++.| 
T Consensus       358 ~-alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~  436 (720)
T PRK13578        358 A-GFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLIL  436 (720)
T ss_pred             h-hhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence            5 4344566666554421000000 24566666666666777777777766442222 234666777777777788877 


Q ss_pred             HhC-CCeEecCC-------------------------------------------CceEEEeecCCCC---h--------
Q 036024          197 ASL-GIKVYGGI-------------------------------------------NAPYVWAHFPGRK---S--------  221 (272)
Q Consensus       197 ~~~-g~~~~~~~-------------------------------------------~~~~~~i~l~~~~---~--------  221 (272)
                      +.. ++++..++                                           +..=+.+..++.+   +        
T Consensus       437 ~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gip  516 (720)
T PRK13578        437 ARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIP  516 (720)
T ss_pred             HhCCCeeecccccccccccccCchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCcc
Confidence            443 55544210                                           0001334444433   1        


Q ss_pred             HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       222 ~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      ...+.+.|+++||.+.-...+    .-.+-+|+..+++++++++++|.++
T Consensus       517 g~~l~~~L~e~gI~~E~~d~~----~vL~l~s~g~t~~~~~~Lv~aL~~f  562 (720)
T PRK13578        517 ATILANYLRENGIVPEKCDLN----SILFLLTPAEDMAKLQQLVAMLARF  562 (720)
T ss_pred             HHHHHHHHHHcCCEEEecCCC----eEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            244555554449998654433    2345566777999998888888753

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.01  E-value=1.7e-09  Score=92.97  Aligned_cols=153  Identities=15%  Similarity=0.146  Sum_probs=98.5

Q ss_pred             CCCceE---EEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc-ccCCCCCCccccCCC---CCceEEEecC
Q 036024           43 TSRTDI---IFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY-VTDGCPRSIYEIPGA---REVAIEISSF  115 (272)
Q Consensus        43 ~~~~~~---i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~-~~~~~~~~~~~~~~~---~~~~i~~~s~  115 (272)
                      .++.|.   +++++|++ -|.+.+   +++|+++|++++..+++||+|+.. .+.+-+.+...+..+   ...++++.|.
T Consensus       163 ~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~~gad~~~~~~~~vvqS~  238 (417)
T PF01276_consen  163 HPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALALGADRPNDPGIIVVQST  238 (417)
T ss_dssp             CTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEH
T ss_pred             CccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccccccccCCCCccchhhccCccccccceeeeech
Confidence            456555   99999984 588866   999999999999999999999843 333222232223211   2357999999


Q ss_pred             ccccCCCccceeEEEecccc-cccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHH
Q 036024          116 SKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILI  193 (272)
Q Consensus       116 sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~  193 (272)
                      +|.++ +-.+.+++....+. +.      .+++.........++++....|......... ....+++.+...++.+.++
T Consensus       239 HKtL~-altQts~lh~~~~~~v~------~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R  311 (417)
T PF01276_consen  239 HKTLP-ALTQTSMLHVKGDRIVD------HERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFR  311 (417)
T ss_dssp             HHHSS-S-TT-EEEEEETCCCTT------HHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccc-ccccceEEEecCCCccc------HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence            99996 44556777777764 32      5666666666655667777777777666444 4555778888888888999


Q ss_pred             HHHH---hC-CCeEecC
Q 036024          194 DTLA---SL-GIKVYGG  206 (272)
Q Consensus       194 ~~L~---~~-g~~~~~~  206 (272)
                      +.++   +. ++++..+
T Consensus       312 ~~i~~~~~~~~~~~~~~  328 (417)
T PF01276_consen  312 KKINRLNDIWGFKVLGP  328 (417)
T ss_dssp             HHHHHHCCT-SSEESS-
T ss_pred             HHHHhcCCCceEecCCc
Confidence            9984   33 5665443

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.00  E-value=9.8e-09  Score=88.45  Aligned_cols=237  Identities=18%  Similarity=0.169  Sum_probs=135.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++++-++. ....+...| +++.++++++ .+.+|++.     .+++|+|+++|..   |...   ++++|.++|++
T Consensus        66 deVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~-~~~id~~~~~~~i~~~t~ai~~~h~~---G~~~---d~~~i~~~~~~  138 (363)
T PF01041_consen   66 DEVIVPAYTFPATASAILWAGAEPVFVDIDPE-TLNIDPEALEKAITPKTKAILVVHLF---GNPA---DMDAIRAIARK  138 (363)
T ss_dssp             SEEEEESSS-THHHHHHHHTT-EEEEE-BETT-TSSB-HHHHHHHHHTTEEEEEEE-GG---GB------HHHHHHHHHH
T ss_pred             ceEecCCCcchHHHHHHHHhccEEEEEeccCC-cCCcCHHHHHHHhccCccEEEEecCC---CCcc---cHHHHHHHHHH
Confidence            56666665555 667888888 9999999977 77778554     2788999998653   4443   59999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +|+++|+|.+++....-. ...+....   +  +.+.||  +|.+. .| ..|+++++++.+       .+.+..+....
T Consensus       139 ~~i~lIeD~a~a~g~~~~-g~~~G~~g---d--~~~fSf~~~K~i~-~g-eGG~v~~~~~~~-------~~~~~~~~~~g  203 (363)
T PF01041_consen  139 HGIPLIEDAAQAFGARYK-GRPVGSFG---D--IAIFSFHPTKIIT-TG-EGGAVVTNDPEL-------AERARALRNHG  203 (363)
T ss_dssp             TT-EEEEE-TTTTT-EET-TEETTSSS---S--EEEEESSTTSSS--SS-S-EEEEESTHHH-------HHHHHHHTBTT
T ss_pred             cCCcEEEccccccCceeC-CEeccCCC---C--ceEecCCCCCCCc-CC-CCeeEEecHHHH-------HHHhhhhhccC
Confidence            999999999998643221 12222221   2  666676  58885 32 248888877663       33333322111


Q ss_pred             -----------------cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec-CCCc----e-
Q 036024          155 -----------------FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG-GINA----P-  210 (272)
Q Consensus       155 -----------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~----~-  210 (272)
                                       ....+.+  .|+....+   .+.+++..++-+++.+.+.+.|... ++.... +...    + 
T Consensus       204 ~~~~~~~~~~~~~~~g~n~rm~~~--~AAigl~Q---L~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~  278 (363)
T PF01041_consen  204 RSRDAFRRYRHELPPGYNFRMSEL--QAAIGLAQ---LKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYY  278 (363)
T ss_dssp             EETSECSTTEESSSS--B-B-BHH--HHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCES
T ss_pred             cCccccccccccccCCcccccHHH--HHHHHHHH---HHHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccc
Confidence                             1112222  22222222   2344666777778888999999887 554432 2221    1 


Q ss_pred             EEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCC---------------C--------CCeEEEEc--cCCHHHHH
Q 036024          211 YVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPG---------------G--------EEYIRISG--FGHRESIL  262 (272)
Q Consensus       211 ~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~---------------~--------~~~~R~s~--~~~~~~i~  262 (272)
                      .+.+.+++.   ...++...|.++ ||...+... .+.               .        ...+.+.+  ..++++++
T Consensus       279 ~f~i~~~~~~~~~rd~l~~~L~~~-GI~~~~~~~-~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~  356 (363)
T PF01041_consen  279 RFPIRLPDEALADRDELVEALRAR-GIETRPHYP-KPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVD  356 (363)
T ss_dssp             SEEEEETCCGCSTHHHHHHHHHHT-TBEEBCSTS-SCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHH
T ss_pred             cccccccccccchHHHHHHHHHHC-CCccccccc-CchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHH
Confidence            234445532   445555555555 999987542 110               0        12455554  34788898


Q ss_pred             HHHHHHH
Q 036024          263 EASRRLE  269 (272)
Q Consensus       263 ~~l~~l~  269 (272)
                      +..+.|+
T Consensus       357 ~I~~~ir  363 (363)
T PF01041_consen  357 YIAEAIR  363 (363)
T ss_dssp             HHHHHHH
T ss_pred             HHhhccC
Confidence            8888774

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=98.96  E-value=1.6e-07  Score=82.63  Aligned_cols=231  Identities=15%  Similarity=0.101  Sum_probs=125.8

Q ss_pred             HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCcc--c--cCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPT--G--HAATQNQLEQLVEFARNNGSIIIFDSAYAA   89 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~npt--G--~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~   89 (272)
                      ...+..| +++.++.+.... .-|+++  .++++++++.+++||+  |  ...+   +++|+++|+++|+++++|...+.
T Consensus       181 ~~~~~~G~~~~~v~~~~~~~-l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~d---l~~I~~la~~~g~~vivD~~sG~  256 (454)
T TIGR00474       181 DVMEQSGAKLVEVGTTNRTH-LKDYEDAITENTALLLKVHTSNYRIVGFTEEVS---IAELVALGREHGLPVMEDLGSGS  256 (454)
T ss_pred             HHHHHcCCEEEEeCCCCCCC-HHHHHHhcCcCCEEEEEEccCcccccCCCCCCC---HHHHHHHHHHcCCeEEEECCCcc
Confidence            4556678 888887643211 112322  3789999999999995  5  3444   99999999999999999976433


Q ss_pred             cccCC-----CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHH
Q 036024           90 YVTDG-----CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQA  164 (272)
Q Consensus        90 ~~~~~-----~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (272)
                      +...+     ..+.+..... .+--++++|.+|.+|.|  ..|+++++++++        +.+.+...............
T Consensus       257 l~~~~~~gl~~~p~~~~~~~-~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i--------~~l~~~~l~r~lr~~k~~la  325 (454)
T TIGR00474       257 LVDLSRYGLPDEPTVQEVIA-AGVDLVTFSGDKLLGGP--QAGIIVGKKELI--------ERLKKNPLTRALRVDKLTLA  325 (454)
T ss_pred             cccchhccCCCCcccccHhH-cCCCEEEecCccccCCC--eEEEEEECHHHH--------HhhhhchhHHHHhhChHHHH
Confidence            21100     0111111110 11128999999998645  479999988773        22211111000012122222


Q ss_pred             HHHHhcc-----------cccHHHHHHHHHHHHHHHHHHHHHHHhC---CC--eEecCC----C---------ceEEEee
Q 036024          165 GGLACLS-----------SEGLEAVHSVVDYYKENTKILIDTLASL---GI--KVYGGI----N---------APYVWAH  215 (272)
Q Consensus       165 a~~~~l~-----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~--~~~~~~----~---------~~~~~i~  215 (272)
                      +..+.+.           ....+.+....+..++++..+.+.|+..   ++  ++....    +         +..+.+.
T Consensus       326 ~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~  405 (454)
T TIGR00474       326 ALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLT  405 (454)
T ss_pred             HHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEe
Confidence            2222221           1122344555567778888888888763   33  332211    1         2223333


Q ss_pred             cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHH
Q 036024          216 FPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRL  268 (272)
Q Consensus       216 l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l  268 (272)
                      ..+....++. +.+++....|..-     ...+.+.+.+. ..++|++.++++|
T Consensus       406 ~~~~~~~~l~-~~lr~~~~~ii~r-----~~~~~~~ld~r~~~~~~~~~~~~~~  453 (454)
T TIGR00474       406 PDGLSAEKLE-ARLRELPPPIIGR-----IEDDRFLLDLRTLLEDEEELLIEAL  453 (454)
T ss_pred             cCCCCHHHHH-HHHhcCCCCEEEE-----EECCEEEEEeCcCCHHHHHHHHHHh
Confidence            3343444544 4556655433321     12567777764 3778888877765

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=98.93  E-value=2e-10  Score=95.15  Aligned_cols=176  Identities=16%  Similarity=0.118  Sum_probs=101.5

Q ss_pred             cc-eeEEeecCCCCCcccC-CCC--------CCCceEEEEecCCCc-cccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024           22 YC-NIEYLECGPGNNFFPD-LKG--------TSRTDIIFFCSPNNP-TGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY   90 (272)
Q Consensus        22 ~g-~~~~~~~~~~~~~~~d-l~~--------~~~~~~i~~~~p~np-tG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~   90 (272)
                      .| ++++++.+.++.+.++ ++.        .+++++|++++|+|. -|++++.+++++|.++|+++|+.++.|.+.-+-
T Consensus        91 ~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~  170 (290)
T PF01212_consen   91 SGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLAN  170 (290)
T ss_dssp             TTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHH
T ss_pred             cCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHH
Confidence            56 8888888764455554 222        257899999999876 488999999999999999999999999997543


Q ss_pred             ccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHH-----HH
Q 036024           91 VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ-----AG  165 (272)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~a  165 (272)
                      .......++.++....|  ++..|++|.+|+++  -+.++.+++++..     ...+.+...........+..     .+
T Consensus       171 a~~~~~~~~~e~~~~~D--~v~~~~tK~~g~~~--Gavl~~~~~~i~~-----~~~~~k~~gg~~~~~G~~~a~~~~~~~  241 (290)
T PF01212_consen  171 AAAALGVSLAEIAAGAD--SVSFGGTKNGGAPG--GAVLAGNKEFIAK-----ARRQRKRLGGGMRQAGVLAAAELYQFA  241 (290)
T ss_dssp             HHCHHHHHHHHHHTTSS--EEEEETTSTT-SSS--EEEEEESHHHHHH-----HHHHHHHHTHHHHHTTHHHHHHHHHHH
T ss_pred             hhhcccccHHHHhhhCC--EEEEEEEccccccc--ceEEEechHHHHH-----HHHHHHHhccCeeecceeeeechhhHH
Confidence            32211234444432333  55668999998765  2455566665321     11111111111100111211     12


Q ss_pred             HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceE
Q 036024          166 GLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPY  211 (272)
Q Consensus       166 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~  211 (272)
                      +...++ ..    .....+-.++.+.+.+.|+.+|..+..+..++.
T Consensus       242 ~l~~l~-~~----~~~~~~~~~~A~~La~~l~~~~~~~~~~~~tn~  282 (290)
T PF01212_consen  242 ALRALE-LW----LERARHANAMAKRLAAGLEALGGVLPRPVETNQ  282 (290)
T ss_dssp             HHCHEE-CS----HHHHHCHHHHHHCHHHCHHEECEEEETTSS-HH
T ss_pred             HHHHHH-hh----HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCcE
Confidence            222222 11    445577778899999999998877766655443

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=98.90  E-value=4.9e-09  Score=89.29  Aligned_cols=140  Identities=18%  Similarity=0.202  Sum_probs=90.8

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.++++-.-+...|.. ++++.+++|.++|+++|+++|.||++.++...+.........-.+|.  +  +++|.++ .
T Consensus       176 ~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDi--v--~~gK~l~-g  250 (339)
T PF00202_consen  176 DEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDI--V--TFGKGLG-G  250 (339)
T ss_dssp             GGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSE--E--EEEGGGG-T
T ss_pred             CcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcc--c--ccccchh-h
Confidence            556666665445555654 45677999999999999999999999987655544433444444553  2  3579998 7


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      |+.+|.++.+++.        .+.+......++.+.++++..++.+.++....   +...++.+++.++|++.|+++
T Consensus       251 G~p~sav~~~~~i--------~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~---~~~~~~~~~~g~~l~~~L~~l  316 (339)
T PF00202_consen  251 GLPISAVLGSEEI--------MEAFQPGSHGSTFGGNPLSCAAALATLEILEE---EDLLERVRELGERLREGLREL  316 (339)
T ss_dssp             TSSEEEEEEEHHH--------HTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcccccccchh--------hccccccccccccccchHhhhhhhhHHHhhcc---HHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999988        33333333445555788888888888873222   224445555555555555543

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=98.89  E-value=3.1e-07  Score=75.93  Aligned_cols=234  Identities=17%  Similarity=0.124  Sum_probs=147.2

Q ss_pred             EEeecCCCCCc-ccC-CCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCCCCc
Q 036024           26 EYLECGPGNNF-FPD-LKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCPRSI   99 (272)
Q Consensus        26 ~~~~~~~~~~~-~~d-l~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~~~~   99 (272)
                      .|+.+++..|+ +.| +++   +=++|+|+.=...++  ..++   -.++.++|.+.+++++.|.+|. +++..+.-++.
T Consensus       165 mPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~SaY~--R~~D---YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsP  239 (477)
T KOG2467|consen  165 MPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSAYS--RLID---YARFRKIADKVGAYLMADMAHISGLVAAGVIPSP  239 (477)
T ss_pred             CceeeCCCCCceehHHHHHHHHhcCCcEEEeccccch--hhcc---HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCc
Confidence            46666666453 333 443   246777776433333  2333   5677778888999999999995 66666655555


Q ss_pred             cccCCCCCceEEEecCccccCCCccceeEEEecccccccC-------CcchHHHHHhhh-hhccCCcchHHHHHHHHhcc
Q 036024          100 YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS-------GFPVINDFNRII-CTCFNGASNIAQAGGLACLS  171 (272)
Q Consensus       100 ~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~  171 (272)
                      .+.-   |  |+..+-+|.+  .|-|-|.+.-..-.....       .-.+.+.+.... .....++....+.+++-+|.
T Consensus       240 Fey~---D--iVTTTTHKsL--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALk  312 (477)
T KOG2467|consen  240 FEYC---D--IVTTTTHKSL--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALK  312 (477)
T ss_pred             cccc---c--eeeccccccc--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHH
Confidence            5542   2  8888999987  566667766544332111       111222333222 22233455555565666665


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCC---CC
Q 036024          172 SEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGP---GG  246 (272)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~  246 (272)
                      ....-..++..+++.+|.+.|.+.|.+.|.++... .+...+.+++. ...+...++..++..+|.++--..++.   -.
T Consensus       313 Qa~tpefk~Yq~qV~~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~  392 (477)
T KOG2467|consen  313 QAMTPEFKEYQKQVLKNAKALASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALS  392 (477)
T ss_pred             hhCCHHHHHHHHHHHHHHHHHHHHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccC
Confidence            44445558889999999999999999999998653 34556777886 223456678888888998865554542   23


Q ss_pred             CCeEEEEc-c-C----CHHHHHHHHHHHHHh
Q 036024          247 EEYIRISG-F-G----HRESILEASRRLEAL  271 (272)
Q Consensus       247 ~~~~R~s~-~-~----~~~~i~~~l~~l~~~  271 (272)
                      ++.+|++. . +    .++||.+..+-|.++
T Consensus       393 PgGiRiGtPAmTsRG~~e~df~~v~~fi~~a  423 (477)
T KOG2467|consen  393 PGGIRIGTPAMTSRGFGEEDFEKVADFIDRA  423 (477)
T ss_pred             CCceeccchhhcccCccHHHHHHHHHHHHHH
Confidence            78899983 1 1    377887777766554

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.88  E-value=5.5e-08  Score=81.41  Aligned_cols=142  Identities=18%  Similarity=0.171  Sum_probs=100.6

Q ss_pred             CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      .+.++++---+...|..+ +++.+..|...|+++++++|.||++.++..-+.......+...+|    +.++.|.+| .|
T Consensus       206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD----I~t~aK~L~-gG  280 (433)
T KOG1401|consen  206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPD----ITTVAKPLG-GG  280 (433)
T ss_pred             ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCc----ceeehhhcc-CC
Confidence            466666665577777654 567799999999999999999999998765554332222333445    337899998 99


Q ss_pred             cceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      +.+|+.+++++.        .+.+..   +....+++.++++..++...+..... +++++..++-++.++.+.+.+...
T Consensus       281 lPigA~~v~~kV--------~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~  352 (433)
T KOG1401|consen  281 LPIGATGVRDKV--------AEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKT  352 (433)
T ss_pred             ceeEEEeehHHH--------HhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            999999999988        344432   33467777888998888888874333 555666666666666666666654

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=98.88  E-value=4.7e-07  Score=82.86  Aligned_cols=206  Identities=12%  Similarity=0.056  Sum_probs=122.6

Q ss_pred             ceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE-EEcccCCccc-cCCCCCCccccC---CCCCceEEEecCccccC
Q 036024           46 TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII-IFDSAYAAYV-TDGCPRSIYEIP---GAREVAIEISSFSKFSG  120 (272)
Q Consensus        46 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v-i~D~~~~~~~-~~~~~~~~~~~~---~~~~~~i~~~s~sK~~g  120 (272)
                      ++++++++|+ .-|.+.+   +++|++.|   ++.+ ++||+|+.+. +.+...+...+.   +.+..++++.|.+|.++
T Consensus       298 p~~vvit~pT-YdGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~  370 (713)
T PRK15399        298 PVHAVITNST-YDGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLA  370 (713)
T ss_pred             ceEEEEECCC-CCceeeC---HHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhcccc
Confidence            3688888885 6699987   66666666   5655 6999998543 222111112221   22233577999999995


Q ss_pred             CCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       121 ~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                       +=.+.+++...... .      .+++........+++++....|++.....-.. ...++..+...+....+++.+...
T Consensus       371 -alTQaS~iHvk~~v-d------~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~  442 (713)
T PRK15399        371 -AFSQASLIHIKGEY-D------EETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRL  442 (713)
T ss_pred             -ccchheeeeecCCC-C------HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence             43445666665432 1      35666666666666777777766666653332 234666777777777788877664


Q ss_pred             -C------CeEecCC-----------------------------CceEEEeecC-----------CCChHHHHHHHHHhc
Q 036024          200 -G------IKVYGGI-----------------------------NAPYVWAHFP-----------GRKSWDVFAEILEKT  232 (272)
Q Consensus       200 -g------~~~~~~~-----------------------------~~~~~~i~l~-----------~~~~~~~~~~ll~~~  232 (272)
                       +      +++..++                             +..=+.+..+           +... ..+.+.|+++
T Consensus       443 ~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g-~~l~~~L~e~  521 (713)
T PRK15399        443 REESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPA-ALVAKFLDER  521 (713)
T ss_pred             cccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccccccCCCCH-HHHHHHHHHc
Confidence             2      3444321                             0011334333           2233 3455556777


Q ss_pred             CeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          233 HITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       233 gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      ||.+.-...+    .-.+-+++..++++++++++.|.++
T Consensus       522 gI~~E~~d~~----~vL~l~s~g~t~~~~~~L~~aL~~f  556 (713)
T PRK15399        522 GIVVEKTGPY----NLLFLFSIGIDKTKAMGLLRGLTEF  556 (713)
T ss_pred             CCEEEecCCC----eEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            9998654432    2344566677999998888887653

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=98.88  E-value=3.1e-07  Score=86.30  Aligned_cols=226  Identities=12%  Similarity=0.074  Sum_probs=133.0

Q ss_pred             HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC   95 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~   95 (272)
                      ..++..| +++.++++       +++..-++.++++.+|| -.|.+.   ++++|++++++.|++++++ +.-  ..-..
T Consensus       172 t~a~~~g~~v~~~~~~-------~l~~~~~~~~v~~q~Pn-~~G~ie---d~~~i~~~~h~~gal~~~~-ad~--~al~l  237 (939)
T TIGR00461       172 TRAKPFGIEVIVVDCS-------DIKKAVDVFGCLLQYPA-TDGSIL---DYKQLIDALHSHKSLVSVA-ADL--MALTL  237 (939)
T ss_pred             HHHHhcCcEEEEEcHH-------HHhhcCCEEEEEEECCC-CCeEEe---cHHHHHHHHHHcCCEEEEE-ech--HHhCC
Confidence            3456778 88887653       23322256677777886 678874   6999999999999999984 221  11111


Q ss_pred             CCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcch-------------------HH-HHHhhh
Q 036024           96 PRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFPV-------------------IN-DFNRII  151 (272)
Q Consensus        96 ~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~~-------------------~~-~~~~~~  151 (272)
                      ..++.++..+    |++++ +|.||.|    |--.|++.+++++.+..=-++                   .+ .+++.+
T Consensus       238 l~~Pge~GaD----i~vg~-~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRek  312 (939)
T TIGR00461       238 LTPPGHYGAD----IVLGS-SQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDK  312 (939)
T ss_pred             cCCHHHcCCc----EEeeC-CCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccc
Confidence            2233333221    55655 4445432    444677777666542100000                   00 111111


Q ss_pred             hhccCCcchHHHHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHH
Q 036024          152 CTCFNGASNIAQAGGLAC--LSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEIL  229 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll  229 (272)
                      .++.. +..-+..|..+.  +...+.+.++++.++...++.++.+.|.+.|+++..+.--.-+.+.++..+..++..+++
T Consensus       313 AtSNI-Ct~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~~fF~~~~v~~~~~~~~~i~~~~~  391 (939)
T TIGR00461       313 ATSNI-CTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINKTWFDTLTVKVGNGISSELLKAAE  391 (939)
T ss_pred             cCcch-hHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCccceEEEEeCCCCHHHHHHHHH
Confidence            11111 111222221112  233455778899999999999999999999998877522122445554345667777776


Q ss_pred             HhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHH
Q 036024          230 EKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLE  269 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~  269 (272)
                      ++ ||.+...      ..+.+++|+  .+|++|++.+++.+.
T Consensus       392 ~~-gi~l~~~------~~~~i~~s~~E~~t~~di~~l~~~~~  426 (939)
T TIGR00461       392 EF-NINLRAV------DTTTVGIALDETTTKADVENLLKVFD  426 (939)
T ss_pred             HC-CCeeeec------CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence            66 9997542      245789997  568999999999884

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=98.87  E-value=3.7e-07  Score=78.77  Aligned_cols=227  Identities=16%  Similarity=0.161  Sum_probs=118.1

Q ss_pred             Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCC
Q 036024           18 EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP   96 (272)
Q Consensus        18 ~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~   96 (272)
                      .+...| +++.++.+++ +...    .+++.++++.+|| -.|.+   +++++|.++++++|+++++ .+.- ... +.-
T Consensus       174 ~a~~~g~~iv~~~~~~~-~~~d----~~~~a~v~vq~Pn-~~G~~---ed~~~i~~~~h~~gal~~~-~ad~-~aL-~~l  241 (429)
T PF02347_consen  174 YAAPLGIEIVEVPLDED-GTTD----DDDTAAVMVQNPN-TFGVF---EDIKEIADIAHAAGALVIV-GADP-NAL-GGL  241 (429)
T ss_dssp             HCCHCCEEEEEE-BBTT-CSB-----STTEEEEEEESS--TTSB-----THHHHHHHHHHTT-EEEE-CGGC-CGC-CTC
T ss_pred             hhhhCCeEEEEeccccc-CCcc----ccCeEEEEeecCC-CCceE---eeHHHHHHHHHHcCCEEEE-ecCH-HHH-hCc
Confidence            556678 9999998765 3332    4789999999998 56877   4499999999999999887 3321 111 213


Q ss_pred             CCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccC------------Ccc-----h--HH-HHHhhhh
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSS------------GFP-----V--IN-DFNRIIC  152 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~------------~~~-----~--~~-~~~~~~~  152 (272)
                      .++.++..+    |++++ +|.||.|    |--.|++.+.+++++..            .++     +  .+ .+++.+.
T Consensus       242 ~~Pge~GAD----I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKA  316 (429)
T PF02347_consen  242 KSPGEYGAD----IVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKA  316 (429)
T ss_dssp             --GGGGT-S----EEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCS
T ss_pred             CChhhcCcc----EEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccch
Confidence            334444322    66877 8887744    55588998888875311            000     0  00 1122222


Q ss_pred             hccCCcchHHH-HHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHH
Q 036024          153 TCFNGASNIAQ-AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILE  230 (272)
Q Consensus       153 ~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~  230 (272)
                      ++...++.... .++...+...+.+.+++..++...++.++.+.|++. +..+..+.---++....+.    ....++++
T Consensus       317 tSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~----~~~~~l~~  392 (429)
T PF02347_consen  317 TSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKD----KEVEELLK  392 (429)
T ss_dssp             TT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS-----HHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCc----HHHHHHHH
Confidence            33322222222 223333444666888999999999999999999997 4333332112234333332    22333554


Q ss_pred             hcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHH
Q 036024          231 KTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRL  268 (272)
Q Consensus       231 ~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l  268 (272)
                      + ++.-.  ..+.....+.+-+++.  .+++|++++++.|
T Consensus       393 ~-~~~~g--l~~~~~~~~~~li~~TE~~t~edid~lv~~f  429 (429)
T PF02347_consen  393 R-GIEGG--LNLRYPDDGALLICVTETRTKEDIDRLVEAF  429 (429)
T ss_dssp             T-T------EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred             H-HHhcC--CCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence            4 44331  1112222447778873  3789999988764

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.86  E-value=6.5e-08  Score=80.45  Aligned_cols=210  Identities=13%  Similarity=0.105  Sum_probs=134.7

Q ss_pred             eEEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCC--CceEEEecCccccCCCc
Q 036024           47 DIIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAR--EVAIEISSFSKFSGFTG  123 (272)
Q Consensus        47 ~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~g~~g  123 (272)
                      +-.++. .---+||...+   +.+|+++..+|...+|+||.++....+..+..+.+..+.+  +.-++++|++-+++..|
T Consensus       234 Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G  310 (467)
T KOG1358|consen  234 RRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG  310 (467)
T ss_pred             eEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC
Confidence            444444 44567899888   9999999999999999999999766665455554443332  44488999999997555


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK  202 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~  202 (272)
                         |+.++..-...      ..++.....-.+...++....|+...+..  .++..++.+.+++....+.+.|+.. ++.
T Consensus       311 ---gFc~G~~~i~~------hQrLSg~~Y~fSAslPp~la~aa~~ai~i--~~~~p~~~~~L~~k~~~~H~~l~~~s~~~  379 (467)
T KOG1358|consen  311 ---GFCAGKSFIAD------HQRLSGSGYCFSASLPPYLAGAAIKAILI--EEWNPEIVQPLRAKVAKFHAALSSNSGFI  379 (467)
T ss_pred             ---ceeecceeeEe------eeeccccceeeeccCchhhhhhHHHHHHH--HhhCcchhhhhhccccccchhhhcCCceE
Confidence               77777443321      12222222212222333333334443331  2333668888999999999999987 788


Q ss_pred             EecCCCceEEEeecCC-----CCh----HHHHHHHHHhcCeEeeCCCCCC----CCCCCeEEEEcc--CCHHHHHHHHHH
Q 036024          203 VYGGINAPYVWAHFPG-----RKS----WDVFAEILEKTHITTVPGSGFG----PGGEEYIRISGF--GHRESILEASRR  267 (272)
Q Consensus       203 ~~~~~~~~~~~i~l~~-----~~~----~~~~~~ll~~~gi~v~~g~~~~----~~~~~~~R~s~~--~~~~~i~~~l~~  267 (272)
                      +.+...++.+.+.+..     .+.    ++++...+.+ |+.+.-...--    ..-+..+|+++.  .++||++++...
T Consensus       380 v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~  458 (467)
T KOG1358|consen  380 VSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAEL  458 (467)
T ss_pred             EecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHH
Confidence            9888788888888863     122    2344555555 77775332221    011457999974  389999999998


Q ss_pred             HHHh
Q 036024          268 LEAL  271 (272)
Q Consensus       268 l~~~  271 (272)
                      +++.
T Consensus       459 ik~~  462 (467)
T KOG1358|consen  459 IKEV  462 (467)
T ss_pred             HHHH
Confidence            8764

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=98.81  E-value=8.1e-07  Score=75.71  Aligned_cols=221  Identities=15%  Similarity=0.157  Sum_probs=133.9

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH-cCCEEEEcccC
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN-NGSIIIFDSAY   87 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~-~~~~vi~D~~~   87 (272)
                      |....+..+ ++..+|+++. .+..|+.+     .+++.+++.+-|+.|+|..   +++++|.++..+ +++.+.+|.+-
T Consensus       183 ~eK~a~yf~v~l~~V~~~~~-~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~  258 (491)
T KOG1383|consen  183 FEKAARYFEVELREVPLDEG-DYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACL  258 (491)
T ss_pred             HHHHHhhEEEEEEeeecccc-ceEecHHHHHHHhccceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccC
Confidence            556666677 8999999874 88888665     3788999999999999988   789999999988 99999999999


Q ss_pred             CccccCCCCCCccccC-CCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHHHhhhhhccCCcchHHHHH
Q 036024           88 AAYVTDGCPRSIYEIP-GAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNRIICTCFNGASNIAQAG  165 (272)
Q Consensus        88 ~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  165 (272)
                      +.|...-.......++ +.+...-.-.+-+| +|+.---+||++=++.. ...++....+.......+.+...|..+..+
T Consensus       259 GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~v  337 (491)
T KOG1383|consen  259 GGFINPAGYLNEEEFDFRVPGVTSISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQV  337 (491)
T ss_pred             ccccccccccCccccccCCCCceeEeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHH
Confidence            9887641111221221 11111112223356 44332236886654433 222222223333333333222223233222


Q ss_pred             HHHhcc--cccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCC
Q 036024          166 GLACLS--SEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGF  242 (272)
Q Consensus       166 ~~~~l~--~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~  242 (272)
                      +..+..  ..+++...+..+++.+..+.+++.+++. ++.+.+...-.++...-...+.-++ ..++++.|--+. +..+
T Consensus       338 a~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~i~el-sd~l~~~GW~ln-alq~  415 (491)
T KOG1383|consen  338 AAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVNIFEL-SDLLRKKGWILN-ALQF  415 (491)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccchhhh-hHHHHhcCcCcc-ccCC
Confidence            332222  3556777888999999999999999998 8888886443333333334344444 445566587774 4433

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=98.78  E-value=9.4e-07  Score=72.14  Aligned_cols=209  Identities=13%  Similarity=0.120  Sum_probs=132.3

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~  122 (272)
                      .++.++++++.|+-||+.++   +.+|-+++++++++++.|=+|+-...   +..+.....    -+-+++--|-+. -|
T Consensus       165 dd~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGav---p~~Lh~~ga----DfaigcsyKYLNgGP  234 (407)
T COG3844         165 DDVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAV---PVDLHAAGA----DFAIGCSYKYLNGGP  234 (407)
T ss_pred             cceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCc---ceeecccCC----CeeeeeeceeccCCC
Confidence            67889999999999999987   89999999999999999999985221   223333322    267777778663 25


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhh---------------hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHH
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRII---------------CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKE  187 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  187 (272)
                      |. .+++.+.+...+.....+..-|....               .....+.+..+..++...|.....-.+.+.|++--.
T Consensus       235 Ga-pa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSla  313 (407)
T COG3844         235 GA-PAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLA  313 (407)
T ss_pred             CC-ceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhH
Confidence            43 44555555543333332222221111               111122344444444444442223347889999999


Q ss_pred             HHHHHHHHHHhC----CCeEecCCC----ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc---cC
Q 036024          188 NTKILIDTLASL----GIKVYGGIN----APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG---FG  256 (272)
Q Consensus       188 ~~~~l~~~L~~~----g~~~~~~~~----~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~---~~  256 (272)
                      ..++|.+.++..    ++++..|.+    |..+.+..+  ...+....|.++ ||..-      ...++.+||.+   ++
T Consensus       314 LTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--~~~~V~qaLi~r-GVigD------~R~P~vlRfgftPlY~  384 (407)
T COG3844         314 LTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP--HGYQVMQALIDR-GVIGD------FREPDVLRFGFTPLYV  384 (407)
T ss_pred             HHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC--cHHHHHHHHHHc-Ccccc------ccCCCeeeecCcccee
Confidence            999999999875    677766543    667777776  344555555555 98642      22367899995   56


Q ss_pred             CHHHHHHHHHHHHHhC
Q 036024          257 HRESILEASRRLEALF  272 (272)
Q Consensus       257 ~~~~i~~~l~~l~~~l  272 (272)
                      +-+|+=.+++.|.++|
T Consensus       385 ~~~DVw~AV~~L~evL  400 (407)
T COG3844         385 SFVDVWDAVDALEEVL  400 (407)
T ss_pred             chhHHHHHHHHHHHHH
Confidence            7778777777776653

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=98.67  E-value=3.3e-07  Score=79.00  Aligned_cols=203  Identities=13%  Similarity=0.091  Sum_probs=117.1

Q ss_pred             cccccCccc--chHHhcccc-eeEEeecCCCCCcccC-CCCC-------CCce-EEEEecCCCccccCCCHHHHHHHHHH
Q 036024            6 SVIVGQAGD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKGT-------SRTD-IIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         6 ~~~~~~~~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~-------~~~~-~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      +++.+...+  ....+.-+| .++.+|.++++.+.++ +++.       ..+- +|+.+..+..||.+   +++++|.++
T Consensus       143 ~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~---D~l~~i~~i  219 (373)
T PF00282_consen  143 VIYVSEQAHYSIEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI---DPLEEIADI  219 (373)
T ss_dssp             EEEEETTS-THHHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB----SHHHHHHH
T ss_pred             ccccccccccHHHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccc---cCHHHHhhh
Confidence            344444344  557778889 9999999985444444 3321       1222 45556779999998   779999999


Q ss_pred             HHHcCCEEEEcccCCcccc-CCCCCC-ccccCCCCCceEEEecCccccCCCccceeEEEeccccc-ccCCcchHHHHHhh
Q 036024           74 ARNNGSIIIFDSAYAAYVT-DGCPRS-IYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL-FSSGFPVINDFNRI  150 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~-~~~~~~-~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~-~~~~~~~~~~~~~~  150 (272)
                      |+++++++.+|.+|++... .+.... ...+   +.-.-+.-+++|.++ ....+|+++..+... ......-.+.+...
T Consensus       220 ~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi---~~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~  295 (373)
T PF00282_consen  220 CEKYNIWLHVDAAYGGSALLSPEYRHLLFGI---ERADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGND  295 (373)
T ss_dssp             HHHCT-EEEEEETTGGGGGGHCTTGGGGTTG---GGESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S
T ss_pred             ccccceeeeeccccccccccccccccccccc---ccccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhccc
Confidence            9999999999999997222 121111 2222   211133447899998 446789988877652 11110000111100


Q ss_pred             ---------hhhccCCcchHHHHHHHH--hcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeec
Q 036024          151 ---------ICTCFNGASNIAQAGGLA--CLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHF  216 (272)
Q Consensus       151 ---------~~~~~~~~~~~~~~a~~~--~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l  216 (272)
                               ....+...+. ...++..  .++..+.+.+.++.++..+.++++.+.|++. ++++..+.....+.+++
T Consensus       296 ~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~  372 (373)
T PF00282_consen  296 DRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY  372 (373)
T ss_dssp             -SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred             ccccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence                     0011111222 3333333  3334555778999999999999999999998 68887766666666554

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=98.65  E-value=1.8e-06  Score=74.50  Aligned_cols=203  Identities=15%  Similarity=0.134  Sum_probs=124.1

Q ss_pred             CCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc-cc-------CCCCCCcccc----CCCCCceEEEecCccccCCC
Q 036024           55 NNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY-VT-------DGCPRSIYEI----PGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        55 ~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~-~~-------~~~~~~~~~~----~~~~~~~i~~~s~sK~~g~~  122 (272)
                      |.--|+.+|.+.++++.++|++||+.++.|.+-.+- .+       .-...++.++    ....|  .+..|+||.+|+|
T Consensus       194 N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aD--svt~slsKglgAp  271 (467)
T TIGR02617       194 NSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYAD--MLAMSAKKDAMVP  271 (467)
T ss_pred             ecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCC--EEEEEcCCCCCCc
Confidence            444688999999999999999999999999876531 21       1113444433    12233  5566899999977


Q ss_pred             -ccceeEEEecccccccCCcchHHHHHhhh-----hhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHH
Q 036024          123 -GVRLGWTVVPEELLFSSGFPVINDFNRII-----CTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDT  195 (272)
Q Consensus       123 -g~r~G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~  195 (272)
                       |   |+++++++.+.+    +........     ..+..+.+.--..|++.-|.+... +++..+    -...++|.+.
T Consensus       272 vG---g~Lag~d~~~~~----l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~r----i~qv~yl~~~  340 (467)
T TIGR02617       272 MG---GLLCFKDDSFFD----VYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYR----INQVQYLVNG  340 (467)
T ss_pred             cc---ceEEecchhHHH----HHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHH----HHHHHHHHHH
Confidence             5   677777762100    111211111     122334555555555545553322 333333    3445788899


Q ss_pred             HHhCCCeEecCCCceEEEeec----C-----CCChHHHHHHHHHhcCeEeeCCCCCC----CC-------CCCeEEEEcc
Q 036024          196 LASLGIKVYGGINAPYVWAHF----P-----GRKSWDVFAEILEKTHITTVPGSGFG----PG-------GEEYIRISGF  255 (272)
Q Consensus       196 L~~~g~~~~~~~~~~~~~i~l----~-----~~~~~~~~~~ll~~~gi~v~~g~~~~----~~-------~~~~~R~s~~  255 (272)
                      |.+.|+.+.. .+|..++++-    |     .-....+..+|-.+.||...--..+.    +.       .-..+|+++-
T Consensus       341 L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~Rlaip  419 (467)
T TIGR02617       341 LEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIP  419 (467)
T ss_pred             HHhCCCcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccc
Confidence            9999998887 6888887753    2     23455677888888888743322221    11       1367999972


Q ss_pred             ---CCHHHHHHHHHHHHHh
Q 036024          256 ---GHRESILEASRRLEAL  271 (272)
Q Consensus       256 ---~~~~~i~~~l~~l~~~  271 (272)
                         -|.++++...+++..+
T Consensus       420 Rrvyt~~h~d~v~~~~~~~  438 (467)
T TIGR02617       420 RATYTQTHMDFIIEAFKHV  438 (467)
T ss_pred             cccccHhHHHHHHHHHHHH
Confidence               2778888887777653

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=98.60  E-value=1.3e-05  Score=68.09  Aligned_cols=254  Identities=13%  Similarity=0.092  Sum_probs=149.0

Q ss_pred             ccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      .|+|++.-.+ ....++..| ++|+++.++++..++| ++.  .+++.+++++||| -.|.  -.+++.+|+++.+++|.
T Consensus       159 ~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPs-T~Gv--FE~~I~ei~~ivH~~Gg  235 (496)
T COG1003         159 ICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPS-TLGV--FEEDIREICEIVHEAGG  235 (496)
T ss_pred             EEEeeccccCCChhhHhhcCceEEEEecCCCCCccHHHHHHHhccceeEEEeccCc-cccc--chhhHHHHHHHHHHcCC
Confidence            3444444333 667778889 9999999988777666 333  3788899998887 3453  45889999999999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcch-----HHHHH--
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFPV-----INDFN--  148 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~~-----~~~~~--  148 (272)
                      .++.|.+.-.-..+-  .....+.   -. |+=--++|+|+.|    |--+|=+.+...+.. .++.-     ...+.  
T Consensus       236 ~vY~DGANlNA~vG~--~rPGd~G---~D-V~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~p-fLP~p~~~~~~~~y~~~  308 (496)
T COG1003         236 QVYYDGANLNAIVGL--ARPGDMG---FD-VVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAP-FLPGPVVYHDVGEYRLD  308 (496)
T ss_pred             EEEecCcchhhhhcc--ccccccc---cc-eEEeecccccccCCCCCCCCCCceehHhhccc-cCCCCcccCCCcccccc
Confidence            999999986433221  1111221   11 3333468887533    333565665544421 11110     00000  


Q ss_pred             --h----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCce-EEEeecC---
Q 036024          149 --R----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAP-YVWAHFP---  217 (272)
Q Consensus       149 --~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~i~l~---  217 (272)
                        .    .+...++ .+......+...+..-+.+.+++.-+.---+++++.+.|+.. .+.+.+..... =+.+...   
T Consensus       309 ~~~~~s~g~~~a~~-Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~HE~ild~r~l~  387 (496)
T COG1003         309 YDGKKSIGVSAAPY-GSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRVAHECILDARPLK  387 (496)
T ss_pred             CCCCccceeecccc-CcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCccccCCCCcceeEEEeechHhH
Confidence              0    0111222 233333334444454555666777777777889999999973 22222211111 1334443   


Q ss_pred             ---CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          218 ---GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       218 ---~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                         +....++.++|++- |+.. |--+|...-.+.+-+=.  +.+++++|++++++.++
T Consensus       388 ~~~Gv~~~DvAKrLlD~-GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I  444 (496)
T COG1003         388 KETGVRALDVAKRLLDY-GFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAI  444 (496)
T ss_pred             hhcCCcHHHHHHHHHhc-CCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHH
Confidence               56788899998866 9876 44445422245555543  34688999999888764

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=98.47  E-value=2e-06  Score=71.63  Aligned_cols=185  Identities=12%  Similarity=0.136  Sum_probs=104.6

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHc--CCEEEEcccCC
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNN--GSIIIFDSAYA   88 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~--~~~vi~D~~~~   88 (272)
                      .+.++.+| ....+++.+++.+..| +++  .+++|++++. +-.+.+=-.++.+++++++++.++.  ++++++|.+|+
T Consensus       121 ~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYG  200 (403)
T PF06838_consen  121 PGSLKEFGIKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYG  200 (403)
T ss_dssp             SSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTT
T ss_pred             CCChHHhCceeEEEeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence            34567889 9999999988777666 332  2789999998 6666677778999999999999775  89999999999


Q ss_pred             ccccCCCCCCccccCCCCCceEEEecCccccCCCcc--ceeEEEecccccccCCcchHHHHHhhhhhccCC-cchHHHHH
Q 036024           89 AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV--RLGWTVVPEELLFSSGFPVINDFNRIICTCFNG-ASNIAQAG  165 (272)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~--r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a  165 (272)
                      .|+-...|..   ...+    ++.||+-|+.| .|+  --||+++..++        ++...........+ --..+..-
T Consensus       201 EFvE~~EP~~---vGAD----l~aGSLIKNpG-GgiAptGGYIaGr~~l--------Ve~~a~RLTaPGiG~e~G~t~~~  264 (403)
T PF06838_consen  201 EFVETQEPTE---VGAD----LMAGSLIKNPG-GGIAPTGGYIAGRKDL--------VERAAYRLTAPGIGKEVGATLGT  264 (403)
T ss_dssp             TTTSSS-GGG---GT-S----EEEEETTSGGG-TTT-SS-EEEEESHHH--------HHHHHHHHS-TTTGGGSS--TTT
T ss_pred             eeccccCccc---cchh----heeccceeCCC-CCccCcCCEEechHHH--------HHHHHhhhcCCccccccccCcch
Confidence            9875543332   2112    99999999887 322  24999999998        44444333211110 00000000


Q ss_pred             HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC----CceEEEeecCC
Q 036024          166 GLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI----NAPYVWAHFPG  218 (272)
Q Consensus       166 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~i~l~~  218 (272)
                      ...+++ .. -....+...--+-+......++++|+++.+..    .-.+..+.+..
T Consensus       265 ~R~~~Q-Gl-FlAP~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~~  319 (403)
T PF06838_consen  265 NRLMFQ-GL-FLAPHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELGS  319 (403)
T ss_dssp             HHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-SS
T ss_pred             HHHHHh-HH-hhchHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECCC
Confidence            111111 11 11234444444555666667788899987743    23567777763

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=98.30  E-value=3.7e-05  Score=62.32  Aligned_cols=200  Identities=15%  Similarity=0.160  Sum_probs=124.1

Q ss_pred             cCCCccccCCCHHH-HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEe
Q 036024           53 SPNNPTGHAATQNQ-LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV  131 (272)
Q Consensus        53 ~p~nptG~~~~~~~-l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~  131 (272)
                      +-+.-.|+++|+.. .+++++..+.+|.+.|.||+..+|..-|......+.   ++.+--+-++.|-+| .|..++.++.
T Consensus       217 slQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~---y~fiPDIVtmgKpmG-NGhPVa~Vat  292 (452)
T KOG1403|consen  217 SLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQT---YNFIPDIVTMGKPMG-NGHPVAAVAT  292 (452)
T ss_pred             HHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhh---hccccchheecccCC-CCCeeeEEec
Confidence            55778899888776 699999999999999999999876655443222222   122223347899999 9999999888


Q ss_pred             cccccccCCcchHHHHHh--hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCC
Q 036024          132 PEELLFSSGFPVINDFNR--IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGI  207 (272)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~  207 (272)
                      .++.        ...+..  .....+++.++.+.++..+++..-..   +.+.++-++.-+.+...|.++  -.++.+.-
T Consensus       293 tkeI--------A~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~---E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDv  361 (452)
T KOG1403|consen  293 TKEI--------AQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCED---ENLQEHAQQVGEKLEVLLRRLKQKHECIGDV  361 (452)
T ss_pred             cHHH--------HHHhccccceehhccCCCchhHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHhhhccceecc
Confidence            8877        444433  22445667888888888888874333   334444444455555555544  23344432


Q ss_pred             --CceEEEeecCC---------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHh
Q 036024          208 --NAPYVWAHFPG---------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEAL  271 (272)
Q Consensus       208 --~~~~~~i~l~~---------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~  271 (272)
                        -|.|+-+++-.         ........+|-+.++|.+..-.   | ..+.+.|-  ++-++++.++.+..|+++
T Consensus       362 RGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDG---P-h~NilKiKPPmCFneena~e~v~~ld~i  434 (452)
T KOG1403|consen  362 RGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADG---P-HRNILKIKPPMCFNEENADEFVLGLDEI  434 (452)
T ss_pred             ccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCC---C-CCceeecCCCcccChhhHHHHHHHHHHH
Confidence              36677676621         1223356677788889885422   2 24445554  233566666655555544

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=98.28  E-value=3.9e-05  Score=63.53  Aligned_cols=197  Identities=15%  Similarity=0.159  Sum_probs=111.1

Q ss_pred             eEEEEecC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCc--cccCCCCCceEEEecCccccCCC
Q 036024           47 DIIFFCSP-NNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSI--YEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        47 ~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      -+-+++-| +...|. --|++..++|.++|++|++.+|+||++.+....|..-.-  ..++..+|    +-+|||-+- .
T Consensus       272 VaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD----~vTFSKK~q-~  346 (484)
T KOG1405|consen  272 VAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPD----VVTFSKKFQ-T  346 (484)
T ss_pred             eEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCcc----ceehhhhhh-c
Confidence            33444445 555553 357788999999999999999999999875444432211  12222223    337999884 6


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG--  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--  200 (272)
                      |   || .-.+++.-      -+.++.+-  ++.+-+.-. ..+.++++....   +.+.++.+..-+.|..+|.++.  
T Consensus       347 g---Gf-fh~~~frp------n~pYrifN--TWmGdP~k~-lll~~vv~~I~~---~~Ll~n~~~vG~~l~~gL~~Lq~~  410 (484)
T KOG1405|consen  347 G---GF-FHDEEFRP------NEPYRIFN--TWMGDPSKN-LLLEEVVQEIKR---EDLLNNVAHVGKALLKGLLELQAK  410 (484)
T ss_pred             C---cc-ccCcccCC------CchHHHhh--hhcCChHHH-HHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5   65 33333311      12333222  222222221 112333332221   5566667777777888887752  


Q ss_pred             ----CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHh
Q 036024          201 ----IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEAL  271 (272)
Q Consensus       201 ----~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~  271 (272)
                          +.-... .|.|+..+++.....+.+...++..|+.+..   |+   ...+||-  +.-++...+-+++++.+.
T Consensus       411 ~p~~~~~~RG-rGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GG---Cg---~~siRfRPsLvf~~~Ha~i~l~~~~k~  480 (484)
T KOG1405|consen  411 YPGKINNLRG-RGTFIAWDCPSGSIRDKLILIARLNGVNLGG---CG---DKSIRFRPSLVFRKHHADIFLDIFDKI  480 (484)
T ss_pred             Cchhhhcccc-cceEEEEeCCChHHHHHHHHHHHHcCceecc---cc---cceeeeccceeehhhhHHHHHHHHHHH
Confidence                222232 5788989999655566666677777888742   32   3345555  433565666666666654

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=98.24  E-value=4.8e-05  Score=63.22  Aligned_cols=215  Identities=16%  Similarity=0.196  Sum_probs=128.8

Q ss_pred             CCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc----cccCCC----CCCccccC----CCCCceE
Q 036024           44 SRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA----YVTDGC----PRSIYEIP----GAREVAI  110 (272)
Q Consensus        44 ~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~----~~~~~~----~~~~~~~~----~~~~~~i  110 (272)
                      .++..|+++ ..|...|+-.|-+.++++.++|++|++.++.|.+...    |.-...    ..++.++.    ...|  -
T Consensus       184 ~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD--~  261 (471)
T COG3033         184 DNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD--G  261 (471)
T ss_pred             ccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh--h
Confidence            456667776 7788999999999999999999999999999976531    111100    12222220    0111  1


Q ss_pred             EEecCccccCC-CccceeEEEecccccccCCcchHHHHHhhh-----hhccCCcchHHHHHHHHhccccc-HHHHHHHHH
Q 036024          111 EISSFSKFSGF-TGVRLGWTVVPEELLFSSGFPVINDFNRII-----CTCFNGASNIAQAGGLACLSSEG-LEAVHSVVD  183 (272)
Q Consensus       111 ~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~  183 (272)
                      ..-|.-|..-. -|   |+++..++..++    +....+-..     ..+..+.+.-...+++.-|.+.. ..|+..+..
T Consensus       262 ~~mS~KKD~lvnmG---Gfl~~~D~~~fD----vy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~  334 (471)
T COG3033         262 CTMSAKKDGLVNMG---GFLCFKDDSFFD----VYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVA  334 (471)
T ss_pred             heeeccccceeccc---cEEEecCccHHH----HHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHH
Confidence            23355563311 23   777777764211    111111111     12333344444555555554332 255555554


Q ss_pred             HHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC---------CCChHHHHHHHHHhcCeEeeCCCCCCCC---------
Q 036024          184 YYKENTKILIDTLASLGIKVYGGINAPYVWAHFP---------GRKSWDVFAEILEKTHITTVPGSGFGPG---------  245 (272)
Q Consensus       184 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~---------~~~~~~~~~~ll~~~gi~v~~g~~~~~~---------  245 (272)
                      |    .++|.++|++.|+.+..|.+|.-++++..         .-..+.+..+|.++.||...--..|...         
T Consensus       335 Q----v~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~  410 (471)
T COG3033         335 Q----VQYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQH  410 (471)
T ss_pred             H----HHHHHHHHHhcCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccC
Confidence            4    46788999999999998888988888753         1245567788889999988655555311         


Q ss_pred             --CCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          246 --GEEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       246 --~~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                        ....+|+++-   -|.+.++...+.++++
T Consensus       411 ~~~~elvRltipRrtYt~~HmD~V~~a~~~l  441 (471)
T COG3033         411 PPPAELVRLTIPRRTYTQTHMDFVIEAFKAL  441 (471)
T ss_pred             CCchheeeEeccccccchhHHHHHHHHHHHH
Confidence              1257999972   2677777777666543

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=98.10  E-value=0.00019  Score=63.77  Aligned_cols=152  Identities=14%  Similarity=0.097  Sum_probs=96.0

Q ss_pred             CCCc-eEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           43 TSRT-DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        43 ~~~~-~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      .+.. |+++++||+ --|.+..   +++|.+.+.++++++.+|++|..........+-...  ....+++..|.+|.++ 
T Consensus       163 ~~~~~k~~vitnpT-YdGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~--~~~~~~~tqS~HK~l~-  235 (557)
T COG1982         163 HPDAEKLAVITNPT-YDGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESAL--NGGADFVTQSTHKLLA-  235 (557)
T ss_pred             ChhhheeEEEecCc-cceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccCcchhh--hcCceEEEechhhhhh-
Confidence            3566 889998887 4588877   888888898999999999999743222211111111  1344699999999996 


Q ss_pred             CccceeEEEeccc-ccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH----HHHHHHHHHHHHHHHHHHHHH
Q 036024          122 TGVRLGWTVVPEE-LLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL----EAVHSVVDYYKENTKILIDTL  196 (272)
Q Consensus       122 ~g~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~L  196 (272)
                      +..+..++...+. .+.      .+++........++++.....|++.+.+....    +..++..+..-+.++.+++..
T Consensus       236 alSQaS~iHv~~~~~~~------~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~  309 (557)
T COG1982         236 ALSQASMIHVKDGRAVN------HERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLI  309 (557)
T ss_pred             hhhhhHHHhhCCCccCC------HHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            6555666666652 211      45666666666666777777777777442222    222223444455556666666


Q ss_pred             HhC-CCeEecCC
Q 036024          197 ASL-GIKVYGGI  207 (272)
Q Consensus       197 ~~~-g~~~~~~~  207 (272)
                      .+. ++.+..+.
T Consensus       310 ~~~~~~~~~~~~  321 (557)
T COG1982         310 NEIGFFPVLQPE  321 (557)
T ss_pred             HhcCCeeecccc
Confidence            665 56665543

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=98.03  E-value=0.0028  Score=54.23  Aligned_cols=231  Identities=16%  Similarity=0.195  Sum_probs=128.2

Q ss_pred             HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD   93 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~   93 (272)
                      ..++-.| +++.++.++..    |++.  ..++-.+++.+|+ -.|.  ...++++|.+.++.+++++++=   .+    
T Consensus       183 Tra~~~g~~i~~~~~~d~~----~l~~~~~~~~~gv~vQyP~-~~G~--~~~d~~~l~~~~h~~~al~~v~---aD----  248 (450)
T COG0403         183 TRAEGLGIEIEVVDADDLD----DLESADDGDVFGVLVQYPN-TFGI--VEEDLRALIEAAHSAGALVIVA---AD----  248 (450)
T ss_pred             hhcccCceEEEEeccchhh----hhhhccccCeEEEEEecCC-CCCc--cchhHHHHHHHHhhcCCEEEEE---ec----
Confidence            4445566 77777766221    1222  3577888988888 5562  2367999999999999887752   11    


Q ss_pred             CCCCCccccCCCCCceEEEecCccc---cCCCccceeEEEecccccccC-----------------CcchHH---HHHhh
Q 036024           94 GCPRSIYEIPGAREVAIEISSFSKF---SGFTGVRLGWTVVPEELLFSS-----------------GFPVIN---DFNRI  150 (272)
Q Consensus        94 ~~~~~~~~~~~~~~~~i~~~s~sK~---~g~~g~r~G~~~~~~~~~~~~-----------------~~~~~~---~~~~~  150 (272)
                      +-...+...++..+--|++|+.+..   +|+.|-.+||+.+.+++.+..                 ...+..   .+++-
T Consensus       249 plaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRRe  328 (450)
T COG0403         249 PLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRRE  328 (450)
T ss_pred             hhHhhccCCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhh
Confidence            1011122222222223888887652   233466788888887775210                 011111   11222


Q ss_pred             hhhccCCcchHHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCCCceE--EEeecCCCChHHH
Q 036024          151 ICTCFNGASNIAQAGGLACL--SSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPY--VWAHFPGRKSWDV  224 (272)
Q Consensus       151 ~~~~~~~~~~~~~~a~~~~l--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~--~~i~l~~~~~~~~  224 (272)
                      +.++...++.. ..|..+.+  .-.+.+.++++.++..++..++.+.|++.  |+++...  .+|  +.++++......+
T Consensus       329 KATSNICTnQa-LlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~~~~~~l  405 (450)
T COG0403         329 KATSNICTNQA-LLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPEEVAEAL  405 (450)
T ss_pred             ccchhhhHHHH-HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecchhHHHHH
Confidence            22222222221 11111111  13455788999999999999999999966  5777764  444  4455543122222


Q ss_pred             HHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          225 FAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      ..+ ....|+.+..-      ...++=+++  ..++++++.+++.+...
T Consensus       406 ~~~-~~~~G~~L~~~------~~~~~~ia~tEt~t~~~i~~l~~~~~~~  447 (450)
T COG0403         406 LAA-AIAGGINLRRV------DADTVLIALTETTTKEDIDALVAAFGGV  447 (450)
T ss_pred             HHH-HHhcCCceeee------cCCceEEEeecccCHHHHHHHHHHHhhh
Confidence            222 23336665421      234566776  34789999999888653

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=98.00  E-value=0.00018  Score=60.07  Aligned_cols=201  Identities=12%  Similarity=0.097  Sum_probs=123.8

Q ss_pred             EEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcccee
Q 036024           48 IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLG  127 (272)
Q Consensus        48 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G  127 (272)
                      -+.++..+.-+|+-++.  ...+.     .+.++|.|.+-.-+..   +..+..++      ++..+..|.+|..|  ++
T Consensus       147 yv~~~~NeTi~Gv~v~~--~p~~~-----~~~~~v~D~SS~ilsr---~iDvsk~d------viyagaQKnlGpaG--lt  208 (365)
T COG1932         147 YVHFCWNETISGVEVPE--LPDIG-----SDGLLVADASSAILSR---PIDVSKYD------VIYAGAQKNLGPAG--LT  208 (365)
T ss_pred             EEEEecCCcccceEccC--CCCCC-----CCceEEEecccHHhcC---CCChhHcc------eEEEehhhccCccc--eE
Confidence            36667667777887662  11111     1278888877654321   22233331      77789999999888  78


Q ss_pred             EEEecccccccCCc----chHHHH-HhhhhhccCCcchHHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024          128 WTVVPEELLFSSGF----PVINDF-NRIICTCFNGASNIAQAGGLACLSS-EGLEAVHSVVDYYKENTKILIDTLASLGI  201 (272)
Q Consensus       128 ~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~  201 (272)
                      .++.+++.+.+.-.    ...... ......+.++++..+.+.+...++. .....++.+.++-+++++.|.+.+.+.++
T Consensus       209 vvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~f  288 (365)
T COG1932         209 VVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDF  288 (365)
T ss_pred             EEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            88888888543311    111111 1222456667777777766666652 22245788889999999999999998754


Q ss_pred             eEec----CCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024          202 KVYG----GINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG--HRESILEASRRLEAL  271 (272)
Q Consensus       202 ~~~~----~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~--~~~~i~~~l~~l~~~  271 (272)
                      ....    ..+-+.+.+.+.+. -+..++..+. ++|+..--|+.    -.+.+|+|+++  +.|+++.++.-++.+
T Consensus       289 y~~~v~~~~RS~mnV~f~~~~~~ld~~fv~eae-~~gl~~lkGhr----~vgGmRasiynA~~~e~veaL~~fm~~f  360 (365)
T COG1932         289 YRNLVAKANRSRMNVTFTLVDAELDKGFVAEAE-AAGLIYLKGHR----SVGGLRASIYNAVPLEDVEALTDFMDWF  360 (365)
T ss_pred             cccccchhhccceeEEEEcCcHHHHHHHHHHHH-HcCCceecccc----CCCceeeeeecCCCHHHHHHHHHHHHHH
Confidence            3221    22345677777643 3445555554 44766655631    13559999866  678888888777654

>PRK12566 glycine dehydrogenase; Provisional

Probab=97.96  E-value=0.00089  Score=63.41  Aligned_cols=204  Identities=12%  Similarity=0.078  Sum_probs=118.0

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC---
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG---  120 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g---  120 (272)
                      .++-.+++.+|| -.|.+   +++++|.+++++.|+++++ .+.- +... .-.+..++..    -|++|+ ++.||   
T Consensus       207 ~~~~~v~vq~P~-~~G~i---~d~~~i~~~~h~~gal~~~-~~d~-laL~-ll~~Pge~GA----DI~vG~-~Q~fGvp~  274 (954)
T PRK12566        207 HAVFGALLQYPD-THGEI---RDLRPLIDQLHGQQALACV-AADL-LSLL-VLTPPGELGA----DVVLGS-TQRFGVPM  274 (954)
T ss_pred             CCEEEEEEECCC-CceEE---ccHHHHHHHHHHcCCEEEE-EeCH-HHHh-CCCChhhcCC----cEEeeC-CCcCCCCC
Confidence            367788888887 56877   5699999999999988662 2211 1111 1222333322    266775 34343   


Q ss_pred             -CCccceeEEEeccccccc-----------------CCcchHHH---HHhhhhhccCCcchHHHHHHHHhc-ccccHHHH
Q 036024          121 -FTGVRLGWTVVPEELLFS-----------------SGFPVIND---FNRIICTCFNGASNIAQAGGLACL-SSEGLEAV  178 (272)
Q Consensus       121 -~~g~r~G~~~~~~~~~~~-----------------~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~l-~~~~~~~~  178 (272)
                       ..|--.|++.+.+++.+.                 ....+..+   +++-+.++...++..-...+..+. .-.+.+.+
T Consensus       275 ~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl  354 (954)
T PRK12566        275 GYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGL  354 (954)
T ss_pred             CCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHH
Confidence             235557888887776421                 11111111   122222233222222222222222 12345778


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCeEecCCCceE--EEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--
Q 036024          179 HSVVDYYKENTKILIDTLASLGIKVYGGINAPY--VWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--  254 (272)
Q Consensus       179 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~--~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--  254 (272)
                      ++..++...++.++.+.|.+.|+++...  .+|  +.+.+.. ...++..+.++. ||-++--      +.+.+.+|+  
T Consensus       355 ~~ia~~~~~~a~~l~~~l~~~g~~~~~~--~fF~~~~v~~~~-~~~~~~~~a~~~-~~n~r~~------~~~~~~~s~de  424 (954)
T PRK12566        355 KRIAQRVHRLTAILAAGLEAKGIKRLNR--HFFDTLTLEVGG-AQAAIIESAEAA-RINLRIL------GRGRLGVSLDE  424 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCccccC--CccceEEEEccC-CHHHHHHHHHHC-CCeeEEe------CCCeEEEEeCC
Confidence            8899999999999999999999887654  344  4444421 344555555444 8877532      245788888  


Q ss_pred             cCCHHHHHHHHHHHH
Q 036024          255 FGHRESILEASRRLE  269 (272)
Q Consensus       255 ~~~~~~i~~~l~~l~  269 (272)
                      ..+.+|+..++..+.
T Consensus       425 ~~~~~~~~~~~~~f~  439 (954)
T PRK12566        425 TCDEATVARLFDIFL  439 (954)
T ss_pred             CCCHHHHHHHHHHhc
Confidence            447889999988873

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=97.86  E-value=0.0018  Score=55.15  Aligned_cols=242  Identities=11%  Similarity=0.038  Sum_probs=112.8

Q ss_pred             hcccc-eeEEeecCCCCC-cccCCCC--------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024           19 VGKYC-NIEYLECGPGNN-FFPDLKG--------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA   88 (272)
Q Consensus        19 ~~~~g-~~~~~~~~~~~~-~~~dl~~--------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~   88 (272)
                      ....| +++.+|...+++ ...|++.        -++..+.++++.+---+...  +++++|+++|++||+..++..+|+
T Consensus       118 i~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYg  195 (389)
T PF05889_consen  118 IERAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYG  195 (389)
T ss_dssp             HHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTT
T ss_pred             HHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchh
Confidence            34456 777777654322 2222221        14556777776654444442  469999999999999999999997


Q ss_pred             ccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHH
Q 036024           89 AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLA  168 (272)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  168 (272)
                      -=.. .-...+.........-+++.|.-|.|- -+.--+.+.++.+.       ++...........+..+..-....+.
T Consensus       196 vQ~~-~~~~~i~~a~~~GRvda~vqS~dkNF~-VPvGgai~As~~~~-------~i~~vs~~YpGRas~sp~ld~~itLl  266 (389)
T PF05889_consen  196 VQSS-KCMHLIQQAWRVGRVDAFVQSTDKNFM-VPVGGAIMASFDPS-------GILAVSKEYPGRASASPSLDLFITLL  266 (389)
T ss_dssp             TT-H-HHHHHHHHHHHHSTCSEEEEEHHHHHC-EESSHEEEEESSHH-------HHHHHHHTSHSHBTSHHHHHHHHHHH
T ss_pred             hhHH-HHHHHHHHHHhcCCcceeeeecCCCEE-ecCCCcEEEecCHH-------HHHHHHHHhhhhhhcccchHHHHHHH
Confidence            4000 000000000000111278889999884 32222334444433       24455444433333233333322222


Q ss_pred             hcccccH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCCC------ChHHHHHHHHHhcCeE----e
Q 036024          169 CLSSEGL-EAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPGR------KSWDVFAEILEKTHIT----T  236 (272)
Q Consensus       169 ~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~~------~~~~~~~~ll~~~gi~----v  236 (272)
                      .+-..++ ..+.++.+.+....+.+++.-++.+-++.. |.....+.+.++..      +...+..+|..+ ||.    +
T Consensus       267 ~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R-~VsG~RvV  345 (389)
T PF05889_consen  267 SLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKR-GVSGIRVV  345 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHT-TEESSEEE
T ss_pred             HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhC-Ccccceee
Confidence            2222222 233333334444444444444444544432 22333445555421      124455555544 654    2


Q ss_pred             eCCCCCC-----CCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          237 VPGSGFG-----PGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       237 ~~g~~~~-----~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                      .|+..+.     .-...++-++  +..++||++.++++|++++
T Consensus       346 ~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i  388 (389)
T PF05889_consen  346 TPGGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKII  388 (389)
T ss_dssp             ETSSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHH
T ss_pred             ccCCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHh
Confidence            2222111     1113677773  4669999999999999864

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=97.81  E-value=0.00032  Score=59.72  Aligned_cols=139  Identities=21%  Similarity=0.139  Sum_probs=86.5

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCC--CCCCCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDL--KGTSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY   90 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl--~~~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~   90 (272)
                      ..+..+..| +++.+-.... -...|.  .-.+++++++-+ ++|.+--..++   .++++++|+++++++++|..-+..
T Consensus       124 v~d~~~~aG~~l~EvG~tn~-t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~  199 (395)
T COG1921         124 VPDIIRLAGAKLVEVGTTNR-THLKDYELAINENTALLLKVHSSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGAL  199 (395)
T ss_pred             hhHHHHHcCCEEEEecccCc-CCHHHHHHHhccCCeeEEEEeecccccccccc---HHHHHHHHHHcCCCEEEecCCccc
Confidence            566677777 7777766533 111222  224677776655 44442222233   788999999999999999998765


Q ss_pred             ccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHh
Q 036024           91 VTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLAC  169 (272)
Q Consensus        91 ~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  169 (272)
                      +... .........  .|  +++.|-.|.+|  |.+-|.+++.+++        ++.+.+.-.............++.+.
T Consensus       200 v~~e~~l~~~la~G--aD--LV~~SgdKllg--GPqaGii~GkKel--------I~~lq~~~l~Ralrv~K~tla~l~~a  265 (395)
T COG1921         200 VDKEPDLREALALG--AD--LVSFSGDKLLG--GPQAGIIVGKKEL--------IEKLQSHPLKRALRVDKETLAALEAA  265 (395)
T ss_pred             cccccchhHHHhcC--CC--EEEEecchhcC--CCccceEechHHH--------HHHHHhhhhhhhhhcCcHhHHHHHHH
Confidence            4311 112222222  12  88889999996  4468999999999        55555544444444666666666666


Q ss_pred             cc
Q 036024          170 LS  171 (272)
Q Consensus       170 l~  171 (272)
                      ++
T Consensus       266 Le  267 (395)
T COG1921         266 LE  267 (395)
T ss_pred             HH
Confidence            65

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=97.70  E-value=0.00061  Score=58.54  Aligned_cols=248  Identities=14%  Similarity=0.014  Sum_probs=126.3

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccC-CCCC-------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPD-LKGT-------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA   86 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~-------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~   86 (272)
                      +..+.-.| ++..++.+.+.++..| +.+.       .-+-.+++.+.. .||. -.-+++.+|..+|+++++++.+|.+
T Consensus       196 eka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G-TT~~-ca~D~l~elg~Vc~~~glWLHVDAA  273 (511)
T KOG0628|consen  196 EKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLG-TTSS-CAFDELEELGPVCREEGLWLHVDAA  273 (511)
T ss_pred             HHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeec-Cccc-cccccHHHhcchhhhcCEEEEeehh
Confidence            33333445 7888888875555555 2221       223333433432 3333 3457899999999999999999999


Q ss_pred             CCccccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchH-HHHHhhh-----hhccCC-c
Q 036024           87 YAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI-NDFNRII-----CTCFNG-A  158 (272)
Q Consensus        87 ~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~-~  158 (272)
                      |++-.+.- ....+..--...|  -+-.-.||.+- --.-+.-++..+........++- -.+....     ...+.. +
T Consensus       274 YAGsa~iCpE~r~l~rGie~aD--Sfn~n~hK~~~-vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqip  350 (511)
T KOG0628|consen  274 YAGSAFICPEFRYLMRGIEYAD--SFNFNPHKWLL-VNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIP  350 (511)
T ss_pred             hccccccCHHHHHHhhcchhhc--cccCChhheeE-EeeeeecceeecCceeeeeeecChHhhcchhhccCCCccccccc
Confidence            99644331 1111111100111  11123456442 22223333333221000000000 0000000     000000 1


Q ss_pred             chHHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC--CCChHHHHHHHHHhcC
Q 036024          159 SNIAQAGGLACL--SSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKTH  233 (272)
Q Consensus       159 ~~~~~~a~~~~l--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~g  233 (272)
                      -.-...++..++  +..+.+.+++..++.-+.++.+.+.+.+- -+++..+..--.+.+++.  +...+.+..++-....
T Consensus       351 l~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~N~~ne~Ll~~in~~g~  430 (511)
T KOG0628|consen  351 LGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKGDNEINEALLNRLNSSGR  430 (511)
T ss_pred             cccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEeecCCcHHHHHHHHHHHhcCc
Confidence            111112222222  23333444444455555555565555543 577776655445667776  4556788888888888


Q ss_pred             eEeeCCCCCCCCCCCeEEEEccC---CHHHHHHHHHHHHHh
Q 036024          234 ITTVPGSGFGPGGEEYIRISGFG---HRESILEASRRLEAL  271 (272)
Q Consensus       234 i~v~~g~~~~~~~~~~~R~s~~~---~~~~i~~~l~~l~~~  271 (272)
                      |.+.|.+   ..+.-.+|++++.   +.++++++.+.|.+.
T Consensus       431 i~l~~~~---l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~  468 (511)
T KOG0628|consen  431 IHLVPAS---LHGKFVLRFAVCSPLTNESDIDEAWKIIFEA  468 (511)
T ss_pred             EEEEEee---ecceEEEEEEecCCCCcHHHHHHHHHHHHHH
Confidence            9998876   4456789999743   678899998888754

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=97.66  E-value=0.00017  Score=60.74  Aligned_cols=171  Identities=18%  Similarity=0.121  Sum_probs=51.3

Q ss_pred             HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVT   92 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~   92 (272)
                      +..+..| +++.+-.... -..-|.++  .+++.+++-.+++|..-+-+ ..-.++++++++++|++++++|-.-+.+..
T Consensus       106 ~vm~~sGa~lvEVGttN~-t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~d  184 (367)
T PF03841_consen  106 DVMRQSGARLVEVGTTNR-THLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVD  184 (367)
T ss_dssp             --------------------------------------------------------HHHHHHHHHT--EEEE-TTHHHHH
T ss_pred             cccccccccccccccccc-cccccccccccccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcC
Confidence            4445555 6666655422 11223333  37888888888777732211 112489999999999999999976632211


Q ss_pred             ----C-CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHH
Q 036024           93 ----D-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGL  167 (272)
Q Consensus        93 ----~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  167 (272)
                          + +..+++...... +--+++.|-.|.+|-|  +.|.+++..++        ++.+...-.............++.
T Consensus       185 l~~~gl~~Ep~v~~~~~~-GaDlV~fSGdKlLGGP--QaGiI~Gkk~l--------I~~lk~~pl~RalrvdK~tla~L~  253 (367)
T PF03841_consen  185 LSPYGLPDEPTVQEYLAA-GADLVTFSGDKLLGGP--QAGIIVGKKEL--------IEKLKKHPLGRALRVDKLTLAALE  253 (367)
T ss_dssp             HHTT----------CCCC-T-SEEEEETTSSSSS---S-EEEEEEHHH--------HHHHHHHHHTTT-B--HHHHHHHH
T ss_pred             cccccCccccHHHHHhhc-CCCEEEEECCCcCCCC--CeEEEEeCHHH--------HHHHhhCCCcceEeeCHHHHHHHH
Confidence                1 112333333211 2228888999999755  47999999999        555654444444446666666666


Q ss_pred             Hhccccc-----------HHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          168 ACLSSEG-----------LEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       168 ~~l~~~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      +.++...           .+.+.+..+.++++++.+.+.|...
T Consensus       254 atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~  296 (367)
T PF03841_consen  254 ATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA  296 (367)
T ss_dssp             HHHHH--------------------------------------
T ss_pred             HHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence            6555211           1335555667777777777777664

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=97.59  E-value=0.00083  Score=57.21  Aligned_cols=233  Identities=14%  Similarity=0.172  Sum_probs=128.1

Q ss_pred             eeEEeecCCCCCcccC-CCCC-----CC-ceEEEEe--cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc-cccC
Q 036024           24 NIEYLECGPGNNFFPD-LKGT-----SR-TDIIFFC--SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA-YVTD   93 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~d-l~~~-----~~-~~~i~~~--~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~-~~~~   93 (272)
                      .++.++.++.+.+.+| +++.     .+ ---.+++  .-..--|..   +++..|+++|++|++++.+|.++++ +...
T Consensus       223 ~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~~lWmHvDAAwGGglLmS  299 (510)
T KOG0629|consen  223 HCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKHKLWMHVDAAWGGGLLMS  299 (510)
T ss_pred             eeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhcCEEEEeecccccccccC
Confidence            7888999887666666 4441     11 0112232  335556665   6799999999999999999999986 3333


Q ss_pred             CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH-----------hhhhhccCCcchHH
Q 036024           94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN-----------RIICTCFNGASNIA  162 (272)
Q Consensus        94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~  162 (272)
                      ........-....+  -+.=+.+|.+| ..++++......+-+       +.+..           +....+.-+.....
T Consensus       300 ~k~R~kl~Giera~--SvtwnpHK~~g-aplqCsa~l~r~~gl-------l~~Cn~~~A~YLFq~dK~YdvS~DTgdK~i  369 (510)
T KOG0629|consen  300 RKHRHKLTGIERAN--SVTWNPHKLMG-APLQCSAFLTREEGL-------LQRCNQMSAIYLFQQDKFYDVSYDTGDKAI  369 (510)
T ss_pred             hhhHhhccCccccC--ceeecHHHhhc-CcchhhHHHHHHHHH-------HHhhcccchhhhhccCceeecccccccchh
Confidence            32222211111112  22235689998 667888766665542       11111           01111111222222


Q ss_pred             HHH-------HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeE-ec--CCCceEE-EeecC---C-CC------
Q 036024          163 QAG-------GLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKV-YG--GINAPYV-WAHFP---G-RK------  220 (272)
Q Consensus       163 ~~a-------~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~--~~~~~~~-~i~l~---~-~~------  220 (272)
                      |..       ..-+....+....++..+++-++++++.+.|++. |... ..  |+..+++ |...+   . ..      
T Consensus       370 QCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~  449 (510)
T KOG0629|consen  370 QCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDS  449 (510)
T ss_pred             hcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhh
Confidence            321       1122234455667889999999999999999998 4333 22  3323332 32221   1 01      


Q ss_pred             -----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC---CHHHHHHHHHHHHHh
Q 036024          221 -----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG---HRESILEASRRLEAL  271 (272)
Q Consensus       221 -----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~---~~~~i~~~l~~l~~~  271 (272)
                           ....-.+++++ |-... |...-...++++|.-+++   +.++++-+++.|.++
T Consensus       450 rL~kVaPkIK~~Mm~~-Gt~Mi-~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl  506 (510)
T KOG0629|consen  450 RLVKVAPKIKERMMKK-GTTMI-GYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL  506 (510)
T ss_pred             HHHhhCcHHHHHHHhc-cceee-EecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence                 11234455666 44332 222122336789988644   677888888887653

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=97.57  E-value=0.0009  Score=54.54  Aligned_cols=112  Identities=17%  Similarity=0.300  Sum_probs=77.4

Q ss_pred             HHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHc--CCEEEEcccCCc
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNN--GSIIIFDSAYAA   89 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~--~~~vi~D~~~~~   89 (272)
                      +.++..| ....+|+..++-.+.+ ++.  .+++|+|.+. +-.+..=-.++.+++++++++.++.  ++++++|.+|+.
T Consensus       133 gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGE  212 (416)
T COG4100         133 GSLKDFGIKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGE  212 (416)
T ss_pred             ccHHHhCcceeecccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchh
Confidence            4456677 7778888766544444 221  4889999997 3333333347788999999999875  799999999999


Q ss_pred             cccCCCCCCccccCCCCCceEEEecCccccCCCcc--ceeEEEeccccc
Q 036024           90 YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV--RLGWTVVPEELL  136 (272)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~--r~G~~~~~~~~~  136 (272)
                      |+-...|..+   ..  |  +..+|+-|.-| .|+  --||+.+.++++
T Consensus       213 FvE~~EPt~v---Ga--D--liAGSLIKNpG-GgiaktGGYiaGk~~~v  253 (416)
T COG4100         213 FVEEKEPTHV---GA--D--LIAGSLIKNPG-GGIAKTGGYIAGKAELV  253 (416)
T ss_pred             hhhccCcccc---ch--h--hhccceeeCCC-CceeeccceeechHHHH
Confidence            8866544332   11  1  78899999887 332  248888888884

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=97.30  E-value=0.018  Score=47.39  Aligned_cols=210  Identities=13%  Similarity=0.040  Sum_probs=117.3

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ..+.+++++..+..||+.++   +.+|-..-+..|+++=.|-+|+.   +..+..+..++.+    +-.=..-|-+....
T Consensus       213 DeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAv---gNVpL~LHdWgVD----FACWCSYKYlnaGa  282 (465)
T KOG3846|consen  213 DEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAV---GNVPLQLHDWGVD----FACWCSYKYLNAGA  282 (465)
T ss_pred             CeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhhh---cCCceEEeecCCc----eEEEeeecccccCC
Confidence            56777888899999999998   77777666777999999999874   3334455555432    22222345442111


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhh-----------------hccCCcchHHHHHHHHhcccccHHHHHHHHHHHH
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIIC-----------------TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYK  186 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  186 (272)
                      -.+|-+.+.+....+.++++...|..-..                 ...+.++.+...++..-++....-.+++.|++-.
T Consensus       283 GgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~  362 (465)
T KOG3846|consen  283 GGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSL  362 (465)
T ss_pred             CccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhh
Confidence            12455556565555555555554422211                 1222344444444444444222233455555444


Q ss_pred             HHHHHHHHHHHhC-C-----------CeEecCC----CceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeE
Q 036024          187 ENTKILIDTLASL-G-----------IKVYGGI----NAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYI  250 (272)
Q Consensus       187 ~~~~~l~~~L~~~-g-----------~~~~~~~----~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~  250 (272)
                      -...++...++.. |           +.+..|.    .|-.+.+.+.. +....+.+|-++ |+..-      ...++.+
T Consensus       363 lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss-p~~~vfqeL~kr-Gv~~D------kR~PNvI  434 (465)
T KOG3846|consen  363 LLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS-PTPKVFQELHKR-GVIGD------KRRPNVI  434 (465)
T ss_pred             hHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC-CchHHHHHHHHc-Ceecc------ccCCCce
Confidence            4444554444432 3           2222222    23344444442 334666776555 88763      2336789


Q ss_pred             EEE---ccCCHHHHHHHHHHHHHh
Q 036024          251 RIS---GFGHRESILEASRRLEAL  271 (272)
Q Consensus       251 R~s---~~~~~~~i~~~l~~l~~~  271 (272)
                      |++   ++++-.|+..++..|.++
T Consensus       435 RvAPvpLYN~f~Dvy~f~n~L~e~  458 (465)
T KOG3846|consen  435 RVAPVPLYNTFSDVYIFVNALNEA  458 (465)
T ss_pred             EeecchhhccHHHHHHHHHHHHHH
Confidence            998   578888888888887765

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=97.16  E-value=0.054  Score=49.76  Aligned_cols=189  Identities=11%  Similarity=0.001  Sum_probs=100.7

Q ss_pred             ccccCccc--chHHhcccc----eeEEeecCCCCCcccC-CCC-C-----C--CceEEEEecCCCccccCCCHHHHHHHH
Q 036024            7 VIVGQAGD--LEDEVGKYC----NIEYLECGPGNNFFPD-LKG-T-----S--RTDIIFFCSPNNPTGHAATQNQLEQLV   71 (272)
Q Consensus         7 ~~~~~~~~--~~~~~~~~g----~~~~~~~~~~~~~~~d-l~~-~-----~--~~~~i~~~~p~nptG~~~~~~~l~~l~   71 (272)
                      ++.+...+  +...+.-+|    .++.+|++.+..+.++ +++ +     .  ++-+|+-+-.+..+|.+=+   +++|+
T Consensus       225 vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp---l~eI~  301 (608)
T TIGR03811       225 WLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG---IDKIV  301 (608)
T ss_pred             EEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC---HHHHH
Confidence            44444434  445555555    4899999866555554 322 1     1  2233455577889999844   66666


Q ss_pred             HHH---HHcCC--EEEEcccCCccc---c-CCC--CCCc-------------------------cccCCCCCceEEEecC
Q 036024           72 EFA---RNNGS--IIIFDSAYAAYV---T-DGC--PRSI-------------------------YEIPGAREVAIEISSF  115 (272)
Q Consensus        72 ~~~---~~~~~--~vi~D~~~~~~~---~-~~~--~~~~-------------------------~~~~~~~~~~i~~~s~  115 (272)
                      ++|   +++++  ++.+|.+|+++.   + +..  ..+.                         ..+.+.+.---+.-.+
T Consensus       302 ~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDp  381 (608)
T TIGR03811       302 ALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDP  381 (608)
T ss_pred             HHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCc
Confidence            666   77887  699999999753   1 100  0110                         0111122111334478


Q ss_pred             ccccCCCccceeEEEecccccccCCcchHHHHHhhh-------hhccCCcchHHHHHHH--Hhcccc--cHHHHHHHHHH
Q 036024          116 SKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII-------CTCFNGASNIAQAGGL--ACLSSE--GLEAVHSVVDY  184 (272)
Q Consensus       116 sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~--~~l~~~--~~~~~~~~~~~  184 (272)
                      +|.+. ....+|.++..+....+....-...+....       .......+.++..|+.  ..++..  +.+.+.++.++
T Consensus       382 HK~g~-~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~  460 (608)
T TIGR03811       382 HKMGY-IPYSAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGA  460 (608)
T ss_pred             ccccc-cCCCeEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            99876 446788888876543211111011111000       0001112222222222  222222  55677889999


Q ss_pred             HHHHHHHHHHHHHhC
Q 036024          185 YKENTKILIDTLASL  199 (272)
Q Consensus       185 ~~~~~~~l~~~L~~~  199 (272)
                      .-+.++++.+.|..+
T Consensus       461 ~i~~A~~~~~~L~~~  475 (608)
T TIGR03811       461 SIEGAHRFYDFLNNL  475 (608)
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999999884

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=96.14  E-value=0.1  Score=42.60  Aligned_cols=234  Identities=15%  Similarity=0.140  Sum_probs=130.3

Q ss_pred             chHHhcccc--eeEEeecCCC-CCcccC---CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC
Q 036024           15 LEDEVGKYC--NIEYLECGPG-NNFFPD---LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA   88 (272)
Q Consensus        15 ~~~~~~~~g--~~~~~~~~~~-~~~~~d---l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~   88 (272)
                      ....++++|  ..+..++... .+-.||   .+..++.+.+++|....--|+-++.-.      .-.-+++.+|.|.+--
T Consensus       112 A~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~da~yvyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSn  185 (370)
T KOG2790|consen  112 AAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNPDASYVYYCANETVHGVEFDFIP------VNDPKGAVLVADMSSN  185 (370)
T ss_pred             HHHHHHhhCCceEEeccccccccCcCCChhhcccCCCccEEEEecCceeeceecCCCC------CCCCCCceEEEecccc
Confidence            445667788  3343333322 123344   222477788888866666677655222      1123578888887654


Q ss_pred             ccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcc---hHHHHHhhh--hhccCCcchHHH
Q 036024           89 AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFP---VINDFNRII--CTCFNGASNIAQ  163 (272)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~  163 (272)
                      .+. .  +..+...      -++..+..|.+|+.|+.  .++..++++-.....   .. .+....  .....+++..+.
T Consensus       186 flS-r--pvDvsk~------gvi~aGAQKN~G~aG~T--vvivr~dllg~~~~~tP~v~-dyk~~~~NnSlyNTpP~f~i  253 (370)
T KOG2790|consen  186 FLS-R--PVDVSKF------GVIFAGAQKNVGPAGVT--VVIVRKDLLGNALDITPSVL-DYKIMDKNNSLYNTPPCFGI  253 (370)
T ss_pred             hhc-C--Cccchhc------ceEEeccccccCccccE--EEEEehhhhcccccCCcccc-ceeeeccccccccCCCeeee
Confidence            322 1  1122222      16677889999988853  356666664221111   00 111000  122334555555


Q ss_pred             HHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC----CceEEEeecC-CCChHHHHHHHHHhcCeEe
Q 036024          164 AGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL-GIKVYGGI----NAPYVWAHFP-GRKSWDVFAEILEKTHITT  236 (272)
Q Consensus       164 ~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~~~~~~i~l~-~~~~~~~~~~ll~~~gi~v  236 (272)
                      ++.--.++.... ..++++.+.-.++.+.+.+.+... |+-..+-+    +-+.+.+++. ..-..++.....+++=+.+
T Consensus       254 y~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~L  333 (370)
T KOG2790|consen  254 YVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQL  333 (370)
T ss_pred             eehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecchHHHHHHHHHHHHhhhhcc
Confidence            544444442111 345778888899999999999886 76554322    2345666665 3344566677666744444


Q ss_pred             eCCCCCCCCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024          237 VPGSGFGPGGEEYIRISGFG--HRESILEASRRLEAL  271 (272)
Q Consensus       237 ~~g~~~~~~~~~~~R~s~~~--~~~~i~~~l~~l~~~  271 (272)
                      . |+    ..-+.+|-|+++  +.++++++..-++++
T Consensus       334 K-Gh----RSVGGiRASlYNAisv~~~q~L~~~m~~F  365 (370)
T KOG2790|consen  334 K-GH----RSVGGIRASLYNAISVEEVQKLAAFMKEF  365 (370)
T ss_pred             c-cc----cccccchhhhhccccHHHHHHHHHHHHHH
Confidence            2 33    225789999865  788888877776653

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=95.40  E-value=0.58  Score=42.79  Aligned_cols=238  Identities=13%  Similarity=0.067  Sum_probs=124.2

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccC-CCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccC
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAY   87 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~   87 (272)
                      ....+++.| +++++..+.++++... +..     .++..+++++.|+.- |+  -.+.+++++++.++||.-|+.|.+.
T Consensus       643 NPASA~MagmkvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST~-Gv--fE~~i~d~cd~iHehGGQVYlDGAN  719 (1001)
T KOG2040|consen  643 NPASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GV--FEEGIDDICDIIHEHGGQVYLDGAN  719 (1001)
T ss_pred             ChhhHHhcCCEEEEeeccCCCCccHHHHHHHHHHhhhhhheeEEeccccc-cc--ccccHHHHHHHHHhcCCEEEecCCC
Confidence            556778888 9999999876554332 222     256778888887632 43  3467999999999999999999876


Q ss_pred             CccccCCCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcc--hHHH--------HHhhhhh
Q 036024           88 AAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFP--VIND--------FNRIICT  153 (272)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~--~~~~--------~~~~~~~  153 (272)
                      -.-     ...+....+.... +.=--++|+|..|    |--+|=+.+...+.. .++.  +.+.        +......
T Consensus       720 MNA-----qVGlc~pGd~GaD-V~HLNLHKTFcIPHGGGGPg~gPIgVK~HLap-fLP~HpVvs~~~~~~~~~~gsVsaa  792 (1001)
T KOG2040|consen  720 MNA-----QVGLCRPGDIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAP-FLPSHPVVSPGRPEDTSPVGSVSAA  792 (1001)
T ss_pred             ccc-----eecccCCcccccc-ceeecccceeeecCCCCCCCCCccchhhhccc-cCCCCCccCCCCCCCCCCccceecc
Confidence            421     1122222111111 2222467776433    333455444433310 0000  0000        1111111


Q ss_pred             ccCCcc-hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceE---EEeecC------CCChH
Q 036024          154 CFNGAS-NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPY---VWAHFP------GRKSW  222 (272)
Q Consensus       154 ~~~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~---~~i~l~------~~~~~  222 (272)
                      .+.+.. .+...+-.+++...+   ++..-+.---+++++.+.|+.. .+-+.+. .+..   +.+++.      +.+..
T Consensus       793 P~Gsa~ILpISwaYikmMG~~G---L~~as~~AiLNaNYMakRLe~hYkil~~~~-~~~vaHEFIlD~r~fK~~agieav  868 (1001)
T KOG2040|consen  793 PWGSALILPISWAYIKMMGSGG---LKDASKIAILNANYMAKRLESHYKILFRGE-NGLVAHEFILDLRPFKKTAGIEAV  868 (1001)
T ss_pred             CCCcceeehhHHHHHHHhcccc---cchhhHHHhhhhHHHHHHHhhccceeEecC-CcceeeeeeeechhhccccCCcHH
Confidence            111011 112233333333333   3444455556778899999885 3333333 2221   334553      46677


Q ss_pred             HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHH
Q 036024          223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEA  270 (272)
Q Consensus       223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~  270 (272)
                      +...+| .++|.-.-..++.-   .+.+-+--  +.+++|+|++++++-.
T Consensus       869 DvAKRL-~DYgFHaPTmswPV---~gtLMIEPTESE~k~ElDRfcdAliS  914 (1001)
T KOG2040|consen  869 DVAKRL-MDYGFHAPTMSWPV---AGTLMIEPTESEDKAELDRFCDALIS  914 (1001)
T ss_pred             HHHHHH-HhccCCCCcccccc---CCceEeccCccccHHHHHHHHHHHHH
Confidence            877776 46687653333221   45555553  3357789998887643

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=92.49  E-value=5  Score=37.07  Aligned_cols=84  Identities=11%  Similarity=0.071  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceE--EEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE
Q 036024          176 EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPY--VWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS  253 (272)
Q Consensus       176 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~--~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s  253 (272)
                      ..++++.+++....-.|...|+..|-++...  .+|  +-+.+.+ ..++...+.+++ +|-++-   +   ..+.+-++
T Consensus       391 ~gL~~IArrvh~~T~~l~~~l~~aghel~~k--~fFDTLkI~~~~-s~~~~l~rA~~~-~iNlr~---~---ed~tigvs  460 (1001)
T KOG2040|consen  391 HGLKEIARRVHNLTLILAEGLKNAGHELQHK--PFFDTLKIRCGC-SAEEVLDRAAKR-QINLRL---V---EDGTIGVS  460 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcchhhccc--cccceEEEEecC-cHHHHHHHHHhh-cCceEE---e---ecCceEEe
Confidence            6678899999999999999999888666553  244  3344444 566777776666 565532   1   25677788


Q ss_pred             c--cCCHHHHHHHHHHHH
Q 036024          254 G--FGHRESILEASRRLE  269 (272)
Q Consensus       254 ~--~~~~~~i~~~l~~l~  269 (272)
                      +  ..+++|++.++..+.
T Consensus       461 lDETv~~~DvddLl~vf~  478 (1001)
T KOG2040|consen  461 LDETVTEKDVDDLLWVFN  478 (1001)
T ss_pred             ecccccHHHHHHHHHHHc
Confidence            7  346888998888764

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=90.13  E-value=0.22  Score=40.26  Aligned_cols=59  Identities=15%  Similarity=0.204  Sum_probs=37.5

Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           63 TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.+++|..+|..|++.-++..+|+.-. ...-..+..-......-.++.|+-|.|-.|
T Consensus       172 ~pd~leaiaaica~~diphivnnayglqs-ee~i~~iaa~~~~grida~vqsldknf~vp  230 (432)
T KOG3843|consen  172 SPDNLEAIAAICAAHDIPHIVNNAYGLQS-EECIHKIAAAAECGRIDAFVQSLDKNFMVP  230 (432)
T ss_pred             CCchHHHHHHHHHccCchhhhccccccch-HHHHHHHHHHhhhccHHHHHHHhhhcceee
Confidence            45789999999999999999999997421 110011111111111225678999999754

>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex)

Probab=88.85  E-value=1.2  Score=37.94  Aligned_cols=69  Identities=16%  Similarity=0.133  Sum_probs=50.3

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEE-EecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIF-FCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF   83 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~-~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~   83 (272)
                      +.+..+.++ ++....+.++.+|.+.++..|+..-.- ......+.|..++.+++++|++-|+++++-||-
T Consensus        23 ~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP   93 (329)
T cd06568          23 YIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGSTEVGGGPGGYYTQEDYKDIVAYAAERHITVVP   93 (329)
T ss_pred             HHHHHHHhCCcEEEEEeecCCcceeeecCcccccccccccccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence            345667788 899999998889998877644322110 112234567789999999999999999999883

SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.

>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides

Probab=88.03  E-value=0.95  Score=38.08  Aligned_cols=68  Identities=19%  Similarity=0.125  Sum_probs=48.9

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEE-ecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFF-CSPNNPTGHAATQNQLEQLVEFARNNGSIIIF   83 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~-~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~   83 (272)
                      +.+..+.++ ++..+.+.++.+|.++++..|...-.-- .++ .+.|..++++++++|++.|+++|+-||-
T Consensus        21 ~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~~~~-~~~~~~yT~~di~elv~yA~~rgI~viP   90 (303)
T cd02742          21 TIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQINP-RSPGGFYTYAQLKDIIEYAAARGIEVIP   90 (303)
T ss_pred             HHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcccccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence            345667788 9999999999899888666443211100 122 2445579999999999999999999883

These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.

>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin

Probab=87.11  E-value=1.3  Score=38.19  Aligned_cols=69  Identities=17%  Similarity=0.192  Sum_probs=49.6

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEE------------EecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIF------------FCSPNNPTGHAATQNQLEQLVEFARNNGSII   81 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~------------~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v   81 (272)
                      ..+..+.++ ++..+.+.++.+|.++++..|....+-            ......|.|..++.+++++|++.|+++|+-|
T Consensus        23 ~Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~V  102 (357)
T cd06563          23 FIDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITV  102 (357)
T ss_pred             HHHHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEE
Confidence            345567788 889999998889998877644321110            0111335567899999999999999999998


Q ss_pred             EE
Q 036024           82 IF   83 (272)
Q Consensus        82 i~   83 (272)
                      |-
T Consensus       103 IP  104 (357)
T cd06563         103 IP  104 (357)
T ss_pred             EE
Confidence            83

Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.

>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides

Probab=85.85  E-value=1.7  Score=37.34  Aligned_cols=65  Identities=15%  Similarity=0.116  Sum_probs=49.0

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF   83 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~   83 (272)
                      +.+..+.++ ++..+++.++.+|.++++..|...-.    -...++..++.+++++|++.|+++++.||-
T Consensus        23 ~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~----ga~~~~~~YT~~di~eiv~yA~~rgI~vIP   88 (348)
T cd06562          23 TIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKK----GAYSPSEVYTPEDVKEIVEYARLRGIRVIP   88 (348)
T ss_pred             HHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhc----cCcCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence            345566788 88999999998999987765542210    112346678999999999999999999983

The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in

>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin

Probab=85.40  E-value=2.4  Score=35.80  Aligned_cols=62  Identities=19%  Similarity=0.227  Sum_probs=47.4

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII   82 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi   82 (272)
                      +.+..+.++ ++....+.++.+|.++++..|...-     .. ..|..++.+++++|++.|+++|+.||
T Consensus        23 ~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~-----~g-~~~~~yT~~di~elv~yA~~rgI~vI   85 (311)
T cd06570          23 QLDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQ-----KA-SDGLYYTQEQIREVVAYARDRGIRVV   85 (311)
T ss_pred             HHHHHHHhCCeEEEEEEecCCCceeecCCCccccc-----cC-CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence            345567788 8899999888899998776554221     11 13556899999999999999999888

Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.

>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3

Probab=83.01  E-value=0.68  Score=39.72  Aligned_cols=68  Identities=22%  Similarity=0.273  Sum_probs=46.7

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF   83 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~   83 (272)
                      +.+..+.++ ++..+++.++.+|.+++...+...-.--..++.+ |..++++++++|++.|+++|+-||-
T Consensus        23 ~id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga~~~~~~-~~~yT~~di~~lv~yA~~~gI~VIP   91 (351)
T PF00728_consen   23 LIDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGAYRPSDA-GGYYTKEDIRELVAYAKERGIEVIP   91 (351)
T ss_dssp             HHHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTTESTTCT-ESEBEHHHHHHHHHHHHHTT-EEEE
T ss_pred             HHHHHHHcCCcEEEEEEecCCCCccccCCCccccccCccccccc-cccCCHHHHHHHHHHHHHcCCceee
Confidence            445667788 9999999988899988766543221111111113 4489999999999999999999883

2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....

>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin

Probab=82.24  E-value=3.8  Score=36.53  Aligned_cols=68  Identities=16%  Similarity=0.227  Sum_probs=48.8

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceE--EE-----------E----ecC--CCccccCCCHHHHHHHHHHH
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDI--IF-----------F----CSP--NNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~--i~-----------~----~~p--~nptG~~~~~~~l~~l~~~~   74 (272)
                      +.+..+.++ ++..+++.++.+|.++++..|...-  -+           .    ..+  ..+.+..++.+++++|++.|
T Consensus        27 ~Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA  106 (445)
T cd06569          27 LLDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYA  106 (445)
T ss_pred             HHHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHH
Confidence            445567788 9999999999999998776543211  00           0    011  12345678999999999999


Q ss_pred             HHcCCEEE
Q 036024           75 RNNGSIII   82 (272)
Q Consensus        75 ~~~~~~vi   82 (272)
                      +++++.||
T Consensus       107 ~~rgI~VI  114 (445)
T cd06569         107 KARHIEVI  114 (445)
T ss_pred             HHcCCEEE
Confidence            99999988

Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	272
4fl0_A	456	Crystal Structure Of Ald1 From Arabidopsis Thaliana		1e-122
2z1z_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		1e-110
3eia_A	432	Crystal Structure Of K270q Variant Of Ll-Diaminopim		1e-110
3ei8_A	432	Crystal Structure Of K270n Variant Of Ll-Diaminopim		1e-110
2z20_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		1e-109
3qgu_A	449	L,L-Diaminopimelate Aminotransferase From Chalmydom		2e-96
3asa_A	400	Crystal Structure Of Apo-Ll-Diaminopimelate Aminotr		6e-54
2x5d_A	412	Crystal Structure Of A Probable Aminotransferase Fr		3e-20
1dju_A	388	Crystal Structure Of Aromatic Aminotransferase From		1e-17
1gde_A	389	Crystal Structure Of Pyrococcus Protein A-1 E-form		2e-17
2z61_A	370	Crystal Structure Of Mj0684 From Methanococcus Jann		6e-16
2o1b_A	404	Structure Of Aminotransferase From Staphylococcus A		1e-14
1o4s_A	389	Crystal Structure Of Aspartate Aminotransferase (Tm		8e-14
1v2d_A	381	Crystal Structure Of T.Th Hb8 Glutamine Aminotransf		3e-13
1j32_A	388	Aspartate Aminotransferase From Phormidium Lapideum		4e-13
3h14_A	391	Crystal Structure Of A Putative Aminotransferase Fr		4e-10
2dou_A	376	Probable N-Succinyldiaminopimelate Aminotransferase		9e-10
1b5o_A	385	Thermus Thermophilus Aspartate Aminotransferase Sin		1e-09
1bkg_A	385	Aspartate Aminotransferase From Thermus Thermophilu		2e-09
3jtx_A	396	Crystal Structure Of Aminotransferase (np_283882.1)		2e-09
1gc3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		2e-09
5bj3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		2e-09
1gck_A	385	Thermus Thermophilus Aspartate Aminotransferase Dou		2e-09
1bjw_A	382	Aspartate Aminotransferase From Thermus Thermophilu		7e-09
1w7n_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		2e-08
1w7l_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		1e-07
3fvs_A	422	Human Kynurenine Aminotransferase I In Complex With		1e-07
3e2z_B	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		3e-07
1xi9_A	406	Alanine Aminotransferase From Pyrococcus Furiosus P		4e-07
3op7_A	375	Crystal Structure Of A Plp-Dependent Aminotransfera		6e-07
1gew_A	356	Crystal Structure Of Histidinol-Phosphate Aminotran		6e-07
1u08_A	386	Crystal Structure And Reactivity Of Ybdl From Esche		8e-07
1fg3_A	356	Crystal Structure Of L-Histidinol Phosphate Aminotr		1e-06
3e2f_A	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		1e-06
3ele_A	398	Crystal Structure Of Amino Transferase (rer07020700		1e-05
3p1t_A	337	Crystal Structure Of A Putative Aminotransferase (B		2e-05
3cq5_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		2e-05
3cq4_A	376	Histidinol-Phosphate Aminotransferase From Coryneba		3e-05
3ezs_A	376	Crystal Structure Of Aminotransferase Aspb (Np_2074		4e-05
1yiy_A	429	Aedes Aegypti Kynurenine Aminotransferase Length =		4e-05
3ffh_A	363	The Crystal Structure Of Histidinol-phosphate Amino		7e-05
3ly1_A	354	Crystal Structure Of Putative Histidinol-Phosphate		7e-05
2gb3_A	409	Crystal Structure Of Aspartate Aminotransferase (Tm		1e-04
3cq6_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		1e-04
1yiz_A	429	Aedes Aegypti Kynurenine Aminotrasferase Length = 4		2e-04
4dgt_A	391	Crystal Structure Of Plp-Bound Putative Aminotransf		2e-04
1lkc_A	364	Crystal Structure Of L-Threonine-O-3-Phosphate Deca		2e-04
2f8j_A	347	Crystal Structure Of Histidinol-phosphate Aminotran		3e-04
1uu1_A	335	Complex Of Histidinol-Phosphate Aminotransferase (H		3e-04
1h1c_A	335	Histidinol-Phosphate Aminotransferase (Hisc) From T		3e-04
3fkd_A	350	The Crystal Structure Of L-Threonine-O-3-Phosphate		4e-04
2egy_A	397	Crystal Structure Of Lysn, Alpha-Aminoadipate Amino		5e-04
2o0r_A	411	The Three-Dimensional Structure Of N-Succinyldiamin		6e-04

>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana Length = 456

Iteration: 1
 Score =  436 bits (1120), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 198/272 (72%), Positives = 235/272 (86%)
Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AYIDSSVI+GQ G   ++  KY N+ Y+ CGP N+FFPDL  T RTD+IFFCSPNNPTG+
Sbjct: 168 AYIDSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDLAMTPRTDVIFFCSPNNPTGY 227
Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
            A++ QL QLV+FA+ NGSIIIFDSAYAA++ DG PRSIYEIPGAREVAIE+SSFSKF+G
Sbjct: 228 VASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAG 287
Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGW+++P+ELL+S+GFP+INDF+RI+ T FNGASNIAQAGGLACLSS GL+ + S
Sbjct: 288 FTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQAGGLACLSSGGLKEIRS 347
Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           V +YYKEN KIL+DTL SLG+KVYGG+NAPY+W HF G KSWDVF EILE THI TVPGS
Sbjct: 348 VNNYYKENRKILMDTLVSLGLKVYGGVNAPYLWVHFKGSKSWDVFNEILENTHIITVPGS 407
Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGEEY+RISGFG R+ I+EAS+RL+  F
Sbjct: 408 GFGPGGEEYLRISGFGRRDHIVEASKRLQNFF 439

>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-malate Ion Length = 432

Iteration: 1
 Score =  395 bits (1015), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/272 (70%), Positives = 225/272 (82%)
Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AY+DSSVI+GQ G    +V KY NIEY+ C P N FFPDL    RTDIIFFCSPNNPTG 
Sbjct: 154 AYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGA 213
Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AAT+ QL QLVEFA+ NGSII++DSAYA Y++D  PRSI+EIPGA EVA+E +SFSK++G
Sbjct: 214 AATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAG 273
Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTV+P++LL+S GFPV  DFNRIICTCFNGASNI+QAG LACL+ EGLEA+H 
Sbjct: 274 FTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHK 333
Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           V+ +YKENT I+IDT  SLG  VYGG NAPYVW HFP + SWDVFAEILEKTH+ T PGS
Sbjct: 334 VIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGS 393
Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGE ++R+S FGHRE+ILEA RR + L+
Sbjct: 394 GFGPGGEGFVRVSAFGHRENILEACRRFKQLY 425

>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-Glu: External Aldimine Form Length = 432

Iteration: 1
 Score =  394 bits (1012), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/272 (70%), Positives = 225/272 (82%)
Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AY+DSSVI+GQ G    +V KY NIEY+ C P N FFPDL    RTDIIFFCSPNNPTG 
Sbjct: 154 AYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGA 213
Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AAT+ QL QLVEFA+ NGSII++DSAYA Y++D  PRSI+EIPGA EVA+E +SFS+++G
Sbjct: 214 AATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSQYAG 273
Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTV+P++LL+S GFPV  DFNRIICTCFNGASNI+QAG LACL+ EGLEA+H 
Sbjct: 274 FTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHK 333
Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           V+ +YKENT I+IDT  SLG  VYGG NAPYVW HFP + SWDVFAEILEKTH+ T PGS
Sbjct: 334 VIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGS 393
Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGE ++R+S FGHRE+ILEA RR + L+
Sbjct: 394 GFGPGGEGFVRVSAFGHRENILEACRRFKQLY 425

>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With Ll-Dap: External Aldimine Form Length = 432

Iteration: 1
 Score =  393 bits (1010), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/272 (70%), Positives = 224/272 (82%)
Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AY+DSSVI+GQ G    +V KY NIEY+ C P N FFPDL    RTDIIFFCSPNNPTG 
Sbjct: 154 AYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGA 213
Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AAT+ QL QLVEFA+ NGSII++DSAYA Y++D  PRSI+EIPGA EVA+E +SFS ++G
Sbjct: 214 AATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAG 273
Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTV+P++LL+S GFPV  DFNRIICTCFNGASNI+QAG LACL+ EGLEA+H 
Sbjct: 274 FTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHK 333
Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           V+ +YKENT I+IDT  SLG  VYGG NAPYVW HFP + SWDVFAEILEKTH+ T PGS
Sbjct: 334 VIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGS 393
Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGE ++R+S FGHRE+ILEA RR + L+
Sbjct: 394 GFGPGGEGFVRVSAFGHRENILEACRRFKQLY 425

>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Length = 432

Iteration: 1
 Score =  389 bits (999), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/272 (70%), Positives = 220/272 (80%)
Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AY+DSSVI GQ G    +V KY NIEY  C P N FFPDL    RTDIIFFCSPNNPTG 
Sbjct: 154 AYVDSSVIXGQTGQFNTDVQKYGNIEYXRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGA 213
Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AAT+ QL QLVEFA+ NGSII++DSAYA Y +D  PRSI+EIPGA EVA E +SFSK++G
Sbjct: 214 AATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVAXETASFSKYAG 273
Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTV+P++LL+S GFPV  DFNRIICTCFNGASNI+QAG LACL+ EGLEA H 
Sbjct: 274 FTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAXHK 333
Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           V+ +YKENT I+IDT  SLG  VYGG NAPYVW HFP + SWDVFAEILEKTH+ T PGS
Sbjct: 334 VIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGS 393
Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGE ++R+S FGHRE+ILEA RR + L+
Sbjct: 394 GFGPGGEGFVRVSAFGHRENILEACRRFKQLY 425

>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas Reinhardtii Length = 449

Iteration: 1
 Score =  348 bits (893), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 162/272 (59%), Positives = 210/272 (77%), Gaps = 3/272 (1%)
Query: 2   YIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHA 61
           Y+D+SV++G  GD  +  G +  IEY+ C P N+FFPDL    RTDIIFFCSPNNPTG A
Sbjct: 168 YVDTSVMMGMTGD-HNGTG-FDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAA 225
Query: 62  ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSG 120
           AT+ QL +LV FAR NGSI+++D+AYA Y+++  CP++IYEIPGA EVAIE  SFSK++G
Sbjct: 226 ATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAG 285
Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTVVP+ L +++G PV  D+NR++ TCFNGASNI QAGGLACL  EGL+ +++
Sbjct: 286 FTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNA 345
Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           ++ +YKEN +IL  T   +G  VYGG +APY+W  FPG+ SWDVFAEILE+ +I T PGS
Sbjct: 346 MIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWVGFPGKPSWDVFAEILERCNIVTTPGS 405
Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           G+GP GE ++R S FG RE+ILEA RR +  +
Sbjct: 406 GYGPAGEGFVRASAFGSRENILEAVRRFKEAY 437

>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate Aminotransferase From Chlamydia Trachomatis Length = 400

Iteration: 1
 Score =  207 bits (526), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 112/249 (44%), Positives = 153/249 (61%), Gaps = 14/249 (5%)
Query: 28  LECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAY 87
           L C   N FFP+    +  DI+  CSPNNPTG    ++QL  +V +A  +  +I+FD+AY
Sbjct: 146 LPCLQENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAY 205
Query: 88  AAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND 146
           + +++D   P+SI+EIP AR  AIEI+SFSK  GF G+RLGWTV+P+EL ++ G  VI D
Sbjct: 206 STFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQD 265
Query: 147 FNRIICTCFNGASNIAQAGGLACLS-SEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG 205
           + R + T FNGAS  AQ  G+A LS    LEA+H    YY+EN+ +L   L + G +V+G
Sbjct: 266 WERFLSTTFNGASIPAQEAGVAGLSILPQLEAIH----YYRENSDLLRKALLATGFEVFG 321
Query: 206 GINAPYVW-----AHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRES 260
           G +APY+W     A+   R  +D F   L + HI   PG GFG  G  ++R S  G RE 
Sbjct: 322 GEHAPYLWVKPTQANISDRDLFDFF---LREYHIAITPGIGFGRSGSGFVRFSSLGKRED 378
Query: 261 ILEASRRLE 269
           IL A  RL+
Sbjct: 379 ILAACERLQ 387

>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From Pseudomonas Aeruginosa Length = 412

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 19/260 (7%)
Query: 23  CNIEYLECGPGNNFFPDLKGTSRTDI-----IFFCSPNNPTGHAATQNQLEQLVEFARNN 77
             +  +   PG +FF +L+   R  I     +    P+NPT      +  E++V  A+  
Sbjct: 145 AQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQY 204
Query: 78  GSIIIFDSAYAAYVTDGCPR-SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
             +++ D AYA  V DG    SI ++PGA+++A+E  + SK     G R+G+ V   EL 
Sbjct: 205 DVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPEL- 263
Query: 137 FSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL 196
                  ++   RI      G     Q   +A L  +  + V  +   Y++   +L+  L
Sbjct: 264 -------VSALARIKSYHDYGTFTPLQVAAIAALEGDQ-QCVRDIARQYQQRRDVLVKGL 315
Query: 197 ASLGIKVYGGINAPYVWAHFP----GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRI 252
              G  V     + YVWA  P       S +   ++L+   ++  PG GFG  G++++R 
Sbjct: 316 REAGWMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRF 375
Query: 253 SGFGHRESILEASRRLEALF 272
           +   +R+ + +A R ++A+F
Sbjct: 376 ALIENRDRLRQAVRGIKAMF 395

>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From Pyrococcus Horikoshii Ot3 Length = 388

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 10/233 (4%)
Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SIYE 101
           T +T  +   SP NPTG   T+  LE++ +F   +  I+I D  Y  ++ D     SI  
Sbjct: 157 TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIAS 216
Query: 102 IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161
           + G  E  I ++ FSK    TG RLG+   P  ++       +  F     TC    + I
Sbjct: 217 LDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIER-----MVKFQMYNATC--PVTFI 269
Query: 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHF--PGR 219
             A   A       +AV  +   Y    K++   L  +G+       A Y++      G 
Sbjct: 270 QYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGL 329
Query: 220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272
            S      +L++  +  VPGS FG  GE Y+RIS     E + EA  R+E + 
Sbjct: 330 TSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMERMERVL 382

>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form Length = 389

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 10/233 (4%)
Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SIYE 101
           T +T  +   SP NPTG   T+  LE++ +F   +  I+I D  Y  ++ D     SI  
Sbjct: 158 TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIAS 217
Query: 102 IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161
           + G  E  I ++ FSK    TG RLG+   P  ++       +  F     TC    + I
Sbjct: 218 LDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIER-----MVKFQMYNATC--PVTFI 270
Query: 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHF--PGR 219
             A   A       +AV  +   Y    K++   L  +G+       A Y++      G 
Sbjct: 271 QYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGL 330
Query: 220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272
            S      +L++  +  VPGS FG  GE Y+RIS     E + EA  R+E + 
Sbjct: 331 TSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVL 383

>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii Reveals Its Similarity In The Active Site To Kynurenine Aminotransferases Length = 370

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 13/230 (5%)
Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
           + +T  I   SP+NP G    +    ++ EFA  N   II D  Y   V +G   S  E 
Sbjct: 152 SDKTKAIIINSPSNPLGEVIDR----EIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEF 207
Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162
               E  I I+ FS     TG R+G+ +  +E        +I    ++    F  A  I+
Sbjct: 208 DENLEKTILINGFSXLYAMTGWRIGYVISNDE--------IIEAILKLQQNLFISAPTIS 259
Query: 163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSW 222
           Q   L     E    ++S++  +    ++++  +   G +V   I A YV+ +  G    
Sbjct: 260 QYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNI-GEDGR 318
Query: 223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           +   ++L++  +   PG GFG  G+ YIRIS     E+I E   R++   
Sbjct: 319 EFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIKEFL 368

>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus Length = 404

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 93/236 (39%), Gaps = 24/236 (10%)
Query: 44  SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIP 103
            +T +I+   PNNPTG  AT+   ++ +   +   + I+ D AY A+  D    SI    
Sbjct: 180 DKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASE 239
Query: 104 GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ 163
             ++VAIEI S SK    +G R+G+ V                 N+              
Sbjct: 240 NGKDVAIEIYSLSKGYNXSGFRVGFAVG----------------NKDXIQALKKYQTHTN 283
Query: 164 AGGLACLSSEGLEAVHSVVDYYKENTKILID-------TLASLGIKVYGGINAPYVWAHF 216
           AG    L    + A++   D+ +E + +           LA   +         YVW   
Sbjct: 284 AGXFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAXLAKADLPFVHAKGGIYVWLET 343
Query: 217 PGRKSWDVFAEIL-EKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271
           P     + F + L ++  I   PG  FG  G  Y+RIS     + + EA+ RL  L
Sbjct: 344 PPGYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTEL 399

>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255) From Thermotoga Maritima At 1.90 A Resolution Length = 389

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 22/252 (8%)
Query: 24  NIEYLECGPGNNFFPDLKGTS-----RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78
            +  +E     NF P L+        +T  +   SPNNPTG    +  LE LV  A+   
Sbjct: 148 TVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRN 207
Query: 79  SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFS 138
             II D  Y + V      SI ++    +  + I+ FSK    TG R+G+ +  E++  +
Sbjct: 208 FYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATA 267
Query: 139 SGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS 198
                ++       +C N    +AQ   L  L  +    V +    +KE    +++ L  
Sbjct: 268 -----VSKIQSHTTSCIN---TVAQYAALKALEVDNSYMVQT----FKERKNFVVERLKK 315
Query: 199 LGIKVYGGINAPYVWAHFPGRKSWDVFAE-ILEKTHITTVPGSGFGPGGEEYIRISGFGH 257
           +G+K      A Y++  F  R     F E +LE+  +  VPGS F   G  ++R+S    
Sbjct: 316 MGVKFVEPEGAFYLF--FKVRGDDVKFCERLLEEKKVALVPGSAFLKPG--FVRLSFATS 371
Query: 258 RESILEASRRLE 269
            E + EA  R+E
Sbjct: 372 IERLTEALDRIE 383

>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase Length = 381

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
           T RT  +   +P NPTG    + +LE +   AR +   +I D  Y        PR + E 
Sbjct: 150 TPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF 209
Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162
             A E    + S  K    TG R+GW V P+E +     P +    +   T F+  + + 
Sbjct: 210 --APERTFTVGSAGKRLEATGYRVGWIVGPKEFM-----PRLAGMRQ--WTSFSAPTPL- 259
Query: 163 QAGGLACLSSEGLEAVHSVV-DYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKS 221
           QAG    L     E  +  + + Y+    +L   L ++G++VY      ++ A  PG   
Sbjct: 260 QAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPG--- 316
Query: 222 WDVFAEILEKTHITTVPGSGF 242
           WD F  ++E+  +  +P S F
Sbjct: 317 WDAF-RLVEEARVALIPASAF 336

>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum Length = 388

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 16/235 (6%)
Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SI-Y 100
           T +T ++ F +P+NPTG   T +++  + + A   G  ++ D  Y   + D     SI  
Sbjct: 161 TPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGA 220
Query: 101 EIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160
             P A E ++  S F+K    TG R+G+   P         P++    +I     +    
Sbjct: 221 ASPEAYERSVVCSGFAKTYAMTGWRVGFLAGP--------VPLVKAATKIQGHSTSNVCT 272
Query: 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP-- 217
            AQ G +A   +   + V  ++  + E  + ++D L ++ G++      A Y++      
Sbjct: 273 FAQYGAIAAYENSQ-DCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKT 331
Query: 218 GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GR S D  +E+L++  + TVPG+ F  G ++ IR+S     ++I     RLE   
Sbjct: 332 GRSSLDFCSELLDQHQVATVPGAAF--GADDCIRLSYATDLDTIKRGMERLEKFL 384

>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From Silicibacter Pomeroyi Length = 391

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 100/250 (40%), Gaps = 19/250 (7%)
Query: 28  LECGPGNNFFPDLKGTSRTDI--IFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDS 85
           L   P N   P     +  D+  +   SP NPTG          L+E A+  G+  I D 
Sbjct: 142 LPTAPENRLQPVPADFAGLDLAGLXVASPANPTGTXLDHAAXGALIEAAQAQGASFISDE 201
Query: 86  AYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN 145
            Y     +    +  E+     V   I+SFSK+   TG R+GW VVPE+         + 
Sbjct: 202 IYHGIEYEAKAVTALELTDECYV---INSFSKYFSXTGWRVGWXVVPEDQ--------VR 250
Query: 146 DFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI-KVY 204
              RI    F  A + +Q    A  + +    + + +D YK N K+ ++ L   G  ++ 
Sbjct: 251 VVERIAQNXFICAPHASQV--AALAALDCDAELQANLDVYKANRKLXLERLPKAGFTRIA 308
Query: 205 GGINAPYVWAHFPG--RKSWDVFAEILEKTHITTVPGSGFGP-GGEEYIRISGFGHRESI 261
               A YV+A        S    AEILEK  +   PG  F P  G   +R S       I
Sbjct: 309 PPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADI 368
Query: 262 LEASRRLEAL 271
            E   RLEA 
Sbjct: 369 EEGLDRLEAF 378

>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase (Ttha0342) From Thermus Thermophilus Hb8 Length = 376

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 19/231 (8%)
Query: 46  TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA 105
             ++    PNNPTG  A     E+ +  AR +G  +I D+ Y   V +G   S   +PGA
Sbjct: 159 AKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGA 218
Query: 106 REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAG 165
           +E  +E+ S SK     G RLG+ +  EE         +    R+      G  +  Q  
Sbjct: 219 KERVVELFSLSKSYNLAGFRLGFALGSEE--------ALARLERV-----KGVIDFNQYA 265
Query: 166 GLACLSSEGLEAVHSVV----DYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKS 221
           G+  +  E L+    VV      Y+E    + + L  + + +       Y+W   P    
Sbjct: 266 GVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV-LSLLPPRATMYLWGRLPEGVD 324
Query: 222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRL-EAL 271
              F   L +  +   PG GFGPGG+ ++RI+     E +LEA++R+ EAL
Sbjct: 325 DLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL 375

>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single Mutant 1 Length = 385

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 28/252 (11%)
Query: 28  LECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82
           +E  P   F PD +      T RT  +   SPNNPTG    +  LE L   A  +   ++
Sbjct: 142 VETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 83  FDSAYAAYVTDGCPRSIYEIPG--AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG 140
            D  Y   + +G   S    PG  A E  + ++  +K    TG R+G+   P+E      
Sbjct: 202 SDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE------ 251
Query: 141 FPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDY----YKENTKILIDTL 196
             VI     +          IAQ   L  L+++  EA  + V+     Y+    +L++ L
Sbjct: 252 --VIKAMASVSSQSTTSPDTIAQWATLEALTNQ--EASRAFVEMAREAYRRRRDLLLEGL 307
Query: 197 ASLGIKVYGGINAPYVWAHFPGRKSWDV-FAEILEKTHITTVPGSGFGPGGEEYIRISGF 255
            +LG+K      A YV          +V  AE L +  +  VPG+ F   G  ++R+S  
Sbjct: 308 TALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLSYA 365
Query: 256 GHRESILEASRR 267
              E++ +A  R
Sbjct: 366 TSEENLRKALER 377

>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With Maleate Length = 385

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 28/252 (11%)
Query: 28  LECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82
           +E  P   F PD +      T RT  +   SPNNPTG    +  LE L   A  +   ++
Sbjct: 142 VETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 83  FDSAYAAYVTDGCPRSIYEIPG--AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG 140
            D  Y   + +G   S    PG  A E  + ++  +K    TG R+G+   P+E      
Sbjct: 202 SDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE------ 251
Query: 141 FPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDY----YKENTKILIDTL 196
             VI     +          IAQ   L  L+++  EA  + V+     Y+    +L++ L
Sbjct: 252 --VIKAMASVSSQSTTSPDTIAQWATLEALTNQ--EASRAFVEMAREAYRRRRDLLLEGL 307
Query: 197 ASLGIKVYGGINAPYVWAHFPGRKSWDV-FAEILEKTHITTVPGSGFGPGGEEYIRISGF 255
            +LG+K      A YV          +V  AE L +  +  VPG+ F   G  ++R+S  
Sbjct: 308 TALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLSYA 365
Query: 256 GHRESILEASRR 267
              E++ +A  R
Sbjct: 366 TSEENLRKALER 377

>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From Neisseria Meningitidis Z2491 At 1.91 A Resolution Length = 396

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 38/269 (14%)
Query: 25  IEYLECGPGNNFFPDLKGTS-----RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS 79
           I +  C P  +F PD +  S     RT ++F CSPNNP+G     +  +++ +     G 
Sbjct: 144 IHFANC-PAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGF 202
Query: 80  IIIFDSAYAAYVTD-----GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE 134
           II  D  Y+    D     GC ++  ++  +R+  +  +S S  S   G+R G+     E
Sbjct: 203 IIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLXFTSLSXRSNVPGLRSGFVAGDAE 262
Query: 135 LLFSSGFPVINDFNRIICTCFNGA--SNIAQAGGLACLSSEGLEAVHSVVD---YYKENT 189
           LL           N ++   ++G+  S   Q   +A    E       V+D    Y+E  
Sbjct: 263 LL----------KNFLLYRTYHGSAXSIPVQRASIAAWDDE-----QHVIDNRRLYQEKF 307
Query: 190 KILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGF------G 243
           + +I  L  +   V     + Y+W   P          + +K  I  +PG         G
Sbjct: 308 ERVIPILQQV-FDVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVLPGRFLARDTEQG 366
Query: 244 PGGEEYIRISGFGHRESILEASRRLEALF 272
             GE Y+RI+      + ++A+  + +L+
Sbjct: 367 NPGEGYVRIALVADVATCVKAAEDIVSLY 395

>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 2 Complexed With Tryptophan Length = 385

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 28/252 (11%)
Query: 28  LECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82
           +E  P   F PD +      T RT  +   SPNNPTG    +  LE L   A  +   ++
Sbjct: 142 VETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 83  FDSAYAAYVTDGCPRSIYEIPG--AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG 140
            D  Y   + +G   S    PG  A E  + ++  +K    TG R+G+   P+E      
Sbjct: 202 SDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE------ 251
Query: 141 FPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDY----YKENTKILIDTL 196
             VI     +          IAQ   L  L+++  EA  + V+     Y+    +L++ L
Sbjct: 252 --VIKAMASVSRQSTTSPDTIAQWATLEALTNQ--EASRAFVEMAREAYRRRRDLLLEGL 307
Query: 197 ASLGIKVYGGINAPYVWAHFPGRKSWDV-FAEILEKTHITTVPGSGFGPGGEEYIRISGF 255
            +LG+K      A YV          +V  AE L +  +  VPG+ F   G  ++R+S  
Sbjct: 308 TALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLSYA 365
Query: 256 GHRESILEASRR 267
              E++ +A  R
Sbjct: 366 TSEENLRKALER 377

>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 1 Length = 385

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 28/252 (11%)
Query: 28  LECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82
           +E  P   F PD +      T RT  +   SPNNPTG    +  LE L   A  +   ++
Sbjct: 142 VETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 83  FDSAYAAYVTDGCPRSIYEIPG--AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG 140
            D  Y   + +G   S    PG  A E  + ++  +K    TG R+G+   P+E      
Sbjct: 202 SDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE------ 251
Query: 141 FPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDY----YKENTKILIDTL 196
             VI     +          IAQ   L  L+++  EA  + V+     Y+    +L++ L
Sbjct: 252 --VIKAMASVSRQSTTSPDTIAQWATLEALTNQ--EASRAFVEMAREAYRRRRDLLLEGL 307
Query: 197 ASLGIKVYGGINAPYVWAHFPGRKSWDV-FAEILEKTHITTVPGSGFGPGGEEYIRISGF 255
            +LG+K      A YV          +V  AE L +  +  VPG+ F   G  ++R+S  
Sbjct: 308 TALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLSYA 365
Query: 256 GHRESILEASRR 267
              E++ +A  R
Sbjct: 366 TSEENLRKALER 377

>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double Mutant 1 Complexed With Aspartate Length = 385

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 28/252 (11%)
Query: 28  LECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82
           +E  P   F PD +      T RT  +   SPNNPTG    +  LE L   A  +   ++
Sbjct: 142 VETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 83  FDSAYAAYVTDGCPRSIYEIPG--AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG 140
            D  Y   + +G   S    PG  A E  + ++  +K    TG R+G+   P+E      
Sbjct: 202 SDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE------ 251
Query: 141 FPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDY----YKENTKILIDTL 196
             VI     +          IAQ   L  L+++  EA  + V+     Y+    +L++ L
Sbjct: 252 --VIKAMASVSRQSTTSPDTIAQWATLEALTNQ--EASRAFVEMAREAYRRRRDLLLEGL 307
Query: 197 ASLGIKVYGGINAPYVWAHFPGRKSWDV-FAEILEKTHITTVPGSGFGPGGEEYIRISGF 255
            +LG+K      A YV          +V  AE L +  +  VPG+ F   G  ++R+S  
Sbjct: 308 TALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLSYA 365
Query: 256 GHRESILEASRR 267
              E++ +A  R
Sbjct: 366 TSEENLRKALER 377

>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus Length = 382

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 104/252 (41%), Gaps = 28/252 (11%)
Query: 28  LECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII 82
           +E  P   F PD +      T RT  +   SPNNPTG    +  LE L   A  +   ++
Sbjct: 142 VETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 83  FDSAYAAYVTDGCPRSIYEIPG--AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG 140
            D  Y   + +G   S    PG  A E  + ++  +     TG R+G+   P+E      
Sbjct: 202 SDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAXAFAMTGWRIGYACGPKE------ 251
Query: 141 FPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDY----YKENTKILIDTL 196
             VI     +          IAQ   L  L+++  EA  + V+     Y+    +L++ L
Sbjct: 252 --VIKAMASVSSQSTTSPDTIAQWATLEALTNQ--EASRAFVEMAREAYRRRRDLLLEGL 307
Query: 197 ASLGIKVYGGINAPYVWAHFPGRKSWDV-FAEILEKTHITTVPGSGFGPGGEEYIRISGF 255
            +LG+K      A YV          +V  AE L +  +  VPG+ F   G  ++R+S  
Sbjct: 308 TALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLSYA 365
Query: 256 GHRESILEASRR 267
              E++ +A  R
Sbjct: 366 TSEENLRKALER 377

>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I In Pmp Form Length = 422

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 41  KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SI 99
           K TSRT  +   +PNNP G   ++ +LE +    + +  + I D  Y   V DG    SI
Sbjct: 170 KFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISI 229
Query: 100 YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
             +PG  E  + I S  K    TG ++GW + P+ ++
Sbjct: 230 ASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIM 266

>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I Length = 422

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 41  KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SI 99
           K TSRT  +   +PNNP G   ++ +LE +    + +  + I D  Y   V DG    SI
Sbjct: 170 KFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISI 229
Query: 100 YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
             +PG  E  + I S       TG ++GW + P+ ++
Sbjct: 230 ASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHIM 266

>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With Glycerol Length = 422

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 41  KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SI 99
           K TSRT  +   +PNNP G   ++ +LE +    + +  + I D  Y   V DG    SI
Sbjct: 170 KFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISI 229
Query: 100 YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
             +PG  E  + I S       TG ++GW + P+ ++
Sbjct: 230 ASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHIM 266

>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii In Complex With Kynurenine Length = 410

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 41  KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SI 99
           K +S+T  I   +P+NP G   T+ +L+ + +    + ++ I D  Y   V  G     I
Sbjct: 163 KFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKI 222
Query: 100 YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
             +PG  E  I I S  K    TG +LGW++ P  L+
Sbjct: 223 ATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLI 259

>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus Pfu-1397077-001 Length = 406

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 95/242 (39%), Gaps = 21/242 (8%)
Query: 41  KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG---CPR 97
           K T RT  I   +PNNPTG    +  LE+++  A      +I D  Y     +G    P 
Sbjct: 170 KITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPG 229
Query: 98  SI-YEIPGAREVAIEISSFSKFSGFTGVRLGWT--VVPEELLFSSGFPVINDFNRIICTC 154
           S+  ++P      I ++  SK    TG RLG+   V PE  L S     I+   RI   C
Sbjct: 230 SLTKDVP-----VIVMNGLSKVYFATGWRLGYMYFVDPENKL-SEVREAIDRLARIRL-C 282
Query: 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVW 213
            N  +  A   GL       ++ +   +   KE    +   L  + GI       A Y++
Sbjct: 283 PNTPAQFAAIAGLTG----PMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIF 338
Query: 214 AHF---PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA 270
                 P +   +   ++L   H+  V GSGFG  G  + R       E + EA  R E 
Sbjct: 339 PKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEK 398
Query: 271 LF 272
Sbjct: 399 FM 400

>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase (Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70 A Resolution Length = 375

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 100/244 (40%), Gaps = 26/244 (10%)
Query: 34  NNFFPDLKGTSR-----TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88
           N + PDL+   +     T  I   + NNPTG    +  LE+LVE A   G+ I+ D  Y 
Sbjct: 138 NGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXDRTYLEELVEIASEVGAYILSDEVYR 197
Query: 89  AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN 148
           ++     P SI E+    +  I ++S S      G+R+GW     ++       ++ D+ 
Sbjct: 198 SFSELDVP-SIIEV---YDKGIAVNSLSXTYSLPGIRIGWVAANHQVT-----DILRDYR 248
Query: 149 RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN 208
                C     ++     LA    E LE    +++   EN  IL   +    +  Y  I 
Sbjct: 249 DYTXICAGVFDDLVAQLALAHY-QEILERNRHILE---ENLAILDQWIEEEPLVSY--IR 302
Query: 209 APYVWAHF----PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEA 264
              V   F          D   ++L++  +  VPG+ F   G  Y+R+     +E++++ 
Sbjct: 303 PAVVSTSFVKIAVDXPXEDFCLQLLQEHGVLLVPGNRFERDG--YVRLGFACEQETLIKG 360
Query: 265 SRRL 268
             +L
Sbjct: 361 LEKL 364

>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase Complexed With Pyridoxal 5'-Phosphate Length = 356

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 37/248 (14%)
Query: 34  NNFFPDLKGTSR----TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89
           +N+  DL+G S       +++ CSPNNPTG          L+E  R   +I++ D AY  
Sbjct: 131 DNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGK-AIVVADEAYIE 189
Query: 90  YVTDGCPRS-----IYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI 144
           +    CP++     + E P    +AI + + SK     G+R G+T+  EE        VI
Sbjct: 190 F----CPQASLAGWLAEYP---HLAI-LRTLSKAFALAGLRCGFTLANEE--------VI 233
Query: 145 NDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKV 203
           N   ++I   +  ++ +A     A LS +G+ A+   V       + LI  L  +  ++ 
Sbjct: 234 NLLMKVIAP-YPLSTPVADIAAQA-LSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQ 291
Query: 204 YGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILE 263
                  Y+ A F  + S  VF  + ++  I  +      P     +RI+  G RE   E
Sbjct: 292 VFDSETNYILARF--KASSAVFKSLWDQGII--LRDQNKQPSLSGCLRIT-VGTRE---E 343
Query: 264 ASRRLEAL 271
           + R ++AL
Sbjct: 344 SQRVIDAL 351

>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia Coli Identify A Methionine Aminotransferase Function. Length = 386

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 15/235 (6%)
Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY-VTDGCPRSIYE 101
           + RT ++   +P+NP+     Q     L +    +   +I D  Y     +     S+  
Sbjct: 161 SERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLA 220
Query: 102 IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161
            P  RE A+ +SSF K    TG ++G+ V P  +        I   ++ +    N  + +
Sbjct: 221 HPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAE-----IRKVHQYLTFSVNTPAQL 275
Query: 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKS 221
           A A  L       L    ++ D+Y++   IL++ L    +++       ++   +    +
Sbjct: 276 ALADMLRAEPEHYL----ALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVST 331
Query: 222 WD--VFAEILEKTH-ITTVPGSGF--GPGGEEYIRISGFGHRESILEASRRLEAL 271
            D   F + L + H +  +P S F   P   + IR+       ++L A+ RL  L
Sbjct: 332 LDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL 386

>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate Aminotransferase Complexed With L-Histidinol Length = 356

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 37/248 (14%)
Query: 34  NNFFPDLKGTSR----TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89
           +N+  DL+G S       +++ CSPNNPTG          L+E  R   +I++ D AY  
Sbjct: 131 DNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGK-AIVVADEAYIE 189
Query: 90  YVTDGCPRS-----IYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI 144
           +    CP++     + E P    +AI + + SK     G+R G+T+  EE        VI
Sbjct: 190 F----CPQASLAGWLAEYP---HLAI-LRTLSKAFALAGLRCGFTLANEE--------VI 233
Query: 145 NDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKV 203
           N   ++I   +  ++ +A     A LS +G+ A    V       + LI  L  +  ++ 
Sbjct: 234 NLLXKVIAP-YPLSTPVADIAAQA-LSPQGIVAXRERVAQIIAEREYLIAALKEIPCVEQ 291
Query: 204 YGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILE 263
                  Y+ A F  + S  VF  + ++  I  +      P     +RI+  G RE   E
Sbjct: 292 VFDSETNYILARF--KASSAVFKSLWDQGII--LRDQNKQPSLSGCLRIT-VGTRE---E 343
Query: 264 ASRRLEAL 271
           + R ++AL
Sbjct: 344 SQRVIDAL 351

>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii, Plp-Bound Form Length = 410

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 41  KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SI 99
           K +S+T  I   +P+NP G   T+ +L+ + +    + ++ I D  Y   V  G     I
Sbjct: 163 KFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKI 222
Query: 100 YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
             +PG  E  I I S       TG +LGW++ P  L+
Sbjct: 223 ATLPGMWERTITIGSAGXTFSVTGWKLGWSIGPAHLI 259

>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803) From Eubacterium Rectale At 2.10 A Resolution Length = 398

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 28/231 (12%)
Query: 53  SPNNPTGHAATQNQLEQLVEFARNNGS------IIIFDSAYAAYVTDGCPRSIYEIPGAR 106
           SPNNP+G   ++  +++L +              II D  Y   V DG       +    
Sbjct: 180 SPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPF--VTKYY 237
Query: 107 EVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC-----FNGASNI 161
           +  +   S+SK     G R+G+ +VP+E+   +      +    +C       +  A ++
Sbjct: 238 DNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKA------ELYAAVCGAGRALGYVCAPSL 291
Query: 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKS 221
            Q   + C  + G       ++ YKEN  +L + L  +G   +    A Y +       S
Sbjct: 292 FQKXIVKCQGATG------DINAYKENRDLLYEGLTRIGYHCFKPDGAFYXFVKALEDDS 345
Query: 222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272
            + F E  ++  +  V   GFG  G  ++RIS    RE I  +    E ++
Sbjct: 346 -NAFCEKAKEEDVLIVAADGFGCPG--WVRISYCVDREXIKHSXPAFEKIY 393

>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase (Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60 A Resolution Length = 337

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
            SR D +   +P+NPTG A +  +L+QL    R     ++ D  Y  Y +       Y  
Sbjct: 133 VSRDDCVVLANPSNPTGQALSAGELDQL----RQRAGKLLIDETYVDYSSFRARGLAY-- 186
Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
            G  E+     SFSK  G  G+RLG    P EL+
Sbjct: 187 -GENELVFR--SFSKSYGLAGLRLGALFGPSELI 217

>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum In Complex With Pmp Length = 369

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 19  VGKYCNIEYLECGPGNNFFPDLK------GTSRTDIIFFCSPNNPTGHAATQNQLEQLVE 72
           + K  + E++    G +F  D+          + DI+F  +PNNPTG   + + +E+++ 
Sbjct: 132 LAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIIN 191
Query: 73  FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTV 130
            A     I+I D AYA +       ++ E    + V     + SK   F G RLG+ V
Sbjct: 192 VA---PGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSR--TMSKAFDFAGGRLGYFV 244

>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Length = 376

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 19  VGKYCNIEYLECGPGNNFFPDLK------GTSRTDIIFFCSPNNPTGHAATQNQLEQLVE 72
           + K  + E++    G +F  D+          + DI+F  +PNNPTG   + + +E+++ 
Sbjct: 129 LAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIIN 188
Query: 73  FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTV 130
            A     I+I D AYA +       ++ E    + V     + SK   F G RLG+ V
Sbjct: 189 VA---PGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSR--TMSKAFDFAGGRLGYFV 241

>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1) From Helicobacter Pylori 26695 At 2.19 A Resolution Length = 376

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 90/229 (39%), Gaps = 25/229 (10%)
Query: 34  NNFFPDL--KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV 91
           N+F P L  K     D++   SPNNPTG   +  +L   V+ A  +  I+I D  Y+   
Sbjct: 141 NDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIY 200
Query: 92  TDGCPRSIYE---IPG--AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND 146
            +  P S+ E   + G  A +  + I S SK S   G+R G+      LL    +     
Sbjct: 201 ENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLL--EKYKAFRA 258
Query: 147 FNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG 206
           +       +  A+ I +A   A L     E   ++   Y  N K+      +  I  Y  
Sbjct: 259 Y-----LGYTSANAIQKASEAAWLDDRHAEFFRNI---YANNLKLARKIFKNTLIYPYS- 309
Query: 207 INAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPG--GEEYIRIS 253
                 + + P +   +    + +   I T+P    G    G +Y+R++
Sbjct: 310 -----FYVYLPVQNGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLA 353

>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase Length = 429

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 45  RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SIYEIP 103
           +T +I   +P+NP G    + +LE +    +    + + D  Y   V +      I  +P
Sbjct: 182 KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLP 241
Query: 104 GAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
           G  E  I I S  K    TG ++GW   PE LL
Sbjct: 242 GMWERTITIGSAGKTFSLTGWKIGWAYGPEALL 274

>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate Aminotransferase From Listeria Innocua Clip11262. Length = 363

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 39  DLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD 93
           DL+G       +T I++ C+PNNPTG+      ++  ++   ++  +++ D AY  YVT 
Sbjct: 144 DLEGXLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSD-VLVVLDEAYIEYVTP 202
Query: 94  GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
             P    ++    +  I   +FSK  G    R+G+ +  +E++
Sbjct: 203 Q-PEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEII 244

>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate Aminotransferase (Yp_050345.1) From Erwinia Carotovora Atroseptica Scri1043 At 1.80 A Resolution Length = 354

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 48  IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIY-EIPGAR 106
           I++  +PNNPTG     + +E  +     N   I+ D AYA +V D   RSI   I    
Sbjct: 144 IVYLVNPNNPTGTITPADVIEPWIASKPANTXFIV-DEAYAEFVNDPRFRSISPXITQGA 202
Query: 107 EVAIEISSFSKFSGFTGVRLGWTV 130
           E  I + +FSK     G R+G+ V
Sbjct: 203 ENIILLKTFSKIHAXAGXRVGYAV 226

>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698) From Thermotoga Maritima At 2.50 A Resolution Length = 409

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 89/218 (40%), Gaps = 20/218 (9%)
Query: 45  RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG 104
           RT  I   +P NPTG    +++   LVE A  +G  +I D  Y+  V  G   S   I  
Sbjct: 174 RTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIES 233
Query: 105 AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQA 164
            + V I+  S  KFS   G R+G  +   E L S    +     R+         ++   
Sbjct: 234 DKVVVIDSVS-XKFSA-CGARVGCLITRNEELISHAXKLAQ--GRLAPPLLEQIGSV--- 286
Query: 165 GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN-APYVWAHFPGRKS-- 221
            GL  L     + V    + Y+E  + ++  L   G+K +   + A Y+ A  P   +  
Sbjct: 287 -GLLNLDDSFFDFVR---ETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVEDAEE 342
Query: 222 ---WDV--FAEILEKTHITTVPGSGFGPG-GEEYIRIS 253
              W +  F    E T +  + G    PG G++ IRI+
Sbjct: 343 FARWXLTDFNXDGETTXVAPLRGFYLTPGLGKKEIRIA 380

>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Holo-Form (Plp Covalently Bound ) Length = 369

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 19  VGKYCNIEYLECGPGNNFFPDLK------GTSRTDIIFFCSPNNPTGHAATQNQLEQLVE 72
           + K  + E++    G +F  D+          + DI+F  +PNNPTG   + + +E+++ 
Sbjct: 132 LAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIIN 191
Query: 73  FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTV 130
            A     I+I D AYA +       ++ E    + V     + S    F G RLG+ V
Sbjct: 192 VA---PGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSR--TMSXAFDFAGGRLGYFV 244

>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase Length = 429

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Query: 45  RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SIYEIP 103
           +T +I   +P+NP G    + +LE +    +    + + D  Y   V +      I  +P
Sbjct: 182 KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLP 241
Query: 104 GAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
           G  E  I I S       TG ++GW   PE LL
Sbjct: 242 GMWERTITIGSAGXTFSLTGWKIGWAYGPEALL 274

>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase From Clostridium Difficile 630 Crystallized With Magnesium Formate Length = 391

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 99/234 (42%), Gaps = 25/234 (10%)
Query: 48  IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA-- 105
           +   C+P+NP G   T+++L++L +    +   II D  +    +D   +    IP A  
Sbjct: 167 LFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIH----SDIILKKHKHIPMASI 222
Query: 106 ----REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND-FNRIIC---TCFNG 157
                +  I   + +K     G++  + V+P+E      + +++D F RI      CF+ 
Sbjct: 223 SKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDE----KDYKLLDDAFTRIDIKRNNCFSL 278
Query: 158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP 217
            +  A            LE + S +D+     K + + +  L ++   G     +W  F 
Sbjct: 279 VATEASYNNGESWLESFLEYLESNIDFA---IKYINENMPKLKVRKPEG--TYLLWVDFS 333
Query: 218 --GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269
             G    ++ + +++K  +    G+ FG GG  Y RI+    R  + EA  R++
Sbjct: 334 ALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIK 387

>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Salmonella Enterica Length = 364

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
           T   D +F C+PNNPTG    +  L+ + +  ++    +I D A+  ++    P     I
Sbjct: 144 TPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFI----PHETGFI 199
Query: 103 PGAREVA--IEISSFSKFSGFTGVRLGWTV 130
           P  ++      + S +KF    G+RLG+ V
Sbjct: 200 PALKDNPHIWVLRSLTKFYAIPGLRLGYLV 229

>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase (ec 2.6.1.9) (imidazole Acetol-phosphate Transferase) (tm1040) From Thermotoga Maritima At 2.40 A Resolution Length = 347

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 27/148 (18%)
Query: 47  DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAR 106
           D++F  +PNNPTGH   + ++E++++     G+ +  D AY  +  +    S  +     
Sbjct: 152 DVVFIPNPNNPTGHVFEREEIERILK----TGAFVALDEAYYEFHGE----SYVDFLKKY 203
Query: 107 EVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGG 166
           E    I +FSK       R+G+ V  E+         I+ +NR+    FN  S ++Q   
Sbjct: 204 ENLAVIRTFSKAFSLAAQRVGYVVASEKF--------IDAYNRVRLP-FN-VSYVSQMFA 253
Query: 167 LACLSSEGLEAVHSVVDYYKENTKILID 194
              L    +         ++E TK +++
Sbjct: 254 KVALDHREI---------FEERTKFIVE 272

>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc) From Thermotoga Maritima (Apo-Form) Length = 335

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 27/148 (18%)
Query: 47  DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAR 106
           D++F  +PNNPTGH   + ++E++++     G+ +  D AY  +  +    S  +     
Sbjct: 140 DVVFIPNPNNPTGHVFEREEIERILK----TGAFVALDEAYYEFHGE----SYVDFLKKY 191
Query: 107 EVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGG 166
           E    I +FSK       R+G+ V  E+         I+ +NR+    FN  S ++Q   
Sbjct: 192 ENLAVIRTFSKAFSLAAQRVGYVVASEKF--------IDAYNRVRLP-FN-VSYVSQMFA 241
Query: 167 LACLSSEGLEAVHSVVDYYKENTKILID 194
              L    +         ++E TK +++
Sbjct: 242 KVALDHREI---------FEERTKFIVE 260

>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From Thermotoga Maritima Length = 335

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 27/148 (18%)
Query: 47  DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAR 106
           D++F  +PNNPTGH   + ++E++++     G+ +  D AY  +  +    S  +     
Sbjct: 140 DVVFIPNPNNPTGHVFEREEIERILK----TGAFVALDEAYYEFHGE----SYVDFLKKY 191
Query: 107 EVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGG 166
           E    I +FSK       R+G+ V  E+         I+ +NR+    FN  S ++Q   
Sbjct: 192 ENLAVIRTFSKAFSLAAQRVGYVVASEKF--------IDAYNRVRLP-FN-VSYVSQXFA 241
Query: 167 LACLSSEGLEAVHSVVDYYKENTKILID 194
              L    +         ++E TK +++
Sbjct: 242 KVALDHREI---------FEERTKFIVE 260

>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Porphyromonas Gingivalis Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 44  SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIP 103
           S  D  + C+PNNP G    + ++ +L+    +  +  + D +Y ++ T+   R   +I 
Sbjct: 128 SNXDFCWLCNPNNPDGRLLQRTEILRLLN--DHPDTTFVLDQSYVSFTTEEVIRPA-DIK 184
Query: 104 GAREVAIEISSFSKFSGFTGVRLGWTVVPEEL 135
           G R+  + + SFS   G  G+R+G+ V  ++ 
Sbjct: 185 G-RKNLVXVYSFSHAYGIPGLRIGYIVANKDF 215

>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate Aminotransferase (Substrate Free Form), From Thermus Thermophilus Hb27 Length = 397

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 33/265 (12%)
Query: 21  KYCNIEYLECGPGNNFFPDLKGTSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNNGS 79
           ++  +   E GP  +   ++    R   ++   S  NPTG        ++L++     G 
Sbjct: 138 RFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGL 197
Query: 80  IIIFDSAYAA-YVTDGCPRSIYEIPGAREV----AIEISSFSKFSGFTGVRLGWTVVPEE 134
           +++ D AY   Y  +    S++E+  ARE      I + SFSK     G+R+ + V   E
Sbjct: 198 VVVEDDAYRELYFGEARLPSLFEL--AREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPE 254
Query: 135 LLFSSGFPVINDFNRIICTCFNGA---SNIAQAGGLACLSSEGL-EAVHSVVDYYKENTK 190
            L            + +     GA   + +     +  L  EG  E +  V   Y+E  +
Sbjct: 255 AL------------QKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQ 302
Query: 191 ILIDTL---ASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGF--GP 244
            ++  L       ++        +VW   P G  +  +F   LE+ ++  VPG  F    
Sbjct: 303 AMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEE-NVAFVPGGPFFANG 361
Query: 245 GGEEYIRIS-GFGHRESILEASRRL 268
           GGE  +R+S     RE I E  RRL
Sbjct: 362 GGENTLRLSYATLDREGIAEGVRRL 386

>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis Length = 411

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC---PRSI 99
           T RT  +   SP+NPTG   +  +L  + E A     ++I D  Y   V D     P + 
Sbjct: 158 TPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAG 217
Query: 100 YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
           ++  G  E  I ISS +     TG ++GW   P EL+
Sbjct: 218 FD--GMAERTITISSAAXMFNCTGWKIGWACGPAELI 252

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	272
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	1e-135
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	1e-128
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	1e-118
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	2e-53
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	4e-53
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	2e-49
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	2e-42
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	1e-41
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	9e-41
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	6e-40
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	2e-39
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	2e-37
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	6e-35
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	1e-31
3nra_A	407	Aspartate aminotransferase; structural genomics, j	4e-31
3ele_A	398	Amino transferase; RER070207001803, structural gen	5e-31
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	8e-31
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	2e-30
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	7e-30
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	2e-29
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	2e-29
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	4e-29
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	2e-28
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	3e-28
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	5e-28
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	6e-28
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	1e-27
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	2e-27
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	3e-27
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	1e-26
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	5e-26
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	1e-25
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	3e-25
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	4e-25
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	4e-25
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	5e-25
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	2e-24
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	1e-23
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	8e-23
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	1e-22
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	5e-22
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	6e-22
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	5e-21
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	6e-21
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	6e-21
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	8e-21
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	4e-20
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	8e-20
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	3e-19
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	4e-19
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	1e-18
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	1e-18
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	2e-18
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	3e-16
1vp4_A	425	Aminotransferase, putative; structural genomics, j	4e-16
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	2e-15
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	7e-13
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	9e-13
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	1e-12
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	1e-11
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	4e-11
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	1e-08
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	2e-08
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	3e-08
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	4e-08
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	5e-08
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	7e-08
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	7e-08

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A* Length = 432

 Score =  387 bits (996), Expect = e-135
 Identities = 191/272 (70%), Positives = 224/272 (82%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AY+DSSVI+GQ G    +V KY NIEY+ C P N FFPDL    RTDIIFFCSPNNPTG 
Sbjct: 154 AYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGA 213

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG 120
           AAT+ QL QLVEFA+ NGSII++DSAYA Y++D  PRSI+EIPGA EVA+E +SFS ++G
Sbjct: 214 AATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAG 273

Query: 121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           FTGVRLGWTV+P++LL+S GFPV  DFNRIICTCFNGASNI+QAG LACL+ EGLEA+H 
Sbjct: 274 FTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHK 333

Query: 181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS 240
           V+ +YKENT I+IDT  SLG  VYGG NAPYVW HFP + SWDVFAEILEKTH+ T PGS
Sbjct: 334 VIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGS 393

Query: 241 GFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           GFGPGGE ++R+S FGHRE+ILEA RR + L+
Sbjct: 394 GFGPGGEGFVRVSAFGHRENILEACRRFKQLY 425

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Length = 449

 Score =  371 bits (954), Expect = e-128
 Identities = 161/273 (58%), Positives = 208/273 (76%), Gaps = 3/273 (1%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
            Y+D+SV++G  GD       +  IEY+ C P N+FFPDL    RTDIIFFCSPNNPTG 
Sbjct: 167 VYVDTSVMMGMTGDHNG--TGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGA 224

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFS 119
           AAT+ QL +LV FAR NGSI+++D+AYA Y+++  CP++IYEIPGA EVAIE  SFSK++
Sbjct: 225 AATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYA 284

Query: 120 GFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVH 179
           GFTGVRLGWTVVP+ L +++G PV  D+NR++ TCFNGASNI QAGGLACL  EGL+ ++
Sbjct: 285 GFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMN 344

Query: 180 SVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPG 239
           +++ +YKEN +IL  T   +G  VYGG +APY+W  FPG+ SWDVFAEILE+ +I T PG
Sbjct: 345 AMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWVGFPGKPSWDVFAEILERCNIVTTPG 404

Query: 240 SGFGPGGEEYIRISGFGHRESILEASRRLEALF 272
           SG+GP GE ++R S FG RE+ILEA RR +  +
Sbjct: 405 SGYGPAGEGFVRASAFGSRENILEAVRRFKEAY 437

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A* Length = 400

 Score =  343 bits (882), Expect = e-118
 Identities = 111/272 (40%), Positives = 154/272 (56%), Gaps = 17/272 (6%)

Query: 1   AYIDSSVIVGQAGDLEDEVGKYCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGH 60
           AY+D + + G              I  L C   N FFP+    +  DI+  CSPNNPTG 
Sbjct: 130 AYLDIARLTGAK-----------EIIALPCLQENAFFPEFPEDTHIDILCLCSPNNPTGT 178

Query: 61  AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFS 119
              ++QL  +V +A  +  +I+FD+AY+ +++D   P+SI+EIP AR  AIEI+SFSK  
Sbjct: 179 VLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPL 238

Query: 120 GFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVH 179
           GF G+RLGWTV+P+EL ++ G  VI D+ R + T FNGAS  AQ  G+A LS        
Sbjct: 239 GFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILP---QL 295

Query: 180 SVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKTHITTV 237
             + YY+EN+ +L   L + G +V+GG +APY+W           D+F   L + HI   
Sbjct: 296 EAIHYYRENSDLLRKALLATGFEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYHIAIT 355

Query: 238 PGSGFGPGGEEYIRISGFGHRESILEASRRLE 269
           PG GFG  G  ++R S  G RE IL A  RL+
Sbjct: 356 PGIGFGRSGSGFVRFSSLGKREDILAACERLQ 387

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa} Length = 412

 Score =  177 bits (452), Expect = 2e-53
 Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 21/260 (8%)

Query: 24  NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78
            +  +   PG +FF +L+        +  ++    P+NPT      +  E++V  A+   
Sbjct: 146 QVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYD 205

Query: 79  SIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF 137
            +++ D AYA  V DG    SI ++PGA+++A+E  + SK     G R+G+ V   EL  
Sbjct: 206 VMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPEL-- 263

Query: 138 SSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA 197
                 ++   RI      G     Q   +A L     + V  +   Y++   +L+  L 
Sbjct: 264 ------VSALARIKSYHDYGTFTPLQVAAIAALEG-DQQCVRDIARQYQQRRDVLVKGLR 316

Query: 198 SLGIKVYGGINAPYVWAHFP----GRKSWDVFAE-ILEKTHITTVPGSGFGPGGEEYIRI 252
             G  V     + YVWA  P       S + FA+ +L+   ++  PG GFG  G++++R 
Sbjct: 317 EAGWMVENPKASMYVWAKIPEPYAHLGSLE-FAKKLLQDAKVSVSPGIGFGDYGDDHVRF 375

Query: 253 SGFGHRESILEASRRLEALF 272
           +   +R+ + +A R ++A+F
Sbjct: 376 ALIENRDRLRQAVRGIKAMF 395

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus} Length = 404

 Score =  176 bits (449), Expect = 4e-53
 Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 15/244 (6%)

Query: 34  NNFFPDL-----KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88
            ++ PD      +   +T +I+   PNNPTG  AT+   ++ +   +   + I+ D AY 
Sbjct: 165 PHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYG 224

Query: 89  AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN 148
           A+  D    SI      ++VAIEI S SK    +G R+G+ V  +++        I    
Sbjct: 225 AFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDM--------IQALK 276

Query: 149 RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN 208
           +       G     Q   +  L+    + +    + +K         LA   +       
Sbjct: 277 KYQTHTNAGMFGALQDAAIYALNH-YDDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKG 335

Query: 209 APYVWAHFPGRKSWDVFAE-ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRR 267
             YVW   P     + F + ++++  I   PG  FG  G  Y+RIS     + + EA+ R
Sbjct: 336 GIYVWLETPPGYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIR 395

Query: 268 LEAL 271
           L  L
Sbjct: 396 LTEL 399

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus} Length = 376

 Score =  166 bits (422), Expect = 2e-49
 Identities = 64/249 (25%), Positives = 100/249 (40%), Gaps = 25/249 (10%)

Query: 34  NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88
            +   DLK           ++    PNNPTG  A     E+ +  AR +G  +I D+ Y 
Sbjct: 142 EDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYV 201

Query: 89  AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN 148
             V +G   S   +PGA+E  +E+ S SK     G RLG+ +  EE         +    
Sbjct: 202 DQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEA--------LARLE 253

Query: 149 RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN 208
           R+               G+  L +   E V      Y+E    + + L  +       + 
Sbjct: 254 RVKGVIDFNQYAGVLRMGVEALKT-PKEVVRGYARVYRERALGMAEALKGV-----LSLL 307

Query: 209 AP----YVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILE 263
            P    Y+W   P G    + F   L +  +   PG GFGPGG+ ++RI+     E +LE
Sbjct: 308 PPRATMYLWGRLPEGVDDLE-FGLRLVERGVALAPGRGFGPGGKGFVRIALVRPLEELLE 366

Query: 264 ASRRLEALF 272
           A++R+    
Sbjct: 367 AAKRIREAL 375

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} Length = 376

 Score =  148 bits (375), Expect = 2e-42
 Identities = 49/263 (18%), Positives = 84/263 (31%), Gaps = 33/263 (12%)

Query: 23  CNIEYLECGPGNNFFPDL--KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI 80
                +     N+F P L  K     D++   SPNNPTG   +  +L   V+ A  +  I
Sbjct: 130 AKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFI 189

Query: 81  IIFDSAYAAYVTDGCPRSIYEI-----PGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL 135
           +I D  Y+    +  P S+ E        A +  + I S SK S   G+R G+      L
Sbjct: 190 LINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRL 249

Query: 136 LFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT 195
                   +  +          ++N  Q    A    +         + Y  N K+    
Sbjct: 250 --------LEKYKAFRAYLGYTSANAIQKASEAAWLDD--RHAEFFRNIYANNLKLARKI 299

Query: 196 LASLGIKVYGGINAP----YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPG--GEEY 249
                              YV+         +    + +   I T+P    G    G +Y
Sbjct: 300 F--------KNTLIYPYSFYVYLPVQ--NGENFAKTLYQNEGIITLPALYLGRNRIGADY 349

Query: 250 IRISGFGHRESILEASRRLEALF 272
           +R++       + +    +E   
Sbjct: 350 VRLALVYDTPLLEKPLEIIETYR 372

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3} Length = 391

 Score =  146 bits (370), Expect = 1e-41
 Identities = 73/259 (28%), Positives = 101/259 (38%), Gaps = 33/259 (12%)

Query: 27  YLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFD 84
            L   P N   P            +   SP NPTG       +  L+E A+  G+  I D
Sbjct: 141 DLPTAPENRLQPVPADFAGLDLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISD 200

Query: 85  SAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI 144
             Y     +    +  E+    +    I+SFSK+   TG R+GW VVPE+ +      V+
Sbjct: 201 EIYHGIEYEAKAVTALEL---TDECYVINSFSKYFSMTGWRVGWMVVPEDQV-----RVV 252

Query: 145 NDF--NRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202
                N  IC     A + +Q   LA L  +    + + +D YK N K++++ L   G  
Sbjct: 253 ERIAQNMFIC-----APHASQVAALAAL--DCDAELQANLDVYKANRKLMLERLPKAGFT 305

Query: 203 VYGGINAP----YVWA---HFPGRKSWDVFAE-ILEKTHITTVPGSGFGP-GGEEYIRIS 253
               I  P    YV+A         S   FA  ILEK  +   PG  F P  G   +R S
Sbjct: 306 R---IAPPDGAFYVYADVSDL-TDDSRA-FAAEILEKAGVAVTPGLDFDPERGAGTLRFS 360

Query: 254 GFGHRESILEASRRLEALF 272
                  I E   RLEA  
Sbjct: 361 YARATADIEEGLDRLEAFM 379

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Length = 437

 Score =  144 bits (366), Expect = 9e-41
 Identities = 48/275 (17%), Positives = 85/275 (30%), Gaps = 30/275 (10%)

Query: 27  YLECGPGNNFFPDLK-----GTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
             +           K      T +   I + +PNNPT    T  +L  + E A  +  I+
Sbjct: 159 SFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIV 218

Query: 82  IFDSAYA------AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL 135
           I D AY        Y   G P     +    +  I   S SK   + G R+G  ++  +L
Sbjct: 219 IEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKL 278

Query: 136 LFSSGFPVINDFNRIICTCF----------NGASNIAQAGGLACL--SSEGLEAVHSVVD 183
                  +   F R+               +GA++ AQ G  A L   ++G       V 
Sbjct: 279 YEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVI 338

Query: 184 YYKENTKILIDTLASLGIKVYGGINAP------YVWA-HFPGRKSWDVFAEILEKTHITT 236
            Y    +I+       G  +    +        + +   + G  S  +  + +       
Sbjct: 339 EYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYKGMDSSKLIEKFVRYGMCAI 398

Query: 237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271
              +      E     +         +  +RL+ L
Sbjct: 399 TLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQML 433

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491} Length = 396

 Score =  141 bits (359), Expect = 6e-40
 Identities = 61/270 (22%), Positives = 103/270 (38%), Gaps = 36/270 (13%)

Query: 23  CNIEYLECGPGNNFFPDLKGTS-----RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77
             I +  C P  +F PD +  S     RT ++F CSPNNP+G     +  +++ +     
Sbjct: 142 GEIHFANC-PAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKY 200

Query: 78  GSIIIFDSAYAAYVTDGC-PRSIYEIP----GAREVAIEISSFSKFSGFTGVRLGWTVVP 132
           G II  D  Y+    DG  P    +       +R+  +  +S SK S   G+R G+    
Sbjct: 201 GFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGD 260

Query: 133 EELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKIL 192
            EL        + +F        +  S   Q   +A    E  + V      Y+E  + +
Sbjct: 261 AEL--------LKNFLLYRTYHGSAMSIPVQRASIAAWDDE--QHVIDNRRLYQEKFERV 310

Query: 193 IDTLASLGIKVYGGINAP----YVWAHFPGRKSWDVFAEILEKTHITTVPGSGF------ 242
           I  L  +       +  P    Y+W   P          + +K  I  +PG         
Sbjct: 311 IPILQQV-----FDVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVLPGRFLARDTEQ 365

Query: 243 GPGGEEYIRISGFGHRESILEASRRLEALF 272
           G  GE Y+RI+      + ++A+  + +L+
Sbjct: 366 GNPGEGYVRIALVADVATCVKAAEDIVSLY 395

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii} Length = 370

 Score =  139 bits (353), Expect = 2e-39
 Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 17/230 (7%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
           + +T  I   SP+NP G         ++ EFA  N   II D  Y   V +G   S  E 
Sbjct: 152 SDKTKAIIINSPSNPLGEVID----REIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEF 207

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162
               E  I I+ FSK    TG R+G+ +  +E+        I    ++    F  A  I+
Sbjct: 208 DENLEKTILINGFSKLYAMTGWRIGYVISNDEI--------IEAILKLQQNLFISAPTIS 259

Query: 163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--GRK 220
           Q   L     E    ++S++  +    ++++  +   G +V   I A YV   FP  G  
Sbjct: 260 QYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYV---FPNIGED 316

Query: 221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA 270
             +   ++L++  +   PG GFG  G+ YIRIS     E+I E   R++ 
Sbjct: 317 GREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIKE 366

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Length = 375

 Score =  134 bits (341), Expect = 2e-37
 Identities = 51/255 (20%), Positives = 94/255 (36%), Gaps = 22/255 (8%)

Query: 23  CNIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77
             ++  +    N + PDL+         T +I   + NNPTG    +  LE+LVE A   
Sbjct: 127 AEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEV 186

Query: 78  GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF 137
           G+ I+ D  Y ++     P     I    +  I ++S SK     G+R+GW     ++  
Sbjct: 187 GAYILSDEVYRSFSELDVP----SIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVT- 241

Query: 138 SSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA 197
                   D+  +IC     A           L +   E +       +EN  IL   + 
Sbjct: 242 -DILRDYRDYT-MIC-----AGVFDDLVAQLAL-AHYQEILERNRHILEENLAILDQWIE 293

Query: 198 SL-GIKVYGGINAPYVWAHFPGRKSWDVFAE-ILEKTHITTVPGSGFGPGGEEYIRISGF 255
               +           +         + F   +L++  +  VPG+ F    + Y+R+   
Sbjct: 294 EEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRF--ERDGYVRLGFA 351

Query: 256 GHRESILEASRRLEA 270
             +E++++   +L  
Sbjct: 352 CEQETLIKGLEKLSQ 366

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A* Length = 389

 Score =  128 bits (324), Expect = 6e-35
 Identities = 69/257 (26%), Positives = 103/257 (40%), Gaps = 25/257 (9%)

Query: 27  YLECGPGNNFFP---DLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
            +     + F     +LK   T +T  +   SP NPTG   T+  LE++ +F   +  I+
Sbjct: 137 EVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIV 196

Query: 82  IFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG 140
           I D  Y  ++ D     SI  + G  E  I ++ FSK    TG RLG+   P  +     
Sbjct: 197 ISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI----- 251

Query: 141 FPVINDFNRIICTCFNGASNIAQAGGLACL-SSEGLEAVHSVVDYYKENTKILIDTLASL 199
              I    +             Q      L      +AV  +   Y    K++   L  +
Sbjct: 252 ---IERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM 308

Query: 200 GIKVYGGINAPYVWAHFP-----GRKSWDVFAE-ILEKTHITTVPGSGFGPGGEEYIRIS 253
           G+       A Y+   FP     G  S   F+E +L++  +  VPGS FG  GE Y+RIS
Sbjct: 309 GLPTVKPKGAFYI---FPRIRDTGLTSKK-FSELMLKEARVAVVPGSAFGKAGEGYVRIS 364

Query: 254 GFGHRESILEASRRLEA 270
                E + EA  R+E 
Sbjct: 365 YATAYEKLEEAMDRMER 381

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4} Length = 444

 Score =  120 bits (302), Expect = 1e-31
 Identities = 53/285 (18%), Positives = 101/285 (35%), Gaps = 42/285 (14%)

Query: 7   VIVGQAGDLEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQN 65
            I     D E+   KY  + E LE  P            R   I    P NPTG+  T  
Sbjct: 174 HIDEVTHDGEEGFFKYRVDFEALENLPA-------LKEGRIGAICCSRPTNPTGNVLTDE 226

Query: 66  QLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVR 125
           ++  L E A+     +I D+AY     +      +         I   S SK  G  G+R
Sbjct: 227 EMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAH--LNWDNNTILCFSLSKI-GLPGMR 283

Query: 126 LGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVH--SVVD 183
            G  V   +++       ++  N ++       +    A     ++++ ++ +    +  
Sbjct: 284 TGIIVADAKVI-----EAVSAMNAVVNLA---PTRFGAAIATPLVANDRIKQLSDNEIKP 335

Query: 184 YYKENTKILIDTL----ASLGIKVY---GGINAPYVWAHFP--GRKSWDVFAEILEKTHI 234
           +Y++   + +  L        + ++   G I   ++W  F      + D   E L+    
Sbjct: 336 FYQKQATLAVKLLKQALGDYPLMIHKPEGAI---FLWLWFKDLPISTLD-LYERLKAKGT 391

Query: 235 TTVPGSGFGPG--------GEEYIRISGFGHRESILEASRRLEAL 271
             VP   F PG          E IR+S     +++++  + +  +
Sbjct: 392 LIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEV 436

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides} Length = 407

 Score =  118 bits (298), Expect = 4e-31
 Identities = 42/237 (17%), Positives = 80/237 (33%), Gaps = 20/237 (8%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYE 101
            +   +  F +PNNP G   +  ++ Q+   A   G+ +I D  Y+     G     +  
Sbjct: 177 KAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRA 236

Query: 102 IPGA-REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160
                 E  + I   SK    +G RLG       +        I    ++       A+ 
Sbjct: 237 EAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAI--------IARMEKLQAIVSLRAAG 288

Query: 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP-- 217
            +QA        E    +   +  ++     L+  L    G+         Y+   FP  
Sbjct: 289 YSQAVLRGWF-DEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYL---FPRL 344

Query: 218 ---GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271
                   +    +  +  +   PG+ F P   + +R++     E+ + A+RR+  L
Sbjct: 345 PKLAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTL 401

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale} Length = 398

 Score =  118 bits (297), Expect = 5e-31
 Identities = 53/251 (21%), Positives = 93/251 (37%), Gaps = 27/251 (10%)

Query: 34  NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS------III 82
            +F  D         + T  +   SPNNP+G   ++  +++L +              II
Sbjct: 156 EHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFII 215

Query: 83  FDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFP 142
            D  Y   V DG    +  +    +  +   S+SK     G R+G+ +VP+E+       
Sbjct: 216 ADEPYREIVYDG--IKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVY-DKAEL 272

Query: 143 VINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK 202
                       +  A ++ Q   + C  +         ++ YKEN  +L + L  +G  
Sbjct: 273 YAAVCGAGRALGYVCAPSLFQKMIVKCQGAT------GDINAYKENRDLLYEGLTRIGYH 326

Query: 203 VY--GGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRES 260
            +   G  A Y++       S   F E  ++  +  V   GF  G   ++RIS    RE 
Sbjct: 327 CFKPDG--AFYMFVKALEDDSNA-FCEKAKEEDVLIVAADGF--GCPGWVRISYCVDREM 381

Query: 261 ILEASRRLEAL 271
           I  +    E +
Sbjct: 382 IKHSMPAFEKI 392

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1 Length = 389

 Score =  117 bits (295), Expect = 8e-31
 Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 24/252 (9%)

Query: 27  YLECGPGNNFFP---DLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
            +E     NF P   +++G    +T  +   SPNNPTG    +  LE LV  A+     I
Sbjct: 151 VVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYI 210

Query: 82  IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF 141
           I D  Y + V      SI ++    +  + I+ FSK    TG R+G+ +  E++      
Sbjct: 211 ISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKV------ 264

Query: 142 PVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI 201
                 ++I     +  + +AQ   L  L  +       +V  +KE    +++ L  +G+
Sbjct: 265 --ATAVSKIQSHTTSCINTVAQYAALKALEVD----NSYMVQTFKERKNFVVERLKKMGV 318

Query: 202 KVYGGINAPYVWAHFPG-RKSWDVFAE-ILEKTHITTVPGSGFGPGGEEYIRISGFGHRE 259
           K      A Y+   F   R     F E +LE+  +  VPGS F      ++R+S     E
Sbjct: 319 KFVEPEGAFYL---FFKVRGDDVKFCERLLEEKKVALVPGSAF--LKPGFVRLSFATSIE 373

Query: 260 SILEASRRLEAL 271
            + EA  R+E  
Sbjct: 374 RLTEALDRIEDF 385

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score =  116 bits (292), Expect = 2e-30
 Identities = 46/237 (19%), Positives = 95/237 (40%), Gaps = 19/237 (8%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYE 101
           + RT ++   +P+NP+     Q     L +    +   +I D  Y           S+  
Sbjct: 161 SERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLA 220

Query: 102 IPGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160
            P  RE A+ +SSF K +   TG ++G+ V P  +   +    ++ +       F+  + 
Sbjct: 221 HPQLRERAVAVSSFGKTYH-MTGWKVGYCVAPAPIS--AEIRKVHQY-----LTFSVNTP 272

Query: 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYV---WAHFP 217
            AQ      L     E   ++ D+Y++   IL++ L    +++       ++   ++   
Sbjct: 273 -AQLALADML-RAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVS 330

Query: 218 GRKSWDVFAE-ILEKTHITTVPGSGFG--PGGEEYIRISGFGHRESILEASRRLEAL 271
                + F + + ++  +  +P S F   P   + IR+       ++L A+ RL  L
Sbjct: 331 TLDDVE-FCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL 386

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A* Length = 427

 Score =  115 bits (289), Expect = 7e-30
 Identities = 47/281 (16%), Positives = 80/281 (28%), Gaps = 58/281 (20%)

Query: 22  YCNIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76
           +          G  +  +             I    SPNNP G           +  A  
Sbjct: 168 FREQTKYFDKKGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGL----------LRHAVI 217

Query: 77  NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
            G   I+D  Y  Y     P     I    +  I + + SKF+G +G R GW ++ +E  
Sbjct: 218 KGCKSIYDMVY--YWPHYTP-----IKYKADEDILLFTMSKFTGHSGSRFGWALIKDE-- 268

Query: 137 FSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL 196
                 V N+    +     G     Q   L  L  E +  V +     ++        L
Sbjct: 269 -----SVYNNLLNYMTKNTEGTPRETQLRSLKVL-KEVVAMVKTQKGTMRDLNTFGFKKL 322

Query: 197 ASLGIKVYGGINA--------------------------PYVWAHFPGRKSWDVFAEILE 230
               + +   ++                            Y W      +  D   +  +
Sbjct: 323 RERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDC-YQTFQ 381

Query: 231 KTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271
              I T  G GF      Y+R+S    ++   +    L+ +
Sbjct: 382 NGRINTQNGVGFEASS-RYVRLSLIKTQDDFDQLMYYLKDM 421

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score =  113 bits (286), Expect = 2e-29
 Identities = 58/262 (22%), Positives = 92/262 (35%), Gaps = 33/262 (12%)

Query: 32  PGNNFFPDL-----KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA 86
            G  F  D        T RT  +   SP+NPTG   +  +L  + E A     ++I D  
Sbjct: 142 DGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEV 201

Query: 87  YAAYVTDGCP-RSIYEIPGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVI 144
           Y   V D      +    G  E  I ISS +K F+  TG ++GW   P EL+  +G    
Sbjct: 202 YEHLVFDHARHLPLAGFDGMAERTITISSAAKMFN-CTGWKIGWACGPAELI--AGVRAA 258

Query: 145 NDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY 204
             +       + G +   Q      L       V ++ +  +     L   L  +G  V+
Sbjct: 259 KQY-----LSYVGGAP-FQPAVALAL-DTEDAWVAALRNSLRARRDRLAAGLTEIGFAVH 311

Query: 205 GGINAPYV---WAHFPGRKSWDVFAE-ILEKTHITTVPGSGFGPGGEE-----------Y 249
                 ++           S + F   + EK  +  +P S F                  
Sbjct: 312 DSYGTYFLCADPRPLGYDDSTE-FCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHL 370

Query: 250 IRISGFGHRESILEASRRLEAL 271
           +R +     +++ EA RRL  L
Sbjct: 371 VRFTFCKRDDTLDEAIRRLSVL 392

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Length = 416

 Score =  113 bits (286), Expect = 2e-29
 Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 25/262 (9%)

Query: 27  YLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
           +  C P N++  DL         +T ++   +P+NP G   ++  +E +V  A      +
Sbjct: 154 FYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPL 213

Query: 82  IFDSAYAAYVTDGCPR-----SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
             D  YA  V  G        S+ +        + +   +K     G RLGW +  +   
Sbjct: 214 FSDEIYAGMVFKGKDPNATFTSVADFETTVPR-VILGGTAKNLVVPGWRLGWLLYVDPHG 272

Query: 137 FSSGF-PVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT 195
               F   +     ++C    G   + QA     L +   E +  +V   +E+   L + 
Sbjct: 273 NGPSFLEGLKRVGMLVC----GPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNH 328

Query: 196 LASL-GIKVYGGINAPYVW-----AHFPGRKSWDVFAE-ILEKTHITTVPGSGFGPGGEE 248
           +    G+       A Y+        +   K+   F E +LE+ ++  +PG+ F      
Sbjct: 329 IGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIF--HAPG 386

Query: 249 YIRISGFGHRESILEASRRLEA 270
           + R++     E   EA  R++A
Sbjct: 387 FTRLTTTRPVEVYREAVERIKA 408

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Length = 406

 Score =  113 bits (284), Expect = 4e-29
 Identities = 59/254 (23%), Positives = 93/254 (36%), Gaps = 18/254 (7%)

Query: 27  YLECGPGNNFFPDL-----KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
                   ++ PD+     K T RT  I   +PNNPTG    +  LE+++  A      +
Sbjct: 151 EYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPV 210

Query: 82  IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF 141
           I D  Y     +G   S   +       I ++  SK    TG RLG+    +     S  
Sbjct: 211 ISDEIYDLMTYEGEHISPGSLTK-DVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEV 269

Query: 142 PVINDF--NRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199
               D      +C      +  AQ   +A L +  ++ +   +   KE    +   L  +
Sbjct: 270 REAIDRLARIRLC-----PNTPAQFAAIAGL-TGPMDYLKEYMKKLKERRDYIYKRLNEI 323

Query: 200 -GIKVYGGINAPYVWA---HFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF 255
            GI       A Y++      P +   +   ++L   H+  V GSGFG  G  + R    
Sbjct: 324 PGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL 383

Query: 256 GHRESILEASRRLE 269
              E + EA  R E
Sbjct: 384 PPIEILEEAMDRFE 397

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1 Length = 409

 Score =  111 bits (279), Expect = 2e-28
 Identities = 54/239 (22%), Positives = 88/239 (36%), Gaps = 26/239 (10%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
             RT  I   +P NPTG    ++++  LVE A  +G  +I D  Y+  V  G   S   I
Sbjct: 172 NERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSI 231

Query: 103 PGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161
              +   + I S SK FS   G R+G  +   E L S            +         +
Sbjct: 232 ESDK--VVVIDSVSKKFS-ACGARVGCLITRNEELISHA--------MKLAQGRLAPPLL 280

Query: 162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVY--GGINAPYVWAHFPG 218
            Q G +  L+         V + Y+E  + ++  L      +     G  A Y+ A  P 
Sbjct: 281 EQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSG--AFYITAELPV 337

Query: 219 RKSWDVFAEILEKTHITT-----VPGSGFGPG---GEEYIRISGFGHRESILEASRRLE 269
             + +    +L   ++        P  GF      G++ IRI+    ++ +  A   L 
Sbjct: 338 EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLM 396

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A* Length = 385

 Score =  110 bits (277), Expect = 3e-28
 Identities = 58/253 (22%), Positives = 96/253 (37%), Gaps = 20/253 (7%)

Query: 27  YLECGPGNNFFP---DLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
            +E  P   F P    ++   T RT  +   SPNNPTG    +  LE L   A  +   +
Sbjct: 141 EVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYL 200

Query: 82  IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF 141
           + D  Y   + +G   S   +       + ++  +K    TG R+G+   P+E+      
Sbjct: 201 VSDEIYEHLLYEGEHFSPGRVAPEH--TLTVNGAAKAFAMTGWRIGYACGPKEV------ 252

Query: 142 PVINDFNRIICTCFNGASNIAQAGGLACLS--SEGLEAVHSVVDYYKENTKILIDTLASL 199
             I     +          IAQ   L  L+        V    + Y+    +L++ L +L
Sbjct: 253 --IKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310

Query: 200 GIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHR 258
           G+K      A YV              AE L +  +  VPG+ F   G  ++R+S     
Sbjct: 311 GLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLSYATSE 368

Query: 259 ESILEASRRLEAL 271
           E++ +A  R   +
Sbjct: 369 ENLRKALERFARV 381

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score =  109 bits (275), Expect = 5e-28
 Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 19/233 (8%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
           T RT  +   +P NPTG    + +LE +   AR +   +I D  Y        PR +   
Sbjct: 150 TPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRL--R 207

Query: 103 PGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI 161
             A E    + S  K     TG R+GW V P+E +       +  +     T F+  +  
Sbjct: 208 EFAPERTFTVGSAGKRLE-ATGYRVGWIVGPKEFM--PRLAGMRQW-----TSFSAPTP- 258

Query: 162 AQAGGLACLSSEGLEA-VHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRK 220
            QAG    L     E    ++ + Y+    +L   L ++G++VY      ++ A  PG  
Sbjct: 259 LQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGWD 318

Query: 221 SWDVFAEILEKTHITTVPGSGF--GPGGEEYIRISGFGHRESILEASRRLEAL 271
           ++     ++E+  +  +P S F      ++  R +     E +  A  RL  +
Sbjct: 319 AF----RLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRV 367

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A* Length = 391

 Score =  109 bits (274), Expect = 6e-28
 Identities = 49/263 (18%), Positives = 80/263 (30%), Gaps = 42/263 (15%)

Query: 31  GPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA 88
                +  D  G       I    SPNNP G        E +V    ++ + +I D AY 
Sbjct: 141 SGMYKWEGDAWGFDKKGPYIELVTSPNNPDG-----TIRETVVNRPDDDEAKVIHDFAY- 194

Query: 89  AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN 148
            Y     P     I   ++  I + +FSK +G  G R+GW +V ++        V     
Sbjct: 195 -YWPHYTP-----ITRRQDHDIMLFTFSKITGHAGSRIGWALVKDKE-------VAKKMV 241

Query: 149 RIICTCFNGASNIAQAGGLACL---------SSEGLEAVHSVVDYYKENTKILIDTLASL 199
             I     G S  +Q      L          SE         +  K   + L + +   
Sbjct: 242 EYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKES 301

Query: 200 GIKVY-----------GGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEE 248
                           G     Y    + G K        L +  + +  G   G   ++
Sbjct: 302 DAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSRAGERCG-SDKK 360

Query: 249 YIRISGFGHRESILEASRRLEAL 271
           ++R+S     +       RL  +
Sbjct: 361 HVRVSMLSREDVFNVFLERLANM 383

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Length = 427

 Score =  109 bits (274), Expect = 1e-27
 Identities = 51/259 (19%), Positives = 95/259 (36%), Gaps = 22/259 (8%)

Query: 27  YLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
                P  ++  DLK        +T  +   +P+NP G   ++  L++++  A      I
Sbjct: 168 LYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPI 227

Query: 82  IFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSG 140
           + D  Y   V   C    +  +       +     +K     G RLGW ++ +       
Sbjct: 228 LADEIYGDMVFSDCKYEPLATL-STDVPILSCGGLAKRWLVPGWRLGWILIHDRR--DIF 284

Query: 141 FPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL- 199
              I D    +     G   I Q    + L     E  H+ + + K N  +    LA++ 
Sbjct: 285 GNEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIP 344

Query: 200 GIKVY--GGINAPYVW-----AHFPGRKSWDVFAE-ILEKTHITTVPGSGFGPGGEEYIR 251
           G++     G  A Y+       HFP  ++   F E ++ +  +  +P + F      +IR
Sbjct: 345 GLRPVRPSG--AMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCF--EYPNFIR 400

Query: 252 ISGFGHRESILEASRRLEA 270
           +        +LEA  R++ 
Sbjct: 401 VVITVPEVMMLEACSRIQE 419

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score =  108 bits (272), Expect = 2e-27
 Identities = 47/253 (18%), Positives = 86/253 (33%), Gaps = 31/253 (12%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYE 101
             +T +I   +P+NP G    + +LE +    +    + + D  Y   V +      I  
Sbjct: 180 NEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICT 239

Query: 102 IPGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160
           +PG  E  I I S  K FS  TG ++GW   PE LL      +++               
Sbjct: 240 LPGMWERTITIGSAGKTFS-LTGWKIGWAYGPEALL--KNLQMVHQN---CVYTCATPIQ 293

Query: 161 IAQAGGLACLSS---EGLEAVHSVVDYYKENTKILIDTLASLGIKV------------YG 205
            A A G               +S+          +   LA +G+              + 
Sbjct: 294 EAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWS 353

Query: 206 GINAPYVWAHFPGRKSWDVFAE-ILEKTHITTVPGSGFG-----PGGEEYIRISGFGHRE 259
            +++          +    F + + +   +  +P S F        GE+++R   F  ++
Sbjct: 354 SLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYC-FFKKD 412

Query: 260 SIL-EASRRLEAL 271
             L +A+  L   
Sbjct: 413 ENLQKAAEILRKW 425

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium} Length = 417

 Score =  107 bits (270), Expect = 3e-27
 Identities = 46/249 (18%), Positives = 83/249 (33%), Gaps = 31/249 (12%)

Query: 40  LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSI 99
           L     T +I    P NPTG+  T  +L +L   A  +   ++ D+AY            
Sbjct: 175 LHIGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEA 234

Query: 100 YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS 159
              P      I   S SK  G  G R G  +  ++ +       I + N II        
Sbjct: 235 R--PLWNPNIILCMSLSKL-GLPGSRCGIIIANDKTI-----TAIANMNGIISLA---PG 283

Query: 160 NIAQAGGLACLSSEGLEAVHS--VVDYYKENTKILIDTLAS----LGIKVY---GGINAP 210
            +  A     +    L  +    +  +Y +  +  I  +          ++   G I   
Sbjct: 284 GMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAI--- 340

Query: 211 YVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPG-------GEEYIRISGFGHRESIL 262
           ++W  F     + ++  + L+   +  VPG  F PG         + +R++     + I 
Sbjct: 341 FLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIE 400

Query: 263 EASRRLEAL 271
              + L   
Sbjct: 401 AGVKILAEE 409

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score =  106 bits (266), Expect = 1e-26
 Identities = 53/254 (20%), Positives = 89/254 (35%), Gaps = 32/254 (12%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPR-SIYE 101
           TSRT  +   +PNNP G   ++ +LE +    + +  + I D  Y   V DG    SI  
Sbjct: 172 TSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIAS 231

Query: 102 IPGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160
           +PG  E  + I S  K FS  TG ++GW + P+ ++       ++             S 
Sbjct: 232 LPGMWERTLTIGSAGKTFS-ATGWKVGWVLGPDHIM--KHLRTVHQN---SVFHCPTQSQ 285

Query: 161 IAQAGGLA---CLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV------------YG 205
            A A        L  +            +     +I +L S+G+K               
Sbjct: 286 AAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDIS 345

Query: 206 GINAPYVWAHFPGRKSWDV-FAE-ILEKTHITTVPGSGF-----GPGGEEYIRISGFGHR 258
                         + +D  F + +++   +  +P S F         + YIR   F   
Sbjct: 346 DFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFC-FVKD 404

Query: 259 ESIL-EASRRLEAL 271
           E+ L     +L   
Sbjct: 405 EATLQAMDEKLRKW 418

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score =  104 bits (261), Expect = 5e-26
 Identities = 52/252 (20%), Positives = 90/252 (35%), Gaps = 32/252 (12%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYE 101
           +S+T  I   +P+NP G   T+ +L+ + +    + ++ I D  Y   V  G     I  
Sbjct: 165 SSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIAT 224

Query: 102 IPGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160
           +PG  E  I I S  K FS  TG +LGW++ P  L+       +                
Sbjct: 225 LPGMWERTITIGSAGKTFS-VTGWKLGWSIGPAHLI--KHLQTVQQN---SFYTCATPLQ 278

Query: 161 IAQAGGLACLSSEGLEA---VHSVVDYYKENTKILIDTLASLGIKV------------YG 205
            A A           +     +S+    +     ++  L S+G+K               
Sbjct: 279 AALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVS 338

Query: 206 GINAPYVWAHFPGRKSWDVFAE-ILEKTHITTVPGSGFG-----PGGEEYIRISGFGHRE 259
            + A     +      +  F + + +   +T +P S F      P  E+ +R   F  ++
Sbjct: 339 SLGADLSDMNSDEPYDYK-FVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFC-FIKKD 396

Query: 260 SIL-EASRRLEA 270
           S L  A     A
Sbjct: 397 STLDAAEEIFRA 408

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1 Length = 388

 Score =  103 bits (259), Expect = 1e-25
 Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 21/255 (8%)

Query: 27  YLECGPGNNFFP---DLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
            L       F      ++   T +T ++ F +P+NPTG   T +++  + + A   G  +
Sbjct: 140 ILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWV 199

Query: 82  IFDSAYAAYVTDGCP-RSIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS 139
           + D  Y   + D     SI    P A E ++  S F+K    TG R+G+   P  L    
Sbjct: 200 LSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPL---- 255

Query: 140 GFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL 199
               +    +I     +     AQ G +A   +   + V  ++  + E  + ++D L ++
Sbjct: 256 ----VKAATKIQGHSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDALNAM 310

Query: 200 -GIKVYGGINAPYVWAHFPG--RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG 256
            G++      A Y++       R S D  +E+L++  + TVPG+ FG      IR+S   
Sbjct: 311 PGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADD--CIRLSYAT 368

Query: 257 HRESILEASRRLEAL 271
             ++I     RLE  
Sbjct: 369 DLDTIKRGMERLEKF 383

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score =  102 bits (257), Expect = 3e-25
 Identities = 51/255 (20%), Positives = 85/255 (33%), Gaps = 36/255 (14%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYE 101
           TS+T  +   +P+NP G   T+ +L  L      +  +II D  Y          R    
Sbjct: 199 TSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATL 258

Query: 102 IPGAREVAIEISSFSK-FSGFTGVRLGWTV-VPEELLFSSGFPVINDFNRIICTCFNGAS 159
            P   ++ + + S  K F+  TG R+GW + +  ELL  S     +        CF   S
Sbjct: 259 SPEIGQLTLTVGSAGKSFA-ATGWRIGWVLSLNAELL--SYAAKAHTRI-----CFASPS 310

Query: 160 NIAQAGGLACLSSEGLEA-VHSVVDYYKENTKILIDTLASLGIKVY---G---------- 205
              Q      ++          +   Y    KI       LG+      G          
Sbjct: 311 -PLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSK 369

Query: 206 -GINAPYVWAHFPGRKSWDV-FAE-ILEKTHITTVPGSGFG-----PGGEEYIRISGFGH 257
             I   Y +      K  D   +  ++ +  +  +P + F         E  +R +    
Sbjct: 370 VKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFA-VCK 428

Query: 258 RESIL-EASRRLEAL 271
            ++ L  A  RL+ L
Sbjct: 429 DDAYLENAVERLKLL 443

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A* Length = 435

 Score =  102 bits (256), Expect = 4e-25
 Identities = 56/281 (19%), Positives = 96/281 (34%), Gaps = 52/281 (18%)

Query: 27  YLECGPGNNF-----------FPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR 75
            + C   N F               K   R   +   +P+NP G   T+N+L  L+ F  
Sbjct: 162 PIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVE 221

Query: 76  NNGSIIIFDSAYAAYVTDGCP-RSIYEI---------PGAREVAIEISSFSKFSGFTGVR 125
           + G  +I D  Y+          S+ E+             +    + S SK  G  G R
Sbjct: 222 DKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFR 281

Query: 126 LGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYY 185
           +G     +++       V+    ++  + F   S+  Q      L S  L       +Y 
Sbjct: 282 VGAIYSNDDM-------VVAAATKM--SSFGLVSSQTQH-----LLSAMLSDKKLTKNYI 327

Query: 186 KENTK-------ILIDTLASLGIKVYGGINAPYVWA---HFPGRKSWD---VFAE-ILEK 231
            EN K        L+  L   GI    G    + W    H     +++      + I+ +
Sbjct: 328 AENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYE 387

Query: 232 THITTVPGSGFGPGGEEYIRISGFGH--RESILEASRRLEA 270
            H+   PGS        + R+  F +    ++  A +RL+A
Sbjct: 388 VHLNISPGSSCHCTEPGWFRVC-FANLPERTLDLAMQRLKA 427

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Length = 350

 Score =  101 bits (253), Expect = 4e-25
 Identities = 38/215 (17%), Positives = 82/215 (38%), Gaps = 24/215 (11%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
            S  D  + C+PNNP G    + ++ +L+    +  +  + D +Y ++ T+     +   
Sbjct: 127 FSNMDFCWLCNPNNPDGRLLQRTEILRLLN--DHPDTTFVLDQSYVSFTTE----EVIRP 180

Query: 103 PGARE---VAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS 159
              +    + + + SFS   G  G+R+G+ V  ++         +        T +   +
Sbjct: 181 ADIKGRKNLVM-VYSFSHAYGIPGLRIGYIVANKDF--------MKRVAAFS-TPWA-VN 229

Query: 160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG 218
            +A       L           +  ++ NT   I  L  L G++V+      +       
Sbjct: 230 ALAIEAAKFILIHP--AQFTLPIRKWQRNTVDFITALNRLDGVEVHPS-GTTFFLLRLKK 286

Query: 219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS 253
             + ++   +LE+ ++     S F    E Y+RI+
Sbjct: 287 GTAAELKKYMLEEYNMLIRDASNFRGLDESYVRIT 321

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Length = 364

 Score =  101 bits (253), Expect = 5e-25
 Identities = 43/236 (18%), Positives = 84/236 (35%), Gaps = 21/236 (8%)

Query: 23  CNIEYLECGPGNNFFPDL----KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78
           C I        + +          T   D +F C+PNNPTG    +  L+ + +  ++  
Sbjct: 120 CEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLN 179

Query: 79  SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFS 138
             +I D A+  ++       I  +     + + + S +KF    G+RLG+ V  ++    
Sbjct: 180 INLILDEAFIDFIPHE-TGFIPALKDNPHIWV-LRSLTKFYAIPGLRLGYLVNSDDAA-- 235

Query: 139 SGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS 198
                +    R     ++  + +A   G   L         +   + +E        L  
Sbjct: 236 -----MARMRR-QQMPWS-VNALAALAGEVALQDS--AWQQATWHWLREEGARFYQALCQ 286

Query: 199 L-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS 253
           L  + VY G  A Y+      R+  D+   +L +  I     + +      Y R++
Sbjct: 287 LPLLTVYPG-RANYLLLRCE-REDIDLQRRLLTQ-RILIRSCANYPGLDSRYYRVA 339

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A* Length = 428

 Score =  100 bits (251), Expect = 2e-24
 Identities = 51/249 (20%), Positives = 88/249 (35%), Gaps = 29/249 (11%)

Query: 41  KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSI 99
           K   +   +   +P+NP G    ++ L+ ++ F   +   ++ D  YAA V D     SI
Sbjct: 184 KSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSI 243

Query: 100 YEIPGAREVAIE-------ISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC 152
            EI   +E+          + S SK  G  G R+G        ++S    V+N   ++  
Sbjct: 244 AEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGI-------IYSFNDDVVNCARKM-- 294

Query: 153 TCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP 210
           + F   S   Q    A LS E      +        +  K   + L  +GIK        
Sbjct: 295 SSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGL 354

Query: 211 YVWA---HFPGRKSWD---VFAE-ILEKTHITTVPGSGFGPGGEEYIRISGFGH--RESI 261
           + W          ++D        I+    +   PGS F      + R+  F +    ++
Sbjct: 355 FCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVC-FANMDDGTV 413

Query: 262 LEASRRLEA 270
             A  R+  
Sbjct: 414 DIALARIRR 422

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score = 96.8 bits (242), Expect = 1e-23
 Identities = 40/239 (16%), Positives = 84/239 (35%), Gaps = 20/239 (8%)

Query: 21  KYCNIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76
           K   +  +      N   D +         D +   +PNNP G    + +   +++ A  
Sbjct: 116 KKHGVSVVFSYLDENMCIDYEDIISKIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEE 175

Query: 77  NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
               II D A+  +  D     + EI     + I I + +KF    G+R G+ +   + +
Sbjct: 176 KKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFI-IRAMTKFFAMPGIRFGYGITNNKEI 234

Query: 137 FSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL 196
                             +N  +  A+   + CL       +   + + K+  K  I+ L
Sbjct: 235 -------AAKIKAKQ-NPWN-INCFAEMAAINCLKDT--NYIEESLLWIKKERKRFIEEL 283

Query: 197 ASLGI--KVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS 253
             +G   +V+   +A +V           ++  +L++  I       F    + ++R +
Sbjct: 284 NKIGFIKRVFSP-HANFVLCRLENISGEKLYDSLLKE-DIVIRRCCNFIGLDDSFVRFA 340

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Length = 360

 Score = 94.9 bits (237), Expect = 8e-23
 Identities = 44/215 (20%), Positives = 76/215 (35%), Gaps = 31/215 (14%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
                + F  +PN P G +     LE + E AR    +++ D  YA +        +   
Sbjct: 147 RYEGKVFFLTTPNAPLGPSFP---LEYIDELARRCAGMLVLDETYAEFAESNALELVRRH 203

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162
                V +   + SK     G+R+G  +   E+        I   ++ I   +N    +A
Sbjct: 204 E---NVVV-TRTLSKSYSLAGMRIGLAIARPEV--------IAALDK-IRDHYN-LDRLA 249

Query: 163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP----YVWAHFPG 218
           QA  +A L  +    +       +E  +     L S+G  V      P    Y++A  P 
Sbjct: 250 QAACVAALRDQ--AYLSECCRRIRETREWFTTELRSIGYDVI-----PSQGNYLFATPPD 302

Query: 219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS 253
           R    V+  +  +  +     S   P     +RIS
Sbjct: 303 RDGKRVYDGLYAR-KVLVRHFS--DPLLAHGMRIS 334

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp} Length = 365

 Score = 94.5 bits (236), Expect = 1e-22
 Identities = 40/218 (18%), Positives = 86/218 (39%), Gaps = 29/218 (13%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIY-- 100
                +IF C PNNP G     ++  + ++    +  +++ D+AY  + +    +     
Sbjct: 151 KDEIKLIFLCLPNNPLGECLDASEATEFIKGVNED-CLVVIDAAYNEFASFKDSKKHLEP 209

Query: 101 -EIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS 159
            E+    +  + + +FSK  G  G+R+G+ +            +I+ F + +   FN  S
Sbjct: 210 CELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANAN--------IISAFYK-LRAPFN-VS 259

Query: 160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP----YVWAH 215
           N+A    +A +  +  E     ++      ++  +      IK+           ++   
Sbjct: 260 NLALKAAVAAMDDD--EFTEKTLENNFSQMELYKEFAKKHNIKII-----DSYTNFITYF 312

Query: 216 FPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS 253
           F  + S D+  ++L+K  I       +G      IRI+
Sbjct: 313 FDEKNSTDLSEKLLKKGIIIR-NLKSYGL---NAIRIT 346

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei} Length = 337

 Score = 92.6 bits (231), Expect = 5e-22
 Identities = 50/240 (20%), Positives = 80/240 (33%), Gaps = 38/240 (15%)

Query: 21  KYCNIEYLECGPGNNFFPDLKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77
               + + E G  ++   D       SR D +   +P+NPTG A +  +L+QL + A   
Sbjct: 108 AVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQRA--- 164

Query: 78  GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF 137
              ++ D  Y  Y +         +       +   SFSK  G  G+RLG    P EL  
Sbjct: 165 -GKLLIDETYVDYSSF----RARGLAYGENELV-FRSFSKSYGLAGLRLGALFGPSEL-- 216

Query: 138 SSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA 197
                 I    R      N    +      A L ++   A  + +       + + D L 
Sbjct: 217 ------IAAMKR-KQWFCN-VGTLDLHALEAALDND--RAREAHIAKTLAQRRRVADALR 266

Query: 198 SLGIKVYGGINAP----YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS 253
            LG +V           +V       +       + E+  I          G   +IRIS
Sbjct: 267 GLGYRVA-----SSEANFVLVENAAGE--RTLRFLRER-GIQVKDAG--QFGLHHHIRIS 316

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Length = 354

 Score = 92.6 bits (231), Expect = 6e-22
 Identities = 41/218 (18%), Positives = 73/218 (33%), Gaps = 30/218 (13%)

Query: 43  TSRTD--IIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD-GCPRSI 99
            + +   I++  +PNNPTG     + +E  +     N ++ I D AYA +V D       
Sbjct: 137 AAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPAN-TMFIVDEAYAEFVNDPRFRSIS 195

Query: 100 YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS 159
             I    E  I + +FSK     G+R+G+ V    +        I    R         +
Sbjct: 196 PMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTV--------IALMGR-YVAGEK-IN 245

Query: 160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP----YVWAH 215
                  LA ++      +         + +IL+  L  L +        P    +V+  
Sbjct: 246 FSGVDAALASMNDS--AFITYSKKSNDVSRQILLKALEDLKLPYL-----PSEGNFVFHQ 298

Query: 216 FPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS 253
                  D    + +   +         P  + + RIS
Sbjct: 299 L-VVPLKDYQTHMADA-GVLIGRA---FPPADNWCRIS 331

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} Length = 363

 Score = 89.9 bits (224), Expect = 5e-21
 Identities = 42/212 (19%), Positives = 86/212 (40%), Gaps = 20/212 (9%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
             +T I++ C+PNNPTG+      ++  ++   ++  +++ D AY  YVT    +    +
Sbjct: 153 DEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSD-VLVVLDEAYIEYVTPQPEKHEKLV 211

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162
              + + I   +FSK  G    R+G+ +  +E+        I   N  +   FN  ++I 
Sbjct: 212 RTYKNLII-TRTFSKIYGLASARVGYGIADKEI--------IRQLNI-VRPPFN-TTSIG 260

Query: 163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKS 221
           Q   +  +  +    +           K           +K+Y   N  +V     G ++
Sbjct: 261 QKLAIEAIKDQ--AFIGECRTSNANGIKQYEAFAKRFEKVKLYPA-NGNFVLIDL-GIEA 316

Query: 222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRIS 253
             +F+ + +  +IT   G+    G    +RI+
Sbjct: 317 GTIFSYLEKNGYITR-SGAAL--GFPTAVRIT 345

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm} Length = 533

 Score = 91.0 bits (226), Expect = 6e-21
 Identities = 48/266 (18%), Positives = 80/266 (30%), Gaps = 60/266 (22%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF-DSAYAAYVTDGCPRSIYE 101
                 +   +P NPT      N L  + +    N  ++I  D  Y A+V +   +SIY 
Sbjct: 242 DPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF--KSIYS 299

Query: 102 IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF------------------------ 137
           +       + + S+SK  G TG RLG   + E+ +F                        
Sbjct: 300 V--VPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVL 357

Query: 138 -----SSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEA---------VHSVVD 183
                     +  D   I      G S   Q        +  L +         +     
Sbjct: 358 DPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARK 417

Query: 184 YYKENTKILIDTLASLGIKV------YGGINAPYVWAHFPGRK----------SWDVFAE 227
              E    L D + +   +       Y  I+   +     G++            D   +
Sbjct: 418 LVSERYDQLHDAMQAPKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLK 477

Query: 228 ILEKTHITTVPGSGFGPGGEEYIRIS 253
           + EK  +  V G GFG      +R+S
Sbjct: 478 LAEKNGVVLVDGVGFG-AKPGELRVS 502

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Length = 500

 Score = 90.6 bits (225), Expect = 6e-21
 Identities = 55/294 (18%), Positives = 88/294 (29%), Gaps = 61/294 (20%)

Query: 25  IEYLECGPGNNFFPDL-----------KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEF 73
           + Y        +  +                    +   +P NPTG    +     +V+F
Sbjct: 207 VPY-YLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKF 265

Query: 74  ARNNGSIIIFDSAYAAYV-TDGCP----RSIYEIPGAREVAIEISSFSKFS----GFTGV 124
            +N G +++ D  Y   +  D       + I    G  E  + + S+   S    G  G 
Sbjct: 266 CKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGK 325

Query: 125 RLGWTVVPEELLFSSGFPVINDFNRI--ICTCFNGASNIAQAGGLACLSS------EGLE 176
           R G+  +          PV     +I  +  C N    I  +  +    +          
Sbjct: 326 RGGYFEITGFSA-----PVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKA 380

Query: 177 AVHSVVDYYKENTKILIDTLASL-GI---KVYGGINAPYVWAHFP--------------- 217
               ++       K L      L GI   +  G   A YV   FP               
Sbjct: 381 EKDGILASLARRAKALEHAFNKLEGITCNEAEG---AMYV---FPQICLPQKAIEAAKAA 434

Query: 218 GRKSWDVFAE-ILEKTHITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLE 269
            +     +A  +LE T I  VPGSGFG   G  + R +     + I     R  
Sbjct: 435 NKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFT 488

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A* Length = 356

 Score = 89.2 bits (222), Expect = 8e-21
 Identities = 60/255 (23%), Positives = 98/255 (38%), Gaps = 29/255 (11%)

Query: 23  CNIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG 78
             +E       +N+  DL+G         +++ CSPNNPTG          L+E  R   
Sbjct: 120 IGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKA 179

Query: 79  SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFS 138
            I++ D AY  +           +     +AI + + SK     G+R G+T+  EE    
Sbjct: 180 -IVVADEAYIEFCPQ--ASLAGWLAEYPHLAI-LRTLSKAFALAGLRCGFTLANEE---- 231

Query: 139 SGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS 198
               VIN   ++I   +   S          LS +G+ A+   V       + LI  L  
Sbjct: 232 ----VINLLMKVIAP-YP-LSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKE 285

Query: 199 LGI--KVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG 256
           +    +V+      Y+ A F       VF  + ++  I  +      P     +RI+  G
Sbjct: 286 IPCVEQVFDS-ETNYILARFKASS--AVFKSLWDQGII--LRDQNKQPSLSGCLRIT-VG 339

Query: 257 HRESILEASRRLEAL 271
            RE   E+ R ++AL
Sbjct: 340 TRE---ESQRVIDAL 351

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Length = 498

 Score = 88.3 bits (219), Expect = 4e-20
 Identities = 50/300 (16%), Positives = 98/300 (32%), Gaps = 73/300 (24%)

Query: 25  IEYLECGPGNNFFPDL-----KGTSRTD-----IIFFCSPNNPTGHAATQNQLEQLVEFA 74
           + Y      N +  ++           D     ++   +P NPTG   ++  +E ++ FA
Sbjct: 206 VNY-YLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFA 264

Query: 75  RNNGSIIIFDSAYAAYVTDG------CPRSIYEIPGAREVAIEISSFSKFS----GFTGV 124
                 ++ D  Y   V           + +YE+       +E++SF   S    G  G 
Sbjct: 265 WEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGY 324

Query: 125 RLGWTVVPEELLFSSGFP--VINDFNRI--ICTCFNGASNIAQAGGLACLSSEGLEAVHS 180
           R G+  V             +     ++  +  C      ++    +  + +  +    S
Sbjct: 325 RGGYMEV-------INLHPEIKGQLVKLLSVRLC----PPVSGQAAMDIVVNPPVAGEES 373

Query: 181 VVDY----------YKENTKILIDTLASL-GI---KVYGGINAPYVWAHFP--------- 217
              +            +  K+  D    + GI    + G   A Y    FP         
Sbjct: 374 FEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQG---AMYA---FPRIFIPAKAV 427

Query: 218 ------GRKSWDVFA-EILEKTHITTVPGSGFG-PGGEEYIRISGFGHRESILEASRRLE 269
                        +  ++LE+T I  VPGSGFG   G  + R++     E +    ++++
Sbjct: 428 EAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVK 487

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A* Length = 335

 Score = 86.4 bits (215), Expect = 8e-20
 Identities = 40/219 (18%), Positives = 84/219 (38%), Gaps = 43/219 (19%)

Query: 24  NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF 83
             ++LE     +           D++F  +PNNPTGH   + ++E++++     G+ +  
Sbjct: 117 GAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILK----TGAFVAL 172

Query: 84  DSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPV 143
           D AY  +  +     +  +     +A+ I +FSK       R+G+ V  E+         
Sbjct: 173 DEAYYEFHGESY---VDFLKKYENLAV-IRTFSKAFSLAAQRVGYVVASEKF-------- 220

Query: 144 INDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT-------L 196
           I+ +NR +   FN  S ++Q      L            + ++E TK +++        L
Sbjct: 221 IDAYNR-VRLPFN-VSYVSQMFAKVALDHR---------EIFEERTKFIVEERERMKSAL 269

Query: 197 ASLGIKVYGGINAP----YVWAHFPGRKSWDVFAEILEK 231
             +G ++           +V+      +   +   +  K
Sbjct: 270 REMGYRIT-----DSRGNFVFVFMEKEEKERLLEHLRTK 303

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A* Length = 546

 Score = 86.1 bits (213), Expect = 3e-19
 Identities = 51/265 (19%), Positives = 82/265 (30%), Gaps = 62/265 (23%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS--IIIFDSAYAAYVTDGCPRSIY 100
                I F  +P+NP      Q  LE++      +    +I+ D  Y  +  D    S++
Sbjct: 243 DPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQ--SLF 300

Query: 101 EIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF----------------------- 137
            I    E  + + SFSK+ G TG RLG     ++ +F                       
Sbjct: 301 AI--CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLL 358

Query: 138 ------SSGFPVINDFNRIICTCFNGASNIAQA----GGLACLSSEGLEAVHSVVDYYKE 187
                      ++ D   +      G S   Q       L  L  E  E  H++    + 
Sbjct: 359 PDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRR 418

Query: 188 NTKILIDTL-------------------ASLGIKVYGGINAPYVWAHFPGRKSWDVFAEI 228
               L   L                     +  K+YG   + +         + D+   I
Sbjct: 419 RETTLYRELGMPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQS---STGDMLFRI 475

Query: 229 LEKTHITTVPGSGFGPGGEEYIRIS 253
            ++T I  +PG GFG       R S
Sbjct: 476 ADETGIVLLPGRGFG-SNRPSGRAS 499

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} Length = 367

 Score = 84.9 bits (211), Expect = 4e-19
 Identities = 40/244 (16%), Positives = 89/244 (36%), Gaps = 38/244 (15%)

Query: 23  CNIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA-- 74
             +E++      +F  D           +  I++   PNNPTG+      +E +V  A  
Sbjct: 129 AGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQG 188

Query: 75  RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE 134
               S+++ D AY  +  +     +  +     + + + + SK  G  G+RLG+     +
Sbjct: 189 SVCRSLVVVDEAYQPFAQES---WMSRLTDFGNLLV-MRTVSKL-GLAGIRLGYVAGDPQ 243

Query: 135 LLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194
                    +   +++    +N  + + +A  L  L  E +  +       +     + +
Sbjct: 244 --------WLEQLDKVR-PPYN-VNVLTEATALFAL--EHVAVLDEQAAQLRAERSRVAE 291

Query: 195 TLASL-GIKVYGGINAP----YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEY 249
            +A+  G+ V+     P    ++ A  P       F  +L +  +     S   P     
Sbjct: 292 GMAAHGGVTVF-----PSAANFLLARVPDAA--QTFDRLLAR-KVLIKNVSKMHPLLANC 343

Query: 250 IRIS 253
           +R++
Sbjct: 344 LRVT 347

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Length = 369

 Score = 83.4 bits (207), Expect = 1e-18
 Identities = 45/246 (18%), Positives = 80/246 (32%), Gaps = 49/246 (19%)

Query: 23  CNIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76
            + E++    G +F  D+          + DI+F  +PNNPTG   +   L+ +      
Sbjct: 136 THTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTS---LDDVERIINV 192

Query: 77  NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
              I+I D AYA +     P +   +       +   + SK   F G RLG+ V      
Sbjct: 193 APGIVIVDEAYAEFSPS--PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPA-- 248

Query: 137 FSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL 196
                  I+     +   ++  S ++QA  +  L           V+        +   L
Sbjct: 249 ------FIDAVML-VRLPYH-LSALSQAAAIVAL--RHSADTLGTVEKLSVERVRVAARL 298

Query: 197 ASLGIKVYGGINAP----YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFG-----PGGE 247
             LG  V      P    +V+           +   L++           G      G  
Sbjct: 299 EELGYAVV-----PSESNFVFFGDFSD-QHAAWQAFLDR-----------GVLIRDVGIA 341

Query: 248 EYIRIS 253
            ++R +
Sbjct: 342 GHLRTT 347

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis} Length = 407

 Score = 83.8 bits (208), Expect = 1e-18
 Identities = 51/241 (21%), Positives = 84/241 (34%), Gaps = 41/241 (17%)

Query: 49  IFFCSPN--NPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYEIPGA 105
           + +  P   NP G   +  + + L+E A     +II D+AY     +G     +  +   
Sbjct: 177 LIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNE 236

Query: 106 REVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI-----ICTCFNGAS 159
             V I   + SK     TG R+GW +   E        ++            C       
Sbjct: 237 GRV-IVAGTLSKVLG--TGFRIGWIIAEGE--------ILKKVLMQKQPIDFCA-----P 280

Query: 160 NIAQAGGLACLSSEGLEAVH--SVVDYYKENTKILIDTLASL--GIKVY---GGINAPYV 212
            I+Q   L  L     E  H    +  YKE   I++  L +     +      G+   +V
Sbjct: 281 AISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGM---FV 337

Query: 213 WAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEE--YIRISGFGH--RESILEASRR 267
               P G        E++E+  +  VPG  F         IR++ F    +E I    ++
Sbjct: 338 MFFLPEGADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLN-FSRPSKEEIPIGIKK 396

Query: 268 L 268
           L
Sbjct: 397 L 397

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score = 83.2 bits (206), Expect = 2e-18
 Identities = 30/227 (13%), Positives = 74/227 (32%), Gaps = 23/227 (10%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS-----IIIFDSAYAAYVTDG--- 94
                I+    PNNPTG+  T  ++  +VE  +   +     I + D AY     +    
Sbjct: 187 NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYT 246

Query: 95  --CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC 152
                ++  +     + I +   +K     G R+G+         +    +      +I 
Sbjct: 247 QSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKE-VLEAKVKGLIR 305

Query: 153 TCFNGASNIAQAGGLACLSS------EGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG 206
           +  +      Q+     L +      E  + + ++ + Y+   +++         + Y  
Sbjct: 306 SNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDF 365

Query: 207 INAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS 253
            +  ++           +   +++K  I  +  +         IRI+
Sbjct: 366 NSGYFMAIKVHDVDPEALRKHLIDKYSIGVIALNATD------IRIA 406

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A* Length = 448

 Score = 76.9 bits (190), Expect = 3e-16
 Identities = 50/241 (20%), Positives = 91/241 (37%), Gaps = 42/241 (17%)

Query: 49  IFFCSPN--NPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGA 105
           + +  P   NP G    +++ + L+E A     I++ D  Y      G   + I  +   
Sbjct: 219 VVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNE 278

Query: 106 REVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI-----ICTCFNGAS 159
             V I + +FSK  +   G R+GW V            +I           +CT     +
Sbjct: 279 GRV-IYLGTFSKILA--PGFRIGWMVGDPG--------IIRKMEIAKQSTDLCT-----N 322

Query: 160 NIAQAGGLACLSSEGLEA-VHSVVDYYKENTKILIDTLASL---GIKVY---GGINAPYV 212
              Q      +    LE  +  +  +YK     +++ L      G+K     GG+   ++
Sbjct: 323 VFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGM---FI 379

Query: 213 WAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEE--YIRISGFGH--RESILEASRR 267
           W   P G  S  +    ++K  +  VPG  F    +    +R++ F +   + I+E  +R
Sbjct: 380 WVTLPDGIDSKKMLERAIKK-GVAYVPGEAFYAHRDVKNTMRLN-FTYVDEDKIMEGIKR 437

Query: 268 L 268
           L
Sbjct: 438 L 438

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1 Length = 425

 Score = 76.5 bits (189), Expect = 4e-16
 Identities = 53/243 (21%), Positives = 92/243 (37%), Gaps = 44/243 (18%)

Query: 49  IFFCSPN--NPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYEIPGA 105
             +   N  NP G   +  + + LVE A      I+ D  Y A   +G     I++I G 
Sbjct: 190 FIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGP 249

Query: 106 REVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI-----ICTCFNGAS 159
             V + +++FSK  +   G+R+G     +          I    +      +C+      
Sbjct: 250 ERV-VLLNTFSKVLA--PGLRIGMVAGSK--------EFIRKIVQAKQSADLCS-----P 293

Query: 160 NIAQAGGLACLSSEGLEA-VHSVVDYYKENTKILIDTLA-----SLGIKVY---GGINAP 210
            I        L    L   +   ++ Y+    ++++ L        G+K     GG+   
Sbjct: 294 AITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGL--- 350

Query: 211 YVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEE--YIRISGFGH--RESILEAS 265
           ++W   P G  +W++F     K  +  VPG  F    E    +R+S F     E I+E  
Sbjct: 351 FIWLTLPEGFDTWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLS-FCLPPDEKIVEGI 408

Query: 266 RRL 268
           +RL
Sbjct: 409 KRL 411

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A* Length = 397

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 53/242 (21%), Positives = 91/242 (37%), Gaps = 42/242 (17%)

Query: 49  IFFCSPN--NPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYEI--P 103
             +  P+  NPTG        ++L++     G +++ D AY           S++E+   
Sbjct: 165 FLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELARE 224

Query: 104 GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI-----ICTCFNGA 158
                 I + SFSK     G+R+ + V   E         +    +      + T     
Sbjct: 225 AGYPGVIYLGSFSK-VLSPGLRVAFAVAHPE--------ALQKLVQAKQGADLHT----- 270

Query: 159 SNIAQAGGLACLSSEGLEA-VHSVVDYYKENTKILIDTLASL---GIKVY---GGINAPY 211
             + Q   +  L  EG    +  V   Y+E  + ++  L       ++     GG+   +
Sbjct: 271 PMLNQM-LVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGM---F 326

Query: 212 VWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEE--YIRISGFGH--RESILEASR 266
           VW   P G  +  +F   LE+ ++  VPG  F   G     +R+S +    RE I E  R
Sbjct: 327 VWMELPKGLSAEGLFRRALEE-NVAFVPGGPFFANGGGENTLRLS-YATLDREGIAEGVR 384

Query: 267 RL 268
           RL
Sbjct: 385 RL 386

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} Length = 377

 Score = 66.8 bits (164), Expect = 7e-13
 Identities = 52/246 (21%), Positives = 88/246 (35%), Gaps = 26/246 (10%)

Query: 37  FPDL--KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG 94
             D+     +    I  C+P NP G       L +L + A    + ++ D  +A  V DG
Sbjct: 140 LHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDG 199

Query: 95  CPRSIYEI-PGAREVAIEISSFSKFSGF--TGVRLGWTVVPEELLFSSGFPVINDFNRII 151
                  +   A  V I I++ SK   +   G++    +                + ++ 
Sbjct: 200 QHTVAAGVSDTAASVCITITAPSK--AWNIAGLKCAQIIFSNPSDA-------EHWQQLS 250

Query: 152 CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINA 209
               +GAS +      A     G + ++  V Y K N   L+  +     G K+     A
Sbjct: 251 PVIKDGASTLGLIAAEAAY-RYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPM-QA 308

Query: 210 PY-VWAHFPGRK---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEA 264
            Y +W  F  R            +EK  +    G+ FG  G  + R++ F   RE + EA
Sbjct: 309 TYLMWIDF--RDTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLN-FATSREVLEEA 365

Query: 265 SRRLEA 270
             R+  
Sbjct: 366 IDRMAK 371

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Length = 422

 Score = 66.6 bits (163), Expect = 9e-13
 Identities = 41/246 (16%), Positives = 74/246 (30%), Gaps = 41/246 (16%)

Query: 49  IFFCSPN--NPTGHAATQNQLEQLVEFA-RNNGSIIIFDSAYAA-YVTDGCPRSIYEIPG 104
             +  P   NPTG   ++    +L E +       I++D+AYA   ++D  P     I  
Sbjct: 181 GMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEF 240

Query: 105 AREV-----AIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI-----ICTC 154
           A+          +SS SK +   G  + +    +E         I  +        I   
Sbjct: 241 AQAAGNPNRFWFMSSTSKIT-HAGSGVSFFASSKE--------NIEWYASHANVRGIGP- 290

Query: 155 FNGASNIAQAGGLACLSS-EGLEA-VHSVVDYYKENTKILIDTLAS-LGIKVYGGINAP- 210
               + + Q           GL+A +           + +++ L S L         +P 
Sbjct: 291 ----NKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPT 346

Query: 211 ---YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEE---YIRISGFGH--RESIL 262
              ++        +  V     E     T  GS F    +     IR++         + 
Sbjct: 347 GGYFISVDVVPGTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLA-PSLPPVAELE 405

Query: 263 EASRRL 268
            A    
Sbjct: 406 VAMDGF 411

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A* Length = 425

 Score = 66.2 bits (162), Expect = 1e-12
 Identities = 52/240 (21%), Positives = 85/240 (35%), Gaps = 35/240 (14%)

Query: 49  IFFCSPN--NPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYEIPGA 105
             +  PN  NPTG++ T  + +++ E AR    +II D  Y     +     +   +   
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252

Query: 106 REVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ- 163
             V I   SFSK  S  +G+R+G+   P+         +I      I       S   Q 
Sbjct: 253 GRV-IRADSFSKIIS--SGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQL 301

Query: 164 --AGGLACLSSEGLEA-VHSVVDYYKENTKILIDTLAS-LGIKVY-----GGINAPYVWA 214
             +  L     EG  A V  V+D+Y      ++      L           G+   ++W 
Sbjct: 302 MISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGM---FLWI 358

Query: 215 HFP-GRKSWDVFAEILEKTHITTVPGSGF---GPGGEEYIRISGFGH--RESILEASRRL 268
                    ++  E   K  +  +PG+ F         Y+R S F     E +  A + L
Sbjct: 359 KVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRAS-FSSASPEQMDVAFQVL 417

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Length = 423

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 39/250 (15%), Positives = 75/250 (30%), Gaps = 48/250 (19%)

Query: 50  FFCSPN--NPTGHAATQNQLEQLVE-FARNNGSIIIFDSAYAA--YVTDGCPRSIYEIP- 103
               P   NP G   +  +  +L    A      I  D AY     V +     +  +  
Sbjct: 176 ILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVL 235

Query: 104 ----GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR-----IICTC 154
               G  + A   +S SK + F G  LG+    E+         I   ++      I   
Sbjct: 236 ARDAGYPDRAFVFASTSKIT-FAGAGLGFVASSEDN--------IRWLSKYLGAQSIGP- 285

Query: 155 FNGASNIAQAGGLACLSSE--GLEA-VHSVVDYYKENTKILIDTLASLGIKVYGGI---N 208
               + + QA  +  L+    GLE  +           + + + L +  +   G      
Sbjct: 286 ----NKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAE-LGEGGEYATWT 340

Query: 209 AP----YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEE----YIRISGFGH--R 258
            P    ++        +  V         ++  P     P G++     +R++       
Sbjct: 341 LPKGGYFISLDTAEPVADRVVKLAEAA-GVSLTPAGATYPAGQDPHNRNLRLA-PTRPPV 398

Query: 259 ESILEASRRL 268
           E +  A + +
Sbjct: 399 EEVRTAMQVV 408

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Length = 427

 Score = 61.7 bits (150), Expect = 4e-11
 Identities = 37/246 (15%), Positives = 71/246 (28%), Gaps = 43/246 (17%)

Query: 50  FFCSPN--NPTGHAATQNQLEQLVE-FARNNGSIIIFDSAYAA-YVTDGCPRSIYEIP-- 103
            +  P   NPTG   T++  ++L           +++D+AYA   +TD  P  I  +   
Sbjct: 184 MWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLG 243

Query: 104 ---GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI-----ICTCF 155
              G        +S SK +   G  + + +   E            +        I    
Sbjct: 244 EAAGNPNRFWAFTSTSKIT-LAGAGVSFFLTSAE--------NRKWYTGHAGIRGIGP-- 292

Query: 156 NGASNIAQAGGLACLSS-EGLEA-VHSVVDYYKENTKILIDTLAS-LGIKVYGGINAP-- 210
              + + Q          EG+ A +             +++ L S L          P  
Sbjct: 293 ---NKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAG 349

Query: 211 --YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEE----YIRISGFGH--RESIL 262
             ++        +  V     E   I         P  ++     +R++       E + 
Sbjct: 350 GYFISLDVVPGTASRVAELAKEA-GIALTGAGSSYPLRQDPENKNLRLA-PSLPPVEELE 407

Query: 263 EASRRL 268
            A   +
Sbjct: 408 VAMDGV 413

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans} Length = 421

 Score = 53.7 bits (130), Expect = 2e-08
 Identities = 45/239 (18%), Positives = 87/239 (36%), Gaps = 20/239 (8%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYE 101
            +   I   CSP+NP G     + L ++ E  + +G I++ D  +      G    S+  
Sbjct: 192 DNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNT 251

Query: 102 I-PGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS 159
           +    ++  I +SS +K F    G +  + ++  E L          F            
Sbjct: 252 LDASYKDFTIILSSATKTF-NIAGTKNSFAIIQNESLR-------RKFQYRQLANNQHEV 303

Query: 160 NI-AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPY-VWAHF 216
                    A     G   +  +    + N K++I  L +   IKV       Y VW  F
Sbjct: 304 PTVGMIATQAAF-QYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVM-EPEGTYLVWLDF 361

Query: 217 --PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272
                    +  ++  +  +    G+ FG  G+ + R++     + ++ EA  R+ ++F
Sbjct: 362 SAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLN-VATPKNTVQEALSRIISVF 419

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A* Length = 391

 Score = 52.9 bits (128), Expect = 3e-08
 Identities = 45/237 (18%), Positives = 91/237 (38%), Gaps = 21/237 (8%)

Query: 44  SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYEI 102
               +   C+P+NP G   T+++L++L +    +   II D  ++  +        +  I
Sbjct: 163 KDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASI 222

Query: 103 -PGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160
                +  I   + +K F    G++  + V+P+E  +          +          +N
Sbjct: 223 SKEFEKNTITCMAPTKTF-NIAGLQSSYVVLPDEKDY-------KLLDDAFTRIDIKRNN 274

Query: 161 I-AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPY-VWAHF 216
             +     A   + G   + S ++Y + N    I  +      +KV       Y +W  F
Sbjct: 275 CFSLVATEASY-NNGESWLESFLEYLESNIDFAIKYINENMPKLKVR-KPEGTYLLWVDF 332

Query: 217 --PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEA 270
              G    ++ + +++K  +    G+ FG GG  Y RI+     R  + EA  R++ 
Sbjct: 333 SALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRIN-LACPRSMLEEALIRIKN 388

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3 Length = 390

 Score = 52.5 bits (127), Expect = 4e-08
 Identities = 42/240 (17%), Positives = 85/240 (35%), Gaps = 29/240 (12%)

Query: 44  SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYEI 102
               I+  CSP NPTG   T ++LE + +    +G  +I D  +   V    P      +
Sbjct: 161 PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNV 220

Query: 103 PGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII--CTCFNGAS 159
             AR     ++S SK F     +   + ++             + +   +      +  S
Sbjct: 221 --ARGDWALLTSGSKSF-NIPALTGAYGIIENSSSR-------DAYLSALKGRDGLSSPS 270

Query: 160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAP---Y-VW 213
            +A    +A    +G   + ++  Y K+N   + D + +    +        P   Y  W
Sbjct: 271 VLALTAHIAAY-QQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQ----IPQSTYLAW 325

Query: 214 AHF--PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEA 270
                       +   ++E+  +  +PG  +G  G  ++R++  G  R  + +    L  
Sbjct: 326 LDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLN-AGCPRSKLEKGVAGLIN 384

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} Length = 391

 Score = 52.1 bits (126), Expect = 5e-08
 Identities = 48/238 (20%), Positives = 95/238 (39%), Gaps = 21/238 (8%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYE 101
           T    ++ FC+P+NP G+A ++ +++++ E    +  ++I D  +   V         + 
Sbjct: 158 TPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFT 217

Query: 102 I-PGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS 159
           +   A+   + + S SK F     +     ++P   L                    G  
Sbjct: 218 VDWDAKNWVVSLISPSKTF-NLAALHAACAIIPNPDLR-------ARAEESFFLAGIGEP 269

Query: 160 NI-AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPY-VWAH 215
           N+ A    +A    EG + +  +    ++N     + LA     +KV    NA Y  W  
Sbjct: 270 NLLAIPAAIAAY-EEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVL-DSNASYLAWVD 327

Query: 216 F--PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEA 270
               G  + D    + EKT +    G+G+   G E++RI+     +E +++  +RL+ 
Sbjct: 328 ISALGMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRIN-LACPKELVIDGMQRLKQ 384

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A* Length = 399

 Score = 51.8 bits (125), Expect = 7e-08
 Identities = 41/240 (17%), Positives = 76/240 (31%), Gaps = 21/240 (8%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYE 101
                 + FCSP+NP G    +++L+++ +    +  ++  D  +   +  G        
Sbjct: 162 DKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQS 221

Query: 102 I-PGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS 159
           I     +  I  ++ SK F    G+ +   ++    +          F +          
Sbjct: 222 IDEQLADKTITFTAPSKTF-NIAGMGMSNIIIKNPDIR-------ERFTKSRDATSGMPF 273

Query: 160 NI-AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPY-VWAH 215
                     C   E  + +   +    +N +I+ D        IK    I   Y  W  
Sbjct: 274 TTLGYKACEICY-KECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP-LIEGTYLQWID 331

Query: 216 F--PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272
           F         +   ++ K  I    G  FG GG  + RI+        I E+  RL    
Sbjct: 332 FRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERIN-LAAPSSVIQESLERLNKAL 390

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A* Length = 392

 Score = 51.7 bits (125), Expect = 7e-08
 Identities = 40/239 (16%), Positives = 85/239 (35%), Gaps = 21/239 (8%)

Query: 44  SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYEI 102
           +   +   C+P+NP G    +  LEQ+    + +  I++ D  +      G    S   +
Sbjct: 163 NDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTV 222

Query: 103 -PGAREVAIEISSFSK-FSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160
            P  ++ A+ +SS +K F    G +  + ++    L          F        +   +
Sbjct: 223 SPDFKDFALVLSSATKTF-NIAGTKNSYAIIENPTLC-------AQFKHQQLVNNHHEVS 274

Query: 161 I-AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS--LGIKVYGGINAPY-VWAHF 216
                         G   + ++    +EN +  ++  A     +KV       Y +W  F
Sbjct: 275 SLGYIATETAY-RYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVM-KPQGTYLIWLDF 332

Query: 217 --PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF 272
              G     +F  + ++  +    GS +G  GE + R++     +  + E  +R+    
Sbjct: 333 SDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLN-IAAPKSLVEEICKRIVCCL 390

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	272
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	100.0
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	100.0
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	100.0
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	100.0
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	100.0
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	100.0
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	100.0
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	100.0
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	100.0
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	100.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	100.0
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	100.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	100.0
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	100.0
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	100.0
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	100.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	100.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	99.98
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	99.97
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	99.97
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.97
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.96
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.96
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.96
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.96
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.95
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.95
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.95
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.95
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.95
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.95
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.95
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.94
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.94
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.94
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.94
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.94
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.94
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.94
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.94
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.94
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.94
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.94
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.94
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.94
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.94
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.94
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.94
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.94
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.94
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.94
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.94
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.93
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.93
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.93
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.93
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.93
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.93
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.93
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.92
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.92
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.92
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.92
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.91
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.91
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.91
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.91
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.91
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.91
1svv_A	359	Threonine aldolase; structural genomics, structura	99.9
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	99.9
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.9
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.9
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.9
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.9
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.9
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.9
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.9
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.9
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.9
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.9
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.9
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.89
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.89
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.89
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.89
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.89
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.89
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.89
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.89
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.89
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.89
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.88
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.88
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.88
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.88
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.88
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.88
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.88
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.88
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.87
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.87
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.87
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.87
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.87
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.87
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.86
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.86
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.86
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.86
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.86
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.86
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.86
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.86
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.86
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.86
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.86
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.86
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.86
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.86
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.86
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.86
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.86
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.85
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.85
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.85
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.85
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.85
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.85
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.85
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.85
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.84
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.84
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.84
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.83
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.83
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.82
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.82
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.82
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.81
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.8
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.8
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.79
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.79
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.78
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.77
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.76
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.76
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.76
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.76
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.62
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.74
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.74
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.74
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.74
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.74
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.73
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.73
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.72
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.71
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.71
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.7
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.69
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.69
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.68
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.66
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.63
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.56
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.56
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.56
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.48
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.47
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.47
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.12
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	98.95

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=100.00  E-value=1.1e-41  Score=298.09  Aligned_cols=267  Identities=67%  Similarity=1.176  Sum_probs=229.6

Q ss_pred             cccccccCccc-chHHhcccc-------------eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-------------NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-------------~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..|.+. |...+...|             +++++|++.++++..|+++.++++++++++||||||.+++.+++++
T Consensus       143 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~NPtG~~~~~~~l~~  222 (432)
T 3ei9_A          143 VTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQ  222 (432)
T ss_dssp             CCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhhCCCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence            66777777666 666655555             4789999877788888888889999999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024           70 LVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR  149 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~  149 (272)
                      |+++|+++|+++|+||+|.++.+++.+.++..+.+..+++++++|+||.+|++|+|+||++++++.+......+.+.+..
T Consensus       223 l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  302 (432)
T 3ei9_A          223 LVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNR  302 (432)
T ss_dssp             HHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHH
T ss_pred             HHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHH
Confidence            99999999999999999999888776667777665567889999999999999999999999988743333444566766


Q ss_pred             hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHH
Q 036024          150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEIL  229 (272)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll  229 (272)
                      .......+++.++|.++.+++.+...+++++++++++++++++.+.|+++|+++.++.+++|+|+.+++.+..+++..++
T Consensus       303 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  382 (432)
T 3ei9_A          303 IICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEIL  382 (432)
T ss_dssp             HHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEECSSSSEEEEECTTSCHHHHHHHHH
T ss_pred             HhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEEECCCCCHHHHHHHHH
Confidence            66666667899999999999875555788999999999999999999999999988778999999999767788889999


Q ss_pred             HhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024          230 EKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA  270 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~  270 (272)
                      +++||.+.||+.|++.+.+++|++++.+++++++++++|++
T Consensus       383 ~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~rl~~  423 (432)
T 3ei9_A          383 EKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQ  423 (432)
T ss_dssp             HHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHH
T ss_pred             HHCCEEEeCchHhCCCCCCEEEEEecCCHHHHHHHHHHHHH
Confidence            88899999999999877899999998899999999999986

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=8.6e-41  Score=293.85  Aligned_cols=269  Identities=57%  Similarity=1.055  Sum_probs=231.0

Q ss_pred             cccccccCccc-chHHhcccc-e----------eEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-N----------IEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLV   71 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~----------~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~   71 (272)
                      |.|++..|.+. |...+...| +          ++.+|+++++++.+|+++.+++++|++++||||||.+++.+++++|+
T Consensus       156 d~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~  235 (449)
T 3qgu_A          156 PTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELV  235 (449)
T ss_dssp             SCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred             CEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHH
Confidence            66777777766 778888888 7          99999998878888888778999999999999999999999999999


Q ss_pred             HHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024           72 EFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI  150 (272)
Q Consensus        72 ~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~  150 (272)
                      ++|+++|+++|+||+|.++.+++. +.++..+....+++++++|+||.+|++|+|+||++++++.+......+...+...
T Consensus       236 ~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~  315 (449)
T 3qgu_A          236 NFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRV  315 (449)
T ss_dssp             HHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHH
T ss_pred             HHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHH
Confidence            999999999999999999888753 4466666555678899999999999999999999999888543222333455555


Q ss_pred             hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHH
Q 036024          151 ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILE  230 (272)
Q Consensus       151 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~  230 (272)
                      ......+.+.++|.++.+++.+...+++++++++++++++++.+.|+++|+++..+++++++|+.+++.+..+++..|++
T Consensus       316 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  395 (449)
T 3qgu_A          316 MTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWVGFPGKPSWDVFAEILE  395 (449)
T ss_dssp             HHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEESSSSSEEEEECTTSCHHHHHHHHHH
T ss_pred             hhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCeeEEEEECCCCCHHHHHHHHHH
Confidence            66666678999999999999865557889999999999999999999999999988889999999986567788889998


Q ss_pred             hcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          231 KTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       231 ~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++||.+.||+.|++.+.+++|+++..+++++++++++|++++
T Consensus       396 ~~gI~v~pg~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~  437 (449)
T 3qgu_A          396 RCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKEAY  437 (449)
T ss_dssp             HHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             HCCEEEecchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            889999999999887789999998889999999999998763

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=100.00  E-value=1.5e-39  Score=280.52  Aligned_cols=256  Identities=23%  Similarity=0.327  Sum_probs=214.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...++..| +++.+|+++++++.+|++.     .++++++++++||||||.+++.+++++|+++|++
T Consensus       116 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~  195 (385)
T 1b5p_A          116 DEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVE  195 (385)
T ss_dssp             CEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            56777777666 888888889 9999999865567666332     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +|+++|+||+|.++.+++...++..+..  +++++++|+||.+|++|+|+||+++++++        ++.+.........
T Consensus       196 ~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~i~~~s~SK~~~~~G~RiG~~~~~~~~--------~~~l~~~~~~~~~  265 (385)
T 1b5p_A          196 HDFYLVSDEIYEHLLYEGEHFSPGRVAP--EHTLTVNGAAKAFAMTGWRIGYACGPKEV--------IKAMASVSRQSTT  265 (385)
T ss_dssp             TTCEEEEECTTTTCBSSSCCCCGGGTCT--TTEEEEEESTTTTTCGGGCCEEEECCHHH--------HHHHHHHHHTTTC
T ss_pred             cCCEEEEEccchhcccCCCCCCHHHcCC--CCEEEEEechhhcCCcccceEEEEeCHHH--------HHHHHHHHhhccC
Confidence            9999999999999887653345555533  77899999999999999999999998877        6666666655555


Q ss_pred             CcchHHHHHHHHhcccc--cHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC--CCChHHHHHHHHHhc
Q 036024          157 GASNIAQAGGLACLSSE--GLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKT  232 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~  232 (272)
                      +++.+.|.++.++++..  ..+++++.+++++++++.+.+.|+++|+++..+++++++|+.++  +.+..++...|+ ++
T Consensus       266 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~  344 (385)
T 1b5p_A          266 SPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL-EA  344 (385)
T ss_dssp             SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTEEEEECTTTCSSHHHHHHHHH-HT
T ss_pred             CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecCCCCCCHHHHHHHHH-HC
Confidence            68889999888888641  34678899999999999999999988998888888899999986  346677777777 56


Q ss_pred             CeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          233 HITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       233 gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ||.+.||+.|+.  ++++|+|+..+++++++++++|++++
T Consensus       345 gv~v~~g~~f~~--~~~iRis~~~~~~~i~~~l~~l~~~l  382 (385)
T 1b5p_A          345 GVAVVPGTDFAA--FGHVRLSYATSEENLRKALERFARVL  382 (385)
T ss_dssp             TEECEESGGGTC--TTEEEEECCSCHHHHHHHHHHGGGGC
T ss_pred             CeEEecccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            999999999975  67999999889999999999998864

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=100.00  E-value=6.9e-39  Score=277.75  Aligned_cols=265  Identities=40%  Similarity=0.690  Sum_probs=211.2

Q ss_pred             cccccccCccc-chHHhcccc-e-eEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-N-IEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI   80 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~-~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~   80 (272)
                      |.|++..|.+. +...++..| + ++++|+++++++..|+++.++++++++++||||||.+++.+++++|+++|+++|++
T Consensus       119 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~  198 (400)
T 3asa_A          119 QTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEIL  198 (400)
T ss_dssp             CEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCE
T ss_pred             CEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCE
Confidence            56777766655 777778888 8 99999987767877877667899999999999999999999999999999999999


Q ss_pred             EEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh-hhhhccCCc
Q 036024           81 IIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR-IICTCFNGA  158 (272)
Q Consensus        81 vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  158 (272)
                      +|+||+|.++.+++. +.++..+....+++++++|+||.+|++|+|+||++++++........ +..+.. .......+.
T Consensus       199 li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  277 (400)
T 3asa_A          199 ILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHF-VIQDWERFLSTTFNGA  277 (400)
T ss_dssp             EEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCB-HHHHHHHHHHHHCCCC
T ss_pred             EEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhh-HHHHHHHHhccCccCC
Confidence            999999998877653 34555554335678999999999999999999999988773111000 122222 222233458


Q ss_pred             chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEee-cC-CCChHHHHHHHHHhcCeEe
Q 036024          159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAH-FP-GRKSWDVFAEILEKTHITT  236 (272)
Q Consensus       159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~-l~-~~~~~~~~~~ll~~~gi~v  236 (272)
                      +.++|.++.+++...   ++++.+++++++++++.+.|++.|+++.++.+++++|+. ++ +.+..++...+++++||.+
T Consensus       278 ~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v  354 (400)
T 3asa_A          278 SIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLATGFEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYHIAI  354 (400)
T ss_dssp             CHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHTTCEEEECSSSSEEEEECCCTTCCTTTHHHHHHHHHSEEC
T ss_pred             ChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCceEEEEeccCCCCCHHHHHHHHHHhCCEEE
Confidence            889999888888754   567888999999999999999989999887789999999 77 3455577888888789999


Q ss_pred             eCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       237 ~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .||+.|++.+.+++|+++..+++++++++++|++++
T Consensus       355 ~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~  390 (400)
T 3asa_A          355 TPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAP  390 (400)
T ss_dssp             EEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC--
T ss_pred             eChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHHH
Confidence            999999766678999998789999999999998764

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=1.4e-38  Score=276.30  Aligned_cols=259  Identities=25%  Similarity=0.345  Sum_probs=217.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|.++ +++.+|++.+     ++++++++++|+||||.+++.+++++|+++|++
T Consensus       134 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~  212 (404)
T 2o1b_A          134 DYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKG  212 (404)
T ss_dssp             CEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTT
T ss_pred             CEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHH
Confidence            56777666555 878888888 999999987 4777776654     468999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +|+++|+||+|.++.+++.+.++..+.+..+++++++|+||.+|++|+|+||+++++++        ++.+.........
T Consensus       213 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~l~~~~~~~~~  284 (404)
T 2o1b_A          213 TDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDM--------IQALKKYQTHTNA  284 (404)
T ss_dssp             SSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHH--------HHHHHHHHHHHCC
T ss_pred             cCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHH--------HHHHHHHHhhccC
Confidence            99999999999998876544555555433467899999999999899999999998877        5666666655556


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCeE
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHIT  235 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi~  235 (272)
                      +.+.+.|.++.++++.. .+++++.+++++++++.+.+.|+++|+++..+++++++|+.++ +.+..++..++++++||.
T Consensus       285 ~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~  363 (404)
T 2o1b_A          285 GMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSIL  363 (404)
T ss_dssp             CCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCEE
T ss_pred             CCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCcceEEEEeCCCCCCHHHHHHHHHHHCCEE
Confidence            68999999999888753 6778999999999999999999998998888878889999997 445667788888767999


Q ss_pred             eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +.||..|+..+.+++|+++..+++++++++++|++++
T Consensus       364 v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l~~~l  400 (404)
T 2o1b_A          364 VAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTELA  400 (404)
T ss_dssp             CEESGGGCGGGTTEEEEECCSCTTHHHHHHHHHHGGG
T ss_pred             EeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence            9999998765578999999778899999999998864

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=6.9e-38  Score=270.86  Aligned_cols=257  Identities=23%  Similarity=0.354  Sum_probs=215.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...+...| +++.+|++ +.++.+|++.+     ++++++++++||||||.+++.+++++|+++|++
T Consensus       121 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~  199 (396)
T 3jtx_A          121 PAIVSPNPFYQIYEGATLLGGGEIHFANCP-APSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDK  199 (396)
T ss_dssp             CEEEEEESCCHHHHHHHHHTTCEEEEEECC-TTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCcHhHHHHHHHcCCEEEEeecC-CCCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHH
Confidence            57777777666 777888889 99999995 44887786654     578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCC-CCCCccc----cCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh
Q 036024           77 NGSIIIFDSAYAAYVTDG-CPRSIYE----IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII  151 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~-~~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~  151 (272)
                      +|+++|+||+|.++.+++ .+.+...    +....+++++++|+||.+|++|+|+||+++++++        .+.+....
T Consensus       200 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~~~~~~  271 (396)
T 3jtx_A          200 YGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAEL--------LKNFLLYR  271 (396)
T ss_dssp             HCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHH--------HHHHHHHH
T ss_pred             cCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHH--------HHHHHHHH
Confidence            999999999999988776 3333322    1223577899999999999999999999998877        66777666


Q ss_pred             hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHh
Q 036024          152 CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEK  231 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~  231 (272)
                      .....+.+.+.|.++.+++..  .+++++.+++++++++.+.+.|.+. +.+..+++++++|+.++..+..++...|+++
T Consensus       272 ~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  348 (396)
T 3jtx_A          272 TYHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFERVIPILQQV-FDVKLPDASFYIWLKVPDGDDLAFARNLWQK  348 (396)
T ss_dssp             HHHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHTTT-SCCCCCSSSSEEEEECTTSCHHHHHHHHHHH
T ss_pred             hhcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhc-CCccCCCeeEEEEEECCCCCHHHHHHHHHHH
Confidence            666667899999999888874  4677899999999999999999986 5666777899999999876777888888888


Q ss_pred             cCeEeeCCCCCCC------CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGP------GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~------~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.||+.|+.      .+.+++|+++..+++++++++++|++++
T Consensus       349 ~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l  395 (396)
T 3jtx_A          349 AAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLY  395 (396)
T ss_dssp             HCEECEEGGGGCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred             CCEEEeCChHhCCcccccCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence            8999999999975      3578999999889999999999999875

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=3.4e-38  Score=272.21  Aligned_cols=261  Identities=26%  Similarity=0.355  Sum_probs=216.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|.++++++.+|++.     .++++++++++||||||.+++.+++++|+++|++
T Consensus       112 d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~  191 (389)
T 1gd9_A          112 EEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVE  191 (389)
T ss_dssp             CEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence            56667666555 777888888 9999999865567666443     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +|+++|+||+|.++.+++. ..++..+.+..+++++++|+||.+|++|+|+||+++++++        .+.+........
T Consensus       192 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~~~~  263 (389)
T 1gd9_A          192 HDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI--------IERMVKFQMYNA  263 (389)
T ss_dssp             TTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHH--------HHHHHHHHTTTT
T ss_pred             cCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHH--------HHHHHHHHhhhc
Confidence            9999999999999887764 4566666544567899999999999899999999998877        666766665555


Q ss_pred             CCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC--CCChHHHHHHHHHhc
Q 036024          156 NGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKT  232 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~  232 (272)
                      .+.+.+.|.++.++++.... +++++++++++++++.+.+.|+++|+++..+++++++|+.++  +.+..++...|++++
T Consensus       264 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  343 (389)
T 1gd9_A          264 TCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEA  343 (389)
T ss_dssp             CSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHT
T ss_pred             cCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhC
Confidence            66889999999888874221 378999999999999999999998988888877889999987  456677778887567


Q ss_pred             CeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          233 HITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       233 gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ||.+.||..|+..+.+++|+++..+++++++++++|++++
T Consensus       344 gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~~  383 (389)
T 1gd9_A          344 RVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVL  383 (389)
T ss_dssp             CEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             CEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            9999999988765678999999889999999999998753

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=1e-37  Score=269.47  Aligned_cols=255  Identities=29%  Similarity=0.374  Sum_probs=216.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCC--CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTS--RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      |.|++..|.+. +...++..| +++.+|.++++++.+|++.+.  +++++++++||||||.+++.+++++|+++|+++|+
T Consensus       116 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~  195 (391)
T 3h14_A          116 DRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGLDLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGA  195 (391)
T ss_dssp             CEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTSCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred             CEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhcCCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCC
Confidence            56777776666 778888899 999999998777877744321  78999999999999999999999999999999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcc
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS  159 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (272)
                      ++|+||+|.++.+++.+.+...+   .+++++++|+||.+|++|+|+||+++++++        .+.+.........+++
T Consensus       196 ~li~De~~~~~~~~~~~~~~~~~---~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~~~~~~~~~~~~~~  264 (391)
T 3h14_A          196 SFISDEIYHGIEYEAKAVTALEL---TDECYVINSFSKYFSMTGWRVGWMVVPEDQ--------VRVVERIAQNMFICAP  264 (391)
T ss_dssp             EEEEECTTTTCBSSSCCCCGGGT---CSSSEEEEESSSTTCCTTSCCEEEECCGGG--------HHHHHHHHHHTTCCCC
T ss_pred             EEEEECcchhcccCCCCcChhhc---CCCEEEEEechhccCCccceeEEEEeCHHH--------HHHHHHHHhhhccCCC
Confidence            99999999998887755555443   467899999999999999999999999887        6677777766677788


Q ss_pred             hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-ecCCCceEEEeecC--CCChHHHHHHHHHhcCeEe
Q 036024          160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV-YGGINAPYVWAHFP--GRKSWDVFAEILEKTHITT  236 (272)
Q Consensus       160 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~gi~v  236 (272)
                      .+.+.++.+++.  ..+++++.+++++++++.+.+.|+++|+.. ..+++++++|+.++  +.+..++...+++++||.+
T Consensus       265 ~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v  342 (391)
T 3h14_A          265 HASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAV  342 (391)
T ss_dssp             HHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEEC
T ss_pred             HHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEE
Confidence            999998888887  557889999999999999999999887654 46667899999987  4467788888888889999


Q ss_pred             eCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          237 VPGSGFGP-GGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       237 ~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      .||+.|+. .+.+++|+++..+++++++++++|+++
T Consensus       343 ~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~  378 (391)
T 3h14_A          343 TPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAF  378 (391)
T ss_dssp             EEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHH
T ss_pred             cCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence            99999986 567899999988999999999999876

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=9.7e-38  Score=268.29  Aligned_cols=256  Identities=25%  Similarity=0.410  Sum_probs=213.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|.  +.++.+|++.+     ++++++++++||||||.+++.+++++|+++|++
T Consensus       112 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~  189 (376)
T 2dou_A          112 DLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARK  189 (376)
T ss_dssp             CEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCHHHHHHHHHHHHH
Confidence            56777776655 777788888 9999998  34777776654     468999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +|+++|+||+|.++.+++.+.++....+..+++++++|+||.+|++|+|+||+++++++        .+.+.........
T Consensus       190 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~~~~~  261 (376)
T 2dou_A          190 HGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEA--------LARLERVKGVIDF  261 (376)
T ss_dssp             TTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHH--------HHHHHHHHHHHCC
T ss_pred             cCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHH--------HHHHHHHHHhccc
Confidence            99999999999998876644455554444567899999999999899999999998877        6666666655555


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCeE
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHIT  235 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi~  235 (272)
                      +.+.+.|.++.++++. ..+++++.+++++++++.+.+.|+++ +.+..+.+++++|+.++ +.+..++...|+++ ||.
T Consensus       262 ~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~  338 (376)
T 2dou_A          262 NQYAGVLRMGVEALKT-PKEVVRGYARVYRERALGMAEALKGV-LSLLPPRATMYLWGRLPEGVDDLEFGLRLVER-GVA  338 (376)
T ss_dssp             CSCHHHHHHHHHHHTS-CHHHHHHHHHHHHHHHHHHHHHHTTT-SEECCCCBSSEEEEECCTTCCHHHHHHHHHHT-TEE
T ss_pred             CCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHh-cCccCCCeeEEEEEECCCCCCHHHHHHHHHHC-CEE
Confidence            6788999999998875 35778999999999999999999998 88887778889999997 44566778888777 999


Q ss_pred             eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +.||+.|+..+.+++|+++..+++++++++++|++++
T Consensus       339 v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l  375 (376)
T 2dou_A          339 LAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL  375 (376)
T ss_dssp             CEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred             EcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence            9999988765578999999779999999999999875

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-38  Score=279.68  Aligned_cols=260  Identities=18%  Similarity=0.275  Sum_probs=213.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCC----------CcccCCCC-----CCCceEEEEecCCCccccCCCHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGN----------NFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQ   66 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~----------~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~   66 (272)
                      |.|++..|++. |...++..| +++.+|+++++          +|.+|++.     .++++++++++||||||.+++.++
T Consensus       143 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~  222 (447)
T 3b46_A          143 DEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREE  222 (447)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred             CEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHH
Confidence            66777777776 788888888 99999987653          46666333     267899999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEcccCCccccCCCCCCcccc-CCCCCceEEEecCccccCCCccceeEEEe-cccccccCCcchH
Q 036024           67 LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVV-PEELLFSSGFPVI  144 (272)
Q Consensus        67 l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~r~G~~~~-~~~~~~~~~~~~~  144 (272)
                      +++|+++|++||+++|+||+|.++.+++...++..+ .+..+++++++|+||.+|++|+|+||+++ ++++        +
T Consensus       223 l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l--------~  294 (447)
T 3b46_A          223 LTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAEL--------L  294 (447)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHH--------H
T ss_pred             HHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHH--------H
Confidence            999999999999999999999998887644455554 22346789999999999999999999999 7777        5


Q ss_pred             HHHHhhhhhccCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC----
Q 036024          145 NDFNRIICTCFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR----  219 (272)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~----  219 (272)
                      +.+.........+.+.+.|.++.++++... .+++++++++++++++.+.+.|+++|+++..+++++|+|++++..    
T Consensus       295 ~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p~  374 (447)
T 3b46_A          295 SYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVKIPE  374 (447)
T ss_dssp             HHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTCCCCT
T ss_pred             HHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecccccCcc
Confidence            666655555556688899998888887432 367889999999999999999999899988888899999999742    


Q ss_pred             ------------ChHHHHHHHHHhcCeEeeCCCCCCCC-----CCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          220 ------------KSWDVFAEILEKTHITTVPGSGFGPG-----GEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       220 ------------~~~~~~~~ll~~~gi~v~~g~~~~~~-----~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                                  +..++..+|++++||.+.||+.|+..     +.+++|+++..+++++++++++|+++
T Consensus       375 ~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~~~l~~~  443 (447)
T 3b46_A          375 DYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLKLL  443 (447)
T ss_dssp             TCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHHGGGG
T ss_pred             ccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHHHHHHHH
Confidence                        34567777887779999999988743     26899999988999999999999764

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.7e-38  Score=273.52  Aligned_cols=260  Identities=25%  Similarity=0.453  Sum_probs=214.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|.++++++.+|++.+     ++++++++++||||||.+++.+++++|+++|++
T Consensus       124 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~  203 (412)
T 2x5d_A          124 DTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQ  203 (412)
T ss_dssp             CEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHH
Confidence            56777666655 777788888 99999998765766553331     678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +|+++|+||+|.++.+.+. ..++..+....+++++++|+||.+|++|+|+||+++++++        ++.+........
T Consensus       204 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~~~~  275 (412)
T 2x5d_A          204 YDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPEL--------VSALARIKSYHD  275 (412)
T ss_dssp             HTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHH--------HHHHHHHHHHHC
T ss_pred             cCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHH--------HHHHHHHHhhhc
Confidence            9999999999999887543 4456665433577899999999999999999999998877        566666665555


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-C---ChHHHHHHHHHh
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-R---KSWDVFAEILEK  231 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~---~~~~~~~~ll~~  231 (272)
                      .+.+.+.|.++.+++... .+++++++++++++++++.+.|+++|+++..+++++++|+.++. .   +..++...|+++
T Consensus       276 ~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~  354 (412)
T 2x5d_A          276 YGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQD  354 (412)
T ss_dssp             CCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHH
Confidence            668899999999888743 46789999999999999999999888888887778899999973 3   566778888777


Q ss_pred             cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.||+.|+..+.+++|+++..+++++++++++|++++
T Consensus       355 ~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l  395 (412)
T 2x5d_A          355 AKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAMF  395 (412)
T ss_dssp             HCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             CCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            79999999998765678999999889999999999998763

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=7.2e-38  Score=272.98  Aligned_cols=261  Identities=20%  Similarity=0.265  Sum_probs=217.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCC----C------CCcccCCCC-----CCCceEEEEecCCCccccCCCHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGP----G------NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQ   66 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~----~------~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~   66 (272)
                      |.|++..|.+. |...++..| +++++|+++    +      .++.+|++.     .++++++++++||||||.+++.++
T Consensus       116 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~  195 (422)
T 3fvs_A          116 DEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREE  195 (422)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred             CEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHH
Confidence            56677666655 888888889 999999986    2      245566433     267899999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHH
Q 036024           67 LEQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN  145 (272)
Q Consensus        67 l~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~  145 (272)
                      +++|+++|+++|+++|+||+|.++.+++. ..++..+....+++++++|+||.+|++|+|+||+++++++        ++
T Consensus       196 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~--------~~  267 (422)
T 3fvs_A          196 LELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHI--------MK  267 (422)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHH--------HH
T ss_pred             HHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHH--------HH
Confidence            99999999999999999999999888764 4566666555678999999999999999999999999887        66


Q ss_pred             HHHhhhhhccCCcchHHHHHHHHhccc------ccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-
Q 036024          146 DFNRIICTCFNGASNIAQAGGLACLSS------EGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-  218 (272)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~a~~~~l~~------~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-  218 (272)
                      .+.........+.+.+.|.++.+++..      ...+++++++++++++++.+.+.|+++|+.+..+++++++|+.++. 
T Consensus       268 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~  347 (422)
T 3fvs_A          268 HLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDF  347 (422)
T ss_dssp             HHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHHH
T ss_pred             HHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEechhh
Confidence            666666666667889999999988874      2346788999999999999999999999998888899999999852 


Q ss_pred             ---CC----------hHHHHHHHHHhcCeEeeCCCCCCC-----CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          219 ---RK----------SWDVFAEILEKTHITTVPGSGFGP-----GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       219 ---~~----------~~~~~~~ll~~~gi~v~~g~~~~~-----~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                         ..          ..++...+++++||.+.||+.|+.     .+.+++|++++.+++++++++++|++++
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l  419 (422)
T 3fvs_A          348 KRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWK  419 (422)
T ss_dssp             HHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence               11          457788888888999999999863     4578999999889999999999998763

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=100.00  E-value=8.2e-38  Score=277.89  Aligned_cols=259  Identities=18%  Similarity=0.195  Sum_probs=209.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-----CceEEEEecCCCccccCCCHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-----RTDIIFFCSPNNPTGHAATQNQLEQLV   71 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-----~~~~i~~~~p~nptG~~~~~~~l~~l~   71 (272)
                      |.|++..|.+. |...++..| ++++++++++++|.+|++.+     +     ++++|+++|||||||.+++.+++++|+
T Consensus       182 d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~  261 (498)
T 3ihj_A          182 TGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVI  261 (498)
T ss_dssp             EEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred             CEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHH
Confidence            46778777666 888888889 99999999888898886653     1     589999999999999999999999999


Q ss_pred             HHHHHcCCEEEEcccCCccccCCC--CCCccccCC-------CCCceEEEecCcccc-CCCccceeEEEe---ccccccc
Q 036024           72 EFARNNGSIIIFDSAYAAYVTDGC--PRSIYEIPG-------AREVAIEISSFSKFS-GFTGVRLGWTVV---PEELLFS  138 (272)
Q Consensus        72 ~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~~~-------~~~~~i~~~s~sK~~-g~~g~r~G~~~~---~~~~~~~  138 (272)
                      ++|+++++++|+||+|+.+.+++.  ..++..+..       ...++++++|+||.+ |++|+|+||+++   ++++   
T Consensus       262 ~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l---  338 (498)
T 3ihj_A          262 HFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEI---  338 (498)
T ss_dssp             HHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHH---
T ss_pred             HHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHH---
Confidence            999999999999999999988753  445544311       123479999999999 789999999984   5555   


Q ss_pred             CCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc-----c----HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC
Q 036024          139 SGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE-----G----LEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN  208 (272)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~  208 (272)
                           ++.+..... ....++.++|.++..++..+     .    .++.+++++.++++++.+.+.|+++ |+++..+++
T Consensus       339 -----~~~l~~~~~-~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~g  412 (498)
T 3ihj_A          339 -----KGQLVKLLS-VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQG  412 (498)
T ss_dssp             -----HHHHHHHHH-HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCB
T ss_pred             -----HHHHHHHHh-ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCe
Confidence                 566665554 34458889999888888741     1    1345678899999999999999998 999999999


Q ss_pred             ceEEEeecC------------CCChHHH-HHHHHHhcCeEeeCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          209 APYVWAHFP------------GRKSWDV-FAEILEKTHITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       209 ~~~~~i~l~------------~~~~~~~-~~~ll~~~gi~v~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      ++|+|+.+.            +..+.++ +.++++++||.+.||+.|+. .++.++|+++..+++++++++++|+++
T Consensus       413 g~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~  489 (498)
T 3ihj_A          413 AMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDF  489 (498)
T ss_dssp             SSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHH
T ss_pred             EEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHH
Confidence            999998764            2233443 67888888999999999984 567899999988999999999999875

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=1.6e-37  Score=266.84  Aligned_cols=253  Identities=19%  Similarity=0.207  Sum_probs=212.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC--CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT--SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~--~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      |.|++..|.+. +...++..| +++++|.++++++.+++++.  ++++++++++||||||.+++.+++++|+++|+++|+
T Consensus       109 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~  188 (376)
T 3ezs_A          109 PTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDF  188 (376)
T ss_dssp             CEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCc
Confidence            67777777666 788888889 99999999876776655442  578999999999999999999999999999999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCC-----CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPG-----AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ++|+||+|.++.+++.+.++.....     ..+++++++|+||.+|++|+|+||+++++++        .+.+.......
T Consensus       189 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~~~~~~~~~  260 (376)
T 3ezs_A          189 ILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRL--------LEKYKAFRAYL  260 (376)
T ss_dssp             EEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHH--------HHHHHHHHTTT
T ss_pred             EEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHH--------HHHHHHHHhhh
Confidence            9999999999888775555544321     3577899999999999999999999998877        66777666666


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCe
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHI  234 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi  234 (272)
                      ..+.+.+.+.++.+++..  .+++++.+++++++++.+.+.|+  ++.  .+.+++++|+.++  +..++...|++++||
T Consensus       261 ~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~--~~~--~~~~~~~~~~~~~--~~~~~~~~l~~~~gi  332 (376)
T 3ezs_A          261 GYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK--NTL--IYPYSFYVYLPVQ--NGENFAKTLYQNEGI  332 (376)
T ss_dssp             CCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST--TCC--CCSBSSEEEEECS--CHHHHHHHHHHHHCC
T ss_pred             cCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc--CCC--CCCcceEEEEECC--CHHHHHHHHHHhCCE
Confidence            667899999999998875  35578899999999999999998  665  5568999999998  567788888875699


Q ss_pred             EeeCCCCCC--CCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          235 TTVPGSGFG--PGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       235 ~v~~g~~~~--~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+.||+.|+  ..+.+++|+++..+++++++++++|++++
T Consensus       333 ~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l  372 (376)
T 3ezs_A          333 ITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYR  372 (376)
T ss_dssp             BCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             EEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence            999999998  45678999999779999999999998763

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=7.1e-37  Score=267.33  Aligned_cols=264  Identities=17%  Similarity=0.271  Sum_probs=213.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|.+++.++.+|++.     .++++++++++||||||.+++.+++++|+++|++
T Consensus       143 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  222 (427)
T 3dyd_A          143 QNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAAR  222 (427)
T ss_dssp             CEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Confidence            56777777666 778888899 9999999876677777443     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +|+++|+||+|.++.+++.. .++..+. ...++++++|+||.||++|+|+||++++++... ..+.+.+.+...... .
T Consensus       223 ~~~~~i~Deay~~~~~~g~~~~~~~~~~-~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~-~~~~i~~~l~~~~~~-~  299 (427)
T 3dyd_A          223 QCVPILADEIYGDMVFSDCKYEPLATLS-TDVPILSCGGLAKRWLVPGWRLGWILIHDRRDI-FGNEIRDGLVKLSQR-I  299 (427)
T ss_dssp             TTCCEEEECTTTTCBCSSCCCCCGGGGC-SSCCEEEEEESTTTSSCGGGCCEEEEEECSTTS-SHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEEcCchhhccCCCcCccHHHhC-CCCcEEEEeeccccCCCcCcceEEEEecCcchh-hHHHHHHHHHHHHhc-c
Confidence            99999999999998887643 3444443 235679999999999999999999999863200 001124455444333 3


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC------CCChHHHHHHH
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP------GRKSWDVFAEI  228 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~------~~~~~~~~~~l  228 (272)
                      .+++.++|.++.+++.....+++++++++++++++.+.+.|+++ |+.+..+++++|+|+.++      ..+..+++.++
T Consensus       300 ~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l  379 (427)
T 3dyd_A          300 LGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERL  379 (427)
T ss_dssp             CCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHH
Confidence            55899999999999986566788999999999999999999998 899888888999999886      24567888888


Q ss_pred             HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++++||.+.||+.|+.  ++++|+++..+++++++++++|++++
T Consensus       380 ~~~~gV~v~~g~~~~~--~~~iRis~~~~~e~i~~~l~~l~~~l  421 (427)
T 3dyd_A          380 VAEQSVHCLPATCFEY--PNFIRVVITVPEVMMLEACSRIQEFC  421 (427)
T ss_dssp             HHHHCEECEEGGGGTC--TTEEEEESCSCHHHHHHHHHHHHHHH
T ss_pred             HHHCCEEEECCcccCC--CCeEEEEECCCHHHHHHHHHHHHHHH
Confidence            8777999999998864  68999999889999999999998763

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=2.6e-37  Score=266.57  Aligned_cols=257  Identities=19%  Similarity=0.278  Sum_probs=211.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|.+++ ++.+|++.     .++++++++++||||||.+++.+++++|+++|++
T Consensus       116 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~  194 (386)
T 1u08_A          116 DEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAG  194 (386)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTT
T ss_pred             CEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHH
Confidence            56677666555 778888888 9999999765 45556433     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +|+++|+||+|.++.+++. ..++..+.+..+++++++|+||.+|++|+|+||+++++++        .+.+........
T Consensus       195 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~~~~  266 (386)
T 1u08_A          195 HEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPI--------SAEIRKVHQYLT  266 (386)
T ss_dssp             SCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHH--------HHHHHHHHHHHT
T ss_pred             cCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHH--------HHHHHHHHHhhc
Confidence            9999999999999887653 3344444222467899999999999899999999998877        566666555445


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC---CChHHHHHHHHHhc
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG---RKSWDVFAEILEKT  232 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~~  232 (272)
                      .+.+.+.|.++.++++.. .+++++.+++++++++++.+.|+++|+++..+++++++|+.++.   .+..++...+++++
T Consensus       267 ~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~  345 (386)
T 1u08_A          267 FSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEH  345 (386)
T ss_dssp             SSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHS
T ss_pred             cCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhC
Confidence            567888898888888743 56788999999999999999999989998888778999999985   35677777788777


Q ss_pred             CeEeeCCCCCCC--CCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024          233 HITTVPGSGFGP--GGEEYIRISGFGHRESILEASRRLEA  270 (272)
Q Consensus       233 gi~v~~g~~~~~--~~~~~~R~s~~~~~~~i~~~l~~l~~  270 (272)
                      ||.+.||..|+.  .+++++|+++..+++++++++++|++
T Consensus       346 gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~  385 (386)
T 1u08_A          346 GVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ  385 (386)
T ss_dssp             CEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred             CEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence            999999988864  35789999998899999999999976

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=6.5e-37  Score=265.57  Aligned_cols=260  Identities=18%  Similarity=0.237  Sum_probs=215.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCC----CCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGP----GNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~----~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..|.+. +...++..| +++.+|.+.    +.++.+|++.+     ++++++++++||||||.+++.+++++|++
T Consensus       127 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~  206 (407)
T 3nra_A          127 DKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAA  206 (407)
T ss_dssp             CEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             CEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHHHHHHHHH
Confidence            56777766665 777888888 999999853    23555664442     47899999999999999999999999999


Q ss_pred             HHHHcCCEEEEcccCCccccCCCC-CCccccC-CCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024           73 FARNNGSIIIFDSAYAAYVTDGCP-RSIYEIP-GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI  150 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~~~-~~~~~~~-~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~  150 (272)
                      +|+++|+++|+||+|..+.+++.. .++..+. ...+++++++|+||.+|++|+|+||+++++++        ++.+...
T Consensus       207 ~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~l~~~  278 (407)
T 3nra_A          207 LAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAI--------IARMEKL  278 (407)
T ss_dssp             HHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHH--------HHHHHHH
T ss_pred             HHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHH--------HHHHHHH
Confidence            999999999999999998887643 3455554 45678899999999999999999999998877        6677766


Q ss_pred             hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC--CChHHHHHH
Q 036024          151 ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG--RKSWDVFAE  227 (272)
Q Consensus       151 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~--~~~~~~~~~  227 (272)
                      ......+++.+.+.++.+++.. ...++++.+++++++++++.+.|+++ ++.+..+++++++|+.++.  .+..++...
T Consensus       279 ~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (407)
T 3nra_A          279 QAIVSLRAAGYSQAVLRGWFDE-APGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAEFVKI  357 (407)
T ss_dssp             HHHHTSSSCHHHHGGGGGTTCC-CTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHHHHHH
T ss_pred             HhhhccCCChHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHHHHHH
Confidence            6666666788888888888773 33567888899999999999999998 8998888788999999974  466777788


Q ss_pred             HHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      |++++||.+.||+.|++.+.+++|+++..+++++++++++|++++
T Consensus       358 l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~  402 (407)
T 3nra_A          358 LRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLV  402 (407)
T ss_dssp             HHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             HHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHH
Confidence            877789999999999887889999999889999999999998763

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=100.00  E-value=4.3e-37  Score=267.04  Aligned_cols=260  Identities=20%  Similarity=0.272  Sum_probs=215.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCC---------CCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGP---------GNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQL   67 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~---------~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l   67 (272)
                      |.|++..|.+. |...+...| +++.+++++         +.++.+|++.     .++++++++++||||||.+++++++
T Consensus       110 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l  189 (410)
T 3e2y_A          110 DEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQEL  189 (410)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred             CEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHH
Confidence            56777776665 778888888 999999873         1345555332     2678999999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHH
Q 036024           68 EQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND  146 (272)
Q Consensus        68 ~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~  146 (272)
                      ++|+++|+++|+++|+||+|.++.+++. ..++..+....+++++++|+||.+|++|+|+||++++++.        ++.
T Consensus       190 ~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~--------~~~  261 (410)
T 3e2y_A          190 QVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHL--------IKH  261 (410)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHH--------HHH
T ss_pred             HHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHH--------HHH
Confidence            9999999999999999999999888764 4466666656688999999999999999999999999887        666


Q ss_pred             HHhhhhhccCCcchHHHHHHHHhccc------ccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC-
Q 036024          147 FNRIICTCFNGASNIAQAGGLACLSS------EGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR-  219 (272)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~a~~~~l~~------~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~-  219 (272)
                      +.........+.+.+.|.++.+++.+      ...+++++++++++++++.+.+.|+++|+.+..+++++++|+.++.. 
T Consensus       262 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~  341 (410)
T 3e2y_A          262 LQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLG  341 (410)
T ss_dssp             HHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGC
T ss_pred             HHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhh
Confidence            76666666667899999999988873      23467889999999999999999999999998888999999988521 


Q ss_pred             ---C--------hHHHHHHHHHhcCeEeeCCCCCCCC-----CCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          220 ---K--------SWDVFAEILEKTHITTVPGSGFGPG-----GEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       220 ---~--------~~~~~~~ll~~~gi~v~~g~~~~~~-----~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                         +        ..+++.++++++||.+.||+.|+..     +.+++|++++.+++++++++++|+++
T Consensus       342 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~l~~~l~~l~~~  409 (410)
T 3e2y_A          342 ADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRAW  409 (410)
T ss_dssp             CCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCCHHHHHHHHHHHHTC
T ss_pred             cccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHhc
Confidence               1        2377788888889999999998642     36899999988999999999999874

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=6.9e-37  Score=267.45  Aligned_cols=261  Identities=20%  Similarity=0.305  Sum_probs=213.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCC--------CcccCCCC-----CCCceEEEEecCCCccccCCCHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGN--------NFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLE   68 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~--------~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~   68 (272)
                      |.|++..|.+. +...++..| +++.+|.+++.        ++.+|++.     .++++++++++|+||||.++++++++
T Consensus       126 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~  205 (429)
T 1yiz_A          126 DEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELE  205 (429)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred             CEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHH
Confidence            56777666555 777788888 99999998653        45556443     26789999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHH
Q 036024           69 QLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDF  147 (272)
Q Consensus        69 ~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~  147 (272)
                      +|+++|+++|+++|+||+|.++.+++. ..++..+.+..++++++.|+||.+|++|+|+||+++++++        ++.+
T Consensus       206 ~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l  277 (429)
T 1yiz_A          206 VVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEAL--------LKNL  277 (429)
T ss_dssp             HHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHH--------HHHH
T ss_pred             HHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHH--------HHHH
Confidence            999999999999999999999887653 3455555434567899999999999899999999998877        5666


Q ss_pred             HhhhhhccCCcchHHHHHHHHhccc-----cc-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC--
Q 036024          148 NRIICTCFNGASNIAQAGGLACLSS-----EG-LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR--  219 (272)
Q Consensus       148 ~~~~~~~~~~~~~~~~~a~~~~l~~-----~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~--  219 (272)
                      .........+.+.+.|.++.++++.     .. .+++++.+++++++++.+.+.|+++|+.+..+++++++|+.++..  
T Consensus       278 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~  357 (429)
T 1yiz_A          278 QMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDS  357 (429)
T ss_dssp             HHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEEECCSSCT
T ss_pred             HHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEEcccccc
Confidence            6655555666888999989888875     22 467889999999999999999998899988877899999999752  


Q ss_pred             -----------ChHHHHHHHHHhcCeEeeCCCCCCCC-----CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          220 -----------KSWDVFAEILEKTHITTVPGSGFGPG-----GEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       220 -----------~~~~~~~~ll~~~gi~v~~g~~~~~~-----~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                                 +..++..+|++++||.+.||+.|+..     +.+++|+++..+++++++++++|++++
T Consensus       358 ~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l  426 (429)
T 1yiz_A          358 KVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWK  426 (429)
T ss_dssp             TTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHHHHHHS
T ss_pred             cccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence                       34567777877779999999888642     268999999889999999999999875

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=8.7e-37  Score=263.64  Aligned_cols=254  Identities=24%  Similarity=0.359  Sum_probs=210.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|.++++++.+|++.     .++++++++++|+||||.+++.+++++|+++|++
T Consensus       126 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~  205 (389)
T 1o4s_A          126 DEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKK  205 (389)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            56677666555 778888888 9999999865566666433     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +|+++|+||+|.++.+++...++..+....+++++++|+||.+|++|+|+||+++++++        .+.+.........
T Consensus       206 ~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~--------~~~l~~~~~~~~~  277 (389)
T 1o4s_A          206 RNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKV--------ATAVSKIQSHTTS  277 (389)
T ss_dssp             HTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHH--------HHHHHHHHHHHTC
T ss_pred             cCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHH--------HHHHHHHhhhccc
Confidence            99999999999988876544566666443567899999999999899999999998877        5666666655555


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT  236 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v  236 (272)
                      +++.+.|.++.+++...    .++.+++++++++++.+.|+++|+++..+.+++++|+.++ .+..++...|++++||.+
T Consensus       278 ~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v  352 (389)
T 1o4s_A          278 CINTVAQYAALKALEVD----NSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVR-GDDVKFCERLLEEKKVAL  352 (389)
T ss_dssp             SCCHHHHHHHHHHTTCC----CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEECS-SCHHHHHHHHHHHHCEEC
T ss_pred             CCCHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHhcCCeeecCCcceEEEEeCC-CCHHHHHHHHHHHCCEEE
Confidence            67888999888888754    4788899999999999999998988887778889999987 456777888875669999


Q ss_pred             eCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       237 ~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .||..|+.  ++++|+++..+++++++++++|++++
T Consensus       353 ~~g~~f~~--~~~~Ris~~~~~~~l~~~l~~l~~~l  386 (389)
T 1o4s_A          353 VPGSAFLK--PGFVRLSFATSIERLTEALDRIEDFL  386 (389)
T ss_dssp             EEGGGGTC--TTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             eCchhcCC--CCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence            99998875  46999999889999999999998763

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=100.00  E-value=1.5e-36  Score=265.17  Aligned_cols=258  Identities=21%  Similarity=0.296  Sum_probs=208.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--------------CCCceEEEEe-cCCCccccCCCHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--------------TSRTDIIFFC-SPNNPTGHAATQN   65 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--------------~~~~~~i~~~-~p~nptG~~~~~~   65 (272)
                      |.|++..|.+. |...++..| +++.+|++++ ++.+| +++              .+++++++++ +||||||.+++.+
T Consensus       133 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~  211 (425)
T 2r2n_A          133 DNVLLDEPAYSGTLQSLHPLGCNIINVASDES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSE  211 (425)
T ss_dssp             CEEEEESSCCHHHHHHHGGGTCEEEEECEETT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHcCCEEEEeCcCCC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHH
Confidence            66777777666 888888889 9999998754 44443 221              1368888874 9999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchH
Q 036024           66 QLEQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI  144 (272)
Q Consensus        66 ~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~  144 (272)
                      ++++|+++|+++|+++|+||+|.++.+++. ..++..+. ..+++++++|+||.+| +|+|+||+++++++        +
T Consensus       212 ~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l--------~  281 (425)
T 2r2n_A          212 RKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMD-VDGRVIRADSFSKIIS-SGLRIGFLTGPKPL--------I  281 (425)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGC-TTSCEEEEEESTTTTC-STTCCEEEEEEHHH--------H
T ss_pred             HHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccC-CCCCEEEEccchhhcc-CccceEEEecCHHH--------H
Confidence            999999999999999999999999887653 44566654 3468899999999998 99999999999887        6


Q ss_pred             HHHHhhhhhccCCcchHHHHHHHHhcccc---c-HHHHHHHHHHHHHHHHHHHHHHHhC--CC-eEecCCCceEEEeecC
Q 036024          145 NDFNRIICTCFNGASNIAQAGGLACLSSE---G-LEAVHSVVDYYKENTKILIDTLASL--GI-KVYGGINAPYVWAHFP  217 (272)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~-~~~~~~~~~~~~~~~~~l~~~L~~~--g~-~~~~~~~~~~~~i~l~  217 (272)
                      +.+.........+++.++|.++.++++..   . .++++++++.++++++.+.+.|++.  |+ .+..+++|+|+|+.++
T Consensus       282 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~  361 (425)
T 2r2n_A          282 ERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVK  361 (425)
T ss_dssp             HHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEET
T ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeC
Confidence            67776666666678999999999998752   1 3678899999999999999999884  76 5667788999999998


Q ss_pred             C-CChHHHHHHHHHhcCeEeeCCCCCCCC---CCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          218 G-RKSWDVFAEILEKTHITTVPGSGFGPG---GEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       218 ~-~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                      . .+..+++.+.+.++||.+.||+.|+..   +.+++|++++ .+++++++++++|++++
T Consensus       362 ~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l  421 (425)
T 2r2n_A          362 GINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLI  421 (425)
T ss_dssp             TCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence            5 345554455556679999999999753   3589999986 69999999999998763

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=100.00  E-value=6.6e-37  Score=272.36  Aligned_cols=259  Identities=17%  Similarity=0.197  Sum_probs=209.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C------CceEEEEecCCCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S------RTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~------~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      |.|++..|.+. |...++..| +++.++++++++|.+|++.+     +      ++++|++++||||||.+++.+++++|
T Consensus       183 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i  262 (500)
T 3tcm_A          183 DGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDI  262 (500)
T ss_dssp             EEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             CEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHH
Confidence            56777777776 888888889 99999999888888886552     1      78999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEcccCCccccCCC--CCCccc----cC--CCCCceEEEecCcccc-CCCccceeEEEe---ccccccc
Q 036024           71 VEFARNNGSIIIFDSAYAAYVTDGC--PRSIYE----IP--GAREVAIEISSFSKFS-GFTGVRLGWTVV---PEELLFS  138 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~----~~--~~~~~~i~~~s~sK~~-g~~g~r~G~~~~---~~~~~~~  138 (272)
                      +++|+++++++|+||+|+++.+++.  ..++..    +.  ....++++++|+||.+ |++|+|+||+++   ++++   
T Consensus       263 ~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~---  339 (500)
T 3tcm_A          263 VKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPV---  339 (500)
T ss_dssp             HHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTH---
T ss_pred             HHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHH---
Confidence            9999999999999999999888643  334332    21  1224579999999999 899999999998   6666   


Q ss_pred             CCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc---------cHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC
Q 036024          139 SGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE---------GLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN  208 (272)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~  208 (272)
                           ++.+..... ....++.++|.++..++...         ..++.++++++++++++.+.+.|+++ |+.+..+++
T Consensus       340 -----~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g  413 (500)
T 3tcm_A          340 -----REQIYKIAS-VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEG  413 (500)
T ss_dssp             -----HHHHHHHHH-TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCB
T ss_pred             -----HHHHHHHHh-cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCe
Confidence                 566655554 34558889999888888732         22567888899999999999999998 999999999


Q ss_pred             ceEEEeecCC------------C-ChHHHHHHHHHhcCeEeeCCCCCCC-CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          209 APYVWAHFPG------------R-KSWDVFAEILEKTHITTVPGSGFGP-GGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       209 ~~~~~i~l~~------------~-~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      ++|+|+.+.-            . .+..++.++++++||.+.||+.|+. .+.+++|+++..+++++++++++|+++
T Consensus       414 ~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~  490 (500)
T 3tcm_A          414 AMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVF  490 (500)
T ss_dssp             TTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHHHHHHHHHH
T ss_pred             EEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
Confidence            9999976541            1 1233456788888999999999984 567899999988889999999999875

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=1.3e-36  Score=267.07  Aligned_cols=257  Identities=18%  Similarity=0.291  Sum_probs=210.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--------CCCceEEE-EecCCCccccCCCHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--------TSRTDIIF-FCSPNNPTGHAATQNQLEQLV   71 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--------~~~~~~i~-~~~p~nptG~~~~~~~l~~l~   71 (272)
                      |.|++..|.+. +...++..| +++.+|.+++ ++.+| +++        .+++++++ +++||||||.+++.+++++|+
T Consensus       165 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~  243 (448)
T 3aow_A          165 DIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLL  243 (448)
T ss_dssp             CEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHH
T ss_pred             CEEEEeCCChHHHHHHHHHcCCEEEEeccCCC-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHH
Confidence            56777777665 778888889 9999999765 44443 322        13788886 469999999999999999999


Q ss_pred             HHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024           72 EFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI  150 (272)
Q Consensus        72 ~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~  150 (272)
                      ++|+++|+++|+||+|.++.+++. ..++..+. ..+++++++||||.+| +|+|+||+++++++        ++.+...
T Consensus       244 ~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~-~~~~vi~~~S~SK~~~-~GlriG~v~~~~~l--------~~~l~~~  313 (448)
T 3aow_A          244 ELASEYDFIVVEDDPYGELRYSGNPEKKIKALD-NEGRVIYLGTFSKILA-PGFRIGWMVGDPGI--------IRKMEIA  313 (448)
T ss_dssp             HHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGC-TTSCEEEEEESTTTTC-GGGCCEEEEECHHH--------HHHHHHH
T ss_pred             HHHHHcCCEEEEECCCccccCCCCCCcCHHhcC-CCCCEEEEccchhhcc-ccccEEEEEeCHHH--------HHHHHHH
Confidence            999999999999999999888654 34555653 3467899999999999 99999999999877        5666665


Q ss_pred             hhhccCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhC---CCeEecCCCceEEEeecC-CCChHHHH
Q 036024          151 ICTCFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASL---GIKVYGGINAPYVWAHFP-GRKSWDVF  225 (272)
Q Consensus       151 ~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~i~l~-~~~~~~~~  225 (272)
                      ......+++.+.|.++.+++.... .++++++++.++++++.+.+.|++.   |+.+..+.+|+|+|+.++ +.+..++.
T Consensus       314 ~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~~~~~~l~  393 (448)
T 3aow_A          314 KQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGIDSKKML  393 (448)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTTCCHHHHH
T ss_pred             HHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCCCCHHHHH
Confidence            555555678999999999998542 3778999999999999999999875   788888888999999998 45667788


Q ss_pred             HHHHHhcCeEeeCCCCCCCC--CCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          226 AEILEKTHITTVPGSGFGPG--GEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       226 ~~ll~~~gi~v~~g~~~~~~--~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      ..++++ ||.+.||..|++.  +++++|+++.. +++++++++++|++++
T Consensus       394 ~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l  442 (448)
T 3aow_A          394 ERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETI  442 (448)
T ss_dssp             HHHHHT-TEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHH
T ss_pred             HHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence            888877 9999999988753  46899999865 7899999999998763

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=9.9e-37  Score=266.98  Aligned_cols=260  Identities=20%  Similarity=0.292  Sum_probs=210.6

Q ss_pred             cccccccCccc-chHHhc-ccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVG-KYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~-~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..|.+. +...+. ..| ++++++.++++++.+|++.+           +++++|++++||||||.+++.+++++
T Consensus       136 d~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~  215 (435)
T 3piu_A          136 EAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYL  215 (435)
T ss_dssp             CEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             CeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHH
Confidence            66777776665 666666 678 99999999877777775542           37899999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccCCccccCCCC-CCccccCCC---------CCceEEEecCccccCCCccceeEEEecccccccC
Q 036024           70 LVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYEIPGA---------REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS  139 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~---------~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~  139 (272)
                      |+++|+++|+++|+||+|.++.+++.. .++..+...         ++++++++|+||.+|++|+|+||++++++.+   
T Consensus       216 l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~---  292 (435)
T 3piu_A          216 LLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMV---  292 (435)
T ss_dssp             HHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHH---
T ss_pred             HHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHH---
Confidence            999999999999999999987776542 333333222         6788999999999999999999999966542   


Q ss_pred             CcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC
Q 036024          140 GFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP  217 (272)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~  217 (272)
                          .+.+.....  ..+.+.+.+.++.+++.....  +++++.+++++++++++.+.|++.|+++..+++++++|+.++
T Consensus       293 ----~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~l~  366 (435)
T 3piu_A          293 ----VAAATKMSS--FGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMR  366 (435)
T ss_dssp             ----HHHHHHHGG--GSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCCCSSSEEEEECG
T ss_pred             ----HHHHHHHhh--cCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEEcc
Confidence                444443322  334778888888888875443  467888999999999999999999999988888899999997


Q ss_pred             CC-------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          218 GR-------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       218 ~~-------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      ..       ...++..++++++||.+.||+.|++.+++++|+++.. +++++++++++|++++
T Consensus       367 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l  429 (435)
T 3piu_A          367 HLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFV  429 (435)
T ss_dssp             GGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             cccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence            42       3456778888888999999999988788999999976 8999999999998763

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=100.00  E-value=9.8e-37  Score=265.10  Aligned_cols=260  Identities=23%  Similarity=0.267  Sum_probs=211.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCC-CCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPG-NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~-~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..|.+. +...++..| +++.+|.+++ .++.+|++.     .++++++++++|+||||.+++.+++++|+++|+
T Consensus       111 d~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~  190 (411)
T 2o0r_A          111 SEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAV  190 (411)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHH
Confidence            56777766555 777888888 9999998754 345566443     257899999999999999999999999999999


Q ss_pred             HcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           76 NNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      ++|+++|+||+|.++.+++. ..++..+....+++++++|+||.+|++|+|+||+++++++        .+.+.......
T Consensus       191 ~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~~~  262 (411)
T 2o0r_A          191 AANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAEL--------IAGVRAAKQYL  262 (411)
T ss_dssp             HTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHH--------HHHHHHHHHHH
T ss_pred             HcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHH--------HHHHHHHHhhc
Confidence            99999999999999887653 3455555434567899999999999999999999998777        55665555444


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC---CChHHHHHHHHHh
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG---RKSWDVFAEILEK  231 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~  231 (272)
                      ..+.+.+.|.++.++++.. .+++++++++++++++++.+.|++.|+++..+++++++|+.++.   .+..++..+++++
T Consensus       263 ~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~  341 (411)
T 2o0r_A          263 SYVGGAPFQPAVALALDTE-DAWVAALRNSLRARRDRLAAGLTEIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEK  341 (411)
T ss_dssp             TSCCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHH
T ss_pred             cCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCCEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence            4557778888888888643 67788999999999999999999889998888788899999974   4567778888877


Q ss_pred             cCeEeeCCCCCCC-C----------CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGP-G----------GEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~-~----------~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.||+.|.. .          +.+++|+++..+++++++++++|++++
T Consensus       342 ~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~~  393 (411)
T 2o0r_A          342 VGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLA  393 (411)
T ss_dssp             HSEECEEGGGGSCCC--------CCGGGCEEEECCSCHHHHHHHHHHHGGGG
T ss_pred             CCEEEcChhhhCCCccccccccccCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            7999999988843 2          467899999889999999999998763

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=6.5e-37  Score=263.01  Aligned_cols=255  Identities=19%  Similarity=0.268  Sum_probs=211.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|.+++    +|++.+     ++++++++++||||||.+++.+++++|+++|++
T Consensus       106 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~  181 (377)
T 3fdb_A          106 SKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHR  181 (377)
T ss_dssp             CCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            66777766666 778888889 9999999865    453331     568999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCC--CCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhhh
Q 036024           77 NGSIIIFDSAYAAYVTDG--CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +|+++|+||+|.++.+++  ...++..+.. .+++++++|+||.+|++|+|+||+++++ ++        .+.+......
T Consensus       182 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~--------~~~~~~~~~~  252 (377)
T 3fdb_A          182 YDARVLVDEIHAPLVFDGQHTVAAGVSDTA-ASVCITITAPSKAWNIAGLKCAQIIFSNPSD--------AEHWQQLSPV  252 (377)
T ss_dssp             TTCEEEEECTTGGGBSSSCCCCGGGSCHHH-HHHEEEEECSTTTTTCGGGCCEEEECCSHHH--------HHHHHHSCHH
T ss_pred             cCCEEEEEcccchhhcCCCCCcccHHHccC-CCcEEEEEeChHhccCcchhheEEEeCCHHH--------HHHHHHHHHh
Confidence            999999999999988776  2334444322 4678999999999999999999988854 44        5666666555


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCCCceEEEeecCCC-ChHHHHHHHHH
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPYVWAHFPGR-KSWDVFAEILE  230 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~  230 (272)
                      ...+.+.+++.++.+++.. ..+++++++++++++++++.+.|++.  |+++..+++++++|+.++.. .+.++...+++
T Consensus       253 ~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  331 (377)
T 3fdb_A          253 IKDGASTLGLIAAEAAYRY-GTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIEGSPSEFFIE  331 (377)
T ss_dssp             HHCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCCSCHHHHHHH
T ss_pred             hcCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCCCHHHHHHHHH
Confidence            5567899999988888874 35778999999999999999999985  89999988888999999852 34577888888


Q ss_pred             hcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          231 KTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       231 ~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++||.+.||+.|+..+.+++|+++..+++++++++++|++++
T Consensus       332 ~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l  373 (377)
T 3fdb_A          332 KAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAV  373 (377)
T ss_dssp             HHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             hCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHH
Confidence            889999999999876789999999889999999999998763

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=2.6e-36  Score=260.38  Aligned_cols=260  Identities=16%  Similarity=0.273  Sum_probs=214.6

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecC-CCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG-PGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~-~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.+. +...++..| +++.+|.+ .++.|.+|++.      .++++++++++||||||.+++++++++|+++|
T Consensus       110 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~  189 (391)
T 3dzz_A          110 DQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELC  189 (391)
T ss_dssp             CEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHH
T ss_pred             CeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHH
Confidence            56777776666 777888888 99999996 34456666443      16899999999999999999999999999999


Q ss_pred             HHcCCEEEEcccCCccccCCC-CCCccccCC-CCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhh
Q 036024           75 RNNGSIIIFDSAYAAYVTDGC-PRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRII  151 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~  151 (272)
                      +++|+++|+||+|.++.+.+. ..++..+.. .+++++++.|+||.+|++|+|+||++++ +++        .+.+....
T Consensus       190 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~--------~~~~~~~~  261 (391)
T 3dzz_A          190 AKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDL--------RARAEESF  261 (391)
T ss_dssp             HHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHH--------HHHHHHHH
T ss_pred             HHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHH--------HHHHHHHH
Confidence            999999999999999887763 455555542 2578999999999999999999999998 555        55665554


Q ss_pred             h-hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCCceEEEeecC--CCChHHHHH
Q 036024          152 C-TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGINAPYVWAHFP--GRKSWDVFA  226 (272)
Q Consensus       152 ~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~  226 (272)
                      . ....+.+.+++.++.+++.. ..+++++.+++++++++++.+.|++ + |+.+..+.+++++|+.++  +.+..++..
T Consensus       262 ~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (391)
T 3dzz_A          262 FLAGIGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMNAEDFCK  340 (391)
T ss_dssp             HHHTCSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSCHHHHHH
T ss_pred             HhhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCCHHHHHH
Confidence            3 33445888888888888874 4577899999999999999999998 4 899998888999999997  356778888


Q ss_pred             HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .|++++||.+.||+.|+..+.+++|+++..+++++++++++|++++
T Consensus       341 ~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l  386 (391)
T 3dzz_A          341 YLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGV  386 (391)
T ss_dssp             HHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            8876679999999999877789999999889999999999998763

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=5.1e-36  Score=258.52  Aligned_cols=260  Identities=18%  Similarity=0.274  Sum_probs=213.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecC--CCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG--PGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~--~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..|.+. +...++..| +++.+|.+  .+++|.+|++.    +.+++++++++|+||||.+++++++++|+++|+
T Consensus       115 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~  194 (391)
T 4dq6_A          115 DKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICL  194 (391)
T ss_dssp             CEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHH
T ss_pred             CEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhcCCEEEEECCCCCCCcCcCHHHHHHHHHHHH
Confidence            56777776666 778888889 99999998  45567777544    223899999999999999999999999999999


Q ss_pred             HcCCEEEEcccCCccccCCC-CCCccccCC-CCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhh
Q 036024           76 NNGSIIIFDSAYAAYVTDGC-PRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~  152 (272)
                      ++|+++|+||+|.++.+++. ..++..+.. ..+++++++|+||.+|++|+|+||+++++ ++        .+.+.....
T Consensus       195 ~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~--------~~~~~~~~~  266 (391)
T 4dq6_A          195 KHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKD--------YKLLDDAFT  266 (391)
T ss_dssp             HTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHH--------HHHHHHHHH
T ss_pred             HcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHH--------HHHHHHHHH
Confidence            99999999999999887754 334444431 13678999999999999999999999987 55        556655543


Q ss_pred             -hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCCceEEEeecC--CCChHHHHHH
Q 036024          153 -TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGINAPYVWAHFP--GRKSWDVFAE  227 (272)
Q Consensus       153 -~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~~  227 (272)
                       ....+++.+++.++.+++.. ..+++++.+++++++++++.+.|++ + |+.+..+++++++|+.++  +.+..++...
T Consensus       267 ~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (391)
T 4dq6_A          267 RIDIKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSDEELESI  345 (391)
T ss_dssp             HTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCCCHHHHHHH
T ss_pred             hhcCCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCCCHHHHHHH
Confidence             23446788888888888874 4567899999999999999999988 4 899998888899999997  4567788888


Q ss_pred             HHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      |++++||.+.||+.|+..+.+++|+++..+++++++++++|++++
T Consensus       346 l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l  390 (391)
T 4dq6_A          346 LVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI  390 (391)
T ss_dssp             HHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             HHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence            877779999999999877789999999889999999999998864

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=2e-36  Score=261.04  Aligned_cols=257  Identities=25%  Similarity=0.376  Sum_probs=210.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...++..| +++.+|.+++.++.+|++.     .++++++++++|+||||.+++.+++++|+++|++
T Consensus       115 d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~  194 (388)
T 1j32_A          115 DEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVE  194 (388)
T ss_dssp             CEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence            56777766555 777788888 9999999865566666443     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCC-CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +|+++|+||+|.++.+++. ..++..+.. ..+++++++|+||.+|++|+|+||+++++++        .+.+.......
T Consensus       195 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~~~  266 (388)
T 1j32_A          195 AGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPL--------VKAATKIQGHS  266 (388)
T ss_dssp             HTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHH--------HHHHHHHHHTT
T ss_pred             cCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHH--------HHHHHHHHhhc
Confidence            9999999999999887653 234444431 1356799999999999899999999998877        56666666555


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC--CCChHHHHHHHHHh
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP--GRKSWDVFAEILEK  231 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~  231 (272)
                      ..+++.+.|.++.+++.. ..+++++.+++++++++++.+.|+++ |+++..+.+++++|+.++  +.+..++...|+++
T Consensus       267 ~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  345 (388)
T 1j32_A          267 TSNVCTFAQYGAIAAYEN-SQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQ  345 (388)
T ss_dssp             TCSCCHHHHHHHHHHHHS-CSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEEEEEecCCCCCCHHHHHHHHHHh
Confidence            566888899888888873 34677889999999999999999998 898888878889999886  34667788888776


Q ss_pred             cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      +||.+.||..|+.  ++++|+++..+++++++++++|+++
T Consensus       346 ~gi~v~~g~~~~~--~~~iRis~~~~~~~i~~~~~~l~~~  383 (388)
T 1j32_A          346 HQVATVPGAAFGA--DDCIRLSYATDLDTIKRGMERLEKF  383 (388)
T ss_dssp             HCEECEEGGGGTC--TTBEEEECCSCHHHHHHHHHHHHHH
T ss_pred             CCEEEeChhhhCC--CCcEEEEecCCHHHHHHHHHHHHHH
Confidence            7999999998865  5789999988999999999999875

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=100.00  E-value=5e-36  Score=261.94  Aligned_cols=259  Identities=20%  Similarity=0.268  Sum_probs=205.9

Q ss_pred             cccccccCccc-chHHhc-ccc-eeEEeecCCCCCcccCCCCC-----------CCceEEEEecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVG-KYC-NIEYLECGPGNNFFPDLKGT-----------SRTDIIFFCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~-~~g-~~~~~~~~~~~~~~~dl~~~-----------~~~~~i~~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..|.+. |...+. ..| +++++|.+.+.++.+|++.+           ++++++++++||||||.+++.+++++
T Consensus       133 d~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~  212 (428)
T 1iay_A          133 DAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKS  212 (428)
T ss_dssp             CEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             CeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHH
Confidence            56777776666 655444 577 99999997665676664431           36899999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCC-------CCceEEEecCccccCCCccceeEEEec-ccccccCC
Q 036024           70 LVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGA-------REVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSG  140 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~-------~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~  140 (272)
                      |+++|+++|+++|+||+|.++.+++. ..++..+...       .++++++.|+||.+|++|+|+||++++ ++.     
T Consensus       213 l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~-----  287 (428)
T 1iay_A          213 VLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDV-----  287 (428)
T ss_dssp             HHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHH-----
T ss_pred             HHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHH-----
Confidence            99999999999999999998776643 2344444322       578899999999999999999999995 444     


Q ss_pred             cchHHHHHhhhhhccCCcchHHHHHHHHhccccc--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC
Q 036024          141 FPVINDFNRIICTCFNGASNIAQAGGLACLSSEG--LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG  218 (272)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~  218 (272)
                         ++.+.....  ..+.+.++|.++.+++....  .+++++.+++++++++++.+.|+++|+++..+++|+|+|+.++.
T Consensus       288 ---~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~  362 (428)
T 1iay_A          288 ---VNCARKMSS--FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRP  362 (428)
T ss_dssp             ---HHHHHHHHT--TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSSSEEEEECGG
T ss_pred             ---HHHHHHHHh--cccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEechh
Confidence               445544322  24578899999999998643  25778899999999999999999989888777789999999974


Q ss_pred             C-------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          219 R-------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       219 ~-------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                      .       ...++...|++++||.+.||..|+..+++++|+++. .+++++++++++|++++
T Consensus       363 ~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l  424 (428)
T 1iay_A          363 LLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFV  424 (428)
T ss_dssp             GCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             hcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHH
Confidence            2       234667777777799999999887655789999986 69999999999998763

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=1.5e-36  Score=263.62  Aligned_cols=257  Identities=25%  Similarity=0.321  Sum_probs=209.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|.+++.++.+|++.     .++++++++++|+||||.+++.+++++|+++|++
T Consensus       126 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~  205 (406)
T 1xi9_A          126 DEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGE  205 (406)
T ss_dssp             CEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHH
Confidence            56677666555 777778888 9999999764567666443     2578999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCc-eEEEecCccccCCCccceeEEE--ecc----cccccCCcchHHHHHh
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREV-AIEISSFSKFSGFTGVRLGWTV--VPE----ELLFSSGFPVINDFNR  149 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~g~~g~r~G~~~--~~~----~~~~~~~~~~~~~~~~  149 (272)
                      +|+++|+||+|.++.+++...++..+.  .++ +++++|+||.+|++|+|+||++  +++    ++        ++.+..
T Consensus       206 ~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l--------~~~l~~  275 (406)
T 1xi9_A          206 YEIPVISDEIYDLMTYEGEHISPGSLT--KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEV--------REAIDR  275 (406)
T ss_dssp             HTCCEEEECTTTTCBSSSCCCCHHHHC--SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHH--------HHHHHH
T ss_pred             cCCEEEEEcCccccccCCCCCCHHHcC--CCceEEEEeccccccCCCccEEEEEEEecCchhHHHH--------HHHHHH
Confidence            999999999999988754445566663  566 8999999999998999999999  777    55        556655


Q ss_pred             hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC---CCChHHHH
Q 036024          150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP---GRKSWDVF  225 (272)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~---~~~~~~~~  225 (272)
                      ..... .+.+.+.|.++.++++.. .+++++++++++++++++.+.|+++ |+.+..+++++++|+.++   +.+..++.
T Consensus       276 ~~~~~-~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  353 (406)
T 1xi9_A          276 LARIR-LCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKNDKEFV  353 (406)
T ss_dssp             HHHHT-CCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSCSSHHHHH
T ss_pred             HHHhh-cCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCccCCCCHHHHH
Confidence            54444 568888999888888633 4557889999999999999999988 888887777889998887   34567777


Q ss_pred             HHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          226 AEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ..+++++||.+.||..|+..+.+++|+++..+++++++++++|++++
T Consensus       354 ~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~~l~~~l  400 (406)
T 1xi9_A          354 LDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFM  400 (406)
T ss_dssp             HHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            78875669999999988765578999999889999999999998753

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=3.3e-37  Score=266.85  Aligned_cols=250  Identities=14%  Similarity=0.163  Sum_probs=193.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-------CCCceEEEEecC-CCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-------TSRTDIIFFCSP-NNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-------~~~~~~i~~~~p-~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|++. |...++..| +++++|+..++++.+|++.       .++++++++++| |||||.+++.+++++|+++
T Consensus       123 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~  202 (405)
T 3k7y_A          123 ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEI  202 (405)
T ss_dssp             CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHH
T ss_pred             CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence            78889888888 888999999 9999999544467777543       245678888855 9999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCCC---CCccccCCCCCceEEEecCccccCCCccceeEEEe--c-ccccccCCcchHHHH
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCP---RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV--P-EELLFSSGFPVINDF  147 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~-~~~~~~~~~~~~~~~  147 (272)
                      |+++++++|+||+|.++.+++..   .++..+....+++++++||||+||++|+|+||+++  + ++...    ++...+
T Consensus       203 ~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~----~~~~~l  278 (405)
T 3k7y_A          203 VLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKK----IVFNNL  278 (405)
T ss_dssp             HHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHH----HHHHHH
T ss_pred             HHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHH----HHHHHH
Confidence            99999999999999998876421   12333333457899999999999999999999865  2 33310    112233


Q ss_pred             HhhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHH----hCC----CeEecCCCceEEEe
Q 036024          148 NRIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLA----SLG----IKVYGGINAPYVWA  214 (272)
Q Consensus       148 ~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~----~~g----~~~~~~~~~~~~~i  214 (272)
                      ..........++.++|.++..++.+..     .++++++++.++++++.+.+.|+    ++|    +++..+++|+|+|+
T Consensus       279 ~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~  358 (405)
T 3k7y_A          279 CFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFV  358 (405)
T ss_dssp             HHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEEC
T ss_pred             HHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEec
Confidence            333334444567889998888887532     25678888999999999999999    776    67888899999999


Q ss_pred             ecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          215 HFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       215 ~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      .++.    +++.+| +++||.+.||.          |||++. +++++++++++|++++
T Consensus       359 ~l~~----~~~~~L-~~~gV~v~p~~----------Ris~a~~~~~~i~~~~~~i~~~~  402 (405)
T 3k7y_A          359 PLLA----KIAEHL-KTHHIYIINNG----------RINVSGITKNNVDYIADKICLSL  402 (405)
T ss_dssp             GGGG----GGTTTT-TTTTEECCTTS----------EEEGGGCCTTHHHHHHHHHHHHH
T ss_pred             CCCH----HHHHHH-HHCCEeecCCC----------eEEEeccCHHHHHHHHHHHHHHH
Confidence            8863    445666 88899998842          999964 7899999999998763

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=2.6e-35  Score=256.02  Aligned_cols=257  Identities=22%  Similarity=0.251  Sum_probs=209.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcc-cC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFF-PD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~-~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. +...++..| +++.+|.++++++. ++ +++  .++++++++++|+||||.+++.+++++|+++|+++
T Consensus       127 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~  206 (409)
T 2gb3_A          127 DEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERH  206 (409)
T ss_dssp             CEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred             CEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHc
Confidence            56777766555 777788888 99999998644655 33 333  25789999999999999999999999999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++|+||+|.++.+++...++  +.+..+++++++|+||.+|++|+|+||+++++ ++        .+.+........ 
T Consensus       207 ~~~li~Dea~~~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l--------~~~l~~~~~~~~-  275 (409)
T 2gb3_A          207 GLFLIVDEVYSEIVFRGEFASA--LSIESDKVVVIDSVSKKFSACGARVGCLITRNEEL--------ISHAMKLAQGRL-  275 (409)
T ss_dssp             TCEEEEECTTTTCBCSSCCCCG--GGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHH--------HHHHHHHHHHSC-
T ss_pred             CCEEEEECcccccccCCCCCCc--cccCCCCEEEEecchhccCCccceEEEEEECcHHH--------HHHHHHHHhccC-
Confidence            9999999999988776543443  22234567999999999999999999999998 66        566665555444 


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-ecCCCceEEEeecCCCChHHHHHHHHHh----
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV-YGGINAPYVWAHFPGRKSWDVFAEILEK----  231 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~i~l~~~~~~~~~~~ll~~----  231 (272)
                      +.+.+.+.++.++++. ...++++++++++++++++.+.|+++|+.+ ..+.+++++|+.+++.+..++...|+++    
T Consensus       276 ~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  354 (409)
T 2gb3_A          276 APPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMD  354 (409)
T ss_dssp             CCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBT
T ss_pred             CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCCCeeEEEEEEeCCCCHHHHHHHHHhccccc
Confidence            6888999988888864 467788999999999999999999889888 7777889999999755667777888777    


Q ss_pred             -cCeEeeCCCCCCC---CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 -THITTVPGSGFGP---GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 -~gi~v~~g~~~~~---~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                       +||.+.||..|+.   .+.+++|+++..+++++++++++|++++
T Consensus       355 ~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~l  399 (409)
T 2gb3_A          355 GETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGL  399 (409)
T ss_dssp             TEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             cCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHH
Confidence             6999999998864   3468999999889999999999998753

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=1.2e-35  Score=257.01  Aligned_cols=255  Identities=21%  Similarity=0.300  Sum_probs=202.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...++..| +++.+|++++ ++.+|++.     .++++++++++||||||.+++.+++++|+++|++
T Consensus       125 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~  203 (398)
T 3ele_A          125 DEFITIAPYFPEYKVFVNAAGARLVEVPADTE-HFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEK  203 (398)
T ss_dssp             CEEEEESSCCTHHHHHHHHTTCEEEEECCCTT-TSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchhhHHHHHHcCCEEEEEecCCc-CCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHh
Confidence            77888777666 778888889 9999999865 66667443     2679999999999999999999999999999999


Q ss_pred             ------cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024           77 ------NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI  150 (272)
Q Consensus        77 ------~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~  150 (272)
                            +|+++|+||+|.++.+++...+..  ....+++++++|+||.+|++|+|+||++++++....  ..+...+...
T Consensus       204 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~--~~~~~~~~~~  279 (398)
T 3ele_A          204 KSKEIGRPIFIIADEPYREIVYDGIKVPFV--TKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDK--AELYAAVCGA  279 (398)
T ss_dssp             HHHHHTSCCEEEEECTTTTCBCTTCCCCCG--GGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTH--HHHHHHHHHH
T ss_pred             hhhccCCCeEEEEeccccccccCCCCcCCh--HhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhH--HHHHHHHHHH
Confidence                  999999999999988876433221  123467899999999999999999999999886320  1123333333


Q ss_pred             hhh-ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHH
Q 036024          151 ICT-CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEIL  229 (272)
Q Consensus       151 ~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll  229 (272)
                      ... ...+++.+.|.++.+++....      .+++++++++++.+.|+++|+.+..+++++++|+.++..+..++...+ 
T Consensus       280 ~~~~~~~~~~~~~~~a~~~~l~~~~------~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l-  352 (398)
T 3ele_A          280 GRALGYVCAPSLFQKMIVKCQGATG------DINAYKENRDLLYEGLTRIGYHCFKPDGAFYMFVKALEDDSNAFCEKA-  352 (398)
T ss_dssp             HHHTTCCCSCHHHHHHHTTCTTCCC------CHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECSSSCHHHHHHHH-
T ss_pred             hhhccccCCCHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHcCCeecCCCeeEEEEEEcCCCCHHHHHHHH-
Confidence            322 244577788888887776433      457888999999999998899999888889999999865666666655 


Q ss_pred             HhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          230 EKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +++||.+.||+.|+.  ++++|++++.+++++++++++|++++
T Consensus       353 ~~~gi~v~~g~~~~~--~~~iRis~~~~~e~i~~~l~~l~~~l  393 (398)
T 3ele_A          353 KEEDVLIVAADGFGC--PGWVRISYCVDREMIKHSMPAFEKIY  393 (398)
T ss_dssp             HTTTEECEESGGGTC--TTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             HHCCEEEeCccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            566999999998875  57999999889999999999998763

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=6.8e-36  Score=260.62  Aligned_cols=260  Identities=18%  Similarity=0.278  Sum_probs=216.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecC-CCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG-PGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~-~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..|.+. +...+...| +++.+|++ .++++.+|++.+      ++++++++++||||||.+++++++++|+++|
T Consensus       144 d~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~  223 (421)
T 3l8a_A          144 DAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELC  223 (421)
T ss_dssp             EEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHH
T ss_pred             CEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHH
Confidence            56776666555 777888888 99999987 455677775442      6899999999999999999999999999999


Q ss_pred             HHcCCEEEEcccCCccccCCC-CCCccccCC-CCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhh
Q 036024           75 RNNGSIIIFDSAYAAYVTDGC-PRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRII  151 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~  151 (272)
                      +++|+++|+||+|.++.+.+. ..++..+.. ..++++++.|+||.+|++|+|+||++++ +++        .+.+....
T Consensus       224 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l--------~~~~~~~~  295 (421)
T 3l8a_A          224 KKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESL--------RRKFQYRQ  295 (421)
T ss_dssp             HHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHH--------HHHHHHHH
T ss_pred             HHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHH--------HHHHHHHH
Confidence            999999999999999888764 345555532 3477899999999999899999999998 555        55665554


Q ss_pred             -hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC--CChHHHHHH
Q 036024          152 -CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG--RKSWDVFAE  227 (272)
Q Consensus       152 -~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~--~~~~~~~~~  227 (272)
                       .....+.+.+++.++.+++.. ..+++++.+++++++++++.+.|+++ ++.+..++++++.|++++.  .+..++...
T Consensus       296 ~~~~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l~~~  374 (421)
T 3l8a_A          296 LANNQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEK  374 (421)
T ss_dssp             HHTTCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHHHHH
T ss_pred             HhcccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHHHHH
Confidence             334446888999988888873 56778999999999999999999986 8999998889999999973  466788888


Q ss_pred             HHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      |++++||.+.||+.|+..+.+++|+++..+++++++++++|++++
T Consensus       375 l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l  419 (421)
T 3l8a_A          375 LQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVF  419 (421)
T ss_dssp             HHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred             HHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            888889999999999877789999999889999999999999875

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=100.00  E-value=6.8e-36  Score=256.65  Aligned_cols=254  Identities=20%  Similarity=0.296  Sum_probs=211.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|++++++|.+|++.     .+++++|++++||||||.+++.+++++|+++|++
T Consensus       106 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~  185 (375)
T 3op7_A          106 DHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASE  185 (375)
T ss_dssp             CEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            66777777666 777888889 9999999877788777554     2689999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      ||+++|+||+|..+.+.+ ..++...   .+++++++|+||.+|++|+|+||+++++++        .+.+.........
T Consensus       186 ~~~~li~De~~~~~~~~~-~~~~~~~---~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l--------~~~~~~~~~~~~~  253 (375)
T 3op7_A          186 VGAYILSDEVYRSFSELD-VPSIIEV---YDKGIAVNSLSKTYSLPGIRIGWVAANHQV--------TDILRDYRDYTMI  253 (375)
T ss_dssp             TTCEEEEECCSCCCSSSC-CCCHHHH---CTTEEEEEESSSSSSCGGGCCEEEECCHHH--------HHHHTTTGGGTTS
T ss_pred             cCCEEEEEcccccccccC-CCchhhh---cCCEEEEeEChhhcCCcccceEEEEeCHHH--------HHHHHHHHhhhcc
Confidence            999999999999877652 2233332   456799999999999999999999997777        6677766666666


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC-CCChHHHHHHHHHhcCe
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP-GRKSWDVFAEILEKTHI  234 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll~~~gi  234 (272)
                      +++.+.+.++...+. ...+++++.++.++++++.+.+.|++. ++.+..+.+++++|+.++ +.+..+++.++++++||
T Consensus       254 ~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi  332 (375)
T 3op7_A          254 CAGVFDDLVAQLALA-HYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGV  332 (375)
T ss_dssp             CCCHHHHHHHHHHHH-THHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCE
T ss_pred             CCCcHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCE
Confidence            678888888888777 344677888999999999999999987 788888888888999887 44667888888877799


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+.||+.|+.  .+++|+++..+.+++++++++|++++
T Consensus       333 ~v~~g~~~~~--~~~iRi~~~~~~~~i~~~l~~l~~~l  368 (375)
T 3op7_A          333 LLVPGNRFER--DGYVRLGFACEQETLIKGLEKLSQFL  368 (375)
T ss_dssp             ECEEGGGGTC--TTEEEECCCSCHHHHHHHHHHHHHHH
T ss_pred             EEeChhhhCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            9999998875  68999999888899999999998763

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=1.3e-35  Score=254.45  Aligned_cols=251  Identities=25%  Similarity=0.402  Sum_probs=204.6

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      |.|++..|.+. +...++..| +++.+|.+.+ .    +++  .++++++++++||||||.+++.+    |+++|+++|+
T Consensus       114 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~d~~-~----l~~~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~  184 (370)
T 2z61_A          114 DEVLIQNPCYPCYKNFIRFLGAKPVFCDFTVE-S----LEEALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIP  184 (370)
T ss_dssp             CEEEEESSCCTHHHHHHHHTTCEEEEECSSHH-H----HHHHCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCS
T ss_pred             CEEEEeCCCchhHHHHHHHcCCEEEEeCCCHH-H----HHHhcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCC
Confidence            56777766655 777788888 8888882211 1    221  24789999999999999999966    9999999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcc
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS  159 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (272)
                      ++|+||+|.++.+++.+.++..+.+..+++++++|+||.+|++|+|+||+++++++        .+.+.........+.+
T Consensus       185 ~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~~~~~~~~~~~~~~  256 (370)
T 2z61_A          185 YIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEI--------IEAILKLQQNLFISAP  256 (370)
T ss_dssp             EEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHH--------HHHHHHHHHHHTSSSC
T ss_pred             EEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHH--------HHHHHHHHhhcccCCC
Confidence            99999999998877655566666445577899999999999899999999999877        6666666655555688


Q ss_pred             hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCC
Q 036024          160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPG  239 (272)
Q Consensus       160 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g  239 (272)
                      .+.|.++.++++....+++++.+++++++++++.+.|+++|+++..+++++++|+.++. +..++...|++++||.+.||
T Consensus       257 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g  335 (370)
T 2z61_A          257 TISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIGE-DGREFAYKLLKEKFVALTPG  335 (370)
T ss_dssp             HHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCCBTTEECCBCSS-CHHHHHHHHHHHHCEECEEG
T ss_pred             HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCcceEEEEecCC-CHHHHHHHHHHhCCEEEeCc
Confidence            99999888888741356788999999999999999999989888887788999999986 66777788875669999999


Q ss_pred             CCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          240 SGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       240 ~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +.|+..+.+++|+++..+++++++++++|++++
T Consensus       336 ~~f~~~~~~~~Ri~~~~~~~~i~~~~~~l~~~l  368 (370)
T 2z61_A          336 IGFGSKGKNYIRISYANSYENIKEGLERIKEFL  368 (370)
T ss_dssp             GGGCGGGSSBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             hhhCCCCCCEEEEEEeCCHHHHHHHHHHHHHHH
Confidence            988754578999999889999999999998763

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=100.00  E-value=9.8e-36  Score=260.27  Aligned_cols=254  Identities=13%  Similarity=0.138  Sum_probs=205.7

Q ss_pred             cccccccCccc-chHHhcc-cc-eeEEeecCCCCCcccCCCCC-----C---CceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGK-YC-NIEYLECGPGNNFFPDLKGT-----S---RTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~-~g-~~~~~~~~~~~~~~~dl~~~-----~---~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..|.+. +...++. .| +++.+|+++++ +.+|++.+     +   +++++++++||||||.+++.+++++|++
T Consensus       138 d~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  216 (430)
T 2x5f_A          138 DTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVE  216 (430)
T ss_dssp             CEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred             CEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHH
Confidence            66777776665 7788888 88 99999987643 55564442     2   7899999999999999999999999999


Q ss_pred             HHHH-----cCCEEEEcccCCccccCCC-CCCcc-ccCCCCCc---eEEEecCccccCCCccceeEEEe---cccccccC
Q 036024           73 FARN-----NGSIIIFDSAYAAYVTDGC-PRSIY-EIPGAREV---AIEISSFSKFSGFTGVRLGWTVV---PEELLFSS  139 (272)
Q Consensus        73 ~~~~-----~~~~vi~D~~~~~~~~~~~-~~~~~-~~~~~~~~---~i~~~s~sK~~g~~g~r~G~~~~---~~~~~~~~  139 (272)
                      +|++     +|+++|+||+|.++.+++. ..++. .+.+..++   +++++|+||.+|++|+|+||+++   ++++    
T Consensus       217 ~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~----  292 (430)
T 2x5f_A          217 AIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTT----  292 (430)
T ss_dssp             HHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHH----
T ss_pred             HHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHH----
Confidence            9999     9999999999999887654 33444 55433566   89999999999989999999999   7766    


Q ss_pred             CcchHHHHHhhhhh----ccCCcchHHHHHHHHhcc-cccH-HHHHHHHHHHHHHHHHHHHHHH----hCCCeEecCCCc
Q 036024          140 GFPVINDFNRIICT----CFNGASNIAQAGGLACLS-SEGL-EAVHSVVDYYKENTKILIDTLA----SLGIKVYGGINA  209 (272)
Q Consensus       140 ~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~l~-~~~~-~~~~~~~~~~~~~~~~l~~~L~----~~g~~~~~~~~~  209 (272)
                          .+.+......    ...+++.+.|.++.++++ +..+ +++++.+++++++++.+.+.|+    +.|+++..++++
T Consensus       293 ----~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g  368 (430)
T 2x5f_A          293 ----KEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSG  368 (430)
T ss_dssp             ----HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCCBS
T ss_pred             ----HHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCCce
Confidence                5555554443    556689999999999997 6522 4455699999999999999998    668888888788


Q ss_pred             eEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          210 PYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       210 ~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                      +++|+.+++.+..++...|++++||.+.||      +++++|+++. .+++++++++++|++++
T Consensus       369 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g------~~~~iRis~~~~~~e~i~~~~~~l~~~l  426 (430)
T 2x5f_A          369 YFMAIKVHDVDPEALRKHLIDKYSIGVIAL------NATDIRIAFSCVEKDDIPHVFDSIAKAI  426 (430)
T ss_dssp             SEEEEEESSSCHHHHHHHHHHHHCEECEEC------SSSEEEEEGGGSCGGGHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCCHHHHHHHHHHhCCEEEecC------CCCeEEEEEecCCHHHHHHHHHHHHHHH
Confidence            899999985566778888887569999997      3679999987 78999999999998763

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=9.2e-36  Score=260.78  Aligned_cols=264  Identities=18%  Similarity=0.150  Sum_probs=209.3

Q ss_pred             ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      .|++..|.+. +...++..| +++.+++++ .++.+|++.      .++++++++++||||||.+++.+++++|+++|++
T Consensus       135 ~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~  213 (437)
T 3g0t_A          135 GTLFIDPGFNLNKLQCRILGQKFESFDLFE-YRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATK  213 (437)
T ss_dssp             CEEEEESCCHHHHHHHHHHTCCCEEEEGGG-GCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             EEEEeCCCcHhHHHHHHHcCCEEEEEeecC-CCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHH
Confidence            6777766665 778888889 999999984 366666332      3688999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCc-------cccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHH---
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSI-------YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND---  146 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~---  146 (272)
                      +|+++|+||+|+++.+++ ..++       ..+.+..+++++++|+||.+|++|+|+||++++++++.+....+...   
T Consensus       214 ~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  292 (437)
T 3g0t_A          214 HDVIVIEDLAYFGMDFRK-DYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGR  292 (437)
T ss_dssp             TTCEEEEECTTTTCCTTS-CCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSC
T ss_pred             CCcEEEEEcchhhcccCC-CcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhhhhcccccccc
Confidence            999999999999877763 2233       44443467889999999999999999999999987732000000000   


Q ss_pred             -------HHhhhhhccCCcchHHHHHHHHhccccc--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEe------cC-CCce
Q 036024          147 -------FNRIICTCFNGASNIAQAGGLACLSSEG--LEAVHSVVDYYKENTKILIDTLASLGIKVY------GG-INAP  210 (272)
Q Consensus       147 -------~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~------~~-~~~~  210 (272)
                             +.........+.+.+++.++.+++....  ..++++.+++++++++.+.+.|+++|+.+.      .+ .+++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~  372 (437)
T 3g0t_A          293 LRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGF  372 (437)
T ss_dssp             SBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSS
T ss_pred             cchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeE
Confidence                   5444555556688999999999887432  122789999999999999999999999888      34 7899


Q ss_pred             EEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHh
Q 036024          211 YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEAL  271 (272)
Q Consensus       211 ~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~  271 (272)
                      ++|+.+++.+..++...|.++ ||.+.|+..|+...++++|+++.. +++++++++++|+++
T Consensus       373 ~~~~~~~~~~~~~l~~~L~~~-gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~  433 (437)
T 3g0t_A          373 YFTVGYKGMDSSKLIEKFVRY-GMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQML  433 (437)
T ss_dssp             EEEEEETTCCHHHHHHHHHHT-TEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHH
T ss_pred             EEEEecCCCCHHHHHHHHHHc-CeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHH
Confidence            999999866777888887766 999999999876555889999865 899999999999875

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=2.3e-35  Score=253.93  Aligned_cols=254  Identities=24%  Similarity=0.323  Sum_probs=206.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecC--CCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECG--PGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~--~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.+. +...++..| +++.+|.+  ++ ++.+|++.     .++++++++++|+||||.+++.+++++|+++|
T Consensus       103 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~  181 (381)
T 1v2d_A          103 DEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLA  181 (381)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECEEETT-EEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred             CEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCc-cCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHH
Confidence            55666666555 777788888 99999986  33 34555332     26789999999999999999999999999999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +++|+++|+||+|.++.++..+.++..+  ..+++++++|+||.+|++|+|+||+++++++        ++.+.......
T Consensus       182 ~~~~~~li~De~~~~~~~g~~~~~~~~~--~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~~~~~~~~~  251 (381)
T 1v2d_A          182 RAHDLFLISDEVYDELYYGERPRRLREF--APERTFTVGSAGKRLEATGYRVGWIVGPKEF--------MPRLAGMRQWT  251 (381)
T ss_dssp             HHTTCEEEEECTTTTCBSSSCCCCHHHH--CTTTEEEEEEHHHHTTCGGGCCEEEECCTTT--------HHHHHHHHHHH
T ss_pred             HHcCCEEEEEcCccccccCCCCCCHHHh--cCCCEEEEeechhhcCCcccceEEEEeCHHH--------HHHHHHHHhhc
Confidence            9999999999999988773334455554  3467899999999999899999999998877        56666555544


Q ss_pred             cCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcC
Q 036024          155 FNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTH  233 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~g  233 (272)
                      ..+.+.+.|.++.+++.... .+++++.+++++++++++.+.|++.|+++..+++++++|+.++..+    +.++++++|
T Consensus       252 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~----~~~~l~~~g  327 (381)
T 1v2d_A          252 SFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGWD----AFRLVEEAR  327 (381)
T ss_dssp             TSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTCC----HHHHHHHTC
T ss_pred             ccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCcceEEEEecChHh----HHHHHHhCC
Confidence            55678889988888887432 3577889999999999999999999999988877899999998542    566677779


Q ss_pred             eEeeCCCCCCC--CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          234 ITTVPGSGFGP--GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       234 i~v~~g~~~~~--~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      |.+.||..|+.  .+.+++|+++..+++++++++++|++++
T Consensus       328 i~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~~~~~l~~~l  368 (381)
T 1v2d_A          328 VALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVV  368 (381)
T ss_dssp             EECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred             EEEecchHhCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHH
Confidence            99999998874  3468999999779999999999998864

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=2.1e-35  Score=257.01  Aligned_cols=261  Identities=20%  Similarity=0.315  Sum_probs=206.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|++++.++.+|++.     .++++++++++|+||||.+++.+++++|+++|++
T Consensus       129 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  208 (416)
T 1bw0_A          129 DYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEE  208 (416)
T ss_dssp             CEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHH
Confidence            56777776665 888888889 9999998766566667443     2578899999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-----CCCccccCCCCCceEEEecCccccCCCccceeEEEeccc--ccccCCcchHHHHHh
Q 036024           77 NGSIIIFDSAYAAYVTDGC-----PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE--LLFSSGFPVINDFNR  149 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~--~~~~~~~~~~~~~~~  149 (272)
                      +|+++|+||+|.++.+++.     ..++..+. ..+++++++|+||.++++|+|+||++++++  .+.    .+...+..
T Consensus       209 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~----~~~~~~~~  283 (416)
T 1bw0_A          209 LRLPLFSDEIYAGMVFKGKDPNATFTSVADFE-TTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGP----SFLEGLKR  283 (416)
T ss_dssp             HTCCEEEECTTTTCBCCSSCTTCCCCCTTSSC-CSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCH----HHHHHHHH
T ss_pred             cCCEEEEEccccccccCCCCCCCCccCHHHcc-CCCcEEEEecchhhCCCCCceEEEEEeeCchhhHH----HHHHHHHH
Confidence            9999999999999877653     23444432 234679999999999889999999999875  311    11222222


Q ss_pred             hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCC------CChH
Q 036024          150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPG------RKSW  222 (272)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~------~~~~  222 (272)
                      .. ....+.+.+.|.++.++++.....++++.+++++++++++.+.|+++ |+.+..+.+++++|+.++.      .+..
T Consensus       284 ~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (416)
T 1bw0_A          284 VG-MLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDV  362 (416)
T ss_dssp             HH-HHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGGBSSCCSHH
T ss_pred             Hh-ccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHHcCCCCCHH
Confidence            21 12345888999999999875456778899999999999999999988 8888877789999998862      3566


Q ss_pred             HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++...+++++||.+.||+.|+.  ++++|+++..+++++++++++|++++
T Consensus       363 ~~~~~l~~~~gi~v~~g~~f~~--~~~iRis~~~~~e~l~~~l~~l~~~l  410 (416)
T 1bw0_A          363 EFFEKLLEEENVQVLPGTIFHA--PGFTRLTTTRPVEVYREAVERIKAFC  410 (416)
T ss_dssp             HHHHHHHHHHCEECEEGGGGTC--TTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCEEEecccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            7777787677999999998864  57999999888999999999998763

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=9.7e-36  Score=257.69  Aligned_cols=260  Identities=16%  Similarity=0.195  Sum_probs=208.6

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCC-CCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGP-GNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~-~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..|.+. +...+...| +++.+|.++ +++|.+|++.      .++++++++++||||||.+++.+++++|+++|
T Consensus       114 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~  193 (399)
T 1c7n_A          114 DGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIV  193 (399)
T ss_dssp             CEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHH
T ss_pred             CEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHH
Confidence            56777776655 777888888 999999863 3345566433      16789999999999999999999999999999


Q ss_pred             HHcCCEEEEcccCCccccCCC-CCCccccCC-CCCceEEEecCccccCCCccceeEEEeccc-ccccCCcchHHHHHhhh
Q 036024           75 RNNGSIIIFDSAYAAYVTDGC-PRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPEE-LLFSSGFPVINDFNRII  151 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-~~~~~~~~~~~~~~~~~  151 (272)
                      +++|+++|+||+|.++.+++. ..++..+.. ..+++++++|+||.+|++|+|+||++++++ +        .+.+....
T Consensus       194 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--------~~~l~~~~  265 (399)
T 1c7n_A          194 LKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDI--------RERFTKSR  265 (399)
T ss_dssp             HHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHH--------HHHHHHHH
T ss_pred             HHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHH--------HHHHHHHH
Confidence            999999999999999887653 344544421 136789999999999999999999999754 5        55665555


Q ss_pred             hhcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCCceEEEeecCC--CChHHHHH
Q 036024          152 CTCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGINAPYVWAHFPG--RKSWDVFA  226 (272)
Q Consensus       152 ~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~i~l~~--~~~~~~~~  226 (272)
                      .... .+.+.+++.++.+++... .+++++.+++++++++++.+.|++ + |+.+..+.+++++|+.++.  .+..++..
T Consensus       266 ~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (399)
T 1c7n_A          266 DATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKAMEE  344 (399)
T ss_dssp             HHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHHHHH
T ss_pred             hhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCCCHHHHHH
Confidence            4432 357888999888888743 577899999999999999999998 6 8888888788888999973  46677777


Q ss_pred             HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .|++++||.+.||+.|++.+++++|+++..+++++++++++|++++
T Consensus       345 ~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l  390 (399)
T 1c7n_A          345 FMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKAL  390 (399)
T ss_dssp             HHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHH
Confidence            7776779999999998765678999999888899999999998753

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=2.2e-34  Score=245.85  Aligned_cols=251  Identities=17%  Similarity=0.264  Sum_probs=202.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC-CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      |.|++..|.+. +...++..| +++.+|+++++++.++ +++ ..+++++++++||||||.+++.+++++|+++|+++|+
T Consensus        99 d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~  178 (361)
T 3ftb_A           99 EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKK  178 (361)
T ss_dssp             SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTTCSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred             CcEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCC
Confidence            67777776665 778888889 9999999987777764 322 2228999999999999999999999999999999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEE-ecccccccCCcchHHHHHhhhhhccCCc
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTV-VPEELLFSSGFPVINDFNRIICTCFNGA  158 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (272)
                      ++|+||+|.++.++ ...+.....+..+++++++|+||.+|++|+|+||++ .++++        .+.+.....  ..+.
T Consensus       179 ~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~--------~~~~~~~~~--~~~~  247 (361)
T 3ftb_A          179 TIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEI--------AAKIKAKQN--PWNI  247 (361)
T ss_dssp             EEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHH--------HHHHHTTSC--TTCS
T ss_pred             EEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHH--------HHHHHhhCC--CCCC
Confidence            99999999988876 444555554556788999999999999999999998 66666        556655444  3458


Q ss_pred             chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024          159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT  236 (272)
Q Consensus       159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v  236 (272)
                      +.+++.++.+++++  .+++++.+++++++++++.+.|+++ ++. +.++ .+.++|+.+++.+..++...|.++ ||.+
T Consensus       248 ~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~-gi~v  323 (361)
T 3ftb_A          248 NCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSP-HANFVLCRLENISGEKLYDSLLKE-DIVI  323 (361)
T ss_dssp             CHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECC-SSSEEEEEESSSCHHHHHHHHHTT-TEEC
T ss_pred             CHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCC-CCeEEEEEcCCCCHHHHHHHHHHC-CeEE
Confidence            88999999999984  4778999999999999999999998 787 6664 677899999875677777777776 9999


Q ss_pred             eCCCCCCCCCCCeEEEEccCCHHH---HHHHHHHHHH
Q 036024          237 VPGSGFGPGGEEYIRISGFGHRES---ILEASRRLEA  270 (272)
Q Consensus       237 ~~g~~~~~~~~~~~R~s~~~~~~~---i~~~l~~l~~  270 (272)
                      .||+.|+..+++++|+++. ++++   +.++++++.+
T Consensus       324 ~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~  359 (361)
T 3ftb_A          324 RRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVEN  359 (361)
T ss_dssp             EECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHH
T ss_pred             eeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence            9999998777899999986 4444   5555555444

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=100.00  E-value=1.8e-34  Score=246.28  Aligned_cols=247  Identities=22%  Similarity=0.274  Sum_probs=195.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..|.+. |...++..| +++.+|+++  ++.+|++.    ..+++++++++||||||.+++.+++++|+++|+ +
T Consensus       101 d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~  177 (356)
T 1fg7_A          101 DAILYCPPTYGMYSVSAETIGVECRTVPTLD--NWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTR-G  177 (356)
T ss_dssp             CEEEECSSSCTHHHHHHHHHTCEEEECCCCT--TSCCCHHHHHTSCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-T
T ss_pred             CEEEEeCCChHHHHHHHHHcCCEEEEeeCCC--CCCCCHHHHHHHhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-C
Confidence            67788776665 888888888 999999874  34455332    237899999999999999999999999999999 9


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG  157 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (272)
                      ++++|+||+|.++..   ..++..+....+++++++|+||.+|++|+|+||+++++++        ++.+......  .+
T Consensus       178 ~~~li~De~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~l~~~~~~--~~  244 (356)
T 1fg7_A          178 KAIVVADEAYIEFCP---QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV--------INLLMKVIAP--YP  244 (356)
T ss_dssp             TCEEEEECTTGGGSG---GGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHH--------HHHHHHHSCS--SC
T ss_pred             CCEEEEEccchhhcC---CCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHH--------HHHHHHhcCC--CC
Confidence            999999999998762   1233333333467899999999999999999999998877        5556544332  35


Q ss_pred             cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024          158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT  236 (272)
Q Consensus       158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v  236 (272)
                      .+.++|.++.+++.+...+++++.+++++++++++.+.|++++ +....+.+++|+|+.++  +..++...| .++||.+
T Consensus       245 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~L-~~~gI~v  321 (356)
T 1fg7_A          245 LSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK--ASSAVFKSL-WDQGIIL  321 (356)
T ss_dssp             SCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET--THHHHHHHH-HHTTEEC
T ss_pred             CCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC--CHHHHHHHH-HHCCEEE
Confidence            8889999999999854444588999999999999999999986 22334457899999997  556677777 5669999


Q ss_pred             eC-CCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          237 VP-GSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       237 ~~-g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+ |..|+.  .+++|+++. +++++++++++|++++
T Consensus       322 ~~~g~~~~~--~~~iRis~~-~~~e~~~~~~~l~~~~  355 (356)
T 1fg7_A          322 RDQNKQPSL--SGCLRITVG-TREESQRVIDALRAEQ  355 (356)
T ss_dssp             EECTTSTTC--TTEEEEECC-CHHHHHHHHHHHHTCC
T ss_pred             EECCCCCCC--CCeEEEEeC-CHHHHHHHHHHHHhhc
Confidence            99 887764  469999986 6889999999998763

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.6e-35  Score=258.75  Aligned_cols=259  Identities=12%  Similarity=0.085  Sum_probs=207.2

Q ss_pred             ccccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC---CCCceEEEEe-cCCCccccCCCHHHHHHHHHHH-
Q 036024            3 IDSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG---TSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFA-   74 (272)
Q Consensus         3 ~d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~---~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~-   74 (272)
                      -|.|++..|.+. |...++..| +++++|++++ ++.+| +++   .+++++++++ +||||||.+++.+++++|+++| 
T Consensus       133 gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~  211 (427)
T 3ppl_A          133 TVKWICPVPGYDRHFSITERFGFEMISVPMNED-GPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMET  211 (427)
T ss_dssp             CCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT-EECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCC
T ss_pred             CCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC-CCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHh
Confidence            377888888777 888888999 9999999865 44443 322   2678999877 8899999999999999999999 


Q ss_pred             HHcCCEEEEcccCCccccCCCCC---Ccccc---CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPR---SIYEI---PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN  148 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~---~~~~~---~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~  148 (272)
                      +++|+++|+||+|.++.+++.+.   ++..+   .+..+++++++||||. +++|+|+||+++++++        ++.+.
T Consensus       212 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G~r~G~~~~~~~l--------~~~~~  282 (427)
T 3ppl_A          212 AAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAGAGVSFFLTSAEN--------RKWYT  282 (427)
T ss_dssp             SSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTTSSCEEEECCHHH--------HHHHH
T ss_pred             hcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-cCcCccEEEEEcCHHH--------HHHHH
Confidence            99999999999999877765432   33333   2356789999999999 5699999999999887        67777


Q ss_pred             hhhhhccCCcchHHHHHHHHhccc-cc-HHHHHHHHHHHHHHHHHHHHHHHh----C-CCeEecCCCceEEEeecCCCCh
Q 036024          149 RIICTCFNGASNIAQAGGLACLSS-EG-LEAVHSVVDYYKENTKILIDTLAS----L-GIKVYGGINAPYVWAHFPGRKS  221 (272)
Q Consensus       149 ~~~~~~~~~~~~~~~~a~~~~l~~-~~-~~~~~~~~~~~~~~~~~l~~~L~~----~-g~~~~~~~~~~~~~i~l~~~~~  221 (272)
                      ........+++.+.|.++.+++.. .. .+++++.++.++++++.+.+.|.+    + ++.+..+++|+|+|+.++..+.
T Consensus       283 ~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~  362 (427)
T 3ppl_A          283 GHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPGTA  362 (427)
T ss_dssp             HHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTTCH
T ss_pred             HHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcchH
Confidence            777666777899999999999986 22 377889999999999999888865    2 5778788899999999986555


Q ss_pred             HHHHHHHHHhcCeEeeC-CCCCCC---CCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          222 WDVFAEILEKTHITTVP-GSGFGP---GGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       222 ~~~~~~ll~~~gi~v~~-g~~~~~---~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      .++.. +++++||.+.| |..|+.   .+++++|+++.. +++++++++++|++++
T Consensus       363 ~~~~~-~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l  417 (427)
T 3ppl_A          363 SRVAE-LAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCV  417 (427)
T ss_dssp             HHHHH-HHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHH
Confidence            55554 55666999999 555542   357899999866 7899999999998763

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=100.00  E-value=1.2e-35  Score=266.10  Aligned_cols=261  Identities=20%  Similarity=0.253  Sum_probs=196.3

Q ss_pred             cccccccCccc-chHH--hcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDE--VGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~--~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..|++. |...  +...| ++++++.+++++|.+|++.+     ++++++++++||||||.+++.+++++|+++|
T Consensus       195 d~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a  274 (546)
T 2zy4_A          195 DKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIV  274 (546)
T ss_dssp             CEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHH
T ss_pred             CEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHH
Confidence            56788877766 6654  34456 89999998887888885442     6789999999999999999999999999999


Q ss_pred             --HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccc-ccccCCcc--------h
Q 036024           75 --RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE-LLFSSGFP--------V  143 (272)
Q Consensus        75 --~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-~~~~~~~~--------~  143 (272)
                        ++++++||+||+|.++.++  +.++...  ..+++++++||||.+|++|+|+||++++++ ++......        +
T Consensus       275 ~~~~~~~~ii~De~y~~~~~~--~~s~~~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l  350 (546)
T 2zy4_A          275 AEHRPDLMILTDDVYGTFADD--FQSLFAI--CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVAL  350 (546)
T ss_dssp             HHTCTTCEEEEECTTGGGSTT--CCCHHHH--CGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHH
T ss_pred             HhccCCcEEEEeCcchhhccc--CcCHHHh--CCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHH
Confidence              7889999999999988753  4455444  246889999999999999999999999886 42110000        0


Q ss_pred             HHHHHh--------------------hhhhccCCcchHHHHHH-----HHhcccccHHHHHHHHHHHHHHHHHHHHHHHh
Q 036024          144 INDFNR--------------------IICTCFNGASNIAQAGG-----LACLSSEGLEAVHSVVDYYKENTKILIDTLAS  198 (272)
Q Consensus       144 ~~~~~~--------------------~~~~~~~~~~~~~~~a~-----~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~  198 (272)
                      ...+..                    .......+.+.+.|.++     .+++. ....+.+++++.++++++.+.+.|. 
T Consensus       351 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~-~~~~~~~~~r~~~~~r~~~l~~~L~-  428 (546)
T 2zy4_A          351 DHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMD-EADEYKHTLKQLIRRRETTLYRELG-  428 (546)
T ss_dssp             HHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHHGGGT-
T ss_pred             HHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            000110                    00122335677777753     23444 3357788999999999999999996 


Q ss_pred             CCCeEecCCCceEEEeecCC-----------------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHH
Q 036024          199 LGIKVYGGINAPYVWAHFPG-----------------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRES  260 (272)
Q Consensus       199 ~g~~~~~~~~~~~~~i~l~~-----------------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~  260 (272)
                      .++.+.++++++|+|++++.                 .++.+.+.++++++||.+.||+.|+. +.+++|+++.. ++++
T Consensus       429 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~-~~~~iRis~~~~~~e~  507 (546)
T 2zy4_A          429 MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGS-NRPSGRASLANLNEYE  507 (546)
T ss_dssp             SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTC-SSCEEEEESSSSCHHH
T ss_pred             CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCC-CCCeEEEEeccCCHHH
Confidence            56666677889999999852                 13455667778888999999999986 46889999876 8889


Q ss_pred             HHHHHHHHHHh
Q 036024          261 ILEASRRLEAL  271 (272)
Q Consensus       261 i~~~l~~l~~~  271 (272)
                      +++++++|+++
T Consensus       508 i~~~~~~l~~~  518 (546)
T 2zy4_A          508 YAAIGRALRKM  518 (546)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999999875

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=100.00  E-value=1.6e-35  Score=265.20  Aligned_cols=263  Identities=19%  Similarity=0.184  Sum_probs=207.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCC--CCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGP--GNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~--~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..|.+. |...+...| +++.++++.  +.++.+|++.     .++++++++++||||||.+++.+++++|+++|
T Consensus       194 d~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la  273 (533)
T 3f6t_A          194 DKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAV  273 (533)
T ss_dssp             CEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHH
T ss_pred             CEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHH
Confidence            66777777666 777777788 899998875  5567777544     26899999999999999999999999999999


Q ss_pred             H-HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccc-----ccccCC--------
Q 036024           75 R-NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE-----LLFSSG--------  140 (272)
Q Consensus        75 ~-~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-----~~~~~~--------  140 (272)
                      + ++++++|+||+|.++.++  ..++...  ..+++++++||||.+|++|+|+||++++++     ++....        
T Consensus       274 ~~~~~~~li~De~y~~~~~~--~~~~~~~--~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~  349 (533)
T 3f6t_A          274 EKNPKLMIISDEVYGAFVPN--FKSIYSV--VPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLH  349 (533)
T ss_dssp             HHCTTCEEEEECTTGGGSTT--CCCHHHH--SGGGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHH
T ss_pred             HhCCCCEEEEcCCccccccC--ccCHhhc--CCCCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHH
Confidence            9 689999999999987764  3344444  347889999999999999999999999887     211100        


Q ss_pred             ----------------cchHHHHHhhhhhccCCcchHHHHH----HHHhcc-----cccHHHHHHHHHHHHHHHHHHHHH
Q 036024          141 ----------------FPVINDFNRIICTCFNGASNIAQAG----GLACLS-----SEGLEAVHSVVDYYKENTKILIDT  195 (272)
Q Consensus       141 ----------------~~~~~~~~~~~~~~~~~~~~~~~~a----~~~~l~-----~~~~~~~~~~~~~~~~~~~~l~~~  195 (272)
                                      .++.+.+.........+++.+.|.+    +...+.     ....++++++++.++++++.+.+.
T Consensus       350 ~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~  429 (533)
T 3f6t_A          350 KRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDA  429 (533)
T ss_dssp             HHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHh
Confidence                            0011222334445556678888887    445554     234578899999999999999999


Q ss_pred             HHhCCCeEecCCCceEEEeecCC-----------------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-C
Q 036024          196 LASLGIKVYGGINAPYVWAHFPG-----------------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-H  257 (272)
Q Consensus       196 L~~~g~~~~~~~~~~~~~i~l~~-----------------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~  257 (272)
                      |. .++.+..+++++|+|+.++.                 .++.+++.++++++||.+.||+.|+. +.+++|+|++. +
T Consensus       430 L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~-~~~~iRls~a~~~  507 (533)
T 3f6t_A          430 MQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGA-KPGELRVSQANLP  507 (533)
T ss_dssp             HT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECS-STTEEEEESSSSC
T ss_pred             cC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCC-CCCEEEEEEeeCC
Confidence            98 88888888899999999863                 35668888899888999999999986 36899999974 8


Q ss_pred             HHHHHHHHHHHHHhC
Q 036024          258 RESILEASRRLEALF  272 (272)
Q Consensus       258 ~~~i~~~l~~l~~~l  272 (272)
                      ++++++++++|++++
T Consensus       508 ~e~i~~~i~~L~~~l  522 (533)
T 3f6t_A          508 TEDYALIGKQVLELL  522 (533)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998763

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=100.00  E-value=3.8e-35  Score=255.99  Aligned_cols=256  Identities=14%  Similarity=0.100  Sum_probs=199.5

Q ss_pred             ccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--C-CCceEEE-EecCCCccccCCCHHHHHHHHHHHH-H
Q 036024            5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--T-SRTDIIF-FCSPNNPTGHAATQNQLEQLVEFAR-N   76 (272)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~-~~~~~i~-~~~p~nptG~~~~~~~l~~l~~~~~-~   76 (272)
                      .|++..|.+. |...++..| +++++|++++ ++.+| +++  . +++++++ +++||||||.+++.+++++|+++|+ +
T Consensus       133 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~  211 (422)
T 3d6k_A          133 KWLCPVPGYDRHFTITEHFGFEMINVPMTDE-GPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAA  211 (422)
T ss_dssp             EEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSS
T ss_pred             EEEEeCCccHHHHHHHHHcCCEEEecCCCCC-CCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhc
Confidence            4777777666 888888889 9999999865 44333 222  1 3788888 5699999999999999999999999 9


Q ss_pred             cCCEEEEcccCCc--cccCCC-CCCcccc---CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024           77 NGSIIIFDSAYAA--YVTDGC-PRSIYEI---PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI  150 (272)
Q Consensus        77 ~~~~vi~D~~~~~--~~~~~~-~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~  150 (272)
                      +|+++|+||+|.+  +..++. ..++..+   .+..+++++++||||. +.||+|+||+++++++        ++.+...
T Consensus       212 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~~~l--------~~~l~~~  282 (422)
T 3d6k_A          212 PDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASSKEN--------IEWYASH  282 (422)
T ss_dssp             TTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECCHHH--------HHHHHHH
T ss_pred             cCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeCHHH--------HHHHHHH
Confidence            9999999999985  443321 2344222   2345789999999999 5699999999999877        6677776


Q ss_pred             hhhccCCcchHHHHHHHHhccccc--HHHHHHHHHHHHHHHHHHHHHHHh----CC-CeEecCCCceEEEeecCCCChHH
Q 036024          151 ICTCFNGASNIAQAGGLACLSSEG--LEAVHSVVDYYKENTKILIDTLAS----LG-IKVYGGINAPYVWAHFPGRKSWD  223 (272)
Q Consensus       151 ~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~----~g-~~~~~~~~~~~~~i~l~~~~~~~  223 (272)
                      ......+++.++|.++.+++.+.+  .+++++.++.++++++.+.+.|.+    +| +.+..+++|+|+|+.++..+. +
T Consensus       283 ~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~-~  361 (422)
T 3d6k_A          283 ANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTA-S  361 (422)
T ss_dssp             HHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTTCH-H
T ss_pred             HHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCCCH-H
Confidence            666666789999999999998622  367888999999999988888865    33 677777889999999985444 4


Q ss_pred             HHHHHHHhcCeEeeC-CCCCC--C-CCCCeEEEEcc-CCHHHHHHHHHHHHHh
Q 036024          224 VFAEILEKTHITTVP-GSGFG--P-GGEEYIRISGF-GHRESILEASRRLEAL  271 (272)
Q Consensus       224 ~~~~ll~~~gi~v~~-g~~~~--~-~~~~~~R~s~~-~~~~~i~~~l~~l~~~  271 (272)
                      .+.++++++||.+.| |..|.  . .+.+++|+|+. .+++++++++++|+++
T Consensus       362 ~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~  414 (422)
T 3d6k_A          362 RVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATC  414 (422)
T ss_dssp             HHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Confidence            445566777999999 55564  1 24689999997 5999999999999875

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=1.9e-34  Score=246.54  Aligned_cols=249  Identities=18%  Similarity=0.249  Sum_probs=202.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      |.|++..+.+. +...++..| +++.+|.+++.++.+| +++  .++++++++++||||||.+++.+++.+|++.|++ |
T Consensus       109 d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~-~  187 (363)
T 3ffh_A          109 TNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPS-D  187 (363)
T ss_dssp             CEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCT-T
T ss_pred             CEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCC-C
Confidence            56777666555 778888889 9999999864333333 222  2689999999999999999999999999988877 9


Q ss_pred             CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCc
Q 036024           79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGA  158 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (272)
                      +++|+||+|.++.+ +...+........+++++++|+||.+|++|+|+||+++++++        .+.+.....  ..+.
T Consensus       188 ~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~l~~~~~--~~~~  256 (363)
T 3ffh_A          188 VLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEI--------IRQLNIVRP--PFNT  256 (363)
T ss_dssp             SEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHH--------HHHHHHTCC--SCCC
T ss_pred             cEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHH--------HHHHHHhCC--CCCC
Confidence            99999999998877 444444444445678999999999999999999999998877        566655544  4458


Q ss_pred             chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEee
Q 036024          159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-LGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTV  237 (272)
Q Consensus       159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~  237 (272)
                      +.+.+.++.+++..  .+++++.+++++++++++.+.|++ .|+++.++ .+.|+|+.++. +..++...|.++ ||.+.
T Consensus       257 ~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~~~~~~~~~~-~~~~~~~~l~~~-gi~v~  331 (363)
T 3ffh_A          257 TSIGQKLAIEAIKD--QAFIGECRTSNANGIKQYEAFAKRFEKVKLYPA-NGNFVLIDLGI-EAGTIFSYLEKN-GYITR  331 (363)
T ss_dssp             BHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCC-CSSEEEEECSS-CHHHHHHHHHHT-TEECE
T ss_pred             CHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHhhCCCceECCC-CCeEEEEECCC-CHHHHHHHHHHC-CeEEE
Confidence            89999999999874  367899999999999999999999 69998765 67889999986 566777777655 99999


Q ss_pred             CCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          238 PGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       238 ~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +|+.|+.  ++++|+++. +++++++++++|++++
T Consensus       332 ~g~~~~~--~~~iRis~~-~~~~i~~~~~~l~~~l  363 (363)
T 3ffh_A          332 SGAALGF--PTAVRITIG-KEEDNSAVIALLEKLL  363 (363)
T ss_dssp             ETTTTTC--TTEEEEECC-CHHHHHHHHHHHHHHC
T ss_pred             eCccCCC--CCeEEEECC-CHHHHHHHHHHHHHhC
Confidence            9998875  689999986 8999999999999875

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=6.7e-35  Score=251.77  Aligned_cols=257  Identities=16%  Similarity=0.238  Sum_probs=204.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCC-CcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGN-NFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~-~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..|.+. +...++..| +++.+|+++++ +|.+|++.+      ++++++++++||||||.+++.+++++|+++|
T Consensus       112 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~  191 (390)
T 1d2f_A          112 EGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLC  191 (390)
T ss_dssp             CEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHH
T ss_pred             CEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHH
Confidence            56777766555 777888888 99999987653 455664431      3789999999999999999999999999999


Q ss_pred             HHcCCEEEEcccCCccccCCC-CCCccccCCCC-CceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHHhhh
Q 036024           75 RNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAR-EVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFNRII  151 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~-~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~  151 (272)
                      +++|+++|+||+|.++.+++. ..++..+.... +  . ++|+||.+|++|+|+||+++++ ++        .+.+....
T Consensus       192 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d--~-~~s~sK~~~~~G~r~G~~~~~~~~~--------~~~~~~~~  260 (390)
T 1d2f_A          192 ERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWA--L-LTSGSKSFNIPALTGAYGIIENSSS--------RDAYLSAL  260 (390)
T ss_dssp             HHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEE--E-EECSHHHHTCGGGCCEEEEECSHHH--------HHHHHHHH
T ss_pred             HHcCCEEEEEccccccccCCCCCcCHHHcchhhHh--h-ccCccHhhcccChhheEEEECCHHH--------HHHHHHHH
Confidence            999999999999999887653 33444443211 3  3 9999999999999999999864 45        55555544


Q ss_pred             h-hcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCCceEEEeecCC--CChHHHH
Q 036024          152 C-TCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGINAPYVWAHFPG--RKSWDVF  225 (272)
Q Consensus       152 ~-~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~i~l~~--~~~~~~~  225 (272)
                      . ... .+.+.+++.++.+++.. ..+++++.+++++++++.+.+.|++ + |+.+..+.+++++|+.++.  .+..++.
T Consensus       261 ~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  339 (390)
T 1d2f_A          261 KGRDGLSSPSVLALTAHIAAYQQ-GAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQ  339 (390)
T ss_dssp             HTTSCCCSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHH
T ss_pred             hhhcccCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccCCCHHHHH
Confidence            4 233 35788888888888873 3567889999999999999999998 5 8888887778888999974  4667777


Q ss_pred             HHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          226 AEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ..|++++||.+.||+.|++.+++++|+++..+++++++++++|++++
T Consensus       340 ~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l  386 (390)
T 1d2f_A          340 KALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAI  386 (390)
T ss_dssp             HHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            77776679999999998755578999999888899999999998763

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=8.5e-34  Score=242.75  Aligned_cols=250  Identities=17%  Similarity=0.244  Sum_probs=198.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|.++++++.+ ++.     .++++++++++||||||.+++.+++++|+++|++
T Consensus        99 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  177 (364)
T 1lc5_A           99 RRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKS  177 (364)
T ss_dssp             SEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhh
Confidence            56777766555 888888889 999999986446654 332     2678999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEE-ecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTV-VPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +|+++|+||+|.++.+++  .+.....+..+++++++|+||.+|++|+|+||++ +++++        .+.+.....  .
T Consensus       178 ~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--------~~~l~~~~~--~  245 (364)
T 1lc5_A          178 LNINLILDEAFIDFIPHE--TGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAA--------MARMRRQQM--P  245 (364)
T ss_dssp             HTCEEEEECTTGGGSTTC--CCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHH--------HHHHHHHSC--T
T ss_pred             cCcEEEEECcChhhccCc--cchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHH--------HHHHHHhCC--C
Confidence            999999999999877652  2223332334678999999999999999999999 77776        555554433  3


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi  234 (272)
                      .+.+.+++.++.++++.  .+++++.+++++++++++.+.|+++ |+.+.+ ..++|+|+.++. ...++...|.++ ||
T Consensus       246 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~g~~~~~~~~~-~~~~l~~~l~~~-gi  320 (364)
T 1lc5_A          246 WSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLTVYP-GRANYLLLRCER-EDIDLQRRLLTQ-RI  320 (364)
T ss_dssp             TCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECC-CSSSEEEEEESC-TTCCHHHHHHTT-TE
T ss_pred             CCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECC-CCCeEEEEECCC-cHHHHHHHHHHC-Cc
Confidence            45888999999999985  4678899999999999999999988 888775 467888998874 234566777655 99


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+.||+.|+..+.+++|+++. ++++++++++.|++++
T Consensus       321 ~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~  357 (364)
T 1lc5_A          321 LIRSCANYPGLDSRYYRVAIR-SAAQNERLLAALRNVL  357 (364)
T ss_dssp             ECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHC
T ss_pred             EEeeCcccCCCCCCEEEEEeC-CHHHHHHHHHHHHHHh
Confidence            999999987555789999975 5778888888887653

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=4.7e-35  Score=255.65  Aligned_cols=257  Identities=21%  Similarity=0.338  Sum_probs=206.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC-C---------CCceEEE-EecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T---------SRTDIIF-FCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~---------~~~~~i~-~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..|.+. +...++..| +++.+|.+++ ++.+| +++ +         +++++|+ +++||||||.+++.+++++
T Consensus       134 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~  212 (425)
T 1vp4_A          134 SYCVLDDPAYLGAINAFRQYLANFVVVPLEDD-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKA  212 (425)
T ss_dssp             CEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC-CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHH
Confidence            56777766655 778888888 9999998765 43333 222 1         2688885 6799999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccCCccccCCCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024           70 LVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN  148 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~  148 (272)
                      |+++|+++|+++|+||+|.++.+++.. .++..+. ..+++++++|+||.+| +|+|+||+++++++        ++.+.
T Consensus       213 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~--------~~~l~  282 (425)
T 1vp4_A          213 LVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIG-GPERVVLLNTFSKVLA-PGLRIGMVAGSKEF--------IRKIV  282 (425)
T ss_dssp             HHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHH-CTTTEEEEEESTTTTC-GGGCEEEEECCHHH--------HHHHH
T ss_pred             HHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhC-CCCCEEEEeccccccc-cccceEEEeeCHHH--------HHHHH
Confidence            999999999999999999998876543 4555543 2457899999999999 99999999999877        56666


Q ss_pred             hhhhhccCCcchHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEecCCCceEEEeecC-CCCh
Q 036024          149 RIICTCFNGASNIAQAGGLACLSSEG-LEAVHSVVDYYKENTKILIDTLASL-----GIKVYGGINAPYVWAHFP-GRKS  221 (272)
Q Consensus       149 ~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~~~~~~~~~i~l~-~~~~  221 (272)
                      ........+.+.++|.++.++++... .+++++.+++++++++.+.+.|++.     |+.+..+.+++++|+.++ +.+.
T Consensus       283 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~  362 (425)
T 1vp4_A          283 QAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFDT  362 (425)
T ss_dssp             HHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCCT
T ss_pred             HHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCCCH
Confidence            55555445578899999999998543 3678889999999999999999875     688887778999999998 3455


Q ss_pred             HHHHHHHHHhcCeEeeCCCCCCCC--CCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          222 WDVFAEILEKTHITTVPGSGFGPG--GEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       222 ~~~~~~ll~~~gi~v~~g~~~~~~--~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      .++...|+++ ||.+.||+.|+..  +.+++|+++.. +++++++++++|++++
T Consensus       363 ~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l  415 (425)
T 1vp4_A          363 WEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVV  415 (425)
T ss_dssp             TTTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence            6778888877 9999999988643  46899999865 7999999999998753

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=2.3e-34  Score=245.18  Aligned_cols=249  Identities=19%  Similarity=0.223  Sum_probs=200.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|.+++.++.++ +++    .++++++++++||||||.+++.+++++|+++| +
T Consensus        93 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~  171 (354)
T 3ly1_A           93 AQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASK-P  171 (354)
T ss_dssp             CEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTC-C
T ss_pred             CeEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-C
Confidence            56777776666 778888889 9999999865344333 222    16899999999999999999999999999999 8


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCC-CceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAR-EVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +|+++|+||+|.++.+++...+........ +++++++|+||.+|++|+|+||+++++++        .+.+......  
T Consensus       172 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~~~~~~~~--  241 (354)
T 3ly1_A          172 ANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTV--------IALMGRYVAG--  241 (354)
T ss_dssp             TTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHH--------HHHHGGGTTC--
T ss_pred             CCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHH--------HHHHHHhcCC--
Confidence            999999999999888776544444432223 77899999999999999999999998877        5666655544  


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeE
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHIT  235 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~  235 (272)
                      .+.+.+.+.++.+++...  +++++.+++++++++++.+.|+++|+.+.++ .++|+|+.++. +..++...|.+ +||.
T Consensus       242 ~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~l~~-~gi~  316 (354)
T 3ly1_A          242 EKINFSGVDAALASMNDS--AFITYSKKSNDVSRQILLKALEDLKLPYLPS-EGNFVFHQLVV-PLKDYQTHMAD-AGVL  316 (354)
T ss_dssp             SCCCHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-CSSEEEEECSS-CHHHHHHHHHH-TTEE
T ss_pred             CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHCCCeECCC-CceEEEEECCC-CHHHHHHHHHH-CCEE
Confidence            468899999999998843  7789999999999999999999888888754 67889999986 56666666665 5999


Q ss_pred             eeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          236 TVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       236 v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +. |..++  ..+++|+++. +++++++++++|++++
T Consensus       317 v~-g~~~~--~~~~iRis~~-~~~~i~~~~~~l~~~l  349 (354)
T 3ly1_A          317 IG-RAFPP--ADNWCRISLG-TPQEMQWVADTMREFR  349 (354)
T ss_dssp             CC-CCCTT--CTTEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred             Ee-ecCCC--CCCEEEEEcC-CHHHHHHHHHHHHHHH
Confidence            98 76543  4789999985 7899999999998763

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=9.6e-35  Score=251.41  Aligned_cols=258  Identities=21%  Similarity=0.276  Sum_probs=205.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCCC---CCceEEE-EecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKGT---SRTDIIF-FCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~---~~~~~i~-~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|.+++ ++.++ +++.   +++++++ +++||||||.+++.+++++|+++|++
T Consensus       116 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~  194 (397)
T 2zyj_A          116 SPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVME  194 (397)
T ss_dssp             CEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHH
Confidence            56777666555 777888888 9999998764 43332 2221   3788875 57999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCC--CCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGA--REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~--~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +|+++|+||+|.++.+++. ..++..+...  .+++++++|+||.+| +|+|+||+++++++        .+.+......
T Consensus       195 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~--------~~~l~~~~~~  265 (397)
T 2zyj_A          195 RGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEA--------LQKLVQAKQG  265 (397)
T ss_dssp             HTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHH--------HHHHHHHHHH
T ss_pred             cCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHHH--------HHHHHHHHHh
Confidence            9999999999999887654 3455555311  157899999999999 99999999999777        5666655544


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---CCeEecCCCceEEEeecC-CCChHHHHHHHH
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---GIKVYGGINAPYVWAHFP-GRKSWDVFAEIL  229 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~i~l~-~~~~~~~~~~ll  229 (272)
                      ...+++.++|.++.++++....+++++.+++++++++.+.+.|++.   |+.+..+.+++++|+.++ +.+..++...|.
T Consensus       266 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~  345 (397)
T 2zyj_A          266 ADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRAL  345 (397)
T ss_dssp             HHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTCCHHHHHHHHH
T ss_pred             hcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCCCCHHHHHHHHH
Confidence            4455788999999999885423678899999999999999999875   788877778999999997 445667777777


Q ss_pred             HhcCeEeeCCCCCCCC--CCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          230 EKTHITTVPGSGFGPG--GEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~~--~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      ++ ||.+.||..|+..  +++++|+++.. +++++++++++|++++
T Consensus       346 ~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l  390 (397)
T 2zyj_A          346 EE-NVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRAL  390 (397)
T ss_dssp             HT-TEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             HC-CCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHH
Confidence            77 9999999988743  46899999865 7999999999998753

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=100.00  E-value=4.7e-35  Score=254.35  Aligned_cols=252  Identities=15%  Similarity=0.089  Sum_probs=196.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-------C-CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-------S-RTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-------~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|.+. |...++..| +++++|+..+.++.+|++.+       + +++++++++||||||.+++.+++++|+++
T Consensus       132 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~  211 (409)
T 4eu1_A          132 NRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDV  211 (409)
T ss_dssp             CEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHH
T ss_pred             CEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHH
Confidence            67888777776 888888899 99999986555677775432       2 44566668999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCC---CCCccccCCCCCceEEEecCccccCCCccceeEE--EecccccccCCcchHHHHH
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGC---PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWT--VVPEELLFSSGFPVINDFN  148 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~--~~~~~~~~~~~~~~~~~~~  148 (272)
                      |+++|+++|+||+|.++.+++.   ..++..+.+..+++++++|+||++|++|+|+||+  +++++..   ...+.+.+.
T Consensus       212 ~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~---~~~l~~~~~  288 (409)
T 4eu1_A          212 IKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEE---AKRLVSQLA  288 (409)
T ss_dssp             HHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHH---HHHHHHHHH
T ss_pred             HHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHH---HHHHHHHHH
Confidence            9999999999999999887752   2344444334567899999999999999999997  5554320   001145555


Q ss_pred             hhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCC
Q 036024          149 RIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGR  219 (272)
Q Consensus       149 ~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~  219 (272)
                      ........+++.+.|.++.+++.+..     .++.++++++++++++++.+.|+++|    +.+..+++++++|+.++  
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~--  366 (409)
T 4eu1_A          289 LLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLT--  366 (409)
T ss_dssp             HHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCC--
T ss_pred             HHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCC--
Confidence            55555556678899999998888542     35678899999999999999999987    77777889999997664  


Q ss_pred             ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                        .+++.++++++||.+.||          .|++++ .+++++++++++|++++
T Consensus       367 --~~~~~~ll~~~gv~v~p~----------~Ri~~~~~~~~~i~~~~~~l~~~l  408 (409)
T 4eu1_A          367 --REQVELLRSEYHIYMTLN----------GRAAVSGLNSTNVEYVSQAIHNVT  408 (409)
T ss_dssp             --HHHHHHHHHHHCEECCTT----------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHcCCEEEcCC----------CEEEEEecCHhhHHHHHHHHHHHh
Confidence              366788888889999874          388875 47778999999998763

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=1.3e-34  Score=247.70  Aligned_cols=248  Identities=18%  Similarity=0.282  Sum_probs=200.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. +...++..| +++.+|++ +.++ +|++.     .++++++++++||||||.+++.+++.+|+++| +
T Consensus       107 d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~-~  183 (365)
T 3get_A          107 NAFLQAGVTFAMYEIYAKQCGAKCYKTQSI-THNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGV-N  183 (365)
T ss_dssp             CEEEECSSCCTHHHHHHHHHTCEEEECSSS-SCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTS-C
T ss_pred             CEEEEeCCChHHHHHHHHHcCCEEEEEecC-CCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhC-C
Confidence            56777776666 777888888 99999983 3355 66443     27899999999999999999999999999998 5


Q ss_pred             cCCEEEEcccCCcccc--C-CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           77 NGSIIIFDSAYAAYVT--D-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~--~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +|+++|+||+|.++.+  . +.+.+.....+..+++++++|+||.+|++|+|+||+++++++        .+.+......
T Consensus       184 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~~~~~~~~  255 (365)
T 3get_A          184 EDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANI--------ISAFYKLRAP  255 (365)
T ss_dssp             TTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHH--------HHHHHHHSCT
T ss_pred             CCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHH--------HHHHHHhcCC
Confidence            7999999999998874  3 333344333233467899999999999999999999998777        5566554443


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcC
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTH  233 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~g  233 (272)
                        .+.+.+.+.++.+++..  .+++++.+++++++++++.+.|+++|+++.++ .+.|+|+.++..+..++...|.++ |
T Consensus       256 --~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~-g  329 (365)
T 3get_A          256 --FNVSNLALKAAVAAMDD--DEFTEKTLENNFSQMELYKEFAKKHNIKIIDS-YTNFITYFFDEKNSTDLSEKLLKK-G  329 (365)
T ss_dssp             --TCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHTTCEECCC-SSSEEEEECSSSCHHHHHHHHHTT-T
T ss_pred             --CCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCEECCC-CCeEEEEECCCCCHHHHHHHHHHC-C
Confidence              34888999999999884  37789999999999999999999999988765 677899999865566666666655 9


Q ss_pred             eEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          234 ITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       234 i~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      |.+.||+.|+   .+++|+++. +++++++++++|++++
T Consensus       330 i~v~~g~~~~---~~~iRis~~-~~~~i~~l~~~l~~~l  364 (365)
T 3get_A          330 IIIRNLKSYG---LNAIRITIG-TSYENEKFFTEFDKIL  364 (365)
T ss_dssp             EECEECGGGT---CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred             EEEEECccCC---CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence            9999999887   689999986 8999999999998764

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=100.00  E-value=2.2e-34  Score=251.19  Aligned_cols=258  Identities=15%  Similarity=0.161  Sum_probs=203.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEe-cCCCccccCCCHHHHHHHHHHH-
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFC-SPNNPTGHAATQNQLEQLVEFA-   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~-   74 (272)
                      |.|++..|.+. |...++..| +++++|++.+ ++.+| +++    .+++++++++ +||||||.+++.+++++|+++| 
T Consensus       125 d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~  203 (423)
T 3ez1_A          125 PKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD-GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQA  203 (423)
T ss_dssp             CEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCC
T ss_pred             CEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC-CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHH
Confidence            77888877766 778888899 9999999865 44443 222    3688999876 8999999999999999999999 


Q ss_pred             HHcCCEEEEcccCCccccCC-C---CCCcccc---CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHH
Q 036024           75 RNNGSIIIFDSAYAAYVTDG-C---PRSIYEI---PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDF  147 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~-~---~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~  147 (272)
                      +++|+++|+||+|..+.+.+ .   ..++..+   .+..+++++++|+||.+ ++|+|+||+++++++        ++.+
T Consensus       204 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~G~r~G~~~~~~~~--------~~~~  274 (423)
T 3ez1_A          204 AAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKIT-FAGAGLGFVASSEDN--------IRWL  274 (423)
T ss_dssp             SSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTS-CSSSSCEEEEECHHH--------HHHH
T ss_pred             hccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhc-cCCcceEEEEeCHHH--------HHHH
Confidence            99999999999999654443 2   2233332   13467899999999994 699999999999887        6777


Q ss_pred             HhhhhhccCCcchHHHHHHHHhccc--cc-HHHHHHHHHHHHHHHHHHHHHHHh----CC--CeEecCCCceEEEeecCC
Q 036024          148 NRIICTCFNGASNIAQAGGLACLSS--EG-LEAVHSVVDYYKENTKILIDTLAS----LG--IKVYGGINAPYVWAHFPG  218 (272)
Q Consensus       148 ~~~~~~~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~~~l~~~L~~----~g--~~~~~~~~~~~~~i~l~~  218 (272)
                      .........+++.+.|.++.+++.+  .. .+++++.++.++++++.+.+.|.+    +|  +.+..+++++|+|+.++.
T Consensus       275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~  354 (423)
T 3ez1_A          275 SKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAE  354 (423)
T ss_dssp             HHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESS
T ss_pred             HHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCC
Confidence            7777777777999999999999886  32 267788888888888888777765    45  777788889999999986


Q ss_pred             CChHHHHHHHHHhcCeEeeC-CCCCCC---CCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          219 RKSWDVFAEILEKTHITTVP-GSGFGP---GGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       219 ~~~~~~~~~ll~~~gi~v~~-g~~~~~---~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      .+. +.+.++++++||.+.| |+.|+.   .+++++|+++.. +++++++++++|++++
T Consensus       355 ~~~-~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l  412 (423)
T 3ez1_A          355 PVA-DRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACI  412 (423)
T ss_dssp             SCH-HHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHHH
T ss_pred             CcH-HHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHH
Confidence            544 4455556677999999 666653   357899999865 8999999999998763

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=8.6e-34  Score=246.09  Aligned_cols=257  Identities=21%  Similarity=0.270  Sum_probs=204.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--------CCCceEEE-EecCCCccccCCCHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--------TSRTDIIF-FCSPNNPTGHAATQNQLEQLV   71 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--------~~~~~~i~-~~~p~nptG~~~~~~~l~~l~   71 (272)
                      |.|++..|.+. +...++..| +++.+|.+++ ++.++ +++        .+++++|+ +++|+||||.+++.+++++|+
T Consensus       123 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~  201 (407)
T 2zc0_A          123 DVVITENPSYINTLLAFEQLGAKIEGVPVDND-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALL  201 (407)
T ss_dssp             CEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHH
T ss_pred             CEEEEeCCChHHHHHHHHHcCCEEEEcccCCC-CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHH
Confidence            56777766655 777778888 9999998764 43333 221        13788875 569999999999999999999


Q ss_pred             HHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024           72 EFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI  150 (272)
Q Consensus        72 ~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~  150 (272)
                      ++|+++|+++|+||+|..+.+++. ..++..+. ..+++++++|+||.+| +|+|+||+++++++        .+.+...
T Consensus       202 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~--------~~~~~~~  271 (407)
T 2zc0_A          202 EIASKYDLLIIEDTAYNFMRYEGGDIVPLKALD-NEGRVIVAGTLSKVLG-TGFRIGWIIAEGEI--------LKKVLMQ  271 (407)
T ss_dssp             HHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGC-SSCCEEEEEESTTTTC-TTSCCEEEECCHHH--------HHHHHHH
T ss_pred             HHHHHcCCEEEEECCCcccccCCCCCCChhhcC-CCCCEEEEcccccccC-CCcceEEEecCHHH--------HHHHHHH
Confidence            999999999999999998877654 24455553 2357899999999999 99999999998776        5666665


Q ss_pred             hhhccCCcchHHHHHHHHhccccc-H-HHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCCCceEEEeecC-CCChHHHH
Q 036024          151 ICTCFNGASNIAQAGGLACLSSEG-L-EAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPYVWAHFP-GRKSWDVF  225 (272)
Q Consensus       151 ~~~~~~~~~~~~~~a~~~~l~~~~-~-~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~i~l~-~~~~~~~~  225 (272)
                      ......+++.+.|.++.++++... . +++++.+++++++++++.+.|++.  ++.+..+.+++++|+.++ +.+..++.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  351 (407)
T 2zc0_A          272 KQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGADGISFA  351 (407)
T ss_dssp             HTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTCCHHHHH
T ss_pred             HHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCCCCHHHHH
Confidence            555555678899999998887532 2 467788999999999999999874  688777778899999997 45667778


Q ss_pred             HHHHHhcCeEeeCCCCCCCC--CCCeEEEEccC-CHHHHHHHHHHHHHh
Q 036024          226 AEILEKTHITTVPGSGFGPG--GEEYIRISGFG-HRESILEASRRLEAL  271 (272)
Q Consensus       226 ~~ll~~~gi~v~~g~~~~~~--~~~~~R~s~~~-~~~~i~~~l~~l~~~  271 (272)
                      ..|++++||.+.||+.|+..  +.+++|+++.. +++++++++++|+++
T Consensus       352 ~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~  400 (407)
T 2zc0_A          352 NELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKL  400 (407)
T ss_dssp             HHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHH
T ss_pred             HHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence            88877779999999988753  46899999865 789999999999875

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=2.6e-34  Score=248.93  Aligned_cols=251  Identities=14%  Similarity=0.114  Sum_probs=193.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCC-------C-CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLK-------G-TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~-------~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|.+. |...++..| +++++|++.+.++.+|++       + .++++++++++||||||.+++.+++++|+++
T Consensus       124 d~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~  203 (401)
T 7aat_A          124 RDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASV  203 (401)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHH
T ss_pred             CEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence            66777777666 888888899 999999865445555543       2 2577899999999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCC---CCCccccCCCCCceEEEecCccccCCCccceeEEEec---ccccccCCcchHHHH
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGC---PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP---EELLFSSGFPVINDF  147 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~---~~~~~~~~~~~~~~~  147 (272)
                      |+++|+++|+||+|.++.+++.   ..++..+....+++++++|+||.+|++|+|+||++++   ++..    ..+...+
T Consensus       204 ~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~----~~~~~~~  279 (401)
T 7aat_A          204 VKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEA----KRVESQL  279 (401)
T ss_dssp             HHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHH----HHHHHHH
T ss_pred             HHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHH----HHHHHHH
Confidence            9999999999999999887652   2223333234577899999999999999999998873   2210    1124555


Q ss_pred             HhhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCC
Q 036024          148 NRIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPG  218 (272)
Q Consensus       148 ~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~  218 (272)
                      ..........++..+|.++..++.+..     .+++++++++++++++++.+.|+++|    +.+..+++++++|+.++ 
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-  358 (401)
T 7aat_A          280 KILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK-  358 (401)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC-
T ss_pred             HHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCC-
Confidence            555555555677788888877776432     35678899999999999999999875    67777888999998774 


Q ss_pred             CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       219 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                         .+.+..+++++||.+.|+          +|++++ .+++++++++++|++++
T Consensus       359 ---~~~~~~ll~~~gi~v~~~----------~Ris~~~~~~~~i~~~~~~l~~~~  400 (401)
T 7aat_A          359 ---PEQVERLTKEFSIYMTKD----------GRISVAGVASSNVGYLAHAIHQVT  400 (401)
T ss_dssp             ---HHHHHHHHHHHCEECCTT----------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHhCCEeccCC----------CeEEeccCChhhHHHHHHHHHHHh
Confidence               456678888889999653          699985 36667999999998763

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=100.00  E-value=7.9e-34  Score=247.24  Aligned_cols=250  Identities=15%  Similarity=0.164  Sum_probs=194.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC---------CCce-EEEEecC-CCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT---------SRTD-IIFFCSP-NNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~---------~~~~-~i~~~~p-~nptG~~~~~~~l~~l   70 (272)
                      |.|++..|.+. |...+...| +++++|+++++ +.+|++.+         ++++ ++++++| |||||.+++.+++++|
T Consensus       127 d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l  205 (418)
T 3rq1_A          127 DEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSI  205 (418)
T ss_dssp             CEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred             CEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHH
Confidence            66777777766 888888899 99999996553 55564431         1566 7788899 9999999999999999


Q ss_pred             HHHHH------HcCCEEEEcccCCccccCCCC-CCc-cccCCCCCc--eEEEecCccccCCCccceeEEEe---cccccc
Q 036024           71 VEFAR------NNGSIIIFDSAYAAYVTDGCP-RSI-YEIPGAREV--AIEISSFSKFSGFTGVRLGWTVV---PEELLF  137 (272)
Q Consensus        71 ~~~~~------~~~~~vi~D~~~~~~~~~~~~-~~~-~~~~~~~~~--~i~~~s~sK~~g~~g~r~G~~~~---~~~~~~  137 (272)
                      +++|+      ++++++|+||+|.++.+.+.. .++ ....+..++  +++++|+||.+|++|+|+||+++   ++++  
T Consensus       206 ~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~--  283 (418)
T 3rq1_A          206 LNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEI--  283 (418)
T ss_dssp             HHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHH--
T ss_pred             HHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHH--
Confidence            99999      899999999999988766431 222 223333444  58999999999999999999998   6666  


Q ss_pred             cCCcchHHHHHhhhhh----ccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC
Q 036024          138 SSGFPVINDFNRIICT----CFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN  208 (272)
Q Consensus       138 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~  208 (272)
                            ++.+......    .+..++.++|.++.+++.+..     .++.++++++++++++.+.+.|+++|+++..+++
T Consensus       284 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~  357 (418)
T 3rq1_A          284 ------ADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPMLPYRG  357 (418)
T ss_dssp             ------HHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCS
T ss_pred             ------HHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Confidence                  4555443322    234578899999999888542     2455677889999999999999988999988888


Q ss_pred             ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          209 APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       209 ~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                      ++|+|+.++  +..++.. .++++||.+.||.       +++|++++ .+++++++++++|++++
T Consensus       358 ~~~~~~~~~--~~~~~~~-~l~~~gi~v~~g~-------~~iRis~~~~~~~~i~~~~~~l~~~l  412 (418)
T 3rq1_A          358 GFFITIPTD--SANAICE-ELKKEHIYVIALA-------NGIRIAACGIPKCQMTGLAEKIYNAM  412 (418)
T ss_dssp             SSEEEEECT--THHHHHH-HHHHTTEECEECS-------SEEEEEGGGSCHHHHTTHHHHHHHHH
T ss_pred             eEEEEcCCC--CHHHHHH-HHHhCCEEEecCC-------CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            999999885  4556665 4566799999973       67999986 49999999999998763

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=2.7e-33  Score=243.66  Aligned_cols=226  Identities=18%  Similarity=0.254  Sum_probs=179.4

Q ss_pred             CcccCCCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEE
Q 036024           35 NFFPDLKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIE  111 (272)
Q Consensus        35 ~~~~dl~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~  111 (272)
                      ++.+|++.   .++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+..+......  .....+++++
T Consensus       167 ~~~~d~~~l~~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~--~~~~~~~~i~  244 (417)
T 3g7q_A          167 KYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEA--RPLWNPNIIL  244 (417)
T ss_dssp             EEECCGGGCCCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCC--CCCCCTTEEE
T ss_pred             ccccCHHHhccccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccccccc--ccCCCCCEEE
Confidence            34455433   367899999999999999999999999999999999999999999863322111111  1123567899


Q ss_pred             EecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHH-HHHHHHHHH
Q 036024          112 ISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHS-VVDYYKENT  189 (272)
Q Consensus       112 ~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~-~~~~~~~~~  189 (272)
                      ++|+|| ++.+|+|+||+++++++        .+.+.........+++.++|.++.+++..... ++..+ +++++++++
T Consensus       245 ~~s~sK-~~~~G~r~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  315 (417)
T 3g7q_A          245 CMSLSK-LGLPGSRCGIIIANDKT--------ITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRV  315 (417)
T ss_dssp             EEESGG-GTCTTSCCEEEECCHHH--------HHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHH
T ss_pred             EEechh-ccCCCcceEEEEeCHHH--------HHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence            999999 57899999999998887        67777777666677889999999999986554 44444 778899999


Q ss_pred             HHHHHHHHhC----CCeEecCCCceEEEeecCC--CChHHHHHHHHHhcCeEeeCCCCCCCCC-------CCeEEEEccC
Q 036024          190 KILIDTLASL----GIKVYGGINAPYVWAHFPG--RKSWDVFAEILEKTHITTVPGSGFGPGG-------EEYIRISGFG  256 (272)
Q Consensus       190 ~~l~~~L~~~----g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ll~~~gi~v~~g~~~~~~~-------~~~~R~s~~~  256 (272)
                      +.+.+.|.+.    |+.+..+++++++|+.++.  .+..++...+ .++||.+.||+.|++..       .+++|+|+..
T Consensus       316 ~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~  394 (417)
T 3g7q_A          316 QQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPITTELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP  394 (417)
T ss_dssp             HHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCSSCHHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS
T ss_pred             HHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCCCCHHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeEEEEecC
Confidence            9999888763    5888888889999999984  4666766666 55699999999987543       5799999977


Q ss_pred             CHHHHHHHHHHHHHhC
Q 036024          257 HRESILEASRRLEALF  272 (272)
Q Consensus       257 ~~~~i~~~l~~l~~~l  272 (272)
                      +++++++++++|++++
T Consensus       395 ~~~~i~~~~~~l~~~l  410 (417)
T 3g7q_A          395 EPDKIEAGVKILAEEI  410 (417)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            9999999999998763

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=3.6e-33  Score=238.99  Aligned_cols=245  Identities=16%  Similarity=0.229  Sum_probs=199.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+. +...++..| +++.+|.+++  +.+|++.+     + +++++++++||||||.+++.+++++|+++|+
T Consensus       110 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~  187 (367)
T 3euc_A          110 AKVMAPVPGFVMYAMSAQFAGLEFVGVPLRAD--FTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQ  187 (367)
T ss_dssp             CEEEEEESCSCCSCHHHHTTTCEEEEEECCTT--SCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTB
T ss_pred             CEEEEcCCCHHHHHHHHHHcCCeEEEecCCCC--CCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhh
Confidence            56777766655 778888889 9999999864  44453331     3 7999999999999999999999999999999


Q ss_pred             Hc--CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           76 NN--GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        76 ~~--~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      ++  |+++|+||+|.++...+ ..  ... +..+++++++|+||. +++|+|+||+++++++        .+.+..... 
T Consensus       188 ~~~~~~~li~De~~~~~~~~~-~~--~~~-~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~--------~~~~~~~~~-  253 (367)
T 3euc_A          188 GSVCRSLVVVDEAYQPFAQES-WM--SRL-TDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQW--------LEQLDKVRP-  253 (367)
T ss_dssp             TTSCBCEEEEECTTCCSSSCC-SG--GGG-GTCTTEEEEEECCCT-TSCSCCEEEEEECHHH--------HHHHGGGCC-
T ss_pred             hcCCCcEEEEeCcchhhcccc-hH--HHH-hhCCCEEEEecchhh-cccccCceeeeeCHHH--------HHHHHHhCC-
Confidence            99  99999999999866332 11  122 234678999999999 8899999999998877        555554433 


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhc
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKT  232 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~  232 (272)
                       ..+.+.+.+.++.++++.  .+++++.+++++++++++.+.|+++ |+.+.+ ..++++|+.++  +..++...| +++
T Consensus       254 -~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~~~~~~~~~--~~~~l~~~l-~~~  326 (367)
T 3euc_A          254 -PYNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFP-SAANFLLARVP--DAAQTFDRL-LAR  326 (367)
T ss_dssp             -SSCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECC-CSSSEEEEECS--CHHHHHHHH-HTT
T ss_pred             -CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCeEEEEECC--CHHHHHHHH-HHC
Confidence             345889999999999985  6678999999999999999999998 898655 57889999998  556666665 556


Q ss_pred             CeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          233 HITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       233 gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ||.+.+|+.|+....+++|+++. +++++++++++|++++
T Consensus       327 gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l  365 (367)
T 3euc_A          327 KVLIKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASL  365 (367)
T ss_dssp             TEECEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred             CeEEEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHh
Confidence            99999999887667899999986 8999999999999875

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=100.00  E-value=1.9e-33  Score=239.30  Aligned_cols=245  Identities=19%  Similarity=0.283  Sum_probs=191.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeec-CCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLEC-GPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI   80 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~-~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~   80 (272)
                      |.|++..|.+. +...++..| +++.+|. ++++++.+     ++++++++++||||||.+++.+++++|++.|+++  +
T Consensus        90 d~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~-----~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~--~  162 (350)
T 3fkd_A           90 SRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF-----SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDT--T  162 (350)
T ss_dssp             CEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC-----TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTS--E
T ss_pred             CEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc-----CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCC--E
Confidence            66777777666 778888889 9999999 65445544     6899999999999999999999999988888655  9


Q ss_pred             EEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcch
Q 036024           81 IIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN  160 (272)
Q Consensus        81 vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (272)
                      +|+||+|.++.+.+... .... ...+++++++|+||.+|++|+|+||+++++++        .+.+.....  ..+.+.
T Consensus       163 li~Dea~~~~~~~~~~~-~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~--------~~~~~~~~~--~~~~~~  230 (350)
T 3fkd_A          163 FVLDQSYVSFTTEEVIR-PADI-KGRKNLVMVYSFSHAYGIPGLRIGYIVANKDF--------MKRVAAFST--PWAVNA  230 (350)
T ss_dssp             EEEECTTTTSCSSCCCC-GGGG-TTCSSEEEEEESHHHHSCGGGCCEEEECCHHH--------HHHHHTTCC--TTCSCH
T ss_pred             EEEECchhhhccCcchh-hHHh-hcCCCEEEEecCchhccCcchheEeEEeCHHH--------HHHHHHhCC--CCCCCH
Confidence            99999999887665332 2222 24577899999999999999999999997777        566655543  345888


Q ss_pred             HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCC
Q 036024          161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPG  239 (272)
Q Consensus       161 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g  239 (272)
                      +.+.++.++++... .+.++.++.. ++++.+.+.|+++ |+.+.++ .+.++|+.++..+..++...|.+++||.+.||
T Consensus       231 ~~~~~~~~~l~~~~-~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g  307 (350)
T 3fkd_A          231 LAIEAAKFILIHPA-QFTLPIRKWQ-RNTVDFITALNRLDGVEVHPS-GTTFFLLRLKKGTAAELKKYMLEEYNMLIRDA  307 (350)
T ss_dssp             HHHHHHHHHHHCTT-TTCCCHHHHH-HHHHHHHHHHHHSTTEEECCC-SSSEEEEEESSSCHHHHHHHHHHTTCEECEEC
T ss_pred             HHHHHHHHHHhCHH-HHHHHHHHHH-HHHHHHHHHHhcCCCcEECCC-CCcEEEEECCCCCHHHHHHHHHHHCCEEEEeC
Confidence            99999999888543 2223344444 8899999999988 8888664 67888999985567778888877579999999


Q ss_pred             CCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          240 SGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       240 ~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      +.|+..+.+++|+++. +++++++++++|+++
T Consensus       308 ~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~  338 (350)
T 3fkd_A          308 SNFRGLDESYVRITTQ-RPAQNQLFIKALETF  338 (350)
T ss_dssp             TTSTTCCTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHH
Confidence            9998777899999985 666777777766654

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=3.3e-34  Score=249.87  Aligned_cols=251  Identities=16%  Similarity=0.154  Sum_probs=194.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-------C-CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-------T-SRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-------~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|.+. |...++..| +++++|...+.++.+|++.       . ++++++++++||||||.+++.+++++|+++
T Consensus       144 d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~  223 (420)
T 4f4e_A          144 AKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEV  223 (420)
T ss_dssp             CCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHH
T ss_pred             CEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence            67788877776 888888899 9999999433356666432       1 567888889999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCC--CCCccccCCCCCceEEEecCccccCCCccceeEEEe--cc-cccccCCcchHHHHH
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGC--PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV--PE-ELLFSSGFPVINDFN  148 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~~-~~~~~~~~~~~~~~~  148 (272)
                      |+++|+++|+||+|.++.+++.  ..++..+.+..+++++++|+||.+|++|+|+||+++  ++ +.+.    ++...+.
T Consensus       224 ~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~----~~~~~~~  299 (420)
T 4f4e_A          224 VKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAA----RVLSQLK  299 (420)
T ss_dssp             HHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHH----HHHHHHH
T ss_pred             HHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHH----HHHHHHH
Confidence            9999999999999999888742  234444444567889999999999999999999875  22 3210    1122333


Q ss_pred             hhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCCceEEEeecCCC
Q 036024          149 RIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASL----GIKVYGGINAPYVWAHFPGR  219 (272)
Q Consensus       149 ~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~i~l~~~  219 (272)
                      .........++.++|.++..++.+..     .+++++++++++++++.+.+.|+++    |+.+..+++|+|+|+.++  
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~--  377 (420)
T 4f4e_A          300 RVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT--  377 (420)
T ss_dssp             HHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC--
T ss_pred             HHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC--
Confidence            33334555578889998888887543     4678999999999999999999987    678887889999998874  


Q ss_pred             ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                        .+.+.++++++||.+.|+          .|++++. +++++++++++|++++
T Consensus       378 --~~~~~~~l~~~gI~v~~~----------~Ris~~~~~~~~i~~~~~~l~~~l  419 (420)
T 4f4e_A          378 --SAQVDRLREEFGIYAVST----------GRICVAALNTRNLDVVANAIAAVL  419 (420)
T ss_dssp             --HHHHHHHHHHHCEECCTT----------SEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHhCCEEecCC----------CeEEEecCCHHHHHHHHHHHHHHh
Confidence              255677777779999874          2999865 7888999999998863

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=100.00  E-value=2.4e-34  Score=248.68  Aligned_cols=251  Identities=15%  Similarity=0.149  Sum_probs=193.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-------C-CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-------T-SRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-------~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|.+. |...++..| +++.+|...+.++.+|++.       . ++++++++++||||||.+++.+++++|+++
T Consensus       122 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~  201 (397)
T 3fsl_A          122 SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEI  201 (397)
T ss_dssp             CCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHH
T ss_pred             CeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHH
Confidence            66777777665 888888899 9999999544456666433       1 567788888999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCC--CCCCccccCCCCCceEEEecCccccCCCccceeEEEecc---cccccCCcchHHHHH
Q 036024           74 ARNNGSIIIFDSAYAAYVTDG--CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE---ELLFSSGFPVINDFN  148 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~---~~~~~~~~~~~~~~~  148 (272)
                      |+++|+++|+||+|.++.+++  ...++..+.+..+++++++|+||.+|++|+|+||++++.   +.+.    ++...+.
T Consensus       202 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~----~~~~~~~  277 (397)
T 3fsl_A          202 LKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAG----RVLGQLK  277 (397)
T ss_dssp             HHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHH----HHHHHHH
T ss_pred             HHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHH----HHHHHHH
Confidence            999999999999999988763  223444444456788999999999999999999997632   2210    0112222


Q ss_pred             hhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCCceEEEeecCCC
Q 036024          149 RIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASL----GIKVYGGINAPYVWAHFPGR  219 (272)
Q Consensus       149 ~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~i~l~~~  219 (272)
                      .........++.++|.++..++.+..     .+++++++++++++++.+.+.|+++    |+.+..+++++|+|+.++  
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--  355 (397)
T 3fsl_A          278 ATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS--  355 (397)
T ss_dssp             HHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCC--
T ss_pred             HHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCC--
Confidence            22233455568888988888887542     4678899999999999999999987    688888888999998874  


Q ss_pred             ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                        .+.+.++++++||.+.||.          |+++.. +++++++++++|++++
T Consensus       356 --~~~~~~~l~~~gi~v~~g~----------Ris~~~~~~~~i~~~~~~l~~~l  397 (397)
T 3fsl_A          356 --AAQVDRLREEFGVYLIASG----------RMCVAGLNTANVQRVAKAFAAVM  397 (397)
T ss_dssp             --HHHHHHHHHTTCEECCTTC----------EEEGGGCCTTTHHHHHHHHHHHC
T ss_pred             --HHHHHHHHHhCCEEECCCC----------eEEEEecCHhhHHHHHHHHHhhC
Confidence              2456777788899998863          999865 7888999999999875

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=100.00  E-value=4.3e-34  Score=246.98  Aligned_cols=238  Identities=18%  Similarity=0.209  Sum_probs=185.6

Q ss_pred             ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024            5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII   82 (272)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi   82 (272)
                      .|++..|.+. |...++..| +++.++++.+ ++.     .+++|++++++||||||.+++     +|++.++.+++++|
T Consensus       121 ~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l~-----~~~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii  189 (391)
T 3bwn_A          121 SVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-GFD-----KKGPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVI  189 (391)
T ss_dssp             EEEECSSCCTHHHHHHHTTCBTTEEEEEEST-TCC-----CCSCEEEEEESSCTTTCCCCC-----CCC-----CCCEEE
T ss_pred             eEEEcCCCchhHHHHHHHcCCeEEEecCCHH-HcC-----CCCCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEE
Confidence            7888887777 888888889 9999998764 444     257899999999999999996     35542222339999


Q ss_pred             EcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEe-cccccccCCcchHHHHHhhhhhccCCcchH
Q 036024           83 FDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV-PEELLFSSGFPVINDFNRIICTCFNGASNI  161 (272)
Q Consensus        83 ~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (272)
                      +||+|.+    +...++..   ..+++++++||||.+|++|+|+||+++ ++++        ++.+.........+++.+
T Consensus       190 ~De~y~~----~~~~~l~~---~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l--------~~~l~~~~~~~~~~~~~~  254 (391)
T 3bwn_A          190 HDFAYYW----PHYTPITR---RQDHDIMLFTFSKITGHAGSRIGWALVKDKEV--------AKKMVEYIIVNSIGVSKE  254 (391)
T ss_dssp             EECTTCS----TTTSCCCC---CBCCSEEEEEHHHHHSCGGGCEEEEEECCHHH--------HHHHHHHHHHHHSSCCHH
T ss_pred             EeCCCCC----CCCCcccc---CCCCeEEEEechhhcCCCccceEEEEecCHHH--------HHHHHHHhcccccCCCHH
Confidence            9999984    21223322   356789999999999999999999997 6666        666766665545668999


Q ss_pred             HHHHHHHhccccc---------HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC-------------CCceEEEeecCC
Q 036024          162 AQAGGLACLSSEG---------LEAVHSVVDYYKENTKILIDTLASL-GIKVYGG-------------INAPYVWAHFPG  218 (272)
Q Consensus       162 ~~~a~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-------------~~~~~~~i~l~~  218 (272)
                      +|.++.+++.+..         .++++++++.++++++.+.+.|+++ |+++..+             ++|+|+|+.++.
T Consensus       255 ~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~  334 (391)
T 3bwn_A          255 SQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKE  334 (391)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESS
T ss_pred             HHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCc
Confidence            9999999998542         4678999999999999999999988 6666543             345689999974


Q ss_pred             CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       219 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .   +.+.++++++||.+.||+.|+. +++++|+|++.+++++++++++|++++
T Consensus       335 ~---~~~~~~l~~~gV~v~pg~~fg~-~~~~iRis~~~~~e~i~~~~~~L~~~~  384 (391)
T 3bwn_A          335 E---TDLVSELRRHKVMSRAGERCGS-DKKHVRVSMLSREDVFNVFLERLANMK  384 (391)
T ss_dssp             S---CCHHHHHHHTTEECEEGGGGTC-CTTEEEEESCSCHHHHHHHHHHHHSCC
T ss_pred             H---HHHHHHHHHCCEEEccCCCCCC-CCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            2   3456667778999999999975 568999999889999999999998764

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=100.00  E-value=5.6e-34  Score=247.72  Aligned_cols=251  Identities=16%  Similarity=0.142  Sum_probs=196.9

Q ss_pred             cccccccCccc-chHHhcccc-e-eEEeecCCCCCcccCCCCC--------CCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-N-IEYLECGPGNNFFPDLKGT--------SRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~-~~~~~~~~~~~~~~dl~~~--------~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..|.+. |...+...| + ++.+|.++++++.+|++.+        ++++++++++||||||.+++.+++++|++
T Consensus       131 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~  210 (412)
T 1ajs_A          131 TPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIAS  210 (412)
T ss_dssp             SCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHH
T ss_pred             CeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHH
Confidence            77888877666 888888888 8 9999986444666664431        36678888999999999999999999999


Q ss_pred             HHHHcCCEEEEcccCCccccCC---CCCCccccCCCCCceEEEecCccccCCCccceeEEEe---cccccccCCcchHHH
Q 036024           73 FARNNGSIIIFDSAYAAYVTDG---CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV---PEELLFSSGFPVIND  146 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~---~~~~~~~~~~~~~~~  146 (272)
                      +|+++|+++|+||+|.++.+++   ...++..+....+++++++|+||.+|.+|+|+||+++   +++...    .+.+.
T Consensus       211 ~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~----~~~~~  286 (412)
T 1ajs_A          211 VMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSIL----RVLSQ  286 (412)
T ss_dssp             HHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHH----HHHHH
T ss_pred             HHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHH----HHHHH
Confidence            9999999999999999887764   3334444433457789999999999978999999998   665311    11344


Q ss_pred             HHhhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecC
Q 036024          147 FNRIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFP  217 (272)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~  217 (272)
                      +......+..+++.++|.++.++++...     .+++++.+++++++++++.+.|++++    +.+..+.+++++|+.++
T Consensus       287 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~  366 (412)
T 1ajs_A          287 MQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN  366 (412)
T ss_dssp             HHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC
T ss_pred             HHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC
Confidence            4443334444468899999999888543     35788999999999999999999886    77777788999998764


Q ss_pred             CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          218 GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       218 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                          .+.+..+++++||.+.|+          +|+++. .+++++++++++|++++
T Consensus       367 ----~~~~~~~l~~~gv~v~~~----------~Ris~~~~~~~~i~~~~~~l~~~l  408 (412)
T 1ajs_A          367 ----PKQVEYLINQKHIYLLPS----------GRINMCGLTTKNLDYVATSIHEAV  408 (412)
T ss_dssp             ----HHHHHHHHHTTCEECCTT----------SEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHhCCEEecCC----------cEEEeeeCCHHHHHHHHHHHHHHH
Confidence                466777888889999763          599987 48999999999998763

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=100.00  E-value=2.5e-36  Score=261.00  Aligned_cols=260  Identities=16%  Similarity=0.241  Sum_probs=206.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCC-CcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGN-NFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~-~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..|.+. +...+...| +++.+|.++++ +|.+|++.+      ++++++++++||||||.+++.+++++|+++|
T Consensus       114 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~  193 (392)
T 3b1d_A          114 EAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLC  193 (392)
Confidence            56777666555 777778888 99999986433 355564432      5788999999999999999999999999999


Q ss_pred             HHcCCEEEEcccCCccccCCC-CCCccccCCC-CCceEEEecCccccCCCccceeEEEeccc-ccccCCcchHHHHHhhh
Q 036024           75 RNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGA-REVAIEISSFSKFSGFTGVRLGWTVVPEE-LLFSSGFPVINDFNRII  151 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~-~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-~~~~~~~~~~~~~~~~~  151 (272)
                      +++|+++|+||+|.++.+++. ..++..+... .+++++++|+||.+|++|+|+||++++++ +        ++.+....
T Consensus       194 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--------~~~~~~~~  265 (392)
T 3b1d_A          194 QKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTL--------CAQFKHQQ  265 (392)
Confidence            999999999999999887653 3344444322 56789999999999999999999999765 5        44454444


Q ss_pred             hhcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEecCCCceEEEeecCC--CChHHHHH
Q 036024          152 CTCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-L-GIKVYGGINAPYVWAHFPG--RKSWDVFA  226 (272)
Q Consensus       152 ~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~i~l~~--~~~~~~~~  226 (272)
                      .... .+.+.++|.++.+++.. ..++++++++.++++++.+.+.|++ + ++.+..+++++++|+.++.  .+..++..
T Consensus       266 ~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  344 (392)
T 3b1d_A          266 LVNNHHEVSSLGYIATETAYRY-GKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALFT  344 (392)
Confidence            3332 34678888888888874 3467889999999999999999987 5 8888888888888999874  35566777


Q ss_pred             HHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          227 EILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .|++++||.+.||..|++.+++++|+++..+++++++++++|++++
T Consensus       345 ~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l  390 (392)
T 3b1d_A          345 LLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCL  390 (392)
Confidence            7776679999999999866678999999888899999999998764

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=100.00  E-value=5.2e-32  Score=231.30  Aligned_cols=243  Identities=19%  Similarity=0.262  Sum_probs=191.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII   81 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v   81 (272)
                      |.|++..|.+. +...++..| +++.+|.+++..+ .++.+..+++++++++|+||||.+++.   ++|.++|+++|+++
T Consensus       107 d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~-~~l~~~~~~~~v~i~~p~nptG~~~~~---~~l~~l~~~~~~~l  182 (360)
T 3hdo_A          107 EEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRI-AGFPERYEGKVFFLTTPNAPLGPSFPL---EYIDELARRCAGML  182 (360)
T ss_dssp             CEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSB-TTCCSSBCSSEEEEESSCTTTCCCCCH---HHHHHHHHHBSSEE
T ss_pred             CEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCH-HHHHhhcCCCEEEEeCCCCCCCCCcCH---HHHHHHHHHCCCEE
Confidence            66777777665 778888889 9999999765444 234444567899999999999999995   55666778899999


Q ss_pred             EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024           82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI  161 (272)
Q Consensus        82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (272)
                      |+||+|.++...    +........+++++++|+||.+|++|+|+||+++++++        .+.+.....  ..+.+.+
T Consensus       183 i~De~~~~~~~~----~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~~~~~~~--~~~~~~~  248 (360)
T 3hdo_A          183 VLDETYAEFAES----NALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEV--------IAALDKIRD--HYNLDRL  248 (360)
T ss_dssp             EEECTTGGGSSC----CCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHH--------HHHHHHHSC--SCCSCHH
T ss_pred             EEECChHhhCCc----chhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHH--------HHHHHHhCC--CCCCCHH
Confidence            999999986322    12222223467899999999999999999999998777        566655443  3458899


Q ss_pred             HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024          162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG  241 (272)
Q Consensus       162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~  241 (272)
                      ++.++.++++.  .+++++.+++++++++++.+.|+++|+.+.++ .+.++|+.+++.+..++...|.+ +||.+.++..
T Consensus       249 ~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~  324 (360)
T 3hdo_A          249 AQAACVAALRD--QAYLSECCRRIRETREWFTTELRSIGYDVIPS-QGNYLFATPPDRDGKRVYDGLYA-RKVLVRHFSD  324 (360)
T ss_dssp             HHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHTTCEECCC-SSSEEEEECTTCCHHHHHHHHHH-TTEECBCCCS
T ss_pred             HHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEcCC-CccEEEEECCCCCHHHHHHHHHH-CCEEEEECCC
Confidence            99999999884  46778999999999999999999999888764 67889999887667777766654 5999999875


Q ss_pred             CCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          242 FGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       242 ~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                        +..++++|+++. +++++++++++|+++
T Consensus       325 --~~~~~~iRis~~-~~~e~~~l~~al~~~  351 (360)
T 3hdo_A          325 --PLLAHGMRISIG-TREEMEQTLAALKEI  351 (360)
T ss_dssp             --TTTTTSEEEECC-CHHHHHHHHHHHHHH
T ss_pred             --CCCCCEEEEEcC-CHHHHHHHHHHHHHH
Confidence              344689999986 889999999999864

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=1.5e-33  Score=247.65  Aligned_cols=253  Identities=16%  Similarity=0.145  Sum_probs=197.2

Q ss_pred             cccccccCccc-chHHhc----ccc-eeEEeecCCCC-CcccCCCCC--------CCceEEEEecCCCccccCCCHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVG----KYC-NIEYLECGPGN-NFFPDLKGT--------SRTDIIFFCSPNNPTGHAATQNQLE   68 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~----~~g-~~~~~~~~~~~-~~~~dl~~~--------~~~~~i~~~~p~nptG~~~~~~~l~   68 (272)
                      |.|++..|.+. +...++    ..| +++.+|....+ ++.+|++.+        ++++++++++||||||.+++.++++
T Consensus       146 d~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~  225 (448)
T 3meb_A          146 AEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWK  225 (448)
T ss_dssp             CCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHH
T ss_pred             CEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHH
Confidence            67888887776 778888    888 99999994343 566775442        3467778889999999999999999


Q ss_pred             HHHHHHHHcCCEEEEcccCCccccCCC---CCCccccCCCCCceEEEecCccccCCCccceeEE--Ee--------cccc
Q 036024           69 QLVEFARNNGSIIIFDSAYAAYVTDGC---PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWT--VV--------PEEL  135 (272)
Q Consensus        69 ~l~~~~~~~~~~vi~D~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~--~~--------~~~~  135 (272)
                      +|+++|+++|+++|+||+|+++.+++.   ..++..+....+++++++|+||.+|++|+|+||+  ++        +++.
T Consensus       226 ~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~  305 (448)
T 3meb_A          226 ELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA  305 (448)
T ss_dssp             HHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH
T ss_pred             HHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH
Confidence            999999999999999999999887651   2233333223567899999999999999999998  66        4431


Q ss_pred             cccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhC---C------C
Q 036024          136 LFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASL---G------I  201 (272)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~---g------~  201 (272)
                      .   ...+.+.+..........++.++|.++..++.+..     .+++++++++++++++.+.+.|+++   +      +
T Consensus       306 ~---~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~  382 (448)
T 3meb_A          306 L---SAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTW  382 (448)
T ss_dssp             H---HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCC
T ss_pred             H---HHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCccccc
Confidence            0   01125566655556666688899999999988543     1568899999999999999999987   3      5


Q ss_pred             eEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          202 KVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       202 ~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      .+..+++++|+|+.++    .+++..+++++||++.||+         .|+|++. +++++++++++|++++
T Consensus       383 ~~~~~~~g~~~~~~~~----~~~~~~ll~~~gV~v~~G~---------gRis~a~~~~~~i~~~~~~l~~~l  441 (448)
T 3meb_A          383 DHILTAIGMFTFTGLT----PEHVDYLKEKWSIYLVKAG---------GRMSMCGLTESNCDYVAEAIHDAV  441 (448)
T ss_dssp             THHHHCCSSEEECCCC----HHHHHHHHHHHCEEECSGG---------GEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             ceeCCCceEEEecCCC----HHHHHHHHHhCCEEEeCCC---------cEEEEecCCHHHHHHHHHHHHHHH
Confidence            5667788999998874    4778888888899999875         2999866 8888999999998763

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=1.9e-33  Score=243.63  Aligned_cols=253  Identities=13%  Similarity=0.096  Sum_probs=193.7

Q ss_pred             cccccccCccc-chHHhcccc-ee-EEeecCCCCCcccCCCC--------CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NI-EYLECGPGNNFFPDLKG--------TSRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~-~~~~~~~~~~~~~dl~~--------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..|+|. |...++..| +. ..++......+.+|.+.        .++++++++++||||||.+++.+++++|++
T Consensus       138 d~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~  217 (420)
T 4h51_A          138 TPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIAS  217 (420)
T ss_dssp             SCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHH
T ss_pred             CEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence            67899999998 888899988 64 44555444455555322        356677777899999999999999999999


Q ss_pred             HHHHcCCEEEEcccCCccccCCCCC---CccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024           73 FARNNGSIIIFDSAYAAYVTDGCPR---SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR  149 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~  149 (272)
                      +|+++++++|+|++|.++.+++...   .+.......++++++.||||.++++|+|+||++++.+.... ..++..++..
T Consensus       218 ~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~  296 (420)
T 4h51_A          218 LMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK-RADVKSVMDS  296 (420)
T ss_dssp             HHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH-HHHHHHHHHH
T ss_pred             HHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHH-HHHHHHHHHH
Confidence            9999999999999999998875321   12222233467899999999999999999999998776321 2223444555


Q ss_pred             hhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCCC
Q 036024          150 IICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGRK  220 (272)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~~  220 (272)
                      ........++..+|.++..++.+..     .++++.++++++++++.+.+.|.++|    |.+..++.|+|.|+.+.   
T Consensus       297 ~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls---  373 (420)
T 4h51_A          297 LIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS---  373 (420)
T ss_dssp             HHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC---
T ss_pred             hhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC---
Confidence            5566677788999998888887543     25688899999999999999999985    45556778999998764   


Q ss_pred             hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       221 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      . +.++ +|+++||++.|+.          |||++. ++++++++.++|.+++
T Consensus       374 ~-e~v~-~L~e~~Vy~~~~g----------Ris~Agl~~~ni~~~a~aI~~vv  414 (420)
T 4h51_A          374 K-AQCE-YCQNHNIFITVSG----------RANMAGLTHETALMLAQTINDAV  414 (420)
T ss_dssp             H-HHHH-HHHHTTEECCTTC----------EEEGGGCCHHHHHHHHHHHHHHH
T ss_pred             H-HHHH-HHHhCCEEEcCCC----------EEEeccCCHHHHHHHHHHHHHHH
Confidence            2 4454 5577899997642          999864 8999999999998763

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=100.00  E-value=1.1e-33  Score=244.50  Aligned_cols=251  Identities=14%  Similarity=0.176  Sum_probs=191.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-------C-CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-------T-SRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-------~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|.+. |...++..| +++.+|.++++++.+|++.       . ++++++++++||||||.+++.+++++|+++
T Consensus       121 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~  200 (396)
T 2q7w_A          121 KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQL  200 (396)
T ss_dssp             CEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHH
T ss_pred             CEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence            56777776665 888888888 9999998643355556333       1 246778888999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCC--CCCCccccCCCCCceEEEecCccccCCCccceeEEEe---cccccccCCcchHHHHH
Q 036024           74 ARNNGSIIIFDSAYAAYVTDG--CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV---PEELLFSSGFPVINDFN  148 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~---~~~~~~~~~~~~~~~~~  148 (272)
                      |+++|+++|+||+|.++.+++  ...++..+....+++++++|+||.+|++|+|+||+++   +++.+.    .+.+.+.
T Consensus       201 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~----~~~~~~~  276 (396)
T 2q7w_A          201 SVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVD----RAFSQMK  276 (396)
T ss_dssp             HHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHH----HHHHHHH
T ss_pred             HHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHH----HHHHHHH
Confidence            999999999999999887753  2234443432346789999999999999999999987   342210    1144444


Q ss_pred             hhhhhccCCcchHHHHHHHHhcccc----c-HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCC
Q 036024          149 RIICTCFNGASNIAQAGGLACLSSE----G-LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGR  219 (272)
Q Consensus       149 ~~~~~~~~~~~~~~~~a~~~~l~~~----~-~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~  219 (272)
                      ........+++.++|.++.++++..    . .+++++.+++++++++.+.+.|++++    +++..+++++++|+.++  
T Consensus       277 ~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--  354 (396)
T 2q7w_A          277 AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT--  354 (396)
T ss_dssp             HHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCC--
T ss_pred             HHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCC--
Confidence            3333444456889999999888754    1 36778899999999999999999986    77777788999998774  


Q ss_pred             ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                        .+.+.++++++||.+.||          +|+++.. +++++++++++|++++
T Consensus       355 --~~~~~~~l~~~gv~v~~~----------~Ris~~~~~~e~i~~~~~~l~~~l  396 (396)
T 2q7w_A          355 --KEQVLRLREEFGVYAVAS----------GRVNVAGMTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             --HHHHHHHHHHHCEECCTT----------CEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred             --HHHHHHHHHhcCeeecCC----------ceEEEeecCHHHHHHHHHHHHhcC
Confidence              245667777779999763          6999864 8999999999999875

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=100.00  E-value=2.9e-32  Score=230.70  Aligned_cols=236  Identities=19%  Similarity=0.242  Sum_probs=184.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII   81 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v   81 (272)
                      |.|++. |.+. +...++..| +++.+|.++  ++.+|++.+++++++++++||||||.+++.+++++|+++|   + ++
T Consensus        98 d~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~---~-~l  170 (335)
T 1uu1_A           98 RSVFFP-PTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTG---A-FV  170 (335)
T ss_dssp             EEEECS-SSCHHHHHHHHHHTCEEEECCCCT--TSCCCCCCCCTTEEEEEESSCTTTCCCCCHHHHHHHHHTT---C-EE
T ss_pred             CcEEEC-CCcHHHHHHHHHcCCeEEEeccCC--CCCCCHHHcCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhC---C-EE
Confidence            566777 5444 777788888 999998863  4566766667899999999999999999988888888877   7 89


Q ss_pred             EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024           82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI  161 (272)
Q Consensus        82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (272)
                      |+||+|.++...    +.....+..+++++++|+||.+|++|+|+||+++++++        ++.+.....  ..+.+.+
T Consensus       171 i~De~~~~~~~~----~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~--------~~~l~~~~~--~~~~~~~  236 (335)
T 1uu1_A          171 ALDEAYYEFHGE----SYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKF--------IDAYNRVRL--PFNVSYV  236 (335)
T ss_dssp             EEECTTHHHHCC----CCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHH--------HHHHHHHSC--TTCSCHH
T ss_pred             EEECcchhhcch----hHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHH--------HHHHHHhcC--CCCcCHH
Confidence            999999976532    22222123467899999999999999999999998777        555554433  2468899


Q ss_pred             HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024          162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG  241 (272)
Q Consensus       162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~  241 (272)
                      +|.++.++++.  .++.++.+++++++++++.+.|+++|+.+.+ .+++|+|+.++..+..++...|.++ ||.+.|   
T Consensus       237 ~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~---  309 (335)
T 1uu1_A          237 SQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITD-SRGNFVFVFMEKEEKERLLEHLRTK-NVAVRS---  309 (335)
T ss_dssp             HHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHHTCCBCC-CCSSEEEEECCTHHHHHHHHHHHHH-TEEEEE---
T ss_pred             HHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCcEEcC-CCCeEEEEECCCCCHHHHHHHHHHC-CEEEEE---
Confidence            99999999875  3567889999999999999999988887654 4688999999753345666666655 999988   


Q ss_pred             CCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          242 FGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       242 ~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                          ..+++|+++. +++++++++++|++++
T Consensus       310 ----~~~~iRis~~-~~~~i~~~~~~l~~~~  335 (335)
T 1uu1_A          310 ----FREGVRITIG-KREENDMILRELEVFK  335 (335)
T ss_dssp             ----ETTEEEEECC-CHHHHHHHHHHHHCC-
T ss_pred             ----CCCeEEEEeC-CHHHHHHHHHHHHhhC
Confidence                2478999984 5688999999998764

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=100.00  E-value=3.6e-32  Score=238.52  Aligned_cols=242  Identities=18%  Similarity=0.303  Sum_probs=186.3

Q ss_pred             hcccc-eeEEeecCCCCC---cccC---CCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 036024           19 VGKYC-NIEYLECGPGNN---FFPD---LKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSA   86 (272)
Q Consensus        19 ~~~~g-~~~~~~~~~~~~---~~~d---l~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~   86 (272)
                      +...| .+++++.+.+++   +.+|   +++     .++++++++++||||||.+++.+++++|+++|+++|+++|+||+
T Consensus       168 ~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~  247 (444)
T 3if2_A          168 FAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNA  247 (444)
T ss_dssp             EEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred             hhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECC
Confidence            45567 888888875322   4455   332     36789999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHH
Q 036024           87 YAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGG  166 (272)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  166 (272)
                      |+.+..........  ....+++++++|+||. +++|+|+||+++++++        .+.+.........+++.+.|.++
T Consensus       248 ~~~~~~~~~~~~~~--~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~l--------~~~~~~~~~~~~~~~~~~~~~a~  316 (444)
T 3if2_A          248 YGMPFPNIIYSDAH--LNWDNNTILCFSLSKI-GLPGMRTGIIVADAKV--------IEAVSAMNAVVNLAPTRFGAAIA  316 (444)
T ss_dssp             TCTTTTCCBCSCCC--CCCCTTEEEEEESTTT-TCGGGCCEEEECCHHH--------HHHHHHHHHHHHSSCCCHHHHHH
T ss_pred             CCCccccccccccc--ccCCCCEEEEechhhc-cCCCCceEEEEECHHH--------HHHHHHHHHhccCCCChHHHHHH
Confidence            98533221111111  1235678999999997 6799999999998887        66777666666666888999999


Q ss_pred             HHhcccccH-HHHHH-HHHHHHHHHHHHHHHHHhC----CCeEecCCCceEEEeecCC--CChHHHHHHHHHhcCeEeeC
Q 036024          167 LACLSSEGL-EAVHS-VVDYYKENTKILIDTLASL----GIKVYGGINAPYVWAHFPG--RKSWDVFAEILEKTHITTVP  238 (272)
Q Consensus       167 ~~~l~~~~~-~~~~~-~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~i~l~~--~~~~~~~~~ll~~~gi~v~~  238 (272)
                      .+++..... ++..+ +++.++++++.+.+.|.+.    ++.+..+++++++|+.++.  .+..++...| +++||.+.|
T Consensus       317 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~  395 (444)
T 3if2_A          317 TPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERL-KAKGTLIVP  395 (444)
T ss_dssp             HHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHH-HHTTEECEE
T ss_pred             HHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHH-HHCCeEEec
Confidence            998885443 44444 6788899998888888763    5778878889999999984  4566666666 556999999


Q ss_pred             CCCCCCCC--------CCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          239 GSGFGPGG--------EEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       239 g~~~~~~~--------~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      |+.|+...        .+++|+++..+++++++++++|++++
T Consensus       396 g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~  437 (444)
T 3if2_A          396 SEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVV  437 (444)
T ss_dssp             GGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHH
T ss_pred             chhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence            99986432        36899999779999999999998763

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.5e-31  Score=224.89  Aligned_cols=241  Identities=23%  Similarity=0.258  Sum_probs=182.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI   80 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~   80 (272)
                      |.|++..|.+. +...++..| +++.+|++++.++.++ +++..+++++++++||||||.+++.+++   .++|++++. 
T Consensus        91 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l---~~l~~~~~~-  166 (337)
T 3p1t_A           91 MRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQALSAGEL---DQLRQRAGK-  166 (337)
T ss_dssp             SEEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTCCTTEEEEEESSCTTTCCCCCHHHH---HHHHHHCSE-
T ss_pred             CeEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCCCHHHH---HHHHHhCCc-
Confidence            56777776666 888888899 9999999765444444 5555788999999999999999995555   555667776 


Q ss_pred             EEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcch
Q 036024           81 IIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN  160 (272)
Q Consensus        81 vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (272)
                      +|+||+|.++...+. ..    ....+++++++|+||.+|++|+|+||+++++++        ++.+.....  ..+.+.
T Consensus       167 ~ivDea~~~~~~~~~-~~----~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~--------~~~l~~~~~--~~~~~~  231 (337)
T 3p1t_A          167 LLIDETYVDYSSFRA-RG----LAYGENELVFRSFSKSYGLAGLRLGALFGPSEL--------IAAMKRKQW--FCNVGT  231 (337)
T ss_dssp             EEEECTTGGGSSCSS-SC----CCCBTTEEEEEESSSTTCCTTTCCEEEECCHHH--------HHHHHTTSC--TTCSCH
T ss_pred             EEEECCChhhccccc-cc----cccCCCEEEEeeCchhccCcchheEEEEeCHHH--------HHHHHhhcC--CCCCCH
Confidence            666999998664432 11    123467799999999999999999999998887        556654432  345788


Q ss_pred             HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCC
Q 036024          161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS  240 (272)
Q Consensus       161 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~  240 (272)
                      +.+.++.++++..  .+.++.++++.++++.+.+.|+++|+++.++ .+.|+|+..+.  ..++ .++++++||.+.||+
T Consensus       232 ~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~--~~~~-~~~l~~~gi~v~~g~  305 (337)
T 3p1t_A          232 LDLHALEAALDND--RAREAHIAKTLAQRRRVADALRGLGYRVASS-EANFVLVENAA--GERT-LRFLRERGIQVKDAG  305 (337)
T ss_dssp             HHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCC-SSSEEEEECTT--THHH-HHHHHHTTEECEEGG
T ss_pred             HHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHCcCEECCC-CCeEEEEEcCC--HHHH-HHHHHHCCeEEEECc
Confidence            8898888888742  3346677778888999999999999888776 56677777763  3344 445566699999999


Q ss_pred             CCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          241 GFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       241 ~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .|+.  ++++|+|+. +++++++++++|++++
T Consensus       306 ~~~~--~~~iRis~~-~~~~~~~l~~al~~~~  334 (337)
T 3p1t_A          306 QFGL--HHHIRISIG-REEDNDRLLAALAEYS  334 (337)
T ss_dssp             GGTC--CSEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred             cCCC--CCeEEEecC-CHHHHHHHHHHHHHHh
Confidence            9875  579999986 7889999999988753

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=100.00  E-value=7.6e-33  Score=240.63  Aligned_cols=249  Identities=16%  Similarity=0.159  Sum_probs=189.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeec-CCCCCcccCCCCC-------CCceEEEE-ecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLEC-GPGNNFFPDLKGT-------SRTDIIFF-CSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~-~~~~~~~~dl~~~-------~~~~~i~~-~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..|.+. |...++..| +++.+|. +++ ++.+|++.+       ++.+++++ ++||||||.+++.+++++|++
T Consensus       125 d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~  203 (412)
T 1yaa_A          125 KLVYLSKPTWANHMAIFENQGLKTATYPYWANE-TKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVD  203 (412)
T ss_dssp             CCEEEEESCCTTHHHHHHTTTCCEEEEECEETT-TTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred             CEEEEeCCCCccHHHHHHHcCceEEEEeeecCC-CCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence            56777776655 888888889 9999998 433 455664431       22345554 899999999999999999999


Q ss_pred             HHHHcCCEEEEcccCCccccCC---CCCCccccCCCCC---ceEEEecCccccCCCccceeEEE--e-----cccccccC
Q 036024           73 FARNNGSIIIFDSAYAAYVTDG---CPRSIYEIPGARE---VAIEISSFSKFSGFTGVRLGWTV--V-----PEELLFSS  139 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~---~~~~~~~~~~~~~---~~i~~~s~sK~~g~~g~r~G~~~--~-----~~~~~~~~  139 (272)
                      +|+++|+++|+||+|.++.+++   ...++..+....+   ++++++|+||.+|.+|+|+||++  +     +++..   
T Consensus       204 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~---  280 (412)
T 1yaa_A          204 AIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIK---  280 (412)
T ss_dssp             HHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHH---
T ss_pred             HHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHH---
Confidence            9999999999999999887764   2233433322233   78999999999997799999998  6     44410   


Q ss_pred             CcchHHHHHhhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCce
Q 036024          140 GFPVINDFNRIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAP  210 (272)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~  210 (272)
                       ..+++.+.........+++.++|.++.+++....     .+++++++++++++++++.+.|++++    +++..+++++
T Consensus       281 -~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~  359 (412)
T 1yaa_A          281 -PAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGM  359 (412)
T ss_dssp             -HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSS
T ss_pred             -HHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceE
Confidence             0115555554444555568899999999988553     35789999999999999999999876    8887888899


Q ss_pred             EEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHh
Q 036024          211 YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEAL  271 (272)
Q Consensus       211 ~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~  271 (272)
                      ++|+.++   . +.+.++++++||.+.+          ++|+++.. +++++++++++|+++
T Consensus       360 ~~~~~~~---~-~~~~~~l~~~gi~v~~----------~~Ris~~~~~~~~i~~~~~~l~~~  407 (412)
T 1yaa_A          360 FSFTGLT---P-QMVKRLEETHAVYLVA----------SGRASIAGLNQGNVEYVAKAIDEV  407 (412)
T ss_dssp             EEECCCC---H-HHHHHHHHHHCEECCT----------TSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             EEeeCCC---H-HHHHHHHHhCCEEecc----------CcEEEEccCCHhHHHHHHHHHHHH
Confidence            9998663   3 3457778777999975          47999864 889999999998875

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=99.98  E-value=9.1e-33  Score=238.65  Aligned_cols=250  Identities=13%  Similarity=0.043  Sum_probs=188.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC--------CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT--------SRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~--------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|.+. |...++..| +++.+|.++++++.+|++.+        ++++++++++||||||.+++.+++++|+++
T Consensus       118 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~  197 (394)
T 2ay1_A          118 LRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASI  197 (394)
T ss_dssp             CCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHH
T ss_pred             CEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence            56777776665 777888888 99999986434555663331        235667778999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCC--CCCCccccCCCCCceEEEecCccccCCCccceeEEEe---cccccccCCcchHHHHH
Q 036024           74 ARNNGSIIIFDSAYAAYVTDG--CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV---PEELLFSSGFPVINDFN  148 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~---~~~~~~~~~~~~~~~~~  148 (272)
                      |+++|+++|+||+|.++.+++  ...++..+....+++++++|+||.+|++|+|+||+++   +++.+.    ++...+.
T Consensus       198 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~----~l~~~~~  273 (394)
T 2ay1_A          198 LEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRE----LAQGAMA  273 (394)
T ss_dssp             HHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHH----HHHHHHH
T ss_pred             HHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHH----HHHHHHH
Confidence            999999999999999887653  1223333322345689999999999999999999998   444311    1123333


Q ss_pred             hhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCC
Q 036024          149 RIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGR  219 (272)
Q Consensus       149 ~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~  219 (272)
                      ......+.+++.++|.++.++++...     .++.++++++++++++++.+.|++++    +++..+.+|+|+|+.++. 
T Consensus       274 ~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~-  352 (394)
T 2ay1_A          274 FLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGATP-  352 (394)
T ss_dssp             HHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCCH-
T ss_pred             HHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCCH-
Confidence            33334444468899998888887541     25788999999999999999998874    777777789999987752 


Q ss_pred             ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHh
Q 036024          220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEAL  271 (272)
Q Consensus       220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~  271 (272)
                         +.+.++++++||.+.||          +|+++. .+++++++++++|+++
T Consensus       353 ---~~~~~~l~~~gi~v~~~----------~Ris~~~~~~~~i~~~~~~l~~~  392 (394)
T 2ay1_A          353 ---EQVKRIKEEFGIYMVGD----------SRINIAGLNDNTIPILARAIIEV  392 (394)
T ss_dssp             ---HHHHHHHHHHCEECCTT----------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             ---HHHHHHHHhCCEEecCC----------CeEEeecCCHhhHHHHHHHHHHc
Confidence               45667777779999763          599985 4899999999999875

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=99.97  E-value=2.4e-30  Score=221.72  Aligned_cols=239  Identities=18%  Similarity=0.182  Sum_probs=184.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..|.+. +...++..| +++.+|.+.  ++.+|++.+     + +++++++++||||||.+++.+++.+|++   
T Consensus       117 d~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~---  191 (369)
T 3cq5_A          117 RTALGFQPSYSMHPILAKGTHTEFIAVSRGA--DFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIIN---  191 (369)
T ss_dssp             CEEEEEESSCTHHHHHHHHTTCEEEEEECCT--TSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHH---
T ss_pred             CEEEEcCCChHHHHHHHHHcCCEEEEecCCc--CCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHH---
Confidence            56777766555 777788888 999999763  345554432     3 7899999999999999999666655555   


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCC-ceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGARE-VAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      .+++++|+||+|.++..+   .+........+ ++++++|+||.+|++|+|+||+++++++        .+.+.....  
T Consensus       192 ~~~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--------~~~l~~~~~--  258 (369)
T 3cq5_A          192 VAPGIVIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAF--------IDAVMLVRL--  258 (369)
T ss_dssp             HCSSEEEEECTTGGGCCS---CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHH--------HHHHHTTSC--
T ss_pred             hCCCEEEEECCchhhcCC---cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHH--------HHHHHHcCC--
Confidence            556999999999987643   23333322334 7899999999999899999999998876        555554433  


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCe
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHI  234 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi  234 (272)
                      ..+.+.+.+.++.++++.  .+++++.+++++++++.+.+.|++.|+++.+ ..++++|+.++ .+..++...|. ++||
T Consensus       259 ~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~-~~~~~l~~~l~-~~gi  333 (369)
T 3cq5_A          259 PYHLSALSQAAAIVALRH--SADTLGTVEKLSVERVRVAARLEELGYAVVP-SESNFVFFGDF-SDQHAAWQAFL-DRGV  333 (369)
T ss_dssp             TTCSCHHHHHHHHHHHHT--HHHHHTHHHHHHHHHHHHHHHHHHHTCEEEC-CSSSEEEEECC-SSHHHHHHHHH-HTTE
T ss_pred             CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCEECC-CCCeEEEEECC-CCHHHHHHHHH-HCCE
Confidence            234888999988888874  3567889999999999999999988988875 46789999987 35566666664 5599


Q ss_pred             EeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          235 TTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      .+.||.     .++++|+++. +++++++++++|+++
T Consensus       334 ~v~~~~-----~~~~iRis~~-~~~~i~~~~~~l~~~  364 (369)
T 3cq5_A          334 LIRDVG-----IAGHLRTTIG-VPEENDAFLDAAAEI  364 (369)
T ss_dssp             ECBCCS-----CTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred             EEEECC-----CCCeEEEEeC-CHHHHHHHHHHHHHH
Confidence            999871     2578999986 789999999999875

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=99.97  E-value=9.4e-31  Score=228.39  Aligned_cols=239  Identities=17%  Similarity=0.223  Sum_probs=184.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII   81 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v   81 (272)
                      |.|++..|++. |...++..| +++...++.+ .+.-.+  .+++|++++++||||||.+++ +.       ++  ++..
T Consensus       156 d~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l~~~~--~~~~k~v~l~~p~NPtG~~~~-~~-------l~--~~~~  222 (427)
T 2hox_A          156 SKVVAHAPFYPVFREQTKYFDKKGYVWAGNAA-NYVNVS--NPEQYIEMVTSPNNPEGLLRH-AV-------IK--GCKS  222 (427)
T ss_dssp             EEEEECSSCCHHHHHHHHHSCBTTEEEEEEGG-GGTTCS--CGGGEEEEEESSCTTTCCCCC-CS-------ST--TCEE
T ss_pred             CEEEEeCCCcccHHHHHHHcCCeeeeecCCHH-HHHHhh--cCCceEEEEcCCCCCcccccH-HH-------Hc--CCCE
Confidence            67888887776 888888888 7776554332 111111  257899999999999999999 42       22  5667


Q ss_pred             EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhhhhccCCcch
Q 036024           82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIICTCFNGASN  160 (272)
Q Consensus        82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (272)
                      +.|+.|.+    + ..++..+.  .+++++++||||.+|++|+|+||++++ +++        ++.+.........+++.
T Consensus       223 i~d~~~~~----~-~~s~~~~~--~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l--------~~~l~~~~~~~~~~~~~  287 (427)
T 2hox_A          223 IYDMVYYW----P-HYTPIKYK--ADEDILLFTMSKFTGHSGSRFGWALIKDESV--------YNNLLNYMTKNTEGTPR  287 (427)
T ss_dssp             EEECTTCS----T-TTSCCCSC--BCCSEEEEEHHHHTSCGGGCCEEEEECCHHH--------HHHHHHHHHHHTSSCCH
T ss_pred             EEeecccC----C-CCCccccC--CCceEEEEeChhcCCCCCceEEEEEECCHHH--------HHHHHHHHHhcCCCCCH
Confidence            88887753    1 23333442  567899999999999999999999995 555        67777776666666899


Q ss_pred             HHHHHHHHhcccc----------cHHHHHHHHHHHHHHHHHHHHHHHhC-CCeE--------------ecCCCceEEEee
Q 036024          161 IAQAGGLACLSSE----------GLEAVHSVVDYYKENTKILIDTLASL-GIKV--------------YGGINAPYVWAH  215 (272)
Q Consensus       161 ~~~~a~~~~l~~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--------------~~~~~~~~~~i~  215 (272)
                      +.|.++..++.+.          ..+++++.++.++++++.+.+.|+++ |+.+              ..|++++|+|++
T Consensus       288 ~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~  367 (427)
T 2hox_A          288 ETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVK  367 (427)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEE
T ss_pred             HHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEE
Confidence            9999998888753          23567888999999999999999987 6654              245579999999


Q ss_pred             cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          216 FPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       216 l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++. +..+++..+++++||.+.||+.|+. +++++|+|+..+++++++++++|++++
T Consensus       368 ~~~-~~~~~~~~ll~~~gI~v~pg~~f~~-~~~~~Ris~~~~~e~l~~~l~~l~~~~  422 (427)
T 2hox_A          368 CEW-EEDKDCYQTFQNGRINTQNGVGFEA-SSRYVRLSLIKTQDDFDQLMYYLKDMV  422 (427)
T ss_dssp             ECS-GGGCSHHHHHHHTTEECEEGGGGTS-CTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred             CCC-cHHHHHHHHHHHCCEEEcCCCccCC-CCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            975 4456778888777999999999976 678999999889999999999998763

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.97  E-value=1.3e-29  Score=219.13  Aligned_cols=250  Identities=15%  Similarity=0.123  Sum_probs=183.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCC--CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTS--RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      |.|++..|++. +...++..| +++.+|......+.--++...  +++++++++|+||||.+++   +++|+++|+++|+
T Consensus       128 d~V~~~~p~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~---~~~l~~~~~~~~~  204 (398)
T 3a2b_A          128 DYILLDERDHASIIDGSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN---LPELTSIANEFDA  204 (398)
T ss_dssp             CEEEEETTCCHHHHHHHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC---HHHHHHHHHHHTC
T ss_pred             CEEEECCccCHHHHHHHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccC---HHHHHHHHHHcCc
Confidence            56777777666 777778888 999888721101110022111  7899999999999999988   8999999999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCc-eEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh-hhhccCC
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREV-AIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI-ICTCFNG  157 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  157 (272)
                      ++|+||+|..+.++..+.++....+..++ .++++|+||.+|.+|   ||+++++++        ++.+... ......+
T Consensus       205 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~--------~~~l~~~~~~~~~~~  273 (398)
T 3a2b_A          205 AVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADV--------IDFLKHNARSVMFSA  273 (398)
T ss_dssp             EEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHH--------HHHHHHHCHHHHSSB
T ss_pred             EEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCHHH--------HHHHHHhcccceecC
Confidence            99999999877664333344333233344 599999999999768   999998877        5555543 2223333


Q ss_pred             cchHHHH-HHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeE
Q 036024          158 ASNIAQA-GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHIT  235 (272)
Q Consensus       158 ~~~~~~~-a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~  235 (272)
                      .+.+.|. ++.++++.  .++.++.+++++++++++.+.|+++|+++..+ .++++|+.++. .+..++...|+++ ||.
T Consensus       274 ~~~~~~~a~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~g~~~~~~~~~~~~~~~l~~~l~~~-gi~  349 (398)
T 3a2b_A          274 SMTPASVASTLKALEI--IQNEPEHIEKLWKNTDYAKAQLLDHGFDLGAT-ESPILPIFIRSNEKTFWVTKMLQDD-GVF  349 (398)
T ss_dssp             CCCHHHHHHHHHHHHH--HHHCTHHHHHHHHHHHHHHHHHHHTTCCBCSC-CSSEEEEECCCHHHHHHHHHHHHHT-TEE
T ss_pred             CCCHHHHHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHhcCCCcCCC-CCCEEEEEcCCHHHHHHHHHHHHHC-CcE
Confidence            4555565 45566654  24557889999999999999999989888765 47899999973 3455677777777 999


Q ss_pred             eeCCCCCCC-CCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024          236 TVPGSGFGP-GGEEYIRISGFG--HRESILEASRRLEAL  271 (272)
Q Consensus       236 v~~g~~~~~-~~~~~~R~s~~~--~~~~i~~~l~~l~~~  271 (272)
                      +.||..|+. .+.+++|+++..  +++++++++++|+++
T Consensus       350 v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~  388 (398)
T 3a2b_A          350 VNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKV  388 (398)
T ss_dssp             CEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             EEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            999998863 346899999864  999999999999875

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.96  E-value=3.4e-28  Score=209.87  Aligned_cols=246  Identities=18%  Similarity=0.182  Sum_probs=182.8

Q ss_pred             cccccccCcc-c--chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAG-D--LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~-~--~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..+.+ .  +...++..| +++.+|.+++  +.+|++.+     + +++++++++|+||||.+++   +++|+++
T Consensus       110 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l  184 (393)
T 1vjo_A          110 DVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWG--EVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGEL  184 (393)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHH
T ss_pred             CEEEEEcCChhHHHHHHHHHHcCCceEEEecCCC--CCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHH
Confidence            4566665544 3  666777788 9999999764  34453331     4 7899999999999999987   8899999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh---
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI---  150 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~---  150 (272)
                      |+++|+++|+||+|..   +..+..+..    .+..++++|+||.++.++ |+||++++++.        .+.+...   
T Consensus       185 ~~~~~~~li~Dea~~~---g~~~~~~~~----~~~di~~~s~sK~l~~~~-~~G~l~~~~~~--------~~~~~~~~~~  248 (393)
T 1vjo_A          185 CREFGTLLLVDTVTSL---GGVPIFLDA----WGVDLAYSCSQKGLGCSP-GASPFTMSSRA--------IEKLQRRRTK  248 (393)
T ss_dssp             HHHHTCEEEEECTTTT---TTSCCCTTT----TTCSEEECCSSSTTCSCS-SCEEEEECHHH--------HHHHHTCSSC
T ss_pred             HHHcCCEEEEECCccc---cCcCCcccc----cCccEEEEcCcccccCCC-ceEEEEECHHH--------HHHHhccCCC
Confidence            9999999999999982   221222211    234589999999998677 99999999877        3333211   


Q ss_pred             ----------------hhhccC-CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC---ce
Q 036024          151 ----------------ICTCFN-GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN---AP  210 (272)
Q Consensus       151 ----------------~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~  210 (272)
                                      ...... +.+.+.+.++.++++.....++++.+++++++++++.+.|+++|+++..+.+   +.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~  328 (393)
T 1vjo_A          249 VANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPT  328 (393)
T ss_dssp             CSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSS
T ss_pred             CCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCc
Confidence                            001222 5788888888888874333457889999999999999999988888877643   46


Q ss_pred             EEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc---cCCHHHHHHHHHHHHHhC
Q 036024          211 YVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG---FGHRESILEASRRLEALF  272 (272)
Q Consensus       211 ~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~---~~~~~~i~~~l~~l~~~l  272 (272)
                      ++++.++ +.+..++...|.+++||.+.||+.|..  .+++|+++   ..+++++++++++|++++
T Consensus       329 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~~~~~~~~~i~~~~~~l~~~l  392 (393)
T 1vjo_A          329 LTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELA--GKVWRVGLMGFNSRKESVDQLIPALEQVL  392 (393)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGT--TTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCCHHHHHHHHHhhCCEEEecCccccC--CCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence            7888886 456677777777777999999986643  68999994   346778999999998763

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.96  E-value=2.2e-27  Score=204.07  Aligned_cols=254  Identities=16%  Similarity=0.155  Sum_probs=183.6

Q ss_pred             cccccccCccc---chHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD---LEDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~---~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.+.   +...+...| +++.++.+++....++ +++    .++++++++++|+||||.+.+   +++|+++|
T Consensus        96 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~  172 (386)
T 2dr1_A           96 GKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVA  172 (386)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHH
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHH
Confidence            55666665553   666777788 9999998754223333 222    267899999999999999987   89999999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc--------chHHH
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF--------PVIND  146 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~--------~~~~~  146 (272)
                      +++|+++|+|++|..+...   .++..    .+..++++|+||.++.+ .++||++++++.+.....        .+...
T Consensus       173 ~~~~~~li~D~a~~~~~~~---~~~~~----~~~di~~~s~sK~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (386)
T 2dr1_A          173 KEHDKLVFVDAVSAMGGAD---IKFDK----WGLDVVFSSSQKAFGVP-PGLAIGAFSERFLEIAEKMPERGWYFDIPLY  244 (386)
T ss_dssp             HHTTCEEEEECTTTBTTBC---CCTTT----TTCSEEEEETTSTTCCC-SSCEEEEECHHHHHHHTTCTTCCSTTCHHHH
T ss_pred             HHcCCeEEEEccccccCcc---ccccc----cCCcEEEEeccccccCC-CceEEEEECHHHHHHHhcCCCCceEEeHHHH
Confidence            9999999999999865432   12222    23459999999999855 248999999876321000        00000


Q ss_pred             HHhh--hhhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CceEEEeecC-CC
Q 036024          147 FNRI--ICTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLGIKVYGGI---NAPYVWAHFP-GR  219 (272)
Q Consensus       147 ~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~i~l~-~~  219 (272)
                      +...  ......+.+...+.++.++++..... ++++.+++++++++++.+.|+++|+++..+.   .+.++|+.++ +.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~  324 (386)
T 2dr1_A          245 VKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPGI  324 (386)
T ss_dssp             HHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTTC
T ss_pred             HHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCCCC
Confidence            1111  12334457788888888877642222 3688999999999999999999888887764   3788999997 55


Q ss_pred             ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      +..++...|.++ ||.+.||..+.  ..+++|+++.  .+++++++++++|+++
T Consensus       325 ~~~~~~~~l~~~-gi~v~~~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~~~  375 (386)
T 2dr1_A          325 KGDEVYEAMRKR-GFELAKGYGSV--KEKTFRIGHMGYMKFEDIQEMLDNLREV  375 (386)
T ss_dssp             CHHHHHHHHHHT-TEECEECCGGG--TTTEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHC-CeEEecCcccc--CCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            667777777777 99999988543  3579999986  5999999999999875

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.96  E-value=2.6e-28  Score=210.88  Aligned_cols=253  Identities=18%  Similarity=0.142  Sum_probs=183.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC----CCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+++. +...++..| +++.+|......+.--++..    .+++++++++|+||||.+++   +++|+++|+++
T Consensus       128 d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~  204 (399)
T 3tqx_A          128 DAIISDELNHASIIDGIRLCKAQRYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD---LKSICDLADKY  204 (399)
T ss_dssp             CEEEEETTCCHHHHHHHHSCCSEEEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC---HHHHHHHHHHT
T ss_pred             CEEEECCcccHHHHHHHHHcCCceeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHc
Confidence            56777776666 777788888 89988863211111101111    17899999999999999999   89999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCC-CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh--hc
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC--TC  154 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~  154 (272)
                      |+++|+||+|+...++....++....+ ..+..++++|+||.+|  |++.||++++++.        ++.+.....  ..
T Consensus       205 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~~~~--------~~~~~~~~~~~~~  274 (399)
T 3tqx_A          205 NALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGHKEI--------IEWLRNRSRPYLF  274 (399)
T ss_dssp             TCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEECHHH--------HHHHHHHCHHHHS
T ss_pred             CCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcCHHH--------HHHHHHhCcceec
Confidence            999999999964333433333333322 2344599999999998  3344999999887        555544322  22


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC-ChHHHHHHHHHhcC
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTH  233 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~g  233 (272)
                      ..+.+...+.++.+.++... ++.++.+++++++++++.+.|+++|+++.++ .+.++|+.++.. +..++...|+++ |
T Consensus       275 ~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-g  351 (399)
T 3tqx_A          275 SNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKLGFQLVPG-NHPIIPVMLGDAQLATNMADHLLQE-G  351 (399)
T ss_dssp             SCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-SSSEEEEEEECHHHHHHHHHHHHHT-T
T ss_pred             cCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHcCCCcCCC-CCCEEEEEeCCHHHHHHHHHHHHHC-C
Confidence            33466677777777766322 5678899999999999999999999888754 677888888743 455677777665 9


Q ss_pred             eEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          234 ITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       234 i~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      |.+.|+..+. +.+.+++|+++.  .+++++++++++|++++
T Consensus       352 i~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~  393 (399)
T 3tqx_A          352 IYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVG  393 (399)
T ss_dssp             EECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             CEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHH
Confidence            9999876543 445679999984  69999999999998763

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.96  E-value=7.9e-28  Score=208.22  Aligned_cols=250  Identities=14%  Similarity=0.116  Sum_probs=179.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----C--CCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----T--SRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~--~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+. +...++..| +++.+|.+.   . .++++    .  ++++++++++|+||||.+++   +++|+++|+
T Consensus       133 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~d---~-~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~  205 (401)
T 2bwn_A          133 LIIYSDSLNHASMIEGIKRNAGPKRIFRHND---V-AHLRELIAADDPAAPKLIAFESVYSMDGDFGP---IKEICDIAE  205 (401)
T ss_dssp             CEEEEETTCCHHHHHHHHHSCCCEEEECTTC---H-HHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC---HHHHHHHHH
T ss_pred             CEEEECchhhHHHHHHHHHcCCeEEEEcCCC---H-HHHHHHHHhhccCCceEEEEecCcCCCCCcCC---HHHHHHHHH
Confidence            55666665554 666667778 999998751   1 11222    1  47899999999999999998   899999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCC-CCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh--
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGA-REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC--  152 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--  152 (272)
                      ++|+++|+||+|....+++...++....+. .+..++++|+||.+|.+|   ||+++++++        .+.+.....  
T Consensus       206 ~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~~~--------~~~l~~~~~~~  274 (401)
T 2bwn_A          206 EFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARM--------VDAVRSYAPGF  274 (401)
T ss_dssp             HHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHH--------HHHHHHHCHHH
T ss_pred             HcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCHHH--------HHHHHHhCcCc
Confidence            999999999999965544333333222111 234689999999999888   999998766        444433221  


Q ss_pred             hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHh
Q 036024          153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEK  231 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~  231 (272)
                      ....+.+.+.+.++.++++......+++.+++++++++++.+.|+++|+++.++. +.++|+.++. .+..++...|+++
T Consensus       275 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~  353 (401)
T 2bwn_A          275 IFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDHG-SHIVPVVIGDPVHTKAVSDMLLSD  353 (401)
T ss_dssp             HTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCS-SSCEEEECCCHHHHHHHHHHHHHH
T ss_pred             eecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCCCcccCCC-CCeEEEEeCChHHHHHHHHHHHhc
Confidence            1122244567766666665332234578889999999999999998888887764 4588999874 3445667777656


Q ss_pred             cCeEeeCCCCCCCC-CCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPG-GEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~-~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.|+..|+.. +.+++|+++.  .+++++++++++|++++
T Consensus       354 ~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~  397 (401)
T 2bwn_A          354 YGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLW  397 (401)
T ss_dssp             HCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred             CCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHH
Confidence            69999999877632 4578999975  58999999999998864

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.95  E-value=3.5e-27  Score=202.52  Aligned_cols=248  Identities=14%  Similarity=0.154  Sum_probs=174.2

Q ss_pred             cccccccCccc-chHHh---cccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEV---GKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~---~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..+.+. +....   +..| +++.+|.+++  +.+|++.     .++++++++++|+||||.+++   +++|.++
T Consensus        90 d~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l  164 (384)
T 1eg5_A           90 RTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSR--GVVKLEELEKLVDEDTFLVSIMAANNEVGTIQP---VEDVTRI  164 (384)
T ss_dssp             CEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTT--SCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC---HHHHHHH
T ss_pred             CEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCC--CccCHHHHHHHhCCCCeEEEEECCCCCcccccC---HHHHHHH
Confidence            56676666544 43433   5668 9999998754  4445332     257899999999999999999   7899999


Q ss_pred             HHHcC--CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHHHhh
Q 036024           74 ARNNG--SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNRI  150 (272)
Q Consensus        74 ~~~~~--~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~~  150 (272)
                      |++++  +++|+||+|..   +..+..+..+    +..+++.|+||.+|++|  +||++++++. +.....    .....
T Consensus       165 ~~~~~~~~~li~Dea~~~---~~~~~~~~~~----~~di~~~s~sK~~g~~G--~G~~~~~~~~~~~~~~~----~~~~~  231 (384)
T 1eg5_A          165 VKKKNKETLVHVDAVQTI---GKIPFSLEKL----EVDYASFSAHKFHGPKG--VGITYIRKGVPIRPLIH----GGGQE  231 (384)
T ss_dssp             HHHHCTTCEEEEECTTTT---TTSCCCCTTT----CCSEEEEEGGGGTSCTT--CEEEEECTTSCCCCSBC----SSCTT
T ss_pred             HHhcCCceEEEEEhhhhc---CCcccCchhc----CCCEEEecHHHhcCCCc--eEEEEEcCCCccccccc----cCccc
Confidence            99999  99999999972   2222222222    34589999999999778  7999998875 211110    00000


Q ss_pred             hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CceEEEeecCCCChHHHHHH
Q 036024          151 ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI---NAPYVWAHFPGRKSWDVFAE  227 (272)
Q Consensus       151 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~i~l~~~~~~~~~~~  227 (272)
                      ......+.+.+.+.++.++++. ..+++++.+++++++++++.+.|++.|+++..+.   .+.++++.+++.+..++...
T Consensus       232 ~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (384)
T 1eg5_A          232 RGLRSGTQNVPGIVGAARAMEI-AVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQNL  310 (384)
T ss_dssp             TTTBCSCCCHHHHHHHHHHHHH-HHHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHH
T ss_pred             ccccCCCCChHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEEEEeCCCCHHHHHHH
Confidence            1123445788888888888774 2356788999999999999999998888887653   23567777776566666666


Q ss_pred             HHHhcCeEeeCCCCCCCC-----------------CCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          228 ILEKTHITTVPGSGFGPG-----------------GEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~~-----------------~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      | .++||.+.+|..|++.                 +.+++|+++.  .+++++++++++|+++
T Consensus       311 l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  372 (384)
T 1eg5_A          311 L-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEI  372 (384)
T ss_dssp             H-HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             H-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence            6 4569999999877542                 1478999986  5999999999999875

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.95  E-value=1.1e-26  Score=197.24  Aligned_cols=251  Identities=12%  Similarity=0.036  Sum_probs=175.7

Q ss_pred             cccccccC-cccch--HHhcccc-eeEEeecCCCCCcccC-CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc-
Q 036024            4 DSSVIVGQ-AGDLE--DEVGKYC-NIEYLECGPGNNFFPD-LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN-   77 (272)
Q Consensus         4 d~~~~~~~-~~~~~--~~~~~~g-~~~~~~~~~~~~~~~d-l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-   77 (272)
                      |.|++..+ ++.+.  ..++..| +++.++.+++..+.+| +++ ++++++++++|+||||.+++   +++|.++|+++ 
T Consensus        76 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~  151 (352)
T 1iug_A           76 ERVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK-EGYAGLLLVHSETSTGALAD---LPALARAFKEKN  151 (352)
T ss_dssp             CEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC-SSCSEEEEESEETTTTEECC---HHHHHHHHHHHC
T ss_pred             CeEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc-cCCcEEEEEEecCCcceecC---HHHHHHHHHhhC
Confidence            55666665 33343  3445578 9999999765333443 444 68899999999999999998   78999999999 


Q ss_pred             -CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCc-----chHHHHHhh
Q 036024           78 -GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGF-----PVINDFNRI  150 (272)
Q Consensus        78 -~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~-----~~~~~~~~~  150 (272)
                       |+++|+|++|...   ..+..+...    +..++++|+||.+ |.+|  +||++++++.+.....     .+...+...
T Consensus       152 ~~~~li~D~a~~~~---~~~~~~~~~----~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (352)
T 1iug_A          152 PEGLVGADMVTSLL---VGEVALEAM----GVDAAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQ  222 (352)
T ss_dssp             TTCEEEEECTTTBT---TBCCCSGGG----TCSEEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHH
T ss_pred             CCCEEEEECCcccc---Ccceecccc----CeeEEEecCcccccCCCc--eeEEEECHHHHHHhhCCCceeeHHHHHhhc
Confidence             9999999999732   112222222    2348899999955 4334  7999998876321000     001111111


Q ss_pred             -hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC-CceEEEeecC-CCChHHHHHH
Q 036024          151 -ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-NAPYVWAHFP-GRKSWDVFAE  227 (272)
Q Consensus       151 -~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~i~l~-~~~~~~~~~~  227 (272)
                       ......+.+...+.++.+++.... +++++.+++++++++++.+.|+++|+++..+. .+.++|+.++ +.+..++...
T Consensus       223 ~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (352)
T 1iug_A          223 KEGESAWTPAINLVLAVAAVLEEVL-PRLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGVPYARVKEA  301 (352)
T ss_dssp             TTTCCSSCCCHHHHHHHHHHHHHHG-GGHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTTCCHHHHHHH
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCCCCCHHHHHHH
Confidence             122334566777776666665322 23688999999999999999998899888764 6788999997 5566777777


Q ss_pred             HHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          228 ILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      |.++ ||.+.+|..  +.+.+++|+++.  .+++++++++++|+++
T Consensus       302 l~~~-gi~v~~~~~--~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  344 (352)
T 1iug_A          302 FAQR-GAVIAGGQG--PLKGKVFRLSLMGAYDRYEALGVAGMFREV  344 (352)
T ss_dssp             HHTT-TEECEECCG--GGTTTEEEECCCSSCCHHHHHHHHHHHHHH
T ss_pred             HHHC-CEEEEeCCC--ccCCCEEEEEccccCCHHHHHHHHHHHHHH
Confidence            7666 999999873  234679999985  4799999999999875

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.95  E-value=1.9e-27  Score=204.58  Aligned_cols=251  Identities=9%  Similarity=0.020  Sum_probs=177.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSI   80 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~   80 (272)
                      |.|++..+++. +...++..| +++.+|......+.--++.. ++++++++++||||||.+++   +++|+++|+++|++
T Consensus       124 d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~  200 (384)
T 1bs0_A          124 DRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAP---LAEIQQVTQQHNGW  200 (384)
T ss_dssp             CEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCE
T ss_pred             cEEEEcccccHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccC---HHHHHHHHHHcCcE
Confidence            55666666665 666777788 88888853110111002222 24678888899999999998   88999999999999


Q ss_pred             EEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh--hhccCCc
Q 036024           81 IIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII--CTCFNGA  158 (272)
Q Consensus        81 vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  158 (272)
                      +|+||+|..+.++....++....+. +..++++|+||.+|.+|   ||+++++++        ++.+....  .....+.
T Consensus       201 li~De~~~~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~~~G---G~~~~~~~~--------~~~l~~~~~~~~~~~~~  268 (384)
T 1bs0_A          201 LMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCSSTV--------ADYLLQFARHLIYSTSM  268 (384)
T ss_dssp             EEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEECHHH--------HHHHHHHCHHHHSSBCC
T ss_pred             EEEECCcccceecCCCCchHHhcCC-CCcEEEeeccchhhccC---cEEEeCHHH--------HHHHHHhchhhhcCCCC
Confidence            9999999876543212222222111 12389999999999667   999998777        44444432  1122247


Q ss_pred             chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEee
Q 036024          159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTV  237 (272)
Q Consensus       159 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~  237 (272)
                      +.+.+.++.+.++.....+.++.+++++++++++.+.|+++|+++.+ ..++++|+.++. .+..++...|.++ ||.+.
T Consensus       269 ~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~-gi~v~  346 (384)
T 1bs0_A          269 PPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLAD-SCSAIQPLIVGDNSRALQLAEKLRQQ-GCWVT  346 (384)
T ss_dssp             CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECS-CCSSBCCEEEESHHHHHHHHHHHHHT-TEECC
T ss_pred             CHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCCEEEEEeCCHHHHHHHHHHHHHC-CcEEE
Confidence            77888777777763221156788999999999999999999988875 467788888863 2355667777666 99999


Q ss_pred             CCCCCC-CCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024          238 PGSGFG-PGGEEYIRISGFG--HRESILEASRRLEAL  271 (272)
Q Consensus       238 ~g~~~~-~~~~~~~R~s~~~--~~~~i~~~l~~l~~~  271 (272)
                      ++..|+ +.+.+++|+++..  +++++++++++|+++
T Consensus       347 ~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          347 AIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             EECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             eecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence            998776 3346789999753  899999999999875

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.95  E-value=2.8e-27  Score=206.57  Aligned_cols=251  Identities=14%  Similarity=0.177  Sum_probs=180.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-C-CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-S-RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      |.|++..+++. +...++..| +++.++...-..+.--++.. + ++++|++++++||||.+++   +++|+++|+++|+
T Consensus       149 d~vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~---l~~l~~l~~~~g~  225 (427)
T 2w8t_A          149 EYVILDADSHASIYDGCQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP---LKEMVAVAKKHGA  225 (427)
T ss_dssp             CEEEEETTCCHHHHHHHHHSCSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC---HHHHHHHHHHTTC
T ss_pred             CEEEECCcccHHHHHHHHHcCCeeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCC
Confidence            55666666655 666677778 88888742110110002211 1 7899999999999999998   8999999999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCC-CCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh--hhccC
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPG-AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII--CTCFN  156 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  156 (272)
                      ++|+||+|..+.++....++....+ .++..++++|+||.+|++|   ||++++++++        +.+....  .....
T Consensus       226 ~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~~l~--------~~l~~~~~~~~~~~  294 (427)
T 2w8t_A          226 MVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNHPKF--------EAVRLACRPYIFTA  294 (427)
T ss_dssp             EEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECCTTG--------GGGGGTCHHHHSSC
T ss_pred             EEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCHHHH--------HHHHHhcccccccC
Confidence            9999999998777643444443222 2345799999999999777   9999988773        3333321  11233


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC-CceEEEeecCC-CChHHHHHHHHHhcCe
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-NAPYVWAHFPG-RKSWDVFAEILEKTHI  234 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~i~l~~-~~~~~~~~~ll~~~gi  234 (272)
                      +.+...+.++.+.++...  +.++++++++++++++++.|+++|+.+..+. .+.++|+.+++ ....++...|+++ ||
T Consensus       295 ~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-Gi  371 (427)
T 2w8t_A          295 SLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAMGFRLGTETCDSAIVAVMLEDQEQAAMMWQALLDG-GL  371 (427)
T ss_dssp             CCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHHTCEESCSSCCSSEEEEEESSHHHHHHHHHHHHHT-TE
T ss_pred             CCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCCCEEEEEECCHHHHHHHHHHHHHC-Ce
Confidence            466666666656665322  2477889999999999999998898887434 67889999874 2345677777766 99


Q ss_pred             EeeCCCCCC-CCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024          235 TTVPGSGFG-PGGEEYIRISGFG--HRESILEASRRLEAL  271 (272)
Q Consensus       235 ~v~~g~~~~-~~~~~~~R~s~~~--~~~~i~~~l~~l~~~  271 (272)
                      .+.++..|+ +.+.+++|+++..  +++++++++++|+++
T Consensus       372 ~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~  411 (427)
T 2w8t_A          372 YVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAA  411 (427)
T ss_dssp             ECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             EEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            999998776 3346799999864  999999999999875

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.95  E-value=1.6e-27  Score=206.28  Aligned_cols=248  Identities=16%  Similarity=0.116  Sum_probs=177.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-C---CceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-S---RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+++. +...++..| +++.++......+.-.++.. +   +++++++++||||||.+++   +++|.++|+++
T Consensus       130 d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~  206 (401)
T 1fc4_A          130 DAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN---LKGVCDLADKY  206 (401)
T ss_dssp             CEEEEETTCCHHHHHHHHTSCSEEEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC---HHHHHHHHHHT
T ss_pred             CEEEEcchhHHHHHHHHHHcCCceEEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC---HHHHHHHHHHc
Confidence            55666666653 566677778 88888742110110001111 1   7899999999999999998   89999999999


Q ss_pred             CCEEEEcccCC-cccc-CCCCCCccc-cCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcchHHHHHhhh--
Q 036024           78 GSIIIFDSAYA-AYVT-DGCPRSIYE-IPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFPVINDFNRII--  151 (272)
Q Consensus        78 ~~~vi~D~~~~-~~~~-~~~~~~~~~-~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~--  151 (272)
                      |+++|+||+|+ ++.. .+..  ... ..-.++..++++|+||.+ |.+|   ||+++++++        ++.+....  
T Consensus       207 ~~~li~De~~~~g~~~~~g~~--~~~~~~~~~~~di~~~s~sK~~~~~~g---G~~~~~~~~--------~~~l~~~~~~  273 (401)
T 1fc4_A          207 DALVMVDDSHAVGFVGENGRG--SHEYCDVMGRVDIITGTLGKALGGASG---GYTAARKEV--------VEWLRQRSRP  273 (401)
T ss_dssp             TEEEEEECTTTTTTSSTTSCC--HHHHTTCTTCCSEEEEESSSTTCSSSC---EEEEECHHH--------HHHHHHHCHH
T ss_pred             CCEEEEECcccccccCCCCCc--cHHHcCCCcCCcEEEecchhhccCCCC---EEEEcCHHH--------HHHHHHhCcC
Confidence            99999999996 6653 2221  111 111224469999999999 5454   999998777        45554433  


Q ss_pred             hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHH
Q 036024          152 CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILE  230 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~  230 (272)
                      .....+.+.+.+.++.+.++...  ..++.+++++++++++.+.|+++|+++.+ ..++++|+.+++ .+..++...|.+
T Consensus       274 ~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~  350 (401)
T 1fc4_A          274 YLFSNSLAPAIVAASIKVLEMVE--AGSELRDRLWANARQFREQMSAAGFTLAG-ADHAIIPVMLGDAVVAQKFARELQK  350 (401)
T ss_dssp             HHHSCCCCHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHTTCCBCC-SSSSEEEEEEECHHHHHHHHHHHHH
T ss_pred             ceeCCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCcccC-CCCCEEEEEcCChHHHHHHHHHHHH
Confidence            11244578888888887776321  13678899999999999999998888774 578899999874 234566666666


Q ss_pred             hcCeEeeCCCCCCC-CCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          231 KTHITTVPGSGFGP-GGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       231 ~~gi~v~~g~~~~~-~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      + ||.+.++..|+. .+.+++|+++.  .+++++++++++|+++
T Consensus       351 ~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  393 (401)
T 1fc4_A          351 E-GIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRI  393 (401)
T ss_dssp             T-TEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             C-CcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            5 999999987763 34578999985  5899999999999875

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.95  E-value=3.5e-26  Score=197.76  Aligned_cols=245  Identities=18%  Similarity=0.216  Sum_probs=172.1

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..+.+.     |...++..| +++.+|.+++  +.+|++.     .+++++|++++|+||||.+++   +++|++
T Consensus       114 d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~  188 (406)
T 1kmj_A          114 DNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD--GTLQLETLPTLFDEKTRLLAITHVSNVLGTENP---LAEMIT  188 (406)
T ss_dssp             CEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTT--SCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCC---HHHHHH
T ss_pred             CEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCC--CCcCHHHHHHHhccCCeEEEEeCCCccccCcCC---HHHHHH
Confidence            55666665432     334456678 9999998754  4455443     267899999999999999999   899999


Q ss_pred             HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024           73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  152 (272)
                      +|+++|+++|+|++|..+..   +..+...    +..++++|+||.+|.+|  +||+++++++.        +.+.....
T Consensus       189 l~~~~~~~li~D~~~~~g~~---~~~~~~~----~~d~~~~s~~K~~g~~G--~G~~~~~~~~~--------~~~~~~~~  251 (406)
T 1kmj_A          189 LAHQHGAKVLVDGAQAVMHH---PVDVQAL----DCDFYVFSGHKLYGPTG--IGILYVKEALL--------QEMPPWEG  251 (406)
T ss_dssp             HHHHTTCEEEEECTTTTTTS---CCCHHHH----TCSEEEEEGGGTTSCTT--CEEEEECHHHH--------HHCCCSSC
T ss_pred             HHHHcCCEEEEEchhhcCCC---CCccccc----CCCEEEEEchhccCCCC--cEEEEEeHHHH--------hhcCCccc
Confidence            99999999999999986321   1222222    24589999999998777  89999988763        33322110


Q ss_pred             ---------------------hccCCcchHHHHHHH-HhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC-C
Q 036024          153 ---------------------TCFNGASNIAQAGGL-ACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI-N  208 (272)
Q Consensus       153 ---------------------~~~~~~~~~~~~a~~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~  208 (272)
                                           ....+++.+.+.++. +.++.....++++.+++++++++++.+.|+++ |+++..+. .
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  331 (406)
T 1kmj_A          252 GGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNR  331 (406)
T ss_dssp             STTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTC
T ss_pred             CCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCc
Confidence                                 111224555555444 44442222356788899999999999999998 88888762 3


Q ss_pred             ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCC------CCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024          209 APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGP------GGEEYIRISGFG--HRESILEASRRLEAL  271 (272)
Q Consensus       209 ~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~~R~s~~~--~~~~i~~~l~~l~~~  271 (272)
                      +.++++.+++.+..++...| .++||.+.+|..|..      +.++++|+++..  +++++++++++|+++
T Consensus       332 ~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~  401 (406)
T 1kmj_A          332 LGVIAFNLGKHHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI  401 (406)
T ss_dssp             CSEEEEEETTCCHHHHHHHH-HHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CCEEEEEECCCCHHHHHHHH-hhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHH
Confidence            44555567755566666555 555999999986542      225899999753  899999999999875

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.95  E-value=2.5e-26  Score=197.19  Aligned_cols=254  Identities=14%  Similarity=0.176  Sum_probs=175.4

Q ss_pred             cccccccCcc--c-chHHhcccc-eeEEeecCCCCCcccC-CCCC---CCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAG--D-LEDEVGKYC-NIEYLECGPGNNFFPD-LKGT---SRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~--~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+  . +...++..| +++.+|.+++..+.+| +++.   .+++++++++|+||||.+++   +++|.++|+
T Consensus        78 d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~  154 (384)
T 3zrp_A           78 DKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIR  154 (384)
T ss_dssp             CEEEEECSSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHG
T ss_pred             CEEEEecCCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHH
Confidence            5566654433  1 445557778 9999999865333333 2221   37899999999999999998   889999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccC-Cc----c---hHHHH
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS-GF----P---VINDF  147 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~-~~----~---~~~~~  147 (272)
                      ++|+++|+|++|.....   +..+...    +..++++|+||.++ ++.++||++++++.+... ..    .   -...+
T Consensus       155 ~~~~~li~D~a~~~~~~---~~~~~~~----~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (384)
T 3zrp_A          155 KYVELIVVDGVSSVGAE---EVKAEEW----NVDVYLTASQKALG-SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNW  226 (384)
T ss_dssp             GGEEEEEEECTTTTTTS---CCCTTTT----TCSEEEEETTSTTC-CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHH
T ss_pred             hcCCEEEEECcccccCc---ccccccc----CCCEEEecCccccc-CCCceEEEEECHHHHHHhcCCCCCCcccccHHHH
Confidence            99999999999874321   1122221    23489999999885 334489999988873211 00    0   00111


Q ss_pred             Hhhh------hhcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC----CceEEEeec
Q 036024          148 NRII------CTCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI----NAPYVWAHF  216 (272)
Q Consensus       148 ~~~~------~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~i~l  216 (272)
                      ....      .... .+.+...+.++.+.+.......+++++++++++++++.+.|+++|+++..+.    .+.++|+.+
T Consensus       227 ~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~  306 (384)
T 3zrp_A          227 LPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVIL  306 (384)
T ss_dssp             HHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEEC
T ss_pred             HHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEEC
Confidence            1100      1111 2456666665556665323334688999999999999999999898887765    477888999


Q ss_pred             CCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          217 PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       217 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      ++.+..++...|.++ ||.+.+|..+..   +++|+++.  .+++++++++++|++++
T Consensus       307 ~~~~~~~~~~~l~~~-gi~v~~g~~~~~---~~iRi~~~~~~~~e~i~~~~~~l~~~l  360 (384)
T 3zrp_A          307 KVADPQKVLAGTVNE-GVEFAPGVHPAF---KYFRIGHMGWVTPNDAIIAISVIERTL  360 (384)
T ss_dssp             SSSCHHHHHHHHHTT-TCCCEECCCTTC---CEEEEECCSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHC-CEEEecCCCCCc---CEEEEeccccCCHHHHHHHHHHHHHHH
Confidence            876667777777766 999999875432   89999964  58999999999998763

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.94  E-value=7.9e-26  Score=192.80  Aligned_cols=252  Identities=15%  Similarity=0.148  Sum_probs=175.2

Q ss_pred             ccccccc-Ccc-c-chHHhcccc-eeEEeecCCCCCcccCCCC-------CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVG-QAG-D-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-------TSRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~-~~~-~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++.. +++ . +...+...| +++.++++.+  +..|++.       .++++++++++|+||||.+++   +++|.+
T Consensus        81 d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~  155 (366)
T 1m32_A           81 DKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEV--ARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP---IDEVGA  155 (366)
T ss_dssp             CCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTT--SCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHH
T ss_pred             CeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC---HHHHHH
Confidence            5555553 333 2 556667778 9999998754  3344332       136889999999999999998   889999


Q ss_pred             HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcch-------HH
Q 036024           73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPV-------IN  145 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~-------~~  145 (272)
                      +|+++|+++|+|++|+....   +..+...    +..++++|+||.++ .+.++||++++++.........       ..
T Consensus       156 l~~~~~~~li~Dea~~~~~~---~~~~~~~----~~di~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~  227 (366)
T 1m32_A          156 LAHRYGKTYIVDAMSSFGGI---PMDIAAL----HIDYLISSANKCIQ-GVPGFAFVIAREQKLAACKGHSRSLSLDLYA  227 (366)
T ss_dssp             HHHHHTCEEEEECTTTTTTS---CCCTTTT----TCSEEEEESSSTTC-CCSSEEEEEEEHHHHTTCTTCCSCSTTCHHH
T ss_pred             HHHHcCCEEEEECCccccCc---Ccccccc----CccEEEecCccccc-CCCceEEEEECHHHHHhhcCCCCCccccHHH
Confidence            99999999999999985322   1222211    23489999999874 2234799999987743221100       00


Q ss_pred             HHHhhhh---hccCCcchHHHHHHHHhcccccHHH-HHHHHHHHHHHHHHHHHHHHhCCCeEecC---CCceEEEeecC-
Q 036024          146 DFNRIIC---TCFNGASNIAQAGGLACLSSEGLEA-VHSVVDYYKENTKILIDTLASLGIKVYGG---INAPYVWAHFP-  217 (272)
Q Consensus       146 ~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~~~~~~i~l~-  217 (272)
                      .+.....   ....+.+...+.++.++++...... +++.+++++++++++.+.|+++|+++..+   ..+.++|+.++ 
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~  307 (366)
T 1m32_A          228 QWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPE  307 (366)
T ss_dssp             HHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCC
T ss_pred             HHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccCchhcCceEEEEEcCc
Confidence            1111101   1123567777776777766322221 67889999999999999999888877654   35678999987 


Q ss_pred             --CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          218 --GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       218 --~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                        +.+..++...|.++ ||.+.+|..|   +.+++|+++.  .+++++++++++|++++
T Consensus       308 ~~~~~~~~~~~~l~~~-gi~v~~~~~~---~~~~iRi~~~~~~~~~~i~~~~~~l~~~~  362 (366)
T 1m32_A          308 DPQYRFSEFYRRLKEQ-GFVIYPGKVS---QSDCFRIGNIGEVYAADITALLTAIRTAM  362 (366)
T ss_dssp             CTTCCHHHHHHHHHHT-TEECEECCCS---SSCEEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred             cCCCCHHHHHHHHHHC-CEEEECCcCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence              44566777777666 9999999877   3679999975  48999999999998864

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.94  E-value=1.2e-25  Score=191.49  Aligned_cols=231  Identities=14%  Similarity=0.124  Sum_probs=170.6

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccC-CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc-CCEEEEcccCCcccc
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPD-LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN-GSIIIFDSAYAAYVT   92 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~vi~D~~~~~~~~   92 (272)
                      ...++..| +++.++.+.+..+.++ ++..++++++++++|+||||.+++   +++|.++|+++ |+++|+|++|..+..
T Consensus        99 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~p~~~li~D~a~~~~~~  175 (362)
T 3ffr_A           99 YEFAGELGREAYKEEAAFGKGFYPADITVPADAEIICLTHNETSSGVSMP---VEDINTFRDKNKDALIFVDAVSSLPYP  175 (362)
T ss_dssp             HHHHHHTTCEEEEEECCTTCCCCGGGCCCCTTCCEEEEESEETTTTEECC---HHHHTTSGGGSTTSEEEEECTTTTTSS
T ss_pred             HHHHHHhCCCeEEEecCCCCCCCHHHHhccCCccEEEEEcCCCCcceeCC---HHHHHHHHHhCCCCEEEEecccccCCc
Confidence            34566778 9999998755444443 443478999999999999999998   88899999999 999999999875322


Q ss_pred             CCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhh-------------------
Q 036024           93 DGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIIC-------------------  152 (272)
Q Consensus        93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  152 (272)
                      .   ..+..      ..++++|+||.++ .+|  +|+++++++.        ++.+.....                   
T Consensus       176 ~---~~~~~------~d~~~~s~~K~~~~~~G--~g~~~~~~~~--------~~~~~~~~~gg~~~~~~~~~~~~~~~~~  236 (362)
T 3ffr_A          176 K---FDWTK------IDSVFFSVQKCFGLPAG--LGVWILNDRV--------IEKSKALLAKRKSIGTYHTIPSMLEKAR  236 (362)
T ss_dssp             C---CCTTS------CSEEEEETTSTTCCCSC--CEEEEEEHHH--------HHHHHHHHHTTCCCCSTTSHHHHHHHHT
T ss_pred             c---cChhH------CcEEEEecccccCCCCc--eEEEEECHHH--------HHHhhhccccCCCCcccccHHHHHHHhh
Confidence            1   11111      2388999999998 677  5778888876        333332221                   


Q ss_pred             --hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC----CCceEEEeecCCCChHHHH
Q 036024          153 --TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGG----INAPYVWAHFPGRKSWDVF  225 (272)
Q Consensus       153 --~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~i~l~~~~~~~~~  225 (272)
                        ....+++...+.++..++.......+++.+++++++++++.+.|+++ |+++..+    ..+.++|+.+++ +..++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  315 (362)
T 3ffr_A          237 VNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM-LPGEIN  315 (362)
T ss_dssp             TTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS-CHHHHH
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC-CHHHHH
Confidence              11445666777666666653222336889999999999999999998 8888762    246778888887 677777


Q ss_pred             HHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          226 AEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      ..|.++ ||.+.+|..+  .+.+++|+++.  .+++++++++++|++++
T Consensus       316 ~~l~~~-gi~~~~g~~~--~~~~~iRis~~~~~~~e~i~~l~~~l~~~~  361 (362)
T 3ffr_A          316 KILEPF-DMAVGAGYGS--KKETQIRIANFPAHSLEQVHKLVQTLKEKI  361 (362)
T ss_dssp             HHHGGG-TEEEEECSGG--GTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred             HHHHHC-CeEEecCccc--cCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence            777777 9999998543  34689999964  58999999999998864

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.94  E-value=9.8e-26  Score=194.28  Aligned_cols=246  Identities=13%  Similarity=0.097  Sum_probs=172.4

Q ss_pred             cccccccCccc-c--hHHhcccc-eeEEeecCCCCCcccC-CCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-L--EDEVGKYC-NIEYLECGPGNNFFPD-LKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~--~~~~~~~g-~~~~~~~~~~~~~~~d-l~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.+. +  ...++..| +++.+|.++++.+.+| +++    .++++++++++|+||||.+++   +++|.++|
T Consensus        84 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~  160 (392)
T 2z9v_A           84 DVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP---IDAIGALV  160 (392)
T ss_dssp             CCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC---HHHHHHHH
T ss_pred             CEEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc---HHHHHHHH
Confidence            55666665332 2  34445578 9999999765333333 222    257899999999999999998   78999999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcchHHHHHhh---
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFPVINDFNRI---  150 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~---  150 (272)
                      +++|+++|+|++|+..   ..+..+..+    +..++++|+||.+ |.+|  +||++++++.        ++.+...   
T Consensus       161 ~~~~~~li~D~a~~~g---~~~~~~~~~----~~d~~~~s~sK~~~~~~g--~G~l~~~~~~--------~~~l~~~~~g  223 (392)
T 2z9v_A          161 SAHGAYLIVDAVSSFG---GMKTHPEDC----KADIYVTGPNKCLGAPPG--LTMMGVSERA--------WAKMKANPLA  223 (392)
T ss_dssp             HHTTCEEEEECTTTBT---TBSCCGGGG----TCSEEEECSSSTTCCCSC--CEEEEECHHH--------HHHHHTCTTS
T ss_pred             HHcCCeEEEEcccccC---Ccccccccc----cceEEEecCcccccCCCc--eeEEEECHHH--------HHHhhhccCC
Confidence            9999999999999742   112222222    2348899999965 4455  5999998877        3333211   


Q ss_pred             -----------------hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC----Cc
Q 036024          151 -----------------ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI----NA  209 (272)
Q Consensus       151 -----------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~  209 (272)
                                       ......+.+...+.++.++++......+++.+++++++++++.+.|+++|+++..+.    .+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~  303 (392)
T 2z9v_A          224 PRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASP  303 (392)
T ss_dssp             CCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCT
T ss_pred             CCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCC
Confidence                             112233455555555555555222122678899999999999999998888877632    46


Q ss_pred             eEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc---cCCHHHHHHHHHHHHHh
Q 036024          210 PYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG---FGHRESILEASRRLEAL  271 (272)
Q Consensus       210 ~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~---~~~~~~i~~~l~~l~~~  271 (272)
                      .++++.++ +.+..++...|.+++||.+.+|..+.  ..+++|+++   ..+++++++++++|+++
T Consensus       304 ~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~--~~~~lRi~~~~~~~~~~~i~~~~~~l~~~  367 (392)
T 2z9v_A          304 TTTAVRTPDGVDEKALRQAARARYGVVFSSGRGET--LGKLTRIGHMGPTAQPIYAIAALTALGGA  367 (392)
T ss_dssp             TEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred             ceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCCC--CCCeEEEeCcccccCHHHHHHHHHHHHHH
Confidence            78889986 55667777777776799999987543  368999995   46999999999999875

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.94  E-value=2.8e-26  Score=198.81  Aligned_cols=245  Identities=14%  Similarity=0.125  Sum_probs=177.8

Q ss_pred             cccccccCcc-c--chHHhcccc-eeEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAG-D--LEDEVGKYC-NIEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~-~--~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..+.+ .  +...++..| +++.+|.+.+  +.+|++.+      ++++++++++|+||||.+.+   +++|+++
T Consensus        89 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l  163 (411)
T 3nnk_A           89 DKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWG--EVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEI  163 (411)
T ss_dssp             CEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHH
T ss_pred             CEEEEecCCchHHHHHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHH
Confidence            5666666533 3  666777888 9999998654  34443331      38999999999999999988   8899999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh--
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII--  151 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~--  151 (272)
                      |+++|+++|+|+++.....   +......    +..+++.|++|.++ ++.++|+++++++.        .+.+....  
T Consensus       164 ~~~~~~~li~Dea~~~~~~---~~~~~~~----~~d~~~~s~~K~l~-~~~g~g~~~~~~~~--------~~~~~~~~~~  227 (411)
T 3nnk_A          164 CRRYDALFYTDATASLGGN---PLETDVW----GLDAVSAGMQKCLG-GPSGTSPITLSARM--------EEAIRRRKCV  227 (411)
T ss_dssp             HHHHTCEEEEECTTTBTTB---CCCTTTT----TCSEEECCSTTTTC-CCSSEEEEEECHHH--------HHHHHTTCCC
T ss_pred             HHHcCCEEEEECCcccCCc---ccchhcc----CCcEEEecCccccC-CCCceEEEEECHHH--------HHHHhhcccc
Confidence            9999999999999874211   1122111    23489999999854 33458999998877        33333221  


Q ss_pred             ----------------------------------hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024          152 ----------------------------------CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA  197 (272)
Q Consensus       152 ----------------------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~  197 (272)
                                                        .....+.+...+.++.+.+.......+++.+++++++++++.+.|+
T Consensus       228 ~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~  307 (411)
T 3nnk_A          228 EEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQ  307 (411)
T ss_dssp             CGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence                                              1122345667776666666533333378899999999999999999


Q ss_pred             hCCCeEecCCC---ceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-c--CCHHHHHHHHHHHHH
Q 036024          198 SLGIKVYGGIN---APYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG-F--GHRESILEASRRLEA  270 (272)
Q Consensus       198 ~~g~~~~~~~~---~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~--~~~~~i~~~l~~l~~  270 (272)
                      ++|+++..+.+   +.++++.++ +.+..++...|++++||.+.+|.  +....+++|+++ .  .+++++++++++|++
T Consensus       308 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~--~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~  385 (411)
T 3nnk_A          308 AMGLETFGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSF--GPLHGKVWRIGTMGYNARKDCVMTTLSALEA  385 (411)
T ss_dssp             HTTCCBCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECC--GGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             HcCCEeCCCcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCcc--CCCCCCEEEEeCccCcCCHHHHHHHHHHHHH
Confidence            99988876543   678889987 55677788888887899999874  333467999997 3  379999999999987


Q ss_pred             h
Q 036024          271 L  271 (272)
Q Consensus       271 ~  271 (272)
                      +
T Consensus       386 ~  386 (411)
T 3nnk_A          386 V  386 (411)
T ss_dssp             H
T ss_pred             H
Confidence            6

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.94  E-value=5.5e-26  Score=195.74  Aligned_cols=251  Identities=16%  Similarity=0.016  Sum_probs=177.2

Q ss_pred             ccccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            3 IDSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         3 ~d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      -|.|++..+.+. +...++..| +++.+|.+++  +.+|++.+     + +++++++++|+||||.+.+   +++|.++|
T Consensus       123 gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~  197 (397)
T 3f9t_A          123 HPKIIVPITAHFSFEKGREMMDLEYIYAPIKED--YTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IEELSKIA  197 (397)
T ss_dssp             SCEEEEETTCCTHHHHHHHHHTCEEEEECBCTT--SSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HHHHHHHH
T ss_pred             CeEEEECCcchhHHHHHHHHcCceeEEEeeCCC--CcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HHHHHHHH
Confidence            367777776666 778888889 9999999765  44443331     4 7899999999999999987   88899999


Q ss_pred             HHcCCEEEEcccCCccccCCCCC--C------ccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHH
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPR--S------IYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND  146 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~--~------~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~  146 (272)
                      +++|+++|+||+|..+..+....  .      ..... . +..+++.|++|.++ +|.|+|+++++++.+.+.+......
T Consensus       198 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~  274 (397)
T 3f9t_A          198 KENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFS-L-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPY  274 (397)
T ss_dssp             HHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGG-G-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTT
T ss_pred             HHhCCeEEEEccccchhhhhccccccccccccccccc-c-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCcc
Confidence            99999999999998755432111  0      11111 1 33488999999885 7789999999877642221111000


Q ss_pred             HHhhhh----hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChH
Q 036024          147 FNRIIC----TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSW  222 (272)
Q Consensus       147 ~~~~~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~  222 (272)
                      +.....    .+..+.+..++.++.+.+.   ..+.++..++++++++++.+.|+++|+.+..+..+.++++.++.  ..
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~--~~  349 (397)
T 3f9t_A          275 LTETRQATILGTRVGFGGACTYAVLRYLG---REGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDED--YK  349 (397)
T ss_dssp             SSSSEECSSCSSCCSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECTT--HH
T ss_pred             ccCCCccccccccccchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeCC--HH
Confidence            000000    1111234455555555543   34557888899999999999999998887666678888888874  55


Q ss_pred             HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      ++...|.++ ||.+.++..     ++++|+++.  .+++++++++++|++++
T Consensus       350 ~~~~~l~~~-gi~v~~~~~-----~~~~Ri~~~~~~~~e~i~~~~~~l~~~l  395 (397)
T 3f9t_A          350 EVCKKLRDR-GIYVSVCNC-----VKALRIVVMPHIKREHIDNFIEILNSIK  395 (397)
T ss_dssp             HHHHHHHHT-TCBCEECSS-----SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhC-CeEEeccCC-----CCEEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence            666666666 999998763     479999975  58999999999999875

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.94  E-value=9.4e-26  Score=195.82  Aligned_cols=247  Identities=17%  Similarity=0.185  Sum_probs=176.5

Q ss_pred             cccccccCc-cc--chHHhcccc-eeEEeecCCCCCcccC-CCC-C--CCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQA-GD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-T--SRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~-~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~--~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+. +.  +...++..| +++.+|.+.++.+.++ +++ .  ++++++++++|+||||.+++   +++|.++|+
T Consensus        87 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~  163 (416)
T 3isl_A           87 DDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACR  163 (416)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHH
T ss_pred             CEEEEecCCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHH
Confidence            556666554 33  556677788 9999999866433333 222 1  47899999999999999998   889999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh-----
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI-----  150 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~-----  150 (272)
                      ++|+++|+|++|+....   +..+...    +..+++.|++|.++ ++.++|+++++++..        +.+...     
T Consensus       164 ~~~~~li~D~a~~~~~~---~~~~~~~----~~d~~~~s~~K~l~-g~~g~g~~~~~~~~~--------~~~~~~~~~~~  227 (416)
T 3isl_A          164 TEDALFIVDAVATIGGC---EVKVDEW----KIDAAIGGTQKCLS-VPSGMAPITYNERVA--------DVIAARKKVER  227 (416)
T ss_dssp             HTTCEEEEECTTTTTTS---CCCTTTT----TCSEEECCSSSTTC-CCSSEEEEEECHHHH--------HHHHTC-----
T ss_pred             HcCCEEEEECCccccCC---Ccchhhc----CCCEEEecCccccC-CCCCeEEEEECHHHH--------HHhhccccccc
Confidence            99999999999874221   1122221    23489999999753 334589999988773        333211     


Q ss_pred             ---------------------------------hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024          151 ---------------------------------ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA  197 (272)
Q Consensus       151 ---------------------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~  197 (272)
                                                       ......+.+...+.++.+.+.......+++.+++++++++++.+.|+
T Consensus       228 Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~  307 (416)
T 3isl_A          228 GIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIK  307 (416)
T ss_dssp             -------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence                                             11123345667776666666532222378999999999999999999


Q ss_pred             hCCCeEecCCC---ceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHH-HHHHHHHHHH
Q 036024          198 SLGIKVYGGIN---APYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRES-ILEASRRLEA  270 (272)
Q Consensus       198 ~~g~~~~~~~~---~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~-i~~~l~~l~~  270 (272)
                      +.|+++..+.+   +.++++.++ +.+..++...|.+++||.+.+|..  +...+++|+++.  .++++ +++++++|++
T Consensus       308 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~--~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~  385 (416)
T 3isl_A          308 AMGLRLFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSFG--PLAGKIWRIGTMGYSCRKENVLFVLAGLEA  385 (416)
T ss_dssp             HTTCCBCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCS--TTTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             HcCCEeccCccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCC--CCCCCEEEEecccCCCcHHHHHHHHHHHHH
Confidence            99988877643   578888986 556778888887777999998873  344689999972  35555 9999999987


Q ss_pred             h
Q 036024          271 L  271 (272)
Q Consensus       271 ~  271 (272)
                      +
T Consensus       386 ~  386 (416)
T 3isl_A          386 V  386 (416)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.94  E-value=1e-25  Score=195.76  Aligned_cols=245  Identities=18%  Similarity=0.217  Sum_probs=171.7

Q ss_pred             cccccccCccc-----chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-----LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..+.+.     |...++..| +++.+|.+.  ++.+|++.     .+++++|++++|+||||.+++   +++|.+
T Consensus       119 d~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~  193 (420)
T 1t3i_A          119 DEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE--QESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNP---AEEIAQ  193 (420)
T ss_dssp             CEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT--TSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC---HHHHHH
T ss_pred             CEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCC--CCCcCHHHHHHhhCCCceEEEEeCCcccccCcCC---HHHHHH
Confidence            55666665444     344556678 999999874  34455333     257899999999999999999   899999


Q ss_pred             HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024           73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  152 (272)
                      +|+++|+++|+|++|..+..   +..+..+    +..+++.|+||.+|.+|  +||+++++++        .+.+.....
T Consensus       194 l~~~~~~~li~D~a~~~~~~---~~~~~~~----~~di~~~s~sK~~~~~g--~G~~~~~~~~--------~~~~~~~~~  256 (420)
T 1t3i_A          194 LAHQAGAKVLVDACQSAPHY---PLDVQLI----DCDWLVASGHKMCAPTG--IGFLYGKEEI--------LEAMPPFFG  256 (420)
T ss_dssp             HHHHTTCEEEEECTTTTTTS---CCCHHHH----TCSEEEEEGGGTTSCTT--CEEEEECHHH--------HHHSCCCSC
T ss_pred             HHHHcCCEEEEEhhhccCCc---cCchhhc----CCCEEEEehhhhcCCCc--eEEEEEchHH--------HhhcCceec
Confidence            99999999999999985332   1123333    23489999999888767  8999998877        333322211


Q ss_pred             --------------------hccCCcchHHHHHHHH-hcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC---
Q 036024          153 --------------------TCFNGASNIAQAGGLA-CLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI---  207 (272)
Q Consensus       153 --------------------~~~~~~~~~~~~a~~~-~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~---  207 (272)
                                          ....+++.+.+.++.. .++.....++++++++++++++++.+.|+++ |+++..+.   
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~  336 (420)
T 1t3i_A          257 GGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKH  336 (420)
T ss_dssp             STTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGG
T ss_pred             CCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccc
Confidence                                0112345555554443 3432222346788899999999999999998 88887764   


Q ss_pred             --CceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCC-----C-CCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          208 --NAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPG-----G-EEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       208 --~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-----~-~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                        .+.++++.+++.+..++.. .++++||.+.+|..|...     + .+++|+++.  .+++++++++++|+++
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~-~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~  409 (420)
T 1t3i_A          337 GDRAALASFNVAGLHASDVAT-MVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQAT  409 (420)
T ss_dssp             SCBCSEEEEEETTBCHHHHHH-HHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             cccCCEEEEEECCCCHHHHHH-HHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Confidence              2566666787545556554 455669999999765321     2 678999985  4899999999998875

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.94  E-value=6.3e-26  Score=195.54  Aligned_cols=244  Identities=14%  Similarity=0.151  Sum_probs=173.8

Q ss_pred             cccccccCcc-cc--hHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAG-DL--EDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~-~~--~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..+.+ .+  ...++..| +++.+|++++  +.+|++.+     + ++++|++++|+||||.+++   +++|.++
T Consensus        95 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~~  169 (393)
T 2huf_A           95 DVILIGHTGHWGDRSADMATRYGADVRVVKSKVG--QSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQG---LEGVGAL  169 (393)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHH
T ss_pred             CEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCC--CCCCHHHHHHHHhccCCcEEEEEccCCCccccCC---HHHHHHH
Confidence            5566666533 32  23445578 9999998754  34453331     4 7899999999999999998   8899999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcchHHHHHhhh-
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFPVINDFNRII-  151 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~-  151 (272)
                      |+++|+++|+|++|...   ..+..+..    .+..+++.|+||.+ |.+|+  ||++++++.        .+.+.... 
T Consensus       170 ~~~~~~~li~D~a~~~~---~~~~~~~~----~~~d~~~~s~sK~l~g~~G~--G~~~~~~~~--------~~~~~~~~~  232 (393)
T 2huf_A          170 CHQHNCLLIVDTVASLG---GAPMFMDR----WEIDAMYTGSQKVLGAPPGI--TPVSFSHRA--------VERYKRRNT  232 (393)
T ss_dssp             HHHTTCEEEEECTTTBT---TBCCCTTT----TTCSEEECCSSSTTCCCSSC--EEEEECHHH--------HHHHHTCSS
T ss_pred             HHHcCCEEEEEcccccC---CCCcchhh----cCccEEEECCCcccccCCCe--EEEEECHHH--------HHHHhhcCC
Confidence            99999999999998642   11122211    23458999999974 56775  999998776        33333220 


Q ss_pred             ----------------------hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC--
Q 036024          152 ----------------------CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI--  207 (272)
Q Consensus       152 ----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--  207 (272)
                                            .....+++...+.++.++++......+++.+++++++++++.+.|+++|+++..+.  
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~  312 (393)
T 2huf_A          233 KVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFELYADPKD  312 (393)
T ss_dssp             CCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGG
T ss_pred             CCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccc
Confidence                                  11123456666666665665322234688889999999999999998888877653  


Q ss_pred             -CceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-c--CCHHHHHHHHHHHHHh
Q 036024          208 -NAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG-F--GHRESILEASRRLEAL  271 (272)
Q Consensus       208 -~~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~--~~~~~i~~~l~~l~~~  271 (272)
                       .+.++++.++ +.+..++...|++++||.+.+|..|.  ..+++|+++ .  .+++++++++++|+++
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~--~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~  379 (393)
T 2huf_A          313 RLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPT--AGQVFRIGLMGQNATTERVDRVLQVFQEA  379 (393)
T ss_dssp             BCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred             cCCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCcccc--cCCEEEEEcccCcCCHHHHHHHHHHHHHH
Confidence             3458888887 55667777788777799999988653  367999998 4  3688899999999875

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.94  E-value=6.1e-26  Score=195.38  Aligned_cols=236  Identities=14%  Similarity=0.161  Sum_probs=171.1

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccC-CCC--CC-CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPD-LKG--TS-RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY   90 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~   90 (272)
                      ...+...| +++.++++++..+.+| +++  .+ +++++++++||||||.+++   +++|.++|+++|+++|+|++|...
T Consensus       114 ~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~g  190 (393)
T 3kgw_A          114 AEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHRYQCLLLVDSVASLG  190 (393)
T ss_dssp             HHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTTT
T ss_pred             HHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHHcCCEEEEECCcccc
Confidence            55667788 9999999766433333 222  13 8999999999999999998   889999999999999999998732


Q ss_pred             ccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh------------------
Q 036024           91 VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC------------------  152 (272)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------------------  152 (272)
                         .....+..    .+..+++.|+||.++ ++..+||++++++.        ++.+.....                  
T Consensus       191 ---~~~~~~~~----~~~d~~~~s~sK~~~-~~~g~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (393)
T 3kgw_A          191 ---GVPIYMDQ----QGIDIMYSSSQKVLN-APPGISLISFNDKA--------KYKVYSRKTKPVSFYTDITYLAKLWGC  254 (393)
T ss_dssp             ---TSCCCTTT----TTCCEEEEESSSTTC-CCSSCEEEEECHHH--------HHHHHTCSSCCSCSTTCHHHHHHHTTC
T ss_pred             ---Ccccchhh----cCCCEEEecCccccc-CCCceeEEEECHHH--------HHHHhccCCCCCceeecHHHHHHhhhh
Confidence               11111111    123488889999774 33348999998887        344432111                  


Q ss_pred             -----hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC----CceEEEeecC-CCChH
Q 036024          153 -----TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI----NAPYVWAHFP-GRKSW  222 (272)
Q Consensus       153 -----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~i~l~-~~~~~  222 (272)
                           ....+.+...+.++.+.+......++++.+++++++++++.+.|+++|+++..+.    .+.++++.++ +.+..
T Consensus       255 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (393)
T 3kgw_A          255 EGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGYNWR  334 (393)
T ss_dssp             SSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTBCHH
T ss_pred             ccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCCCHH
Confidence                 1123456676766666665333345788999999999999999999988876432    2567788886 45667


Q ss_pred             HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-c--CCHHHHHHHHHHHHHhC
Q 036024          223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISG-F--GHRESILEASRRLEALF  272 (272)
Q Consensus       223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~--~~~~~i~~~l~~l~~~l  272 (272)
                      ++...|++++||.+.+|..+.  ..+++|+++ .  .+++++++++++|++++
T Consensus       335 ~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l  385 (393)
T 3kgw_A          335 DIVSYVLDHFSIEISGGLGPT--EERVLRIGLLGYNATTENVDRVAEALREAL  385 (393)
T ss_dssp             HHHHHHHHHHCEECBCCCGGG--TTTEEEEECCGGGCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCEEEeCCcccC--CCCEEEEEecccCCCHHHHHHHHHHHHHHH
Confidence            788888887799999987543  367999997 4  38999999999998763

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.94  E-value=3.6e-26  Score=197.27  Aligned_cols=245  Identities=13%  Similarity=0.120  Sum_probs=176.4

Q ss_pred             cccccccCccc-ch--HHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LE--DEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~--~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..+.+. +.  ..++..| +++.++.++  ++.+|++.+     + ++++|++++|+||||.+++   +++|+++
T Consensus        94 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l  168 (396)
T 2ch1_A           94 DRVLIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQI  168 (396)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHH
T ss_pred             CeEEEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHH
Confidence            56777766555 43  3567778 999999875  344554432     3 7899999999999999999   8899999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh---
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI---  150 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~---  150 (272)
                      |+++|+++|+||+|..   +..+..+..+    +..+++.|++|.++ ++.++|+++++++.+        +.+...   
T Consensus       169 ~~~~~~~li~Dea~~~---g~~~~~~~~~----~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~--------~~~~~~~~~  232 (396)
T 2ch1_A          169 CHQHDCLLIVDAVASL---CGVPFYMDKW----EIDAVYTGAQKVLG-APPGITPISISPKAL--------DVIRNRRTK  232 (396)
T ss_dssp             HHHTTCEEEEECTTTB---TTBCCCTTTT----TCCEEECCCC-CCC-CCSSCEEEEECHHHH--------HHHHTCSSC
T ss_pred             HHHcCCEEEEEccccc---cCCccchhhc----CcCEEEEcCCcccc-CCCCeEEEEECHHHH--------HhhhhccCc
Confidence            9999999999999983   2212222222    12267789999775 334579999988662        222110   


Q ss_pred             --------------h------hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC--
Q 036024          151 --------------I------CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN--  208 (272)
Q Consensus       151 --------------~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~--  208 (272)
                                    .      .....+.+..++.++.+++......++++.+++++++++++.+.|+++|+++..+.+  
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~  312 (396)
T 2ch1_A          233 SKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRH  312 (396)
T ss_dssp             CSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGG
T ss_pred             ccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccc
Confidence                          0      112344677788877777764333567889999999999999999988988877643  


Q ss_pred             --ceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-c--CCHHHHHHHHHHHHHh
Q 036024          209 --APYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG-F--GHRESILEASRRLEAL  271 (272)
Q Consensus       209 --~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~--~~~~~i~~~l~~l~~~  271 (272)
                        +.++++.++ +.+..++...|++++||.+.+|..+.  ..+++|+++ .  .+++++++++++|+++
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~e~i~~~~~~l~~~  379 (396)
T 2ch1_A          313 RLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPT--FGKAWRVGIMGECSTVQKIQFYLYGFKES  379 (396)
T ss_dssp             BCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred             cCCceEEEEcCCCCCHHHHHHHHHHhCCEEEecCcccc--CCCEEEEECCCCcCCHHHHHHHHHHHHHH
Confidence              247888886 55677788888777799999887442  367999997 2  3789999999999875

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.94  E-value=7.7e-27  Score=201.77  Aligned_cols=204  Identities=16%  Similarity=0.165  Sum_probs=152.8

Q ss_pred             CCceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++++|+||||. +++.+++++|+++|+++|+++|+||+|.++.+.+.+.++..+...++  ++  |+||.++ +
T Consensus       182 ~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d--~~--s~sK~~~-~  256 (397)
T 2ord_A          182 EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPD--VL--TTAKGLG-G  256 (397)
T ss_dssp             TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCS--EE--EECGGGG-T
T ss_pred             cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCC--ee--eeccccC-C
Confidence            58899999999999999 99999999999999999999999999997665554333333332233  22  7899999 8


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--C
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--G  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g  200 (272)
                      |+|+||++++++..  .       +.........+.+.+.+.++.++++....   ++.+++++++++++.+.|+++  +
T Consensus       257 G~r~G~~~~~~~~~--~-------l~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~  324 (397)
T 2ord_A          257 GVPIGAVIVNERAN--V-------LEPGDHGTTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEE  324 (397)
T ss_dssp             TSCCEEEEECSTTC--C-------CCTTSSCCSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCeEEEEEchHhc--c-------cCCCCcCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999988763  1       11112233445788888888888764222   457788889999999988775  3


Q ss_pred             CeE---ecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          201 IKV---YGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       201 ~~~---~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                      +..   .. ..+.++|+.++. .+..++...|.+ +||.+.|+.      ++++|++  +..+++++++++++|++++
T Consensus       325 ~~~~~~~~-~~g~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~------~~~iRis~~~~~~~e~i~~~~~~l~~~l  394 (397)
T 2ord_A          325 YDVVADVR-GMGLMIGIQFREEVSNREVATKCFE-NKLLVVPAG------NNTIRFLPPLTVEYGEIDLAVETLKKVL  394 (397)
T ss_dssp             CTTEEEEE-EETTEEEEEECTTSCHHHHHHHHHH-TTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCceEEEE-EEeEEEEEEECChHHHHHHHHHHHH-CCCEEccCC------CCEEEEECCcCCCHHHHHHHHHHHHHHH
Confidence            332   22 356788888874 346667777766 599999873      5789999  4569999999999998763

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.94  E-value=2.9e-26  Score=195.33  Aligned_cols=233  Identities=16%  Similarity=0.046  Sum_probs=156.0

Q ss_pred             cccc-eeEEeecCCCCCcccC-CCCCCCceEEEEecCCCcc-ccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCC
Q 036024           20 GKYC-NIEYLECGPGNNFFPD-LKGTSRTDIIFFCSPNNPT-GHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP   96 (272)
Q Consensus        20 ~~~g-~~~~~~~~~~~~~~~d-l~~~~~~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~   96 (272)
                      ...| ++++++.+ +..+.++ +++.++++++++++||||| |.+++.+++++|+++|++||+++|+|++|.........
T Consensus       109 ~~~g~~~~~v~~~-~~~~d~~~l~~~~~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~  187 (357)
T 3lws_A          109 ELHPIETILVGAA-DRLMTLDEIKALPDIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE  187 (357)
T ss_dssp             HHSSCEEEECSCT-TSCCCHHHHHTCCSCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred             hccCcEEEEecCC-CCCcCHHHHhcCcCcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence            3346 77777742 2233333 4444569999999999998 99999999999999999999999999998621111111


Q ss_pred             CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc--CCcchHHHHHHHHhccccc
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF--NGASNIAQAGGLACLSSEG  174 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~  174 (272)
                      .+...+....+  +++.|+||.++.++.  ||+++++++        ++.+........  .......+.++...+..  
T Consensus       188 ~~~~~~~~~~d--~~~~s~sK~~~~~~g--g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--  253 (357)
T 3lws_A          188 KTAAEIAGLFD--SIYISFYKGLGGIAG--AILAGPAAF--------CQTARIWKRRYGGDLISLYPYIVSADYYYEL--  253 (357)
T ss_dssp             CCHHHHHTTSS--EEEEESSSTTCCSSC--EEEEECHHH--------HHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH--
T ss_pred             CChHHHHhcCC--EEEEeccccCCCCce--EEEEcCHHH--------HHHHHHHHHHhcCCcccchHHHHHHHHHHHH--
Confidence            22322222233  447899999943432  999988877        555554443222  11223333333344432  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEe-cCCCceEEEeecCCC--C-hHHHHHHHHHhcCeEeeCCCCCCCCCCCe
Q 036024          175 LEAVHSVVDYYKENTKILIDTLASL-GIKVY-GGINAPYVWAHFPGR--K-SWDVFAEILEKTHITTVPGSGFGPGGEEY  249 (272)
Q Consensus       175 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~i~l~~~--~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~  249 (272)
                        + .+..+++.++++++.+.|+++ |+++. .+.+++++|+.++..  . ..++... ++++||.+.||..|. .+..+
T Consensus       254 --~-~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~v~~g~~~~-~~~~~  328 (357)
T 3lws_A          254 --R-KDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQV-QEETGLGFVGYLVDK-DGYCS  328 (357)
T ss_dssp             --H-TTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHH-HHHHCEESCSCCEEC-SSEEE
T ss_pred             --H-HHHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHH-HHhcCeEEecccccC-CCceE
Confidence              2 223345678889999999998 89884 567889999999753  2 3444444 455699999997665 34568


Q ss_pred             EEEEcc-----CCHHHHHHHHHHHHHhC
Q 036024          250 IRISGF-----GHRESILEASRRLEALF  272 (272)
Q Consensus       250 ~R~s~~-----~~~~~i~~~l~~l~~~l  272 (272)
                      +|+++.     .+++++++++++|++++
T Consensus       329 ~r~~i~~~~~~~~~~~l~~al~~l~~al  356 (357)
T 3lws_A          329 TEISVGDAYGELDQQTRDAGFARLRQAF  356 (357)
T ss_dssp             EEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred             EEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence            999863     47899999999998875

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.94  E-value=9.7e-26  Score=191.32  Aligned_cols=252  Identities=14%  Similarity=0.111  Sum_probs=173.1

Q ss_pred             cccccccC-ccc--chHHhcccc-eeEEeecCCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQ-AGD--LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~-~~~--~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..+ ++.  +...++..| +++.+|.+++  +.+|++.+     + +++++++++|+||||.+++   +++|.++
T Consensus        75 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l  149 (353)
T 2yrr_A           75 GPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPG--EPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGAL  149 (353)
T ss_dssp             CCEEEEECSHHHHHHHHHHHHTTCCEEEEECCTT--SCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHH
T ss_pred             CcEEEEcCCCchHHHHHHHHHcCCceEEEeCCCC--CCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHH
Confidence            55666553 232  234456678 9999999754  34443331     3 7899999999999999998   7899999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCC--cch---HHHH
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSG--FPV---INDF  147 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~--~~~---~~~~  147 (272)
                      |+++|+++|+|++|...   ..+.++..+.    ..+++.|++|.+ |.+|  +||++++++.+....  ...   ...+
T Consensus       150 ~~~~~~~li~D~a~~~~---~~~~~~~~~~----~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~  220 (353)
T 2yrr_A          150 AKEAGALFFLDAVTTLG---MLPFSMRAMG----VDYAFTGSQKCLSAPPG--LAPIAASLEARKAFTGKRGWYLDLARV  220 (353)
T ss_dssp             HHHHTCEEEEECTTTTT---TSCCCHHHHT----CSEEECCTTSTTCCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHH
T ss_pred             HHHcCCeEEEEcCcccc---cccccccccC----ceEEEecCcccccCCCc--eEEEEECHHHHHHhccCCCccccHHHH
Confidence            99999999999999632   1122333331    238889999965 4456  799999988742211  000   0000


Q ss_pred             Hh-h-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC--CceEEEeecC-CCChH
Q 036024          148 NR-I-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI--NAPYVWAHFP-GRKSW  222 (272)
Q Consensus       148 ~~-~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~~i~l~-~~~~~  222 (272)
                      .. . ......+.+...+.++.+++.......+++.+++++++++++.+.|+++|+++..+.  .+.++|+.++ +.+..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  300 (353)
T 2yrr_A          221 AEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEGVDAD  300 (353)
T ss_dssp             HHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCTTCCHH
T ss_pred             hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECCCCCCHH
Confidence            01 0 122233466677666666665322233678899999999999999998898887654  5667788886 55666


Q ss_pred             HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHH-HHHHHHHHhC
Q 036024          223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESIL-EASRRLEALF  272 (272)
Q Consensus       223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~-~~l~~l~~~l  272 (272)
                      ++...|.++ ||.+.+|..|..  ++++|+++  ..++++++ +++++|++++
T Consensus       301 ~~~~~l~~~-gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~~~l~~~l  350 (353)
T 2yrr_A          301 RLVRALYAE-GVAVAGGIGPTR--GQVLRLGLMGEGARREAYQAFLKALDRAL  350 (353)
T ss_dssp             HHHHHHHHT-TEECEECCGGGT--TTCEEEECSGGGSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHC-CEEEeCCccccC--CCeEEEecCccCCHHHHHHHHHHHHHHHH
Confidence            777777666 999999986643  57899997  35888888 9999998753

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.94  E-value=1.5e-25  Score=192.35  Aligned_cols=247  Identities=13%  Similarity=0.055  Sum_probs=171.2

Q ss_pred             cccccccCccc-chHHh---cccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEV---GKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~---~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..+.+. +....   +..| +++.+|++++  +.+|++.     .++++++++++|+||||.+++   +++|.++
T Consensus        89 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l  163 (382)
T 4eb5_A           89 KHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKY--GEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VEEISEV  163 (382)
T ss_dssp             CEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTT--SCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHH
T ss_pred             CEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCC--CccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HHHHHHH
Confidence            55666665443 44333   3468 9999999754  3444332     257899999999999999998   7899999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHHHhhhh
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDFNRIIC  152 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~~~~~~  152 (272)
                      |+++|++ |+|++|..   +..+..+..+    +..++++|+||.+|.+|  +||++++++. +...    .........
T Consensus       164 ~~~~~~~-i~D~a~~~---g~~~~~~~~~----~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~----~~~~~~~~~  229 (382)
T 4eb5_A          164 LAGKAAL-HIDATASV---GQIEVDVEKI----GADMLTISSNDIYGPKG--VGALWIRKEAKLQPV----ILGGGQENG  229 (382)
T ss_dssp             HTTSSEE-EEECTTTB---TTBCCCHHHH----TCSEEEEETGGGTCCSS--CEEEEEETTCCCCCS----SCSSCTGGG
T ss_pred             HHHCCCE-EEEcchhc---CCcccCcccc----CCCEEEeehHHhcCCCc--eEEEEEccccccCce----ecCCCcccc
Confidence            9999999 99999983   2112223222    23489999999988656  7999988764 2110    000000011


Q ss_pred             hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC---ceEEEeecCCCChHHHHHHH
Q 036024          153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN---APYVWAHFPGRKSWDVFAEI  228 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~~~~~i~l~~~~~~~~~~~l  228 (272)
                      ....+++...+.++.+++.. ..+++++++++++++++++.+.|+++ |+++..+.+   +.++++.+++.+..++...|
T Consensus       230 ~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  308 (382)
T 4eb5_A          230 LRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSL  308 (382)
T ss_dssp             TSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTSCHHHHHHHH
T ss_pred             ccCCCccHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCCcCHHHHHHHH
Confidence            22334555666655555542 22356888999999999999999987 888876542   55788888765666777776


Q ss_pred             HHhcCeEeeCCCCCCCC-----------------CCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          229 LEKTHITTVPGSGFGPG-----------------GEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~-----------------~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      .+ +||.+.+|..|.+.                 +.+++|+++.  .+++++++++++|+++
T Consensus       309 ~~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  369 (382)
T 4eb5_A          309 DM-AGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGV  369 (382)
T ss_dssp             HH-HTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             HH-CCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence            54 59999999876532                 2579999985  5899999999999875

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.94  E-value=3e-25  Score=190.94  Aligned_cols=250  Identities=14%  Similarity=0.079  Sum_probs=170.8

Q ss_pred             cccccccCccc-chHH----hcccc-eeEEeecCCCCCcccC---CCC--CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDE----VGKYC-NIEYLECGPGNNFFPD---LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~----~~~~g-~~~~~~~~~~~~~~~d---l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..+.+. +...    ++..| +++.+|.+.+.++.+|   +++  .++++++++++|+||||.+++   +++|.+
T Consensus       102 d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~  178 (390)
T 1elu_A          102 DEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLP---LAEIMA  178 (390)
T ss_dssp             CEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCC---HHHHHH
T ss_pred             CEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCceecC---HHHHHH
Confidence            56777666555 3322    35567 9999998742344444   322  267899999999999999999   889999


Q ss_pred             HHH----HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH
Q 036024           73 FAR----NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN  148 (272)
Q Consensus        73 ~~~----~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~  148 (272)
                      +|+    ++|+++|+|++|....   .+..+..    .+..++++|+||.++ +|.++||++++++.+........ .+.
T Consensus       179 l~~~~~~~~~~~li~Dea~~~g~---~~~~~~~----~~~d~~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~-g~~  249 (390)
T 1elu_A          179 VCRRHQGNYPVRVLVDGAQSAGS---LPLDFSR----LEVDYYAFTGHKWFA-GPAGVGGLYIHGDCLGEINPTYV-GWR  249 (390)
T ss_dssp             HHHHCCSSSCCEEEEECTTTBTT---BCCCTTT----SCCSEEEEESSSTTC-CCTTCEEEEECTTTGGGCCCCSC-CTT
T ss_pred             HHhhhhhhcCcEEEEEcccccCC---cCCChhh----cCCCEEEcccccccc-CCCceEEEEECHHhHhhcCCccc-cCC
Confidence            999    9999999999998421   1112211    234589999999443 55669999999877432111000 000


Q ss_pred             ---------------hhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC--CCc
Q 036024          149 ---------------RIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL-GIKVYGG--INA  209 (272)
Q Consensus       149 ---------------~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~  209 (272)
                                     ........+.+...+.++.+++..... .++++++++++++++++.+.|+++ |+++..+  ..+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~  329 (390)
T 1elu_A          250 SITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQA  329 (390)
T ss_dssp             TEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSS
T ss_pred             cccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccc
Confidence                           001122334566666666565552222 247889999999999999999998 8888753  245


Q ss_pred             eEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          210 PYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       210 ~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      .++++.++ +.+..++...|. ++||.+.+|.     +++++|+++  ..+++++++++++|+++
T Consensus       330 ~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~-----~~~~iRis~~~~~~~~~i~~~~~~l~~~  388 (390)
T 1elu_A          330 GLVSFTVDSPLGHRAIVQKLE-EQRIYLRTIA-----DPDCIRACCHYITDEEEINHLLARLADF  388 (390)
T ss_dssp             SEEEEEECSSSCHHHHHHHHH-HTTEECEEET-----TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred             cEEEEEcCCCCCHHHHHHHHH-HCCEEEEecC-----CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence            56666885 445667777775 5599999876     357999996  46999999999999865

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.94  E-value=3.9e-26  Score=196.98  Aligned_cols=204  Identities=13%  Similarity=0.121  Sum_probs=155.8

Q ss_pred             CCceEEEEecCCCccccCCCHHH-HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQ-LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++++|+||||.+++.++ +++|+++|++||+++|+||+|.++...+......... ...++   .|+||.++ +
T Consensus       181 ~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~d~---~~~SK~l~-g  255 (392)
T 3ruy_A          181 PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDN-VTPDM---YILGKALG-G  255 (392)
T ss_dssp             TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSE---EEECGGGG-T
T ss_pred             cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccC-CCCCE---EEEchhhh-C
Confidence            68999999999999999996555 9999999999999999999998776655433332222 22222   26789986 5


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-  200 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-  200 (272)
                      | +|+||++++++.        .+.+.........+.+.+++.++.++++... .  ++.+++++++++++++.|++++ 
T Consensus       256 G~~~~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~--~~~~~~~~~~~~~l~~~L~~~~~  324 (392)
T 3ruy_A          256 GVFPISCAAANRDI--------LGVFEPGSHGSTFGGNPLACAVSIAALEVLE-E--EKLTERSLQLGEKLVGQLKEIDN  324 (392)
T ss_dssp             TTSCCEEEEECHHH--------HTTCCTTSSCCSSTTCHHHHHHHHHHHHHHH-H--TTHHHHHHHHHHHHHHHHTTCCC
T ss_pred             ChhhhEEEEECHHH--------HhhhccCCcCCCCCCCHHHHHHHHHHHHHHH-h--hhHHHHHHHHHHHHHHHHHHhcC
Confidence            7 999999998877        4444444445556688899998888887422 2  6778899999999999999874 


Q ss_pred             --CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          201 --IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       201 --~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                        +....+ .+.++++.++. +..++...|.+ +||.+.|+.      .+++|++  +..+++++++++++|++++
T Consensus       325 ~~~~~~~~-~g~~~~~~~~~-~~~~l~~~l~~-~gi~v~~~~------~~~iRi~~~~~~~~~~i~~~~~~l~~~l  391 (392)
T 3ruy_A          325 PMITEVRG-KGLFIGIELNE-PARPYCEQLKA-AGLLCKETH------ENVIRIAPPLVISEEDLEWAFQKIKAVL  391 (392)
T ss_dssp             TTEEEEEE-ETTEEEEEESS-CSHHHHHHHHT-TTEECCCBT------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCceEEEe-eeeEEEEEEcc-hHHHHHHHHHH-CCcEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence              444444 46666677776 66677777764 599998865      6799999  5679999999999998864

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.94  E-value=2.5e-25  Score=192.77  Aligned_cols=237  Identities=15%  Similarity=0.142  Sum_probs=164.7

Q ss_pred             cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHH-
Q 036024            4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN-   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~-   76 (272)
                      |.|++..|.+. +..    .++..| +++.++.+.-..+.-.+  .++++++++++|+||||.+++   +++|+++|++ 
T Consensus       102 d~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i--~~~t~~v~l~~p~NptG~v~~---l~~i~~la~~~  176 (404)
T 1e5e_A          102 DHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHM--KPNTKIVYFETPANPTLKIID---MERVCKDAHSQ  176 (404)
T ss_dssp             CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTS
T ss_pred             CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhc--CCCCcEEEEECCCCCCCcccC---HHHHHHHHHhh
Confidence            56777776665 566    567788 99999886211111112  257999999999999999997   8999999999 


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHH-HHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVIN-DFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~-~~~~~~~~~  154 (272)
                      +|+++|+|++|..+.+.   .++ .+    ++.+++.|+||.++.+|+|+ ||++++++.        +. .+.......
T Consensus       177 ~~~~li~De~~~~~~~~---~~~-~~----~~di~~~S~sK~~~~~g~ri~G~~~~~~~~--------~~~~l~~~~~~~  240 (404)
T 1e5e_A          177 EGVLVIADNTFCSPMIT---NPV-DF----GVDVVVHSATKYINGHTDVVAGLICGKADL--------LQQIRMVGIKDI  240 (404)
T ss_dssp             TTCEEEEECTTTCTTTC---CGG-GG----TCSEEEEETTTTTTCSSCCCCEEEEECHHH--------HHHHHHTCCCCC
T ss_pred             cCCEEEEECCCchhhhC---Ccc-cc----CCEEEEEcCccccCCCCCCeEEEEEECHHH--------HHHHHHHHHHhC
Confidence            99999999999986643   122 22    35699999999999999998 999999887        44 565554443


Q ss_pred             -cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-C--------------eEecCC---CceEEEee
Q 036024          155 -FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-I--------------KVYGGI---NAPYVWAH  215 (272)
Q Consensus       155 -~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------------~~~~~~---~~~~~~i~  215 (272)
                       ....+.+.+.++.+.++.     ...+.++..++.+.+.+.+++.. +              ++..++   .+.++.++
T Consensus       241 ~g~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~  315 (404)
T 1e5e_A          241 TGSVISPHDAWLITRGLST-----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFI  315 (404)
T ss_dssp             CCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEE
T ss_pred             CCCCCCHHHHHHHHHhHhH-----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEE
Confidence             344777888877777763     24455566777777777777652 2              122221   14444448


Q ss_pred             cCCCChHHHHHHHHHhcCeEeeCCCCCCC-----------------------CC--CCeEEEEccCCHHHHHHHHHHHHH
Q 036024          216 FPGRKSWDVFAEILEKTHITTVPGSGFGP-----------------------GG--EEYIRISGFGHRESILEASRRLEA  270 (272)
Q Consensus       216 l~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----------------------~~--~~~~R~s~~~~~~~i~~~l~~l~~  270 (272)
                      +++  ..+...+++++.|| +.+|..|+.                       .+  ++++|+|+..  |+++++++.|++
T Consensus       316 ~~~--~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~--e~~~~li~~l~~  390 (404)
T 1e5e_A          316 LKS--GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI--EDADELIADFKQ  390 (404)
T ss_dssp             ETT--HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHH
T ss_pred             eCC--CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHH
Confidence            864  23446667888899 556665542                       22  5899999876  677777777766


Q ss_pred             h
Q 036024          271 L  271 (272)
Q Consensus       271 ~  271 (272)
                      +
T Consensus       391 a  391 (404)
T 1e5e_A          391 G  391 (404)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.94  E-value=1.5e-25  Score=192.14  Aligned_cols=202  Identities=17%  Similarity=0.157  Sum_probs=151.5

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++++|+||||.+ .+.+++++|.++|+++|+++|+||+|.++...+...++..+....+ ++   |+||.++ +
T Consensus       171 ~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d-~~---s~SK~~~-~  245 (375)
T 2eh6_A          171 EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPD-VI---ALAKGLG-G  245 (375)
T ss_dssp             TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCS-EE---EECGGGG-T
T ss_pred             CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCC-EE---EEccccc-C
Confidence            578999999999999999 5688899999999999999999999997654442233333321222 22   7889998 7


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK  202 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~  202 (272)
                      |+|+||+++++++.        +.+.........+.+.+.+.++.++++..     ++..++++++++++.+.|++++..
T Consensus       246 g~~~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~~~  312 (375)
T 2eh6_A          246 GVPIGAILAREEVA--------QSFTPGSHGSTFGGNPLACRAGTVVVDEV-----EKLLPHVREVGNYFKEKLKELGKG  312 (375)
T ss_dssp             TSCCEEEEEEHHHH--------TTCCTTSCCCSSTTCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             CCCeEEEEEcHHHH--------hhhcCCCCCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999988763        33332222233456778888777766532     267788999999999999988654


Q ss_pred             EecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          203 VYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       203 ~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ... ..++++|+.++. +..++...|.+ +||.+.|+.      .+++|+++  ..+++++++++++|+++|
T Consensus       313 ~~~-~~g~~~~~~~~~-~~~~~~~~l~~-~gi~~~~~~------~~~iRi~~~~~~~~~~i~~~~~~l~~~l  375 (375)
T 2eh6_A          313 KVK-GRGLMLGLELER-ECKDYVLKALE-KGLLINCTA------GKVLRFLPPLIIQKEHIDRAISVLREIL  375 (375)
T ss_dssp             EEE-EETTEEEEECSS-CCHHHHHHHHH-TTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred             Cce-EEEEEEEEEEcC-cHHHHHHHHHH-CCCEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence            443 357899999975 45677777765 599998863      57899995  468999999999999875

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.94  E-value=6.7e-27  Score=200.06  Aligned_cols=240  Identities=13%  Similarity=0.054  Sum_probs=169.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEee--cCCCCCcccCCCC-----C-----CCceEEEEecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLE--CGPGNNFFPDLKG-----T-----SRTDIIFFCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~--~~~~~~~~~dl~~-----~-----~~~~~i~~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..+.+. +...++..| +++.+|  .+++  +.+|++.     .     ++++++++++|+||||.+++   +++
T Consensus        94 d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~---~~~  168 (371)
T 2e7j_A           94 AWVVMDENCHYSSYVAAERAGLNIALVPKTDYPD--YAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKK  168 (371)
T ss_dssp             CEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTT--CCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---HHH
T ss_pred             CEEEEccCcchHHHHHHHHcCCeEEEeecccCCC--CCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCC---HHH
Confidence            56677666554 667778888 999999  6544  4444332     1     57899999999999999998   699


Q ss_pred             HHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024           70 LVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR  149 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~  149 (272)
                      |.++|+++|+++|+|++|..+...   .++..+.    ..++++|+||.++ ++.|+||++++++.+...       +..
T Consensus       169 i~~~~~~~~~~li~D~a~~~~~~~---~~~~~~~----~di~~~s~sK~~~-~~~~~G~~~~~~~~~~~~-------~~~  233 (371)
T 2e7j_A          169 IAKVCSEYDVPLLVNGAYAIGRMP---VSLKEIG----ADFIVGSGHKSMA-ASGPIGVMGMKEEWAEIV-------LRR  233 (371)
T ss_dssp             HHHHHHTTTCCEEEECTTTBTTBC---CCHHHHT----CSEEEEEHHHHSS-CCSSCEEEEECTTTTTTT-------TCB
T ss_pred             HHHHHHHcCCeEEEECccccCCCC---CChhhcC----CCEEEecCCcCCC-CCCCcEEEEEechhhhhh-------ccc
Confidence            999999999999999999875432   2333332    2389999999998 445999999998773220       211


Q ss_pred             hhh--hc-----cCCcchHHHHHHHHhcccccHHHHHHHHHHH--HHHHHHHHHHHHhCCCeEecCC--CceEEEeecCC
Q 036024          150 IIC--TC-----FNGASNIAQAGGLACLSSEGLEAVHSVVDYY--KENTKILIDTLASLGIKVYGGI--NAPYVWAHFPG  218 (272)
Q Consensus       150 ~~~--~~-----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~g~~~~~~~--~~~~~~i~l~~  218 (272)
                      ...  ..     ..+.+...+.++.+.++... .   +..+++  +++++++.+.|+++|+++..+.  .+.++|+.++ 
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-  308 (371)
T 2e7j_A          234 SEKYKNKEVELLGCTARGATIITLMASFPHVR-E---RIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAE-  308 (371)
T ss_dssp             CSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHH-H---HGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECH-
T ss_pred             cccCcccccccccCCcCHHHHHHHHHHHHHHH-H---HHHHHHHHHHHHHHHHHHHHHcCcEEecCCCccCceEEEECC-
Confidence            111  11     23345555554545544211 1   566777  8999999999998899888764  4778999987 


Q ss_pred             CChHHHHHHHHHhcCeEeeCCCCCCC----CCCCeEE-EEcc---CCHHHHHHHHHHHHHh
Q 036024          219 RKSWDVFAEILEKTHITTVPGSGFGP----GGEEYIR-ISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       219 ~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~~~~R-~s~~---~~~~~i~~~l~~l~~~  271 (272)
                       +..++...|. ++||.+.| ..+..    ..++++| +++.   .+++++++++++|+++
T Consensus       309 -~~~~~~~~l~-~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~  366 (371)
T 2e7j_A          309 -VLYEISKKAK-GGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEI  366 (371)
T ss_dssp             -HHHHHHHHSS-SGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHH-HCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHH
Confidence             4455555555 66999988 43322    1257899 9986   6899999999999875

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=5.9e-25  Score=190.34  Aligned_cols=245  Identities=14%  Similarity=0.126  Sum_probs=169.8

Q ss_pred             cccccccCccc-chHHhcc----cc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGK----YC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~----~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..+.+. +...+..    .| +++.++++++ ++.+|++.     .+++++|++++|+||||.+++   +++|.+
T Consensus       114 d~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~  189 (406)
T 3cai_A          114 YEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE-TGELPTWQWESLISKSTRLVAVNSASGTLGGVTD---LRAMTK  189 (406)
T ss_dssp             CEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT-TCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCC---CHHHHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc-cCCcCHHHHHHHhCCCceEEEEeCCcCCccccCC---HHHHHH
Confidence            55666665444 3333332    57 9999998743 34455444     267899999999999999998   889999


Q ss_pred             HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcccee-EEEecccccccCCcchHHHHHhhh
Q 036024           73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLG-WTVVPEELLFSSGFPVINDFNRII  151 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G-~~~~~~~~~~~~~~~~~~~~~~~~  151 (272)
                      +|+++|+++|+|++|....   .+..+..+    +..+++.|+||.+| ++  +| |++++++..        +.+....
T Consensus       190 l~~~~~~~li~D~a~~~g~---~~~~~~~~----~~d~~~~s~~K~~g-~~--~G~~~~~~~~~~--------~~l~~~~  251 (406)
T 3cai_A          190 LVHDVGALVVVDHSAAAPY---RLLDIRET----DADVVTVNAHAWGG-PP--IGAMVFRDPSVM--------NSFGSVS  251 (406)
T ss_dssp             HHHHTTCEEEEECTTTTTT---CCCCHHHH----CCSEEEEEGGGGTS-CS--CEEEEESCHHHH--------HTSCCCC
T ss_pred             HHHHcCCEEEEEcccccCC---CCCCchhc----CCCEEEeehhhhcC-CC--cCeEEEEehHHH--------hhcCCcc
Confidence            9999999999999997421   12223333    23488999999887 65  89 999988763        2222111


Q ss_pred             ---------hhccCCcchHHHHHHHHhcc---ccc-----------HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC
Q 036024          152 ---------CTCFNGASNIAQAGGLACLS---SEG-----------LEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI  207 (272)
Q Consensus       152 ---------~~~~~~~~~~~~~a~~~~l~---~~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~  207 (272)
                               .....+.+...+.++.++++   ..+           .+++++++++++++++++.+.|+++ |+++..+.
T Consensus       252 ~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  331 (406)
T 3cai_A          252 TNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRP  331 (406)
T ss_dssp             SCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCC
T ss_pred             cCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCc
Confidence                     11123355555544444443   111           0157889999999999999999987 88887653


Q ss_pred             --CceEEEeecCCCChHHHHHHHHHhcCeEeeCCC------CCCC-CCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024          208 --NAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS------GFGP-GGEEYIRISGFG--HRESILEASRRLEAL  271 (272)
Q Consensus       208 --~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~------~~~~-~~~~~~R~s~~~--~~~~i~~~l~~l~~~  271 (272)
                        .+.++++.+++.+..++...|.+ +||.+.+|.      .|+. .+.+++|+++..  +++++++++++|+++
T Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~L~~-~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~  405 (406)
T 3cai_A          332 EAQIPVVSFAVHKVPADRVVQRLAD-NGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL  405 (406)
T ss_dssp             SSBCSEEEEEETTBCHHHHHHHHHH-TTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred             cccCCEEEEEECCcCHHHHHHHHHH-CCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence              24478888876566667766654 599999987      3332 235789999754  899999999999875

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.93  E-value=3.4e-25  Score=189.89  Aligned_cols=247  Identities=11%  Similarity=0.054  Sum_probs=170.3

Q ss_pred             cccccccC-ccc--chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQ-AGD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~-~~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+ ++.  +...+...| +++.++.+.+..+.+| +++  .++++++++++|+||||.+++   +++|+++|++
T Consensus        96 d~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~  172 (376)
T 3f0h_A           96 DKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD---TMMIGEFCKK  172 (376)
T ss_dssp             CCEEEEESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC---HHHHHHHHHH
T ss_pred             CeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceEEEEecccCCcceecC---HHHHHHHHHH
Confidence            56666653 333  224566678 9999998765444444 333  368899999999999999999   9999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhh----
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRII----  151 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~----  151 (272)
                      +|+++|+|+++..+...   ..+...    +..+++.|+||.++ .+|  +|+++++++.        .+.+....    
T Consensus       173 ~~~~li~D~~~~~~~~~---~~~~~~----~~d~~~~s~~K~l~~~~G--~g~~~~~~~~--------~~~~~~~~~~~~  235 (376)
T 3f0h_A          173 NNMFFVCDCVSAFLADP---FNMNEC----GADVMITGSQKVLACPPG--ISVIVLAPRG--------VERVEKSKVRTM  235 (376)
T ss_dssp             TTCEEEEECTTTTTTSC---CCHHHH----TCSEEEEETTTTTCCCSS--CEEEEECHHH--------HHHHHTCCCCCS
T ss_pred             cCCEEEEEcCccccCcc---cccccc----CccEEEecCcccccCCCc--eEEEEECHHH--------HHHhhcCCCCce
Confidence            99999999998853321   122222    12388999999998 556  6888888877        33332210    


Q ss_pred             -------------hhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCce-EEEeec
Q 036024          152 -------------CTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLGIKVYGGINAP-YVWAHF  216 (272)
Q Consensus       152 -------------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~~i~l  216 (272)
                                   ..+..+++...+.++.+.+...... .+++.+++++++++++.+.|+++|+.+..+.... ++.+..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  315 (376)
T 3f0h_A          236 YFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHP  315 (376)
T ss_dssp             TTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEE
T ss_pred             eecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeC
Confidence                         1123345554444454544422222 4688899999999999999999888776643332 233334


Q ss_pred             CCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          217 PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       217 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ++.+..++...|.+++||.+.+|.  +..+.+++|+++  ..+++++++++++|++++
T Consensus       316 ~~~~~~~l~~~l~~~~gi~v~~g~--~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l  371 (376)
T 3f0h_A          316 TTANAYDIFLKLKDEYGIWICPNG--GEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQ  371 (376)
T ss_dssp             SSSCHHHHHHHHHHHSSEECEECC--GGGTTTCEEEECCSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCEEEecCc--cccCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence            455677788888877799999984  333468999997  458999999999998763

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.93  E-value=2.4e-25  Score=190.74  Aligned_cols=250  Identities=12%  Similarity=0.068  Sum_probs=166.9

Q ss_pred             cccccccCccc-chHH---hcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDE---VGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~---~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+. +...   ++..| +++.+|.+++..+.++ +++  .++++++++++|+||||.+++   +++|.++|+
T Consensus        89 d~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~  165 (382)
T 4hvk_A           89 KHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VEEISEVLA  165 (382)
T ss_dssp             CEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHS
T ss_pred             CEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---HHHHHHHHH
Confidence            45666554433 4443   33357 9999999855333333 222  267899999999999999988   789999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      ++|+ +|+|++|.....   +..+...    +..++++|+||.+|.+|  +|+++++++...   ...............
T Consensus       166 ~~~~-li~D~a~~~~~~---~~~~~~~----~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~---~~~~~~~~~~~~~~~  232 (382)
T 4hvk_A          166 GKAA-LHIDATASVGQI---EVDVEKI----GADMLTISSNDIYGPKG--VGALWIRKEAKL---QPVILGGGQENGLRS  232 (382)
T ss_dssp             SSSE-EEEECTTTBTTB---CCCHHHH----TCSEEEEESGGGTSCTT--CEEEEEETTCCC---CCSSCSSCTGGGTSC
T ss_pred             HcCE-EEEEhHHhcCCC---CCCchhc----CCCEEEEeHHHhcCCCc--eEEEEEcCccCc---CcccccCCCcCcccc
Confidence            9999 999999874211   1222222    22389999999887556  788887765411   111100001112223


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC---ceEEEeecCCCChHHHHHHHHHh
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN---APYVWAHFPGRKSWDVFAEILEK  231 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~~~~~i~l~~~~~~~~~~~ll~~  231 (272)
                      .+.+...+.++.+.+. ...+++++.+++++++++++.+.|+++ |+++..+..   +.++++.+++.+..++...|. +
T Consensus       233 ~~~~~~~~~~~~~al~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~  310 (382)
T 4hvk_A          233 GSENVPSIVGFGKAAE-ITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLD-M  310 (382)
T ss_dssp             SCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTCCHHHHHHHHH-H
T ss_pred             CCcCHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCCCHHHHHHHHH-H
Confidence            3456666666666655 223577889999999999999999987 888876543   347777777666667666665 4


Q ss_pred             cCeEeeCCCCCCCCC-----------------CCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          232 THITTVPGSGFGPGG-----------------EEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~-----------------~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      +||.+.+|+.|+...                 .+++|+++.  .+++++++++++|+++
T Consensus       311 ~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~  369 (382)
T 4hvk_A          311 AGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGV  369 (382)
T ss_dssp             TTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence            599999998887543                 588999975  4899999999999875

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.93  E-value=9.1e-26  Score=195.82  Aligned_cols=245  Identities=15%  Similarity=0.042  Sum_probs=172.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCCC---CCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKGT---SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+++. +...+...| ++++++...     ++ +++.   .+++++++++|+||||.+++   +++|+++|+++
T Consensus       144 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~d-----~~~le~~l~~~~~~~vi~~~~~nptG~~~~---l~~l~~la~~~  215 (409)
T 3kki_A          144 TNVYIDFFAHMSLWEGARYANAQAHPFMHNN-----CDHLRMLIQRHGPGIIVVDSIYSTLGTIAP---LAELVNISKEF  215 (409)
T ss_dssp             CEEEEETTSCHHHHHHHHHTTCEEEEECTTC-----HHHHHHHHHHHCSCEEEEESBCTTTCCBCC---HHHHHHHHHHH
T ss_pred             CEEEECCCcCHHHHHHHHHcCCeEEEecCCC-----HHHHHHHHHhcCCeEEEECCCCCCCCCcCC---HHHHHHHHHHc
Confidence            55666666655 556666677 888776521     11 2221   35799999999999999998   89999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccc-cCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh--hhc
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYE-IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII--CTC  154 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~  154 (272)
                      |+++|+||+|.++.++........ .....+..++++|+||.+|.+|   ||++++++..        +.+....  ...
T Consensus       216 ~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~~~~--------~~~~~~~~~~~~  284 (409)
T 3kki_A          216 GCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNNEVN--------RCVPFISYPAIF  284 (409)
T ss_dssp             TCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESSSGG--------GTHHHHCHHHHH
T ss_pred             CCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECHHHH--------HHHHHhCcCccc
Confidence            999999999987555432222222 2222234489999999998554   9999988873        3333221  112


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC-ChHHHHHHHHHhcC
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTH  233 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~g  233 (272)
                      ..+.+...+.++.+.++..  +..++.+++++++++++.+.|+++|+++.+  .++++|+.++.. ...++...|+++ |
T Consensus       285 ~~~~~~~~~aa~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~-G  359 (409)
T 3kki_A          285 SSTLLPYEAAGLETTLEII--ESADNRRQHLDRMARKLRIGLSQLGLTIRS--ESQIIGLETGDERNTEKVRDYLESN-G  359 (409)
T ss_dssp             SBCCCHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTTTCCCCC--SSSEEEEEEESHHHHHHHHHHHHHT-T
T ss_pred             cCCCcHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCccCC--CCCEEEEEeCCHHHHHHHHHHHHHC-C
Confidence            2235555666666665522  122678889999999999999999887763  688899988742 344567777766 9


Q ss_pred             eEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          234 ITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       234 i~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      |.+.|+..+. +.+.+++|+++.  .+++++++++++|++++
T Consensus       360 v~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l  401 (409)
T 3kki_A          360 VFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAV  401 (409)
T ss_dssp             EECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             ceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence            9998865442 445789999974  58999999999998763

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.93  E-value=1.9e-25  Score=193.46  Aligned_cols=205  Identities=13%  Similarity=0.100  Sum_probs=155.4

Q ss_pred             CCceEEEEecCCCccccCC--CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA--TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~--~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++++++++ |+||||.++  +.+++++|+++|++||+++|+||+|.++.+.+.+......... .+++   |+||.++ 
T Consensus       182 ~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-~d~~---t~sK~~~-  255 (406)
T 4adb_A          182 DSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVT-PDLL---TTAKALG-  255 (406)
T ss_dssp             TTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCC-CSEE---EECGGGG-
T ss_pred             CCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCC-CCEE---Eechhhc-
Confidence            678888888 999999998  9999999999999999999999999977665544333333222 2323   6799999 


Q ss_pred             CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-  200 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-  200 (272)
                      +|+|+||++++++.        .+.+.........+.+.+.+.++.+.++....   ++..++++++++++.+.|++++ 
T Consensus       256 ~G~r~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~  324 (406)
T 4adb_A          256 GGFPVGALLATEEC--------ARVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINH  324 (406)
T ss_dssp             TTSCCEEEEECHHH--------HHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEEcHHH--------HhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998887        44554444455566888999888888864322   5677888889999998888752 


Q ss_pred             ---CeEecCCCceEEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          201 ---IKVYGGINAPYVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       201 ---~~~~~~~~~~~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                         ........+.++|+.++..   ...++...+.++ ||.+.|+.      .+++|++  +..+++++++++++|++++
T Consensus       325 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~------~~~iRi~~~~~~~~e~i~~~~~~l~~~l  397 (406)
T 4adb_A          325 RYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKA-GVMVLIAG------GNVVRFAPALNVSEEEVTTGLDRFAAAC  397 (406)
T ss_dssp             HHCCEEEEEEETTEEEEEECTTTTTCHHHHHHHHHHT-TEECEESS------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             hCCCceEEEEEEEEEEEEEeCCcHHHHHHHHHHHHHC-CcEEeecC------CCeEEEECCCCCCHHHHHHHHHHHHHHH
Confidence               1111222477889998753   466777777766 99998864      6799995  5679999999999998763

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.93  E-value=2.8e-25  Score=189.37  Aligned_cols=233  Identities=14%  Similarity=0.002  Sum_probs=156.7

Q ss_pred             ccc-eeEEeecCCCCCcccC-CCC-CCCceEEEEecCCCcc-ccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCC
Q 036024           21 KYC-NIEYLECGPGNNFFPD-LKG-TSRTDIIFFCSPNNPT-GHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP   96 (272)
Q Consensus        21 ~~g-~~~~~~~~~~~~~~~d-l~~-~~~~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~   96 (272)
                      ..| ++++++.+ +..+.++ +++ .++++++++++||||| |.+++.+++++|+++|+++|+++|+|++|..+......
T Consensus       111 ~~g~~~~~v~~~-~~~~d~~~l~~~~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~  189 (359)
T 3pj0_A          111 LQQITPLLLGTA-NQLLTIDDIKSLREPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQ  189 (359)
T ss_dssp             HHCCEEEECSCT-TSCCCHHHHHTCSSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHT
T ss_pred             hcCceEEecCCc-CCCcCHHHHHhccCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhC
Confidence            356 88888763 2233333 332 3689999999999998 79999999999999999999999999998754321111


Q ss_pred             CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC--CcchHHHHHHHHhccccc
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN--GASNIAQAGGLACLSSEG  174 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~  174 (272)
                      .+...+....+  +++.|+||.++.++ . ||++.++++        ++.+.........  ........++...+..  
T Consensus       190 ~~~~~~~~~~d--~~~~s~sK~~~~~~-g-g~~~~~~~l--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--  255 (359)
T 3pj0_A          190 KSAEEICALFD--SVYVSFYKGIGGIA-G-AILAGNDDF--------VQEAKIWKRRYGGDLISLYPYILSADYYFEK--  255 (359)
T ss_dssp             CCHHHHHTTCS--EEEEESSSTTCCSS-C-EEEEECHHH--------HHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH--
T ss_pred             CCHHHhhccCC--EEEEeccccCCCcc-e-EEEECCHHH--------HHHHHHHHHHhCCCcchhHHHHHHHHHHHHH--
Confidence            22222221223  55668999887553 2 777778777        5555544322221  1222223333333321  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEe-cCCCceEEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCe
Q 036024          175 LEAVHSVVDYYKENTKILIDTLASL-GIKVY-GGINAPYVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGGEEY  249 (272)
Q Consensus       175 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~  249 (272)
                        + .+..++++++++++.+.|+++ |+++. .+..++++|+.++..   +..++... +.++||.+.||..|+..+.++
T Consensus       256 --~-~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~GV~v~~g~~~~~~~~~~  331 (359)
T 3pj0_A          256 --R-IGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKI-QDETGVGISGYLQEKSADVCA  331 (359)
T ss_dssp             --H-GGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHH-HHHHCEECCSCCEEEETTEEE
T ss_pred             --H-HHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHHHHHH-HHhcCcEecCCccccCCCceE
Confidence              1 234455788899999999998 89885 566788899988742   23344444 455699999998887656788


Q ss_pred             EEEEcc-----CCHHHHHHHHHHHHHhC
Q 036024          250 IRISGF-----GHRESILEASRRLEALF  272 (272)
Q Consensus       250 ~R~s~~-----~~~~~i~~~l~~l~~~l  272 (272)
                      +|+++.     .+.+++++++++|.++|
T Consensus       332 ~r~~i~~~~~~~~~e~l~~~l~~l~~~l  359 (359)
T 3pj0_A          332 FEVSVGDAFAEIPAKNLELVFRCLEKEL  359 (359)
T ss_dssp             EEEECCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred             EEEEecCccccCCHHHHHHHHHHHHhcC
Confidence            999863     47899999999999875

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.93  E-value=9.7e-25  Score=188.98  Aligned_cols=247  Identities=18%  Similarity=0.152  Sum_probs=171.0

Q ss_pred             cccccccCccc-c---hHHhcccc-eeEEeecCCC-CCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHH
Q 036024            4 DSSVIVGQAGD-L---EDEVGKYC-NIEYLECGPG-NNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLV   71 (272)
Q Consensus         4 d~~~~~~~~~~-~---~~~~~~~g-~~~~~~~~~~-~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~   71 (272)
                      |.|++..+.+. +   ...++..| ++.+++.+.+ .++.+|++.+      ++++++++++|+||  ...+   +++|.
T Consensus       110 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~---l~~i~  184 (407)
T 2dkj_A          110 DTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RFWD---FKAFR  184 (407)
T ss_dssp             CEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SCCC---HHHHH
T ss_pred             CEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CCCC---HHHHH
Confidence            55666665544 4   23445556 5555555322 2455664432      37899999999998  4555   89999


Q ss_pred             HHHHHcCCEEEEcccCCc-cccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHh
Q 036024           72 EFARNNGSIIIFDSAYAA-YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNR  149 (272)
Q Consensus        72 ~~~~~~~~~vi~D~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~  149 (272)
                      ++|+++|+++|+||+|.. +.+.+...+.  +.   ...++++|+||.+  +|.|+||++++ +++        .+.+..
T Consensus       185 ~l~~~~~~~li~Dea~~~g~~~~~~~~~~--~~---~~di~~~s~sK~l--~g~~~G~~~~~~~~~--------~~~l~~  249 (407)
T 2dkj_A          185 EIADEVGAYLVVDMAHFAGLVAAGLHPNP--LP---YAHVVTSTTHKTL--RGPRGGLILSNDPEL--------GKRIDK  249 (407)
T ss_dssp             HHHHHHTCEEEEECTTTHHHHHTTCSCCC--TT---TCSEEEEESSGGG--CCCSCEEEEESCHHH--------HHHHHH
T ss_pred             HHHHHcCCEEEEEccccccccccCccCCc--cc---cccEEEEeccccC--CCCCceEEEECCHHH--------HHHHHh
Confidence            999999999999999997 4444322221  11   1358899999955  57889999998 566        455555


Q ss_pred             hhhhcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCC--CChHHHH
Q 036024          150 IICTCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPG--RKSWDVF  225 (272)
Q Consensus       150 ~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~--~~~~~~~  225 (272)
                      ...... .+.+.....++.+++......++++.+++++++++++.+.|+++|+++.. +..++++|+.++.  .+..++.
T Consensus       250 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (407)
T 2dkj_A          250 LIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAE  329 (407)
T ss_dssp             HHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHH
T ss_pred             hhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCceeecCCCCceEEEEECcccCCCHHHHH
Confidence            443322 23344334355555553223567889999999999999999998998875 3578899999973  3455555


Q ss_pred             HHHHHhcCeEeeCCCCC----CCCCCCeEEEEcc------CCHHHHHHHHHHHHHh
Q 036024          226 AEILEKTHITTVPGSGF----GPGGEEYIRISGF------GHRESILEASRRLEAL  271 (272)
Q Consensus       226 ~~ll~~~gi~v~~g~~~----~~~~~~~~R~s~~------~~~~~i~~~l~~l~~~  271 (272)
                      ..| .++||.+.+|..|    .+..++++|+++.      .+++++++++++|+++
T Consensus       330 ~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~  384 (407)
T 2dkj_A          330 ERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRA  384 (407)
T ss_dssp             HHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHH
T ss_pred             HHH-HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHH
Confidence            555 5669999998764    2334678999973      6899999999999875

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.93  E-value=8.3e-25  Score=190.38  Aligned_cols=252  Identities=13%  Similarity=0.084  Sum_probs=169.5

Q ss_pred             cccccccCccc-chHHh---cccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEV---GKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~---~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+. +...+   ...| +++.+|.+++..+.++ +++  .++++++++++|+||||.+++   +++|+++|+
T Consensus       114 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~  190 (423)
T 3lvm_A          114 KHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQD---IAAIGEMCR  190 (423)
T ss_dssp             CEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHH
T ss_pred             CEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccC---HHHHHHHHH
Confidence            55666655444 55555   4448 9999998764333333 222  267899999999999999999   888999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      ++|+++|+||+|+....   +..+...    +..++++|+||.+|.+|  +||++++++......+ .............
T Consensus       191 ~~~~~li~Dea~~~~~~---~~~~~~~----~~di~~~s~sK~~g~~g--~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~  260 (423)
T 3lvm_A          191 ARGIIYHVDATQSVGKL---PIDLSQL----KVDLMSFSGHKIYGPKG--IGALYVRRKPRVRIEA-QMHGGGHERGMRS  260 (423)
T ss_dssp             HHTCEEEEECTTTTTTS---CCCTTTS----CCSEEEEESTTTTSCSS--CEEEEECBTTBCCCCC-SSCSSCTTTTTCC
T ss_pred             HcCCEEEEEhhhhcCCC---CcChhhc----CCCEEEechHHhcCCCC--eEEEEEeccccCCCCc-cccCCcccccccC
Confidence            99999999999875221   1122222    23489999999888666  8999998876432111 1000000001223


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCC---ceEEEeecCCCChHHHHHHHHHh
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGIN---APYVWAHFPGRKSWDVFAEILEK  231 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~~~~~i~l~~~~~~~~~~~ll~~  231 (272)
                      .+.+...+.++.+++. ...+++++.+++++++++++.+.|+++ |+.+..+.+   +.++++.+++.+..++...| .+
T Consensus       261 ~~~~~~~~~a~~~al~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~  338 (423)
T 3lvm_A          261 GTLPVHQIVGMGEAYR-IAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMAL-KD  338 (423)
T ss_dssp             SCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTSCHHHHHHHT-TT
T ss_pred             CCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCCCHHHHHHHH-hh
Confidence            3456666666656655 222347889999999999999999988 888887654   35666677765666666555 44


Q ss_pred             cCeEeeCCCCCCCCC-----------------CCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPGG-----------------EEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~-----------------~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                        |.+.+|..|.+..                 .+++|+++.  .+++++++++++|++++
T Consensus       339 --i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~  396 (423)
T 3lvm_A          339 --LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSI  396 (423)
T ss_dssp             --EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             --heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHH
Confidence              9999998876521                 478999974  48899999999998753

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.92  E-value=2e-24  Score=185.55  Aligned_cols=251  Identities=12%  Similarity=0.050  Sum_probs=171.4

Q ss_pred             cccccc-cCccc-c-hHHhcccc-eeEEeec-CCCCCcccCCCCC-----C-CceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIV-GQAGD-L-EDEVGKYC-NIEYLEC-GPGNNFFPDLKGT-----S-RTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~-~~~~~-~-~~~~~~~g-~~~~~~~-~~~~~~~~dl~~~-----~-~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++. ++++. + ...++..| +++.++. +.  ++.+|++.+     + +++++++++|+||||.+++   +++|++
T Consensus        87 d~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~  161 (385)
T 2bkw_A           87 KNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKI--GESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSD---LKAISQ  161 (385)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHTTCEEEEECCSST--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHH
T ss_pred             CeEEEEcCCcchHHHHHHHHHcCCceEEEecCCC--CCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcC---HHHHHH
Confidence            556555 44444 3 35566778 9999998 54  344553331     3 7899999999999999998   789999


Q ss_pred             HHHHc--CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccc-cCCc-------
Q 036024           73 FARNN--GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLF-SSGF-------  141 (272)
Q Consensus        73 ~~~~~--~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~-~~~~-------  141 (272)
                      +|+++  |+++|+|++|....   .+..+..+    +..++++|+||.++ .+|  +||++++++.+. ....       
T Consensus       162 ~~~~~~~~~~li~D~a~~~~~---~~~~~~~~----~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~  232 (385)
T 2bkw_A          162 AIKQTSPETFFVVDAVCSIGC---EEFEFDEW----GVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVH  232 (385)
T ss_dssp             HHHHHCTTSEEEEECTTTTTT---SCCCTTTT----TCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCS
T ss_pred             HHHhhCCCCEEEEECccccCC---cccccccc----CceEEEecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCC
Confidence            99999  99999999997421   11222222    23488999999664 566  599999887632 1100       


Q ss_pred             -------chHHHHHhhhhh---ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH-HhCCCeEecC----
Q 036024          142 -------PVINDFNRIICT---CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL-ASLGIKVYGG----  206 (272)
Q Consensus       142 -------~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~g~~~~~~----  206 (272)
                             +.......+...   ...+.+...+.++.++++......+++.+++++++++++.+.| +++|+++..+    
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~  312 (385)
T 2bkw_A          233 GYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSN  312 (385)
T ss_dssp             CSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSST
T ss_pred             ceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCccc
Confidence                   000001111111   1234666776666666653222236788899999999999999 8888888753    


Q ss_pred             -CCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE-cc-----CCHHHHHHHHHHHHHhC
Q 036024          207 -INAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS-GF-----GHRESILEASRRLEALF  272 (272)
Q Consensus       207 -~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s-~~-----~~~~~i~~~l~~l~~~l  272 (272)
                       ..++++|+.+++  ..++...|. ++||.+.+|..+. ...+++|++ +.     .+++++++++++|++++
T Consensus       313 ~~~~~~~~~~~~~--~~~~~~~l~-~~gi~v~~g~~~~-~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~  381 (385)
T 2bkw_A          313 MSAHGLTAVYVAD--PPDVIAFLK-SHGVVIAGGIHKD-IGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLAL  381 (385)
T ss_dssp             TBCSSCEEEECSC--HHHHHHHHH-HTTEECBCCCCTT-TGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHT
T ss_pred             ccCCceEEEecCC--HHHHHHHHH-HCCeEEeCCCCcc-cCCCEEEEEccccccccCCHHHHHHHHHHHHHHH
Confidence             247889999875  556666665 4599999987653 236789999 54     48999999999998864

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.92  E-value=3.1e-25  Score=193.29  Aligned_cols=205  Identities=14%  Similarity=0.128  Sum_probs=145.0

Q ss_pred             CCceEEEEe-cCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFC-SPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~-~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++++|+++ +++| || .+++.+++++|+++|+++|+++|+||+|.++.+.+....+... +.   .+.+.||||.+| 
T Consensus       198 ~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~---~~di~s~sK~~~-  271 (426)
T 1sff_A          198 EDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQM-GV---APDLTTFAKSIA-  271 (426)
T ss_dssp             GGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGT-TS---CCSEEEECGGGG-
T ss_pred             CceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhc-CC---CCCEEEEccccc-
Confidence            356777775 5678 99 8889999999999999999999999999987655432222222 11   123449999999 


Q ss_pred             CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--  199 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--  199 (272)
                      +|+|+||++++++++        +.+.......+.+.+.+++.++.++++....   .+..++++++++++++.|+++  
T Consensus       272 ~GlriG~~~~~~~~~--------~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~  340 (426)
T 1sff_A          272 GGFPLAGVTGRAEVM--------DAVAPGGLGGTYAGNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDGLLAIAE  340 (426)
T ss_dssp             TSSCCEEEEEEHHHH--------TTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEEcHHHH--------hhhccCCcCcCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH
Confidence            599999999998773        3333222334455788888888877752221   234566777777777777653  


Q ss_pred             --C-CeEecCCCceEEEeecCC---------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHH
Q 036024          200 --G-IKVYGGINAPYVWAHFPG---------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEAS  265 (272)
Q Consensus       200 --g-~~~~~~~~~~~~~i~l~~---------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l  265 (272)
                        . +....+ .|+++|+.++.         .+..++...|+++ ||.+.||..+    .+++|+++  ..+++++++++
T Consensus       341 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~~~~~----~~~iRi~~~~~~~~~~i~~~~  414 (426)
T 1sff_A          341 KHPEIGDVRG-LGAMIAIELFEDGDHNKPDAKLTAEIVARARDK-GLILLSCGPY----YNVLRILVPLTIEDAQIRQGL  414 (426)
T ss_dssp             TCTTEEEEEE-ETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHT-TEECEEESTT----SCEEEECCCTTCCHHHHHHHH
T ss_pred             hCCCeEEEEE-EEEEEEEEEecCccccCCChHHHHHHHHHHHHC-CcEEecCCCC----CCEEEEECCccCCHHHHHHHH
Confidence              2 233334 37899999842         1245566666655 9999998764    57899996  56999999999


Q ss_pred             HHHHHh
Q 036024          266 RRLEAL  271 (272)
Q Consensus       266 ~~l~~~  271 (272)
                      ++|+++
T Consensus       415 ~~l~~~  420 (426)
T 1sff_A          415 EIISQC  420 (426)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.92  E-value=7.3e-25  Score=189.32  Aligned_cols=252  Identities=14%  Similarity=0.064  Sum_probs=154.9

Q ss_pred             ccccccC-cccchHHh---cccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            5 SSVIVGQ-AGDLEDEV---GKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         5 ~~~~~~~-~~~~~~~~---~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      .|++..+ ++.+....   +..| +++.+|.+++..+.++ +++  .++++++++++|+||||.+++   +++|.++|++
T Consensus       111 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~  187 (400)
T 3vax_A          111 HIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQP---VAELAQQLRA  187 (400)
T ss_dssp             EEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHTT
T ss_pred             EEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCc---HHHHHHHHHh
Confidence            5666544 33343333   3457 9999998765333333 333  267899999999999999998   7899999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEE-ecccccc---cCCcchHHHHHhhhh
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTV-VPEELLF---SSGFPVINDFNRIIC  152 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~-~~~~~~~---~~~~~~~~~~~~~~~  152 (272)
                      +|+++|+|++|.....   +..+..+     ..++++|+||.+|.+|  +|+++ ++++.+.   ..+............
T Consensus       188 ~~~~li~D~a~~~~~~---~~~~~~~-----~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (400)
T 3vax_A          188 TPTYLHVDAAQGYGKV---PGDLTTP-----IDMISISGHKIGAPKG--VGALVTRRREEMDDERVPLEPIMFGGGQERK  257 (400)
T ss_dssp             SSCEEEEECTTTTTTS---GGGGGSC-----CSEEEEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGG
T ss_pred             cCCEEEEEhhhhcCCC---CcChhhc-----CcEEEEeHHHhCCCCc--eEEEEEecchhccccccccCceecCCCceee
Confidence            9999999999984221   1122211     2388999999877555  68877 7762211   011110100001112


Q ss_pred             hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC---ceEEEeecCCCChHHHHHHHH
Q 036024          153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN---APYVWAHFPGRKSWDVFAEIL  229 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~i~l~~~~~~~~~~~ll  229 (272)
                      ....+.+...+.++.+++. ...+++++.+++++++++++.+.|+..|+++..+.+   +.++++.+++.+..++...|.
T Consensus       258 ~~~~~~~~~~~~a~~~al~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~  336 (400)
T 3vax_A          258 LRPGTLPVPLIMGLAEAAK-IFEAEHAQWQVAAQDLRSRLLAGLASTSFQVNGDQDHVVPHILNLSFEDVDAEAFLVTLK  336 (400)
T ss_dssp             TSCSCCCHHHHHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHTTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHH
T ss_pred             eecCCCCHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHhhCCCCEEEeCCcccCCCCEEEEEeCCCCHHHHHHHHh
Confidence            2234456666666656655 223457889999999999999999944888887654   457788888766777777766


Q ss_pred             HhcCeEeeCCCCCCCCC-----------------CCeEEEEc-c--CCHHHHHHHHHHHHHhC
Q 036024          230 EKTHITTVPGSGFGPGG-----------------EEYIRISG-F--GHRESILEASRRLEALF  272 (272)
Q Consensus       230 ~~~gi~v~~g~~~~~~~-----------------~~~~R~s~-~--~~~~~i~~~l~~l~~~l  272 (272)
                        +||.+.+|..|.+..                 .+++|+++ .  .+++++++++++|++++
T Consensus       337 --~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~  397 (400)
T 3vax_A          337 --DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLK  397 (400)
T ss_dssp             --HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC------------------
T ss_pred             --cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHh
Confidence              599999987664311                 48999998 4  47899999999998764

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.92  E-value=3.7e-24  Score=183.69  Aligned_cols=246  Identities=15%  Similarity=0.063  Sum_probs=155.7

Q ss_pred             cccccccCccc-ch---HHhcccc-eeEEeecCCCCCcccCCCCCCCceE-EEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LE---DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDI-IFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~---~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~-i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. ..   ..++..| +++.+ .+.+ .+.- .  .+++++ +++++||||||.  +..++++|.++|+++
T Consensus        99 d~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-~d~~-~l~~-~--~~~~~~~v~~~~p~nptG~--~~~~l~~i~~l~~~~  171 (374)
T 2aeu_A           99 KKVIHYLPELPGHPSIERSCKIVNAKYFES-DKVG-EILN-K--IDKDTLVIITGSTMDLKVI--ELENFKKVINTAKNK  171 (374)
T ss_dssp             SEEEEECSSSSCCTHHHHHHHHTTCEEEEE-SCHH-HHHT-T--CCTTEEEEEECBCTTSCBC--CHHHHHHHHHHHHHH
T ss_pred             CEEEEecCCCCccHHHHHHHHHcCcEEEEe-CCHH-HHHh-c--CCCccEEEEEccCCCCCCC--CcccHHHHHHHHHHc
Confidence            56777766322 22   2556678 88777 3211 1111 1  357899 999999999997  778999999999999


Q ss_pred             CCEEEEcccCCccccC-CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++|+||+|..+..+ ....+...+    +..++++|+||.+  +|+|+||+++++++        ++.+.........
T Consensus       172 ~~~li~De~~~~~~~~~~~~~~~~~~----~~di~~~S~sK~l--~g~~~G~~~~~~~~--------~~~l~~~~~~~~~  237 (374)
T 2aeu_A          172 EAIVFVDDASGARVRLLFNQPPALKL----GADLVVTSTDKLM--EGPRGGLLAGKKEL--------VDKIYIEGTKFGL  237 (374)
T ss_dssp             TCCEEEECTTHHHHHHHTTCCCHHHH----TCSEEEEETTSSS--SSCSCEEEEEEHHH--------HHHHHHHHHTTTC
T ss_pred             CCEEEEECCcccccccccccCCcccc----CCcEEEecCcccc--cCcceEEEEECHHH--------HHHHHHhhccccC
Confidence            9999999999876421 101112222    1238899999986  45799999998877        5666555544444


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHH----HHHHHHHHHhC----CCeEec-CCCceEEEeecCCC----ChHH
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKEN----TKILIDTLASL----GIKVYG-GINAPYVWAHFPGR----KSWD  223 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~----~~~l~~~L~~~----g~~~~~-~~~~~~~~i~l~~~----~~~~  223 (272)
                      +++.+.+.++.+.+.....+..++..+..+..    .+.+.+.|...    |+.+.. +.+.++.|..++..    ++.+
T Consensus       238 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~  317 (374)
T 2aeu_A          238 EAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIE  317 (374)
T ss_dssp             BCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecccccccccchHH
Confidence            56778888888887754321222222222222    45556666553    566643 43344455444321    1122


Q ss_pred             HHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-C--HHHHHHHHHHHHHh
Q 036024          224 VFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-H--RESILEASRRLEAL  271 (272)
Q Consensus       224 ~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~--~~~i~~~l~~l~~~  271 (272)
                      ++.++++++||.+.||..| +.+.+++|++++. +  +.+++++.+.|+++
T Consensus       318 ~~~~ll~~~gV~v~~g~~~-~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~  367 (374)
T 2aeu_A          318 IGFNLLKNYGIITITVAGM-PGASKSLRIDLTSRDAERIDDNYIIKAIVES  367 (374)
T ss_dssp             HHHHHHHHHCEECSTTSSS-CSSCCSEEEETTSGGGGGSCHHHHHHHHHHH
T ss_pred             HHHHHHHhCCEEEecCCCC-CCCCCeEEEEcCCchHHHHHHHHHHHHHHHH
Confidence            5667787789999999877 4456789999854 2  22377777777664

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.91  E-value=1.2e-23  Score=178.87  Aligned_cols=243  Identities=11%  Similarity=0.084  Sum_probs=160.5

Q ss_pred             cccccccCccc-chHH--hccc--c-eeEEeecCCCCCcccC-CCC--C-C-------CceEEEEecCCCccccCCCHHH
Q 036024            4 DSSVIVGQAGD-LEDE--VGKY--C-NIEYLECGPGNNFFPD-LKG--T-S-------RTDIIFFCSPNNPTGHAATQNQ   66 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~--~~~~--g-~~~~~~~~~~~~~~~d-l~~--~-~-------~~~~i~~~~p~nptG~~~~~~~   66 (272)
                      |.|++..+++. ....  +...  | +++.+|.+ +..+.++ +++  . +       ++++|++++|+| ||.+++.++
T Consensus        84 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~  161 (356)
T 1v72_A           84 GNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDE  161 (356)
T ss_dssp             EEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHH
T ss_pred             CEEEEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHH
Confidence            55666665433 2223  4555  8 88888875 2233332 332  2 2       578999999987 999999999


Q ss_pred             HHHHHHHHHHcCCEEEEcccCCcccc--CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchH
Q 036024           67 LEQLVEFARNNGSIIIFDSAYAAYVT--DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVI  144 (272)
Q Consensus        67 l~~l~~~~~~~~~~vi~D~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~  144 (272)
                      +++|+++|++||+++|+|++|..+..  .+.......+....+  +++.|+||. |.| ...||+++++++        .
T Consensus       162 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~-g~~-~G~g~~~~~~~~--------~  229 (356)
T 1v72_A          162 IEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVD--ALSFGATKN-GVL-AAEAIVLFNTSL--------A  229 (356)
T ss_dssp             HHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCC--EEEECCGGG-TCS-SCEEEEESSGGG--------H
T ss_pred             HHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCC--EEEEecccC-CCc-CccEEEEECHHH--------H
Confidence            99999999999999999999975432  221111111111122  445689998 432 223488887776        3


Q ss_pred             HHHHhhhhh-cc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCCh
Q 036024          145 NDFNRIICT-CF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKS  221 (272)
Q Consensus       145 ~~~~~~~~~-~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~  221 (272)
                      +.+...... .. ...+...+.++.+.+.+.   ...+..++++++++++.+.|+++ |+++..+..++++|+.++    
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~----  302 (356)
T 1v72_A          230 TEMSYRRKRAGHLSSKMRFLSAQIDAYLTDD---LWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD----  302 (356)
T ss_dssp             HHHHHHHHHTTCCCSSTHHHHHHHHHHTSTT---HHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC----
T ss_pred             hhHHHHhhccCchhhhHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC----
Confidence            444333221 11 111223333344455432   22456778889999999999986 898877778899999886    


Q ss_pred             HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       222 ~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      .++...|.++ ||.+.||. |+   .+++|+++  ..+++++++++++|++++
T Consensus       303 ~~~~~~l~~~-gi~v~~g~-~~---~~~iRi~~~~~~~~~~i~~~~~~l~~~l  350 (356)
T 1v72_A          303 SAMIDALLKA-GFGFYHDR-WG---PNVVRFVTSFATTAEDVDHLLNQVRLAA  350 (356)
T ss_dssp             HHHHHHHHHT-TCBCBCSS-SS---TTEEEEECCTTCCHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhc-CeEEeccc-cC---CCeEEEEecCCCCHHHHHHHHHHHHHHH
Confidence            2666776554 99999887 54   67999996  358999999999998864

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.91  E-value=4.5e-24  Score=185.89  Aligned_cols=205  Identities=14%  Similarity=0.152  Sum_probs=148.4

Q ss_pred             CCceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++++|++++++|++|. +++.+++++|.++|+++|+++|+||+|.++...+...........++ ++   |+||.+| +
T Consensus       200 ~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~d-ii---t~sK~l~-~  274 (420)
T 2pb2_A          200 DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPD-IL---TSAKALG-G  274 (420)
T ss_dssp             TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCS-EE---EECGGGG-T
T ss_pred             cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCC-eE---Eeccccc-C
Confidence            57889998888888884 68999999999999999999999999987665543322222222233 22   7899999 8


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--C
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--G  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g  200 (272)
                      |+|+||+++++++.        +.+.......+++.+++++.++.+.++....   ++..++++++++++.+.|+++  +
T Consensus       275 G~~iG~~~~~~~l~--------~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~  343 (420)
T 2pb2_A          275 GFPVSAMLTTQEIA--------SAFHVGSHGSTYGGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQ  343 (420)
T ss_dssp             TSCCEEEEECHHHH--------TTCC----CCEECCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEEhHHHH--------HhhcCCCcCcccCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999988763        2222222333445788888888888764322   456778888888888888764  2


Q ss_pred             C---eEecCCCceEEEeecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          201 I---KVYGGINAPYVWAHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       201 ~---~~~~~~~~~~~~i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                      +   ....+ .|.++++.++..   +..++...|++ +||.+.|+.      ++++|++  +..+++++++++++|++++
T Consensus       344 ~~~~~~~~~-~g~~~~v~~~~~~~~~~~~l~~~l~~-~Gi~v~~~~------~~~iRl~~~~~~t~eei~~~~~~l~~~l  415 (420)
T 2pb2_A          344 FDIFSDIRG-MGLLIGAELKPKYKGRARDFLYAGAE-AGVMVLNAG------ADVMRFAPSLVVEEADIHEGMQRFAQAV  415 (420)
T ss_dssp             HCCEEEEEE-ETTEEEEEECGGGTTCHHHHHHHHHH-TTEECEESS------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEe-cceEEEEEECCCchHHHHHHHHHHHH-CCCEEEeCC------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence            2   22333 477888888742   45667777766 599999864      5789999  4579999999999998763

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.91  E-value=3e-23  Score=183.35  Aligned_cols=254  Identities=16%  Similarity=0.140  Sum_probs=176.6

Q ss_pred             ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      .|++..+.+. +...++..| +++.+|.+++  +.+|++.     .+++++|++++| ||||.+.  +++++|+++|+++
T Consensus       158 ~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~--~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~  232 (474)
T 1wyu_B          158 VVLVPDSAHGSNPATASMAGYQVREIPSGPE--GEVDLEALKRELGPHVAALMLTNP-NTLGLFE--RRILEISRLCKEA  232 (474)
T ss_dssp             EEEEETTSCTHHHHHHHHTTCEEEEECBCTT--SSBCHHHHHHHCSTTEEEEEECSS-CTTSCCC--TTHHHHHHHHHHH
T ss_pred             EEEEeCCcChhhHHHHHHCCCEEEEecCCCC--CCcCHHHHHHhhCCCceEEEEECC-CCCcccC--CCHHHHHHHHHHc
Confidence            5677666555 777778888 9999998754  4455333     267899999998 5899873  3599999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC-c---cceeEEEecccccccCCcchHH----HH--
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT-G---VRLGWTVVPEELLFSSGFPVIN----DF--  147 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~-g---~r~G~~~~~~~~~~~~~~~~~~----~~--  147 (272)
                      |+++|+|++|.....+.  .....+    +..+++.|+||.++.| |   .|+||++++++++.....++..    .+  
T Consensus       233 g~~li~Dea~~~~~~g~--~~~~~~----g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~  306 (474)
T 1wyu_B          233 GVQLYYDGANLNAIMGW--ARPGDM----GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYL  306 (474)
T ss_dssp             TCEEEEEGGGGGGTTTT--CCHHHH----TCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEE
T ss_pred             CCEEEEeCchhhhhccC--CCcccC----CCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEe
Confidence            99999999998655431  222233    2338889999999766 4   5999999998874321100000    00  


Q ss_pred             -----HhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCce-EEEeecC-CCC
Q 036024          148 -----NRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP-YVWAHFP-GRK  220 (272)
Q Consensus       148 -----~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~~i~l~-~~~  220 (272)
                           .........+.+..++.++...+...+.++++++.+++.++++++.+.|+++|+++..+.... .+++.++ +.+
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~  386 (474)
T 1wyu_B          307 DFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQPPEGFR  386 (474)
T ss_dssp             ECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSCSSCCSCEEEBCSTTCC
T ss_pred             cccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcEecCCCCcceEEEEEcCCCCC
Confidence                 000000112356677777787777555677888899999999999999998888774332222 1566664 446


Q ss_pred             hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024          221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG--HRESILEASRRLEAL  271 (272)
Q Consensus       221 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~--~~~~i~~~l~~l~~~  271 (272)
                      ..++..+|+++ ||.+ |+..|.....+++|+++..  +++++++++++|+++
T Consensus       387 ~~~l~~~L~~~-Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~  437 (474)
T 1wyu_B          387 ALDLAKGLLEL-GFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGAL  437 (474)
T ss_dssp             HHHHHHHHHHT-TCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHC-Cccc-cccccccccCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            67777887776 9985 6666643346789999855  899999999999875

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.91  E-value=5.5e-23  Score=177.71  Aligned_cols=225  Identities=12%  Similarity=0.042  Sum_probs=159.5

Q ss_pred             Hhccc--c-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCC
Q 036024           18 EVGKY--C-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG   94 (272)
Q Consensus        18 ~~~~~--g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~   94 (272)
                      .+...  | +++.++.+ + ++..+.+..+++++|++++|+||||.+++.+++.++      +|+++|+|++|..+... 
T Consensus       137 ~~~~~~~g~~~~~v~~~-~-g~~~~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~~~~-  207 (398)
T 2fyf_A          137 AVSKNPFVGEPIIITSD-P-GSAPEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGS------DDALVVIDATSGAGGLP-  207 (398)
T ss_dssp             HHHHCTTSCCCEEEECC-T-TCCCCCCCCTTCSEEEEESEETTTTEECCCCCCTTC------C-CEEEEECTTTTTTSC-
T ss_pred             HHHHhCCCCceEEEecC-C-CCCCCccccCCCCEEEEeCcCCCcceecchHHhhhh------cCCeEEEEeccccCCcc-
Confidence            34444  7 88888887 3 444444334789999999999999999995555443      89999999999864321 


Q ss_pred             CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh-----------------h----hh
Q 036024           95 CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI-----------------I----CT  153 (272)
Q Consensus        95 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~-----------------~----~~  153 (272)
                        ..+.      +..++++|+||.+|.+| ++||++++++.+        +.+...                 .    ..
T Consensus       208 --~~~~------~~di~~~s~sK~~~~~g-g~g~l~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (398)
T 2fyf_A          208 --VDIA------ETDAYYFAPQKNFASDG-GLWLAIMSPAAL--------SRIEAIAATGRWVPDFLSLPIAVENSLKNQ  270 (398)
T ss_dssp             --CCGG------GCSEEEECTTSTTCSCS-SEEEEEECHHHH--------HHHHHHHHTTCCCCGGGCHHHHHHHHTTTC
T ss_pred             --cCcc------cCcEEEEecCcccCCCC-ceEEEEECHHHH--------HHhhcccccCCCCCcEEehHHHhhhcccCC
Confidence              1221      12388999999999665 699999988773        222110                 0    12


Q ss_pred             ccCCcchHHHHHHHHhcccccHHH-HHHHHHHHHHHHHHHHHHHHhC-CCeEec--C--CCceEEEeecC-CCChHHHHH
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEA-VHSVVDYYKENTKILIDTLASL-GIKVYG--G--INAPYVWAHFP-GRKSWDVFA  226 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~--~~~~~~~i~l~-~~~~~~~~~  226 (272)
                      ...+++...+.++.++++...... +++++++++++++++.+.|+++ |+++..  +  ..+.++|+.++ +.+..++..
T Consensus       271 ~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  350 (398)
T 2fyf_A          271 TYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVDAGTVAK  350 (398)
T ss_dssp             CSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTSCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCCCHHHHHH
Confidence            234466666766666665322222 6888999999999999999998 888874  3  23448999986 456677777


Q ss_pred             HHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          227 EILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      .|.++ ||.+.+|.  ...+.+++|+++.  .+++|+++++++|+++
T Consensus       351 ~L~~~-gI~v~~g~--~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~  394 (398)
T 2fyf_A          351 ILRAN-GIVDTEPY--RKLGRNQLRVAMFPAVEPDDVSALTECVDWV  394 (398)
T ss_dssp             HHHHT-TCBCCSCC--TTTCSSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHC-CcEEecCc--ccCCCCEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            77766 99999873  2233578999985  5899999999999875

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.91  E-value=1.3e-23  Score=179.21  Aligned_cols=244  Identities=11%  Similarity=0.070  Sum_probs=163.8

Q ss_pred             ccccccc-C-ccc-chHHhcccceeEEeecCC--CCCcccCCCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVG-Q-AGD-LEDEVGKYCNIEYLECGP--GNNFFPDLKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~-~-~~~-~~~~~~~~g~~~~~~~~~--~~~~~~dl~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++.. + +.. +...++..|+++.++.+.  +.+..+|+++   .+++|++++++|+||||.+++  ++++|     
T Consensus        93 d~vl~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~i~~~t~~v~~~~~~n~tG~~~~--~l~~i-----  165 (362)
T 2c0r_A           93 QTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFK--AFPDT-----  165 (362)
T ss_dssp             CEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEEEEEEESEETTTTEECS--SCCCC-----
T ss_pred             CeEEEEecCcHhHHHHHHHHHhCCeEEEecccccccccCCCHHHcccCCCcCEEEEeCCcCccceecc--ccccc-----
Confidence            5555543 2 322 234555556778888763  2344445332   368999999999999999754  35554     


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcc--hHHHHHh--hh
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFP--VINDFNR--II  151 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~--~~~~~~~--~~  151 (272)
                       +|+++++|++|..+..   +..+...      .+++.|+||.+|++|  +||++++++.+....+.  ..-.+..  ..
T Consensus       166 -~~~~vivD~a~~~~~~---~~~~~~~------d~~~~s~~K~~g~~G--~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~  233 (362)
T 2c0r_A          166 -GSVPLIGDMSSDILSR---PFDLNQF------GLVYAGAQKNLGPSG--VTVVIVREDLVAESPKHLPTMLRYDTYVKN  233 (362)
T ss_dssp             -TTSCEEEECTTTTTSS---CCCGGGC------SEEEEETTTTTCCSS--CEEEEEEGGGSSSCCTTSCGGGCHHHHHHT
T ss_pred             -CCCEEEEEChhhccCC---ccchhHC------cEEEEeccccccCcC--cEEEEEcHHHHhhccccCchHHhHHHHhhc
Confidence             8999999999986432   2222221      278889999999778  89999998875332110  0000000  01


Q ss_pred             hhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCC-C-eEecC---CCceEEEeecCC-CChHHH
Q 036024          152 CTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLG-I-KVYGG---INAPYVWAHFPG-RKSWDV  224 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~---~~~~~~~i~l~~-~~~~~~  224 (272)
                      .....+++...+.++.++++..... ++++++++++++++++.+.|+++| + ++..+   ..+.++++.++. .+..++
T Consensus       234 ~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (362)
T 2c0r_A          234 NSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEELEKEF  313 (362)
T ss_dssp             TTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHHHHHHH
T ss_pred             cCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCcchHHHH
Confidence            1233457778888888888642222 578899999999999999999987 6 76432   245668888873 344566


Q ss_pred             HHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          225 FAEILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       225 ~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      ...| ++.||.+.+|..+    .+++|+|++  +++++++++++.|+++
T Consensus       314 ~~~L-~~~gi~~~~g~~~----~~~iRis~~~~~~~e~i~~l~~~l~~~  357 (362)
T 2c0r_A          314 VKAS-EQEGFVGLKGHRS----VGGLRASIYNAVPYESCEALVQFMEHF  357 (362)
T ss_dssp             HHHH-HHTTEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHH-HHCCCeeccCCCC----CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            6665 5559999888765    357999985  4899999999999875

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.91  E-value=1.1e-23  Score=181.87  Aligned_cols=206  Identities=16%  Similarity=0.152  Sum_probs=148.5

Q ss_pred             CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++++++||||.++ +.+.+++|+++|+++|+++|+||+|.++...+...++.......+ ++   |+||.++ +
T Consensus       184 ~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d-~~---s~sK~~~-~  258 (395)
T 1vef_A          184 EETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPD-IL---TLAKALG-G  258 (395)
T ss_dssp             TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS-EE---EECGGGG-T
T ss_pred             cCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCC-EE---EEccccc-C
Confidence            5788888777789999765 688899999999999999999999997544443222222221223 22   8899998 5


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK  202 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~  202 (272)
                      |+|+||+++++++        ++.+.........+.+.+.+.++.++++....   ++..++++++++++.+.|++++..
T Consensus       259 g~~~G~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~  327 (395)
T 1vef_A          259 GVPLGVAVMREEV--------ARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSP  327 (395)
T ss_dssp             TSSCEEEEEEHHH--------HHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCT
T ss_pred             CCceEEEEehHHH--------HhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcC
Confidence            9999999998876        33332212233445778888877777763221   456788899999999999987542


Q ss_pred             E--ecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          203 V--YGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       203 ~--~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      +  ..+..++++|+.++. ...++...|++++||.+.|+.      .+++|+++  ..+++++++++++|++++
T Consensus       328 ~~~~~~~~g~~~~~~~~~-~~~~l~~~l~~~~gi~v~~~~------~~~iRi~~~~~~~~~~i~~~~~~l~~~l  394 (395)
T 1vef_A          328 KIREVRGMGLMVGLELKE-KAAPYIARLEKEHRVLALQAG------PTVIRFLPPLVIEKEDLERVVEAVRAVL  394 (395)
T ss_dssp             TEEEEEEETTEEEEEESS-CSHHHHHHHHHHHCEECEESS------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEEEEEEEEEEcC-hHHHHHHHHHHHCCeEEecCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            1  122356889999875 366777777735599999862      67999985  468999999999998763

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.90  E-value=1.2e-23  Score=178.89  Aligned_cols=243  Identities=11%  Similarity=0.105  Sum_probs=163.7

Q ss_pred             cccccccCccc-chH--Hhcccc-eeEEeecCCCCCcccCCCCC-----C-------CceEEEEecCCCccccCCCHHHH
Q 036024            4 DSSVIVGQAGD-LED--EVGKYC-NIEYLECGPGNNFFPDLKGT-----S-------RTDIIFFCSPNNPTGHAATQNQL   67 (272)
Q Consensus         4 d~~~~~~~~~~-~~~--~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~-------~~~~i~~~~p~nptG~~~~~~~l   67 (272)
                      |.|++..+.+. +..  .++..| +++.+|.+   ++.+|++.+     +       +++++++++| ||||.+++.+++
T Consensus        91 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l  166 (359)
T 1svv_A           91 EAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQEL  166 (359)
T ss_dssp             EEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHH
T ss_pred             CEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHH
Confidence            55666666555 444  366778 99999985   344553331     2       3899999999 799999999999


Q ss_pred             HHHHHHHHHcCCEEEEcccCCccccCCCCCCccc--cCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHH
Q 036024           68 EQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYE--IPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN  145 (272)
Q Consensus        68 ~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~  145 (272)
                      ++|+++|+++|+++|+||+|.++..+..+.....  +....+  ++..|.+|..+ + ...|+++++++..        +
T Consensus       167 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d--~~~~s~~K~g~-~-~~~g~l~~~~~~~--------~  234 (359)
T 1svv_A          167 EDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTD--MFYIGATKAGG-M-FGEALIILNDALK--------P  234 (359)
T ss_dssp             HHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCS--EEEEECTTTTC-S-SCEEEEECSGGGC--------T
T ss_pred             HHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCC--EEEEecccCCC-C-CceEEEEEcccHH--------H
Confidence            9999999999999999999965433321111111  000112  77889999744 3 4479999888773        2


Q ss_pred             HHHhhh--hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHH
Q 036024          146 DFNRII--CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWD  223 (272)
Q Consensus       146 ~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~  223 (272)
                      .+....  .......+.....++.+++.+   ...++.+++++++++++.+.|+..|+++..+.+++++|+.++    .+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~----~~  307 (359)
T 1svv_A          235 NARHLIKQRGALMAKGWLLGIQFEVLMKD---NLFFELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFPILE----NT  307 (359)
T ss_dssp             THHHHHHHTTCCCTTTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEECBEEE----HH
T ss_pred             HHHHHHhcCCcccccchhhHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHhccCCeEEccCCccceEEEEcC----HH
Confidence            332221  111111122222333444543   234778899999999999999555888887778899998875    46


Q ss_pred             HHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          224 VFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       224 ~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      +...|++++||.+.+..   +.+.+++|+++  ..+++++++++++|++++
T Consensus       308 ~~~~l~~~~gi~v~~~~---~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~  355 (359)
T 1svv_A          308 MIAELNNDFDMYTVEPL---KDGTCIMRLCTSWATEEKECHRFVEVLKRLV  355 (359)
T ss_dssp             HHHHHTTTEECEEEEEE---TTTEEEEEEECCTTCCHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHhcCEEEEecc---cCCCceEEEEccCcCCHHHHHHHHHHHHHHH
Confidence            77777777799983211   23467899985  468999999999998764

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=99.90  E-value=7.6e-23  Score=178.58  Aligned_cols=209  Identities=14%  Similarity=0.121  Sum_probs=137.4

Q ss_pred             ceEEEEecCCC-cccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCcccc-CCCCCceEEEecCccccCCC
Q 036024           46 TDIIFFCSPNN-PTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI-PGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        46 ~~~i~~~~p~n-ptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++++++.+|| ++|. +++++.+++|.++|++||+++|+||+|.++...+........ ...++    +.++||.++ +
T Consensus       191 ~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~d----i~t~sK~l~-~  265 (430)
T 3i4j_A          191 VAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPD----IAVLGKGLA-A  265 (430)
T ss_dssp             EEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCS----EEEECGGGT-T
T ss_pred             EEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCc----EEEEccccc-C
Confidence            34444444477 8887 667888999999999999999999999987666543333333 22222    236899998 6


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHhh----hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNRI----ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA  197 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~  197 (272)
                      | +|+||++++++.        ++.+...    ....+++.+++++.|+.++++....   ++..++++++.+++++.|.
T Consensus       266 G~~r~G~~~~~~~i--------~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~l~  334 (430)
T 3i4j_A          266 GYAPLAGLLAAPQV--------YETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVER---EDLTGAAKERGAQLLAGLQ  334 (430)
T ss_dssp             TSSCCEEEEECHHH--------HHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHH
T ss_pred             CccccEEEEECHHH--------HHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHH
Confidence            9 999999998887        5666653    3445556889999988888873222   2334444455555554444


Q ss_pred             h----C-CCeEecCCCceEEEeecCCCC----------hHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHH
Q 036024          198 S----L-GIKVYGGINAPYVWAHFPGRK----------SWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRE  259 (272)
Q Consensus       198 ~----~-g~~~~~~~~~~~~~i~l~~~~----------~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~  259 (272)
                      +    + ++....+ .|.++++.+.+..          ..++...++++ ||.+.|+..+. ..+.+++|+++.  .+++
T Consensus       335 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e  412 (430)
T 3i4j_A          335 ALQARFPQMMQVRG-TGLLLGVVLGDLATGQAFETPGIASRIGAAALKR-GLITYPGSGAEPNGRGDHLLLGPPLSITAA  412 (430)
T ss_dssp             HHHHHCTTEEEEEE-ETTEEEEEEC------------CHHHHHHHHHHT-TEECC-----------CEEEECCCTTCCHH
T ss_pred             HHHHhCCCeEEEEE-EEEEEEEEeccccccCCCccHHHHHHHHHHHHhC-CCEEEecccccCCCCCCEEEEECCCCCCHH
Confidence            3    3 4555554 4678888875311          14566666655 99999984332 334678999964  6899


Q ss_pred             HHHHHHHHHHHhC
Q 036024          260 SILEASRRLEALF  272 (272)
Q Consensus       260 ~i~~~l~~l~~~l  272 (272)
                      ++++++++|++++
T Consensus       413 ~i~~~l~~l~~~l  425 (430)
T 3i4j_A          413 EVDGLLALLAGAL  425 (430)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998763

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.90  E-value=1.8e-23  Score=178.16  Aligned_cols=230  Identities=12%  Similarity=0.063  Sum_probs=154.2

Q ss_pred             HHhcccceeEEeecCCCCCc-ccC-CCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024           17 DEVGKYCNIEYLECGPGNNF-FPD-LKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV   91 (272)
Q Consensus        17 ~~~~~~g~~~~~~~~~~~~~-~~d-l~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~   91 (272)
                      ..++..|+++.++++++.++ .++ +++   .+++|++++++|+||||.+++  ++   .   +++|+++|+|++|..+.
T Consensus       108 ~~~~~~g~~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~--~i---~---~~~~~~li~D~a~~~~~  179 (360)
T 1w23_A          108 KEAKLLGETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ--NF---P---EINHAPLIADMSSDILS  179 (360)
T ss_dssp             HHHHTTSEEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECS--SC---C---CCCSSCEEEECTTTTTS
T ss_pred             HHHHHhCCeEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCcceecc--cc---c---ccCCceEEEechhhcCC
Confidence            34455567888888753342 333 433   267899999999999999987  22   2   27999999999998643


Q ss_pred             cCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh-----hhhccCCcchHHHHHH
Q 036024           92 TDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI-----ICTCFNGASNIAQAGG  166 (272)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~  166 (272)
                      .   +.++..+    +  ++++|+||.+|.+|  +||++++++.+... ..........     ......+++...+.++
T Consensus       180 ~---~~~~~~~----d--i~~~s~sK~~~~~G--~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (360)
T 1w23_A          180 R---PLKVNQF----G--MIYAGAQKNLGPSG--VTVVIVKKDLLNTK-VEQVPTMLQYATHIKSDSLYNTPPTFSIYML  247 (360)
T ss_dssp             S---CCCGGGC----S--EEEEETTTTTSCTT--CEEEEEEHHHHCSC-CTTCCGGGCHHHHHHTTTCSSCCCHHHHHHH
T ss_pred             C---CcCcccC----C--EEEEEcccccCCCC--cEEEEEcHHHHhhc-ccCCcchhhhhhhhhccCCCCCCCHHHHHHH
Confidence            2   1223222    2  88999999999666  89999998775322 1111000000     1122234566666666


Q ss_pred             HHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCC-C-eEe-cC--CCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCC
Q 036024          167 LACLSSEGLE-AVHSVVDYYKENTKILIDTLASLG-I-KVY-GG--INAPYVWAHFPGR-KSWDVFAEILEKTHITTVPG  239 (272)
Q Consensus       167 ~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~-~~--~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g  239 (272)
                      .+++...... ++++++++++++++++.+.|++++ + ... .+  .+++++|+.+++. +..++..+| +++||.+.+|
T Consensus       248 ~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~~~~~  326 (360)
T 1w23_A          248 RNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKA-KEQGFVGLNG  326 (360)
T ss_dssp             HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHHHHHHHHHHH-HHTTEESCBC
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCCccHHHHHHHH-HHCCeeeecC
Confidence            6666532222 568899999999999999999885 5 543 12  2455899998742 234555554 4569999988


Q ss_pred             CCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          240 SGFGPGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       240 ~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      ..+    .+++|+++.  .+++++++++++|+++
T Consensus       327 ~~~----~~~iRis~~~~~~~~~i~~~~~~l~~~  356 (360)
T 1w23_A          327 HRS----VGGCRASIYNAVPIDACIALRELMIQF  356 (360)
T ss_dssp             CTT----TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCC----CCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            754    578999985  5899999999999875

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.90  E-value=6.3e-23  Score=177.39  Aligned_cols=240  Identities=13%  Similarity=0.144  Sum_probs=163.3

Q ss_pred             cccccccCccc-chHHh----cccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEV----GKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~----~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. +...+    +..| +++.++.+.-..+.-.+  .++++++++++|+||||.+++   +++|+++|+++
T Consensus       104 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~  178 (398)
T 2rfv_A          104 DHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAM--RPETKVVYIETPANPTLSLVD---IETVAGIAHQQ  178 (398)
T ss_dssp             CEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHC--CTTEEEEEEESSBTTTTBCCC---HHHHHHHHHHT
T ss_pred             CEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhc--CCCCeEEEEECCCCCCCcccC---HHHHHHHHHHc
Confidence            55666666554 44444    6678 88888875111111002  257899999999999999997   99999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHH-HHHhhhhhc-
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVIN-DFNRIICTC-  154 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~-~~~~~~~~~-  154 (272)
                      |+++|+|++|..+.+..   ++ .+    +..+++.|+||.++.+|.|+ ||++++++.        ++ .+....... 
T Consensus       179 ~~~li~De~~~~~~~~~---~~-~~----~~di~~~s~sK~~~~~g~~~~G~~~~~~~~--------~~~~~~~~~~~~~  242 (398)
T 2rfv_A          179 GALLVVDNTFMSPYCQQ---PL-QL----GADIVVHSVTKYINGHGDVIGGIIVGKQEF--------IDQARFVGLKDIT  242 (398)
T ss_dssp             TCEEEEECTTTCTTTCC---GG-GG----TCSEEEEETTTTTTCSSCCCCEEEEECHHH--------HHHHHHTHHHHTT
T ss_pred             CCEEEEECCCcccccCC---ch-hh----CCcEEEEeCcccccCCCCceEEEEEECHHH--------HHHHHHHHHHhCC
Confidence            99999999999755431   11 22    24599999999998899998 999999877        33 444444443 


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC---------------CeEecC---CCceEEEeec
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG---------------IKVYGG---INAPYVWAHF  216 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------------~~~~~~---~~~~~~~i~l  216 (272)
                      ..+.+.+.+.++.+.++. .    ....++..++.+.+.+.|.+.+               +++..+   ..+.++++.+
T Consensus       243 ~~~~~~~~~~~~~~~l~~-~----~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~  317 (398)
T 2rfv_A          243 GGCMSPFNAWLTLRGVKT-L----GIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEI  317 (398)
T ss_dssp             CCCCCHHHHHHHHHHHTT-H----HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEE
T ss_pred             CCCCCHHHHHHHHhhhhh-H----HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEE
Confidence            445778888888877763 2    3344556677777777777642               222222   2466777788


Q ss_pred             CCCChHHHHHHHHHhc---CeEeeCCCCCC-------------C--------CCCCeEEEEcc--CCHHHHHHHHHHHHH
Q 036024          217 PGRKSWDVFAEILEKT---HITTVPGSGFG-------------P--------GGEEYIRISGF--GHRESILEASRRLEA  270 (272)
Q Consensus       217 ~~~~~~~~~~~ll~~~---gi~v~~g~~~~-------------~--------~~~~~~R~s~~--~~~~~i~~~l~~l~~  270 (272)
                      ++.  .+....++++.   |+.+.+|+.|+             +        ...+.+|+|+.  .++++++++.+.|++
T Consensus       318 ~~~--~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~  395 (398)
T 2rfv_A          318 AGG--LEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK  395 (398)
T ss_dssp             TTH--HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             cCC--HHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence            742  22334455544   88888886642             0        11689999974  367889999998876


Q ss_pred             h
Q 036024          271 L  271 (272)
Q Consensus       271 ~  271 (272)
                      +
T Consensus       396 ~  396 (398)
T 2rfv_A          396 A  396 (398)
T ss_dssp             H
T ss_pred             h
Confidence            4

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.90  E-value=2e-23  Score=177.02  Aligned_cols=238  Identities=17%  Similarity=0.152  Sum_probs=152.8

Q ss_pred             cccccccCccc--ch--HHhcccc-eeEEeecCCCCCcccCCCC----C-------CCceEEEEecCCCcc-ccCCCHHH
Q 036024            4 DSSVIVGQAGD--LE--DEVGKYC-NIEYLECGPGNNFFPDLKG----T-------SRTDIIFFCSPNNPT-GHAATQNQ   66 (272)
Q Consensus         4 d~~~~~~~~~~--~~--~~~~~~g-~~~~~~~~~~~~~~~dl~~----~-------~~~~~i~~~~p~npt-G~~~~~~~   66 (272)
                      |.|++..|++.  |.  ..+...| +++++ .++  ++.+|++.    .       ++++++++++||||| |.+++.++
T Consensus        78 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~  154 (347)
T 1jg8_A           78 DEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLEN  154 (347)
T ss_dssp             CEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHH
T ss_pred             CEEEEcCcchhhhccccchhhccCeEEEEe-cCC--CCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHH
Confidence            66777777643  32  1345567 88777 432  33344222    1       268999999999999 99999999


Q ss_pred             HHHHHHHHHHcCCEEEEcccCCccc--cCCCCCCccccCCCCCceEEEecCccccCCCccceeE-EEecccccccCCcch
Q 036024           67 LEQLVEFARNNGSIIIFDSAYAAYV--TDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGW-TVVPEELLFSSGFPV  143 (272)
Q Consensus        67 l~~l~~~~~~~~~~vi~D~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~-~~~~~~~~~~~~~~~  143 (272)
                      +++|+++|+++|+++++|++|....  +.+  .+...+....+  .++.|+||.+|.+   +|+ ++.++++        
T Consensus       155 l~~i~~~a~~~~~~li~D~a~~~~~~~~~~--~~~~~~~~~~d--~~~~s~sK~l~~~---~G~~~~~~~~~--------  219 (347)
T 1jg8_A          155 IKEICTIAKEHGINVHIDGARIFNASIASG--VPVKEYAGYAD--SVMFCLSKGLCAP---VGSVVVGDRDF--------  219 (347)
T ss_dssp             HHHHHHHHHHHTCEEEEEETTHHHHHHHHC--CCHHHHHHTCS--EEEEESSSTTCCS---SCEEEEECHHH--------
T ss_pred             HHHHHHHHHHCCCEEEeehhhhhcchhhcC--CChHHhccccc--EEEEecccccCCC---ceEEEEcCHHH--------
Confidence            9999999999999999999875321  112  12222211223  3345899999743   574 5556655        


Q ss_pred             HHHHHhhhhhccC--CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEe-cCCCceEEEeecC--C
Q 036024          144 INDFNRIICTCFN--GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY-GGINAPYVWAHFP--G  218 (272)
Q Consensus       144 ~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~i~l~--~  218 (272)
                      ++.+.........  ..+...+.++...+.... +   .+ ++..++++.+.+.|+++|+++. .+..+.++|+.++  +
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~---~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
T 1jg8_A          220 IERARKARKMLGGGMRQAGVLAAAGIIALTKMV-D---RL-KEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLK  294 (347)
T ss_dssp             HHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS-T---TH-HHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSS
T ss_pred             HHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH-H---HH-HHHHHHHHHHHHHHHhcCceeccCCCcceEEEEEccccc
Confidence            3444333322221  123344444444444211 1   12 2233567888888887777653 3456778999997  3


Q ss_pred             CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       219 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      .+..++...|.++ ||.+.++.      .+++|+++  ..+++++++++++|+++
T Consensus       295 ~~~~~~~~~l~~~-gi~v~~~~------~~~iRl~~~~~~~~e~i~~~~~~l~~~  342 (347)
T 1jg8_A          295 VNAHGFIEALRNS-GVLANAVS------DTEIRLVTHKDVSRNDIEEALNIFEKL  342 (347)
T ss_dssp             SCHHHHHHHHHHH-TEECEEEE------TTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHC-CCEEecCC------CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4567777777654 99998753      46899996  34899999999999875

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.90  E-value=1e-22  Score=181.71  Aligned_cols=254  Identities=12%  Similarity=0.114  Sum_probs=172.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...++..| +++.+|++++  +.+|++.     .+++++|++++|+||||.+.+   +++|.++|++
T Consensus       193 d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~~--~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~  267 (514)
T 3mad_A          193 PEAVVPVSAHAAFDKAAQYFGIKLVRTPLDAD--YRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAE  267 (514)
T ss_dssp             CEEEEETTSCTHHHHHHHHHTCEEEEECBCTT--SCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHH
T ss_pred             CeEEEeCccchHHHHHHHHcCCeeEEeeeCCC--CCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHH
Confidence            67777766655 888888889 9999999764  4445332     267899999999999999988   8999999999


Q ss_pred             cCCEEEEcccCCccccC-----CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH--h
Q 036024           77 NGSIIIFDSAYAAYVTD-----GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN--R  149 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~--~  149 (272)
                      +|+++|+|++|+++...     +.+.+.... ...+..+++.|++|.++ +|.++|+++++++............+.  .
T Consensus       268 ~~i~livDea~~~~~~~~~~~~g~~~~~~~~-~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  345 (514)
T 3mad_A          268 HGIGCHVDACLGGFILPWAERLGYPVPPFDF-RLEGVTSVSADTHKYGY-GAKGTSVILYRRPDLLHYQYFIAADWPGGL  345 (514)
T ss_dssp             HTCEEEEECTTTTTTHHHHHHTTCCCCCCST-TSTTCCEEEECTTTTTC-CCSSCEEEEESSHHHHTTTCEEESSCTTCS
T ss_pred             hCCeEEEecccccccchhHHhcCCCCCcccc-cCCCCcEEEECchhccC-CCCCeEEEEEeCHHHhccccccccccCCCc
Confidence            99999999999976541     111111111 11233588899999875 677899999988763211100000000  0


Q ss_pred             hhh-hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHH
Q 036024          150 IIC-TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAE  227 (272)
Q Consensus       150 ~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~  227 (272)
                      ... ....+.+.....+....+......++++..++.+++++++.+.|+++ |+++..+. ..++++..++.+..++...
T Consensus       346 ~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~~~~~~l~~~  424 (514)
T 3mad_A          346 YFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASDELNIYQVMEE  424 (514)
T ss_dssp             EEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC-SSEEEEECSSSCHHHHHHH
T ss_pred             ccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC-eEEEEEeCCCCCHHHHHHH
Confidence            000 01112222222333333332334566888999999999999999997 88888765 4477777776667777777


Q ss_pred             HHHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          228 ILEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                      |.++ ||.+ +|..|    ++.+|+++.   .+++++++++++|+++
T Consensus       425 L~~~-Gi~v-~g~~~----~~~~Ri~~~~~~~~~e~i~~~l~~L~~~  465 (514)
T 3mad_A          425 MAGR-GWRL-NGLHR----PPAFHVALTLRHTEPGVVDRFLADLQDA  465 (514)
T ss_dssp             HHTT-TCBC-EEETT----TTEEEEECCGGGGSTTHHHHHHHHHHHH
T ss_pred             HHhc-CCEe-ccCCC----CCeEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            7766 9988 55443    467999964   3578999999999875

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.90  E-value=1.7e-23  Score=182.87  Aligned_cols=207  Identities=14%  Similarity=0.042  Sum_probs=143.7

Q ss_pred             CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++++++++..+||||. .++++.+++|+++|++||+++|+||+|.++...+...........++    +.|+||.+| +|
T Consensus       203 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~d----i~s~sK~~~-~G  277 (433)
T 1zod_A          203 NLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPD----ILTLSKTLG-AG  277 (433)
T ss_dssp             CEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS----EEEECHHHH-TT
T ss_pred             CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCC----EEEeccccc-CC
Confidence            4455554433688995 57888999999999999999999999998755443222222221222    348999999 59


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhh--hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRII--CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--  199 (272)
                      +|+||++++++.        ++.+....  ...+.+.+++++.++.++++....   ++..++++++++++++.|+++  
T Consensus       278 ~~ig~~~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~l~~  346 (433)
T 1zod_A          278 LPLAAIVTSAAI--------EERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDRLRRGLLDLME  346 (433)
T ss_dssp             SSCEEEEECHHH--------HHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeeEEEEhHHH--------HHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999877        55554422  224455788888888888763211   234566777777777777653  


Q ss_pred             --C-CeEecCCCceEEEeecCC---------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHH
Q 036024          200 --G-IKVYGGINAPYVWAHFPG---------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEAS  265 (272)
Q Consensus       200 --g-~~~~~~~~~~~~~i~l~~---------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l  265 (272)
                        + +....+ .|.++|+.++.         ....++...+++ +||.+.||..|+  .++++|+++  ..+++++++++
T Consensus       347 ~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~--~~~~lRi~~~~~~t~~~i~~~l  422 (433)
T 1zod_A          347 RFDCIGDVRG-RGLLLGVEIVKDRRTKEPADGLGAKITRECMN-LGLSMNIVQLPG--MGGVFRIAPPLTVSEDEIDLGL  422 (433)
T ss_dssp             HCTTEEEEEE-ETTEEEEEEEEETTTTEECTTHHHHHHHHHHH-TTEECCEECCTT--SCCEEEECCCTTCCHHHHHHHH
T ss_pred             hCCCeEEEEE-EEEEEEEEEecCccccCCChHHHHHHHHHHHH-CCCeEeccCCCC--CCCEEEEECCcCCCHHHHHHHH
Confidence              3 233333 57788888753         124556666765 599999988764  357999974  56999999999


Q ss_pred             HHHHHh
Q 036024          266 RRLEAL  271 (272)
Q Consensus       266 ~~l~~~  271 (272)
                      ++|+++
T Consensus       423 ~~l~~~  428 (433)
T 1zod_A          423 SLLGQA  428 (433)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.90  E-value=1.4e-22  Score=175.92  Aligned_cols=224  Identities=13%  Similarity=0.139  Sum_probs=155.7

Q ss_pred             c-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccc
Q 036024           23 C-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYE  101 (272)
Q Consensus        23 g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~  101 (272)
                      | +++.+|. .+ .+.-.+  .++++++++++|+||||.+++   +++|.++|+++|+++|+|++|..   +..+..+..
T Consensus       146 g~~~~~v~~-~~-~l~~~i--~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~---g~~~~~~~~  215 (416)
T 1qz9_A          146 GYTLRLVDS-PE-ELPQAI--DQDTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA---GAVPVDLHQ  215 (416)
T ss_dssp             SCEEEEESS-GG-GHHHHC--STTEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT---TTSCCCHHH
T ss_pred             CceEEEeCc-HH-HHHHHh--CCCceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccc---cCcCCChhh
Confidence            7 8888887 11 111112  257899999999999999998   89999999999999999999974   221222323


Q ss_pred             cCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHH-Hh---------------hhhhccCCcchHHHH
Q 036024          102 IPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDF-NR---------------IICTCFNGASNIAQA  164 (272)
Q Consensus       102 ~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~~~~~~~~~  164 (272)
                      +.    ..+++.|++|.++ +|.++ |+++++++....... ....+ ..               .......+.+...+.
T Consensus       216 ~~----~d~~~~s~~K~l~-~g~~~~g~l~~~~~~~~~l~~-~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (416)
T 1qz9_A          216 AG----ADYAIGCTYKYLN-GGPGSQAFVWVSPQLCDLVPQ-PLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLA  289 (416)
T ss_dssp             HT----CSEEEECSSSTTC-CCTTCCCEEEECTTTTTTSCC-SCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHH
T ss_pred             cC----CCEEEecCcccCC-CCCCCeEEEEECHHHHhccCC-CccccCccccccCCCCccCCCcchHHhcCCCCCHHHHH
Confidence            21    2388899999985 67777 999999887432111 10000 00               011223346666666


Q ss_pred             HHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCC----CceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024          165 GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----GIKVYGGI----NAPYVWAHFPGRKSWDVFAEILEKTHITT  236 (272)
Q Consensus       165 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~----~~~~~~i~l~~~~~~~~~~~ll~~~gi~v  236 (272)
                      ++.++++.....++++++++++++++++.+.|+++    |+++..+.    .+.++|+.+++  ..++...|.++ ||.+
T Consensus       290 a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~l~~~-gi~~  366 (416)
T 1qz9_A          290 MVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE--GYAVIQALIDR-GVIG  366 (416)
T ss_dssp             HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT--HHHHHHHHHTT-TEEC
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC--HHHHHHHHHhC-CcEe
Confidence            66666653322456888999999999999999986    88887764    35788998874  55666666655 9987


Q ss_pred             eCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          237 VPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       237 ~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                      ...      +.+++|+++.   .+++++++++++|+++
T Consensus       367 ~~~------~~~~lRis~~~~~~t~~~i~~~~~~l~~~  398 (416)
T 1qz9_A          367 DYR------EPRIMRFGFTPLYTTFTEVWDAVQILGEI  398 (416)
T ss_dssp             EEE------TTTEEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             ccC------CCCeEEEeCcccCCCHHHHHHHHHHHHHH
Confidence            532      3578999975   4899999999999875

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.90  E-value=6.7e-23  Score=180.21  Aligned_cols=239  Identities=13%  Similarity=0.089  Sum_probs=156.3

Q ss_pred             chHHhcccc-eeEEeecCCC----C----CcccCCCCC-----CC----ceEEEEecCCC-ccccCCCHHHHHHHHHHHH
Q 036024           15 LEDEVGKYC-NIEYLECGPG----N----NFFPDLKGT-----SR----TDIIFFCSPNN-PTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~----~----~~~~dl~~~-----~~----~~~i~~~~p~n-ptG~~~~~~~l~~l~~~~~   75 (272)
                      +...+...| +++.++++++    .    ++.+|++.+     ++    ++++++++|+| |||.+++.+++++|+++|+
T Consensus       126 ~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~  205 (456)
T 2ez2_A          126 TRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTE  205 (456)
T ss_dssp             HHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHH
T ss_pred             hHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHH
Confidence            567778888 9999988732    2    245564431     22    48899999998 9999999999999999999


Q ss_pred             HcCCEEEEcccCCc----------cccCCCCCCcc----ccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCC
Q 036024           76 NNGSIIIFDSAYAA----------YVTDGCPRSIY----EIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSG  140 (272)
Q Consensus        76 ~~~~~vi~D~~~~~----------~~~~~~~~~~~----~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~  140 (272)
                      +||+++|+||+|..          +.+.+.  ++.    ......+ ++++ |++|..+ +| +.||++++ +++     
T Consensus       206 ~~~i~li~De~~~~g~~~~~~~~~~~~~g~--~~~~~~~~~~~~~d-~~~~-S~kk~~~-~~-~gG~~~~~~~~~-----  274 (456)
T 2ez2_A          206 AHGIKVFYDATRCVENAYFIKEQEQGFENK--SIAEIVHEMFSYAD-GCTM-SGKKDCL-VN-IGGFLCMNDDEM-----  274 (456)
T ss_dssp             HTTCCEEEECTTHHHHHHHHHHHSTTCTTS--CHHHHHHHHHTTCS-EEEE-ETTTTTC-CS-SCEEEEESCHHH-----
T ss_pred             HcCCeEEEEccccccccccccccccccCCc--chhhhhhhhcccCC-EEEE-eCcccCC-CC-ceeEEEECCHHH-----
Confidence            99999999999985          233332  211    1111223 3444 6788765 66 78999984 555     


Q ss_pred             cchHHHHHhhhhhc-----cCCcchHHHHH-HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEe
Q 036024          141 FPVINDFNRIICTC-----FNGASNIAQAG-GLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWA  214 (272)
Q Consensus       141 ~~~~~~~~~~~~~~-----~~~~~~~~~~a-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i  214 (272)
                         .+.+.......     ..+.+.....+ +.+.++...    ++..++.+++.+++.+.|++.|+.+..+.+++++|+
T Consensus       275 ---~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~----~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~  347 (456)
T 2ez2_A          275 ---FSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ----YEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFL  347 (456)
T ss_dssp             ---HHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEE
T ss_pred             ---HHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHhcCCCccccCCCceEEEE
Confidence               34443332211     11223233333 333322111    344455567778888889888888877778899999


Q ss_pred             ec----CCCChHHH-----HHHHHHhcCeEeeC-CCCCC----------CCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          215 HF----PGRKSWDV-----FAEILEKTHITTVP-GSGFG----------PGGEEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       215 ~l----~~~~~~~~-----~~~ll~~~gi~v~~-g~~~~----------~~~~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                      .+    ++.+..++     ..+|++++||.+.+ |..|.          ..+.+++|+++.   .+++++++++++|+++
T Consensus       348 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~  427 (456)
T 2ez2_A          348 DARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKL  427 (456)
T ss_dssp             EHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             EhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            86    33334444     56665677998766 44331          122478999975   6899999999999875

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.90  E-value=1.5e-22  Score=174.65  Aligned_cols=206  Identities=17%  Similarity=0.107  Sum_probs=141.9

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++.+++|++|.. ++++.+++|.++|++||+++|+||+|.++...+...........    ..+.|+||.++ +
T Consensus       178 ~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~----~d~~t~sK~~~-~  252 (395)
T 3nx3_A          178 EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQIL----PDIMTSAKALG-C  252 (395)
T ss_dssp             TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCC----CSEEEECGGGT-T
T ss_pred             CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCC----CCEEEeccccc-C
Confidence            577888888777777766 77888999999999999999999999987554433222222222    22447899998 6


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH----h
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA----S  198 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~  198 (272)
                      |+|+||++++++.+       .+.+.......+.+.+++++.++.++++....   ++..++.+++.+++++.|.    .
T Consensus       253 G~~~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~  322 (395)
T 3nx3_A          253 GLSVGAFVINQKVA-------SNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKE---EKILENVNKLTPYLEQSLDELINE  322 (395)
T ss_dssp             TSCCEEEEECHHHH-------HHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEEchhhh-------hhhcCCcccCCCCCCCHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999988761       23333333344556788999888888863221   2233444444444444444    3


Q ss_pred             CC-CeEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          199 LG-IKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       199 ~g-~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ++ +.... ..+.++|+.++.. ...++...++++ ||.+.|+.      .+++|+++  ..+++++++++++|++++
T Consensus       323 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~------~~~iRi~~~~~~t~e~i~~~l~~l~~~l  392 (395)
T 3nx3_A          323 FDFCKKRK-GLGFMQGLSLDKSVKVAKVIQKCQEN-ALLLISCG------ENDLRFLPPLILQKEHIDEMSEKLRKAL  392 (395)
T ss_dssp             CTTEEEEE-EETTEEEEEECTTSCHHHHHHHHHHT-TEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEE-eEEEEEEEEeCCcchHHHHHHHHHHC-CCEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence            33 33333 3577889998753 456666666655 99998864      67999984  569999999999998763

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.90  E-value=8.2e-23  Score=179.63  Aligned_cols=241  Identities=17%  Similarity=0.144  Sum_probs=153.4

Q ss_pred             cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. +..    .++..| +++.++.+.-..+.-.+  .++++++++++|+||||.+++   +++|+++|+++
T Consensus       172 d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i--~~~tk~v~l~~p~NptG~v~~---l~~i~~la~~~  246 (464)
T 1ibj_A          172 EEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAI--GPQTKLVWLESPTNPRQQISD---IRKISEMAHAQ  246 (464)
T ss_dssp             CEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHC--CSSEEEEEECSSCTTTCCCCC---HHHHHHHHHTT
T ss_pred             CEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHh--ccCceEEEEeCCCCCCCEeec---HHHHHHHHHHc
Confidence            56777666554 443    246678 88888875111111102  268999999999999999997   89999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecc-cccccCCcchHHHHHhhhhhcc
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPE-ELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      |+++|+||+|.....   ..++ .+    ++.+++.|+||.++. +|+|+||+++++ ++        .+.+........
T Consensus       247 gi~livDea~~~g~~---~~~~-~~----~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l--------~~~l~~~~~~~g  310 (464)
T 1ibj_A          247 GALVLVDNSIMSPVL---SRPL-EL----GADIVMHSATKFIAGHSDVMAGVLAVKGEKL--------AKEVYFLQNSEG  310 (464)
T ss_dssp             TCEEEEECTTTCTTT---CCGG-GT----TCSEEEEETTTTTTCSSCCCCEEEEECSHHH--------HHHHHHHHHHTT
T ss_pred             CCEEEEECCCccccc---CChh-hc----CCEEEEECCcccccCCCCCcEEEEEEChHHH--------HHHHHHHHHhcC
Confidence            999999999975221   1122 22    345999999998864 489999999986 44        555555544344


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh--------------C-CCeEecCC---CceEEEeecC
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS--------------L-GIKVYGGI---NAPYVWAHFP  217 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~--------------~-g~~~~~~~---~~~~~~i~l~  217 (272)
                      ...+.+.+.++.+.++... .    +.+...++...+.+.|++              + ++++..++   .+.++++.++
T Consensus       311 ~~~~~~~~~a~~~al~~~~-~----r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~  385 (464)
T 1ibj_A          311 SGLAPFDCWLCLRGIKTMA-L----RIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG  385 (464)
T ss_dssp             CBCCHHHHHHHHHHHTTHH-H----HHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS
T ss_pred             CCCCHHHHHHHHhchhhHH-H----HHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC
Confidence            4467778877777776322 1    122222333333333332              2 34444443   3568888885


Q ss_pred             CCChHHHHHHHHHhcCeEeeCCC------------CCCC---------CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          218 GRKSWDVFAEILEKTHITTVPGS------------GFGP---------GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       218 ~~~~~~~~~~ll~~~gi~v~~g~------------~~~~---------~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +....+.+...++..||.+.+|.            .++.         .+++++|+++..  |++++++++|++++
T Consensus       386 ~~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~--edi~~li~~L~~al  459 (464)
T 1ibj_A          386 SVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI--EDVDDLISDLDIAF  459 (464)
T ss_dssp             CHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS--SCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHH
Confidence            32122223333445699998886            2221         125789999866  78899999888763

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.90  E-value=7e-23  Score=179.28  Aligned_cols=206  Identities=11%  Similarity=0.081  Sum_probs=147.8

Q ss_pred             CCceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++++++++..+|+||. .++++++++|.++|++||+++|+||+|.++...+...........+|  ++  |+||.+| +
T Consensus       222 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~D--i~--t~sK~l~-~  296 (439)
T 2oat_A          222 PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPD--IV--LLGKALS-G  296 (439)
T ss_dssp             TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS--EE--EECGGGG-T
T ss_pred             CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCc--EE--Eeccccc-C
Confidence            45666666555778996 56889999999999999999999999987655443222222222233  22  8999998 7


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI  201 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~  201 (272)
                      | +|+||++++++..        +.+.......+++.+++++.++.+.++....   ++..++++++.+++++.|+++++
T Consensus       297 G~~~~G~v~~~~~~~--------~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~  365 (439)
T 2oat_A          297 GLYPVSAVLCDDDIM--------LTIKPGEHGSTYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNELMKLPS  365 (439)
T ss_dssp             TSSCCEEEEECHHHH--------TTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTSCT
T ss_pred             CCCCeEEEEECHHHH--------hccCCCCcccCCCcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHhcC
Confidence            8 9999999998773        3333323344556788888888777763222   35678889999999999988754


Q ss_pred             eEe--cCCCceEEEeecCC---CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          202 KVY--GGINAPYVWAHFPG---RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       202 ~~~--~~~~~~~~~i~l~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      .+.  .+..|.++|+.++.   .+..++...++++ ||.+.|+.      .+++|+++  ..+++++++++++|++++
T Consensus       366 ~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~-Gv~v~~~~------~~~iRi~~~~~~t~e~i~~~l~~l~~~l  436 (439)
T 2oat_A          366 DVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDN-GLLAKPTH------GDIIRFAPPLVIKEDELRESIEIINKTI  436 (439)
T ss_dssp             TTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHT-TEECCBSS------SSEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEeeeeEEEEEEecCccHHHHHHHHHHHHC-CeEEecCC------CCEEEEECccCCCHHHHHHHHHHHHHHH
Confidence            321  12357788999874   2456777777765 99998742      57899975  569999999999998763

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.90  E-value=2e-22  Score=179.15  Aligned_cols=253  Identities=10%  Similarity=0.028  Sum_probs=170.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+... +...+...| +++.+|++++ ++..|++.+     +++++|++++|+||||.+.+   +++|.++|++
T Consensus       159 ~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~la~~  234 (497)
T 3mc6_A          159 PEIIAPVTAHAGFDKAAYYFGMKLRHVELDPT-TYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGKIAQK  234 (497)
T ss_dssp             CEEEEETTSCHHHHHHHHHSCCEEEEECBCTT-TCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTTHHHH
T ss_pred             ceEEEeCCccHHHHHHHHHcCCeEEEEecCcc-cCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHHHHHH
Confidence            55666666555 778888889 9999999863 455554442     57899999999999999977   8899999999


Q ss_pred             cCCEEEEcccCCccccC-----CCC-CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024           77 NGSIIIFDSAYAAYVTD-----GCP-RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI  150 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~-----~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~  150 (272)
                      +|+++++|++|+.+...     +.+ .+..... ..+..+++.|++|.++ ++.++||++++++.+..........+...
T Consensus       235 ~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~-~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  312 (497)
T 3mc6_A          235 YKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFR-VPGVTSISCDTHKYGF-APKGSSVIMYRNSDLRMHQYYVNPAWTGG  312 (497)
T ss_dssp             TTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTT-STTCCEEEEETTTTTC-CCSSCEEEECSSHHHHTTTSCCBTTCTTS
T ss_pred             hCCEEEEECcchhhhhhhhhhhcccCCcccccc-CCCCcEEEECchhhcC-CCCCceeEEecCHHHHhhhhcccccccCC
Confidence            99999999999865422     100 1011111 1223488889999874 67789999998876321110000000000


Q ss_pred             --hhhc-cCCcc---hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCCCceEEEeecCCCChH
Q 036024          151 --ICTC-FNGAS---NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPYVWAHFPGRKSW  222 (272)
Q Consensus       151 --~~~~-~~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~i~l~~~~~~  222 (272)
                        .... ..+.+   ..++.++...+.   ...+++..++..++++++.+.|++.  |+.+..+..+.++++..++.+..
T Consensus       313 ~~~~~~~~g~~~~~~~~a~~aal~~l~---~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~~~~~  389 (497)
T 3mc6_A          313 LYGSPTLAGSRPGAIVVGCWATMVNMG---ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTLNIH  389 (497)
T ss_dssp             CBCCSSSCSSCBHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTTTTHH
T ss_pred             CcCCcCcccCCcchhHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCCCCHH
Confidence              0000 00011   233444444443   3455788899999999999999994  89988665667777777766677


Q ss_pred             HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHh
Q 036024          223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEAL  271 (272)
Q Consensus       223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~  271 (272)
                      ++...|.++ ||.+.++..     +..+|+++. .+++++++++++|+++
T Consensus       390 ~l~~~L~~~-Gi~v~~~~~-----~~~~ri~~~~~t~e~i~~~~~~L~~~  433 (497)
T 3mc6_A          390 ELSDRLSKK-GWHFNALQK-----PVALHMAFTRLSAHVVDEICDILRTT  433 (497)
T ss_dssp             HHHHHHHTT-TCBCEECCS-----SCCEEEECCTTTTCTHHHHHHHHHHH
T ss_pred             HHHHHHHhC-CEEEecCCC-----CCeEEEEEeCCCHHHHHHHHHHHHHH
Confidence            777777666 999876542     246788864 4888999999998875

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.89  E-value=1.8e-22  Score=177.35  Aligned_cols=210  Identities=14%  Similarity=0.104  Sum_probs=146.1

Q ss_pred             CCceEEEEecC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCSP-NNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++++++++.+ +| ||.++ +++.+++|.++|++||+++|+||+|.++...+...........++    +.|+||.++ 
T Consensus       214 ~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~d----i~t~sK~l~-  287 (452)
T 3n5m_A          214 ETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPD----IITMAKGIT-  287 (452)
T ss_dssp             GGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCS----EEEECGGGG-
T ss_pred             CCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCC----EEeeccccc-
Confidence            35566777777 89 99766 888899999999999999999999998765553322322222222    336899998 


Q ss_pred             Cc-cceeEEEecccccccCCcchHHHHH------hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024          122 TG-VRLGWTVVPEELLFSSGFPVINDFN------RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID  194 (272)
Q Consensus       122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  194 (272)
                      .| +|+||++++++.        ++.+.      .+....+.+.+++++.++.++++....   +...++++++.+++++
T Consensus       288 ~G~~~ig~~~~~~~i--------~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~  356 (452)
T 3n5m_A          288 SAYLPLSATAVKREI--------YEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIEN---ENLIERSAQMGSLLLE  356 (452)
T ss_dssp             TTSSCCEEEEEEHHH--------HGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred             CCCcceEEEEECHHH--------HHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence            59 999999998887        44442      122335556888999988888873222   3345556666666666


Q ss_pred             HHHhC-----CCeEecCCCceEEEeecCC-CC---------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCC
Q 036024          195 TLASL-----GIKVYGGINAPYVWAHFPG-RK---------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGH  257 (272)
Q Consensus       195 ~L~~~-----g~~~~~~~~~~~~~i~l~~-~~---------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~  257 (272)
                      .|.++     .+....+ .|.++++.+.. ..         ..++...++++ ||.+.|+..|.+...+++||+  +..+
T Consensus       357 ~L~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~~~~~~~~iRi~~~~~~t  434 (452)
T 3n5m_A          357 QLKEEIGEHPLVGDIRG-KGLLVGIELVNDKETKEPIDNDKIASVVNACKEK-GLIIGRNGMTTAGYNNILTLAPPLVIS  434 (452)
T ss_dssp             HHHHHHTTCTTEEEEEE-SSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHT-TEECEECTTSSTTCCCEEEECCCTTCC
T ss_pred             HHHHHHhcCCCeEEEEE-EEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHC-CcEEeecCcccCCCCCEEEEECCCCCC
Confidence            66543     2334443 56677777631 11         13456666655 999999988876667899997  5669


Q ss_pred             HHHHHHHHHHHHHhC
Q 036024          258 RESILEASRRLEALF  272 (272)
Q Consensus       258 ~~~i~~~l~~l~~~l  272 (272)
                      ++++++++++|++++
T Consensus       435 ~e~i~~~l~~l~~~l  449 (452)
T 3n5m_A          435 SEEIAFVIGTLKTAM  449 (452)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998763

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.89  E-value=1.1e-22  Score=177.10  Aligned_cols=194  Identities=17%  Similarity=0.172  Sum_probs=138.9

Q ss_pred             EEEEecC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-c
Q 036024           48 IIFFCSP-NNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-V  124 (272)
Q Consensus        48 ~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~  124 (272)
                      .+++++| |||||. +++++.+++|.++|++||+++|+||+|.++...+......... ...++   .||||.+| +| +
T Consensus       214 ~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~-~~~d~---~t~sK~~~-~G~~  288 (419)
T 2eo5_A          214 AGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFN-TVPDV---ITLAKALG-GGIM  288 (419)
T ss_dssp             EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSE---EEECGGGG-TTTS
T ss_pred             EEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcC-CCCCE---EEeccccc-CCcc
Confidence            3444556 567896 6788889999999999999999999999876554322222222 22232   27999999 69 9


Q ss_pred             ceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEe
Q 036024          125 RLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVY  204 (272)
Q Consensus       125 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~  204 (272)
                      |+||+++++++. .        + ......+.+.+++++.++.++++..     ++..++++++++++.+.|.++ +...
T Consensus       289 riG~~~~~~~~~-~--------~-~~~~~~t~~~n~~~~~aa~aal~~~-----~~~~~~~~~~~~~l~~~L~~~-~~~~  352 (419)
T 2eo5_A          289 PIGATIFRKDLD-F--------K-PGMHSNTFGGNALACAIGSKVIDIV-----KDLLPHVNEIGKIFAEELQGL-ADDV  352 (419)
T ss_dssp             CCEEEEEEGGGC-C--------C-------CCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHTTS-SSEE
T ss_pred             ceEEEEEchHhh-c--------C-CcccCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHh-hhhe
Confidence            999999988873 2        2 1122334557889999888888631     227789999999999999886 4334


Q ss_pred             cCCCceEEEeecC-C-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          205 GGINAPYVWAHFP-G-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       205 ~~~~~~~~~i~l~-~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      .+ .|.++|+.+. . .... +...|+ ++||.+.|+.      .+++|+++  ..+++++++++++|+++
T Consensus       353 ~~-~g~~~~i~~~~~~~~~~-~~~~l~-~~Gv~v~~~~------~~~lRis~~~~~t~e~i~~~l~~l~~~  414 (419)
T 2eo5_A          353 RG-IGLAWGLEYNEKKVRDR-IIGESF-KRGLLLLPAG------RSAIRVIPPLVISEEEAKQGLDILKKV  414 (419)
T ss_dssp             EE-ETTEEEEECSCHHHHHH-HHHHHH-HTTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             Ee-eeEEEEEEEecCccHHH-HHHHHH-HCCCEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            43 5778888884 2 1233 666666 5599999864      57899974  56999999999999875

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.89  E-value=5.6e-22  Score=167.16  Aligned_cols=240  Identities=16%  Similarity=0.144  Sum_probs=158.0

Q ss_pred             cccccccCccc-chHHh----cccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHH-
Q 036024            4 DSSVIVGQAGD-LEDEV----GKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN-   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~----~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~-   76 (272)
                      |.|++..+.+. +...+    +..| +++.++...-..+.-.++  ++++++++++|+||||.+++   +++|.++|++ 
T Consensus        38 ~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~--~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~  112 (331)
T 1pff_A           38 DHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK--PNTRIVYFETPANPTLKVID---IEDAVKQARKQ  112 (331)
T ss_dssp             CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC--TTEEEEEEESSCTTTCCCCC---HHHHHHHHTTS
T ss_pred             CEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc--CCCeEEEEECCCCCcCcccC---HHHHHHHHhhh
Confidence            55666666555 44443    3467 888887632111111122  67899999999999999997   8999999999 


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccc-eeEEEecc-cccccCCcchHHHHHhhhhh-
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVR-LGWTVVPE-ELLFSSGFPVINDFNRIICT-  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r-~G~~~~~~-~~~~~~~~~~~~~~~~~~~~-  153 (272)
                      +|+++|+|++|..+....   ++ .    .++.+++.|+||.+|.+|.| +||+++++ ++        .+.+...... 
T Consensus       113 ~~~~li~D~a~~~~~~~~---~~-~----~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~--------~~~l~~~~~~~  176 (331)
T 1pff_A          113 KDILVIVDNTFASPILTN---PL-D----LGVDIVVHSATKYINGHTDVVAGLVCSRADII--------AKVKSQGIKDI  176 (331)
T ss_dssp             SSCEEEEECTTTHHHHCC---GG-G----GTCSEEEEETTTTTSSSSSCCCEEEEECHHHH--------HHHHHTCCCCC
T ss_pred             cCCEEEEECCCcccccCC---hh-h----cCCcEEEEECccccCCCCCceEEEEEeCcHHH--------HHHHHHHHHhh
Confidence            999999999998655431   22 2    23459999999999989999 79999988 66        5666655544 


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---------------CCeEecC---CCceEEEee
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---------------GIKVYGG---INAPYVWAH  215 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------------g~~~~~~---~~~~~~~i~  215 (272)
                      ...+.+...+.++...+.     +...+.+...++.+.+.+.+++.               ++++.++   ..+.++++.
T Consensus       177 ~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  251 (331)
T 1pff_A          177 TGAIISPHDAWLITRGTL-----TLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFD  251 (331)
T ss_dssp             CCCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEE
T ss_pred             cCCCCCHHHHHHHHcCcc-----hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEE
Confidence            344566666665555543     22334455566666666666543               1222211   135677788


Q ss_pred             cCCCChHHHHHHHHHhcCeEeeCCC---------CCC---------------CCCCCeEEEEcc--CCHHHHHHHHHHHH
Q 036024          216 FPGRKSWDVFAEILEKTHITTVPGS---------GFG---------------PGGEEYIRISGF--GHRESILEASRRLE  269 (272)
Q Consensus       216 l~~~~~~~~~~~ll~~~gi~v~~g~---------~~~---------------~~~~~~~R~s~~--~~~~~i~~~l~~l~  269 (272)
                      ++  +. +...+++++.||.+.+.+         .|.               ....+.+|+|+.  .++++++++.+.|+
T Consensus       252 ~~--~~-~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~  328 (331)
T 1pff_A          252 VD--GL-EKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALD  328 (331)
T ss_dssp             CS--SH-HHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred             EC--CH-HHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHH
Confidence            76  33 445566677799876553         110               012589999974  47889999999998


Q ss_pred             HhC
Q 036024          270 ALF  272 (272)
Q Consensus       270 ~~l  272 (272)
                      +++
T Consensus       329 ~~~  331 (331)
T 1pff_A          329 LVL  331 (331)
T ss_dssp             TC-
T ss_pred             HhC
Confidence            764

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.89  E-value=8.7e-22  Score=171.27  Aligned_cols=229  Identities=17%  Similarity=0.169  Sum_probs=152.3

Q ss_pred             eeEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024           24 NIEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP   96 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~   96 (272)
                      +.++++.+++ ++.+|++.+      +++++|++++|+||+-.     ++++|.++|+++|+++|+||+|. ++.+.+..
T Consensus       146 ~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~-----~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~  219 (425)
T 3ecd_A          146 NALQYGVSRD-TMLIDYDQVEALAQQHKPSLIIAGFSAYPRKL-----DFARFRAIADSVGAKLMVDMAHIAGVIAAGRH  219 (425)
T ss_dssp             EEEEECCCTT-TSSCCHHHHHHHHHHHCCSEEEEECSCCCSCC-----CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSS
T ss_pred             eeeecCCCcc-cCccCHHHHHHHHhhcCCcEEEEccccCCCcC-----CHHHHHHHHHHcCCEEEEECcChHhhhhcccc
Confidence            4456665544 455664431      57899999999997533     37999999999999999999965 33333322


Q ss_pred             CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC-CcchHHHHHHHHhcccccH
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN-GASNIAQAGGLACLSSEGL  175 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~  175 (272)
                      .+....   .+  ++++|+||.+  +|.|.||++++++.+       .+.+......... +++...+.++...+.....
T Consensus       220 ~~~~~~---~d--i~~~s~sK~l--~g~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~  285 (425)
T 3ecd_A          220 ANPVEH---AH--VVTSTTHKTL--RGPRGGFVLTNDEEI-------AKKINSAVFPGLQGGPLMHVIAGKAVAFGEALT  285 (425)
T ss_dssp             CCGGGT---CS--EEEEESSGGG--CCCSCEEEEESCHHH-------HHHHHHHHC-----CCCHHHHHHHHHHHHHHTS
T ss_pred             cCchhc---Cc--EEEecCCccc--CCCCcEEEEeCCHHH-------HHHHHhhhCccccCCccHHHHHHHHHHHHHHHH
Confidence            222111   12  8899999988  567899999986542       4444443332222 2344444444444433333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecCC-CChHHHHHHHHHhcCeEee----CCCCCCCCCCCe
Q 036024          176 EAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFPG-RKSWDVFAEILEKTHITTV----PGSGFGPGGEEY  249 (272)
Q Consensus       176 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~----~g~~~~~~~~~~  249 (272)
                      ++.++.+++++++++++.+.|.+.|+.+..+ ..++++|+.++. ..+.+.+.++++++||.+.    ||..+.+...+.
T Consensus       286 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~  365 (425)
T 3ecd_A          286 DDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSG  365 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSE
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccc
Confidence            5668889999999999999999999988764 467889998863 2234555555677799999    544333344578


Q ss_pred             EEEEcc------CCHHHHHHHHHHHHHhC
Q 036024          250 IRISGF------GHRESILEASRRLEALF  272 (272)
Q Consensus       250 ~R~s~~------~~~~~i~~~l~~l~~~l  272 (272)
                      +|+++.      .++++++++++.|++++
T Consensus       366 iRi~~~~~~~~~~~~e~i~~~~~~l~~~l  394 (425)
T 3ecd_A          366 IRLGTPAGTTRGFGAAEFREVGRLILEVF  394 (425)
T ss_dssp             EEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             eeccchhheeccCCHHHHHHHHHHHHHHH
Confidence            999931      24899999999988753

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.89  E-value=4.8e-22  Score=173.48  Aligned_cols=203  Identities=11%  Similarity=-0.004  Sum_probs=143.4

Q ss_pred             CceEEEEecC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           45 RTDIIFFCSP-NNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        45 ~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++.+ |||||. .++++++++|+++|+++|+++|+||+|.++...+......... ...+   +.|+||.++ +
T Consensus       204 ~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~-~~~d---~~t~sK~l~-~  278 (429)
T 1s0a_A          204 EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAE-IAPD---ILCLGKALT-G  278 (429)
T ss_dssp             TEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCS---EEEECGGGG-T
T ss_pred             CEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcC-CCCC---EEEeccccc-C
Confidence            4455554444 699995 6678889999999999999999999998765444222222222 2222   227899998 7


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHhh-----hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNRI-----ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL  196 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L  196 (272)
                      | +|+||+++++++        ++.+...     ....+.+.+.+++.++.++++....   ++..++++++++++++.|
T Consensus       279 G~~~iG~~~~~~~~--------~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L  347 (429)
T 1s0a_A          279 GTMTLSATLTTREV--------AETISNGEAGCFMHGPTFMGNPLACAAANASLAILES---GDWQQQVADIEVQLREQL  347 (429)
T ss_dssp             SSSCCEEEEECHHH--------HHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHH
T ss_pred             CCccceEEEeCHHH--------HHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHH
Confidence            8 999999998877        4555432     1223445788888888888763211   245677888889999998


Q ss_pred             HhC----CCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHH
Q 036024          197 ASL----GIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLE  269 (272)
Q Consensus       197 ~~~----g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~  269 (272)
                      +++    ++....+ .|.++|+.++. .+..++...|+++ ||.+.|+       .+++|++  +..+++++++++++|+
T Consensus       348 ~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~l~~~l~~~-Gi~v~~~-------~~~iRis~~~~~t~e~i~~~~~~l~  418 (429)
T 1s0a_A          348 APARDAEMVADVRV-LGAIGVVETTHPVNMAALQKFFVEQ-GVWIRPF-------GKLIYLMPPYIILPQQLQRLTAAVN  418 (429)
T ss_dssp             GGGGGCTTEEEEEE-ETTEEEEEESSCBCHHHHHHHHHHT-TEECCCB-------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             HHHhcCCCEEEEEE-eeEEEEEEECCcccHHHHHHHHHHC-CCEEecc-------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence            875    3443343 46789999874 3556677777654 9999873       2689999  4679999999999998


Q ss_pred             HhC
Q 036024          270 ALF  272 (272)
Q Consensus       270 ~~l  272 (272)
                      +++
T Consensus       419 ~~~  421 (429)
T 1s0a_A          419 RAV  421 (429)
T ss_dssp             HHT
T ss_pred             HHH
Confidence            864

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.89  E-value=1e-22  Score=177.93  Aligned_cols=204  Identities=10%  Similarity=0.067  Sum_probs=145.3

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++++++++..+|+||.+ ++++++++|.++|+++|+++|+||+|.++...+...........++  +  .|+||.+| +
T Consensus       211 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~d--i--~t~sK~l~-~  285 (433)
T 1z7d_A          211 PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPD--V--ILLGKALS-G  285 (433)
T ss_dssp             TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS--E--EEECGGGG-T
T ss_pred             CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCC--E--EEECcccc-C
Confidence            567776666557789975 6888999999999999999999999987654443222222222223  2  28999999 8


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--  199 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--  199 (272)
                      | +|+||+++++++.        +.+.......+++.+++++.++.+.++....   ++..++++++.+++++.|+++  
T Consensus       286 G~~~~G~v~~~~~~~--------~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~  354 (433)
T 1z7d_A          286 GHYPISAVLANDDIM--------LVIKPGEHGSTYGGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELK  354 (433)
T ss_dssp             TSSCCEEEEECHHHH--------TTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCeEEEEECHHHH--------hhhccccccccCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHH
Confidence            9 9999999998773        3333222334455788888888887763222   246677888888888888765  


Q ss_pred             CCe---EecCCCceEEEeecCCC--ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          200 GIK---VYGGINAPYVWAHFPGR--KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       200 g~~---~~~~~~~~~~~i~l~~~--~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      ++.   ... ..|.++|+.++..  +..++...|+++ ||.+.|+      +.+++|+++  ..+++++++++++|+++
T Consensus       355 ~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~l~~~-Gv~v~~~------~~~~iRi~~~~~~t~e~i~~~l~~l~~~  425 (433)
T 1z7d_A          355 DSKIVRDVR-GKGLLCAIEFKNELVNVLDICLKLKEN-GLITRDV------HDKTIRLTPPLCITKEQLDECTEIIVKT  425 (433)
T ss_dssp             TCTTEEEEE-EETTEEEEEECTTTCCHHHHHHHHHHT-TEECCEE------TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             hCCCeEEEE-eeeeEEEEEEccChhHHHHHHHHHHHC-CeEEecC------CCCEEEEECCcCCCHHHHHHHHHHHHHH
Confidence            432   222 3577889998742  456677777765 9999875      257899975  46999999999999875

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.89  E-value=1e-21  Score=172.29  Aligned_cols=228  Identities=17%  Similarity=0.188  Sum_probs=154.5

Q ss_pred             eeEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024           24 NIEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP   96 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~   96 (272)
                      .+++++++++ ++.+|++.+      ++++++++++|+||++.     ++++|.++|+++|+++|+|++|. ++.+.+..
T Consensus       159 ~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~  232 (447)
T 3h7f_A          159 ENGFYGVDPA-THLIDMDAVRATALEFRPKVIIAGWSAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLH  232 (447)
T ss_dssp             EEEEECCCTT-TCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSS
T ss_pred             EEEEcCcCcc-cCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCC
Confidence            5566666644 455664432      46889999999999987     48999999999999999999975 33443322


Q ss_pred             CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC-CcchHHHHHHHHhcccccH
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN-GASNIAQAGGLACLSSEGL  175 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~  175 (272)
                      ....  .. .+  +++.|+||+++  |+|.||+++++++        .+.+......... +++...+.++...+.....
T Consensus       233 ~~~~--~~-~d--i~~~s~sK~l~--G~~gG~i~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~  297 (447)
T 3h7f_A          233 PSPV--PH-AD--VVSTTVHKTLG--GGRSGLIVGKQQY--------AKAINSAVFPGQQGGPLMHVIAGKAVALKIAAT  297 (447)
T ss_dssp             CCST--TT-CS--EEEEESSGGGC--CCSCEEEEECGGG--------HHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTS
T ss_pred             CCCC--CC-Cc--EEEecCCcCCC--CCCeEEEEECHHH--------HHHHhhhcCCcccCCccHHHHHHHHHHHHHhhC
Confidence            2221  11 12  78999999884  6788999998877        5555544433332 2333334444444443333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhC-----CCeEec-CCCceEEEeecCCC-ChHHHHHHHHHhcCeEee----CCCCCCC
Q 036024          176 EAVHSVVDYYKENTKILIDTLASL-----GIKVYG-GINAPYVWAHFPGR-KSWDVFAEILEKTHITTV----PGSGFGP  244 (272)
Q Consensus       176 ~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~-~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~----~g~~~~~  244 (272)
                      .+.++..+++.++++++.+.|.+.     |+++.. +..++++|+.+.+. ...+.+.++++++||.+.    |+....+
T Consensus       298 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p  377 (447)
T 3h7f_A          298 PEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPP  377 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCC
Confidence            456889999999999999999988     888865 34678889988632 245566777788899998    6643344


Q ss_pred             CCCCeEEEEcc------CCHHHHHHHHHHHHHhC
Q 036024          245 GGEEYIRISGF------GHRESILEASRRLEALF  272 (272)
Q Consensus       245 ~~~~~~R~s~~------~~~~~i~~~l~~l~~~l  272 (272)
                      ..++++|++..      .++++++++++.|++++
T Consensus       378 ~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l  411 (447)
T 3h7f_A          378 MVTSGLRIGTPALATRGFGDTEFTEVADIIATAL  411 (447)
T ss_dssp             ---CEEEEECHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHH
Confidence            45678999852      47899999999998753

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.89  E-value=3.8e-22  Score=175.86  Aligned_cols=248  Identities=18%  Similarity=0.153  Sum_probs=156.0

Q ss_pred             cccccCccc-chHHhcccc-eeEEeecCC----C----CCcccCCCCC---------CCceEEEEecCCCcc-ccCCCHH
Q 036024            6 SVIVGQAGD-LEDEVGKYC-NIEYLECGP----G----NNFFPDLKGT---------SRTDIIFFCSPNNPT-GHAATQN   65 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~----~----~~~~~dl~~~---------~~~~~i~~~~p~npt-G~~~~~~   65 (272)
                      |++..+++. +...+...| +++.++.+.    +    .++.+|++.+         +++++|++++||||| |.+++.+
T Consensus       125 viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~  204 (467)
T 1ax4_A          125 VFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMS  204 (467)
T ss_dssp             EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHH
T ss_pred             EEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChh
Confidence            555544323 455666677 777766532    1    1234453331         268999999999999 8999999


Q ss_pred             HHHHHHHHHHHcCCEEEEcccCCc--c--------ccCCCCCCccccC----CCCCceEEEecCccccCCC-ccceeEEE
Q 036024           66 QLEQLVEFARNNGSIIIFDSAYAA--Y--------VTDGCPRSIYEIP----GAREVAIEISSFSKFSGFT-GVRLGWTV  130 (272)
Q Consensus        66 ~l~~l~~~~~~~~~~vi~D~~~~~--~--------~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~-g~r~G~~~  130 (272)
                      ++++|+++|++||+++|+|+++..  .        .+.+  .++..+.    ...+  +++.|+||.+|++ |   ||++
T Consensus       205 ~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~  277 (467)
T 1ax4_A          205 NLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKN--ATIKEVIFDMYKYAD--ALTMSAKKDPLLNIG---GLVA  277 (467)
T ss_dssp             HHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTT--CCHHHHHHHHGGGCS--EEEEETTSTTCCSSC---EEEE
T ss_pred             HHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCC--Cchhhhhhhhccccc--eEEEeccccCCCCcc---eEEE
Confidence            999999999999999999998653  1        1222  2222221    1123  5668999999865 4   6776


Q ss_pred             ec-c-cccccCCcchHHHHHhhhhh-----ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Q 036024          131 VP-E-ELLFSSGFPVINDFNRIICT-----CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKV  203 (272)
Q Consensus       131 ~~-~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~  203 (272)
                      .+ + ++        ++.+......     ...+.+...+.++...+.....   ++..++..++.+++.+.|++.|+.+
T Consensus       278 ~~d~~~l--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~  346 (467)
T 1ax4_A          278 IRDNEEI--------FTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLREAGIPI  346 (467)
T ss_dssp             ESSCHHH--------HHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred             eCCHHHH--------HHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHhCCCCc
Confidence            77 4 45        3333322211     1112333333323323331111   1223334467788899998878888


Q ss_pred             ecCCCceEEEee-------cCC--CChHHHHHHHHHhcCeEeeC-CCCC-CC---------CCCCeEEEEcc---CCHHH
Q 036024          204 YGGINAPYVWAH-------FPG--RKSWDVFAEILEKTHITTVP-GSGF-GP---------GGEEYIRISGF---GHRES  260 (272)
Q Consensus       204 ~~~~~~~~~~i~-------l~~--~~~~~~~~~ll~~~gi~v~~-g~~~-~~---------~~~~~~R~s~~---~~~~~  260 (272)
                      ..+.+++++|+.       ++.  .+..++...|++++||.+.| |+.+ +.         ...+++|+++.   .++++
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~  426 (467)
T 1ax4_A          347 QYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDH  426 (467)
T ss_dssp             CSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHH
T ss_pred             ccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHH
Confidence            777889999999       432  23456777775677999998 5432 11         12479999975   68999


Q ss_pred             HHHHHHHHHHh
Q 036024          261 ILEASRRLEAL  271 (272)
Q Consensus       261 i~~~l~~l~~~  271 (272)
                      +++++++|+++
T Consensus       427 i~~~~~~l~~~  437 (467)
T 1ax4_A          427 MDYIADALIGL  437 (467)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHHHHH
Confidence            99999999875

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.89  E-value=1.4e-21  Score=168.90  Aligned_cols=246  Identities=14%  Similarity=0.110  Sum_probs=162.0

Q ss_pred             cccccccCccc-chH-H--hcccc---eeEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LED-E--VGKYC---NIEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~~-~--~~~~g---~~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      |.|++..+.+. +.. .  ....|   ++++++++++ ++..|++.+      ++++++++ +|+|+ |...+   +++|
T Consensus       110 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~~~---l~~i  183 (405)
T 2vi8_A          110 DTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPE-THVIDYDDVREKARLHRPKLIVA-AAAAY-PRIID---FAKF  183 (405)
T ss_dssp             CEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTT-TCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSCCC---HHHH
T ss_pred             CEEEEecccccchhcccchhhhccceeEEEecccccc-cCCcCHHHHHHHHHhcCCeEEEE-eCCCC-CccCC---HHHH
Confidence            56666665544 322 1  12333   5666766533 455664432      26788887 44443 34434   8999


Q ss_pred             HHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHh
Q 036024           71 VEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNR  149 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~  149 (272)
                      .++|+++|+++|+||+|........... ..+. ..+  ++++|+||.++ .+|   ||+++++++        .+.+..
T Consensus       184 ~~l~~~~~~~li~Dea~~~g~~~~~~~~-~~~~-~~d--i~~~s~sK~~~g~~g---G~~~~~~~~--------~~~l~~  248 (405)
T 2vi8_A          184 REIADEVGAYLMVDMAHIAGLVAAGLHP-NPVP-YAH--FVTTTTHKTLRGPRG---GMILCQEQF--------AKQIDK  248 (405)
T ss_dssp             HHHHHHHTCEEEEECTTTHHHHHTTSSC-CSTT-TCS--EEEEESSSTTCCCSC---EEEEECHHH--------HHHHHH
T ss_pred             HHHHHHcCCEEEEEccccccccccCcCC-Cccc-cCC--EEEEeccccCCCCCC---eEEEEcHHH--------HHHHHh
Confidence            9999999999999999984332221111 1111 122  88999999997 555   999998766        455554


Q ss_pred             hhhhccCCc-chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecC--CCChHHHH
Q 036024          150 IICTCFNGA-SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFP--GRKSWDVF  225 (272)
Q Consensus       150 ~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~--~~~~~~~~  225 (272)
                      .......+. +.....++.+++......++++.+++++++++++.+.|+++|+++..+ ..++++|+.++  +.+..++.
T Consensus       249 ~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (405)
T 2vi8_A          249 AIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAE  328 (405)
T ss_dssp             HHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHH
T ss_pred             hhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEccCCCCCHHHHH
Confidence            433333233 344444444555432225678899999999999999999989988775 46889999987  33455555


Q ss_pred             HHHHHhcCeEeeCCCC----CCCCCCCeEEEEcc------CCHHHHHHHHHHHHHh
Q 036024          226 AEILEKTHITTVPGSG----FGPGGEEYIRISGF------GHRESILEASRRLEAL  271 (272)
Q Consensus       226 ~~ll~~~gi~v~~g~~----~~~~~~~~~R~s~~------~~~~~i~~~l~~l~~~  271 (272)
                      ..| .++||.+.+|..    +++...+++|+++.      .+++++++++++|+++
T Consensus       329 ~~l-~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~  383 (405)
T 2vi8_A          329 KVL-DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLV  383 (405)
T ss_dssp             HHH-HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             HHH-HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHH
Confidence            555 556999999863    33334578999975      3799999999999875

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.89  E-value=8.6e-22  Score=171.03  Aligned_cols=224  Identities=17%  Similarity=0.143  Sum_probs=148.9

Q ss_pred             eeEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc-cCCCC
Q 036024           24 NIEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV-TDGCP   96 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~-~~~~~   96 (272)
                      ..++++.+  .++..|++.+      .+++++++++|+||+  ..+   +++|.++|++||+++|+||+|.... ..+..
T Consensus       144 ~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~~  216 (420)
T 3gbx_A          144 NIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGVY  216 (420)
T ss_dssp             EEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTSS
T ss_pred             eEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--ccC---HHHHHHHHHHcCCEEEEECCcchhceecccC
Confidence            44555555  3445554432      368999999999985  444   8999999999999999999986433 23221


Q ss_pred             CCccccCCCCCceEEEecCccccCCCccceeEEEecc---cccccCCcchHHHHHhhhhhc-cCCcchHHHHHHHHhccc
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE---ELLFSSGFPVINDFNRIICTC-FNGASNIAQAGGLACLSS  172 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~  172 (272)
                      ...  ..   ...++++|+||.++  |.+.||+++++   ++        .+.+....... ..+++...+.++...+..
T Consensus       217 ~~~--~~---~~di~~~s~sK~~~--g~~gg~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~  281 (420)
T 3gbx_A          217 PNP--VP---HAHVVTTTTHKTLA--GPRGGLILAKGGDEEL--------YKKLNSAVFPSAQGGPLMHVIAGKAVALKE  281 (420)
T ss_dssp             CCS--TT---TSSEEEEESSGGGC--SCSCEEEEESSCCHHH--------HHHHHHHHC----CCCCHHHHHHHHHHHHH
T ss_pred             Ccc--cc---cCCEEEeecccCCC--CCCceEEEEcCCcHHH--------HHHhhhhcCCCCCCCcchhHHHHHHHHHHH
Confidence            211  11   12388999999994  34459999987   34        44444433322 223444444444434433


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecCC-CChHHHHHHHHHhcCeEeeC-------CCCCC
Q 036024          173 EGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFPG-RKSWDVFAEILEKTHITTVP-------GSGFG  243 (272)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~-------g~~~~  243 (272)
                      ...++.++++++++++++++.+.|.+.|+++..+ ..++++|+.++. ....+.+.++++++||.+.+       +..|+
T Consensus       282 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~  361 (420)
T 3gbx_A          282 AMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFV  361 (420)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTT
T ss_pred             HHhHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCC
Confidence            3345668889999999999999999999988764 467889988863 23344555566777999998       33332


Q ss_pred             CCCCCeEEEEcc------CCHHHHHHHHHHHHHhC
Q 036024          244 PGGEEYIRISGF------GHRESILEASRRLEALF  272 (272)
Q Consensus       244 ~~~~~~~R~s~~------~~~~~i~~~l~~l~~~l  272 (272)
                         ...+|+++.      .++++++++++.|++++
T Consensus       362 ---~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l  393 (420)
T 3gbx_A          362 ---TSGIRIGSPAVTRRGFKEAEVKELAGWMCDVL  393 (420)
T ss_dssp             ---CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             ---CcceEEecchhcccCCCHHHHHHHHHHHHHHH
Confidence               356999963      35789999999988753

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.88  E-value=2.8e-21  Score=167.67  Aligned_cols=247  Identities=15%  Similarity=0.092  Sum_probs=159.7

Q ss_pred             cccccccCccc-chH---Hhcccc---eeEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHH
Q 036024            4 DSSVIVGQAGD-LED---EVGKYC---NIEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQL   70 (272)
Q Consensus         4 d~~~~~~~~~~-~~~---~~~~~g---~~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l   70 (272)
                      |.|++..+.+. +..   .....|   .+++++.+  .++.+|++.+      +++++|++++|+|  |..++   +++|
T Consensus       112 d~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~---l~~i  184 (417)
T 3n0l_A          112 DKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVID---FAKF  184 (417)
T ss_dssp             CEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCC---HHHH
T ss_pred             CEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCC---HHHH
Confidence            56777666443 222   222333   45555565  3555664432      5789999888886  77777   8999


Q ss_pred             HHHHHHcCCEEEEcccCC-ccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-cccccCCcchHHHHH
Q 036024           71 VEFARNNGSIIIFDSAYA-AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-ELLFSSGFPVINDFN  148 (272)
Q Consensus        71 ~~~~~~~~~~vi~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~~~~~~~~~~~~~~~  148 (272)
                      .++|+++|+++|+|++|. +..+.+.......     ...++++|+||.+  +|.|.||+++++ ++        .+.+.
T Consensus       185 ~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~~~~--------~~~~~  249 (417)
T 3n0l_A          185 REIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTNDEEL--------AKKIN  249 (417)
T ss_dssp             HHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESCHHH--------HHHHH
T ss_pred             HHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECCHHH--------HHHHh
Confidence            999999999999999975 3333332221111     1238899999988  677889999984 55        45555


Q ss_pred             hhhhhcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCCC-ChHHHH
Q 036024          149 RIICTCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPGR-KSWDVF  225 (272)
Q Consensus       149 ~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~~-~~~~~~  225 (272)
                      ....... .+++...+.++...+......++++.+++++++++++.+.|.+.|+.+.. +..+.++|+.++.. .+.+.+
T Consensus       250 ~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (417)
T 3n0l_A          250 SAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDA  329 (417)
T ss_dssp             HHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTSSSCHHHH
T ss_pred             hhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCceeccCCCCceEEEEEcccCCCCHHHH
Confidence            4443322 23344444444444443233556888999999999999999998888765 23567888988632 234445


Q ss_pred             HHHHHhcCeEeeCCCCCCC----CCCCeEEEEcc------CCHHHHHHHHHHHHHhC
Q 036024          226 AEILEKTHITTVPGSGFGP----GGEEYIRISGF------GHRESILEASRRLEALF  272 (272)
Q Consensus       226 ~~ll~~~gi~v~~g~~~~~----~~~~~~R~s~~------~~~~~i~~~l~~l~~~l  272 (272)
                      .++++++||.+.++..+..    .....+|+++.      .+++++++++++|++++
T Consensus       330 ~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l  386 (417)
T 3n0l_A          330 DLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADIL  386 (417)
T ss_dssp             HHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHH
Confidence            5566777999987654322    12467999952      36899999999998763

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.88  E-value=7.1e-22  Score=173.96  Aligned_cols=209  Identities=10%  Similarity=0.008  Sum_probs=143.6

Q ss_pred             CCceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++++|++..++|++|. +++++.+++|.++|++||+++|+||+|.++...+...........++    +.++||.++ +
T Consensus       220 ~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pd----i~t~sK~l~-g  294 (460)
T 3gju_A          220 ETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPD----LITIAKGLT-S  294 (460)
T ss_dssp             GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCS----EEEECGGGT-T
T ss_pred             CCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCC----eeeeehhhc-C
Confidence            34566666666778877 77888899999999999999999999998765543322222322223    336899998 6


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHH
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILI  193 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~  193 (272)
                      | +|+||+++++++        ++.+..       .....+++.+++++.|+.++++.... +..++.++.....++.+.
T Consensus       295 G~~~lg~v~~~~~i--------~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~  366 (460)
T 3gju_A          295 AYAPLSGVIVADRV--------WQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELA  366 (460)
T ss_dssp             TSSCCEEEEEEHHH--------HHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEECHHH--------HHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence            7 899999999887        555532       23445566888999999888873222 334445555555555555


Q ss_pred             HHHHhCC-CeEecCCCceEEEeecCCCC------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCH
Q 036024          194 DTLASLG-IKVYGGINAPYVWAHFPGRK------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHR  258 (272)
Q Consensus       194 ~~L~~~g-~~~~~~~~~~~~~i~l~~~~------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~  258 (272)
                      +.+.+++ +....+ .|.++++.+....            ..++...++++ ||.+.|+.     ..+++||+  +..++
T Consensus       367 ~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~-----~~~~iRi~~~~~~t~  439 (460)
T 3gju_A          367 KAVGGHKNVGEVRG-DGMLAAVEFVADKDDRVFFDASQKIGPQVATALAAS-GVIGRAMP-----QGDILGFAPPLCLTR  439 (460)
T ss_dssp             HHHTTSTTEEEEEE-ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TEECEECS-----SSCEEEECCCTTCCH
T ss_pred             HHHhcCCCeEEEee-eeEEEEEEEccCccccccccchHHHHHHHHHHHHHC-CeEEecCC-----CCCEEEEECCCCCCH
Confidence            5555553 444443 4667777775211            33556666655 99999865     25799999  56799


Q ss_pred             HHHHHHHHHHHHhC
Q 036024          259 ESILEASRRLEALF  272 (272)
Q Consensus       259 ~~i~~~l~~l~~~l  272 (272)
                      +++++++++|++++
T Consensus       440 e~i~~~l~~l~~~l  453 (460)
T 3gju_A          440 EQADIVVSKTADAV  453 (460)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998763

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.88  E-value=9.3e-22  Score=171.67  Aligned_cols=235  Identities=13%  Similarity=0.068  Sum_probs=153.5

Q ss_pred             hcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC----------CEEE
Q 036024           19 VGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG----------SIII   82 (272)
Q Consensus        19 ~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~----------~~vi   82 (272)
                      .+..| +++.+|++++ ++.+|++.     .++++++++++|+||||.+++   +++|.++|++++          +++|
T Consensus       144 ~~~~g~~v~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~li  219 (432)
T 3a9z_A          144 VEDQVAEVTFVPVSKV-NGQVEVEDILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVH  219 (432)
T ss_dssp             HHTTSCEEEEECCCTT-TSSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEE
T ss_pred             HHhcCcEEEEEecCcc-cCCcCHHHHHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEE
Confidence            34467 9999998763 23444322     257899999999999999999   677889999998          9999


Q ss_pred             EcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHH
Q 036024           83 FDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA  162 (272)
Q Consensus        83 ~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (272)
                      +|++|..+.   .+..+..+.  .+  +++.|+||.+|   .|+||++++++.....+....-...........+.+...
T Consensus       220 vDea~~~~~---~~~~~~~~~--~d--~~~~s~~K~~g---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (432)
T 3a9z_A          220 TDAAQALGK---RRVDVEDLG--VD--FLTIVGHKFYG---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPM  289 (432)
T ss_dssp             EECTTTTTT---SCCCHHHHC--CS--EEEEEGGGTTC---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHH
T ss_pred             EEchhhhCC---cccChhhcC--CC--EEEEehhHhcC---CcceEEEEccccccCCcCceeecCCccccccCCCcCHHH
Confidence            999997532   122333332  22  66899999876   459999998765111111100000000112233467777


Q ss_pred             HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEe--cC-----CCceEEEeecCC--CChHHHHHHHHHhc
Q 036024          163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVY--GG-----INAPYVWAHFPG--RKSWDVFAEILEKT  232 (272)
Q Consensus       163 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~-----~~~~~~~i~l~~--~~~~~~~~~ll~~~  232 (272)
                      +.++.+++.. ..+++++.+++++++++++.+.|+++ |+.+.  ++     ..+..+++.+++  .+..++...+   .
T Consensus       290 ~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~  365 (432)
T 3a9z_A          290 IAGLGKAADL-VSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC---Q  365 (432)
T ss_dssp             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC---S
T ss_pred             HHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh---c
Confidence            7766666652 22467889999999999999999885 65443  32     123456666653  2343443332   2


Q ss_pred             CeEeeCCCCCCCC------------------CCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024          233 HITTVPGSGFGPG------------------GEEYIRISGFG--HRESILEASRRLEAL  271 (272)
Q Consensus       233 gi~v~~g~~~~~~------------------~~~~~R~s~~~--~~~~i~~~l~~l~~~  271 (272)
                      ++.+.+|..|.+.                  ..+++|+++..  +++++++++++|+++
T Consensus       366 ~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~  424 (432)
T 3a9z_A          366 TLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQA  424 (432)
T ss_dssp             SEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence            7888777665431                  13789999754  899999999999875

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.88  E-value=2.9e-22  Score=175.35  Aligned_cols=206  Identities=14%  Similarity=0.162  Sum_probs=141.6

Q ss_pred             CCceEEEEecCCCccccCCCHH-HHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAATQN-QLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~-~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++++++++++|++|.+.+.+ .+++|.++|++||+++|+||+|.++...+...........++ ++   |+||.+| +
T Consensus       200 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~d-i~---s~sK~~~-~  274 (439)
T 3dxv_A          200 GSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPD-IL---VLGKGLG-G  274 (439)
T ss_dssp             TCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCS-EE---EECGGGG-T
T ss_pred             CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCC-EE---EEcchhc-C
Confidence            4567777777788888876544 499999999999999999999997655443233333322222 22   8999999 7


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      |+|+||++++++.        ++.+.......+. .+++++.++.++++....   ++..++++++.+++++.|.++   
T Consensus       275 G~riG~~~~~~~~--------~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~  342 (439)
T 3dxv_A          275 GLPLSAVIAPAEI--------LDCASAFAMQTLH-GNPISAAAGLAVLETIDR---DDLPAMAERKGRLLRDGLSELAKR  342 (439)
T ss_dssp             TSCCEEEEEEHHH--------HTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcceEEEEECHHH--------HhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999998877        3334333334445 788888888888763222   344556666666666666553   


Q ss_pred             -C-CeEecCCCceEEEeecC--------C-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHH
Q 036024          200 -G-IKVYGGINAPYVWAHFP--------G-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASR  266 (272)
Q Consensus       200 -g-~~~~~~~~~~~~~i~l~--------~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~  266 (272)
                       + +....+ .|.++++.+.        . ....++...++++ ||.+.|+..+    .+++|+++  ..++++++++++
T Consensus       343 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~----~~~iRi~~~~~~t~e~i~~~l~  416 (439)
T 3dxv_A          343 HPLIGDIRG-RGLACGMELVCDRQSREPARAETAKLIYRAYQL-GLVVYYVGMN----GNVLEFTPPLTITETDIHKALD  416 (439)
T ss_dssp             CTTEEEEEE-ETTEEEEEEEEETTTTEECHHHHHHHHHHHHHH-TEECEEESTT----SCEEEECCCTTCCHHHHHHHHH
T ss_pred             CCCeEEEEE-EEEEEEEEEecCccccCCCHHHHHHHHHHHHHC-CcEEeecCCC----CCEEEEECCCCCCHHHHHHHHH
Confidence             3 333443 5778888772        1 1234566677766 9999987532    47899974  568999999999


Q ss_pred             HHHHhC
Q 036024          267 RLEALF  272 (272)
Q Consensus       267 ~l~~~l  272 (272)
                      +|++++
T Consensus       417 ~l~~~l  422 (439)
T 3dxv_A          417 LLDRAF  422 (439)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998763

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.88  E-value=8.7e-22  Score=172.95  Aligned_cols=206  Identities=15%  Similarity=0.114  Sum_probs=139.8

Q ss_pred             CceEEEEecCCCccc--cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           45 RTDIIFFCSPNNPTG--HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        45 ~~~~i~~~~p~nptG--~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +..+++++.|.|++|  ...+++.+++|.++|++||+++|+||+|.++...+...........++    +.|+||.+| +
T Consensus       226 ~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd----i~t~sK~l~-~  300 (451)
T 3oks_A          226 DNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPD----LIVTAKGIA-G  300 (451)
T ss_dssp             GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS----EEEECGGGG-T
T ss_pred             CCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCC----eeeehhhhh-C
Confidence            455666667766665  344667799999999999999999999998765554333333322223    238999998 6


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh----
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS----  198 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----  198 (272)
                      |+|+||+++++++        ++.+.......+++.+++++.++.++++....   ++..++++++.+++++.|.+    
T Consensus       301 G~~iG~v~~~~~~--------~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~  369 (451)
T 3oks_A          301 GLPLSAVTGRAEI--------MDSPHVSGLGGTYGGNPIACAAALATIETIES---EGLVARAQQIEKIMKDRLGRLQAE  369 (451)
T ss_dssp             TSSCEEEEEEHHH--------HTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcceEEEEECHHH--------HhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999998887        34444444555666899999988888873222   23445555555555555554    


Q ss_pred             CC-CeEecCCCceEEEeecCC--------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHH
Q 036024          199 LG-IKVYGGINAPYVWAHFPG--------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRR  267 (272)
Q Consensus       199 ~g-~~~~~~~~~~~~~i~l~~--------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~  267 (272)
                      .+ +....+ .|.++|+.+..        ....++...++++ ||.+.|+..|    .+++|+++  ..+++++++++++
T Consensus       370 ~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~----~~~iRi~~~~~~t~e~i~~~l~~  443 (451)
T 3oks_A          370 DDRIGDVRG-RGAMIAMELVKAGTTEPDADLTKALCAGAHAA-GVIVLSCGTY----GNVVRFLPPLSIGDDLLNEGLDV  443 (451)
T ss_dssp             CTTEEEEEE-ETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHT-TEECEEECTT----SCEEEECCCTTCCHHHHHHHHHH
T ss_pred             CCCeEEEEE-eeEEEEEEEecCccCCCCHHHHHHHHHHHHhC-CcEEecCCCC----CCEEEEECCCCCCHHHHHHHHHH
Confidence            33 333333 46788887732        1134455566555 9999997654    35899974  5589999999999


Q ss_pred             HHHhC
Q 036024          268 LEALF  272 (272)
Q Consensus       268 l~~~l  272 (272)
                      |++++
T Consensus       444 l~~~l  448 (451)
T 3oks_A          444 LEEVL  448 (451)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98764

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.88  E-value=7.1e-22  Score=172.62  Aligned_cols=204  Identities=15%  Similarity=0.148  Sum_probs=136.9

Q ss_pred             CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++++++++.++|++|.+. +++.+++|.++|++||+++|+||+|.++ ..+...........++    +.|+||.+| +|
T Consensus       202 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~d----i~t~sK~~~-~G  275 (434)
T 3l44_A          202 EVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPD----LTALGKVIG-GG  275 (434)
T ss_dssp             GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCS----EEEEEGGGG-TT
T ss_pred             CEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCC----eeehhhhhc-CC
Confidence            444555555566666655 8888999999999999999999999987 4443222222322233    447999998 89


Q ss_pred             cceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh--
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS--  198 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~--  198 (272)
                      +|+||++++++.        ++.+..   .....+++.+++++.++.++++....   ++..++++++.+++++.|.+  
T Consensus       276 ~~iG~~~~~~~i--------~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~  344 (434)
T 3l44_A          276 LPIGAYGGKKEI--------MEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQA  344 (434)
T ss_dssp             SSCEEEEECHHH--------HTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCeeeEEEcHHH--------HHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHH
Confidence            999999988877        333332   22344556888999888888863222   33445556666666666654  


Q ss_pred             --CCCeEecCCCceEEEeecCCCC--------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHH
Q 036024          199 --LGIKVYGGINAPYVWAHFPGRK--------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESIL  262 (272)
Q Consensus       199 --~g~~~~~~~~~~~~~i~l~~~~--------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~  262 (272)
                        .++....+..|.++++.+....              ..++...++++ ||.+.|+.      .+.+|+++..++++++
T Consensus       345 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~------~~~~rl~~~~t~e~i~  417 (434)
T 3l44_A          345 AKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQE-GVNLAPSK------YEAWFLTTEHTKEDIE  417 (434)
T ss_dssp             HHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHT-TEECCSST------TCCEECCTTCCHHHHH
T ss_pred             HhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHC-CeEEeecC------CCcEEEecccCHHHHH
Confidence              3442222235677777764211              14456666655 99998864      3578999888999999


Q ss_pred             HHHHHHHHhC
Q 036024          263 EASRRLEALF  272 (272)
Q Consensus       263 ~~l~~l~~~l  272 (272)
                      +++++|++++
T Consensus       418 ~~l~~l~~~l  427 (434)
T 3l44_A          418 YTIEAVGRAF  427 (434)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998763

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.88  E-value=2.6e-21  Score=166.57  Aligned_cols=243  Identities=13%  Similarity=0.103  Sum_probs=162.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...++..| +++.++++++ ++.+|++.     .+++++|+   |+||||.+.+   +++|.++|++
T Consensus        79 d~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~la~~  151 (388)
T 1b9h_A           79 TEVIVPAFTFISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMAD---MDALAKISAD  151 (388)
T ss_dssp             CEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred             CEEEECCCccHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcCC---HHHHHHHHHH
Confidence            56777766555 777788888 9999999865 45556433     25667666   9999999976   8999999999


Q ss_pred             cCCEEEEcccCCcc-ccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh--
Q 036024           77 NGSIIIFDSAYAAY-VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT--  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--  153 (272)
                      +|+++|+|++|..+ .+.+  ..+..+.     .+.+.||||..+++|.|+||++++++.+..     .+.+......  
T Consensus       152 ~~~~li~D~a~~~g~~~~~--~~~~~~~-----~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~-----~~~~~~~~~~~~  219 (388)
T 1b9h_A          152 TGVPLLQDAAHAHGARWQG--KRVGELD-----SIATFSFQNGKLMTAGEGGAVVFPDGETEK-----YETAFLRHSCGR  219 (388)
T ss_dssp             HTCCBCEECTTCTTCEETT--EEGGGSS-----SCEEEECCTTSSSCSSSCEEEEECTTCHHH-----HHHHHHHTBTTC
T ss_pred             cCCEEEEecchhcCCccCC--eeccccc-----ceEEEEccCCCcccCCCeEEEEECCHHHHH-----HHHHHHHHhCCC
Confidence            99999999999853 3322  2222221     378889997666666799999998764200     1222211110  


Q ss_pred             -------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec------CCCceEEE
Q 036024          154 -------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG------GINAPYVW  213 (272)
Q Consensus       154 -------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~------~~~~~~~~  213 (272)
                                   +....+.+...++..     ..+++++..++++++++++.+.|+++ |+.+..      +..++++|
T Consensus       220 ~~~~~~~~~~~~g~~~~~~~~~~a~~~~-----~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  294 (388)
T 1b9h_A          220 PRDDRRYFHKIAGSNMRLNEFSASVLRA-----QLARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAM  294 (388)
T ss_dssp             CTTCSSCCCCSCCCBCBCBHHHHHHHHH-----HHTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEE
T ss_pred             CccCccceeecccccCCcCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEE
Confidence                         111123332222211     12445678888999999999999987 888765      34578999


Q ss_pred             eecCCC---ChHHHHHHHHHhcCeEeeCCCCCCCCC---------------------------CCeEEEEc--cC-CHHH
Q 036024          214 AHFPGR---KSWDVFAEILEKTHITTVPGSGFGPGG---------------------------EEYIRISG--FG-HRES  260 (272)
Q Consensus       214 i~l~~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~---------------------------~~~~R~s~--~~-~~~~  260 (272)
                      +.+++.   +..++...|.+ +||.+.++.......                           .+.+|+++  .. +++|
T Consensus       295 ~~~~~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~ed  373 (388)
T 1b9h_A          295 FRIPGLTEERRNALVDRLVE-AGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPE  373 (388)
T ss_dssp             EECTTCCHHHHHHHHHHHHH-TTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHH
T ss_pred             EEeCCcCcccHHHHHHHHHH-CCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHH
Confidence            999864   34556666665 599998765321000                           13589997  35 8999


Q ss_pred             HHHHHHHHHHh
Q 036024          261 ILEASRRLEAL  271 (272)
Q Consensus       261 i~~~l~~l~~~  271 (272)
                      ++++++.|+++
T Consensus       374 i~~~~~~l~~~  384 (388)
T 1b9h_A          374 LHATAEIIADA  384 (388)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999999875

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.88  E-value=7.6e-22  Score=173.41  Aligned_cols=207  Identities=15%  Similarity=0.123  Sum_probs=141.6

Q ss_pred             CCceEEEEecCCCccc--cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCSPNNPTG--HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG--~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      ++..+++++.|+|++|  ...+++.+++|.++|++||+++|+||+|.++...+...........++    +.||||.++ 
T Consensus       223 ~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pd----i~t~sK~~~-  297 (453)
T 4ffc_A          223 AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPD----IVTMAKGIA-  297 (453)
T ss_dssp             GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS----EEEECGGGG-
T ss_pred             CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcc----hHhhhhhhc-
Confidence            4556777778877777  444778899999999999999999999998765553333333322222    447899998 


Q ss_pred             CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh---
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS---  198 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---  198 (272)
                      +|+|+||+++++++        ++.+.......+++.+++++.++.++++....   ++..++++++.+++++.|.+   
T Consensus       298 ~G~~~G~~~~~~~i--------~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~  366 (453)
T 4ffc_A          298 GGMPLSAVTGRAEL--------MDAVYAGGLGGTYGGNPVTCAAAVAALGVMRE---LDLPARARAIEASVTSRLSALAE  366 (453)
T ss_dssp             TTSSCEEEEEEHHH--------HTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCeEEEEECHHH--------HhhhcccCcCCCCCcCHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHh
Confidence            59999999998887        44444444556666889999988888873222   23444555555555555544   


Q ss_pred             -CC-CeEecCCCceEEEeecCC--------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHH
Q 036024          199 -LG-IKVYGGINAPYVWAHFPG--------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASR  266 (272)
Q Consensus       199 -~g-~~~~~~~~~~~~~i~l~~--------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~  266 (272)
                       ++ +....+ .|.++|+.+..        ....++...++++ ||.+.|+..|    .+++|+++  ..++++++++++
T Consensus       367 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~----~~~iRi~~~~~~t~e~i~~~l~  440 (453)
T 4ffc_A          367 EVDIIGEVRG-RGAMLAIEIVKPGTLEPDAALTKSIAAEALSQ-GVLILTCGTF----GNVIRLLPPLVIGDDLLDEGIT  440 (453)
T ss_dssp             HCSSEEEEEE-ETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHT-TEECCEECTT----SCEEEECCCTTCCHHHHHHHHH
T ss_pred             hCCCeEEEEe-eceEEEEEEecCcccCCCHHHHHHHHHHHHhC-CCEEecCCCC----CCEEEEECCCCCCHHHHHHHHH
Confidence             33 333333 57788887732        1134455566555 9999987654    36889974  558999999999


Q ss_pred             HHHHhC
Q 036024          267 RLEALF  272 (272)
Q Consensus       267 ~l~~~l  272 (272)
                      +|++++
T Consensus       441 ~l~~~l  446 (453)
T 4ffc_A          441 ALSDII  446 (453)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998763

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.87  E-value=4.4e-21  Score=169.79  Aligned_cols=232  Identities=17%  Similarity=0.163  Sum_probs=155.4

Q ss_pred             eEEeec--CCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCC
Q 036024           25 IEYLEC--GPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGC   95 (272)
Q Consensus        25 ~~~~~~--~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~   95 (272)
                      +..++.  +++ ++.+|++++      +++|+|++ +++||+ .+++   +++|.++|+++|+++++|++|. ++...+.
T Consensus       166 ~~~v~~~~~~~-~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~  239 (483)
T 1rv3_A          166 FESMAYKVNPD-TGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGV  239 (483)
T ss_dssp             SEEEEECBCTT-TCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTS
T ss_pred             EEEEECccccC-CCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCC
Confidence            455554  544 566674441      68999999 899998 7777   8999999999999999999987 3333332


Q ss_pred             CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc-------chHHHHHhhhhh-ccCCcchHHHHHHH
Q 036024           96 PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF-------PVINDFNRIICT-CFNGASNIAQAGGL  167 (272)
Q Consensus        96 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~a~~  167 (272)
                      ......  + .  .++++|+||++  +|.|.||++++++...-...       .+...+...... ...+++...+.+..
T Consensus       240 ~~~p~~--~-~--div~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~  312 (483)
T 1rv3_A          240 VPSPFE--H-C--HVVTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVA  312 (483)
T ss_dssp             SCCGGG--T-C--SEEEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHH
T ss_pred             CCCCCC--C-C--cEEEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHH
Confidence            222111  1 1  28889999987  46788999998864210000       112233222211 12334444455545


Q ss_pred             HhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC-CceEEEeecC--CCChHHHHHHHHHhcCeEee----CCC
Q 036024          168 ACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-NAPYVWAHFP--GRKSWDVFAEILEKTHITTV----PGS  240 (272)
Q Consensus       168 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~i~l~--~~~~~~~~~~ll~~~gi~v~----~g~  240 (272)
                      .++......++++..++++++++++.+.|.++|+++..+. +..++|+.+.  +.+..+ +.++|++.||.+.    ||.
T Consensus       313 ~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g~~~~~-~~~~L~~~gI~v~~~~~pg~  391 (483)
T 1rv3_A          313 VALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGR-AEKVLEACSIACNKNTCPGD  391 (483)
T ss_dssp             HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHH-HHHHHHHTTEECEEECCSSC
T ss_pred             HHHHHHhChhHHHHHHHHHHHHHHHHHHHHhcCCEeccCCCCCceEEEeccCCCCCHHH-HHHHHHhCCcEEecCCCCCC
Confidence            5554333345688899999999999999999999987753 3467888886  334545 4556677899999    887


Q ss_pred             CCCCCCCCeEEEEccC--C----HHHHHHHHHHHHHh
Q 036024          241 GFGPGGEEYIRISGFG--H----RESILEASRRLEAL  271 (272)
Q Consensus       241 ~~~~~~~~~~R~s~~~--~----~~~i~~~l~~l~~~  271 (272)
                      .+ +-+.+++|+++..  +    ++|+++++++|+++
T Consensus       392 ~~-~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~  427 (483)
T 1rv3_A          392 KS-ALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRG  427 (483)
T ss_dssp             SC-TTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             Cc-CCCCceEEeecCCcccCCCCHHHHHHHHHHHHHH
Confidence            43 2246799999742  5    89999999998875

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.87  E-value=2.7e-20  Score=160.23  Aligned_cols=236  Identities=14%  Similarity=0.195  Sum_probs=157.5

Q ss_pred             cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..+.+. ...    .++..| +++.++.+.     ++ +++  .++++++++++|+||||.+++   +++|.++|
T Consensus        92 ~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d-----~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~  163 (386)
T 1cs1_A           92 DLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGD-----EQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLA  163 (386)
T ss_dssp             CEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTC-----HHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHH
T ss_pred             CEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCC-----HHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHH
Confidence            45666665444 222    236677 888888741     11 221  157899999999999999987   89999999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecc-cccccCCcchHHHHHhhhh
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPE-ELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~-~~~~~~~~~~~~~~~~~~~  152 (272)
                      +++|+++|+||+|..+....   ++ ..    ++.+++.|+||.+|.+|.|+ ||+++++ ++        .+.+.....
T Consensus       164 ~~~~~~li~De~~~~~~~~~---~~-~~----~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l--------~~~l~~~~~  227 (386)
T 1cs1_A          164 REVGAVSVVDNTFLSPALQN---PL-AL----GADLVLHSCTKYLNGHSDVVAGVVIAKDPDV--------VTELAWWAN  227 (386)
T ss_dssp             HHTTCEEEEECTTTCTTTCC---GG-GG----TCSEEEEETTTTTTCSSCCCCEEEEESSHHH--------HHHHHHHHH
T ss_pred             HHcCCEEEEECCCcccccCC---cc-cc----CceEEEEcCcccccCCCCceeEEEEeCcHHH--------HHHHHHHHH
Confidence            99999999999998765431   22 22    34599999999998888887 9999987 55        555555554


Q ss_pred             hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEe-cC----------------CCceEEEe
Q 036024          153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVY-GG----------------INAPYVWA  214 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~-~~----------------~~~~~~~i  214 (272)
                      ....+.+...+.++.+.++     ++.+..+...++.+.+.+.|++++ +.-. .+                ..+.++.+
T Consensus       228 ~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  302 (386)
T 1cs1_A          228 NIGVTGGAFDSYLLLRGLR-----TLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSF  302 (386)
T ss_dssp             HHTCBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEE
T ss_pred             hcCCCCCHHHHHHHHhccc-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEE
Confidence            4334466676666555543     235566778888888888888762 2211 11                12667777


Q ss_pred             ecCCCChHHHHHHHHHhcCeEeeCCCCCC-----------------C--------CCCCeEEEEccC--CHHHHHHHHHH
Q 036024          215 HFPGRKSWDVFAEILEKTHITTVPGSGFG-----------------P--------GGEEYIRISGFG--HRESILEASRR  267 (272)
Q Consensus       215 ~l~~~~~~~~~~~ll~~~gi~v~~g~~~~-----------------~--------~~~~~~R~s~~~--~~~~i~~~l~~  267 (272)
                      .+++. . +.....+++.||.+.+.+ ++                 +        ...+++|+|+..  ++++++.+.+.
T Consensus       303 ~~~~~-~-~~~~~~l~~~gi~~~~~~-~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~a  379 (386)
T 1cs1_A          303 ELDGD-E-QTLRRFLGGLSLFTLAES-LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENG  379 (386)
T ss_dssp             EESSC-H-HHHHHHHHTCSSSEEBSC-CCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred             EECCC-H-HHHHHHHHhCCcceEccc-CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHH
Confidence            77653 3 444555667799887421 11                 0        125899999743  56677777777


Q ss_pred             HHHh
Q 036024          268 LEAL  271 (272)
Q Consensus       268 l~~~  271 (272)
                      |+++
T Consensus       380 l~~~  383 (386)
T 1cs1_A          380 FRAA  383 (386)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7654

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.87  E-value=4.7e-21  Score=168.90  Aligned_cols=246  Identities=12%  Similarity=0.073  Sum_probs=163.0

Q ss_pred             cccccCccc-----chHHhcccc-ee----E-EeecCCCCCcccCCCC----C----CCceEEEEecCCCccccCCCHHH
Q 036024            6 SVIVGQAGD-----LEDEVGKYC-NI----E-YLECGPGNNFFPDLKG----T----SRTDIIFFCSPNNPTGHAATQNQ   66 (272)
Q Consensus         6 ~~~~~~~~~-----~~~~~~~~g-~~----~-~~~~~~~~~~~~dl~~----~----~~~~~i~~~~p~nptG~~~~~~~   66 (272)
                      |++..+.+.     +...++..| ++    + ..|.+  +++.+|++.    +    ++++++++++||||||.+++   
T Consensus       158 Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~--~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~---  232 (465)
T 3e9k_A          158 ILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPRE--GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFN---  232 (465)
T ss_dssp             EEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCT--TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCC---
T ss_pred             EEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCC--CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeec---
Confidence            666665543     223455567 54    2 23333  244455332    1    57899999999999999998   


Q ss_pred             HHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHH
Q 036024           67 LEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVIN  145 (272)
Q Consensus        67 l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~  145 (272)
                      +++|.++|+++|+++++|++|+...   .+..+..+.    ..+++.|++|.++ .|+ ++|+++++++......+.+..
T Consensus       233 l~~i~~la~~~g~~vi~D~a~~~g~---~~~~~~~~~----~D~~~~s~~K~l~~gp~-~~g~l~~~~~~~~~~~~~~~g  304 (465)
T 3e9k_A          233 IPAITKAGQAKGCYVGFDLAHAVGN---VELYLHDWG----VDFACWCSYKYLNAGAG-GIAGAFIHEKHAHTIKPALVG  304 (465)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTTT---SCCCHHHHT----CCEEEECSSSTTCCCTT-CCCEEEECGGGTTTSCCSSCC
T ss_pred             HHHHHHHHHHcCCEEEEEhhhhcCC---cCCchhhcC----CCEEEECcccccccCCC-ceEEEEEcHHHHhhcCCcccC
Confidence            7889999999999999999997522   122333332    2288999999993 243 689999988775432221111


Q ss_pred             HHHh-----h------------hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh----------
Q 036024          146 DFNR-----I------------ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS----------  198 (272)
Q Consensus       146 ~~~~-----~------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----------  198 (272)
                      .+..     +            ......+++.....++.+.+.......+++++++++++++++.+.|++          
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  384 (465)
T 3e9k_A          305 WFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATK  384 (465)
T ss_dssp             GGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred             ccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccC
Confidence            0000     0            001112456666665566555322234688999999999999999988          


Q ss_pred             -CCCeEecCC----CceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc---cCCHHHHHHHHHHHHH
Q 036024          199 -LGIKVYGGI----NAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG---FGHRESILEASRRLEA  270 (272)
Q Consensus       199 -~g~~~~~~~----~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~---~~~~~~i~~~l~~l~~  270 (272)
                       .|+++..+.    .+.++++.++ .+..++...|.++ ||.+...      .++++|+++   +++++|++++++.|++
T Consensus       385 ~~g~~~~~p~~~~~~g~~~~~~~~-~~~~~l~~~L~~~-Gi~v~~~------~~~~iRis~~~~~~t~edi~~~~~~l~~  456 (465)
T 3e9k_A          385 KPVVNIITPSHVEERGCQLTITFS-VPNKDVFQELEKR-GVVCDKR------NPNGIRVAPVPLYNSFHDVYKFTNLLTS  456 (465)
T ss_dssp             --CEEECSCSSGGGBCSCEEEEEC-CTTCCHHHHHHTT-TEECEEE------TTTEEEEBCCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCeEEeCCCCHhhcccEEEEEec-CCHHHHHHHHHHC-CEEEecC------CCCEEEEeCcccCCCHHHHHHHHHHHHH
Confidence             588888765    2778888887 3445667776665 9998632      258999985   4589999999999987


Q ss_pred             hC
Q 036024          271 LF  272 (272)
Q Consensus       271 ~l  272 (272)
                      ++
T Consensus       457 ~l  458 (465)
T 3e9k_A          457 IL  458 (465)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.87  E-value=1.8e-21  Score=171.14  Aligned_cols=204  Identities=11%  Similarity=0.021  Sum_probs=148.6

Q ss_pred             CCceEEEEec-CCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCS-PNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~-p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      ++++++++.. ++||+|.++ +++.+++|.++|++||+++|+||+|.++...+...........++ ++   |+||.++ 
T Consensus       232 ~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pd-ii---t~sK~l~-  306 (457)
T 3tfu_A          232 GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPD-IM---CVGKALT-  306 (457)
T ss_dssp             GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS-EE---EECGGGG-
T ss_pred             CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCce-EE---EEChhhh-
Confidence            4567777777 799999877 778899999999999999999999998765554333333333333 22   8999997 


Q ss_pred             Cc-cceeEEEecccccccCCcchHHHHHh-----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024          122 TG-VRLGWTVVPEELLFSSGFPVINDFNR-----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT  195 (272)
Q Consensus       122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  195 (272)
                      .| +|+||++++++.        .+.+..     +....+++.+++++.++.+.++....   +...++++++.+++++.
T Consensus       307 gG~~~lG~v~~~~~i--------~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~---~~~~~~~~~~~~~l~~~  375 (457)
T 3tfu_A          307 GGYLSLAATLCTADV--------AHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG---QDWRTRITELAAGLTAG  375 (457)
T ss_dssp             TTSSCCEEEEEEHHH--------HHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT---SCHHHHHHHHHHHHHHH
T ss_pred             CCCcceEEEEEcHHH--------HHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHH
Confidence            56 699999999888        555531     13335556888999888888863211   24567777888888888


Q ss_pred             HHhC----CCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHH
Q 036024          196 LASL----GIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRL  268 (272)
Q Consensus       196 L~~~----g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l  268 (272)
                      |+++    ++....+ .|.++++.++. .+..++...++++ ||.+.|.       .+++|++  +..+++++++++++|
T Consensus       376 L~~l~~~~~v~~vr~-~G~~~~i~l~~~~~~~~~~~~l~~~-Gv~v~~~-------~~~lRi~p~~~~t~eei~~~l~~L  446 (457)
T 3tfu_A          376 LDTARALPAVTDVRV-CGAIGVIECDRPVDLAVATPAALDR-GVWLRPF-------RNLVYAMPPYICTPAEITQITSAM  446 (457)
T ss_dssp             HGGGGGSTTEEEEEE-CSSCEEEEESSCCCHHHHHHHHHHT-TEECCCB-------TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred             HHHHhcCCCeeeeec-CCeEEEEEECCcccHHHHHHHHHHC-CeEEEec-------CCEEEEECCCCCCHHHHHHHHHHH
Confidence            8765    3333333 57788888874 3456777777766 9999873       2589998  456999999999999


Q ss_pred             HHhC
Q 036024          269 EALF  272 (272)
Q Consensus       269 ~~~l  272 (272)
                      ++++
T Consensus       447 ~~~l  450 (457)
T 3tfu_A          447 VEVA  450 (457)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.87  E-value=2.7e-21  Score=169.69  Aligned_cols=203  Identities=15%  Similarity=0.081  Sum_probs=138.2

Q ss_pred             CceEEEEecCC-Cccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           45 RTDIIFFCSPN-NPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        45 ~~~~i~~~~p~-nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++|++..++ |++| .+++++.+++|.++|++||+++|+||+|.++...+...........++    +.++||.++ +
T Consensus       210 ~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~d----i~t~sK~l~-~  284 (448)
T 3dod_A          210 EIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPD----LMAAGKGIT-G  284 (448)
T ss_dssp             GEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS----EEEECGGGG-T
T ss_pred             CEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCC----EEEeccccc-C
Confidence            45556665555 7887 556778899999999999999999999998765554332333322223    337899998 6


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID  194 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  194 (272)
                      | +|+||+++++++        ++.+..       .....+++.+++++.++.++++....   ++..++++++.+++++
T Consensus       285 G~~~ig~v~~~~~~--------~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~  353 (448)
T 3dod_A          285 GYLPIAVTFATEDI--------YKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFES---ENIVEQVAEKSKKLHF  353 (448)
T ss_dssp             TSSCCEEEEEEHHH--------HHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred             CcCceEEEEECHHH--------HHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHH
Confidence            9 599999999887        444443       33445556788999988888873222   2334455555555555


Q ss_pred             HHHh---CC-CeEecCCCceEEEeecCCCC------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccC
Q 036024          195 TLAS---LG-IKVYGGINAPYVWAHFPGRK------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFG  256 (272)
Q Consensus       195 ~L~~---~g-~~~~~~~~~~~~~i~l~~~~------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~  256 (272)
                      .|.+   .+ +.... ..|.++|+.++...            ..++...++++ ||.+.|+       .+++|++  +..
T Consensus       354 ~l~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-------~~~iRi~~~~~~  424 (448)
T 3dod_A          354 LLQDLHALPHVGDIR-QLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMREL-GMLTRPL-------GDVIAFLPPLAS  424 (448)
T ss_dssp             HHHHHTTSTTEEEEE-EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TEECCEE-------TTEEEECCCTTC
T ss_pred             HHHHHhcCCCeEEEE-eeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHC-CcEEecc-------CCEEEEECCCCC
Confidence            5544   33 22233 25678888886321            25667777766 9999876       2689995  567


Q ss_pred             CHHHHHHHHHHHHHhC
Q 036024          257 HRESILEASRRLEALF  272 (272)
Q Consensus       257 ~~~~i~~~l~~l~~~l  272 (272)
                      +++++++++++|++++
T Consensus       425 t~e~i~~~l~~l~~~l  440 (448)
T 3dod_A          425 TAEELSEMVAIMKQAI  440 (448)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            9999999999998763

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.87  E-value=7.2e-21  Score=163.94  Aligned_cols=237  Identities=15%  Similarity=0.089  Sum_probs=160.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...++..| +++.++++++ ++.+|++.     .+++++++++   ||||...+   +++|.++|++
T Consensus        80 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~---~~~i~~l~~~  152 (393)
T 1mdo_A           80 DEVITPSMTWVSTLNMIVLLGANPVMVDVDRD-TLMVTPEHIEAAITPQTKAIIPV---HYAGAPAD---LDAIYALGER  152 (393)
T ss_dssp             CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC---HHHHHHHHHH
T ss_pred             CEEEeCCCccHhHHHHHHHCCCEEEEEeccCC-cCCCCHHHHHHhcCCCceEEEEe---CCCCCcCC---HHHHHHHHHH
Confidence            56677666555 777778888 9999999865 55566433     2578888875   48999876   8999999999


Q ss_pred             cCCEEEEcccCCcc-ccCCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEec-ccccccCCcchHHHHHhhhh
Q 036024           77 NGSIIIFDSAYAAY-VTDGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        77 ~~~~vi~D~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~  152 (272)
                      +|+++|+|++|..+ .+.+.  +   +. .  ..+++.|+|  |.++  |.|+||++.+ +++        .+.+.....
T Consensus       153 ~~~~li~D~a~~~g~~~~~~--~---~~-~--~d~~~~S~~k~K~l~--~~~~g~~~~~~~~~--------~~~l~~~~~  214 (393)
T 1mdo_A          153 YGIPVIEDAAHATGTSYKGR--H---IG-A--RGTAIFSFHAIKNIT--CAEGGIVVTDNPQF--------ADKLRSLKF  214 (393)
T ss_dssp             HTCCBCEECTTCTTCEETTE--E---TT-S--SSEEEEECCTTSSSC--SSSCEEEEESCHHH--------HHHHHHHTB
T ss_pred             cCCeEEEECccccCCeECCe--e---cC-C--CCeEEEeCCCCCccc--cccceEEEeCCHHH--------HHHHHHHHh
Confidence            99999999999853 33321  1   11 1  348899999  6664  4589999987 455        333333221


Q ss_pred             hcc------------------------CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-C-
Q 036024          153 TCF------------------------NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG-G-  206 (272)
Q Consensus       153 ~~~------------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~-  206 (272)
                      ...                        ...+.+...++...+     +.+++..++.+++++++.+.|.++++++.. + 
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l-----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  289 (393)
T 1mdo_A          215 HGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQL-----QKLDALNARRAAIAAQYHQAMADLPFQPLSLPS  289 (393)
T ss_dssp             TTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCS
T ss_pred             cCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcCCcccccCCC
Confidence            110                        112333333222222     234566777778899999999988877653 2 


Q ss_pred             ----CCceEEEeecC----CCChHHHHHHHHHhcCeEeeCCCCCC---------------CC----CCCeEEEEcc--CC
Q 036024          207 ----INAPYVWAHFP----GRKSWDVFAEILEKTHITTVPGSGFG---------------PG----GEEYIRISGF--GH  257 (272)
Q Consensus       207 ----~~~~~~~i~l~----~~~~~~~~~~ll~~~gi~v~~g~~~~---------------~~----~~~~~R~s~~--~~  257 (272)
                          ..++++|+.++    +.+..++...|.+ +||.+.+|..+.               +.    ..+.+|+++.  .+
T Consensus       290 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t  368 (393)
T 1mdo_A          290 WEHIHAWHLFIIRVDEARCGITRDALMASLKT-KGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMT  368 (393)
T ss_dssp             SCEECCCSCEEEECCHHHHSSCHHHHHHHHHH-TTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCC
T ss_pred             CCCCceeEEEEEEecccccccCHHHHHHHHHh-CCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCC
Confidence                34567899987    4566666666665 599999887541               00    1347999975  59


Q ss_pred             HHHHHHHHHHHHHh
Q 036024          258 RESILEASRRLEAL  271 (272)
Q Consensus       258 ~~~i~~~l~~l~~~  271 (272)
                      ++|+++++++|+++
T Consensus       369 ~~~i~~~~~~l~~~  382 (393)
T 1mdo_A          369 ESDFDRVITALHQI  382 (393)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999875

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.86  E-value=1.7e-21  Score=169.82  Aligned_cols=204  Identities=16%  Similarity=0.143  Sum_probs=138.3

Q ss_pred             CceEEEEecCCCccccCCC-HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAAT-QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++++++++.++|++|.+.+ ++.+++|.++|++||+++|+||+|.++ ..+...........++    +.|+||.+| +|
T Consensus       199 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~d----i~t~sK~~~-~G  272 (427)
T 3fq8_A          199 EIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGVTPD----LTTLGKIIG-GG  272 (427)
T ss_dssp             TEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTCCCS----EEEECGGGG-TT
T ss_pred             CEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCCCCC----hhhhhhhhh-CC
Confidence            5677777777788887766 555999999999999999999999987 4442222222222222    458899999 89


Q ss_pred             cceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh--
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS--  198 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~--  198 (272)
                      +|+||++++++.+        +.+..   .....+.+.+++++.++.++++....   ++..++++++.+++++.|.+  
T Consensus       273 ~~~G~~~~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~  341 (427)
T 3fq8_A          273 LPVGAYGGKREIM--------QLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLAIA  341 (427)
T ss_dssp             SSCEEEEECHHHH--------TTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEEcHHHH--------HhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999988773        33332   12334445688888888888863221   23455566666666666654  


Q ss_pred             --CCCeEecCCCceEEEeecCCC--C------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHH
Q 036024          199 --LGIKVYGGINAPYVWAHFPGR--K------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESIL  262 (272)
Q Consensus       199 --~g~~~~~~~~~~~~~i~l~~~--~------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~  262 (272)
                        .++.......+.++|+.+...  .            ..++...++++ ||.+.|+.      ...+|+++..++++++
T Consensus       342 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gi~v~~~~------~~r~~~~~~~t~e~i~  414 (427)
T 3fq8_A          342 QETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQ-GIYLAPSQ------FEAGFTSLAHTEEDID  414 (427)
T ss_dssp             HHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSST------TSCEECCTTCCHHHHH
T ss_pred             HhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHC-CcEEecCC------CCCEEeeCcCCHHHHH
Confidence              344333334577888888632  1            23566666655 99998865      2357777778999999


Q ss_pred             HHHHHHHHhC
Q 036024          263 EASRRLEALF  272 (272)
Q Consensus       263 ~~l~~l~~~l  272 (272)
                      +++++|++++
T Consensus       415 ~~l~~l~~~l  424 (427)
T 3fq8_A          415 ATLAAARTVM  424 (427)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998763

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.86  E-value=6.9e-21  Score=164.30  Aligned_cols=241  Identities=13%  Similarity=0.092  Sum_probs=155.0

Q ss_pred             cccccccCccc-c-h---HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-L-E---DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~-~---~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. . .   ..++..| +++.+|.+. ..+.--++  +++++|++++|+||||.+++   +++|+++|+++
T Consensus        94 d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~l~~~i~--~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~  167 (393)
T 1n8p_A           94 SHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-NDLPQLIK--ENTKLVWIETPTNPTLKVTD---IQKVADLIKKH  167 (393)
T ss_dssp             CEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HHHHHHSC--SSEEEEEECSSCTTTCCCCC---HHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HHHHHhcc--cCceEEEEECCCCCcceecC---HHHHHHHHHHh
Confidence            55666665443 1 1   2456678 999998752 11111122  57899999999999999997   89999999999


Q ss_pred             ----CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEec-ccccccCCcchHHHHHhhh
Q 036024           78 ----GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVP-EELLFSSGFPVINDFNRII  151 (272)
Q Consensus        78 ----~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~-~~~~~~~~~~~~~~~~~~~  151 (272)
                          |+++|+|++|..+...    .+..+    +..+++.|+||.+|.+|+|+ ||++++ +++        .+.+....
T Consensus       168 ~~~~~~~livD~a~~~~~~~----~~~~~----~~di~~~S~sK~~g~~G~rigG~~~~~~~~~--------~~~l~~~~  231 (393)
T 1n8p_A          168 AAGQDVILVVDNTFLSPYIS----NPLNF----GADIVVHSATKYINGHSDVVLGVLATNNKPL--------YERLQFLQ  231 (393)
T ss_dssp             TTTTTCEEEEECTTTHHHHC----CGGGG----TCSEEEEETTTTTTCSSCCCCEEEEESCHHH--------HHHHHHHH
T ss_pred             CCCCCCEEEEeCCccccccC----CHHHc----CCeEEEEECcccccCCCCceeEEEEeCCHHH--------HHHHHHHH
Confidence                9999999999976653    12222    23499999999999889999 999885 455        45555444


Q ss_pred             hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--Ce-EecC----------------C-C-ce
Q 036024          152 CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG--IK-VYGG----------------I-N-AP  210 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~~~----------------~-~-~~  210 (272)
                      .......+.....++...++     .+....++..++.+.+.+.|.+.+  +. +..+                . . +.
T Consensus       232 ~~~g~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~  306 (393)
T 1n8p_A          232 NAIGAIPSPFDAWLTHRGLK-----TLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGG  306 (393)
T ss_dssp             HHHCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCS
T ss_pred             HhcCCCCCHHHHHHHHhccc-----hHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCcc
Confidence            33333345555544444443     235566777788888888888763  32 2111                1 2 66


Q ss_pred             EEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCC-------C--------------CCCCeEEEEcc--CCHHHHHHHHH
Q 036024          211 YVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFG-------P--------------GGEEYIRISGF--GHRESILEASR  266 (272)
Q Consensus       211 ~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~-------~--------------~~~~~~R~s~~--~~~~~i~~~l~  266 (272)
                      ++++.+++. ...+.+...++..++.+..|+.+.       +              ...+.+|+|++  +++++++.+.+
T Consensus       307 i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~  386 (393)
T 1n8p_A          307 MISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQ  386 (393)
T ss_dssp             EEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHH
Confidence            888999752 112222222333355655554322       0              11478999974  46777888888


Q ss_pred             HHHHh
Q 036024          267 RLEAL  271 (272)
Q Consensus       267 ~l~~~  271 (272)
                      +|+++
T Consensus       387 al~~~  391 (393)
T 1n8p_A          387 ALKQA  391 (393)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            87764

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.86  E-value=1e-20  Score=164.17  Aligned_cols=241  Identities=15%  Similarity=0.114  Sum_probs=153.9

Q ss_pred             cccccccCccc-chHHhc----ccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVG----KYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~----~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. +...+.    ..| +++.++.+.-..+.--+  .+++++|++++|+||||.+.+   +++|+++|+++
T Consensus       121 d~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai--~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~  195 (414)
T 3ndn_A          121 DRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERAL--SVPTQAVFFETPSNPMQSLVD---IAAVTELAHAA  195 (414)
T ss_dssp             CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHT--SSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHT
T ss_pred             CEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhc--CCCCeEEEEECCCCCCCcccc---HHHHHHHHHHc
Confidence            56666665554 444443    378 99999886111111102  267899999999999999977   88999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++|+|++|.......   ++ ..    +..+++.|+||.+|.+| +++|+++++++.+.       ..+.........
T Consensus       196 g~~livDe~~~~~~~~~---~~-~~----g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~-------~~l~~~~~~~g~  260 (414)
T 3ndn_A          196 GAKVVLDNVFATPLLQQ---GF-PL----GVDVVVYSGTKHIDGQGRVLGGAILGDREYID-------GPVQKLMRHTGP  260 (414)
T ss_dssp             TCEEEEECTTTHHHHCC---CG-GG----TCSEEEEETTTTTTCSSCCCCEEEEECHHHHT-------THHHHHHHHHCC
T ss_pred             CCEEEEECCCcccccCC---ch-hc----CCCeEeccCCccccCCCCceEEEEEECHHHHH-------HHHHHHHHHcCC
Confidence            99999999998433221   12 22    12388999999998768 89999999887732       133333333333


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecCC----------------CceEEEeecCC
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGGI----------------NAPYVWAHFPG  218 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~i~l~~  218 (272)
                      ..+.....++...+     +.+..+.++..++++.+.+.|++. ++. +..|.                .|.++++.+++
T Consensus       261 ~~~~~~a~~~~~~l-----~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~  335 (414)
T 3ndn_A          261 AMSAFNAWVLLKGL-----ETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDC  335 (414)
T ss_dssp             CCCHHHHHHHHHHG-----GGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECS
T ss_pred             CCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcC
Confidence            34444433333332     334566778889999999999886 433 32221                46789999975


Q ss_pred             C-----ChHHHHHHHHHhcCeEeeCCCCCCC---------------------CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          219 R-----KSWDVFAEILEKTHITTVPGSGFGP---------------------GGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       219 ~-----~~~~~~~~ll~~~gi~v~~g~~~~~---------------------~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      .     .....+...++..++.+..|..++.                     ..++.+|+|+..  |+.+.+++.|+++
T Consensus       336 ~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~a  412 (414)
T 3ndn_A          336 PEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRA  412 (414)
T ss_dssp             CGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHH
T ss_pred             CccccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHh
Confidence            2     1223333444555788887775531                     136789999864  3344445555544

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.86  E-value=9.3e-22  Score=171.90  Aligned_cols=204  Identities=17%  Similarity=0.159  Sum_probs=139.9

Q ss_pred             CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++++|+++..+||||.++ +++.+++|.++|++||+++|+||+|.++ ..+...........++    +.|+||.+| +|
T Consensus       203 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d----i~s~sK~l~-~G  276 (434)
T 2epj_A          203 RIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNIEGD----IIVLGKIIG-GG  276 (434)
T ss_dssp             GEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTCCCS----EEEEEGGGG-TT
T ss_pred             CEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCCCCC----eeeecchhc-CC
Confidence            555665555567899876 6999999999999999999999999976 3232111112221223    348999998 59


Q ss_pred             cceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-  199 (272)
                      +|+||++++++.+        +.+..   .....+++.+++++.++.++++....   ++..++++++.+++++.|+++ 
T Consensus       277 ~~~G~v~~~~~~~--------~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~  345 (434)
T 2epj_A          277 FPVGAVAGSREVM--------SLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAASEVL  345 (434)
T ss_dssp             SSCEEEEECHHHH--------TTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceeeeeecHHHH--------HhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998773        33322   11223445788888888777763221   345677778888888888764 


Q ss_pred             ---CCeEecCCCceEEEeecCCC--------------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHH
Q 036024          200 ---GIKVYGGINAPYVWAHFPGR--------------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESIL  262 (272)
Q Consensus       200 ---g~~~~~~~~~~~~~i~l~~~--------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~  262 (272)
                         ++....+..|.++|+.++..              ...++...|+++ ||.+.|+.      ...+|+++..++++++
T Consensus       346 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~------~~~~~~~~~~t~e~i~  418 (434)
T 2epj_A          346 DRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRR-GVFIAPSN------LEAVFTGLPHQGEALE  418 (434)
T ss_dssp             HHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHT-TEECCSST------TSCEECCTTCSHHHHH
T ss_pred             hhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHC-CeEEeccC------CCcEEEeccCCHHHHH
Confidence               55322223577889988641              134566666654 99999875      2357888878999999


Q ss_pred             HHHHHHHHhC
Q 036024          263 EASRRLEALF  272 (272)
Q Consensus       263 ~~l~~l~~~l  272 (272)
                      +++++|++++
T Consensus       419 ~~l~~l~~~l  428 (434)
T 2epj_A          419 IAVEGLRSSL  428 (434)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998753

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.86  E-value=3.1e-21  Score=165.73  Aligned_cols=217  Identities=12%  Similarity=0.085  Sum_probs=148.0

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++++++++++++||||.+++.+++++|.++|+++|+++|+|+++.    ++.+..+..+.    ..+++.|++|.++ .+
T Consensus       134 ~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~----g~~~~~~~~~~----~d~~~~s~~K~l~-~~  204 (379)
T 3ke3_A          134 DKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS----GCVWLDMKELG----IDVLISAPQKGWS-ST  204 (379)
T ss_dssp             HTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC----TTCCCCHHHHT----CSEEEECTTTTTC-SC
T ss_pred             cCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc----CCccccccccC----CCEEEecchhhcC-CC
Confidence            478999999999999999999999999999999999999999976    22233333332    1288899999886 33


Q ss_pred             cceeEEEecccccccCCc----ch-H--HHHH----hhhh---hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHH
Q 036024          124 VRLGWTVVPEELLFSSGF----PV-I--NDFN----RIIC---TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENT  189 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~----~~-~--~~~~----~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  189 (272)
                      ..+|+++++++.......    .. .  ..+.    .+..   ....+++...+.++.++++......++++++++++++
T Consensus       205 ~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~  284 (379)
T 3ke3_A          205 PCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELG  284 (379)
T ss_dssp             CCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             CceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Confidence            458999998876321000    00 0  0010    0111   1123567777777767766333334688899999999


Q ss_pred             HHHHHHHHhCCCeEecCCC--ce-EEEeecCCCChHHHHHHHHHhcCeEeeCCCCCC---CCCCCeEEEEc--cCCHHHH
Q 036024          190 KILIDTLASLGIKVYGGIN--AP-YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFG---PGGEEYIRISG--FGHRESI  261 (272)
Q Consensus       190 ~~l~~~L~~~g~~~~~~~~--~~-~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~~~~R~s~--~~~~~~i  261 (272)
                      +++++.|+++|+++..+..  +. ...+..++ ..... ...++++||.+.+|..+.   +.+.+.+|+++  .++++|+
T Consensus       285 ~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~-~~~~~-~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di  362 (379)
T 3ke3_A          285 NRVRKVLTDKGIESVAAEGFEAPGVVVSYTER-DDMHK-GSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDI  362 (379)
T ss_dssp             HHHHHHHHHTTCCBSBCTTCBCSSEEEEECSC-HHHHS-SHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCH
T ss_pred             HHHHHHHHHcCCEecCCccccCceEEEEccCC-cchHH-HHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHH
Confidence            9999999999988876532  22 33334432 11122 344556699999998664   23367899996  3588999


Q ss_pred             HHHHHHHHHh
Q 036024          262 LEASRRLEAL  271 (272)
Q Consensus       262 ~~~l~~l~~~  271 (272)
                      ++++++|+++
T Consensus       363 ~~~~~~l~~~  372 (379)
T 3ke3_A          363 DGTVERFEKA  372 (379)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998875

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.86  E-value=2.2e-20  Score=163.13  Aligned_cols=237  Identities=15%  Similarity=0.126  Sum_probs=153.7

Q ss_pred             cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccC-CCC--CCCc-eEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRT-DIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~-~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..+.+. ...    .++..| +++.++.+.     ++ +++  .+++ ++|++++|+||||.+.+   +++|+++
T Consensus       154 d~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-----~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~l  225 (445)
T 1qgn_A          154 GHIVTTTDCYRKTRIFIETILPKMGITATVIDPAD-----VGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKL  225 (445)
T ss_dssp             CEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSC-----HHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHH
T ss_pred             CEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCC-----HHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHH
Confidence            55666665444 333    356678 888888751     11 222  1567 99999999999999987   8899999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhh
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  152 (272)
                      |+++|+++|+|++|......   .+ ..+    +..+++.|+||.+|..| .++||+++++++        ++.+.....
T Consensus       226 a~~~g~~livD~a~~~~~~~---~~-~~~----g~Div~~S~sK~~gg~gd~~~G~l~~~~~l--------~~~l~~~~~  289 (445)
T 1qgn_A          226 CHEKGALVCIDGTFATPLNQ---KA-LAL----GADLVLHSATKFLGGHNDVLAGCISGPLKL--------VSEIRNLHH  289 (445)
T ss_dssp             HHHTTCEEEEECTTTCTTTC---CT-TTT----TCSEEEECTTTTTTCSSSCCCEEEEECHHH--------HHHHHHHHH
T ss_pred             HHHcCCEEEEECCCcccccC---Cc-ccc----CCEEEEECCcccccccccceEEEEEECHHH--------HHHHHHHHH
Confidence            99999999999999854321   11 122    22389999999998444 479999998876        455544443


Q ss_pred             hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eEecC----------------CCceEEEe
Q 036024          153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GI-KVYGG----------------INAPYVWA  214 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~----------------~~~~~~~i  214 (272)
                      ......+.....++.+.++     .+..+.++..++++.+.+.|+++ ++ .+..|                ..+.++++
T Consensus       290 ~~g~~~~~~~a~~~~~~l~-----~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf  364 (445)
T 1qgn_A          290 ILGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSF  364 (445)
T ss_dssp             HHCCCCCHHHHHHHHHHGG-----GHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEE
T ss_pred             HhCCCCCHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEE
Confidence            3333344444343333333     33455667778889999999887 45 44433                14678889


Q ss_pred             ecCCC-ChHHHHHHHHHhcCeEeeCCCCCCC---------------------CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          215 HFPGR-KSWDVFAEILEKTHITTVPGSGFGP---------------------GGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       215 ~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~---------------------~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      .+++. ...+.+...++..++.+..|+.+..                     ...+.+|+|+.  .||++.+++.|+++
T Consensus       365 ~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG--~Edid~li~~L~~a  441 (445)
T 1qgn_A          365 EVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG--VEDFDDLKADILQA  441 (445)
T ss_dssp             EESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC--SSCHHHHHHHHHHH
T ss_pred             EECCCHHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec--cCCHHHHHHHHHHH
Confidence            99752 1122222223334788888876531                     12479999986  44677777777665

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.86  E-value=3.5e-21  Score=168.97  Aligned_cols=204  Identities=13%  Similarity=0.124  Sum_probs=142.0

Q ss_pred             CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++++++++..+||||. ..+++.+++|.++|++||+++|+||+|.++...+...........++  ++  |+||.++ +|
T Consensus       219 ~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d--i~--s~sK~l~-~G  293 (449)
T 3a8u_X          219 NIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPD--LM--CIAKQVT-NG  293 (449)
T ss_dssp             GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCS--EE--EECGGGG-TT
T ss_pred             CEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCC--EE--EEccccc-CC
Confidence            4555554444678996 56789999999999999999999999986654443222222222223  22  8899998 68


Q ss_pred             -cceeEEEecccccccCCcchHHHHHhh---------hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024          124 -VRLGWTVVPEELLFSSGFPVINDFNRI---------ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILI  193 (272)
Q Consensus       124 -~r~G~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  193 (272)
                       +|+||+++++++        ++.+...         ....+.+.+.+++.++.++++....   ++..++++++.++++
T Consensus       294 ~~~~G~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~l~  362 (449)
T 3a8u_X          294 AIPMGAVIASTEI--------YQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK---ENLVQSVAEVAPHFE  362 (449)
T ss_dssp             SSCCEEEEEEHHH--------HHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHH
T ss_pred             CCceEEEEECHHH--------HHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHH
Confidence             999999998876        4555432         1223445788888888877763221   246678888888999


Q ss_pred             HHHHhCC-CeEe--cCCCceEEEeecCCCC------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHH
Q 036024          194 DTLASLG-IKVY--GGINAPYVWAHFPGRK------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESIL  262 (272)
Q Consensus       194 ~~L~~~g-~~~~--~~~~~~~~~i~l~~~~------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~  262 (272)
                      +.|++++ +...  .+..|.++|+.++...      ..++...|+++ ||.+.|+      + +++|++  +..++++++
T Consensus       363 ~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~------g-~~iRis~~~~~t~~~i~  434 (449)
T 3a8u_X          363 KALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKA-GFYVRFG------G-DTLQFGPTFNSKPQDLD  434 (449)
T ss_dssp             HHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHH-TEECEEE------T-TEEEECCCTTCCHHHHH
T ss_pred             HHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHC-CcEEecC------C-CEEEEECCCcCCHHHHH
Confidence            9888752 2211  1235788999997421      12567777765 9999986      1 689999  567999999


Q ss_pred             HHHHHHHHhC
Q 036024          263 EASRRLEALF  272 (272)
Q Consensus       263 ~~l~~l~~~l  272 (272)
                      +++++|++++
T Consensus       435 ~~l~~l~~~l  444 (449)
T 3a8u_X          435 RLFDAVGEVL  444 (449)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998753

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.86  E-value=5.6e-21  Score=168.16  Aligned_cols=203  Identities=8%  Similarity=-0.033  Sum_probs=136.0

Q ss_pred             ceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcc
Q 036024           46 TDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV  124 (272)
Q Consensus        46 ~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~  124 (272)
                      ++++++..++|++|. .++++.+++|.++|++||+++|+||+|.++...+...........++    +.++||.++.+|+
T Consensus       220 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pd----i~t~sK~l~gg~~  295 (459)
T 4a6r_A          220 VAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPD----LFTAAKGLSSGYL  295 (459)
T ss_dssp             EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCS----EEEECGGGGTTSS
T ss_pred             EEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCC----eeehhhhhcCCCC
Confidence            344444444555565 45889999999999999999999999998765553332333332333    2368999984449


Q ss_pred             ceeEEEecccccccCCcchHHHHH---hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHH-HHHHHHHHHH----
Q 036024          125 RLGWTVVPEELLFSSGFPVINDFN---RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYK-ENTKILIDTL----  196 (272)
Q Consensus       125 r~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~L----  196 (272)
                      |+||++++++.        ++.+.   ......+++.+++++.|+.++++....   +...++++ ++.+++++.|    
T Consensus       296 ~lg~v~~~~~i--------~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~~l~~~l  364 (459)
T 4a6r_A          296 PIGAVFVGKRV--------AEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRD---EGIVQRVKDDIGPYMQKRWRETF  364 (459)
T ss_dssp             CCEEEEECHHH--------HHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHH---TCHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CccceeeCHHH--------HHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999887        55555   334444556888999999888873222   22334444 4444444444    


Q ss_pred             HhC-CCeEecCCCceEEEeecCCC-C-----------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHH
Q 036024          197 ASL-GIKVYGGINAPYVWAHFPGR-K-----------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESI  261 (272)
Q Consensus       197 ~~~-g~~~~~~~~~~~~~i~l~~~-~-----------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i  261 (272)
                      .+. .+....+ .|.++++.+... .           ..++...++++ ||.+.|+.       +++|++  +..+++++
T Consensus       365 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~g-------~~iRi~~~~~~t~e~i  435 (459)
T 4a6r_A          365 SRFEHVDDVRG-VGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRN-NLIMRACG-------DHIVSAPPLVMTRAEV  435 (459)
T ss_dssp             TTCTTEEEEEE-ETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHT-TEECEEET-------TEEEECCCTTCCHHHH
T ss_pred             hcCCCeEEEEE-EEEEEEEEEecCccccccccchHHHHHHHHHHHHHC-CeEEecCC-------CEEEEECCCCCCHHHH
Confidence            444 3444444 466777777521 1           34566666666 99999862       689999  56799999


Q ss_pred             HHHHHHHHHhC
Q 036024          262 LEASRRLEALF  272 (272)
Q Consensus       262 ~~~l~~l~~~l  272 (272)
                      ++++++|++++
T Consensus       436 ~~~l~~l~~~l  446 (459)
T 4a6r_A          436 DEMLAVAERCL  446 (459)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998763

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.86  E-value=1.2e-20  Score=163.09  Aligned_cols=239  Identities=19%  Similarity=0.102  Sum_probs=158.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...++..| +++.++++++ ++.+|++.     .+++++++   |+||||.+.+   +++|.++|++
T Consensus       104 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~l~~~  176 (399)
T 2oga_A          104 DEVIVPSHTYIASWLAVSATGATPVPVEPHED-HPTLDPLLVEKAITPRTRALL---PVHLYGHPAD---MDALRELADR  176 (399)
T ss_dssp             CEEEEESSSCTHHHHHHHHTTCEEEEECBCSS-SSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred             CEEEECCCccHHHHHHHHHCCCEEEEEecCCC-CCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC---HHHHHHHHHH
Confidence            56677666555 777788888 9999999764 45556433     24677766   5789999977   8999999999


Q ss_pred             cCCEEEEcccCCccc-cCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEec-ccccccCCcchHHHHHhhhh
Q 036024           77 NGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~  152 (272)
                      +|+++|+|++|..+. +++  ..+..+   .  .+++.|+  ||.+|.+| |.||++.+ +++        .+.+.....
T Consensus       177 ~~~~li~Dea~~~g~~~~~--~~~~~~---~--di~~~S~~~sK~~~~~G-~~g~~~~~~~~~--------~~~l~~~~~  240 (399)
T 2oga_A          177 HGLHIVEDAAQAHGARYRG--RRIGAG---S--SVAAFSFYPGKNLGCFG-DGGAVVTGDPEL--------AERLRMLRN  240 (399)
T ss_dssp             HTCEECEECTTCTTCEETT--EETTCT---T--CEEEEECCTTSSSCCSS-CCEEEEESCHHH--------HHHHHHHHB
T ss_pred             cCCEEEEECcccccCccCC--eecccc---c--CEEEEeCCCCccCCcCC-ceEEEEeCCHHH--------HHHHHHHHh
Confidence            999999999998653 222  111111   1  2888888  79999668 99999987 454        444443332


Q ss_pred             hc------------cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec-CCCceEEEe--ec
Q 036024          153 TC------------FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG-GINAPYVWA--HF  216 (272)
Q Consensus       153 ~~------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~i--~l  216 (272)
                      ..            ....+.+...++.+.++     ++++..++.+++.+++.+.|+++ |+++.. +..+.++|+  .+
T Consensus       241 ~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~  315 (399)
T 2oga_A          241 YGSRQKYSHETKGTNSRLDEMQAAVLRIRLA-----HLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTV  315 (399)
T ss_dssp             TTCSSTTCCCSCCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEE
T ss_pred             cCccccccccccccCCCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEE
Confidence            11            12345555555544443     23445667777888999999887 777653 344555553  33


Q ss_pred             CCCChHHHHHHHHHhcCeEeeCCCCCCCC--------C-------------CCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          217 PGRKSWDVFAEILEKTHITTVPGSGFGPG--------G-------------EEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       217 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--------~-------------~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      ...+..++...|.+ +||.+.++......        +             .+.+|+++  ..+++|+++++++|+++
T Consensus       316 ~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  392 (399)
T 2oga_A          316 RTERRDELRSHLDA-RGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREW  392 (399)
T ss_dssp             ECSSHHHHHHHHHH-TTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred             ECCCHHHHHHHHHH-CCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence            33355566666655 59999875311000        0             25799996  35899999999999875

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.86  E-value=3.9e-21  Score=167.71  Aligned_cols=202  Identities=17%  Similarity=0.152  Sum_probs=134.6

Q ss_pred             eEEEEecCCCccccCCC--HHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCcc
Q 036024           47 DIIFFCSPNNPTGHAAT--QNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGV  124 (272)
Q Consensus        47 ~~i~~~~p~nptG~~~~--~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~  124 (272)
                      ..+++++|+||+|..++  ++.+++|.++|++||+++|+||+|.++ ..+...........++    +.|+||.+| +|+
T Consensus       201 ~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pd----i~t~sK~~~-~G~  274 (429)
T 4e77_A          201 VACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPD----LTCLGKIIG-GGM  274 (429)
T ss_dssp             EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCS----EEEEEGGGG-TTS
T ss_pred             EEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCC----eeeeccccc-CCC
Confidence            44555667656554433  455999999999999999999999987 4443222222322223    248999999 899


Q ss_pred             ceeEEEecccccccCCcchHHHHHhh---hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh---
Q 036024          125 RLGWTVVPEELLFSSGFPVINDFNRI---ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS---  198 (272)
Q Consensus       125 r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---  198 (272)
                      |+||++++++.+        +.+...   ....+++.+++++.++.+.++....   ++..++++++.+++++.|.+   
T Consensus       275 ~~G~~~~~~~~~--------~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~  343 (429)
T 4e77_A          275 PVGAFGGRREVM--------NALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQ---VGVYETLTELTDSLATGLRHAAK  343 (429)
T ss_dssp             CCEEEEECHHHH--------TTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEECHHHH--------HHhccCCCccccCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999988773        333321   2334445888888888888863221   23444555555555555544   


Q ss_pred             -CCCeEecCCCceEEEeecCCCCh---------------HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHH
Q 036024          199 -LGIKVYGGINAPYVWAHFPGRKS---------------WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESIL  262 (272)
Q Consensus       199 -~g~~~~~~~~~~~~~i~l~~~~~---------------~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~  262 (272)
                       .++....+..|.++++.++....               .++...++++ ||.+.|+.      ...+|+++..++++++
T Consensus       344 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~------~~~~~~~~~~t~e~i~  416 (429)
T 4e77_A          344 EENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEE-GVYLAPSA------FEAGFMSLAHSNEDIQ  416 (429)
T ss_dssp             HTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHT-TEECCSST------TSCEECCTTCCHHHHH
T ss_pred             hCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHC-CeEEeecC------CCCEEEeccCCHHHHH
Confidence             45443333467889999875321               5667777766 99998875      3467888778999999


Q ss_pred             HHHHHHHHhC
Q 036024          263 EASRRLEALF  272 (272)
Q Consensus       263 ~~l~~l~~~l  272 (272)
                      +++++|++++
T Consensus       417 ~~l~~l~~~l  426 (429)
T 4e77_A          417 KTVNAARRCF  426 (429)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998763

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.86  E-value=1.8e-21  Score=171.10  Aligned_cols=246  Identities=14%  Similarity=0.123  Sum_probs=161.0

Q ss_pred             cccccCc-ccchHHhcccc-eeEEeecCC-CCCcccCCCC----C------CCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            6 SVIVGQA-GDLEDEVGKYC-NIEYLECGP-GNNFFPDLKG----T------SRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         6 ~~~~~~~-~~~~~~~~~~g-~~~~~~~~~-~~~~~~dl~~----~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |++..+. +.+...++..| +++.++..+ +.++.+|++.    .      +++.++++++||||||.+.+   +++|.+
T Consensus       179 vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~  255 (456)
T 2z67_A          179 VIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAK  255 (456)
T ss_dssp             EEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHH
T ss_pred             EEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHH
Confidence            4444443 33667777788 888888742 2345666333    1      35667778899999999976   899999


Q ss_pred             HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhh
Q 036024           73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRII  151 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~  151 (272)
                      +|+++|+++++|++|..+..+..+.....+.+..|  +++.|++|.++ .+.++||++++ ++.        +..+....
T Consensus       256 la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D--~~~~s~hK~~~-~p~g~G~l~~~~~~~--------~~~l~~~~  324 (456)
T 2z67_A          256 ICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVD--AVVSSSDKNLL-TPIGGGLVYSTDAEF--------IKEISLSY  324 (456)
T ss_dssp             HHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCS--EEEEEHHHHHC-CCSSCEEEEESCHHH--------HHHHHTTS
T ss_pred             HHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCC--EEEEcCCCCcC-CCCCeEEEEEcCHHH--------HhhcCcCC
Confidence            99999999999999986543211111111211122  67889999765 55889999995 444        33442222


Q ss_pred             hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCCceEEEeec--CCCChHHHH
Q 036024          152 CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----GIKVYGGINAPYVWAHF--PGRKSWDVF  225 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~i~l--~~~~~~~~~  225 (272)
                      .......+.+.+.++...+   +..++++..++.+++++++.+.|+++    |+.+.+++  +++++.+  ++. ..++.
T Consensus       325 ~g~~~~~~~~~~~aal~~l---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~--~~v~~~~~~~~~-~~~l~  398 (456)
T 2z67_A          325 PGRASATPVVNTLVSLLSM---GSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE--SPIASCISVNSD-PVEIA  398 (456)
T ss_dssp             CSCBCSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC--CSSEEEEECSSC-HHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCCC--CeEEEEEecccH-HHHHH
Confidence            1111112233333333333   34566888999999999999999987    88777765  5666676  432 35676


Q ss_pred             HHHHHhcCe---Eee------CCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          226 AEILEKTHI---TTV------PGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       226 ~~ll~~~gi---~v~------~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      ..|.++ ||   .+.      +|..|.....+++|++++  ++++++++++++|++++
T Consensus       399 ~~L~~~-gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~  455 (456)
T 2z67_A          399 AKLYNL-RVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL  455 (456)
T ss_dssp             HHHHHT-TEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred             HHHHHc-CCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence            777665 65   443      244554434579999964  69999999999998764

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.86  E-value=1.2e-20  Score=165.30  Aligned_cols=237  Identities=11%  Similarity=0.078  Sum_probs=150.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeec--CCCCC--cccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLEC--GPGNN--FFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~--~~~~~--~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+. +...+...| ++++++.  +++.+  +.+|++.  .++++++++++ .|+||.+.+   +++|+++|+
T Consensus        97 d~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~~~~d~~~l~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~  172 (446)
T 2x3l_A           97 GDILMARNVHKSVLHALDISQQEGHFIETHQSPLTNHYNKVNLSRLNNDGHKLVVLTY-PNYYGETFN---VEEVIKSLH  172 (446)
T ss_dssp             SCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTTSSEEEEEC-------CCEEEEES-SCTTSCCCC---HHHHHHHHH
T ss_pred             CEEEEecCccHHHHHHHHHcCCeEEEEeCeeccccCcCCCCCHHHHcCCCceEEEEEC-CCCCeEecC---HHHHHHHHH
Confidence            55666665444 666667778 8999988  43311  3344333  36789999999 456999988   889999999


Q ss_pred             HcCCEEEEcccCCc-cccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh-h
Q 036024           76 NNGSIIIFDSAYAA-YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC-T  153 (272)
Q Consensus        76 ~~~~~vi~D~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~  153 (272)
                      ++|+++++||+|+. +.+.+.+.+.....  .+  +++.|+||.++ ++.++||++++++.+.      ...+..... .
T Consensus       173 ~~~~~livDea~~~~~~f~~~~~~~~~~g--~D--i~~~S~~K~l~-~~~g~g~l~~~~~~i~------~~~~~~~~~~~  241 (446)
T 2x3l_A          173 QLNIPVLIDEAHGAHFGLQGFPDSTLNYQ--AD--YVVQSFHKTLP-ALTMGSVLYIHKNAPY------RENIIEYLSYF  241 (446)
T ss_dssp             HTTCCEEEECTTCTTTTSTTSCCCGGGGT--CS--EEEECHHHHSS-SCTTCEEEEEETTCTT------HHHHHHHHHHH
T ss_pred             hcCCeEEEcchhhhhhccCCCCCChHHcC--CC--EEEECCccccc-cccccEEEEEcCCcCC------HHHHHHHHHHH
Confidence            99999999999986 32333222333332  22  89999999664 4445899999887632      112222111 1


Q ss_pred             ccCCcchHHHHHHHHh---cccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHH
Q 036024          154 CFNGASNIAQAGGLAC---LSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILE  230 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~---l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~  230 (272)
                      ...+++.....++..+   +...+   .++..++.+++.+++++.    |+++.++.++.++|+.+++.+..++...|.+
T Consensus       242 ~~~s~~~~~~aal~~a~~~l~~~g---~~~~~~~~~~l~~~l~~~----g~~~~~~~~~~~l~i~~~~~~~~~l~~~L~~  314 (446)
T 2x3l_A          242 QTSSPSYLIMASLESAAQFYKTYD---STLFFAKRAQLIECLENK----GFEMLQVDDPLKLLIKYEGFTGHDIQNWFMN  314 (446)
T ss_dssp             SCSSCCHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHH----TCEEEECSSTTEEEEECTTSCHHHHHHHHHH
T ss_pred             cCCCchHHHHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHc----CCEECcCCCCeEEEEEeCCcCHHHHHHHHHH
Confidence            2222333333222222   22111   122555566666666665    8888776556689999886666777777766


Q ss_pred             hcCeEee-CCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          231 KTHITTV-PGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       231 ~~gi~v~-~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      + ||.+. +|       .+++|+++.  .+++++ +++++|+++
T Consensus       315 ~-GI~v~~~g-------~~~iRi~~~~~~t~e~i-~l~~aL~~~  349 (446)
T 2x3l_A          315 A-HIYLELAD-------DYQALAILPLWHHDDTY-LFDSLLRKI  349 (446)
T ss_dssp             T-TEEESEEC-------SSCEEEECCCCCTTCCC-CHHHHHHHH
T ss_pred             C-CCEEEecC-------CCEEEEEeecCCCHHHH-HHHHHHHHH
Confidence            6 99996 43       368999975  488889 988888765

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.86  E-value=4.3e-20  Score=159.28  Aligned_cols=238  Identities=14%  Similarity=0.105  Sum_probs=155.8

Q ss_pred             cccccccCccc-chHHh----cccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEV----GKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~----~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. ....+    ...| ++++++.+.-..+.-.+  .+++++|++.+|+||||.+.+   +++|+++|+++
T Consensus       106 d~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~  180 (392)
T 3qhx_A          106 DHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAI--RPTTRLIWVETPTNPLLSIAD---IAGIAQLGADS  180 (392)
T ss_dssp             CEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH
T ss_pred             CEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhh--CCCCeEEEEECCCCCCcEEec---HHHHHHHHHHc
Confidence            55666665544 33333    6678 88888875111111112  268999999999999999987   99999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecc-cccccCCcchHHHHHhhhhhcc
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPE-ELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      |+++|+|++|......   .+ ..+    +..+++.|+||.+|.+| .|+||++.++ ++        .+.+........
T Consensus       181 g~~li~D~~~~~~~~~---~~-~~~----~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~--------~~~l~~~~~~~g  244 (392)
T 3qhx_A          181 SAKVLVDNTFASPALQ---QP-LSL----GADVVLHSTTKYIGGHSDVVGGALVTNDEEL--------DQSFAFLQNGAG  244 (392)
T ss_dssp             TCEEEEECTTTCTTTC---CG-GGG----TCSEEEEETTTTTTCSSCCCCEEEEESCHHH--------HHHHHHHHHHHC
T ss_pred             CCEEEEECCCcccccC---Ch-HHh----CCcEEEEcCccccCCCCCceEEEEEECcHHH--------HHHHHHHHHhcC
Confidence            9999999999853211   11 122    22389999999999666 7899999985 44        555655555455


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecC----------------CCceEEEeecC
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGG----------------INAPYVWAHFP  217 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~i~l~  217 (272)
                      ...++..+.++.+.++.     +..+.++..++.+.+.+.|.+. .+. +..|                ..|.++++.++
T Consensus       245 ~~~~~~~~~~~~~~l~~-----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~  319 (392)
T 3qhx_A          245 AVPGPFDAYLTMRGLKT-----LVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMR  319 (392)
T ss_dssp             CCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEET
T ss_pred             CCCCHHHHHHHHhhhhH-----HHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeC
Confidence            55777777666666553     3455677788888899999876 332 2221                12668889997


Q ss_pred             CC-ChHHHHHHHHHhcCeEeeCCCCCC----C--------------CCCCeEEEEccC--CHHHHHHHHHH
Q 036024          218 GR-KSWDVFAEILEKTHITTVPGSGFG----P--------------GGEEYIRISGFG--HRESILEASRR  267 (272)
Q Consensus       218 ~~-~~~~~~~~ll~~~gi~v~~g~~~~----~--------------~~~~~~R~s~~~--~~~~i~~~l~~  267 (272)
                      +. ...+.+...++..++.+..|+.++    +              ..++.+|+|+..  +++.++.+.++
T Consensus       320 ~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~a  390 (392)
T 3qhx_A          320 AGRTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQA  390 (392)
T ss_dssp             TCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHH
Confidence            52 223333344555688888887653    1              135789999854  23334444433

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.86  E-value=7e-21  Score=168.20  Aligned_cols=204  Identities=15%  Similarity=0.075  Sum_probs=147.0

Q ss_pred             CCceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCcc-ccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIY-EIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++++|++..++|++|. +++++.+++|.++|++||+++|+||+|.++...+...... .....++  +  .++||.+| 
T Consensus       220 ~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pd--i--~t~sK~l~-  294 (476)
T 3i5t_A          220 DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPD--I--ITFAKGVT-  294 (476)
T ss_dssp             GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCS--E--EEECGGGG-
T ss_pred             CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcc--h--hhhhhhhc-
Confidence            35567777777888885 8888999999999999999999999999876555433333 2322333  2  26899998 


Q ss_pred             Cc-cceeEEEecccccccCCcchHHHHHhh-------hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHH
Q 036024          122 TG-VRLGWTVVPEELLFSSGFPVINDFNRI-------ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILI  193 (272)
Q Consensus       122 ~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  193 (272)
                      .| +|+|++++++++        ++.+...       ....+++.+++++.|+.++++....   ++..++++++.++++
T Consensus       295 ~G~~plg~v~~~~~i--------~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~l~  363 (476)
T 3i5t_A          295 SGYVPLGGLAISEAV--------LARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---EGIVDQAREMADYFA  363 (476)
T ss_dssp             TTSSCCEEEEECHHH--------HHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHH
T ss_pred             CCCcCeEEEEECHHH--------HHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHH
Confidence            79 999999998887        4444332       3335556888999999888873222   456777888888888


Q ss_pred             HHHHhCC----CeEecCCCceEEEeecCCCC------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--cc
Q 036024          194 DTLASLG----IKVYGGINAPYVWAHFPGRK------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GF  255 (272)
Q Consensus       194 ~~L~~~g----~~~~~~~~~~~~~i~l~~~~------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~  255 (272)
                      +.|+.++    +....+ .|.++++.+....            ..++...++++ ||.+.|.      + +++|++  +.
T Consensus       364 ~~L~~l~~~~~v~~v~~-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~------g-~~iRi~p~l~  434 (476)
T 3i5t_A          364 AALASLRDLPGVAETRS-VGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFEL-GLIVRPL------G-DLCVISPPLI  434 (476)
T ss_dssp             HHHHTTTTSTTEEEEEE-ETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHT-TEECEEE------T-TEEEECCCTT
T ss_pred             HHHHHHhcCCCeEEEEe-cCceeEEEEecCccccccccchhHHHHHHHHHHHHC-CCEEEec------C-CEEEEECCCC
Confidence            8887652    333443 4667778776321            34556666665 9999873      1 689999  67


Q ss_pred             CCHHHHHHHHHHHHHhC
Q 036024          256 GHRESILEASRRLEALF  272 (272)
Q Consensus       256 ~~~~~i~~~l~~l~~~l  272 (272)
                      .+++++++++++|++++
T Consensus       435 ~t~e~i~~~l~~l~~~l  451 (476)
T 3i5t_A          435 ISRAQIDEMVAIMRQAI  451 (476)
T ss_dssp             CCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence            79999999999998763

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.86  E-value=4.1e-20  Score=159.95  Aligned_cols=240  Identities=16%  Similarity=0.169  Sum_probs=152.8

Q ss_pred             cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. ...    .++..| +++.++.+....+.-.+  .+++++|++++|+||||.+++   +++|+++|+++
T Consensus       106 d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i--~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~  180 (403)
T 3cog_A          106 DQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAI--TPETKLVWIETPTNPTQKVID---IEGCAHIVHKH  180 (403)
T ss_dssp             CEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSS
T ss_pred             CEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHc
Confidence            55666666554 222    346678 99999876111111112  268899999999999999997   89999999999


Q ss_pred             C-CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecc-cccccCCcchHHHHHhhhhhc
Q 036024           78 G-SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPE-ELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        78 ~-~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      | +++|+|++|..+.+.   .++. +    +..+++.|+||.+|.+| .|+||+++++ ++        .+.+.......
T Consensus       181 g~~~livD~~~~~~~~~---~~~~-~----~~div~~S~sK~~~g~~~~~~G~v~~~~~~l--------~~~l~~~~~~~  244 (403)
T 3cog_A          181 GDIILVVDNTFMSPYFQ---RPLA-L----GADISMYSATKYMNGHSDVVMGLVSVNCESL--------HNRLRFLQNSL  244 (403)
T ss_dssp             SCCEEEEECTTTCTTTC---CTTT-T----TCSEEEEETTTTTTCSSCCCCEEEEECCHHH--------HHHHHHHHHHH
T ss_pred             CCCEEEEECCCcccccC---Cccc-c----CCeEEEEcChhhccCCCCCeEEEEEECcHHH--------HHHHHHHHHhc
Confidence            9 999999999875532   1221 2    34599999999998665 5799999864 44        55565555444


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---------------CCeEecCC---CceEEEeec
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---------------GIKVYGGI---NAPYVWAHF  216 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------------g~~~~~~~---~~~~~~i~l  216 (272)
                      ....+.+.+.++.+.++.     +..+.++..++...+.+.|++.               ++.+..++   .+.++.+.+
T Consensus       245 g~~~~~~~~~~~~~~l~~-----l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l  319 (403)
T 3cog_A          245 GAVPSPIDCYLCNRGLKT-----LHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYI  319 (403)
T ss_dssp             CCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEE
T ss_pred             CCCCCHHHHHHHHhhhhH-----HHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEe
Confidence            445677777766666652     2334555566666666666553               23332221   244555577


Q ss_pred             CCCChHHHHHHHHHhcCeEeeC---CC----------CC--C---------CCCCCeEEEEccC--CHHHHHHHHHHHHH
Q 036024          217 PGRKSWDVFAEILEKTHITTVP---GS----------GF--G---------PGGEEYIRISGFG--HRESILEASRRLEA  270 (272)
Q Consensus       217 ~~~~~~~~~~~ll~~~gi~v~~---g~----------~~--~---------~~~~~~~R~s~~~--~~~~i~~~l~~l~~  270 (272)
                      ++.  .+...+++++.||.+..   |.          .+  .         ...++.+|+|+..  ++++++.+.+.|++
T Consensus       320 ~~~--~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~  397 (403)
T 3cog_A          320 KGT--LQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA  397 (403)
T ss_dssp             SSC--HHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             cCC--HHHHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence            642  24455666777885432   21          11  1         0126799999754  46667777777766


Q ss_pred             h
Q 036024          271 L  271 (272)
Q Consensus       271 ~  271 (272)
                      +
T Consensus       398 ~  398 (403)
T 3cog_A          398 A  398 (403)
T ss_dssp             H
T ss_pred             h
Confidence            4

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.86  E-value=1.1e-20  Score=165.99  Aligned_cols=255  Identities=15%  Similarity=0.022  Sum_probs=163.6

Q ss_pred             ccccccCcccchHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc-
Q 036024            5 SSVIVGQAGDLEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN-   77 (272)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-   77 (272)
                      .|++...++.|...++..| +++.+|++++ ++.+|++.     .+++++|++++|+||||.+.+   +++|.++|+++ 
T Consensus       142 ~vi~~~~h~~~~~~~~~~G~~v~~v~~~~~-~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~  217 (452)
T 2dgk_A          142 NLVCGPVQICWHKFARYWDVELREIPMRPG-QLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEF---PQPLHDALDKFQ  217 (452)
T ss_dssp             EEEESSCCHHHHHHHHHTTCEEEECCCBTT-BCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCC---HHHHHHHHHHHH
T ss_pred             EEEECCCcHHHHHHHHHcCceEEEEecCCC-CCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHHh
Confidence            5666552222777778889 9999999762 56666443     257889999999999999976   88899999985 


Q ss_pred             -----CCEEEEcccCCcccc---CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccc-ccccCCcchHHHHH
Q 036024           78 -----GSIIIFDSAYAAYVT---DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE-LLFSSGFPVINDFN  148 (272)
Q Consensus        78 -----~~~vi~D~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-~~~~~~~~~~~~~~  148 (272)
                           ++++++|++|..+..   .+... . .+ ...+-.++..|++| ++..|.++||++++++ .+.+.+......+.
T Consensus       218 ~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~-~~-~~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~  293 (452)
T 2dgk_A          218 ADTGIDIDMHIDAASGGFLAPFVAPDIV-W-DF-RLPRVKSISASGHK-FGLAPLGCGWVIWRDEEALPQELVFNVDYLG  293 (452)
T ss_dssp             HHHCCCCCEEEECTTGGGTHHHHCTTCC-C-ST-TSTTEEEEEEETTT-TTCCCSSCEEEEESSGGGSCGGGCEEECCTT
T ss_pred             hccCCCCcEEEEcccHHHHHHhhCccch-h-hc-CCCCCcEEEECccc-ccCCCCCeEEEEEcCHHHHHHHhccCccccC
Confidence                 999999999997643   22111 1 11 12223367778899 5458889999999764 32111100000000


Q ss_pred             hhh-----hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC----CCceEEEeecCC
Q 036024          149 RII-----CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGG----INAPYVWAHFPG  218 (272)
Q Consensus       149 ~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~i~l~~  218 (272)
                      ...     ..+........+.++...+   +.+.++++.+++.++++++.+.|+++ ++++..+    ....++.+.+++
T Consensus       294 ~~~~~~~~~~~r~~~~~~~~~aal~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~  370 (452)
T 2dgk_A          294 GQIGTFAINFSRPAGQVIAQYYEFLRL---GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKD  370 (452)
T ss_dssp             CCEEECCSCCSCBCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECT
T ss_pred             CCCCCcccCCCChhHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecC
Confidence            000     0011111334444444443   33556888999999999999999998 5888754    345677777764


Q ss_pred             C-----ChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          219 R-----KSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       219 ~-----~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      .     +..++...|.++ ||.+....... ..+.+++|+++.  .|+++++++++.|+++
T Consensus       371 ~~~~~~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~  430 (452)
T 2dgk_A          371 GEDPGYTLYDLSERLRLR-GWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKAS  430 (452)
T ss_dssp             TCCCSCCHHHHHHHHHHT-TCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             cccccCCHHHHHHHHHhc-CCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            2     236777777655 99764322111 123568999974  3789999999998765

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.86  E-value=7.8e-20  Score=157.54  Aligned_cols=206  Identities=12%  Similarity=0.146  Sum_probs=137.6

Q ss_pred             cccccccCccc-chHH----hcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDE----VGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~----~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. +...    ++..| +++.++...-..+.-.+  .++++++++++|+||||.+++   +++|.++|+++
T Consensus        99 d~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~  173 (389)
T 3acz_A           99 DHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAW--KPNTKMVYLESPANPTCKVSD---IKGIAVVCHER  173 (389)
T ss_dssp             CEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhc--CCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc
Confidence            55666666554 3333    46678 88888874211111112  257899999999999999997   89999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecc-cccccCCcchHHHHHhhhhhcc
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPE-ELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      |+++|+|++|..+...   .++ .+    +..+++.|+||.+|.+|.|+ ||+++++ ++        ++.+........
T Consensus       174 ~~~livD~~~~~~~~~---~~~-~~----~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~--------~~~l~~~~~~~g  237 (389)
T 3acz_A          174 GARLVVDATFTSPCFL---KPL-EL----GADIALHSVSKYINGHGDVIGGVSSAKTAED--------IATIKFYRKDAG  237 (389)
T ss_dssp             TCEEEEECTTTCTTTC---CGG-GT----TCSEEEEETTTTTTCSSCCCCEEEEESSHHH--------HHHHHHHHHHHC
T ss_pred             CCEEEEECCCcccccc---Ccc-cc----CCeEEEECChhhccCCCCceeEEEEECcHHH--------HHHHHHHHHhcC
Confidence            9999999999865432   122 12    23499999999999899998 9999988 66        555555443333


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-C--------------eEec---CCCceEEEeecC
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-I--------------KVYG---GINAPYVWAHFP  217 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------------~~~~---~~~~~~~~i~l~  217 (272)
                      ...+...+.++.+.++.     +..+.++..++.+.+.+.|++++ +              .+..   ...+.++.+.++
T Consensus       238 ~~~~~~~~~~~~~~l~~-----l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~  312 (389)
T 3acz_A          238 SLMAPMDAFLCARGMKT-----LPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK  312 (389)
T ss_dssp             CCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES
T ss_pred             CCCCHHHHHHHHcCccH-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC
Confidence            44555666655555542     24445666677788888887652 1              1111   113567778886


Q ss_pred             CCChHHHHHHHHHhcCeEeeC
Q 036024          218 GRKSWDVFAEILEKTHITTVP  238 (272)
Q Consensus       218 ~~~~~~~~~~ll~~~gi~v~~  238 (272)
                      +   .+...+++++.||.+.+
T Consensus       313 ~---~~~~~~~l~~~~i~~~~  330 (389)
T 3acz_A          313 S---FEAAKKLMEHLKVCTLA  330 (389)
T ss_dssp             S---HHHHHHHHTTCSSSEEB
T ss_pred             C---HHHHHHHHHhCCCcEEC
Confidence            4   34466677777988876

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.85  E-value=6.6e-20  Score=158.46  Aligned_cols=241  Identities=16%  Similarity=0.158  Sum_probs=159.4

Q ss_pred             cccccccCccc-chHHh----cccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEV----GKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~----~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. +...+    ...| +++.++.+.-..+.-.+  .++++++++++|+||||.+++   +++|+++|+++
T Consensus       105 d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i--~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~  179 (398)
T 1gc0_A          105 DEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAM--TPATRVIYFESPANPNMHMAD---IAGVAKIARKH  179 (398)
T ss_dssp             CEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGG
T ss_pred             CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhc--CCCCeEEEEECCCCCCccccc---HHHHHHHHHHc
Confidence            55666666554 44433    6677 88888764111111112  257899999999999999987   89999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccce-eEEEecccccccCCcchHHHHHhhhhh-cc
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRL-GWTVVPEELLFSSGFPVINDFNRIICT-CF  155 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  155 (272)
                      |+++|+|++|..+....   ++ ..    +..+++.|+||.+|.+|.|+ ||++++++.+       ...+...... ..
T Consensus       180 ~~~li~D~~~~~~~~~~---~~-~~----~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~-------~~~~~~~~~~~~~  244 (398)
T 1gc0_A          180 GATVVVDNTYCTPYLQR---PL-EL----GADLVVHSATKYLSGHGDITAGIVVGSQALV-------DRIRLQGLKDMTG  244 (398)
T ss_dssp             TCEEEEECTTTHHHHCC---GG-GG----TCSEEEEETTTTTTCSSSCCCEEEEECHHHH-------HHHHHTHHHHHTC
T ss_pred             CCEEEEECCCcccccCC---ch-hh----CceEEEECCccccCCCCCCeEEEEEEChHHH-------HHHHHHHhhccCC
Confidence            99999999998755432   22 22    23489999999999899998 9999887762       2234433333 33


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-C--------------eEecC---CCceEEEeecC
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-I--------------KVYGG---INAPYVWAHFP  217 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------------~~~~~---~~~~~~~i~l~  217 (272)
                      .+.+...+.++.+.++     .+..+.++..++.+.+.+.|.+++ +              .+..+   ..+.++.+.++
T Consensus       245 ~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~  319 (398)
T 1gc0_A          245 AVLSPHDAALLMRGIK-----TLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELK  319 (398)
T ss_dssp             CCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEET
T ss_pred             CCCCHHHHHHHHhccc-----hHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEEC
Confidence            4466777666666554     235566777888888888887752 2              12221   24667777886


Q ss_pred             CCChHHHHHHHHHhcCeEeeC---CCCC------------C-C--------CCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024          218 GRKSWDVFAEILEKTHITTVP---GSGF------------G-P--------GGEEYIRISGFG--HRESILEASRRLEAL  271 (272)
Q Consensus       218 ~~~~~~~~~~ll~~~gi~v~~---g~~~------------~-~--------~~~~~~R~s~~~--~~~~i~~~l~~l~~~  271 (272)
                      +  ..+....++++.|+.+..   |+..            . +        ...+.+|+|+..  ++++++.+.+.|+++
T Consensus       320 ~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~  397 (398)
T 1gc0_A          320 G--GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS  397 (398)
T ss_dssp             T--HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             C--CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence            4  234566677777887765   3221            0 0        114899999743  678899999988875

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.85  E-value=7.7e-21  Score=165.88  Aligned_cols=202  Identities=16%  Similarity=0.165  Sum_probs=139.6

Q ss_pred             CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      +++++++..++|++|.+. +++.+++|.++|++||+++|+||+|.++ ..+...........++    +.|+||.+| +|
T Consensus       200 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~d----i~t~sK~~~-~G  273 (429)
T 3k28_A          200 DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPD----LTCLGKVIG-GG  273 (429)
T ss_dssp             GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCS----EEEECGGGG-TT
T ss_pred             CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCc----eehhhhhhc-CC
Confidence            445555555566666555 5778999999999999999999999987 4442222222222222    347899998 69


Q ss_pred             cceeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-  199 (272)
                      +|+||++++++++        +.+..   .....+++.+++++.++.++++...    ++..++++++.+++++.|+++ 
T Consensus       274 ~~iG~~~~~~~~~--------~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~  341 (429)
T 3k28_A          274 LPVGAYGGKAEIM--------RQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAA  341 (429)
T ss_dssp             SCCEEEEECHHHH--------TTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEcHHHH--------hhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999988873        33322   1233445688899999998887443    567778888888888887764 


Q ss_pred             ---CC-eEecCCCceEEEeecCCCC--------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHH
Q 036024          200 ---GI-KVYGGINAPYVWAHFPGRK--------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESI  261 (272)
Q Consensus       200 ---g~-~~~~~~~~~~~~i~l~~~~--------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i  261 (272)
                         +. .... ..|.++++.+....              ..++...++++ ||.+.|+.      .+.+|+++..+++++
T Consensus       342 ~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~------~~~~r~~~~~t~e~i  413 (429)
T 3k28_A          342 EKHGIPHHIN-RAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQ-GVFLPPSQ------FEGLFLSTVHSDADI  413 (429)
T ss_dssp             HHTTCCCEEE-EETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSST------TSCBCCCTTCCHHHH
T ss_pred             hhCCCCEEEE-eeccEEEEEEecCCcccccccccccHHHHHHHHHHHHHC-CeEEecCC------CCCEEEECCCCHHHH
Confidence               32 2233 34667777764211              24566666655 99998864      457899988899999


Q ss_pred             HHHHHHHHHhC
Q 036024          262 LEASRRLEALF  272 (272)
Q Consensus       262 ~~~l~~l~~~l  272 (272)
                      ++++++|++++
T Consensus       414 ~~~l~~l~~~l  424 (429)
T 3k28_A          414 EATIAAAEIAM  424 (429)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998763

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.85  E-value=9.6e-21  Score=166.21  Aligned_cols=206  Identities=11%  Similarity=0.061  Sum_probs=143.5

Q ss_pred             CCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++++|+++.++|||| ..++++.+++|.++|++||+++|+||+|.++...+...........++    +.|+||.+   
T Consensus       230 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~d----i~t~sK~l---  302 (449)
T 2cjg_A          230 HDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPD----IVAFGKKT---  302 (449)
T ss_dssp             TTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCS----EEEECGGG---
T ss_pred             CceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCce----EEEecCcc---
Confidence            4667766665589999 599999999999999999999999999998765554323222222222    23789988   


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                        |+||+++++++.......   .+.......+.+.+++++.|+.++++....   ++..++++++.+++++.|+++   
T Consensus       303 --~iG~~~~~~~~~~~l~~~---~~~~~~~~~t~~~n~~~~~aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~  374 (449)
T 2cjg_A          303 --QVCGVMAGRRVDEVADNV---FAVPSRLNSTWGGNLTDMVRARRILEVIEA---EGLFERAVQHGKYLRARLDELAAD  374 (449)
T ss_dssp             --SSEEEEECGGGGGSTTCT---TTSTTSSCCSSSSCHHHHHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --cEEEEEECHHHhhhhhhc---ccCCcccccCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhh
Confidence              689999988773210000   011122334455788999988888863222   346678888888888888764   


Q ss_pred             -C--CeEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          200 -G--IKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       200 -g--~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                       .  +....+ .|.++++.++.. ...++...|+++ ||.+.|+.      .+++|++  +..+++++++++++|++++
T Consensus       375 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~g------~~~iRi~~~~~~t~e~i~~~l~~l~~~l  445 (449)
T 2cjg_A          375 FPAVVLDPRG-RGLMCAFSLPTTADRDELIRQLWQR-AVIVLPAG------ADTVRFRPPLTVSTAEIDAAIAAVRSAL  445 (449)
T ss_dssp             STTTSEEEEE-ETTEEEEECSSHHHHHHHHHHHHHT-TEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCceeeEee-ccEEEEEEECChHHHHHHHHHHHHC-CeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence             2  444444 466777888742 345677777764 99999863      5799996  4679999999999998763

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.85  E-value=3.5e-21  Score=167.79  Aligned_cols=201  Identities=16%  Similarity=0.132  Sum_probs=137.8

Q ss_pred             EEEEecCCCc-cccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccc
Q 036024           48 IIFFCSPNNP-TGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVR  125 (272)
Q Consensus        48 ~i~~~~p~np-tG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r  125 (272)
                      .+++++|+|+ ||.++ +++.+++|.++ ++||+++|+||+|.++ ..+...........++    +.|+||.+| +|+|
T Consensus       201 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d----i~s~sK~l~-~G~~  273 (424)
T 2e7u_A          201 AAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGLKPD----LVTLGKILG-GGLP  273 (424)
T ss_dssp             EEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTCCCS----EEEECGGGG-TTSS
T ss_pred             EEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCCCcc----hhhhhhhhh-CCcc
Confidence            4455566554 89765 79999999999 9999999999999977 3332211122222223    238999999 6999


Q ss_pred             eeEEEecccccccCCcchHHHHHh---hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          126 LGWTVVPEELLFSSGFPVINDFNR---IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       126 ~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      +||++++++++        +.+..   .....+++.+++++.++.++++....  .++..++++++.+++++.|+++   
T Consensus       274 ~G~~~~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~  343 (424)
T 2e7u_A          274 AAAYAGRREIM--------EKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLKEVLKE  343 (424)
T ss_dssp             CEEEEECHHHH--------TTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEcHHHH--------hhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999998773        33332   11223445788888888887763211  1456777888888888888764   


Q ss_pred             -CCeEecCCCceEEEeecCCC--------------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHH
Q 036024          200 -GIKVYGGINAPYVWAHFPGR--------------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEA  264 (272)
Q Consensus       200 -g~~~~~~~~~~~~~i~l~~~--------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~  264 (272)
                       ++....+..|.++|+.++..              ...++...+++ +||.+.|+.      ...+|+++..++++++++
T Consensus       344 ~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~------~~~~~~~~~~t~~~i~~~  416 (424)
T 2e7u_A          344 KGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLD-RGIYWPPSN------FEAAFLSVAHREEDVEKT  416 (424)
T ss_dssp             TTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHT-TTEECCSSS------SSCEECCTTCCHHHHHHH
T ss_pred             CCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHH-CCeEEeccC------CCceEeeccCCHHHHHHH
Confidence             55322123567899998641              12356666664 599999875      235788887899999999


Q ss_pred             HHHHHHhC
Q 036024          265 SRRLEALF  272 (272)
Q Consensus       265 l~~l~~~l  272 (272)
                      +++|+++|
T Consensus       417 l~~l~~~l  424 (424)
T 2e7u_A          417 LEALRKAL  424 (424)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            99999875

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.85  E-value=4.8e-21  Score=168.30  Aligned_cols=205  Identities=11%  Similarity=0.065  Sum_probs=136.2

Q ss_pred             CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++++++++..+||||.++ +++.+++|.++|++||+++|+||+|.++ ..+...........++    +.|+||.++ +|
T Consensus       201 ~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d----i~s~sK~l~-~G  274 (453)
T 2cy8_A          201 DIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDVQPD----LTCLAKASA-GG  274 (453)
T ss_dssp             GEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCS----EEEEEGGGG-TT
T ss_pred             CEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCCCCc----EEEEChhhh-CC
Confidence            556665555568899764 7999999999999999999999999976 4332222222222223    238999998 69


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHhC---
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS-EGLEAVHSVVDYYKENTKILIDTLASL---  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~---  199 (272)
                      +|+||+++++++........   ........+.+.+++++.++.+.++. . .   ++..++++++.+++++.|+++   
T Consensus       275 ~~~G~v~~~~~~~~~l~~~~---~~~~~~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~~L~~~~~~  347 (453)
T 2cy8_A          275 LPGGILGGREDVMGVLSRGS---DRKVLHQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFAREAMNHLFAR  347 (453)
T ss_dssp             SSCEEEEECHHHHTTSSSCC------------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEechHHHHHHhcccc---CCCceeCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999987732211100   00111223445788888888888764 3 2   345667777777777777654   


Q ss_pred             -CCeEecCCCceEEEeecCC-----C------------C---hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCH
Q 036024          200 -GIKVYGGINAPYVWAHFPG-----R------------K---SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHR  258 (272)
Q Consensus       200 -g~~~~~~~~~~~~~i~l~~-----~------------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~  258 (272)
                       ++....+..|.++|+.++.     .            +   ..++...++++ ||.+.|+        +.+|+++..++
T Consensus       348 ~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gv~v~~~--------~~~~l~~~~t~  418 (453)
T 2cy8_A          348 KGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILE-GVDIGGR--------GSVFLSAQHER  418 (453)
T ss_dssp             TTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHT-TEECBTT--------TEEECCTTCCH
T ss_pred             CCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHC-CeEEeCC--------CCEEeeccCCH
Confidence             5433223467789999874     1            1   34566667655 9999543        24788877899


Q ss_pred             HHHHHHHHHHHHh
Q 036024          259 ESILEASRRLEAL  271 (272)
Q Consensus       259 ~~i~~~l~~l~~~  271 (272)
                      +++++++++|+++
T Consensus       419 ~~i~~~l~~l~~~  431 (453)
T 2cy8_A          419 EHVEHLVTTFDRV  431 (453)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999875

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.85  E-value=2.3e-19  Score=156.27  Aligned_cols=238  Identities=20%  Similarity=0.203  Sum_probs=156.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...+...| +++.++++++ ++.+|++.     .+++++|++++   |||...+   +++|+++|++
T Consensus        91 d~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~~~---l~~i~~la~~  163 (424)
T 2po3_A           91 GEVIMPSMTFAATPHALRWIGLTPVFADIDPD-TGNLDPDQVAAAVTPRTSAVVGVH---LWGRPCA---ADQLRKVADE  163 (424)
T ss_dssp             SEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TSSBCHHHHGGGCCTTEEEEEEEC---GGGCCCC---HHHHHHHHHH
T ss_pred             CEEEECCCccHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhhCcCCcEEEEEC---CCCCcCC---HHHHHHHHHH
Confidence            66777776665 777788888 9999999864 56566332     25788888854   8998754   9999999999


Q ss_pred             cCCEEEEcccCC-ccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEec-ccccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYA-AYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +|+++|+|++|. ++.+++.  ++..+   .+  +++.||||..+++|.|+||++++ +++        .+.+.......
T Consensus       164 ~~~~li~Dea~~~g~~~~~~--~~~~~---~d--i~~~S~sk~K~l~~~~~G~~v~~~~~l--------~~~l~~~~~~~  228 (424)
T 2po3_A          164 HGLRLYFDAAHALGCAVDGR--PAGSL---GD--AEVFSFHATKAVNAFEGGAVVTDDADL--------AARIRALHNFG  228 (424)
T ss_dssp             TTCEEEEECTTCTTCEETTE--ETTSS---SS--EEEEECCTTSSSCCSSCEEEEESCHHH--------HHHHHHHHBTT
T ss_pred             cCCEEEEECccccCCeECCe--ecccc---cC--EEEEeCCCCCCccCCCCeEEEeCCHHH--------HHHHHHHHhcC
Confidence            999999999998 4555432  22222   23  88999995555566899999998 455        44444333211


Q ss_pred             cC------------CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec-CCCc----eEEEeec
Q 036024          155 FN------------GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG-GINA----PYVWAHF  216 (272)
Q Consensus       155 ~~------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~----~~~~i~l  216 (272)
                      ..            ..+.....   ..+.  ..+.+++..++.+++.+++.+.|.++ |+++.. +.++    .++++.+
T Consensus       229 ~~~~~~~~~~g~~~~~~~~~aa---~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~  303 (424)
T 2po3_A          229 FDLPGGSPAGGTNAKMSEAAAA---MGLT--SLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEI  303 (424)
T ss_dssp             TTCTTCCTTCCCBCCCCHHHHH---HHHH--HHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEE
T ss_pred             ccccccccccCcCCCcCHHHHH---HHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEE
Confidence            10            11222222   2221  12445677788888889999999887 888866 3322    3444676


Q ss_pred             C----CCChHHHHHHHHHhcCeEeeCCCCCCCC--------------C-------CCeEEEE--ccCCHHHHHHHHHHHH
Q 036024          217 P----GRKSWDVFAEILEKTHITTVPGSGFGPG--------------G-------EEYIRIS--GFGHRESILEASRRLE  269 (272)
Q Consensus       217 ~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~--------------~-------~~~~R~s--~~~~~~~i~~~l~~l~  269 (272)
                      +    +.+..++...| +++||.+.+  .|.+.              .       ...+|++  ...+++|+++++++|+
T Consensus       304 ~~~~~~~~~~~l~~~L-~~~gI~v~~--~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~  380 (424)
T 2po3_A          304 DEATTGIHRDLVMEVL-KAEGVHTRA--YFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLR  380 (424)
T ss_dssp             CHHHHSSCHHHHHHHH-HHTTEECBC--TTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHH
T ss_pred             CCccchhhHHHHHHHH-HHCCCceec--ccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHH
Confidence            6    34555655554 556999987  23211              0       1127887  4568999999999998


Q ss_pred             Hh
Q 036024          270 AL  271 (272)
Q Consensus       270 ~~  271 (272)
                      ++
T Consensus       381 ~~  382 (424)
T 2po3_A          381 LC  382 (424)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.85  E-value=2.4e-19  Score=155.64  Aligned_cols=243  Identities=16%  Similarity=0.163  Sum_probs=154.6

Q ss_pred             cccccccCccc-chHH----hcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDE----VGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~----~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+. ....    ++..| +++.++.+.+     ++++  .+++++|++++|+||||.+++   +++|+++|+
T Consensus        96 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~  167 (412)
T 2cb1_A           96 DEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPEPE-----AVREALSAKTRAVFVETVANPALLVPD---LEALATLAE  167 (412)
T ss_dssp             CEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSSHH-----HHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHH
T ss_pred             CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCHH-----HHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHH
Confidence            55666666554 2322    45577 8888887511     2222  257899999999999999987   999999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccc--------cCC-------
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLF--------SSG-------  140 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~--------~~~-------  140 (272)
                      ++|+++|+|++|..+....  .+. ..    +..+++.|+||.++.+|.|+|++++.++...        ...       
T Consensus       168 ~~~~~li~D~~~~~~~~~~--~~~-~~----~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~  240 (412)
T 2cb1_A          168 EAGVALVVDNTFGAAGALC--RPL-AW----GAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPW  240 (412)
T ss_dssp             HHTCEEEEECGGGTTTTSC--CGG-GG----TCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------H
T ss_pred             HcCCEEEEECCCccccccC--Ccc-cc----CCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchh
Confidence            9999999999998652211  111 11    3449999999999889999999887663210        000       


Q ss_pred             -----cchHHHHHhhh-hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEe-cC------
Q 036024          141 -----FPVINDFNRII-CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVY-GG------  206 (272)
Q Consensus       141 -----~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~------  206 (272)
                           ..+.+.++... .......+......+...++     .+.+..++.+++.+++.+.|.+. ++... .|      
T Consensus       241 ~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~-----~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p  315 (412)
T 2cb1_A          241 EALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLE-----TVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDP  315 (412)
T ss_dssp             HHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGG-----GHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCT
T ss_pred             hccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCc-----hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCc
Confidence                 01122232222 11111223333332222222     23455566778899999999886 77633 22      


Q ss_pred             ----------CCceEEEeecCCCChHHHHHHHHHhcCeEeeCCC---------CCCCC---------------CCCeEEE
Q 036024          207 ----------INAPYVWAHFPGRKSWDVFAEILEKTHITTVPGS---------GFGPG---------------GEEYIRI  252 (272)
Q Consensus       207 ----------~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~---------~~~~~---------------~~~~~R~  252 (272)
                                ..+.++.+.+ + + .+...+++++.||.+ .++         .+...               ..+.+|+
T Consensus       316 ~~~~~~~~~~~~~~iv~~~~-~-~-~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~  391 (412)
T 2cb1_A          316 AHRNARKYLASGGPILTLDL-G-D-LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRV  391 (412)
T ss_dssp             THHHHHHHCSSSCSEEEEEC-S-S-HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEE
T ss_pred             cHHHHHHhCCCCceEEEEEe-C-C-HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEE
Confidence                      2356788888 4 4 445566677779999 774         33210               1579999


Q ss_pred             Ecc--CCHHHHHHHHHHHHH
Q 036024          253 SGF--GHRESILEASRRLEA  270 (272)
Q Consensus       253 s~~--~~~~~i~~~l~~l~~  270 (272)
                      |+.  +++++++.+.++|++
T Consensus       392 s~g~~~~~~~i~~l~~al~~  411 (412)
T 2cb1_A          392 SVGLEDPLDLLALFEEALEA  411 (412)
T ss_dssp             ECCSSCHHHHHHHHHHHHHC
T ss_pred             EeccCCHHHHHHHHHHHHhh
Confidence            974  478889999998875

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.85  E-value=1.2e-20  Score=166.56  Aligned_cols=204  Identities=11%  Similarity=0.023  Sum_probs=142.2

Q ss_pred             CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++++|++..++|++|.+. +++.+++|.++|+++|+++|+||+|.++...+...........++  +  .++||.+|..|
T Consensus       223 ~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pd--i--~t~sK~l~gg~  298 (472)
T 3hmu_A          223 RVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPH--I--MTIAKGLSSGY  298 (472)
T ss_dssp             GEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCS--E--EEECGGGTTTS
T ss_pred             CEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCc--e--eeechhhhcCC
Confidence            445555556677778755 888899999999999999999999998765553322223332333  2  26899998445


Q ss_pred             cceeEEEecccccccCCcchHHHHH--hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHH-HHHHHHHHHHHhC-
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFN--RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYK-ENTKILIDTLASL-  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~-  199 (272)
                      +|+||++++++.        ++.+.  ......+++.+++++.|+.+.++....   +...++++ ++.+++++.|+++ 
T Consensus       299 ~plG~v~~~~~i--------~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~~l~~~L~~l~  367 (472)
T 3hmu_A          299 APIGGSIVCDEV--------AHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDHVRNVAAPYLKEKWEALT  367 (472)
T ss_dssp             SCCEEEEEEHHH--------HHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHTHHHHHHHHHHGGG
T ss_pred             cceEEEEECHHH--------HHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999998888        55552  123334556888999998888873222   34566777 7777888877664 


Q ss_pred             ---CCeEecCCCceEEEeecCCCC-------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHH
Q 036024          200 ---GIKVYGGINAPYVWAHFPGRK-------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESI  261 (272)
Q Consensus       200 ---g~~~~~~~~~~~~~i~l~~~~-------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i  261 (272)
                         .+....+ .|.++++.+....             ..++...++++ ||.+.|+.       +++|++  +..+++++
T Consensus       368 ~~~~v~~vr~-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~g-------~~iRi~p~~~~t~e~i  438 (472)
T 3hmu_A          368 DHPLVGEAKI-VGMMASIALTPNKASRAKFASEPGTIGYICRERCFAN-NLIMRHVG-------DRMIISPPLVITPAEI  438 (472)
T ss_dssp             GSTTEEEEEE-ETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHT-TBCCEEET-------TEEEECCCTTCCHHHH
T ss_pred             cCCCeEEEEe-cCceEEEEEecCccccccccchhHHHHHHHHHHHHHC-CcEEEecC-------CEEEEECCCCCCHHHH
Confidence               2333443 4667777775211             34556666665 99998752       789999  56799999


Q ss_pred             HHHHHHHHHhC
Q 036024          262 LEASRRLEALF  272 (272)
Q Consensus       262 ~~~l~~l~~~l  272 (272)
                      ++++++|++++
T Consensus       439 ~~~l~~l~~~l  449 (472)
T 3hmu_A          439 DEMFVRIRKSL  449 (472)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998763

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.84  E-value=1.8e-19  Score=155.18  Aligned_cols=243  Identities=16%  Similarity=0.097  Sum_probs=156.6

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...+...| +++.++.+++ ++.+|++.+     +++++++   ++||||...+   +++|.++|++
T Consensus        97 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~---~~~i~~l~~~  169 (391)
T 3dr4_A           97 DEVIVPSLTYIASANSVTYCGATPVLVDNDPR-TFNLDAAKLEALITPRTKAIM---PVHLYGQICD---MDPILEVARR  169 (391)
T ss_dssp             CEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred             CEEEECCCchHHHHHHHHHCCCEEEEEecCcc-ccCcCHHHHHHhcCCCceEEE---EECCCCChhh---HHHHHHHHHH
Confidence            56777766665 777778888 9999999855 455564442     5677766   5689999876   8889999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +|+++|+|++|....... ......+   .+  +.+.|||  |.++ + .+.|+++.+++.+       .+.+.......
T Consensus       170 ~~~~li~D~a~~~g~~~~-~~~~~~~---~d--i~~~S~s~~K~l~-~-g~gg~~~~~~~~~-------~~~~~~~~~~g  234 (391)
T 3dr4_A          170 HNLLVIEDAAEAVGATYR-GKKSGSL---GD--CATFSFFGNAIIT-T-GEGGMITTNDDDL-------AAKMRLLRGQG  234 (391)
T ss_dssp             TTCEEEEECTTCTTCEET-TEETTSS---SS--EEEEECBTTSSSC-C-BSCEEEEESCHHH-------HHHHHHHHBTT
T ss_pred             cCCEEEEECcccccceEC-Ceeeccc---CC--EEEEECCCCCcCC-c-CCeEEEEECCHHH-------HHHHHHHHhcC
Confidence            999999999998533211 1111111   12  6666766  7775 3 5689988877642       33333322111


Q ss_pred             cC------------CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC--C----C-ceEEEee
Q 036024          155 FN------------GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG--I----N-APYVWAH  215 (272)
Q Consensus       155 ~~------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~----~-~~~~~i~  215 (272)
                      ..            ........++.....   ...+++..++.+++.+++++.|.++|+.+..+  .    . ...+++.
T Consensus       235 ~~~~~~~~~~~~g~~~~~~~l~aa~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~  311 (391)
T 3dr4_A          235 MDPNRRYWFPIVGFNYRMTNIQAAIGLAQ---LERVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVR  311 (391)
T ss_dssp             CCTTSTTCCSSCCCBCBCCHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEE
T ss_pred             CCCCCcccccccccccCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCccccCcCCCCCCcceeEEEEEE
Confidence            10            012222232333332   23446677888889999999999888877654  1    1 2235666


Q ss_pred             cCC---CChHHHHHHHHHhcCeEeeCCCCC---CCC---------------CCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          216 FPG---RKSWDVFAEILEKTHITTVPGSGF---GPG---------------GEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       216 l~~---~~~~~~~~~ll~~~gi~v~~g~~~---~~~---------------~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ++.   .+..++...|.++ ||.+.++...   .+.               ..+.+|+++  ..+++|++++++.|++++
T Consensus       312 ~~~~~~~~~~~l~~~L~~~-GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l  390 (391)
T 3dr4_A          312 LGEGLSTTRDQVIKDLDAL-GIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL  390 (391)
T ss_dssp             ECSSCSSCHHHHHHHHHHT-TCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred             ECCccchhHHHHHHHHHHC-CCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence            663   3456666666555 9999987521   110               135789986  459999999999999875

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.84  E-value=5.7e-20  Score=163.37  Aligned_cols=255  Identities=14%  Similarity=0.046  Sum_probs=164.2

Q ss_pred             ccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      .|++..+... +...++..| +++.+|++++ ++.+|++.     .+++++|++++|+||||.+.+   +++|.++|+++
T Consensus       156 ~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~  231 (502)
T 3hbx_A          156 NIVTGANVQVCWEKFARYFEVELKEVKLSEG-YYVMDPQQAVDMVDENTICVAAILGSTLNGEFED---VKLLNDLLVEK  231 (502)
T ss_dssp             EEEEETTCCHHHHHHHHHTTCEEEEECCBTT-BCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCC---HHHHHHHHHHH
T ss_pred             EEEEcCCchHHHHHHHHHcCceeEEEecCCC-cCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccC---HHHHHHHHHHh
Confidence            4555544444 777788889 9999998764 46666443     267889999999999999977   88889999998


Q ss_pred             ------CCEEEEcccCCcccc---CCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccc-cccCCcchHHHH
Q 036024           78 ------GSIIIFDSAYAAYVT---DGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL-LFSSGFPVINDF  147 (272)
Q Consensus        78 ------~~~vi~D~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~-~~~~~~~~~~~~  147 (272)
                            ++++++|++|+++..   .+.......   ...-.++..|.+|.++ .+.++||++..+.. +...+......+
T Consensus       232 ~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~---~~~~D~v~~s~hK~l~-~p~g~G~~~~~~~~~l~~~~~~~~~yl  307 (502)
T 3hbx_A          232 NKETGWDTPIHVDAASGGFIAPFLYPELEWDFR---LPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFHINYL  307 (502)
T ss_dssp             HHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT---STTEEEEEEETTTTTC-CCSSCEEEEESSGGGSCGGGCEEECSS
T ss_pred             hhccCCCCeEEEECCccchhhhhhCcccccccC---CCCceEEEECcccccC-CCCCeEEEEEeCHHHhhHHhccCcccc
Confidence                  999999999986542   221111111   1223367778899875 56678998876543 211100000000


Q ss_pred             Hhhhhh--ccCCc---chHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecC-CCceEEEeecCC--
Q 036024          148 NRIICT--CFNGA---SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGG-INAPYVWAHFPG--  218 (272)
Q Consensus       148 ~~~~~~--~~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~~i~l~~--  218 (272)
                      ......  ...+.   ...++.++...+   +.+.+.++.++..++++++.+.|++++ +++..+ ...+++++.+++  
T Consensus       308 ~~~~~~~~~~~sr~~~~~~a~~~al~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~  384 (502)
T 3hbx_A          308 GADQPTFTLNFSKGSSQVIAQYYQLIRL---GHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSS  384 (502)
T ss_dssp             SSCEEECCSCCSCBSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCS
T ss_pred             cCCCCCccccCCchHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCC
Confidence            000000  00111   233333333333   334557888999999999999999985 888775 567788888864  


Q ss_pred             -CChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          219 -RKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       219 -~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                       .+..++...|.++ ||.+....... ..+...+|+++.  .++++++.+++.|+++
T Consensus       385 ~~~~~~l~~~L~~~-Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~  440 (502)
T 3hbx_A          385 CHTEFEISDMLRRY-GWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKV  440 (502)
T ss_dssp             SCCHHHHHHHHHTT-TCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHhC-CcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence             2334666666555 99875432221 234568999974  4899999999988875

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.84  E-value=2.6e-20  Score=164.17  Aligned_cols=211  Identities=15%  Similarity=0.129  Sum_probs=136.5

Q ss_pred             CceEEEEecCCCcc-ccCCCHHHHHHHHHHHHHcCCEEEEcccCCc-c---------ccCCCCCCccccC----CCCCce
Q 036024           45 RTDIIFFCSPNNPT-GHAATQNQLEQLVEFARNNGSIIIFDSAYAA-Y---------VTDGCPRSIYEIP----GAREVA  109 (272)
Q Consensus        45 ~~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~-~---------~~~~~~~~~~~~~----~~~~~~  109 (272)
                      ++++|++++|+||| |.+++.+++++|+++|++||+++|+|+++.. .         .+.+  .+...+.    ...+  
T Consensus       183 ~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g--~~~~~~~~~~~~~~d--  258 (467)
T 2oqx_A          183 NVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKD--WTIEQITRETYKYAD--  258 (467)
T ss_dssp             GCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTT--SCHHHHHHHHGGGCS--
T ss_pred             ceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccC--ccHHHHhhhhhccCC--
Confidence            78999999999998 8999999999999999999999999977643 1         2222  2222221    1123  


Q ss_pred             EEEecCccccCCC-ccceeEEEeccc-ccccCCcchHHHHHhhh--hhc---cCCcchHHHHHHHHhcccccHHHHHHHH
Q 036024          110 IEISSFSKFSGFT-GVRLGWTVVPEE-LLFSSGFPVINDFNRII--CTC---FNGASNIAQAGGLACLSSEGLEAVHSVV  182 (272)
Q Consensus       110 i~~~s~sK~~g~~-g~r~G~~~~~~~-~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~  182 (272)
                      +++.|+||.+|.| |   ||++++++ ++.     ....+....  ...   ....+..+..++...+.....   ++..
T Consensus       259 ~~~~s~sK~~g~~~G---g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~---~~~~  327 (467)
T 2oqx_A          259 MLAMSAKKDAMVPMG---GLLCMKDDSFFD-----VYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN---LDWL  327 (467)
T ss_dssp             EEEEESSSTTCCSSC---EEEEECSGGGHH-----HHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC---HHHH
T ss_pred             eEEEecccccCCCCc---eEEEecChhHHH-----HHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh---HHHH
Confidence            4578999999866 4   78887776 311     022222221  111   111222222222222221110   2344


Q ss_pred             HHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC----CCC-----hHHHHHHHHHhcCeEeeCCCCC--CC-------
Q 036024          183 DYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP----GRK-----SWDVFAEILEKTHITTVPGSGF--GP-------  244 (272)
Q Consensus       183 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~----~~~-----~~~~~~~ll~~~gi~v~~g~~~--~~-------  244 (272)
                      ++.+++.+++.+.|.++|+.+. +.+++++|+.++    +.+     ...+...|++++||.+.|+..|  +.       
T Consensus       328 ~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~  406 (467)
T 2oqx_A          328 AYRIAQVQYLVDGLEEIGVVCQ-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQ  406 (467)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEE-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSB
T ss_pred             HHHHHHHHHHHHHHHHCCCeee-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceeccccccccccccccccc
Confidence            5567888999999988888877 678889999873    223     2234666646669999985543  11       


Q ss_pred             --CCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          245 --GGEEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       245 --~~~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                        .+.+++|+++.   .+++++++++++|+++
T Consensus       407 ~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~  438 (467)
T 2oqx_A          407 LPCPAELLRLTIPRATYTQTHMDFIIEAFKHV  438 (467)
T ss_dssp             CCCSCCEEEECCCTTTSCHHHHHHHHHHHHHH
T ss_pred             ccCccCeEEEEecCCCCCHHHHHHHHHHHHHH
Confidence              12479999975   7899999999999875

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.83  E-value=4e-19  Score=151.94  Aligned_cols=237  Identities=13%  Similarity=0.030  Sum_probs=154.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      |.|++..+.+. +...+...| +++.+++++++.+.++ +++  .++++++++++|   ||.+.+   +++|.++|+++|
T Consensus        75 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~  148 (375)
T 2fnu_A           75 NEIITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHS  148 (375)
T ss_dssp             CEEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHT
T ss_pred             CEEEECCCccHhHHHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcC
Confidence            56777766555 777777788 9999999866433333 322  257888888766   999987   889999999999


Q ss_pred             CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEec--ccccccCCcchHHHHHhhhhhc
Q 036024           79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVP--EELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +++|+|++|..+.... ...   +....  .+.+.|+|  |.+| +|  +|++++.  +++        .+.+.......
T Consensus       149 ~~li~D~a~~~~~~~~-~~~---~~~~~--~i~~~s~s~~K~~~-~g--~g~~~~~~~~~~--------~~~~~~~~~~~  211 (375)
T 2fnu_A          149 LSFLSDSSHALGSEYQ-NKK---VGGFA--LASVFSFHAIKPIT-TA--EGGAVVTNDSEL--------HEKMKLFRSHG  211 (375)
T ss_dssp             CEEEEECTTCTTCEET-TEE---TTSSS--SEEEEECCTTSSSC-CS--SCEEEEESCHHH--------HHHHHHHTBTT
T ss_pred             CEEEEECccccCCeEC-Cee---ccccC--CeEEEeCCCCCCcc-cc--CceEEEeCCHHH--------HHHHHHHHhcC
Confidence            9999999998643221 111   21112  27778888  9997 46  7888874  334        34443332111


Q ss_pred             c----------------CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC----C-ceEE
Q 036024          155 F----------------NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI----N-APYV  212 (272)
Q Consensus       155 ~----------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~-~~~~  212 (272)
                      .                ...+.+..  +.....   .+++++..++.+++++++.+.|+++ |+++..+.    . ..++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~--a~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~  286 (375)
T 2fnu_A          212 MLKKDFFEGEVKSIGHNFRLNEIQS--ALGLSQ---LKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLY  286 (375)
T ss_dssp             EEESSSSCEEESSCCCBCCCCHHHH--HHHHHH---HTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCE
T ss_pred             CccccccccccccccccCCCCHHHH--HHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEE
Confidence            0                11222222  222222   2345778889999999999999997 88876652    2 3455


Q ss_pred             EeecCC--C-ChHHHHHHHHHhcCeEeeCCCCCCCC---------------------CCCeEEEEcc--CCHHHHHHHHH
Q 036024          213 WAHFPG--R-KSWDVFAEILEKTHITTVPGSGFGPG---------------------GEEYIRISGF--GHRESILEASR  266 (272)
Q Consensus       213 ~i~l~~--~-~~~~~~~~ll~~~gi~v~~g~~~~~~---------------------~~~~~R~s~~--~~~~~i~~~l~  266 (272)
                      ++.++.  . +..++...|. ++||.+..+  |.+.                     ..+++|+++.  .++++++++++
T Consensus       287 ~~~~~~~~~~~~~~l~~~L~-~~gi~v~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~  363 (375)
T 2fnu_A          287 PILMHQKFFTCKKLILESLH-KRGILAQVH--YKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAH  363 (375)
T ss_dssp             EEEECGGGGGGHHHHHHHHH-HTTEECBCC--CCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHH
T ss_pred             EEEeCccccchHHHHHHHHH-HCCCCcccc--ccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHH
Confidence            777763  2 4556666665 559999832  2211                     1267999975  48999999999


Q ss_pred             HHHHh
Q 036024          267 RLEAL  271 (272)
Q Consensus       267 ~l~~~  271 (272)
                      +|+++
T Consensus       364 ~l~~~  368 (375)
T 2fnu_A          364 SVLKT  368 (375)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.83  E-value=1.8e-18  Score=151.25  Aligned_cols=247  Identities=13%  Similarity=0.133  Sum_probs=155.0

Q ss_pred             cccccccCccc-chHHh----cccc-eeEEeecCCCCCcccCCCCC-CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEV----GKYC-NIEYLECGPGNNFFPDLKGT-SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~----~~~g-~~~~~~~~~~~~~~~dl~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +....    +..| +++.++. .  ++.+|++.+ +++++|++++| ||||.+.+   +++|+++|++
T Consensus       151 d~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~--~~~~d~~~i~~~t~~v~i~~p-n~tG~~~~---l~~i~~la~~  223 (438)
T 1wyu_A          151 MGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-E--GGRTPLPEVGEEVGAVVVQNP-NFLGALED---LGPFAEAAHG  223 (438)
T ss_dssp             CEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-B--TTBCCCCCCCTTEEEEEEESS-CTTSBCCC---HHHHHHHHHH
T ss_pred             CEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-c--CCccCHHHhCCCeEEEEEECC-CCCeEEec---HHHHHHHHHH
Confidence            56677665544 54333    3468 9999887 2  235555443 67899999999 99999986   9999999999


Q ss_pred             cCCEEEEccc-CCccccCCCCCCccccCCCCCceEEEecCccccC----CCccceeEEEecccccccCCcch--------
Q 036024           77 NGSIIIFDSA-YAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG----FTGVRLGWTVVPEELLFSSGFPV--------  143 (272)
Q Consensus        77 ~~~~vi~D~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g----~~g~r~G~~~~~~~~~~~~~~~~--------  143 (272)
                      +|+++++|.. .+ +  +. ......+.  .|  ++++| +|.||    +.|.++||+++++++.+......        
T Consensus       224 ~g~~vivd~d~~a-~--g~-~~~~~~~g--~D--~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~  294 (438)
T 1wyu_A          224 AGALFVAVADPLS-L--GV-LKPPGAYG--AD--IAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVE  294 (438)
T ss_dssp             TTCEEEEECCTTG-G--GT-BCCHHHHT--CS--EEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTT
T ss_pred             cCCEEEEEechhh-c--cC-cCCCccCC--CC--EEEEC-CcccCCCccCCCCCeeEEEEcHHHHHhCCCceeccccccC
Confidence            9999996622 21 1  11 01112221  12  66666 66543    44668999999887743321100        


Q ss_pred             -----------HHHHHhhhhhccCC--cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCc
Q 036024          144 -----------INDFNRIICTCFNG--ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINA  209 (272)
Q Consensus       144 -----------~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~  209 (272)
                                 .+.-.+....+...  .+.....++...+...+.+.++++.++++++++++.+.|+++ |+++..+. .
T Consensus       295 ~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~  373 (438)
T 1wyu_A          295 GRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK-P  373 (438)
T ss_dssp             SCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS-S
T ss_pred             CCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC-C
Confidence                       00000111111111  122222111111332233457888999999999999999998 99988753 3


Q ss_pred             eE--EEeecCCCChHHHHHHHHHhcCeEe--eCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          210 PY--VWAHFPGRKSWDVFAEILEKTHITT--VPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       210 ~~--~~i~l~~~~~~~~~~~ll~~~gi~v--~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      .+  +.+..+ .+..++..+|.++ ||.+  .++..|.   .+++|+++.  ++++++++++++|++++
T Consensus       374 ~~~~~~~~~~-~~~~~~~~~L~~~-gi~v~~~~~~~~~---~~~lRis~~~~~t~edi~~~~~~l~~~l  437 (438)
T 1wyu_A          374 FFNEFALALP-KDPEAVRRALAER-GFHGATPVPREYG---ENLALFAATELHEEEDLLALREALKEVL  437 (438)
T ss_dssp             BCSEEEEECS-SCHHHHHHHHHHT-TCCCCEECCTTSC---SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             eEEEEEEeCC-CCHHHHHHHHHHC-CceeccccccccC---CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence            33  334443 3567777777766 9999  6777664   579999975  68999999999998864

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.82  E-value=1.3e-18  Score=150.85  Aligned_cols=240  Identities=14%  Similarity=0.084  Sum_probs=151.5

Q ss_pred             cccccccCccc-ch----HHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LE----DEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~----~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+. ..    ..++..| +++.++.+.-..    +++  .+++|+|++++|+||||.+++   +++|+++|+
T Consensus       122 d~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~----le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~  194 (415)
T 2fq6_A          122 DHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGAD----IVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVR  194 (415)
T ss_dssp             CEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGG----GGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHH----HHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHH
Confidence            55666654333 22    2345678 888887652111    222  267899999999999999997   899999999


Q ss_pred             H--cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccc-eeEEEecccccccCCcchHHHHHhhhh
Q 036024           76 N--NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVR-LGWTVVPEELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        76 ~--~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~  152 (272)
                      +  +|+++++|++|......   .++ .+    +..+++.|++|.+|.+|.+ .||++++++.        .+.+.....
T Consensus       195 ~~~~g~~livD~a~a~~~~~---~p~-~~----g~Div~~S~sK~lg~~g~~~~G~l~~~~~~--------~~~l~~~~~  258 (415)
T 2fq6_A          195 SVVPDAIIMIDNTWAAGVLF---KAL-DF----GIDVSIQAATKYLVGHSDAMIGTAVCNARC--------WEQLRENAY  258 (415)
T ss_dssp             HHCTTCEEEEECTTTTTTSS---CGG-GG----TCSEEEEETTTTTTCSSSCCCEEEEECTTT--------HHHHHHHHH
T ss_pred             hhcCCCEEEEECCCcccccC---Ccc-cc----CCeEEEEeCccccCCCCCceEEEEEeCHHH--------HHHHHHHHH
Confidence            9  99999999999853221   122 22    2238999999999977755 6998888765        455544443


Q ss_pred             hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecC----------------CCceEEEe
Q 036024          153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGG----------------INAPYVWA  214 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~i  214 (272)
                      ......+......+...     .+.+..+.++..++.+.+.+.|++. .+. +..|                ..+..+++
T Consensus       259 ~~G~~~~~~~a~~~~~~-----l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf  333 (415)
T 2fq6_A          259 LMGQMVDADTAYITSRG-----LRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSF  333 (415)
T ss_dssp             HTTCCCCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEE
T ss_pred             hcCCCCCHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEE
Confidence            22222333332222222     2344666777788899999999886 232 2111                14667888


Q ss_pred             ecCCCChHHHHHHHHH---hcCeEeeCCCCCC------------------C-CCCCeEEEEccC--CHHHHHHHHHHHHH
Q 036024          215 HFPGRKSWDVFAEILE---KTHITTVPGSGFG------------------P-GGEEYIRISGFG--HRESILEASRRLEA  270 (272)
Q Consensus       215 ~l~~~~~~~~~~~ll~---~~gi~v~~g~~~~------------------~-~~~~~~R~s~~~--~~~~i~~~l~~l~~  270 (272)
                      .+++....+....+++   ..++.+..|+.+.                  . ...+.+|+|++.  ++++++.+.++|++
T Consensus       334 ~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~  413 (415)
T 2fq6_A          334 VLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR  413 (415)
T ss_dssp             EESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred             EECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence            9975311222333443   3356666664422                  0 124789999743  67778888888876


Q ss_pred             h
Q 036024          271 L  271 (272)
Q Consensus       271 ~  271 (272)
                      +
T Consensus       414 ~  414 (415)
T 2fq6_A          414 I  414 (415)
T ss_dssp             T
T ss_pred             h
Confidence            5

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.82  E-value=3.1e-19  Score=152.67  Aligned_cols=240  Identities=13%  Similarity=0.113  Sum_probs=150.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...++..| +++.++.+.  ++.+|++.+     +++++++   |+||||...+   +++|.++|++
T Consensus        79 d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~---~~~i~~~~~~  150 (374)
T 3uwc_A           79 DEVITCANTFIASVGAIVQAGATPVLVDSEN--GYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD---MPALAKIAKK  150 (374)
T ss_dssp             CEEEEESSSCHHHHHHHHHTTCEEEEECBCT--TSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred             CEEEECCCccHHHHHHHHHcCCEEEEEecCC--CCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC---HHHHHHHHHH
Confidence            56777766655 777788888 999999983  455554432     4666666   8999999877   8899999999


Q ss_pred             cCCEEEEcccCCcccc-CCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           77 NGSIIIFDSAYAAYVT-DGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +|+++|+|++|..+.. ++  ......   .+  +++.|+|  |.+|.+|. .|+++++++.+       .+.+......
T Consensus       151 ~~~~li~D~~~~~g~~~~~--~~~~~~---~d--~~~~s~~~~K~l~~~g~-~g~~~~~~~~~-------~~~~~~~~~~  215 (374)
T 3uwc_A          151 HNLHIVEDACQTILGRIND--KFVGSW---GQ--FACFSLHPLKNLNVWSD-AGVIITHSDEY-------AEKLRLYRNH  215 (374)
T ss_dssp             TTCEEEEECTTCTTCEETT--EETTSS---SS--EEEEECSSSSSSCCSSC-CEEEEESCHHH-------HHHHHHHTBT
T ss_pred             cCCEEEEeCCCccCceeCC--eecccc---cc--EEEEeCCCCCcCCccce-eEEEEeCCHHH-------HHHHHHHHhc
Confidence            9999999999986432 21  111111   12  6777766  99984465 78888876542       3333332210


Q ss_pred             ------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEecCC-CceEEE--eec
Q 036024          154 ------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG--IKVYGGI-NAPYVW--AHF  216 (272)
Q Consensus       154 ------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~-~~~~~~--i~l  216 (272)
                                  .....+..  .++......   +.+++..++.+++.+++++.|.+++  +.+.... .+...|  +.+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~--~aa~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  290 (374)
T 3uwc_A          216 GLINRDVCVEYGINCRMDTI--QAVIANRLM---NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVL  290 (374)
T ss_dssp             TEEETTEESSCCCBCBCCHH--HHHHHHHHG---GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEE
T ss_pred             CccccCccccccccCCCCHH--HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEE
Confidence                        11111222  222222221   2346677888889999999999874  6664322 222221  222


Q ss_pred             CCCChHHHHHHHHHhcCeEeeCCCCCC----C---------C--------CCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          217 PGRKSWDVFAEILEKTHITTVPGSGFG----P---------G--------GEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       217 ~~~~~~~~~~~ll~~~gi~v~~g~~~~----~---------~--------~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ...+..++...|.++ ||.+.++....    +         .        ..+.+|+++  ..+++|++++++.|++++
T Consensus       291 ~~~~~~~l~~~L~~~-gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l  368 (374)
T 3uwc_A          291 RVKYRDQLFQYLKDN-GIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFY  368 (374)
T ss_dssp             EETTHHHHHHHHHHT-TBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHH
T ss_pred             EcCCHHHHHHHHHHC-CCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHH
Confidence            222455666665555 99998875211    0         0        026799986  458999999999998763

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.82  E-value=1.8e-19  Score=156.56  Aligned_cols=240  Identities=16%  Similarity=0.101  Sum_probs=156.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...+...| +++.++.+++ ++.+|++.     .+++++|+++   ||||...+   +++|.++|++
T Consensus        83 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~~~~~  155 (418)
T 2c81_A           83 DEVIVPSLTWIATATAVLNVNALPVFVDVEAD-TYCIDPQLIKSAITDKTKAIIPV---HLFGSMAN---MDEINEIAQE  155 (418)
T ss_dssp             CEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHGGGCCTTEEEECCB---CCTTCCCC---HHHHHHHHHH
T ss_pred             CEEEECCCccHhHHHHHHHcCCEEEEEecCCC-CCCcCHHHHHHhhCCCCeEEEEe---CCcCCccc---HHHHHHHHHH
Confidence            56777766555 777778888 9999999763 45555332     2577887764   58998755   8999999999


Q ss_pred             cCCEEEEcccCCccc-cCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEec-ccccccCCcchHHHHHhhhh
Q 036024           77 NGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~  152 (272)
                      +|+++|+|++|..+. +++.  ++..+   .+  +.+.||  ||.+|. | |+||++++ +++        .+.+.....
T Consensus       156 ~~~~li~D~a~~~~~~~~~~--~~~~~---~~--~~~~s~s~~K~~~~-g-~~g~~~~~~~~l--------~~~~~~~~~  218 (418)
T 2c81_A          156 HNLFVIEDCAQSHGSVWNNQ--RAGTI---GD--IGAFSCQQGKVLTA-G-EGGIIVTKNPRL--------FELIQQLRA  218 (418)
T ss_dssp             TTCEEEEECTTCTTCEETTE--ETTSS---SS--EEEEECCTTSSSCS-S-SCEEEEESCHHH--------HHHHHHHHB
T ss_pred             CCCEEEEECcccccCccCCE--ecccc---cc--eEEEeccCCcccCC-C-CeEEEEECCHHH--------HHHHHHHHH
Confidence            999999999999765 4332  12122   12  667777  999985 8 99999986 444        333433221


Q ss_pred             hcc------------CC-----cc--------hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec-
Q 036024          153 TCF------------NG-----AS--------NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG-  205 (272)
Q Consensus       153 ~~~------------~~-----~~--------~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-  205 (272)
                      ...            ..     ..        ...+. +...   ...+++++..++.+++++++.+.|.++ |+++.. 
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a-a~~~---~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~  294 (418)
T 2c81_A          219 DSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQS-AILL---DQLQELDDKNAIREKNAMFLNDALSKIDGIKVMKR  294 (418)
T ss_dssp             TTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHH-HHHH---HHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCC
T ss_pred             hCccccccccccccchhhccccccccCcCCCcCHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCC
Confidence            110            00     00        11111 1111   111234667788888899999999887 888874 


Q ss_pred             CCC-ceE----EEeecC-----CCChHHHHHHHHHhcCeE---eeCCCCCCC--------------------------CC
Q 036024          206 GIN-APY----VWAHFP-----GRKSWDVFAEILEKTHIT---TVPGSGFGP--------------------------GG  246 (272)
Q Consensus       206 ~~~-~~~----~~i~l~-----~~~~~~~~~~ll~~~gi~---v~~g~~~~~--------------------------~~  246 (272)
                      +++ +..    +.+.++     +.+..++...|.+++||.   +.++.....                          ..
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (418)
T 2c81_A          295 PPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLH  374 (418)
T ss_dssp             CTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCC
T ss_pred             CCCCcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCC
Confidence            333 222    226666     345667777776666999   887752210                          00


Q ss_pred             --------CCeEEEEc--cC-CHHHHHHHHHHHHHh
Q 036024          247 --------EEYIRISG--FG-HRESILEASRRLEAL  271 (272)
Q Consensus       247 --------~~~~R~s~--~~-~~~~i~~~l~~l~~~  271 (272)
                              .+.+|+++  .. +++|++++++.|+++
T Consensus       375 ~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~  410 (418)
T 2c81_A          375 YPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAEL  410 (418)
T ss_dssp             CHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHH
Confidence                    15899997  55 999999999999875

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.81  E-value=9.8e-19  Score=152.17  Aligned_cols=248  Identities=17%  Similarity=0.121  Sum_probs=145.6

Q ss_pred             cccccccCccc-chH----Hhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LED----EVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~----~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..+.+. +..    .+...| +++.++.+.-..+.--+  .+++++|++++|+||||.+++   +++|+++|+++
T Consensus       122 d~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai--~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~  196 (430)
T 3ri6_A          122 DSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHAC--DETTKLLFLETISNPQLQVAD---LEALSKVVHAK  196 (430)
T ss_dssp             CEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTT
T ss_pred             CEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhh--CCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc
Confidence            56666665554 444    556788 99998876111111102  268999999999999999987   88999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEe--ccccccc--CCcc---------hH
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVV--PEELLFS--SGFP---------VI  144 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~--~~~~~~~--~~~~---------~~  144 (272)
                      |+++|+|++|.....    .......    ..+++.|+||.+|.+|..+|.+++  .+.....  ....         ++
T Consensus       197 g~~livD~a~~~~~~----~~~~~~g----~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i  268 (430)
T 3ri6_A          197 GIPLVVDTTMTPPYL----LEAKRLG----VDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFL  268 (430)
T ss_dssp             TCCEEEECTTSCTTT----CCGGGGT----CSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHH
T ss_pred             CCEEEEECCCccccc----CChHHcC----CEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHH
Confidence            999999999985332    1112221    238999999999866655555554  2211100  0000         01


Q ss_pred             HHHHh-hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecCC--------------
Q 036024          145 NDFNR-IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGGI--------------  207 (272)
Q Consensus       145 ~~~~~-~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~--------------  207 (272)
                      ..... .........+.....     +...+.+.+..+.++..++++.+.+.|++. +++ +..|.              
T Consensus       269 ~~~~~~~~~~~g~~~~~~~a~-----l~l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~  343 (430)
T 3ri6_A          269 YKARKEVFQNLGPSLSPHNAY-----LQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQF  343 (430)
T ss_dssp             HHHHHTHHHHHCCCCCHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHC
T ss_pred             HHHHHHHHHhcCCCCCHHHHH-----HHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhC
Confidence            11111 111122222322221     111233555667778889999999999887 554 44332              


Q ss_pred             --CceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCC---------------------CCCCeEEEEccCCHHHHHHH
Q 036024          208 --NAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGP---------------------GGEEYIRISGFGHRESILEA  264 (272)
Q Consensus       208 --~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------------------~~~~~~R~s~~~~~~~i~~~  264 (272)
                        +|+++|+.+++......+...++..++.+.+|..++.                     ..++.+|+|+..  |+.+.+
T Consensus       344 g~Gg~~lsf~l~~~~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~--E~~~dl  421 (430)
T 3ri6_A          344 RYAGSILTFELESKEASYRFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI--EEIEDL  421 (430)
T ss_dssp             SSCCSEEEEECSSHHHHHHHHHHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS--SCHHHH
T ss_pred             CCCceEEEEEECCHHHHHHHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHH
Confidence              3349999998322222333334455677777776651                     136789999854  333334


Q ss_pred             HHHHHHh
Q 036024          265 SRRLEAL  271 (272)
Q Consensus       265 l~~l~~~  271 (272)
                      ++.|+++
T Consensus       422 ~~dl~~a  428 (430)
T 3ri6_A          422 KEDILQA  428 (430)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            4444443

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.80  E-value=8.6e-18  Score=148.01  Aligned_cols=233  Identities=14%  Similarity=0.094  Sum_probs=150.0

Q ss_pred             eEEeecCCCCCcccCCCCC------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCCC
Q 036024           25 IEYLECGPGNNFFPDLKGT------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCPR   97 (272)
Q Consensus        25 ~~~~~~~~~~~~~~dl~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~~   97 (272)
                      +++++++++ .+.+|++++      +++|+|++++++||+.  .+   +++|.++|+++|+++++|++|. ++...+...
T Consensus       178 ~~~~~vd~~-~~~iD~d~le~~l~~~~~klIi~~~s~~~~~--~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~  251 (490)
T 2a7v_A          178 SMPYKLNPK-TGLIDYNQLALTARLFRPRLIIAGTSAYARL--ID---YARMREVCDEVKAHLLADMAHISGLVAAKVIP  251 (490)
T ss_dssp             ---CCBCTT-TCSBCHHHHHHHHHHHCCSEEEECCSSCCSC--CC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSC
T ss_pred             EEecccccc-cCCcCHHHHHHHHhhcCCcEEEEcCCCCCCc--cc---HHHHHHHHHHcCCEEEEccccccccccCCcCC
Confidence            445555544 455664432      4689998888898853  34   8999999999999999999986 334343222


Q ss_pred             CccccCCCCCceEEEecCccccCCCccceeEEEecccccccC-------CcchHHHHHhhhhhcc-CCcchHHHHHHHHh
Q 036024           98 SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS-------GFPVINDFNRIICTCF-NGASNIAQAGGLAC  169 (272)
Q Consensus        98 ~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~  169 (272)
                      ....  . .|  +++.|+||+++  |.|.|++++++++....       ...+...+........ .+++.....++..+
T Consensus       252 ~~~~--~-aD--iv~~S~hK~l~--Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~A  324 (490)
T 2a7v_A          252 SPFK--H-AD--IVTTTTHKTLR--GARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVA  324 (490)
T ss_dssp             CGGG--T-CS--EEEEESSGGGC--SCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHH
T ss_pred             CCCC--C-CC--EEEECCcccCc--cccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHH
Confidence            2221  1 12  88899999884  45679999987632100       0012444544443332 22344434444444


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCC--CChHHHHHHHHHhcCeEeeCCCCCC---
Q 036024          170 LSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPG--RKSWDVFAEILEKTHITTVPGSGFG---  243 (272)
Q Consensus       170 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~--~~~~~~~~~ll~~~gi~v~~g~~~~---  243 (272)
                      +........++..+++.++++++.+.|.+.|+++.. +.+.+++|+.+..  .+. +.+.++|++.||.+..+..++   
T Consensus       325 l~~~~~~~~~~~~~~~~~na~~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g~~~-~~~~~~L~~~GI~v~~~~~p~d~~  403 (490)
T 2a7v_A          325 LKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDG-ARAERVLELVSITANKNTCPGDRS  403 (490)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTCCH-HHHHHHHHHTTEECEEECCTTCCC
T ss_pred             HHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCcEEecCCCCCeEEEEEeCCCCCCH-HHHHHHHHhCCeEEecCccCCCCC
Confidence            442222344788899999999999999999999865 3456789999863  344 445666677899998654333   


Q ss_pred             CCCCCeEEEEc------cCCHHHHHHHHHHHHHh
Q 036024          244 PGGEEYIRISG------FGHRESILEASRRLEAL  271 (272)
Q Consensus       244 ~~~~~~~R~s~------~~~~~~i~~~l~~l~~~  271 (272)
                      +..++.+|++.      ..+++|++++.+.|.++
T Consensus       404 p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~  437 (490)
T 2a7v_A          404 AITPGGLRLGAPALTSRQFREDDFRRVVDFIDEG  437 (490)
T ss_dssp             SSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCCceEecccccccCCCCHHHHHHHHHHHHHH
Confidence            33467899974      23789999999888765

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.80  E-value=1.1e-18  Score=154.57  Aligned_cols=242  Identities=8%  Similarity=-0.074  Sum_probs=154.5

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCc------eEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRT------DIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII   82 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~------~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi   82 (272)
                      +...++..| +++.+|++.  ++.+|++.+     +++      .++++++|+||||.+-+   +++|+++|+++|++++
T Consensus       195 ~~~~~~~~G~~v~~v~~d~--~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~---l~~I~~la~~~~~~lh  269 (486)
T 1js3_A          195 VERAGLIGGVKLKAIPSDG--KFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN---LLEVGPICHEEDIWLH  269 (486)
T ss_dssp             HHHHHHHHTCEEEEECCCT--TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHTTCEEE
T ss_pred             HHHHHHhCCCceEEeecCC--CCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCC---HHHHHHHHHHcCCEEE
Confidence            677778888 999999863  555664442     233      37888899999998854   9999999999999999


Q ss_pred             EcccCCccccCC-CCCCc-cccCCCCCceEEEecCccccCCCccceeEEEeccccc-ccCCcchHHHHHhhhh-------
Q 036024           83 FDSAYAAYVTDG-CPRSI-YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL-FSSGFPVINDFNRIIC-------  152 (272)
Q Consensus        83 ~D~~~~~~~~~~-~~~~~-~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~-~~~~~~~~~~~~~~~~-------  152 (272)
                      +|++|+.+.... ..... ..+.+ .+  .+..+++|.++.| .++|+++++++.. .+.+......+.....       
T Consensus       270 vD~a~g~~~~~~~~~~~~~~g~~~-ad--si~~~~hK~~~~p-~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~  345 (486)
T 1js3_A          270 VDAAYAGSAFICPEFRHLLNGVEF-AD--SFNFNPHKWLLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITD  345 (486)
T ss_dssp             EECTTGGGGGGSTTTGGGGTTGGG-CS--EEEECHHHHSSCC-SSCEEEEESCHHHHHGGGC------------CCSCCC
T ss_pred             EehhhHHHHHHCHHHHHHhcCccc-cC--eeEEchhhhcCCC-cceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCC
Confidence            999998755321 12111 11211 12  5567889999854 7899999976541 1111100011110000       


Q ss_pred             ------hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC--ChHH
Q 036024          153 ------TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR--KSWD  223 (272)
Q Consensus       153 ------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~--~~~~  223 (272)
                            ........+.+.++...+   +.++++++.++..++++++.+.|++. |+++..+....++.+.+++.  ...+
T Consensus       346 ~~~~~~~~~rr~~~~~~~~al~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~  422 (486)
T 1js3_A          346 YRHWQLPLGRRFRSLKMWFVFRMY---GVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSDGLNEA  422 (486)
T ss_dssp             GGGSSSCSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSCHHHHHH
T ss_pred             ccccCCCCCCchhHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEEEecChHHHHHH
Confidence                  000112334444444443   34567888999999999999999987 89887643455555666532  2456


Q ss_pred             HHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          224 VFAEILEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       224 ~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                      +..+|.++ |+.+.++..+  .+.+++|+++.   ++++++++++++|+++
T Consensus       423 l~~~L~~~-g~~~~~~~~~--~~~~~lRi~~~~~~~t~~di~~~~~~l~~~  470 (486)
T 1js3_A          423 LLERINSA-RKIHLVPCRL--RGQFVLRFAICSRKVESGHVRLAWEHIRGL  470 (486)
T ss_dssp             HHHHHHHH-TSCBCEEEEE--TTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhc-CCEEEEEEEE--CCEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            77777766 6543332223  23678999963   4789999999998865

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.79  E-value=8e-18  Score=149.49  Aligned_cols=243  Identities=12%  Similarity=0.077  Sum_probs=151.7

Q ss_pred             chHHhccc--c--eeEEeecCCCCCcccCCCCC-----C----Cce--EEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024           15 LEDEVGKY--C--NIEYLECGPGNNFFPDLKGT-----S----RTD--IIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus        15 ~~~~~~~~--g--~~~~~~~~~~~~~~~dl~~~-----~----~~~--~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      +...++..  |  +++.+|.++  ++..|++.+     +    .++  ++++++++||||..-+   +++|+++|+++|+
T Consensus       215 ~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~---l~~I~~l~~~~~~  289 (497)
T 2qma_A          215 VQKSASWMGLGEKAVMTVDANA--DGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD---LDFIADMAVKHDM  289 (497)
T ss_dssp             HHHHHHHTTSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTC
T ss_pred             HHHHHHHcCCCcccEEEEecCC--CCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC---HHHHHHHHHHcCC
Confidence            45454444  3  588899864  455554442     1    234  7777899999999866   8999999999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh--hcc--
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC--TCF--  155 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--  155 (272)
                      ++++|++|+.+........  .+.+.....+++.|++|.++.| .++|+++++++...+.+......+.....  ...  
T Consensus       290 ~l~vD~a~~~~~~~~~~~~--~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~  366 (497)
T 2qma_A          290 WMHVDGAYGGALILSSHKS--RLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLHHADYLNREHDELPNLVD  366 (497)
T ss_dssp             EEEEEETTGGGGGGSTTGG--GGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC-----------------
T ss_pred             EEEEehhhhHHHHhCcchH--hhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcCCchhcCCccccCCCccc
Confidence            9999999997665432111  1222212226778999988755 68999998766521111110000000000  000  


Q ss_pred             ------CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCC------hH
Q 036024          156 ------NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRK------SW  222 (272)
Q Consensus       156 ------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~------~~  222 (272)
                            .....+.+.++.+.+   +.+.++++.++..++++++.+.|+++ ++++..+..+.++++.+.+..      ..
T Consensus       367 ~~~~~~r~~~al~~~~~l~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~  443 (497)
T 2qma_A          367 KSIATTKRFDALKVFMTMQNV---GPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLDELNK  443 (497)
T ss_dssp             ---CCSCCCTHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHHHHHH
T ss_pred             cCCCCCCchhHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCccCHHHHHH
Confidence                  000122233333333   34566888899999999999999987 888865445667777775321      12


Q ss_pred             HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc---cCCHHHHHHHHHHHHHh
Q 036024          223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISG---FGHRESILEASRRLEAL  271 (272)
Q Consensus       223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~---~~~~~~i~~~l~~l~~~  271 (272)
                      ++...+.++ |+.+.++..+  .+.+++|+++   .++++++++++++|+++
T Consensus       444 ~l~~~l~~~-G~~~~~~~~~--~g~~~lRis~~~~~~t~edi~~~~~~l~~~  492 (497)
T 2qma_A          444 ALRLEALTR-GIAVLGETIV--DGKTALKFTILNPCLTTSDFESLLSKINML  492 (497)
T ss_dssp             HHHHHHHHH-TSCBCEEEEE--TTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhC-CCEEEEeeEE--CCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            444555555 8887654333  2356899986   46899999999999875

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.79  E-value=1.5e-18  Score=148.49  Aligned_cols=240  Identities=15%  Similarity=0.091  Sum_probs=149.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...++..| +++.++.+++ ++.+|++.+     +++++++   |+||||...+   +++|.++|++
T Consensus        77 d~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~---l~~i~~l~~~  149 (373)
T 3frk_A           77 DEVIVPSNTFIATALAVSYTGAKPIFVEPDIR-TYNIDPSLIESAITEKTKAII---AVHLYGQPAD---MDEIKRIAKK  149 (373)
T ss_dssp             CEEEEETTSCTHHHHHHHHHSCEEEEECEETT-TTEECGGGTGGGCCTTEEEEE---EECCTTCCCC---HHHHHHHHHH
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEEecccc-ccCcCHHHHHHhcCCCCeEEE---EECCCcCccc---HHHHHHHHHH
Confidence            56666666555 667777888 9999999855 455664442     5677777   6789999876   8899999999


Q ss_pred             cCCEEEEcccCCcccc-CCCCCCccccCCCCCceEEEecCc--cccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           77 NGSIIIFDSAYAAYVT-DGCPRSIYEIPGAREVAIEISSFS--KFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +|+++|+|++|+.+.. ++.  .+...   .+  +.+.|||  |.+|.+| +.|+++++++.+       .+.+......
T Consensus       150 ~~~~li~D~a~~~g~~~~~~--~~~~~---~d--~~~~S~~~~K~l~~~g-~gg~~~~~~~~~-------~~~~~~~~~~  214 (373)
T 3frk_A          150 YNLKLIEDAAQAHGSLYKGM--KVGSL---GD--AAGFSFYPAKNLGSLG-DGGAVVTNDKDL-------AEKIKALSNY  214 (373)
T ss_dssp             HTCEEEEECTTCTTCEETTE--ETTSS---SS--EEEEECCTTSSSCCSS-SCEEEEESCHHH-------HHHHHHHHBT
T ss_pred             cCCEEEEECCcccCCEECCE--ecccc---cc--EEEEeCcCCCccCccc-eeEEEEeCCHHH-------HHHHHHHHhc
Confidence            9999999999985332 221  11111   22  7777877  9887325 378888876542       3333332221


Q ss_pred             c------------cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC-CceEEE--eecCC
Q 036024          154 C------------FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI-NAPYVW--AHFPG  218 (272)
Q Consensus       154 ~------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~--i~l~~  218 (272)
                      .            ....+.+..  +.....   .+.+++..++.+++.+++.+.|.++++.+.... .+...|  +.+..
T Consensus       215 g~~~~~~~~~~g~~~~~~~~~a--a~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  289 (373)
T 3frk_A          215 GSEKKYHHIYKGFNSRLDELQA--GFLRVK---LKYLDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRS  289 (373)
T ss_dssp             TCSBTTBCCSCCCBCCCCHHHH--HHHHHH---HHTHHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEE
T ss_pred             CcccCCccccccccCCCCHHHH--HHHHHH---HHHHHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEe
Confidence            1            111222222  222222   133466778888888999999988775443221 121111  22222


Q ss_pred             CChHHHHHHHHHhcCeEeeCCCCCCC------------CC---------CCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          219 RKSWDVFAEILEKTHITTVPGSGFGP------------GG---------EEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       219 ~~~~~~~~~ll~~~gi~v~~g~~~~~------------~~---------~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      .+..++...|.++ ||.+.++.....            .+         .+.+|+++  ..|++|++++++.|+++
T Consensus       290 ~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~  364 (373)
T 3frk_A          290 EKRDELQKYLNNN-GIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAW  364 (373)
T ss_dssp             SSHHHHHHHHHHT-TBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHC-CCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence            2455666665555 999987652110            00         16799997  45999999999999875

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.78  E-value=2.8e-17  Score=140.35  Aligned_cols=237  Identities=16%  Similarity=0.092  Sum_probs=152.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----CCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...+...| +++.++++++ .+.+|++.+     +++++|+   |+||||...+   +++|.++|++
T Consensus        76 d~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~---~~~i~~la~~  148 (367)
T 3nyt_A           76 DEVITPGFTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQCAD---FDAINAIASK  148 (367)
T ss_dssp             CEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred             CEEEECCCccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccChhh---HHHHHHHHHH
Confidence            56677666655 777778888 9999999876 355554432     5677766   7889998766   8999999999


Q ss_pred             cCCEEEEcccCCccc-cCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           77 NGSIIIFDSAYAAYV-TDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +|+++|+|++|.... +.+.  .+..+.     .+++.||  +|.+|.+|. .|+++.+++.+       .+.+......
T Consensus       149 ~~~~li~D~a~~~g~~~~~~--~~~~~~-----di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l-------~~~~~~~~~~  213 (367)
T 3nyt_A          149 YGIPVIEDAAQSFGASYKGK--RSCNLS-----TVACTSFFPSAPLGCYGD-GGAIFTNDDEL-------ATAIRQIARH  213 (367)
T ss_dssp             TTCCBEEECTTTTTCEETTE--ETTSSS-----SEEEEECCTTSSSCCSSC-CEEEEESCHHH-------HHHHHHHTBT
T ss_pred             cCCEEEEECccccCCeECCe--eccCCC-----CEEEEECCCCCcCCCcCc-eeEEEeCCHHH-------HHHHHHHHhc
Confidence            999999999998532 2221  111121     2778886  899985476 88988865542       3444433221


Q ss_pred             ------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCc-----eEEEeec
Q 036024          154 ------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINA-----PYVWAHF  216 (272)
Q Consensus       154 ------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-----~~~~i~l  216 (272)
                                  .....+.+...++...+.     .+++..++.+++.+++++.|+++++.+.....+     ..+.+.+
T Consensus       214 g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~-----~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~  288 (367)
T 3nyt_A          214 GQDRRYHHIRVGVNSRLDTLQAAILLPKLE-----IFEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRM  288 (367)
T ss_dssp             TEEETTEECSCCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEEC
T ss_pred             CCCcCceeeccCcCCCccHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEe
Confidence                        123344444444443332     235566777888899999999887655432211     2234444


Q ss_pred             CCCChHHHHHHHHHhcCeEeeCCCCCC-------C-C----------CCCeEEEEcc--CCHHHHHHHHHHHHH
Q 036024          217 PGRKSWDVFAEILEKTHITTVPGSGFG-------P-G----------GEEYIRISGF--GHRESILEASRRLEA  270 (272)
Q Consensus       217 ~~~~~~~~~~~ll~~~gi~v~~g~~~~-------~-~----------~~~~~R~s~~--~~~~~i~~~l~~l~~  270 (272)
                      +  +..++...|.++ ||.+.++....       . .          ....+|+++.  .+++|+++.++.|++
T Consensus       289 ~--~~~~l~~~L~~~-GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~  359 (367)
T 3nyt_A          289 D--NRESVQASLKAA-GVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN  359 (367)
T ss_dssp             S--SHHHHHHHHHHH-TCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred             C--CHHHHHHHHHHC-CCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence            4  455556655555 99998764311       0 0          0346899873  489999999999875

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.77  E-value=1.5e-17  Score=143.62  Aligned_cols=228  Identities=14%  Similarity=0.091  Sum_probs=142.4

Q ss_pred             cccccccCccc-chHH-----hcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDE-----VGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~-----~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. ....     +...| +++.++.+.-..+.-.+  .+++++|++.+|+||||.+++   +++|+++|++
T Consensus       106 d~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i--~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~  180 (400)
T 3nmy_A          106 SHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAI--RADTKMVWIETPTNPMLKLVD---IAAIAVIARK  180 (400)
T ss_dssp             CEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHh--ccCCCEEEEECCCCCCCeeec---HHHHHHHHHH
Confidence            56666666554 3333     33457 88888875211111112  268899999999999999997   9999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeE--EEecccccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGW--TVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~--~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +|+++|+|++|.......   ++ .+    +..+++.|+||.+|.+|.++|+  ++..++.+       .+.+.......
T Consensus       181 ~g~~livDe~~~~~~~~~---~~-~~----g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~-------~~~l~~~~~~~  245 (400)
T 3nmy_A          181 HGLLTVVDNTFASPMLQR---PL-SL----GADLVVHSATKYLNGHSDMVGGIAVVGDNAEL-------AEQMAFLQNSI  245 (400)
T ss_dssp             TTCEEEEECTTTHHHHCC---GG-GG----TCSEEEEETTTTTTCSSSCCCEEEEECSCHHH-------HHHHHHHHHHH
T ss_pred             cCCEEEEECCCcccccCC---hh-hc----CCcEEEecCccccCCCCCcceeEEEEeCCHHH-------HHHHHHHHHhc
Confidence            999999999998533221   11 12    2238999999999877777765  44444331       45555555444


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-EecC----------------CCceEEEeec
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK-VYGG----------------INAPYVWAHF  216 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~i~l  216 (272)
                      ....++....++.+.++     .+..+.++..++++.+.+.|++. .+. +..|                ..|.++++.+
T Consensus       246 g~~~~~~~a~~~l~~l~-----~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l  320 (400)
T 3nmy_A          246 GGVQGPFDSFLALRGLK-----TLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVL  320 (400)
T ss_dssp             CCBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEE
T ss_pred             CCCCCHHHHHHHHHhHh-----HHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEe
Confidence            44456555554444443     23556677889999999999876 333 3222                2367899999


Q ss_pred             CCC-ChHHHHHHHHHhcCeEeeCCCCCCC---------------------CCCCeEEEEccC
Q 036024          217 PGR-KSWDVFAEILEKTHITTVPGSGFGP---------------------GGEEYIRISGFG  256 (272)
Q Consensus       217 ~~~-~~~~~~~~ll~~~gi~v~~g~~~~~---------------------~~~~~~R~s~~~  256 (272)
                      ++. .....+...++..++.+..|..++.                     ..++.+|+|+..
T Consensus       321 ~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl  382 (400)
T 3nmy_A          321 KGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGI  382 (400)
T ss_dssp             TTHHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS
T ss_pred             CCcHHHHHHHHHcCCcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCc
Confidence            741 1122222233444555555544320                     125789999865

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.76  E-value=1.6e-17  Score=143.36  Aligned_cols=236  Identities=16%  Similarity=0.115  Sum_probs=148.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCC-----C---CceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S---RTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..+.+. +...+...| +++.++++.  ++.+|++.+     +   +++++++++   |||...+   +++|.++
T Consensus        73 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l  144 (394)
T 1o69_A           73 DIVLASSFTFIASVAPICYLKAKPVFIDCDE--TYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEI  144 (394)
T ss_dssp             CEEEEESSSCGGGTHHHHHTTCEEEEECBCT--TSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHH
T ss_pred             CEEEECCCccHHHHHHHHHcCCEEEEEEeCC--CCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHH
Confidence            56777766555 777778888 999999973  455554331     2   689999985   8997655   9999999


Q ss_pred             HHHcCCEEEEcccCC-ccccCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEec-ccccccCCcchHHHHHh
Q 036024           74 ARNNGSIIIFDSAYA-AYVTDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVP-EELLFSSGFPVINDFNR  149 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~-~~~~~~~~~~~~~~~~~  149 (272)
                      |+++|+++|+|++|. ++.+.+..  ...+   .+  +.+.|+  +|.+  +|.|+||++++ +++        .+.+..
T Consensus       145 ~~~~~~~li~Dea~~~g~~~~~~~--~~~~---~~--~~~~s~s~~K~l--~~~~~G~~~~~~~~l--------~~~l~~  207 (394)
T 1o69_A          145 CKENDIVLIEDAAEALGSFYKNKA--LGTF---GE--FGVYSYNGNKII--TTSGGGMLIGKNKEK--------IEKARF  207 (394)
T ss_dssp             HHHTTCEEEEECTTCTTCEETTEE--TTSS---SS--EEEEECCTTSSS--CCSSCEEEEESCHHH--------HHHHHH
T ss_pred             HHHcCCEEEEECcCcccceeCCcc--cccc---cC--cEEEEEeCCccC--CCCCceEEEECCHHH--------HHHHHH
Confidence            999999999999998 44443321  1111   12  445555  5655  45689999996 455        444443


Q ss_pred             hhhhccCC--------------cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC----Cce-
Q 036024          150 IICTCFNG--------------ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI----NAP-  210 (272)
Q Consensus       150 ~~~~~~~~--------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~-  210 (272)
                      ........              ++.+...++...     .+++++..++++++++++.+.|.++ +++.++.    .++ 
T Consensus       208 ~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-----l~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~  281 (394)
T 1o69_A          208 YSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQ-----MEVLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRW  281 (394)
T ss_dssp             HTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHH-----HTTHHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCS
T ss_pred             HHHhccccCccccccccCcccCcCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeE
Confidence            32211100              122222222111     1235667889999999999999987 6665542    122 


Q ss_pred             EEEeecCCC----------------------ChHHHHHHHHHhcCeEeeCCCCCC---CCCC---------------CeE
Q 036024          211 YVWAHFPGR----------------------KSWDVFAEILEKTHITTVPGSGFG---PGGE---------------EYI  250 (272)
Q Consensus       211 ~~~i~l~~~----------------------~~~~~~~~ll~~~gi~v~~g~~~~---~~~~---------------~~~  250 (272)
                      ++++.++..                      +..++...|. ++||.++++..+.   +.-.               ..+
T Consensus       282 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  360 (394)
T 1o69_A          282 LSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLK-NKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGI  360 (394)
T ss_dssp             SEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHH-HTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEE
T ss_pred             EEEEEecchhhccccccccccccccccccccCHHHHHHHHH-HcCCcccccCCccccchhhhccCCCCChHHHHHhcCeE
Confidence            466777632                      3445555554 5599999985431   1000               234


Q ss_pred             EEEc--cCCHHHHHHHHHHHHHh
Q 036024          251 RISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       251 R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      |+..  ..+++|++++++.|+++
T Consensus       361 ~~~~~~~~t~edi~~~~~~l~~~  383 (394)
T 1o69_A          361 CLPSGTAMSKDDVYEISKLILKS  383 (394)
T ss_dssp             EECCCTTCCHHHHHHHHHHHHHH
T ss_pred             EccCCCCCCHHHHHHHHHHHHHH
Confidence            4442  46899999999999875

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.76  E-value=2.5e-17  Score=146.52  Aligned_cols=244  Identities=9%  Similarity=0.002  Sum_probs=152.6

Q ss_pred             chHHhcccc----eeEEeecCCCCCcccCCCCC-----C------CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024           15 LEDEVGKYC----NIEYLECGPGNNFFPDLKGT-----S------RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus        15 ~~~~~~~~g----~~~~~~~~~~~~~~~dl~~~-----~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      +...++..|    +++.+|.++  ++..|++.+     +      ++++|++++|+||||.+.+   +++|+++|+++|+
T Consensus       202 ~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g~  276 (504)
T 2okj_A          202 IKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYNL  276 (504)
T ss_dssp             HHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHHTC
T ss_pred             HHHHHHHcCCCcccEEEEecCC--CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCC
Confidence            555555443    578888864  455553331     2      5789999999999999866   8999999999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccc-ccccCCcchHHHHHhh--------
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE-LLFSSGFPVINDFNRI--------  150 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~-~~~~~~~~~~~~~~~~--------  150 (272)
                      ++++|++|+.+........ ..+.+....-++..+++|.++.| .++|+++++++ .+..........+...        
T Consensus       277 ~lhvD~a~~~~~~~~~~~~-~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  354 (504)
T 2okj_A          277 WLHVDAAWGGGLLMSRKHR-HKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSY  354 (504)
T ss_dssp             EEEEEETTGGGGGGCTTTG-GGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGG
T ss_pred             EEEEehhhhhHHHhCHhhH-hhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCCcccccCcC
Confidence            9999999987665321110 11221111127778999999845 68999999874 4210000000000000        


Q ss_pred             --hh---hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec---CCCceEEEeecCCC--
Q 036024          151 --IC---TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG---GINAPYVWAHFPGR--  219 (272)
Q Consensus       151 --~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~---~~~~~~~~i~l~~~--  219 (272)
                        ..   ........+.+.++.+.+.   .+.++++.++..++++++.+.|++. |+++..   +..+.+++...+..  
T Consensus       355 ~~~~~~~~~~rr~~~l~~~a~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~  431 (504)
T 2okj_A          355 DTGDKAIQCGRHVDIFKFWLMWKAKG---TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLR  431 (504)
T ss_dssp             CCGGGSSCSSCBCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGS
T ss_pred             CcccCCCCCCCCccHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCcccc
Confidence              00   0000113455555555553   3556888899999999999999987 888875   55566655444421  


Q ss_pred             --------------ChHHHHHHHHHhcCe-EeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          220 --------------KSWDVFAEILEKTHI-TTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       220 --------------~~~~~~~~ll~~~gi-~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                                    ...++...|.++ |+ .+.++ .+. +..+++|+++.   ++++++++++++|+++
T Consensus       432 ~~~~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~-~~~-~~~~~lRis~~~~~~t~edi~~~~~~l~~~  498 (504)
T 2okj_A          432 GVPDSPQRREKLHKVAPKIKALMMES-GTTMVGYQ-PQG-DKANFFRMVISNPAATQSDIDFLIEEIERL  498 (504)
T ss_dssp             SCCCCHHHHHHHTTHHHHHHHHHHHH-TSCEEEEE-EET-TEEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHhC-CcEEEEee-EEC-CceEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence                          024566677766 75 44322 221 11368999985   5899999999999875

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.76  E-value=2.9e-17  Score=140.02  Aligned_cols=240  Identities=12%  Similarity=0.091  Sum_probs=164.2

Q ss_pred             ccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024            7 VIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII   81 (272)
Q Consensus         7 ~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v   81 (272)
                      ++.+.+.. +...+++.| .++.++.+++.+..++ ++.  .++++++.+++.+|.||.+.|.        +|+++++++
T Consensus       109 ~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi--------i~~~~~~~~  180 (377)
T 3e77_A          109 VVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF--------IPDVKGAVL  180 (377)
T ss_dssp             CCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS--------CCCCTTCCE
T ss_pred             EECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCCccEEEEeCccCchheEchh--------hhccCCCEE
Confidence            34444444 556778888 7777787655455454 222  3789999999999999999884        367889999


Q ss_pred             EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc---chHHHHHhh--hhhccC
Q 036024           82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF---PVINDFNRI--ICTCFN  156 (272)
Q Consensus        82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~  156 (272)
                      ++|.+.+.   +..+..+..++      ++..|..|.+|.+|  +|+++.+++.+....+   ...+ +...  ......
T Consensus       181 ~vD~~q~~---g~~~id~~~~~------~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~-~~~~~~~~~~~~  248 (377)
T 3e77_A          181 VCDMSSNF---LSKPVDVSKFG------VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLE-YKVQAGNSSLYN  248 (377)
T ss_dssp             EEECTTTT---TSSCCCGGGCS------EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGC-HHHHHTTTTCSS
T ss_pred             EEEccccc---CCCCCchhhcC------EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhh-HHHHhhcCCCCC
Confidence            99999975   22233444432      46788899999888  7899988877543221   1111 1111  122345


Q ss_pred             CcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhC-CCeEecC----CCceEEEeecCCCCh-----HHHH
Q 036024          157 GASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASL-GIKVYGG----INAPYVWAHFPGRKS-----WDVF  225 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~~i~l~~~~~-----~~~~  225 (272)
                      +++.....++.++++..... .++++.++.++..+++++.|+++ |+.+.+.    ..+..+.+.+++.++     ..+.
T Consensus       249 Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l  328 (377)
T 3e77_A          249 TPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFL  328 (377)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCchhHHHHHH
Confidence            67777777777777643334 57899999999999999999998 8875431    224567788886433     2344


Q ss_pred             HHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          226 AEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      ..+. ++||.+.+|...    .+.+|+|+  ++|++|++.+++.|+++
T Consensus       329 ~~l~-~~Gi~~~~g~~~----~g~iRiS~~~~~t~edId~l~~al~~~  371 (377)
T 3e77_A          329 DKAL-ELNMLSLKGHRS----VGGIRASLYNAVTIEDVQKLAAFMKKF  371 (377)
T ss_dssp             HHHH-HTTEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHH-HCCcEEeCCCCc----CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            4444 569999887632    35699997  45899999999999876

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.76  E-value=1.2e-17  Score=147.23  Aligned_cols=198  Identities=13%  Similarity=0.052  Sum_probs=134.8

Q ss_pred             CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCC--CCceEEEecCccccCC
Q 036024           45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA--REVAIEISSFSKFSGF  121 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~  121 (272)
                      ++++|++...+|+||. ..+++.+++|.++|++||+++|+||+|.++...+.......+...  +|    +.||||.+ +
T Consensus       258 ~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~D----i~t~sK~~-l  332 (472)
T 1ohv_A          258 TVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPAD----VMTFSKKM-M  332 (472)
T ss_dssp             CEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCS----EEEECGGG-S
T ss_pred             CEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCC----EEEEcccc-c
Confidence            6788877777888996 567999999999999999999999999876554432233332211  22    34899995 3


Q ss_pred             CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--  199 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--  199 (272)
                      .|   ||++ ++++ .        .+.......+.+.+++++.++.+.++....   +...++++++.+++++.|+++  
T Consensus       333 ~G---G~~~-~~~~-~--------~~~~~~~~~T~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~  396 (472)
T 1ohv_A          333 TG---GFFH-KEEF-R--------PNAPYRIFNTWLGDPSKNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQA  396 (472)
T ss_dssp             SE---EEEE-CGGG-S--------CSSSSSSCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CccC-chhh-c--------ccccccccCccCccHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHh
Confidence            34   7766 4443 1        112222334445788888888877763221   345678888888888888764  


Q ss_pred             C----CeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHh
Q 036024          200 G----IKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEAL  271 (272)
Q Consensus       200 g----~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~  271 (272)
                      +    +....+ .|.+++++++. ....++...|+++ ||.+.|+.      .+++|++  +..+++++++++++|+++
T Consensus       397 ~~~~~v~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~g------~~~iRi~~~~~~t~e~i~~~~~~l~~~  467 (472)
T 1ohv_A          397 RYPQFISRVRG-RGTFCSFDTPDESIRNKLISIARNK-GVMLGGCG------DKSIRFRPTLVFRDHHAHLFLNIFSDI  467 (472)
T ss_dssp             HCTTTCEEEEE-ETTEEEEECSSHHHHHHHHHHHHHT-TEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             hCCCcEEeecC-CceEEEEEeCChhHHHHHHHHHHHC-CeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            1    332343 36677778763 1245677777765 99998852      5789996  466999999999999875

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.62  E-value=5.1e-20  Score=161.28  Aligned_cols=202  Identities=14%  Similarity=0.099  Sum_probs=139.1

Q ss_pred             CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++++|++...+|+||.+. +++.+++|.++|+++|+++|+||+|. +.. +.........    ....+.||||.+| +
T Consensus       232 ~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~~~a~~~~g----v~pDi~t~sK~lg-~  304 (465)
T 2yky_A          232 HDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SGGGAQEMLG----ISADLTTLGKYIG-G  304 (465)
Confidence            4677777765566799654 57889999999999999999999999 632 2111111111    1233458999999 6


Q ss_pred             ccceeEEEecccccccCCcchHHHHHh-----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNR-----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLA  197 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~  197 (272)
                      |+|+||+++++++        ++.+..     .....+++.+++++.|+.+.++....   +...++++++.+++++.|+
T Consensus       305 G~piG~v~~~~~i--------~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~  373 (465)
T 2yky_A          305 GMSFGAFGGRRDL--------MERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT---RQAASDLSASGDRFRANLN  373 (465)
Confidence            9999999999888        344433     23344556788888888888863322   3466777777888888777


Q ss_pred             hC----CCeEecCCCceEEEeecCC-C-------------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHH
Q 036024          198 SL----GIKVYGGINAPYVWAHFPG-R-------------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRE  259 (272)
Q Consensus       198 ~~----g~~~~~~~~~~~~~i~l~~-~-------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~  259 (272)
                      ++    ++....+..|.++|+.+.. .             ....++..++++ ||.+.|+. |.    .   +++..+++
T Consensus       374 ~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~-GV~v~p~~-~~----~---~s~~~t~e  444 (465)
T 2yky_A          374 RIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRK-GIYLAPRG-MY----A---LSLEIADA  444 (465)
Confidence            65    3322233467888887753 1             134566677765 99998875 21    1   67777999


Q ss_pred             HHHHHHHHHHHhC
Q 036024          260 SILEASRRLEALF  272 (272)
Q Consensus       260 ~i~~~l~~l~~~l  272 (272)
                      |+++++++|++++
T Consensus       445 did~~l~~l~~~l  457 (465)
T 2yky_A          445 GRDAFAEALADFI  457 (465)
Confidence            9999999988764

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.74  E-value=1.5e-17  Score=144.32  Aligned_cols=181  Identities=10%  Similarity=0.076  Sum_probs=121.3

Q ss_pred             HHhcccc-eeEEeecCCCCCcccC-CCC--C--CCceEEEEec----CCCccccCCCHHHHHHHHHHHHH--cCCEEEEc
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPD-LKG--T--SRTDIIFFCS----PNNPTGHAATQNQLEQLVEFARN--NGSIIIFD   84 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~--~~~~~i~~~~----p~nptG~~~~~~~l~~l~~~~~~--~~~~vi~D   84 (272)
                      ..++..| +++.+++++++...+| +++  .  +++|+|++++    |+||||.+   .++++|+++|++  +|+++++|
T Consensus       142 ~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i---~dl~~i~~la~~~~~g~~livD  218 (427)
T 3i16_A          142 GSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLI---EDIKSIVDCVKNIRKDIICFVD  218 (427)
T ss_dssp             CCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCH---HHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccH---HHHHHHHHHHHHhCCCCEEEEE
Confidence            3456678 8999998765333333 222  1  6899999998    89999876   779999999999  99999999


Q ss_pred             ccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhccCCcc-hHH
Q 036024           85 SAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS-NIA  162 (272)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  162 (272)
                      ++|..+.+...+.   ...    ..++++|+||.+|.+| .+.||+++++++        ++.+.........+.. .+.
T Consensus       219 ~a~~~~~~~~~p~---~~g----aDiv~~S~sK~lgg~g~~~gG~i~~~~~l--------i~~l~~~~~~~~~g~~~~~~  283 (427)
T 3i16_A          219 NCYGEFMDTKEPT---DVG----ADLIAGSLIKNIGGGIAPTGGYLAGTKDC--------IEKTSYRLTVPGIGGECGST  283 (427)
T ss_dssp             CTTTTTSSSSCGG---GGT----CSEEEEETTSGGGTTTCCSCEEEEECHHH--------HHHHHHHHSCTTTGGGCCCC
T ss_pred             CCCccccccCCcc---ccC----CeEEEecCcccCCCCCCceEEEEEECHHH--------HHHHHHhcccCccCccCCcc
Confidence            9998765332221   121    2389999999998544 567999998877        5566553322111110 000


Q ss_pred             HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCce-----EEEeecCC
Q 036024          163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP-----YVWAHFPG  218 (272)
Q Consensus       163 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-----~~~i~l~~  218 (272)
                      ..++..++  .+......+.++..+++..+.+.|+++|+++++. .+.     ++.+.+.+
T Consensus       284 ~~~a~~~l--~gl~~~~~r~~~~~~~a~~la~~L~~~g~~V~p~-~~~~~~~~i~~i~l~~  341 (427)
T 3i16_A          284 FGVVRSMY--QGLFLAPHISMEALKGAILCSRIMELAGFEVMPK-YDEKRSDIIQSIKFND  341 (427)
T ss_dssp             TTCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEESC-TTSCCSSSCEEEECSS
T ss_pred             HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhCCCeecCC-CCCCCccEEEEEEECC
Confidence            11011111  2223446788999999999999999999988553 443     77788863

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.74  E-value=2.6e-17  Score=145.23  Aligned_cols=242  Identities=12%  Similarity=-0.021  Sum_probs=154.3

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCC-----C------CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S------RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII   82 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi   82 (272)
                      +...++..| +++.+|.++++   .|++.+     +      .+.+++++.++|+||.+-+   +++|+++|++||++++
T Consensus       195 ~~~~~~~~g~~~~~v~~d~~~---~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~---l~~I~~la~~~~~~lh  268 (475)
T 3k40_A          195 VERAGLLGGVKLRSVQSENHR---MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY---LDECGPVGNKHNLWIH  268 (475)
T ss_dssp             HHHHHHHHTCEEEEECCBTTB---CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHTTCEEE
T ss_pred             HHHHHHHcCCceEEEECCCCC---cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC---HHHHHHHHHHhCCeEE
Confidence            556666678 99999997553   553331     1      1567888899999999855   9999999999999999


Q ss_pred             EcccCCccccC-CCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccccc-ccCCcchHHHHHhh--------hh
Q 036024           83 FDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL-FSSGFPVINDFNRI--------IC  152 (272)
Q Consensus        83 ~D~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~-~~~~~~~~~~~~~~--------~~  152 (272)
                      +|++|+..... +.....  +.+......+..+++|.++.| ..+|+++..+... ...+......+...        ..
T Consensus       269 vD~A~~~~~~~~~~~~~~--~~gi~~~Ds~~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  345 (475)
T 3k40_A          269 VDAAYAGSAFICPEYRHL--MKGIESADSFNFNPHKWMLVN-FDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRH  345 (475)
T ss_dssp             EECTTGGGGGGSGGGGGG--GTTGGGCSEEEECHHHHSSCC-SSCEEEEESSGGGC------------------------
T ss_pred             EeHHhHHHHHhCHhhHHH--hcCcccCCEEEECchhccCCC-CceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCccc
Confidence            99999864332 111111  111111126778999988744 4578888776542 11111000111000        00


Q ss_pred             hcc-CC--cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC--ChHHHHH
Q 036024          153 TCF-NG--ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR--KSWDVFA  226 (272)
Q Consensus       153 ~~~-~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~--~~~~~~~  226 (272)
                      .+. .+  ...+.+.++.+.+   +.+.++++.++..++++++.+.|+++ |+++..+....++++.+++.  ...++..
T Consensus       346 ~~~~~sr~~~~l~l~~al~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~~~~~l~~  422 (475)
T 3k40_A          346 WQIPLGRRFRALKLWFVLRLY---GVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEALLK  422 (475)
T ss_dssp             ---CCCGGGTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHHHHHHHH
T ss_pred             ccccCCCcccHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchHHHHHHHH
Confidence            000 00  1123333333333   34566889999999999999999998 99998766777888888642  3567778


Q ss_pred             HHHHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          227 EILEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                      +|.++.++.+.|+..   .+..++|+++.   ++++++++++++|+++
T Consensus       423 ~L~~~g~~~~~~~~~---~g~~~lR~~~~~~~tt~~di~~~~~~i~~~  467 (475)
T 3k40_A          423 RINGRGHIHLVPAKI---KDVYFLRMAICSRFTQSEDMEYSWKEVSAA  467 (475)
T ss_dssp             HHHHHTSCBCEEEEE---TTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCcEEEEeeEE---CCEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            888875556655432   23678999964   3789999999999875

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.74  E-value=9.5e-17  Score=139.65  Aligned_cols=244  Identities=14%  Similarity=0.073  Sum_probs=145.3

Q ss_pred             cccccccCccc-chHH----hcccc-eeEEe-ecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDE----VGKYC-NIEYL-ECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~----~~~~g-~~~~~-~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..+.+. ....    ++..| +++.+ +.+.     ++ +++  .+++++|++++|+||||.+++   +++|.++
T Consensus        98 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d-----~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~  169 (421)
T 2ctz_A           98 DNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREER-----PEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQA  169 (421)
T ss_dssp             CEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCC-----HHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCC-----HHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHH
Confidence            55666655444 3333    35677 88888 6541     11 221  258899999999999999998   8999999


Q ss_pred             HHHcCCEEEEcccC-CccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecc-c--ccccCCcchHH----
Q 036024           74 ARNNGSIIIFDSAY-AAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPE-E--LLFSSGFPVIN----  145 (272)
Q Consensus        74 ~~~~~~~vi~D~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~-~--~~~~~~~~~~~----  145 (272)
                      |+++|+++|+|++| ... +.+.  ++ ...    ..+++.|++|.+|.+|.++|++++.+ +  +..+....+..    
T Consensus       170 a~~~g~~livD~~~~~~g-~~~~--~~-~~~----~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g  241 (421)
T 2ctz_A          170 AREKGVALIVDNTFGMGG-YLLR--PL-AWG----AALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPG  241 (421)
T ss_dssp             HHHHTCEEEEECGGGGGG-TSCC--GG-GGT----CSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGG
T ss_pred             HHHcCCEEEEECCccccc-ccCC--cc-ccC----CeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccch
Confidence            99999999999999 532 2221  22 221    23889999999998899999988852 1  10000000100    


Q ss_pred             -----------------HHHhh-hhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec-
Q 036024          146 -----------------DFNRI-ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG-  205 (272)
Q Consensus       146 -----------------~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-  205 (272)
                                       ..+.. ........+.....++...++     .+..+.++..++.+++.+.|+++ ++.... 
T Consensus       242 ~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~-----~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~  316 (421)
T 2ctz_A          242 YHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGME-----TLSLRAERHVENTLHLAHWLLEQPQVAWVNY  316 (421)
T ss_dssp             GTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred             hhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcc-----hHHHHHHHHHHhHHHHHHHHHhCCCeeEEEC
Confidence                             00000 011111233333333333332     23445666678999999999987 666542 


Q ss_pred             C-----------------CCceEEEeecCCCChHHHHHHHHHh---cCeEeeCCCCCCC---------------------
Q 036024          206 G-----------------INAPYVWAHFPGRKSWDVFAEILEK---THITTVPGSGFGP---------------------  244 (272)
Q Consensus       206 ~-----------------~~~~~~~i~l~~~~~~~~~~~ll~~---~gi~v~~g~~~~~---------------------  244 (272)
                      |                 ..+.++.+.+++.  .+....++++   .++.+..|..+..                     
T Consensus       317 p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~--~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g  394 (421)
T 2ctz_A          317 PGLPHHPHHDRAQKYFKGKPGAVLTFGLKGG--YEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAG  394 (421)
T ss_dssp             TTSTTCTTHHHHHHHHTTCCCSEEEEEETTH--HHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHT
T ss_pred             CCCCCCCCHHHHHHhccCCCceEEEEEeCCC--HHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcC
Confidence            1                 2366788888742  2223344443   3455555532210                     


Q ss_pred             CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          245 GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       245 ~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ..++.+|+|+..  ++++++++.|+++|
T Consensus       395 ~~~~~vRlS~g~--e~~~~li~~l~~al  420 (421)
T 2ctz_A          395 VSPEMVRLSVGL--EHVEDLKAELKEAL  420 (421)
T ss_dssp             CCTTEEEEECCS--SCHHHHHHHHHHHT
T ss_pred             CCCCeEEEEeCC--CCHHHHHHHHHHHh
Confidence            114899999853  57777788887765

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.74  E-value=1.2e-17  Score=144.19  Aligned_cols=177  Identities=16%  Similarity=0.139  Sum_probs=119.4

Q ss_pred             Hhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEec----CCCccccCCCHHHHHHHHHHHHH--cCCEEEEcccC
Q 036024           18 EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCS----PNNPTGHAATQNQLEQLVEFARN--NGSIIIFDSAY   87 (272)
Q Consensus        18 ~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~----p~nptG~~~~~~~l~~l~~~~~~--~~~~vi~D~~~   87 (272)
                      .++..| +++.+++++++...++ +++  .+++|+|++++    |+||||.+   .++++|+++|++  +|+++++|++|
T Consensus       128 ~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v---~~l~~I~~la~~~~~~~~livD~a~  204 (409)
T 3jzl_A          128 SLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI---EKIKEMIVFVKNINPEVIVFVDNCY  204 (409)
T ss_dssp             CTGGGTCEEEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH---HHHHHHHHHHHHHCTTCEEEEECTT
T ss_pred             HHHHcCCEEEEeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc---ccHHHHHHHHHhhCCCCEEEEeCCc
Confidence            456678 8889988755333333 222  26899999998    99999977   679999999999  99999999999


Q ss_pred             CccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhh----ccCCcchHH
Q 036024           88 AAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICT----CFNGASNIA  162 (272)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  162 (272)
                      ..+.+...+.   ...    ..++++|+||.+|.+| .+.||+++++++        ++.+......    ...++....
T Consensus       205 ~~~~~~~~p~---~~g----~Div~~S~sK~lgg~~~~~GG~v~~~~~l--------i~~l~~~~~~~~~g~~~g~~~~~  269 (409)
T 3jzl_A          205 GEFVEYQEPP---EVG----ADIIAGSLIKNPGGGLAKTGGYIAGKEAL--------VDLCGYRLTTPGIGREAGASLYS  269 (409)
T ss_dssp             CTTTSSCCSG---GGT----CSEEEEETTSGGGTTTCSSCEEEEECHHH--------HHHHHHHHSCTTTGGGCCCCTTC
T ss_pred             ccccccCCcc---ccC----CeEEEECccccCCccCCceEEEEEeCHHH--------HHHHHHHhccccccccccccHHH
Confidence            8765432221   221    2399999999998544 346999998877        5555543321    111122111


Q ss_pred             HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCce-----EEEeecCC
Q 036024          163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP-----YVWAHFPG  218 (272)
Q Consensus       163 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-----~~~i~l~~  218 (272)
                      ..++.+.+     .....++++..+++..+.+.|+++|+++.+. .+.     .+.+.+++
T Consensus       270 ~~~~l~gl-----~~~~~r~~~~~~~a~~la~~L~~~g~~v~p~-~~~~~~~~i~~i~l~~  324 (409)
T 3jzl_A          270 LLEMYQGF-----FLAPHVTAQAIKGARFTAAMLAEFGVEADPV-WDAPRTDLIQSVSFHN  324 (409)
T ss_dssp             HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTTCEEESC-TTSCCSSSCCEEECSC
T ss_pred             HHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CCCCCccEEEEEEeCC
Confidence            22222222     3346678889999999999999999988553 333     66777763

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.73  E-value=1.3e-17  Score=145.19  Aligned_cols=205  Identities=16%  Similarity=0.157  Sum_probs=133.5

Q ss_pred             ccccccc--CcccchHH----------hcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEe-cCCCccccCCCH
Q 036024            4 DSSVIVG--QAGDLEDE----------VGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFC-SPNNPTGHAATQ   64 (272)
Q Consensus         4 d~~~~~~--~~~~~~~~----------~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~-~p~nptG~~~~~   64 (272)
                      |.|++..  +++.+...          ++..| +++.++.+++  +.+|++.     .+++++|+++ +||||+|...+.
T Consensus       108 d~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~--~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~  185 (431)
T 3ht4_A          108 DELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEG--GLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTI  185 (431)
T ss_dssp             CEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTT--SSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH
T ss_pred             CEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCCC--CCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCH
Confidence            5566664  44445533          34578 9999998765  4455333     2689999999 699999999999


Q ss_pred             HHHHHHHHHHHH--cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC-CccceeEEEecccccccCCc
Q 036024           65 NQLEQLVEFARN--NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF-TGVRLGWTVVPEELLFSSGF  141 (272)
Q Consensus        65 ~~l~~l~~~~~~--~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~r~G~~~~~~~~~~~~~~  141 (272)
                      +++++|+++|++  +|+++++|++|..+.+...+.   .+.    ..++++|+||.+|. .+...||+++++++      
T Consensus       186 ~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~---~~g----~Di~~~S~sK~lgg~~~~~GG~v~~~~~l------  252 (431)
T 3ht4_A          186 SQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC---HVG----ADLMAGSLIKNPGGGIVKTGGYIVGKEQY------  252 (431)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG---GTT----CSEEEEETTSGGGTTTCSSCEEEEECHHH------
T ss_pred             HHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc---ccC----CeEEEcCccccCCCCCCCceEEEEecHHH------
Confidence            999999999999  999999999999876543322   221    12899999999752 12334999998877      


Q ss_pred             chHHHHHhhhhhccC----CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC----ceEEE
Q 036024          142 PVINDFNRIICTCFN----GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN----APYVW  213 (272)
Q Consensus       142 ~~~~~~~~~~~~~~~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~----~~~~~  213 (272)
                        ++.+.........    +++.....++.+.+     .....+.++..++++.+.+.|+++|+++.+...    +.++.
T Consensus       253 --i~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~a~~l~~~L~~~g~~v~p~~~~~~~~li~~  325 (431)
T 3ht4_A          253 --VEACAYRLTSPGIGAEAGASLYSLQEMYQGF-----FLAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRTDLIQS  325 (431)
T ss_dssp             --HHHHHHHHSCTTTTTSCSCCCSCSHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTCCEESCTTSCCSSSCCE
T ss_pred             --HHHHHHHhccCCcccccCccHHHHHHHHhHh-----hhHHHHHHHHHHHHHHHHHHHHhCcCEecCCCCCCCccEEEE
Confidence              5555543322111    11111112122222     234667788999999999999999988754321    23667


Q ss_pred             eecCCCC-hHHHHHHHHH
Q 036024          214 AHFPGRK-SWDVFAEILE  230 (272)
Q Consensus       214 i~l~~~~-~~~~~~~ll~  230 (272)
                      +.+++.. ...++..+.+
T Consensus       326 i~l~~~~~~~~~~~~l~~  343 (431)
T 3ht4_A          326 VQFDDKDRMIAFCQAIQY  343 (431)
T ss_dssp             EECCCHHHHHHHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHHHh
Confidence            7776322 2334444433

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.73  E-value=6.3e-17  Score=144.05  Aligned_cols=238  Identities=10%  Similarity=0.029  Sum_probs=147.9

Q ss_pred             chHHhcccc----eeEEeecCCCCCcccCCCCC-----CC------ceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024           15 LEDEVGKYC----NIEYLECGPGNNFFPDLKGT-----SR------TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus        15 ~~~~~~~~g----~~~~~~~~~~~~~~~dl~~~-----~~------~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      +...++..|    +++.+|.+.+  +..|++.+     ++      ++++++++|+||||.+-+   +++|+++|++||+
T Consensus       205 ~~~~~~~~g~g~~~~~~v~~d~~--~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~---l~~I~~ia~~~~~  279 (511)
T 3vp6_A          205 IKKAGAALGFGTDNVILIKCNER--GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYNL  279 (511)
T ss_dssp             HHHHHHHTTSCGGGEEEECBCTT--SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC---HHHHHHHHHHHTC
T ss_pred             HHHHHHHcCCCCCcEEEeecCCC--CccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc---HHHHHHHHHHcCC
Confidence            555555555    5788888754  45553331     22      788999999999999955   9999999999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh----hh----
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR----II----  151 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~----~~----  151 (272)
                      ++++|++|+.......... ..+.+...-.+++.+++|.++.| ..+|++++++...       ......    +.    
T Consensus       280 ~lhvD~a~~~~~~~~~~~~-~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~-------~~~~~~~~~~yl~~~~  350 (511)
T 3vp6_A          280 WLHVDAAWGGGLLMSRKHR-HKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGI-------LQGCNQMHASYLFQQD  350 (511)
T ss_dssp             EEEEEETTGGGGGGCTTTG-GGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTH-------HHHHHCCCCTTTCCSS
T ss_pred             EEEEEccchhhHhhChhhh-hhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHH-------HHHHhccCCccccCcc
Confidence            9999999987554221110 11111111226778999998744 5688888876541       111100    00    


Q ss_pred             ----------hhc---cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEec---CCCceEEEe
Q 036024          152 ----------CTC---FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYG---GINAPYVWA  214 (272)
Q Consensus       152 ----------~~~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~---~~~~~~~~i  214 (272)
                                ..+   ..........++.+.   .+.++++++.++..++++++.+.|++. |+++..   +..+.++|-
T Consensus       351 ~~~~~~~~~~~~~~~~~r~~~al~~~~al~~---~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~  427 (511)
T 3vp6_A          351 KHYDVSYDTGDKAIQCGRHVDIFKFWLMWKA---KGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFW  427 (511)
T ss_dssp             CSSCGGGCCGGGSSCSSCCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEE
T ss_pred             cccccccCccCCCCCCCCchHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEE
Confidence                      000   000122333333333   345677999999999999999999987 899876   333444433


Q ss_pred             ecCC-CC---------------hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          215 HFPG-RK---------------SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       215 ~l~~-~~---------------~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                      ..+. .+               ..++..+|.++ |+.+.. ..+...+.+++|+++.   .+.+++++++++|+++
T Consensus       428 ~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-G~~~~~-~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~  501 (511)
T 3vp6_A          428 YIPQSLRGVPDSPQRREKLHKVAPKIKALMMES-GTTMVG-YQPQGDKANFFRMVISNPAATQSDIDFLIEEIERL  501 (511)
T ss_dssp             ECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHH-TSCEEE-EEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred             EeCccccccccchhHHHHHHHHHHHHHHHHHhc-CCEEEE-EEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            2231 10               22466677777 755433 1122223457999973   3789999999998764

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.72  E-value=1.8e-15  Score=138.96  Aligned_cols=254  Identities=12%  Similarity=-0.040  Sum_probs=150.5

Q ss_pred             cccccccCccc-chHH-hcccc-eeEEeecCCCCCc----ccCCCCC----------CC------c----eEEEEecCCC
Q 036024            4 DSSVIVGQAGD-LEDE-VGKYC-NIEYLECGPGNNF----FPDLKGT----------SR------T----DIIFFCSPNN   56 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~-~~~~g-~~~~~~~~~~~~~----~~dl~~~----------~~------~----~~i~~~~p~n   56 (272)
                      |.|++..+... +... +...| ++++++...+ .+    .+|++.+          ++      +    |++++++| |
T Consensus       214 D~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n  291 (730)
T 1c4k_A          214 DLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-T  291 (730)
T ss_dssp             CEEEEETTCCHHHHHHHTTTTCCEEEEECEEEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-C
T ss_pred             CEEEEcCCchHHHHHHHHHHCCCEEEEEeCCcc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-C
Confidence            55666655543 4444 56677 8888877533 22    1342222          22      4    89999999 5


Q ss_pred             ccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc-ccCCCC---CCcc--ccCCCCCceEEEecCccccCCCccce-eEE
Q 036024           57 PTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY-VTDGCP---RSIY--EIPGAREVAIEISSFSKFSGFTGVRL-GWT  129 (272)
Q Consensus        57 ptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~-~~~~~~---~~~~--~~~~~~~~~i~~~s~sK~~g~~g~r~-G~~  129 (272)
                      |+|.+.+   +++|+++|+++++++++|++|... .+.+..   .++.  .+.....++++++|+||.++  |.+. |++
T Consensus       292 ~~G~v~d---l~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~--g~~~gg~I  366 (730)
T 1c4k_A          292 YDGTIYN---AHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA--GFSQTSQI  366 (730)
T ss_dssp             TTSEEEC---HHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS--CCTTCEEE
T ss_pred             CCCeecC---HHHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCC--CCCCEEEE
Confidence            8999977   899999999999999999999743 333211   1111  11222346799999999875  3443 566


Q ss_pred             EecccccccCCcch-HHHHHhhhh-hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh--CCCeEec
Q 036024          130 VVPEELLFSSGFPV-INDFNRIIC-TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS--LGIKVYG  205 (272)
Q Consensus       130 ~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~  205 (272)
                      .++++.+......+ ...+..... ..+.+++.....++..++.....+..++..+++.++.+++++.|++  .|+++..
T Consensus       367 ~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~  446 (730)
T 1c4k_A          367 HKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFV  446 (730)
T ss_dssp             EEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESS
T ss_pred             EecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEcc
Confidence            56555431100000 122222221 2222344443333333333222223366678899999999999988  4888765


Q ss_pred             CCC-------------------------------------c-eE-----EEeecCC------------CChHHHHHHHHH
Q 036024          206 GIN-------------------------------------A-PY-----VWAHFPG------------RKSWDVFAEILE  230 (272)
Q Consensus       206 ~~~-------------------------------------~-~~-----~~i~l~~------------~~~~~~~~~ll~  230 (272)
                      +..                                     + .+     +.+..++            ....++...|.+
T Consensus       447 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e  526 (730)
T 1c4k_A          447 PPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRD  526 (730)
T ss_dssp             CSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHH
Confidence            421                                     1 11     4556542            345566666555


Q ss_pred             hcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          231 KTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       231 ~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      + ||.+...      +...+|+++  ..+++++++++++|+++
T Consensus       527 ~-GI~v~~~------~~~~ir~~~s~g~t~e~i~~Ll~aL~~i  562 (730)
T 1c4k_A          527 H-GIIPEKS------DLNSILFLMTPAETPAKMNNLITQLLQL  562 (730)
T ss_dssp             T-TCCCSEE------CSSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             C-CcEEEEC------CCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            5 9988643      256788885  55899999999988764

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.71  E-value=7.2e-17  Score=142.73  Aligned_cols=243  Identities=13%  Similarity=0.025  Sum_probs=155.2

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCC-----C------CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGT-----S------RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII   82 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~-----~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi   82 (272)
                      +...++..| +++.+|.++  ++.+|++.+     +      .+.+++++.++|+||.+-+   +++|+++|++||++++
T Consensus       201 ~~~~~~~~g~~~~~v~~~~--~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~---l~~I~~la~~~~~~lh  275 (481)
T 4e1o_A          201 VEKAGLISLVKMKFLPVDD--NFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC---LSELGPICAREGLWLH  275 (481)
T ss_dssp             HHHHHHHHTCEEEEECCCT--TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEE
T ss_pred             HHHHHHhCCCceEEEEcCC--CCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC---HHHHHHHHHHcCCeEE
Confidence            555556667 999999864  445553331     1      1667888899999998855   9999999999999999


Q ss_pred             EcccCCccccCC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEeccccc-ccCCcchHHHHHh--------hhh
Q 036024           83 FDSAYAAYVTDG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL-FSSGFPVINDFNR--------IIC  152 (272)
Q Consensus        83 ~D~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~-~~~~~~~~~~~~~--------~~~  152 (272)
                      +|++|+...... .....  ..+......+..+++|.++.| .-+|+++..+... ...+......+..        ...
T Consensus       276 vDaA~g~~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  352 (481)
T 4e1o_A          276 IDAAYAGTAFLCPEFRGF--LKGIEYADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMH  352 (481)
T ss_dssp             EECTTGGGGGGSGGGGGG--GTTGGGCSEEEECHHHHSSCC-SSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGG
T ss_pred             eehhhHHHHHhChhhHHH--hcCcccCCEEEEChHHhcCCC-CceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCccc
Confidence            999998654321 11111  111111126667999998755 3467777765442 1111000000100        000


Q ss_pred             h---ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCC--ChHHHHH
Q 036024          153 T---CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGR--KSWDVFA  226 (272)
Q Consensus       153 ~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~--~~~~~~~  226 (272)
                      .   .......+.+.++.+.+   +.+.++++.++..++++++.+.|+++ |+++..+....++++.+++.  ...++..
T Consensus       353 ~~~~~~r~~~~l~~~~al~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~  429 (481)
T 4e1o_A          353 WQIPLSRRFRSVKLWFVIRSF---GVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNSLTENVLK  429 (481)
T ss_dssp             GSSSSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHHHHHHHHH
T ss_pred             ccccCCCCccHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchHHHHHHHH
Confidence            0   00011234444444444   34567888999999999999999998 89998776778888888642  3456777


Q ss_pred             HHHHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          227 EILEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                      ++.++..+.+.|+.   ..+..++|+++.   ++++++++++++|+++
T Consensus       430 ~L~~~g~~~~~~~~---~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~  474 (481)
T 4e1o_A          430 EIAKAGRLFLIPAT---IQDKLIIRFTVTSQFTTRDDILRDWNLIRDA  474 (481)
T ss_dssp             HHHHHCSSBCEEEE---ETTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHhCCeEEEEeeE---ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            77777335555443   234578999963   3789999999999875

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.71  E-value=4.8e-17  Score=141.06  Aligned_cols=175  Identities=13%  Similarity=0.109  Sum_probs=118.2

Q ss_pred             HHhcccc-eeEEeecCCCCCcccCCCC-----C--CCceEEEEec----CCCccccCCCHHHHHHHHHHHHH--cCCEEE
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPDLKG-----T--SRTDIIFFCS----PNNPTGHAATQNQLEQLVEFARN--NGSIII   82 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~--~~~~~i~~~~----p~nptG~~~~~~~l~~l~~~~~~--~~~~vi   82 (272)
                      ..++..| +++.++. ++  +.+|++.     .  +++|+|++++    |+||||.+   .++++|+++|++  +|++++
T Consensus       143 ~~l~~~G~~~~~v~~-~~--~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v---~dl~~i~~ia~~~~~g~~li  216 (427)
T 3hvy_A          143 GSLREYGVKYKMVDL-KD--GKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRI---AEIAEIIKSIREVNENVIVF  216 (427)
T ss_dssp             CCTGGGTCEEEECCC-BT--TBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCH---HHHHHHHHHHHHHCSSSEEE
T ss_pred             hHHHHcCCEEEEecC-CC--CCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccH---HHHHHHHHHHHHhCCCCEEE
Confidence            3456678 8888888 33  3455332     1  6899999998    89999866   679999999999  899999


Q ss_pred             EcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc-cceeEEEecccccccCCcchHHHHHhhhhhccCC---c
Q 036024           83 FDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG---A  158 (272)
Q Consensus        83 ~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  158 (272)
                      +|++|..+.+...+.   ...    ..++++|+||.+|..| .+.||+++++++        ++.+.........+   .
T Consensus       217 vD~a~~~~~~~~~p~---~~g----aDiv~~S~sK~lgg~g~~~GG~i~~~~~l--------i~~l~~~~~~~~~g~~~~  281 (427)
T 3hvy_A          217 VDNCYGEFVEEKEPT---DVG----ADIIAGSLIKNIGGGIATTGGYIAGKEEY--------VTQATFRVTVPGIGGECG  281 (427)
T ss_dssp             EECTTCTTTSSSCGG---GGT----CSEEEEETTSGGGTTTCCSCEEEEECHHH--------HHHHHHHHSCTTTGGGCC
T ss_pred             EECCccccccCCCCc---ccC----CeEEEECCcccccccccceEEEEEECHHH--------HHHHHHHhhcCCcccccC
Confidence            999998765332221   121    2389999999998433 456999998877        55665533211110   1


Q ss_pred             chHH-HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCce-----EEEeecCC
Q 036024          159 SNIA-QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP-----YVWAHFPG  218 (272)
Q Consensus       159 ~~~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-----~~~i~l~~  218 (272)
                      +.+. ...+...     ......+.++..+++..+.+.|+++|+++.+. .+.     ++.+.+.+
T Consensus       282 ~~~~~a~~~~~g-----l~~~~~r~~~~~~~a~~la~~L~~~g~~V~p~-~~~~~~~li~~~~l~~  341 (427)
T 3hvy_A          282 STFGVMRSLYEG-----LFMAPHVTIEAVKGAVFCARIMELAGFDVLPK-YNDKRTDIIQAIKFND  341 (427)
T ss_dssp             CCTTCHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTTCEEESC-TTSCCSSSEEEEECSS
T ss_pred             CCHHHHHHHHHh-----HhHHHHHHHHHHHHHHHHHHHHHhCCCeecCC-CCCCCceEEEEEeCCC
Confidence            1111 1212222     23346678889999999999999999988553 333     77778863

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.70  E-value=6e-16  Score=131.38  Aligned_cols=239  Identities=14%  Similarity=0.121  Sum_probs=159.1

Q ss_pred             ccccCccc-chHHhcccc-eeEEeecCCCCCc--ccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024            7 VIVGQAGD-LEDEVGKYC-NIEYLECGPGNNF--FPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII   82 (272)
Q Consensus         7 ~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~--~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi   82 (272)
                      ++.+.+.. +...+++.| ++..++.++++.+  .++.+-.++++++.+++.+|.||...+.        +++ ++++++
T Consensus        98 i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~~l~~~t~lv~~~~~e~~tG~~~~~--------i~~-~~~~~~  168 (361)
T 3m5u_A           98 ANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRVEFSDNADYAYICSNNTIYGTQYQN--------YPK-TKTPLI  168 (361)
T ss_dssp             EECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCCCCCTTSSEEEEESEETTTTEECSS--------CCC-CSSCEE
T ss_pred             EeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChhhcCCCCCEEEEeCCCCCcceeCCc--------ccc-cCCEEE
Confidence            45555544 555667788 9999999877543  3333212689999999999999998662        233 499999


Q ss_pred             EcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccC----CcchHHHHHhh--hhhccC
Q 036024           83 FDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS----GFPVINDFNRI--ICTCFN  156 (272)
Q Consensus        83 ~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~  156 (272)
                      +|.+++..   ..+..+..+    |  +++.|.+|.+|.+|  +|+++.+++.....    .+...+ +...  ......
T Consensus       169 vD~~q~~g---~~~id~~~~----d--~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~  236 (361)
T 3m5u_A          169 VDASSDFF---SRKVDFSNI----A--LFYGGVQKNAGISG--LSCIFIRKDMLERSKNKQIPSMLN-YLTHAENQSLFN  236 (361)
T ss_dssp             EECGGGTT---SSCCCCTTE----E--EEEEETTTTSSCTT--CEEEEEEHHHHHHHHTCCCCGGGC-HHHHHHTTTCSS
T ss_pred             EEcccccC---CCCCCcccC----C--EEEEechhccCCCc--cEEEEEcHHHHhhhcCCCCCceee-hHHHhhcCCCCC
Confidence            99998752   222233222    2  77889999999788  79999988774221    111111 1111  122335


Q ss_pred             CcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCC-C-eEecC---CCceEEEeecCC-CC-hHHHHHHH
Q 036024          157 GASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLG-I-KVYGG---INAPYVWAHFPG-RK-SWDVFAEI  228 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~---~~~~~~~i~l~~-~~-~~~~~~~l  228 (272)
                      +++.....++.++++..... .++++.++.++.++++++.|++++ + ....+   .....+.+.+++ .. +.++. ..
T Consensus       237 Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~-~~  315 (361)
T 3m5u_A          237 TPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFV-KE  315 (361)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTTHHHHHH-HH
T ss_pred             CccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchhhhHHHH-HH
Confidence            67777777777776632223 468899999999999999999986 5 55432   124567778775 22 23444 45


Q ss_pred             HHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          229 LEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      ++++||.+.+|...    .+.+|+|+  +++++|++++++.|+++
T Consensus       316 L~~~gI~~~~g~~~----~g~iRiS~~~~~t~edId~l~~al~~~  356 (361)
T 3m5u_A          316 AEEAGMIGLKGHRI----LGGIRASIYNALNLDQVKTLCEFMKEF  356 (361)
T ss_dssp             HHHTTEECCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHCCCEEecCCCc----cCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence            56669999887642    25699997  45899999999999875

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.69  E-value=6.9e-16  Score=137.60  Aligned_cols=246  Identities=9%  Similarity=-0.011  Sum_probs=147.1

Q ss_pred             cchHHhcccc----eeEEeecCCCCCcccCCCCC-----C------CceEEEEecCCCccccCCCHHHHHHHHHHHHHcC
Q 036024           14 DLEDEVGKYC----NIEYLECGPGNNFFPDLKGT-----S------RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNG   78 (272)
Q Consensus        14 ~~~~~~~~~g----~~~~~~~~~~~~~~~dl~~~-----~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~   78 (272)
                      .+...++..|    +++.+|.+++  +..|++.+     +      ++++|++++|+||||.+.+   +++|+++|+++|
T Consensus       215 s~~~~~~~~g~g~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g  289 (515)
T 2jis_A          215 SIQKGAAFLGLGTDSVRVVKADER--GKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHG  289 (515)
T ss_dssp             HHHHHHHHTTSCGGGEEEECBCTT--SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCCCcEEEEecCCC--CcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHcC
Confidence            3555555444    5788888643  44453331     1      4889999999999999976   899999999999


Q ss_pred             CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccc--ccccCCcchHHHHHhhhh----
Q 036024           79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEE--LLFSSGFPVINDFNRIIC----  152 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~--~~~~~~~~~~~~~~~~~~----  152 (272)
                      +++++|++|+.+........ ..+.+..+..+++.|++|.++.| .++|+++++++  ++..........+.....    
T Consensus       290 ~~l~vD~a~~~~~~~~~~~~-~~~~g~~~aD~v~~s~hK~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~  367 (515)
T 2jis_A          290 LWLHVDAAWGGSVLLSQTHR-HLLDGIQRADSVAWNPHKLLAAG-LQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDV  367 (515)
T ss_dssp             CEEEEEETTGGGGGGCTTTG-GGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESCCSCHHHHHHCC---------CCSCG
T ss_pred             CeEEEehhhhhHHHhChhhH-hhcCCCccCCEEEECcccccCCC-CCeeEEEEeChHHHHHHHhcCCchhccCCcccccc
Confidence            99999999987665432111 11222212237888999998734 57999999877  421100000001100000    


Q ss_pred             ---h------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC-CceEEEeecCC---
Q 036024          153 ---T------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI-NAPYVWAHFPG---  218 (272)
Q Consensus       153 ---~------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~i~l~~---  218 (272)
                         .      .......+.+.++.+.+.   ...++++.++..++++++.+.|++. |+++..+. .+.+++-..+.   
T Consensus       368 ~~~~~~~~~~~~rr~~al~~~~~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~  444 (515)
T 2jis_A          368 ALDTGDKVVQCGRRVDCLKLWLMWKAQG---DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLR  444 (515)
T ss_dssp             GGCCGGGCSCSSCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGT
T ss_pred             cCCCCCCCCCCCCcccHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCcccc
Confidence               0      000111333444444443   3556888899999999999999987 88887643 34444333331   


Q ss_pred             C--ChH-----------HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          219 R--KSW-----------DVFAEILEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       219 ~--~~~-----------~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                      .  +..           .+...+.++ |+....... .....+++|+++.   ++++++++++++|+++
T Consensus       445 ~~~~~~~~~~~l~~~~~~l~~~l~~~-G~~~~~~~~-~~~~~~~lRis~~~~~~t~edid~~~~~l~~~  511 (515)
T 2jis_A          445 GKQESPDYHERLSKVAPVLKERMVKE-GSMMIGYQP-HGTRGNFFRVVVANSALTCADMDFLLNELERL  511 (515)
T ss_dssp             TCTTSTTHHHHHHTHHHHHHHHHHHH-TSCEEEEEE-ETTEEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHhc-CCEEEEEEE-ECCceEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            0  111           134445555 754321100 0122468999984   6899999999999875

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.69  E-value=1.6e-15  Score=140.36  Aligned_cols=248  Identities=13%  Similarity=0.031  Sum_probs=148.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcc----c-----CCCC-------CCCce--------EEEEecCCCc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFF----P-----DLKG-------TSRTD--------IIFFCSPNNP   57 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~----~-----dl~~-------~~~~~--------~i~~~~p~np   57 (272)
                      |.|++..+... +...+...| ++++++.+.+ .+.    +     |++.       .++++        +++++|| ||
T Consensus       246 D~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~  323 (755)
T 2vyc_A          246 DVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TY  323 (755)
T ss_dssp             CEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CT
T ss_pred             CEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CC
Confidence            55666555443 445566678 8888888643 221    2     4222       23444        8999998 69


Q ss_pred             cccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc-cCCC---CCCccc--cCCCCCceEEEecCccccCCCccc-eeEEE
Q 036024           58 TGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV-TDGC---PRSIYE--IPGAREVAIEISSFSKFSGFTGVR-LGWTV  130 (272)
Q Consensus        58 tG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~-~~~~---~~~~~~--~~~~~~~~i~~~s~sK~~g~~g~r-~G~~~  130 (272)
                      ||.+.+   +++|+++|+++++++++|++|+... +++.   ..++..  .+-..++++++.|+||.++  |.+ .|+++
T Consensus       324 ~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~--g~~~g~~i~  398 (755)
T 2vyc_A          324 DGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIH  398 (755)
T ss_dssp             TSEEEC---HHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSS--CCTTCEEEE
T ss_pred             CceecC---HHHHHHHHHHcCCEEEEECcCchhcccCcccCCcchhcCCcCCccCCCeEEEECcccccc--CcCCeeeee
Confidence            999977   8999999999999999999997532 2221   112211  1112457789999999874  444 56777


Q ss_pred             eccc--ccccCCcchHHHHHhhh-hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-C------
Q 036024          131 VPEE--LLFSSGFPVINDFNRII-CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-G------  200 (272)
Q Consensus       131 ~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------  200 (272)
                      ++++  .+.      ...+.... .....+++.....++.+++........++..+++.++.+++++.|+++ |      
T Consensus       399 ~~~~~~~i~------~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~  472 (755)
T 2vyc_A          399 VREGRGAIN------FSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADG  472 (755)
T ss_dssp             EECCBTCCC------HHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ecCcccccC------HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence            7665  211      12222222 222233454444443333331111213567778888888888888775 4      


Q ss_pred             ---CeEecCC-------------------------------------------Cc------eEEEeecCC----------
Q 036024          201 ---IKVYGGI-------------------------------------------NA------PYVWAHFPG----------  218 (272)
Q Consensus       201 ---~~~~~~~-------------------------------------------~~------~~~~i~l~~----------  218 (272)
                         +++.++.                                           .+      .-+.+.+++          
T Consensus       473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~  552 (755)
T 2vyc_A          473 SWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEET  552 (755)
T ss_dssp             CCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSS
T ss_pred             cceeeccCchhccccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCcccc
Confidence               5544331                                           11      234555652          


Q ss_pred             -CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          219 -RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       219 -~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                       .+..++.. .|+++||.+...      +.+.+|+.+  ..|++++++++++|+++
T Consensus       553 g~~~~~l~~-~L~~~gI~~e~~------~~~~v~~~~~~g~t~~~~~~l~~al~~~  601 (755)
T 2vyc_A          553 GVPAALVTA-WLGRHGIVPTRT------TDFQIMFLFSMGVTRGKWGTLVNTLCSF  601 (755)
T ss_dssp             CCCHHHHHH-HHHTTTCCCSEE------CSSEEEEECCTTCCTTTTHHHHHHHHHH
T ss_pred             CCcHHHHHH-HHHHCCCEEeec------CCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence             22245444 456689887532      257788885  55899999888888764

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.68  E-value=1.4e-15  Score=130.37  Aligned_cols=243  Identities=14%  Similarity=0.057  Sum_probs=147.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----C--CC--ceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----T--SR--TDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~--~~--~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..+.+. +...+...| +++.++++++ ++.+|++.    .  ++  +|+|+   |+||||...+   +++|.++
T Consensus        79 d~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~l  151 (377)
T 3ju7_A           79 KYALMPSFTFPATPLAAIWCGLEPYFIDISID-DWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEEL  151 (377)
T ss_dssp             CEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHH
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHH
Confidence            66777776665 777788888 9999999865 56677443    1  34  77776   6789999877   8889999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      |+ +|+++|+|++|....... ...+.  ....+..++..+.+|.++ +| +.|+++++++.+       .+.+...+..
T Consensus       152 a~-~~~~vi~D~a~a~g~~~~-~~~~g--~~~~d~~~~S~~~~K~l~-~g-~gG~~~~~~~~l-------~~~~~~~~~~  218 (377)
T 3ju7_A          152 EK-KGVPVVVDAAPGFGLMNG-GMHYG--QDFSGMIIYSFHATKPFG-IG-EGGLIYSKNEED-------IQRIKRMGNF  218 (377)
T ss_dssp             HH-TTCCBEEECTTCTTCEET-TEETT--TTCSSEEEEECBTTSSSC-CB-SCEEEEESCHHH-------HHHHHHHTBT
T ss_pred             Hh-cCCEEEEECCCccCCeEC-CEecc--CCCCcEEEEECCCCCcCC-CC-CcEEEEECCHHH-------HHHHHHHHhc
Confidence            99 999999999998543211 11110  001232233334569998 45 678888776542       4444433321


Q ss_pred             ------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC---CeEecCCC--c--eEEEe
Q 036024          154 ------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG---IKVYGGIN--A--PYVWA  214 (272)
Q Consensus       154 ------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---~~~~~~~~--~--~~~~i  214 (272)
                                  .....+.+...++...+     +.+++..++.+++++++.+.|++++   ..+.....  .  .++.+
T Consensus       219 g~~~~~~~~~~g~~~~~~~~~aa~~~~~l-----~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~  293 (377)
T 3ju7_A          219 GFDTNRECTMMGFNCKMSEYAAAIGIATM-----KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPI  293 (377)
T ss_dssp             TBCTTSCBCSSCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEE
T ss_pred             CCCCCCceeeccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEE
Confidence                        12223333333222222     3446677788888888888888874   22322111  1  23445


Q ss_pred             ecCCCC-hHHHHHHHHHhcCeEeeCCCC--CCC--------CC---------CCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          215 HFPGRK-SWDVFAEILEKTHITTVPGSG--FGP--------GG---------EEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       215 ~l~~~~-~~~~~~~ll~~~gi~v~~g~~--~~~--------~~---------~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      .+++.. ..++...| ++.||.+..+..  +..        .+         .+.+|++++  .+++|+++.++.|++++
T Consensus       294 ~~~~~~~~~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~  372 (377)
T 3ju7_A          294 LCPEEVRNKQVIEDL-KKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKV  372 (377)
T ss_dssp             ECCTTSCHHHHHHHH-HTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC--
T ss_pred             EeCChhhHHHHHHHH-HHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHH
Confidence            555422 45555555 555999977651  110        00         357888874  48999999999998754

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.66  E-value=1.7e-15  Score=129.72  Aligned_cols=238  Identities=12%  Similarity=0.093  Sum_probs=153.5

Q ss_pred             cccCccc-chHHhcccceeEEeecC--CCCC--cccC-CCC--CCCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcC
Q 036024            8 IVGQAGD-LEDEVGKYCNIEYLECG--PGNN--FFPD-LKG--TSRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNG   78 (272)
Q Consensus         8 ~~~~~~~-~~~~~~~~g~~~~~~~~--~~~~--~~~d-l~~--~~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~   78 (272)
                      +.+.+.. +...+++.|++..++.+  .+ |  ..++ ++.  .++++++++++.+|.||.. .+   +++|.     ++
T Consensus       122 ~~~~~~~~~~~~a~~~G~v~~v~~~~~~~-G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~p---i~~i~-----~g  192 (386)
T 3qm2_A          122 DAGYWAASAIKEAKKYCAPQIIDAKITVD-GKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDE---TPDFG-----PE  192 (386)
T ss_dssp             ESSHHHHHHHHHHTTTSEEEEEECEEEET-TEEEECCGGGCCCCTTCSCEEECSEETTTTEECCC---CCCCC-----TT
T ss_pred             eCCHHHHHHHHHHHHhCCeEEEecCcccC-CCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCc---hhhhc-----CC
Confidence            3444443 55566777777788876  33 4  3333 222  3789999999889999996 65   44443     79


Q ss_pred             CEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc---chHHHHHhhh--hh
Q 036024           79 SIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF---PVINDFNRII--CT  153 (272)
Q Consensus        79 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~---~~~~~~~~~~--~~  153 (272)
                      +++++|.+++.   +..+..+..++      +...|..|.+|.+|  +|+++++++.+....+   ...+ +....  ..
T Consensus       193 ~~~~vDa~qs~---g~~pidv~~~~------~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~-~~~~~~~~~  260 (386)
T 3qm2_A          193 VVVTADFSSTI---LSAPLDVSRYG------VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILD-YTVLNDNDS  260 (386)
T ss_dssp             CCEEEECTTTT---TSSCCCGGGCS------EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGC-HHHHHHC--
T ss_pred             CEEEEEccccc---CCCCCCccccC------EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHH-HHHHhhcCC
Confidence            99999999874   22233444442      45688999999778  8999998887532221   1111 11111  11


Q ss_pred             ccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEe-c-C--CCceEEEeecCC-CChHHHHHH
Q 036024          154 CFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASLGIKVY-G-G--INAPYVWAHFPG-RKSWDVFAE  227 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~-~--~~~~~~~i~l~~-~~~~~~~~~  227 (272)
                      ...+++.....++.++++..... .++++.++.++.++++++.|+++|+... . +  .....+.+.+++ ..+.++...
T Consensus       261 ~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~  340 (386)
T 3qm2_A          261 MFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLDKVFLEE  340 (386)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGGHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCccccHHHHHH
Confidence            22346666666666666533333 5788999999999999999999876322 1 1  234567778874 123455555


Q ss_pred             HHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          228 ILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                       ++++||.+.+|..+    .+.+|+|++  +|++|++.+++.|+++
T Consensus       341 -L~~~gI~~~~g~~~----~~~iRiS~~~~~t~edId~l~~~l~~~  381 (386)
T 3qm2_A          341 -SFAAGLHALKGHRV----VGGMRASIYNAMPIEGVKALTDFMIDF  381 (386)
T ss_dssp             -HHHTTEECCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             -HHHCCCEEeCCCCC----cCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence             56669999887644    245999974  5899999999999875

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.63  E-value=5.3e-14  Score=120.95  Aligned_cols=240  Identities=12%  Similarity=0.084  Sum_probs=144.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..+.+. +...+...| +++.++.+++ .+.+|++.     .+++++++++|   ++|...   ++++|.++|++
T Consensus        81 ~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~---~~~~i~~l~~~  153 (390)
T 3b8x_A           81 DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNPN---NFDEINKIIGG  153 (390)
T ss_dssp             CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCCC---CHHHHHHHHTT
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccChh---hHHHHHHHHHH
Confidence            55666666555 667777788 9999999865 45556433     25789999874   456554   49999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh---
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT---  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~---  153 (272)
                      +|+++|+|++|....... .   ..+....+...+....+|.++ +| +.|+++++++.+       .+.+......   
T Consensus       154 ~~~~li~D~a~~~g~~~~-~---~~~g~~~~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l-------~~~~~~~~~~g~~  220 (390)
T 3b8x_A          154 RDIILLEDNCESMGATFN-N---KCAGTFGLMGTFSSFYSNHIA-TM-EGGCIVTDDEEI-------YHILLCIRAHGWT  220 (390)
T ss_dssp             SCCEEEEECTTCTTCEET-T---EETTSSSSEEEEECCTTSSSC-SS-SCEEEEESCHHH-------HHHHHHHTBTTBS
T ss_pred             cCCEEEEECcCcccCEEC-C---cccccccceEEEEccCCCCCc-cC-CceEEEeCCHHH-------HHHHHHHHhcCCC
Confidence            999999999998432211 1   112111121122222345554 33 348988876331       2222221110   


Q ss_pred             ----------------------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEe
Q 036024          154 ----------------------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVY  204 (272)
Q Consensus       154 ----------------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  204 (272)
                                                  .....+.+...++...+     +++++..++.+++++++.+.|+++ |+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~  295 (390)
T 3b8x_A          221 RNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-----KKLPRFISVRRKNAEYFLDKFKDHPYLDVQ  295 (390)
T ss_dssp             TTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCSSEEEC
T ss_pred             ccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCcccC
Confidence                                        00113334333333322     455778889999999999999987 78776


Q ss_pred             cCC--Cce-EEEeecC---CCChHHHHHHHHHhcCeEeeC---CCCCCC-C----------C---------CCeEEEEc-
Q 036024          205 GGI--NAP-YVWAHFP---GRKSWDVFAEILEKTHITTVP---GSGFGP-G----------G---------EEYIRISG-  254 (272)
Q Consensus       205 ~~~--~~~-~~~i~l~---~~~~~~~~~~ll~~~gi~v~~---g~~~~~-~----------~---------~~~~R~s~-  254 (272)
                      .+.  .++ .+++.++   +.+..++...|. +.||.+.+   ++.+.. .          .         .+.+|+++ 
T Consensus       296 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  374 (390)
T 3b8x_A          296 QETGESSWFGFSFIIKKDSGVIRKQLVENLN-SAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNH  374 (390)
T ss_dssp             CCCSBCCCCEEEEEECTTSCCCHHHHHHHHH-HTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECC
T ss_pred             CCCCCcccEEEEEEecCcCcccHHHHHHHHH-HCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCC
Confidence            542  222 3556666   345566666664 55999986   332211 0          0         13589997 


Q ss_pred             -cCCHHHHHHHHHHHH
Q 036024          255 -FGHRESILEASRRLE  269 (272)
Q Consensus       255 -~~~~~~i~~~l~~l~  269 (272)
                       ..|++|++++++.|+
T Consensus       375 ~~~t~~di~~i~~~l~  390 (390)
T 3b8x_A          375 QIELFDEIDYLREVLK  390 (390)
T ss_dssp             SSCCHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHhhC
Confidence             458999999988763

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.56  E-value=7.1e-14  Score=122.12  Aligned_cols=207  Identities=15%  Similarity=0.155  Sum_probs=136.5

Q ss_pred             CceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.++++-.-+...|.+ .+++.+++|.++|++||+++|.||++.++...|.......+...+|.+    +++|.+| .|
T Consensus       226 ~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDiv----t~gK~lg-gg  300 (456)
T 4atq_A          226 QVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDII----TMAKGIA-GG  300 (456)
T ss_dssp             GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE----EECGGGG-TT
T ss_pred             ceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchh----hhhhccc-Cc
Confidence            45556555446666765 456789999999999999999999999876555444444444455532    5789998 89


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----  199 (272)
                      +.+|.++++++.        .+.+.......+++.++++..|+.+.++....   +...++.++..+++++.|+++    
T Consensus       301 ~P~~av~~~~~i--------~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~  369 (456)
T 4atq_A          301 LPLSAITGRADL--------LDAVHPGGLGGTYGGNPVACAAALAAIDTMEQ---HDLNGRARHIEELALGKLRELAAEL  369 (456)
T ss_dssp             SSCEEEEEEHHH--------HTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCceeeEecHHH--------HhcccccCCCCCCCCChHHHHhhHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999887        34444444556777889999988888873322   223445555555555555443    


Q ss_pred             C---CeEec--CCCceEEEeecCCC----C----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHH
Q 036024          200 G---IKVYG--GINAPYVWAHFPGR----K----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEA  264 (272)
Q Consensus       200 g---~~~~~--~~~~~~~~i~l~~~----~----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~  264 (272)
                      .   -.+.+  -..|.++.+++...    .    ...+...++++ |+.+.++...    .+.+||.  +..++++++++
T Consensus       370 ~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~-Gvl~~~~g~~----~~~irl~PpL~it~~~id~~  444 (456)
T 4atq_A          370 SAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKE-GVIILTCGTY----GNVIRLLPPLVISDELLIDG  444 (456)
T ss_dssp             C-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHT-TEECEEECTT----SCEEEECCCTTCCHHHHHHH
T ss_pred             ccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHC-CCEEEecCCC----CCEEEEECCCCCCHHHHHHH
Confidence            1   11111  01356666776311    1    23455566655 9998764322    3579998  46699999999


Q ss_pred             HHHHHHhC
Q 036024          265 SRRLEALF  272 (272)
Q Consensus       265 l~~l~~~l  272 (272)
                      +++|+++|
T Consensus       445 l~~l~~al  452 (456)
T 4atq_A          445 LEVLAAAI  452 (456)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998864

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.56  E-value=7.5e-14  Score=127.45  Aligned_cols=249  Identities=14%  Similarity=0.048  Sum_probs=142.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCccc---------CCCC-------CCCce---EEEEecCCCccccCC
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFP---------DLKG-------TSRTD---IIFFCSPNNPTGHAA   62 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~---------dl~~-------~~~~~---~i~~~~p~nptG~~~   62 (272)
                      |.|++..+... +...+...| ++++++.+.+ .+.+         |++.       .+++|   ++++++| ||+|.++
T Consensus       236 D~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~-~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~  313 (715)
T 3n75_A          236 STILIDRNCHKSLTHLMMMSDVTPIYFRPTRN-AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLY  313 (715)
T ss_dssp             CEEEEESSCCHHHHHHHHHSCCEEEEECCCBC-TTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEE
T ss_pred             CEEEECCCccHHHHHHHHHcCCEEEEEecccc-ccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccC
Confidence            45555554444 555566677 8888887643 3332         3222       23444   8999999 9999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEcccCCccc-cCCCCCCccccCC--CCCce-EEEecCccccCCCccceeEEEeccccccc
Q 036024           63 TQNQLEQLVEFARNNGSIIIFDSAYAAYV-TDGCPRSIYEIPG--AREVA-IEISSFSKFSGFTGVRLGWTVVPEELLFS  138 (272)
Q Consensus        63 ~~~~l~~l~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~--~~~~~-i~~~s~sK~~g~~g~r~G~~~~~~~~~~~  138 (272)
                      +   +++|+++|++++  +++||+|+... +.+.......+..  ..+.+ ++++|+||+++.+ ...|++.++++..  
T Consensus       314 d---l~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gl-tqgs~i~v~~~i~--  385 (715)
T 3n75_A          314 N---TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAF-SQASMIHVKGDVN--  385 (715)
T ss_dssp             C---HHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCC-TTCEEEEEESCCC--
T ss_pred             C---HHHHHHHhCcCc--EEEccccccccccCCccccccccccCcCCCEEEEEEecccccccCC-CCeeEEEeCchhh--
Confidence            8   777777776553  79999998543 3322111222221  13443 6699999998632 1358888877631  


Q ss_pred             CCcchHHHHHhhhhhccC-CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-----C--CeEecCCC--
Q 036024          139 SGFPVINDFNRIICTCFN-GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-----G--IKVYGGIN--  208 (272)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g--~~~~~~~~--  208 (272)
                           ...+......... +++.+...++..++..-.....++.++++.++.+++++.|+++     |  +++..++.  
T Consensus       386 -----~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~  460 (715)
T 3n75_A          386 -----EETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHID  460 (715)
T ss_dssp             -----HHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCC
T ss_pred             -----HHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCccccc
Confidence                 3344444433333 3444444433334332111233667888999999999998775     2  34433210  


Q ss_pred             ---------------------c------eEEEeecCCC----------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEE
Q 036024          209 ---------------------A------PYVWAHFPGR----------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIR  251 (272)
Q Consensus       209 ---------------------~------~~~~i~l~~~----------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R  251 (272)
                                           +      .=+.+..++.          -+...+.+.|+++||.+.-...+    .-.+-
T Consensus       461 ~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d~~----~vl~l  536 (715)
T 3n75_A          461 TTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPY----NLLFL  536 (715)
T ss_dssp             SCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEETT----EEEEE
T ss_pred             chhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecCCC----cEEEE
Confidence                                 0      0134444421          12234555557779988543322    12233


Q ss_pred             EEccCCHHHHHHHHHHHHHh
Q 036024          252 ISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       252 ~s~~~~~~~i~~~l~~l~~~  271 (272)
                      +|+..+++++++++++|.++
T Consensus       537 ~s~g~~~~~~~~L~~aL~~~  556 (715)
T 3n75_A          537 FSIGIDKTKALSLLRALTDF  556 (715)
T ss_dssp             CCTTCCHHHHHHHHHHHHHH
T ss_pred             eCCCCCHHHHHHHHHHHHHH
Confidence            44566888888888887653

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.56  E-value=5.3e-14  Score=122.50  Aligned_cols=200  Identities=16%  Similarity=0.207  Sum_probs=130.2

Q ss_pred             CCceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.+|++-..+...|.+. +++.+++|.++|++||+++|+||++.+ .. +.......+...+|.+    +++|.+| .
T Consensus       219 ~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R~-G~~~a~e~~gv~PDi~----t~gK~lg-g  291 (454)
T 4ao9_A          219 PEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-RL-APHGLANKLGIRSDLT----TLGKYIG-G  291 (454)
T ss_dssp             GGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-GG-STTCHHHHHTCCCSEE----EEEGGGG-T
T ss_pred             CceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-CC-ccccchhccCCCCcEE----EeccccC-C
Confidence            4566666644466667554 577899999999999999999999974 21 2122222233344532    6899998 8


Q ss_pred             ccceeEEEecccccccCCcchHHHHH----hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFN----RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS  198 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~  198 (272)
                      |+.+|+++++.+.        .+.+.    ......+++.++++..|+.+.|+....   ++..++++++.++|++.|++
T Consensus       292 G~Piga~~~~~ei--------~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~  360 (454)
T 4ao9_A          292 GMSFGAFGGRADV--------MALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFT---PEAAGALAERGEALRARLNA  360 (454)
T ss_dssp             TSSCEEEEECHHH--------HGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSC---HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcceeeeeHHHH--------HHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhc---cChhHHHHHHHHHHHHHHHH
Confidence            8999999999888        33332    122344556788888888888874332   34556677777777777765


Q ss_pred             C----CC--eEecCCCceEEEeecCC-----------CCh---HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCH
Q 036024          199 L----GI--KVYGGINAPYVWAHFPG-----------RKS---WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHR  258 (272)
Q Consensus       199 ~----g~--~~~~~~~~~~~~i~l~~-----------~~~---~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~  258 (272)
                      +    ++  .+.+  -|.++.+.+..           .+.   ..++..++++ ||++.|.        +.+.++...|+
T Consensus       361 l~~~~~~~~~vrg--~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~-Gv~~~p~--------~~~~~s~~~T~  429 (454)
T 4ao9_A          361 LCANEGVAMQFTG--IGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNE-DIYSSPR--------GFVVLSLPLTD  429 (454)
T ss_dssp             HHHHHTBSCEEEE--ETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHT-TEECCTT--------CEEECCTTCCH
T ss_pred             HHhhCCCCEEEee--eceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHC-CEEEcCC--------CCEEEeCCCCH
Confidence            4    32  3333  24444455421           111   2345566766 9998763        34556666799


Q ss_pred             HHHHHHHHHHHHhC
Q 036024          259 ESILEASRRLEALF  272 (272)
Q Consensus       259 ~~i~~~l~~l~~~l  272 (272)
                      +|+++++++|+++|
T Consensus       430 ~dId~~l~al~~~l  443 (454)
T 4ao9_A          430 ADIDRYVAAIGSFI  443 (454)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998864

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.48  E-value=4.4e-12  Score=108.27  Aligned_cols=234  Identities=13%  Similarity=0.107  Sum_probs=154.2

Q ss_pred             eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024           24 NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP   96 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~   96 (272)
                      +.++++++++ ...+|.++      ..+||+|++-...+|-=  ++   .+++.++|++.|+++++|.+|. +++.++..
T Consensus       177 ~~~~Y~vd~~-t~~IDyd~~~~~A~~~kPklIi~G~SaY~r~--id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~  250 (490)
T 3ou5_A          177 ESMPYKLNPK-TGLIDYNQLALTARLFRPRLIIAGTSAYARL--ID---YARMREVCDEVKAHLLADMAHISGLVAAKVI  250 (490)
T ss_dssp             ---CBCEETT-TTEECHHHHHHHHHHHCCSEEEECCSSCCSC--CC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSS
T ss_pred             cccccccCCC-CCcccHHHHHHHHhhcCCCeEEECCccCccc--cC---HHHHHHHHhhcccEEEechhhhhhhhccccc
Confidence            5667777766 44455333      37899999976666643  33   8889999999999999999996 66666655


Q ss_pred             CCccccCCCCCceEEEecCccccCCCccceeEEEeccccccc-------CCcchHHHHHhhhhhccCCcchHHHHHHHHh
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFS-------SGFPVINDFNRIICTCFNGASNIAQAGGLAC  169 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  169 (272)
                      ++.....   |  ++.+|.+|++  +|-|-|.|.++++....       ....+.+.+.+...+...+.+.....|+.++
T Consensus       251 psP~~~A---D--vVTtTTHKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAV  323 (490)
T 3ou5_A          251 PSPFKHA---D--IVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAV  323 (490)
T ss_dssp             CCGGGTC---S--EEEEESSSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHH
T ss_pred             CCccccc---e--EEeccccccc--cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHH
Confidence            5444432   2  8899999998  56677988887643110       0012355666665555544444444444433


Q ss_pred             -cccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCCC-ChHHHHHHHHHhcCeEee----CCCCC
Q 036024          170 -LSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPGR-KSWDVFAEILEKTHITTV----PGSGF  242 (272)
Q Consensus       170 -l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~----~g~~~  242 (272)
                       +.+......++..+++.+|++.|.+.|.+.|+++.. .-+...+++++... .+...++.+|++.||.++    |+. -
T Consensus       324 af~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D-~  402 (490)
T 3ou5_A          324 ALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGD-R  402 (490)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTC-C
T ss_pred             HHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCC-C
Confidence             433233456888999999999999999999999865 33466788898632 244567778889999986    333 1


Q ss_pred             CCCCCCeEEEEc------cCCHHHHHHHHHHHHHh
Q 036024          243 GPGGEEYIRISG------FGHRESILEASRRLEAL  271 (272)
Q Consensus       243 ~~~~~~~~R~s~------~~~~~~i~~~l~~l~~~  271 (272)
                      .+-.++.+|++.      .-.++|+.+..+.|.++
T Consensus       403 sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~  437 (490)
T 3ou5_A          403 SAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEG  437 (490)
T ss_dssp             CSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHH
Confidence            222356899994      22577887777776554

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.47  E-value=4.3e-14  Score=131.77  Aligned_cols=212  Identities=14%  Similarity=0.092  Sum_probs=130.9

Q ss_pred             CceEEEEecC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           45 RTDIIFFCSP-NNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        45 ~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++.++++-.. ++..|... +++.+++|.++|++||+++|+||++.++...|...........+|  +  .+++|.+| .
T Consensus       594 ~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PD--i--itlsK~L~-g  668 (831)
T 4a0g_A          594 HVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPD--I--ACFAKLLT-G  668 (831)
T ss_dssp             EEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCS--E--EEECGGGG-T
T ss_pred             cEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCc--E--EEEecccc-c
Confidence            4455555443 78888766 778899999999999999999999998765554333333333344  2  27999998 6


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH----HHHHHHHHHHHHH-HHHHHHHH
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL----EAVHSVVDYYKEN-TKILIDTL  196 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~-~~~l~~~L  196 (272)
                      | +++|+++++++..+.....  .....+....+++.+++++.++.+.++....    +.+.+..+++++. .+.+.+.+
T Consensus       669 G~~Plgav~~~~~i~~~~~~~--~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l  746 (831)
T 4a0g_A          669 GMVPLAVTLATDAVFDSFSGD--SKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQI  746 (831)
T ss_dssp             TSSCCEEEEECHHHHHTTCSS--CGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHH
T ss_pred             CccCcEEEEECHHHHHHHhcc--cccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7 7999999999873211000  0111122345566888888888887762111    1111111111110 12344455


Q ss_pred             HhC-CCeEecCCCceEEEeecCCC---------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHH
Q 036024          197 ASL-GIKVYGGINAPYVWAHFPGR---------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEA  264 (272)
Q Consensus       197 ~~~-g~~~~~~~~~~~~~i~l~~~---------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~  264 (272)
                      .+. .+..... .|.+..+++...         ....+...+++ .||.+.|+       .+.+|++  +..++++++++
T Consensus       747 ~~~~~v~~vrg-~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e-~Gv~v~p~-------g~~lrl~pp~~~t~e~id~~  817 (831)
T 4a0g_A          747 SSHSAVQRVVV-IGTLFALELKADASNSGYASLYAKSLLIMLRE-DGIFTRPL-------GNVIYLMCGPCTSPEICRRL  817 (831)
T ss_dssp             HHSTTEEEEEE-ETTEEEEEEC---------CHHHHHHHHHHHH-TTEECCCB-------TTEEEEECCTTCCHHHHHHH
T ss_pred             hhCCCceeEee-cccEEEEEEecCccccccchHHHHHHHHHHHH-CCcEEEec-------CCEEEEECCCCCCHHHHHHH
Confidence            555 3333332 466777777421         12345555655 49999874       2689998  46699999999


Q ss_pred             HHHHHHhC
Q 036024          265 SRRLEALF  272 (272)
Q Consensus       265 l~~l~~~l  272 (272)
                      +++|++++
T Consensus       818 ~~~l~~~l  825 (831)
T 4a0g_A          818 LTKLYKRL  825 (831)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998763

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.47  E-value=6.6e-13  Score=116.46  Aligned_cols=203  Identities=11%  Similarity=0.057  Sum_probs=134.0

Q ss_pred             CceEEEEecCCCccccCC-CHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAA-TQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.++++-..+...|++. +++.+++|.++|++||+++|.||+..+|...+.......+...+|.+    +++|.++ .|
T Consensus       236 ~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~----t~~K~l~-gG  310 (473)
T 4e3q_A          236 TIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAI----ISSKNLT-AG  310 (473)
T ss_dssp             GEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEE----EECGGGG-TT
T ss_pred             ceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChH----Hhccccc-CC
Confidence            344444444466667654 56679999999999999999999999876555444334444455533    5799998 66


Q ss_pred             -cceeEEEecccccccCCcchHHHHHh-------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 036024          124 -VRLGWTVVPEELLFSSGFPVINDFNR-------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT  195 (272)
Q Consensus       124 -~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  195 (272)
                       +.+|.++++++.        .+.+..       .....+++.++++..|+.+.++....   +...++.++..++|++.
T Consensus       311 ~~Pl~av~~~~~i--------~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~---~~l~~~~~~~g~~l~~~  379 (473)
T 4e3q_A          311 FFPMGAVILGPEL--------SKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMN---EGLAENVRRLAPRFEER  379 (473)
T ss_dssp             SSCCEEEEECHHH--------HHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHH---SSHHHHHHHHHHHHHHH
T ss_pred             CCCcccccccHHH--------HHHhccccccccccccCCCCCCCcchhhhhhhhhhhhcc---ccHHHHHHHHHHHHHHH
Confidence             899999999988        343322       22445666888888888888873332   33455566666777777


Q ss_pred             HHhC----CCeEecCCCceEEEeecC-CC----------C-hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCC
Q 036024          196 LASL----GIKVYGGINAPYVWAHFP-GR----------K-SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGH  257 (272)
Q Consensus       196 L~~~----g~~~~~~~~~~~~~i~l~-~~----------~-~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~  257 (272)
                      |+++    .+.-... .|.++-+++. +.          . ...+...++++ |+.+.|..       +.+|++  +..+
T Consensus       380 L~~l~~~~~v~~vRG-~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~g-------~~i~l~PPL~it  450 (473)
T 4e3q_A          380 LKHIAERPNIGEYRG-IGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDL-GLICRPLG-------QSVVLCPPFILT  450 (473)
T ss_dssp             HHHHTTSTTEEEEEE-ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TEECEEET-------TEEEECCCTTCC
T ss_pred             HHHHhcCCCeeEEee-cceEEEEEEecCccccccccccHHHHHHHHHHHHHC-CcEEEecC-------CEEEEeCCCCCC
Confidence            7654    2222221 3556666652 10          1 23355555555 99997642       468888  5679


Q ss_pred             HHHHHHHHHHHHHhC
Q 036024          258 RESILEASRRLEALF  272 (272)
Q Consensus       258 ~~~i~~~l~~l~~~l  272 (272)
                      ++++++++++|+++|
T Consensus       451 ~~eid~~~~~l~~al  465 (473)
T 4e3q_A          451 EAQMDEMFDKLEKAL  465 (473)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988764

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.12  E-value=2e-09  Score=92.40  Aligned_cols=240  Identities=14%  Similarity=0.063  Sum_probs=136.4

Q ss_pred             chHHhcccc-eeEEeecCCC-CCcccCCCC-------C-CCceEEEEecC-CCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024           15 LEDEVGKYC-NIEYLECGPG-NNFFPDLKG-------T-SRTDIIFFCSP-NNPTGHAATQNQLEQLVEFARNNGSIIIF   83 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~-~~~~~dl~~-------~-~~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~vi~   83 (272)
                      ....+...| +.++++...+ .....|++.       . .+..+++++++ .|..+.+   .++++|+++|++||+++++
T Consensus       175 v~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllV  251 (501)
T 3hl2_A          175 CFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIV  251 (501)
T ss_dssp             HHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEE
T ss_pred             HHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEE
Confidence            444555667 7777776322 145555333       1 24444444444 4534454   3599999999999999999


Q ss_pred             cccCCccccCCC--CCCccccCCCCCceEEEecCccccCCCccceeEEE-ecccccccCCcchHHHHHhhhhhccCCcch
Q 036024           84 DSAYAAYVTDGC--PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTV-VPEELLFSSGFPVINDFNRIICTCFNGASN  160 (272)
Q Consensus        84 D~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (272)
                      |++|+.......  +.....+. ..|  +++.|.+|.+-.| .. |+++ ..++..       +..+.....   ...+.
T Consensus       252 DeAhGah~~~~~~lp~sA~~~G-rAD--~vVqS~HK~llvp-IG-G~ii~~~d~e~-------l~~~~~~yP---Gr~S~  316 (501)
T 3hl2_A          252 NNAYGVQSSKCMHLIQQGARVG-RID--AFVQSLDKNFMVP-VG-GAIIAGFNDSF-------IQEISKMYP---GRASA  316 (501)
T ss_dssp             ECTTCTTCHHHHHHHHHHHHHS-CCC--EEEEEHHHHHCCC-SS-CEEEEESCHHH-------HHHHHHTSC---SCBCS
T ss_pred             eCcchhhhhhhhhhHHHHHhcC-CCc--EEEecccccceee-cC-ceEEEeCCHHH-------HHHHHHhCC---CCCCC
Confidence            999985331111  11222332 122  7888999988544 22 4444 444321       334332221   11222


Q ss_pred             HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCC-CceEEEeecCCC------ChHHHHHHHH
Q 036024          161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----GIKVYGGI-NAPYVWAHFPGR------KSWDVFAEIL  229 (272)
Q Consensus       161 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~-~~~~~~i~l~~~------~~~~~~~~ll  229 (272)
                      ...+.+...+...+.+.++++.++..+++++|++.|+++    |-++.... -..-+.+.+...      ...++...|.
T Consensus       317 Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf  396 (501)
T 3hl2_A          317 SPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLF  396 (501)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHHH
Confidence            333323344444555666888999999999999999885    55554432 233455555421      2345566665


Q ss_pred             Hhc--CeEe-eCCC----------CCCCC----CCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          230 EKT--HITT-VPGS----------GFGPG----GEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       230 ~~~--gi~v-~~g~----------~~~~~----~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+.  |-.+ .+|.          .|+..    ...++-++  +..+++|++.++++|++++
T Consensus       397 ~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~  458 (501)
T 3hl2_A          397 TRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCL  458 (501)
T ss_dssp             HTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             hcCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence            552  3334 3344          44432    14566665  4569999999999998763

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=98.95  E-value=2.2e-08  Score=86.64  Aligned_cols=241  Identities=13%  Similarity=0.027  Sum_probs=129.9

Q ss_pred             chHHhcccc-eeEEeecCC-CCCcccCCCC-------CC-CceEEEEecC-CCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024           15 LEDEVGKYC-NIEYLECGP-GNNFFPDLKG-------TS-RTDIIFFCSP-NNPTGHAATQNQLEQLVEFARNNGSIIIF   83 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~-~~~~~~dl~~-------~~-~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~vi~   83 (272)
                      ....+.-.| +.++++... +.....|++.       .+ +.+.+++.+| .+.+|.+-   ++++|+++|++||+++++
T Consensus       157 v~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~d---dl~~Ia~ia~~~gi~l~V  233 (450)
T 3bc8_A          157 CFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPD---RLEELAVICANYDIPHVV  233 (450)
T ss_dssp             HHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCC---CHHHHHHHHHHHTCCEEE
T ss_pred             HHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceec---CHHHHHHHHHHCCCeEEE
Confidence            445556677 777776532 1244555333       12 4566666666 44456664   599999999999999999


Q ss_pred             cccCCccccCCCCCCccccC-CCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHH
Q 036024           84 DSAYAAYVTDGCPRSIYEIP-GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA  162 (272)
Q Consensus        84 D~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (272)
                      |++|+.........+...+. +..|  .++.|.+|.++ .....+++...+...       ...+........  +++++
T Consensus       234 D~A~G~~~~~~~~l~~~a~~~~~AD--~~v~S~HK~l~-a~~~~~~l~~rd~~~-------~~~~~~~~~g~~--s~Sps  301 (450)
T 3bc8_A          234 NNAYGLQSSKCMHLIQQGARVGRID--AFVQSLDKNFM-VPVGGAIIAGFNEPF-------IQDISKMYPGRA--SASPS  301 (450)
T ss_dssp             ECTTTTTCHHHHHHHHHHHHHSCCC--EEEEEHHHHHS-CCSSCEEEEESCHHH-------HHHHHHHSCSCB--CSHHH
T ss_pred             ECCCchhhhhhHhHHHHHhcccCCC--EEEECCccCCC-chhccEEEEecCHHH-------HHHHHHHhhcCC--cccHH
Confidence            99998532211011101110 1123  67789999986 434456666643331       233322211111  23344


Q ss_pred             HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCC-ceEEEeecC------CCChHHHHHHHHHh
Q 036024          163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----GIKVYGGIN-APYVWAHFP------GRKSWDVFAEILEK  231 (272)
Q Consensus       163 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~-~~~~~i~l~------~~~~~~~~~~ll~~  231 (272)
                      ......++. .+.+.+.+..++..++++++++.++++    |..+.+.+. +.-..+.+.      +.+...+...+...
T Consensus       302 L~l~~~l~~-~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~  380 (450)
T 3bc8_A          302 LDVLITLLS-LGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTR  380 (450)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHT
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEecCC
Confidence            443444443 355556666667777788888888654    676665332 111223232      22444555554333


Q ss_pred             --cCeEeeC---------------CCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHh
Q 036024          232 --THITTVP---------------GSGFGPGGEEYIRIS--GFGHRESILEASRRLEAL  271 (272)
Q Consensus       232 --~gi~v~~---------------g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~  271 (272)
                        .|..+.+               |.........++=+.  +..+++++++++++|+++
T Consensus       381 g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~  439 (450)
T 3bc8_A          381 QVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKC  439 (450)
T ss_dssp             TCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHH
Confidence              1333331               111111223444444  456899999999998875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	272
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	8e-37
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	2e-36
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	3e-36
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	1e-29
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	5e-28
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	3e-21
d1v2da_	368	c.67.1.1 (A:) Glutamine aminotransferase {Thermus	1e-20
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	1e-19
d1wsta1	403	c.67.1.1 (A:13-415) Multiple substrate aminotransf	6e-19
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	5e-16
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	1e-15
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	5e-15
d3tata_	397	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	9e-14
d1u08a_	382	c.67.1.1 (A:) Putative methionine aminotransferase	1e-13
d7aata_	401	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chi	1e-13
d1w7la_	418	c.67.1.1 (A:) Kynurenine--oxoglutarate transaminas	2e-13
d1m7ya_	431	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	6e-13
d2gb3a1	389	c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotog	7e-13
d1iaya_	428	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	7e-13
d1bw0a_	412	c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Try	2e-12
d1c7na_	394	c.67.1.3 (A:) Cystalysin {Treponema denticola [Tax	2e-11
d2r5ea1	418	c.67.1.1 (A:12-429) Kynurenine--oxoglutarate trans	5e-11
d1vp4a_	420	c.67.1.1 (A:) Putative aminotransferase TM1131 {Th	1e-10
d1d2fa_	361	c.67.1.3 (A:) Modulator in mal gene expression, Ma	3e-10
d2aeua1	366	c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Ar	1e-08
d1lc5a_	355	c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxyl	1e-06

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score =  132 bits (332), Expect = 8e-37
 Identities = 58/258 (22%), Positives = 95/258 (36%), Gaps = 20/258 (7%)

Query: 22  YCNIEYLECGPGNNFFPDL-----KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76
              +  +E  P   F PD        T RT  +   SPNNPTG    +  LE L   A  
Sbjct: 136 GGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVE 195

Query: 77  NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
           +   ++ D  Y   + +G   S   +  A E  + ++  +K    TG R+G+   P+E+ 
Sbjct: 196 HDFYLVSDEIYEHLLYEGEHFSPGRV--APEHTLTVNGAAKAFAMTGWRIGYACGPKEV- 252

Query: 137 FSSGFPVINDFNRI--ICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194
                  I     +    T                        V    + Y+    +L++
Sbjct: 253 -------IKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLE 305

Query: 195 TLASLGIKVYGGINAPYVWAHFPGRKSWDV-FAEILEKTHITTVPGSGFGPGGEEYIRIS 253
            L +LG+K      A YV          +V  AE L +  +  VPG+ F   G  ++R+S
Sbjct: 306 GLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFG--HVRLS 363

Query: 254 GFGHRESILEASRRLEAL 271
                E++ +A  R   +
Sbjct: 364 YATSEENLRKALERFARV 381

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  131 bits (330), Expect = 2e-36
 Identities = 62/258 (24%), Positives = 102/258 (39%), Gaps = 15/258 (5%)

Query: 23  CNIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN 77
                +     + F  ++       T +T  +   SP NPTG   T+  LE++ +F   +
Sbjct: 132 GKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEH 191

Query: 78  GSIIIFDSAYAAYVTDGCPR-SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
             I+I D  Y  ++ D     SI  + G  E  I ++ FSK    TG RLG+   P  ++
Sbjct: 192 DLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWII 251

Query: 137 FSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL 196
                  + +    +      A+        A       +AV  +   Y    K++   L
Sbjct: 252 ERMVKFQMYNATCPVTFIQYAAAK-------ALKDERSWKAVEEMRKEYDRRRKLVWKRL 304

Query: 197 ASLGIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG 254
             +G+       A Y++      G  S      +L++  +  VPGS FG  GE Y+RIS 
Sbjct: 305 NEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISY 364

Query: 255 FGHRESILEASRRLEALF 272
               E + EA  R+E + 
Sbjct: 365 ATAYEKLEEAMDRMERVL 382

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score =  130 bits (328), Expect = 3e-36
 Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 21/260 (8%)

Query: 22  YCNIEYLECGPGNNFFPDL-----KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76
                 L       F           T +T ++ F +P+NPTG   T +++  + + A  
Sbjct: 135 EGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVE 194

Query: 77  NGSIIIFDSAYAAYVTD-GCPRSIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVVPEE 134
            G  ++ D  Y   + D     SI    P A E ++  S F+K    TG R+G+   P  
Sbjct: 195 AGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP 254

Query: 135 LLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILID 194
           L        +    +I     +     AQ G          + V  ++  + E  + ++D
Sbjct: 255 L--------VKAATKIQGHSTSNVCTFAQYGA-IAAYENSQDCVQEMLAAFAERRRYMLD 305

Query: 195 TLASL-GIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIR 251
            L ++ G++      A Y++      GR S D  +E+L++  + TVPG+ F  G ++ IR
Sbjct: 306 ALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAF--GADDCIR 363

Query: 252 ISGFGHRESILEASRRLEAL 271
           +S     ++I     RLE  
Sbjct: 364 LSYATDLDTIKRGMERLEKF 383

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score =  113 bits (284), Expect = 1e-29
 Identities = 44/281 (15%), Positives = 75/281 (26%), Gaps = 56/281 (19%)

Query: 22  YCNIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN 76
           +          G  +  +             I    SPNNP G           +  A  
Sbjct: 168 FREQTKYFDKKGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGL----------LRHAVI 217

Query: 77  NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL 136
            G   I+D  Y              I    +  I + + SKF+G +G R GW ++ +E  
Sbjct: 218 KGCKSIYDMVYYWP-------HYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKDE-- 268

Query: 137 FSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSS----------EGLEAVHSVVDYYK 186
                 V N+    +     G     Q   L  L               +         +
Sbjct: 269 -----SVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLR 323

Query: 187 ENTKILIDTLASLG---------------IKVYGGINAPYVWAHFPGRKSWDVFAEILEK 231
           E    +   L                    +     +  Y W      +  D + +  + 
Sbjct: 324 ERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCY-QTFQN 382

Query: 232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF 272
             I T  G GF      Y+R+S    ++   +    L+ + 
Sbjct: 383 GRINTQNGVGFEA-SSRYVRLSLIKTQDDFDQLMYYLKDMV 422

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score =  108 bits (270), Expect = 5e-28
 Identities = 56/233 (24%), Positives = 86/233 (36%), Gaps = 9/233 (3%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
           T RT  I   +PNNPTG    +  LE+++  A      +I D  Y     +G   S   +
Sbjct: 164 TDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSL 223

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162
                V I ++  SK    TG RLG+    +     S      D    I  C    +  A
Sbjct: 224 TKDVPV-IVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLC---PNTPA 279

Query: 163 QAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGINAPYVWAHFP---G 218
           Q   +A L+   ++ +   +   KE    +   L  +  I       A Y++        
Sbjct: 280 QFAAIAGLT-GPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPW 338

Query: 219 RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271
           +   +   ++L   H+  V GSGFG  G  + R       E + EA  R E  
Sbjct: 339 KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKF 391

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score = 89.7 bits (221), Expect = 3e-21
 Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 15/227 (6%)

Query: 45  RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG 104
           +T  +   SPNNPTG    +  LE LV  A+     II D  Y + V      SI ++  
Sbjct: 161 KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSE 220

Query: 105 AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQA 164
             +  + I+ FSK    TG R+G+ +  E++  +      +  + I              
Sbjct: 221 GFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQY-------- 272

Query: 165 GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDV 224
                           +V  +KE    +++ L  +G+K      A Y++    G      
Sbjct: 273 ----AALKALEVDNSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVRG-DDVKF 327

Query: 225 FAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271
              +LE+  +  VPGS F   G  ++R+S     E + EA  R+E  
Sbjct: 328 CERLLEEKKVALVPGSAFLKPG--FVRLSFATSIERLTEALDRIEDF 372

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 88.3 bits (217), Expect = 1e-20
 Identities = 45/228 (19%), Positives = 83/228 (36%), Gaps = 15/228 (6%)

Query: 46  TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA 105
           T  +   +P NPTG    + +LE +   AR +  + +        +  G           
Sbjct: 153 TRALLLNTPMNPTGLVFGERELEAIARLARAHD-LFLISDEVYDELYYGERPRRLREFA- 210

Query: 106 REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAG 165
            E    + S  K    TG R+GW V P+         +         T F+  + +    
Sbjct: 211 PERTFTVGSAGKRLEATGYRVGWIVGPK-------EFMPRLAGMRQWTSFSAPTPLQAGV 263

Query: 166 GLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVF 225
             A   +       ++ + Y+    +L   L ++G++VY      ++ A  PG   WD F
Sbjct: 264 AEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPG---WDAF 320

Query: 226 AEILEKTHITTVPGSGFGPG--GEEYIRISGFGHRESILEASRRLEAL 271
             ++E+  +  +P S F      ++  R +     E +  A  RL  +
Sbjct: 321 -RLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRV 367

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score = 85.4 bits (210), Expect = 1e-19
 Identities = 45/239 (18%), Positives = 71/239 (29%), Gaps = 25/239 (10%)

Query: 46  TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG---CPRSIYEI 102
           +  +     +NPTG   T  Q +Q+    +       FDSAY  + +        +I   
Sbjct: 184 SIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVP----EELLFSSGFPVINDFNRIICTCFNGA 158
                      SFSK  G    R+G   V     + +L                    GA
Sbjct: 244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGA 303

Query: 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP- 217
             +A+      L  E    V ++ D        L   L +L          P  W H   
Sbjct: 304 RIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKT--------PGTWNHITD 355

Query: 218 --GRKSW-----DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLE 269
             G  S+          ++ + HI  +P       G     +       SI EA  +++
Sbjct: 356 QIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVA--TSIHEAVTKIQ 412

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} Length = 403

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

 Score = 83.2 bits (204), Expect = 6e-19
 Identities = 38/229 (16%), Positives = 71/229 (31%), Gaps = 8/229 (3%)

Query: 46  TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGA 105
             +    +  NP G   + ++ ++L+E A     +I+ D  Y+     G P    +    
Sbjct: 172 KIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDD 231

Query: 106 REVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAG 165
               I + +FSK     G R+GW              +      I          IA   
Sbjct: 232 YGRVIYLGTFSK-ILAPGFRIGWVAAHPH----LIRKMEIAKQSIDLCTNTFGQAIAWKY 286

Query: 166 GLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVF 225
                  E +  +       ++     ++     G++        +V    P      + 
Sbjct: 287 VENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPEGIDTKLM 346

Query: 226 AEILEKTHITTVPGSGFG--PGGEEYIRIS-GFGHRESILEASRRLEAL 271
            E      +  VPG  F      +  +R++  +   E+I E  RRL   
Sbjct: 347 MERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAET 395

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score = 75.0 bits (183), Expect = 5e-16
 Identities = 38/243 (15%), Positives = 69/243 (28%), Gaps = 22/243 (9%)

Query: 22  YCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
           Y   E              K    +  +     +NPTG   T  Q  Q+V+   +   I 
Sbjct: 153 YWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIA 212

Query: 82  IFDSAYAAYVTDGCP------RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEEL 135
           +FD+AY  + T          R   E            SF+K +G  G R+G   +    
Sbjct: 213 LFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTK 272

Query: 136 LFSSGFPVINDFNRII--------CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKE 187
              +        +++              GA  +A+      L+ +  + + ++     +
Sbjct: 273 QAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITK 332

Query: 188 NTKILIDTLASLGIKVYGGINAP----YVWAHFPGRKSWDVFAEILEKTHITTVPGSGFG 243
               L D L  LG              + +          +   + E   +  V      
Sbjct: 333 MRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTP----QMVKRLEETHAVYLVASGRAS 388

Query: 244 PGG 246
             G
Sbjct: 389 IAG 391

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score = 73.9 bits (180), Expect = 1e-15
 Identities = 32/206 (15%), Positives = 66/206 (32%), Gaps = 14/206 (6%)

Query: 45  RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC--PRSIYEI 102
              ++F    +NPTG   T  Q + L + +   G + +FD AY  +          +   
Sbjct: 172 GDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAF 231

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVP----EELLFSSGFPVINDFNRIICTCFNGA 158
               +  I  SS+SK  G    R+G   +     E +  +                 +GA
Sbjct: 232 AAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGA 291

Query: 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAP----YVWA 214
           S +A       L +   + +  +    +   ++ ++TL   G              + ++
Sbjct: 292 SVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFS 351

Query: 215 HFPGRKSWDVFAEILEKTHITTVPGS 240
                   +    + E+  +  V   
Sbjct: 352 GLTK----EQVLRLREEFGVYAVASG 373

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score = 72.0 bits (175), Expect = 5e-15
 Identities = 31/210 (14%), Positives = 58/210 (27%), Gaps = 22/210 (10%)

Query: 45  RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA--AYVTDGCPRSIYEI 102
              ++     +NPTG   T +Q  ++       G++ + D AY       +        I
Sbjct: 169 GDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLI 228

Query: 103 PGAREVAIEISSFSKFSGFTGVRL----GWTVVPEELLFSSGFPVINDFNRIICTCFNGA 158
                  +  +S SK  G    R                + G     +        F+GA
Sbjct: 229 ASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGA 288

Query: 159 SNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP- 217
             ++       L ++ +  + +V        + L   L  L             +     
Sbjct: 289 KIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLS--------GSDRFGFVAE 340

Query: 218 --GRKSW----DVFAEIL-EKTHITTVPGS 240
             G  S         + + E+  I  V  S
Sbjct: 341 HRGMFSRLGATPEQVKRIKEEFGIYMVGDS 370

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

 Score = 68.5 bits (166), Expect = 9e-14
 Identities = 33/208 (15%), Positives = 66/208 (31%), Gaps = 8/208 (3%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG--CPRSIY 100
            +R+ ++     +NPTG   T +Q + ++E  +    I   D AY  +         +I 
Sbjct: 171 PARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIR 230

Query: 101 EIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN 160
            I  A   A+  +SFSK     G R+G   V  E   ++G  +      +     +  + 
Sbjct: 231 AIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNF 290

Query: 161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRK 220
            AQ             +  + V+  +     +   L    +             +  G  
Sbjct: 291 GAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVK-VLSTEMPERNFDYLLNQRGMF 349

Query: 221 SW-----DVFAEILEKTHITTVPGSGFG 243
           S+          + E+  +  +      
Sbjct: 350 SYTGLSAAQVDRLREEFGVYLIASGRMC 377

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

 Score = 67.8 bits (164), Expect = 1e-13
 Identities = 44/233 (18%), Positives = 87/233 (37%), Gaps = 15/233 (6%)

Query: 45  RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRS-IYEIP 103
           RT ++   +P+NP+     Q     L +    +   +I D  Y          + +   P
Sbjct: 159 RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHP 218

Query: 104 GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQ 163
             RE A+ +SSF K    TG ++G+ V             I+   R +      + N   
Sbjct: 219 QLRERAVAVSSFGKTYHMTGWKVGYCV---------APAPISAEIRKVHQYLTFSVNTPA 269

Query: 164 AGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRK--- 220
              LA +     E   ++ D+Y++   IL++ L    +++       ++   +       
Sbjct: 270 QLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLD 329

Query: 221 SWDVFAEILEKTHITTVPGSGFG--PGGEEYIRISGFGHRESILEASRRLEAL 271
             +    + ++  +  +P S F   P   + IR+       ++L A+ RL  L
Sbjct: 330 DVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL 382

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

 Score = 67.7 bits (164), Expect = 1e-13
 Identities = 37/213 (17%), Positives = 62/213 (29%), Gaps = 23/213 (10%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG---CPRSI 99
             ++ I+     +NPTG    Q Q ++L    +    +  FD AY  + +        ++
Sbjct: 173 PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWAL 232

Query: 100 YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVP----EELLFSSGFPVINDFNRIICTCF 155
                     +   S++K  G  G R G   V     EE         I           
Sbjct: 233 RHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPM 292

Query: 156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAH 215
           NGA   +       L  E L  V  + D        L+  L   G        + + W H
Sbjct: 293 NGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEG--------SSHNWQH 344

Query: 216 FP---GRKSW-----DVFAEILEKTHITTVPGS 240
                G   +     +    + ++  I      
Sbjct: 345 ITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDG 377

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.1 bits (162), Expect = 2e-13
 Identities = 42/246 (17%), Positives = 80/246 (32%), Gaps = 22/246 (8%)

Query: 46  TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP-RSIYEIPG 104
           T  +   +PNNP G   ++ +LE +    + +  + I D  Y   V DG    SI  +PG
Sbjct: 172 TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPG 231

Query: 105 AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQA 164
             E  + I S  K    TG ++GW + P+          ++  +   C   + A+     
Sbjct: 232 MWERTLTIGSAGKTFSATGWKVGWVLGPDH--IMKHLRTVHQNSVFHCPTQSQAAVAESF 289

Query: 165 GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG------ 218
                L  +            +     +I +L S+G+K      + ++            
Sbjct: 290 EREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDISDFKRKMP 349

Query: 219 --------RKSWDVFAEILEKTHITTVPGSGFG-----PGGEEYIRISGFGHRESILEAS 265
                            +++   +  +P S F         + YIR        ++    
Sbjct: 350 DLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMD 409

Query: 266 RRLEAL 271
            +L   
Sbjct: 410 EKLRKW 415

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

 Score = 65.8 bits (159), Expect = 6e-13
 Identities = 26/187 (13%), Positives = 61/187 (32%), Gaps = 17/187 (9%)

Query: 95  CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC 154
             R+  E     +    + S SK  G  G R+G     ++++ ++   + +       T 
Sbjct: 249 KDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQ 308

Query: 155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWA 214
              ++ ++         +E  + +           +         GI    G    + W 
Sbjct: 309 HLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-------GISCLNGNAGLFCWV 361

Query: 215 HFPG-------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGH--RESILEAS 265
                          +++ +I+ + H+   PGS        + R+  F +    ++  A 
Sbjct: 362 DMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC-FANLPERTLDLAM 420

Query: 266 RRLEALF 272
           +RL+A  
Sbjct: 421 QRLKAFV 427

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Length = 389

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

 Score = 65.6 bits (158), Expect = 7e-13
 Identities = 51/259 (19%), Positives = 82/259 (31%), Gaps = 19/259 (7%)

Query: 22  YCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
                 +E G       +     RT  I   +P NPTG    ++++  LVE A  +G  +
Sbjct: 136 IPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFL 195

Query: 82  IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF 141
           I D  Y+  V  G   S   I    +  + I S SK     G R+G  +   E L S   
Sbjct: 196 IVDEVYSEIVFRGEFASALSIE--SDKVVVIDSVSKKFSACGARVGCLITRNEELISHAM 253

Query: 142 PVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI 201
            +             G+  +                      Y +    +L         
Sbjct: 254 KLAQGRLAPPLLEQIGSVGLLNLDDSFF--------DFVRETYRERVETVLKKLEEHGLK 305

Query: 202 KVYGGINAPYVWAHFPGRKSWDVFAEIL-----EKTHITTVPGSGFGPG---GEEYIRIS 253
           +      A Y+ A  P   + +    +L     +       P  GF      G++ IRI+
Sbjct: 306 RFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIA 365

Query: 254 GFGHRESILEASRRL-EAL 271
               ++ +  A   L E L
Sbjct: 366 CVLEKDLLSRAIDVLMEGL 384

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 428

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

 Score = 65.4 bits (158), Expect = 7e-13
 Identities = 43/266 (16%), Positives = 86/266 (32%), Gaps = 25/266 (9%)

Query: 22  YCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
             N +         +    K   +   +   +P+NP G    ++ L+ ++ F   +   +
Sbjct: 165 SNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHL 224

Query: 82  IFDSAYAAYVTDG-CPRSIYEIPGAREVA-------IEISSFSKFSGFTGVRLGWTVVPE 133
           + D  YAA V D     SI EI   +E+          + S SK  G  G R+G      
Sbjct: 225 VCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFN 284

Query: 134 ELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILI 193
           + + +    + +       T +  A+ ++    +          +        +  K   
Sbjct: 285 DDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDN-------FLRESAMRLGKRHKHFT 337

Query: 194 DTLASLGIKVYGGINAPYVWAHFPG-------RKSWDVFAEILEKTHITTVPGSGFGPGG 246
           + L  +GIK        + W                 ++  I+    +   PGS F    
Sbjct: 338 NGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQE 397

Query: 247 EEYIRISGFGH--RESILEASRRLEA 270
             + R+  F +    ++  A  R+  
Sbjct: 398 PGWFRVC-FANMDDGTVDIALARIRR 422

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 64.5 bits (155), Expect = 2e-12
 Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 12/163 (7%)

Query: 115 FSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEG 174
            +K     G RLGW +  +        P   +  + +     G   + QA     L +  
Sbjct: 248 TAKNLVVPGWRLGWLLYVDPHG---NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTP 304

Query: 175 LEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRK------SWDVFAE 227
            E +  +V   +E+   L + +    G+       A Y+ +     K        + F +
Sbjct: 305 QEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEK 364

Query: 228 ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEA 270
           +LE+ ++  +PG+ F      + R++     E   EA  R++A
Sbjct: 365 LLEEENVQVLPGTIF--HAPGFTRLTTTRPVEVYREAVERIKA 405

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

 Score = 61.0 bits (146), Expect = 2e-11
 Identities = 35/253 (13%), Positives = 74/253 (29%), Gaps = 5/253 (1%)

Query: 22  YCNIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII 81
               +             L        + FCSP+NP G    +++L+++ +    +  ++
Sbjct: 141 ELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLML 200

Query: 82  IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF 141
             D  +   +  G   ++++    +     I+  +    F    +G + +      +   
Sbjct: 201 WSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIII---KNPDI 257

Query: 142 PVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI 201
                 +R   +     +   +A  +              V    +        +    I
Sbjct: 258 RERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEI 317

Query: 202 KVYGGINAPYVWAHFPGRK--SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRE 259
           K          W  F   K     +   ++ K  I    G  FG GG  + RI+      
Sbjct: 318 KAPLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSS 377

Query: 260 SILEASRRLEALF 272
            I E+  RL    
Sbjct: 378 VIQESLERLNKAL 390

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

 Score = 60.2 bits (144), Expect = 5e-11
 Identities = 43/245 (17%), Positives = 80/245 (32%), Gaps = 21/245 (8%)

Query: 46  TDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRS-IYEIPG 104
           T +I   +P+NP G    + +LE +    +    + + D  Y   V +      I  +PG
Sbjct: 172 TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG 231

Query: 105 AREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQA 164
             E  I I S  K    TG ++GW   PE         +++      C      +     
Sbjct: 232 MWERTITIGSAGKTFSLTGWKIGWAYGPEA--LLKNLQMVHQNCVYTCATPIQEAIAVGF 289

Query: 165 GGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG------ 218
                         +S+          +   LA +G+         ++ A +        
Sbjct: 290 ETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVD 349

Query: 219 -------RKSWDVFAEILEKTHITTVPGSGFGPG-----GEEYIRISGFGHRESILEASR 266
                  RK +     + +   +  +P S F        GE+++R   F   E++ +A+ 
Sbjct: 350 LTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAE 409

Query: 267 RLEAL 271
            L   
Sbjct: 410 ILRKW 414

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]} Length = 420

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

 Score = 59.0 bits (141), Expect = 1e-10
 Identities = 44/245 (17%), Positives = 78/245 (31%), Gaps = 6/245 (2%)

Query: 30  CGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA 89
               + F  + K      I    + +NP G   +  + + LVE A      I+ D  Y A
Sbjct: 168 ERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGA 227

Query: 90  YVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR 149
              +G         G  E  + +++FSK     G+R+G     +E +        +    
Sbjct: 228 LRYEGETVDPIFKIGGPERVVLLNTFSKVL-APGLRIGMVAGSKEFIRKIVQAKQSADLC 286

Query: 150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINA 209
                   A+   +   L       +E             +     +   G+K       
Sbjct: 287 SPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIP--GVKWVKSEGG 344

Query: 210 PYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEE--YIRIS-GFGHRESILEASR 266
            ++W   P         E  ++  +  VPG  F    E    +R+S      E I+E  +
Sbjct: 345 LFIWLTLPEGFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIK 404

Query: 267 RLEAL 271
           RL  +
Sbjct: 405 RLREV 409

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

 Score = 57.6 bits (137), Expect = 3e-10
 Identities = 9/66 (13%), Positives = 22/66 (33%), Gaps = 2/66 (3%)

Query: 209 APYVWAHFP--GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASR 266
               W            +   ++E+  +  +PG  +G  G  ++R++    R  + +   
Sbjct: 292 TYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVA 351

Query: 267 RLEALF 272
            L    
Sbjct: 352 GLINAI 357

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 366

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 53.0 bits (126), Expect = 1e-08
 Identities = 30/239 (12%), Positives = 64/239 (26%), Gaps = 23/239 (9%)

Query: 43  TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI 102
              T +I   S  +           ++++  A+N  +I+  D A  A V     +     
Sbjct: 131 DKDTLVIITGSTMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALK 188

Query: 103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIA 162
            GA  V        +      +     +V +          I                  
Sbjct: 189 LGADLVVTSTDKLMEGPRGGLLAGKKELVDK----------IYIEGTKFGLEAQPPLLAG 238

Query: 163 QAGGLACLSSEGLEAVHS----VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG 218
               L   + E +               E     +  +      VY      +V      
Sbjct: 239 IYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYK 298

Query: 219 RKSWDV-----FAE-ILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271
             + ++         +L+   I T+  +G  PG  + +RI         ++ +  ++A+
Sbjct: 299 DDTINIKKLIEIGFNLLKNYGIITITVAGM-PGASKSLRIDLTSRDAERIDDNYIIKAI 356

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]} Length = 355

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

 Score = 46.7 bits (109), Expect = 1e-06
 Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 7/93 (7%)

Query: 179 HSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVP 238
            +     +E  +          + VY G  A Y+      R+  D+   +L +  I    
Sbjct: 266 ATWHWLREEGARFYQALCQLPLLTVYPG-RANYLLLRCE-REDIDLQRRLLTQ-RILIRS 322

Query: 239 GSGFGPGGEEYIRISGFGHRESILEASRRLEAL 271
            + +      Y R++         +  R L AL
Sbjct: 323 CANYPGLDSRYYRVA-IRSAA---QNERLLAAL 351

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	272
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	100.0
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	100.0
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	100.0
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	100.0
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	100.0
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	100.0
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	100.0
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	100.0
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	100.0
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	100.0
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	100.0
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	100.0
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	100.0
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	100.0
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	100.0
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	100.0
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	100.0
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	99.98
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.98
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.89
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.87
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.85
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.85
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.84
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.84
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.82
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.81
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.8
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.76
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.72
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.71
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.68
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.63
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.63
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.63
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.61
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.61
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.61
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.6
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.59
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.59
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.57
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.56
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.56
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.55
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.51
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.5
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.47
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.47
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.47
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.46
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.45
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.45
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.44
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.43
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.41
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.41
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.39
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.39
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.39
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	99.38
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.37
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.33
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.32
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.3
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.3
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.29
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.28
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.24
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.22
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.21
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.15
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.14
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.08
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	98.92
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	98.86
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	98.74
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	98.53
d2gjxa1	362	beta-hexosaminidase A {Human (Homo sapiens) [TaxId	86.12
d1yhta1	344	Dispersin B, DspB {Actinobacillus actinomycetemcom	83.34
d1jaka1	356	beta-N-acetylhexosaminidase {Streptomyces plicatus	82.66

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=2.9e-45  Score=314.58  Aligned_cols=261  Identities=26%  Similarity=0.355  Sum_probs=230.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...++..| +++.+|++++++|.+|+++     .+++++++++|||||||.+++.+++++|+++|++
T Consensus       111 d~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~  190 (388)
T d1gdea_         111 EEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVE  190 (388)
T ss_dssp             CEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCCCHHHHHHhCccCCeEEEECCCcCCCCCcCCHHHHHHHHHHHHH
Confidence            66778777776 888999999 9999999988889888655     3778999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      ++++||+||+|.++.+++. ..++..+.+..+++++++||||.||+||+|+||++++++.        ...+........
T Consensus       191 ~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ii~~~~~--------~~~~~~~~~~~~  262 (388)
T d1gdea_         191 HDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI--------IERMVKFQMYNA  262 (388)
T ss_dssp             TTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHH--------HHHHHHHHHTTT
T ss_pred             cCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChhhccCccccEEEEEeeccc--------hhhhhhcccccc
Confidence            9999999999999887754 4566677666789999999999999999999999999988        667777777777


Q ss_pred             CCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC--CCChHHHHHHHHHhc
Q 036024          156 NGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--GRKSWDVFAEILEKT  232 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~~  232 (272)
                      ..++.+.|.++..++.+... ++.++.++.+++++..+.+.|...++.+..|++|+|+|++++  +.+..++...+++++
T Consensus       263 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~ll~e~  342 (388)
T d1gdea_         263 TCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEA  342 (388)
T ss_dssp             CSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHT
T ss_pred             ccccccchhhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhhhhccccccCCCceEEEEEECCCCCCCHHHHHHHHHHhC
Confidence            77888999988888875444 678888899999999999999999999988999999999997  457788888999999


Q ss_pred             CeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          233 HITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       233 gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ||.+.||+.|+..+++++|+|++.+++++++++++|+++|
T Consensus       343 gV~v~PG~~F~~~~~~~iRis~~~~~e~l~~al~rL~~~l  382 (388)
T d1gdea_         343 RVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVL  382 (388)
T ss_dssp             CEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             CEEEEechhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            9999999999987789999999888999999999998864

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.2e-44  Score=305.68  Aligned_cols=257  Identities=24%  Similarity=0.315  Sum_probs=217.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...++..| +++.+|+.+++++.+|++.     .+++++++++|||||||.+++.+++++|+++|++
T Consensus       116 d~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~  195 (382)
T d1b5pa_         116 DEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVE  195 (382)
T ss_dssp             CEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCCCCCeEEEECCCCCCcchhCCHHHHHHHHHHHHH
Confidence            66777777776 888999999 9999999988888888543     3678899999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      ++++||+||+|.++.+++.+.+....  .++++++++|+||.|++||+|+||++++++.        ++.+.........
T Consensus       196 ~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~~~~GlR~G~~~~~~~~--------i~~~~~~~~~~~~  265 (382)
T d1b5pa_         196 HDFYLVSDEIYEHLLYEGEHFSPGRV--APEHTLTVNGAAKAFAMTGWRIGYACGPKEV--------IKAMASVSRQSTT  265 (382)
T ss_dssp             TTCEEEEECTTTTCBSSSCCCCGGGT--CTTTEEEEEESTTTTTCGGGCCEEEECCHHH--------HHHHHHHHHTTTC
T ss_pred             cCeEEEEEccccceecCCCCCCHHHc--CCCCEEEEecchhhccCcHhheEEEEECHHH--------HHHHHHHHHhccc
Confidence            99999999999999988765554443  4578999999999999999999999999888        6677777777777


Q ss_pred             CcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC-CChHHHHHHHHHhcC
Q 036024          157 GASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTH  233 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~g  233 (272)
                      .++.+.|.++...+.....  .+.+..++.++++++.+.+.+...|+.+..|++|+|+|+++++ ..+.+.+.+++.++|
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~l~e~g  345 (382)
T d1b5pa_         266 SPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAG  345 (382)
T ss_dssp             SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTT
T ss_pred             CcccccccccccccccccchhHHHHHHHHHHHhhhhHHHHHHhhcCCeEecCCceEEEeEeCCCCCCCHHHHHHHHHHCC
Confidence            7888888877777764332  6778888999999999999999999999999999999999963 233444444455669


Q ss_pred             eEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          234 ITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       234 i~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      |.+.||+.|+.  ++++|++++.++|++++++++|+++|
T Consensus       346 V~v~PG~~F~~--~~~iRis~~~~~e~l~~al~rl~~~L  382 (382)
T d1b5pa_         346 VAVVPGTDFAA--FGHVRLSYATSEENLRKALERFARVL  382 (382)
T ss_dssp             EECEESGGGTC--TTEEEEECCSCHHHHHHHHHHGGGGC
T ss_pred             EEEEeCcccCC--CCeEEEEEcCCHHHHHHHHHHHHHhC
Confidence            99999999985  57999999889999999999999986

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=100.00  E-value=1.8e-43  Score=303.18  Aligned_cols=258  Identities=24%  Similarity=0.378  Sum_probs=221.4

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|.+. |...++..| +++.++...+++|.+|+++     .+++++++++|||||||.+++.+++++|+++|++
T Consensus       115 d~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~  194 (388)
T d1j32a_         115 DEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVE  194 (388)
T ss_dssp             CEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCCCCCeEEEECCCCCCCCcccchhhhhhhhccccc
Confidence            67788777666 888888788 9999999988888888554     3688999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccC-CCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIP-GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (272)
                      +++++|+||+|.++.+++. ..++.... ...+++++++|+||.|++||+|+||+++++++        ++.+.+.....
T Consensus       195 ~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~GlRvG~~~~~~~~--------~~~~~~~~~~~  266 (388)
T d1j32a_         195 AGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPL--------VKAATKIQGHS  266 (388)
T ss_dssp             HTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHH--------HHHHHHHHHTT
T ss_pred             CCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCChhhhhcchhHeEEEEECHHH--------HHHHHHhhhhc
Confidence            9999999999998888764 33443332 12367899999999999999999999999888        66676666666


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC--CCChHHHHHHHHHh
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP--GRKSWDVFAEILEK  231 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~--~~~~~~~~~~ll~~  231 (272)
                      ...++...|.++...+. ...+++++.++.++++++.+.+.|++. |+.+..|++|+|+|++++  ..++.+++.+++++
T Consensus       267 ~~~~~~~~q~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~gg~~l~~~l~~~~~~~~~~~~~ll~~  345 (388)
T d1j32a_         267 TSNVCTFAQYGAIAAYE-NSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQ  345 (388)
T ss_dssp             TCSCCHHHHHHHHHHHH-SCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHH
T ss_pred             cccccHHHHHHHhhccc-chHHHHHHHHHHHHHHHHHHHHHHHhCCCCEecCCCceEEEEEECCCCCCCHHHHHHHHHHh
Confidence            66788899998888877 345788999999999999999999988 899999999999999997  45677889999999


Q ss_pred             cCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      +||.+.||+.|+.  ++++|++++.+++++++++++|+++|
T Consensus       346 ~gV~v~pG~~F~~--~~~~Rls~~~~~e~l~~al~rl~~~l  384 (388)
T d1j32a_         346 HQVATVPGAAFGA--DDCIRLSYATDLDTIKRGMERLEKFL  384 (388)
T ss_dssp             HCEECEEGGGGTC--TTBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeccccCC--CCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence            9999999999975  68999999889999999999999864

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=2.2e-43  Score=303.38  Aligned_cols=264  Identities=22%  Similarity=0.245  Sum_probs=219.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...+...| +++.++...+++|.+|++.     .+++++++++|||||||.+++.+++++|+++|++
T Consensus       118 d~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~  197 (395)
T d1xi9a_         118 DEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGE  197 (395)
T ss_dssp             CEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEcCCccccchhhhhhcCCEEEEEeccccccccchHHHHHHhhcccccEEEecCCCCCccchhhHHHHHHHHhhhhh
Confidence            56888888877 888889999 9999999888899998554     3788999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      +++++|+||+|.++.+++...+..... ..+++|+++||||.|++||+|+||++++....  .... .............
T Consensus       198 ~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~~~~GlRvG~~~~~~~~~--~~~~-~~~~~~~~~~~~~  273 (395)
T d1xi9a_         198 YEIPVISDEIYDLMTYEGEHISPGSLT-KDVPVIVMNGLSKVYFATGWRLGYMYFVDPEN--KLSE-VREAIDRLARIRL  273 (395)
T ss_dssp             HTCCEEEECTTTTCBSSSCCCCHHHHC-SSSCEEEEEESTTTTCCGGGCCEEEEEECTTC--TTHH-HHHHHHHHHHHTC
T ss_pred             cCeeEEeccccccccccccccchhhcC-CCCCEEEEeCcchhcccchhhcEeeEecCHHH--HHHH-HHHHHHHhhcCCC
Confidence            999999999999988877655555554 35689999999999999999999987754321  0011 1222222334445


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCceEEEeecCC---CChHHHHHHHHHhc
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGINAPYVWAHFPG---RKSWDVFAEILEKT  232 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~~  232 (272)
                      .++.++|.++..++.. ..+++++.++.++++++.+.+.|.+++ +.+..|++|+|+|++++.   .++.+++.++++++
T Consensus       274 ~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~ll~~~  352 (395)
T d1xi9a_         274 CPNTPAQFAAIAGLTG-PMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNA  352 (395)
T ss_dssp             CSCSHHHHHHHHHHHS-CCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHhCCCceecCCCeeEEEeEECCCCCCCCHHHHHHHHHHhC
Confidence            5788899988888873 457889999999999999999999984 677888899999999973   46778899999999


Q ss_pred             CeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          233 HITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       233 gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ||.+.||+.|++.+++++|++++.+++++++++++|+++|
T Consensus       353 gV~v~PG~~Fg~~~~~~~Ris~~~~~e~l~eal~rl~~~l  392 (395)
T d1xi9a_         353 HVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFM  392 (395)
T ss_dssp             CEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             CEEEEcChhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            9999999999987889999999889999999999999874

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.4e-41  Score=290.23  Aligned_cols=254  Identities=25%  Similarity=0.372  Sum_probs=218.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |.......| ..+.++.++++++.+|.+.     .+++++++++|||||||.+++.+++++|+++|++
T Consensus       113 d~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~  192 (375)
T d1o4sa_         113 DEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKK  192 (375)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEccCccccchhhhhccccccccccccccccccchhHHHHHhhccCccEEEEeCCCCCccCCCCHHHHHHHHHhHHH
Confidence            56777777666 777778888 9999999988888887443     4788999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccC
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFN  156 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
                      |+++||+||+|.++.+++.........+..+++++++|+||.+|+||+|+||++++++.        ++.+.........
T Consensus       193 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~R~G~~~~~~~~--------~~~~~~~~~~~~~  264 (375)
T d1o4sa_         193 RNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKV--------ATAVSKIQSHTTS  264 (375)
T ss_dssp             HTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHH--------HHHHHHHHHHHTC
T ss_pred             cCCceehHhhhccccccccccccccccCCCCCEEEEeechhhccCCccccccccccccc--------hhhhhhhhccccc
Confidence            99999999999998888766666666667789999999999999999999999999988        5666666666666


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT  236 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v  236 (272)
                      ..+...+.+....+....    ...++.++++++.+.+.|++.|+++..|++|+|+|+.+++ ++.+++.++++++||.+
T Consensus       265 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~r~~~~~~~l~~~g~~~~~p~gg~f~~~~~~~-~~~~~~~~ll~~~gV~v  339 (375)
T d1o4sa_         265 CINTVAQYAALKALEVDN----SYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVRG-DDVKFCERLLEEKKVAL  339 (375)
T ss_dssp             SCCHHHHHHHHHHTTCCC----HHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEECSS-CHHHHHHHHHHHHCEEC
T ss_pred             cccccchhhhhhhcccch----hhhHHHHHHHHHHHHHHHHhcCceEecCCccEEEEEECCC-CHHHHHHHHHHhCCEEE
Confidence            677777777766665333    5567789999999999999999999999999999999987 67788999999999999


Q ss_pred             eCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          237 VPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       237 ~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .||+.|+.  ++++|++++.+++++++++++|+++|
T Consensus       340 ~pG~~F~~--~g~iRis~~~~~e~l~~al~rl~~~l  373 (375)
T d1o4sa_         340 VPGSAFLK--PGFVRLSFATSIERLTEALDRIEDFL  373 (375)
T ss_dssp             EEGGGGTC--TTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             EEccccCC--CCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence            99999975  67999999889999999999999874

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=100.00  E-value=2e-41  Score=293.29  Aligned_cols=261  Identities=20%  Similarity=0.308  Sum_probs=220.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCC--------cccCCCC-----CCCceEEEEecCCCccccCCCHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNN--------FFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLE   68 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~--------~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~   68 (272)
                      |.|++..|++. |...+...| +++.+++++++.        |.++.++     .++++++++++||||||.+++.++++
T Consensus       115 d~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~  194 (418)
T d2r5ea1         115 DEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELE  194 (418)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSSCEEGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred             cceeccccccchhhHHHHHcCCeEEEEEecccccccchhhhhhhhhHHHHhhhhhccccceecCCcCccccccccHHHHH
Confidence            56777777665 888888888 999999886643        3333222     37889999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHH
Q 036024           69 QLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDF  147 (272)
Q Consensus        69 ~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~  147 (272)
                      +|+++|+++++++|+||+|.++.+++. ..++..+.+..+++++++|+||.+++||+|+||+++++++        ++.+
T Consensus       195 ~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~--------i~~~  266 (418)
T d2r5ea1         195 VVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEAL--------LKNL  266 (418)
T ss_dssp             HHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEESCHHH--------HHHH
T ss_pred             HHhhhhhcCCeeeecccchhhhccCCCccccccccccccceeeeeecCCccccCCCcccccccccchh--------hhhh
Confidence            999999999999999999999888764 4556666666789999999999999999999999999988        6777


Q ss_pred             HhhhhhccCCcchHHHHHHHHhccc------ccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC---
Q 036024          148 NRIICTCFNGASNIAQAGGLACLSS------EGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG---  218 (272)
Q Consensus       148 ~~~~~~~~~~~~~~~~~a~~~~l~~------~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~---  218 (272)
                      .+.......+.+.+.|.++...+..      ...++++++++.++++++.+.+.|++.|+++..|++|+|+|+++++   
T Consensus       267 ~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~P~gg~f~~~~~~~~~~  346 (418)
T d2r5ea1         267 QMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDS  346 (418)
T ss_dssp             HHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHTTCEEEECSBSSEEEEECGGGST
T ss_pred             hhcccccccccccchhhhccccccccccccccchhhHHHHHHHHHHhhhhHHhhHhhcCCcccCCCceeEEEEEcccccc
Confidence            7777766667888888877776652      2236789999999999999999999999999999999999998852   


Q ss_pred             ----------CChHHHHHHHHHhcCeEeeCCCCCCCC-----CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          219 ----------RKSWDVFAEILEKTHITTVPGSGFGPG-----GEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       219 ----------~~~~~~~~~ll~~~gi~v~~g~~~~~~-----~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                                .++.+++..|++++||.+.||+.|+..     +++++|+|++.++|++++++++|++++
T Consensus       347 ~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~iRis~~~~~e~l~~a~~rl~~~l  415 (418)
T d2r5ea1         347 KVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWK  415 (418)
T ss_dssp             TCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             cccchhcccccCHHHHHHHHHHHCCEEEeCchhhCCCCCccCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence                      356788899999999999999999754     358999999889999999999999864

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=100.00  E-value=7.1e-41  Score=290.51  Aligned_cols=260  Identities=20%  Similarity=0.262  Sum_probs=210.8

Q ss_pred             cccccccCccc-chHHhcc-cc-eeEEeecCCCCCcccCCCC-----------CCCceEEEEecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGK-YC-NIEYLECGPGNNFFPDLKG-----------TSRTDIIFFCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~-~g-~~~~~~~~~~~~~~~dl~~-----------~~~~~~i~~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..|++. |...+.. .| ++++++++.+++|.+|++.           .+++++++++|||||||.+++.+++++
T Consensus       133 d~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~  212 (428)
T d1iaya_         133 DAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKS  212 (428)
T ss_dssp             CEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             CEEEEccCCchHHHHHHHHhcCCeEEEeecccccccccccccccchhhhhhccCCCceEEEEccCCCcccccccccccch
Confidence            67888888776 6666654 47 9999999988889888542           367899999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccCCccccCCC-CCCccccC-------CCCCceEEEecCccccCCCccceeEEEecccccccCCc
Q 036024           70 LVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIP-------GAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF  141 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~-------~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~  141 (272)
                      |+++|++|+++||+||+|.++.+++. ..++.++.       ...+++++++|+||.++++|+|+||++++++.+     
T Consensus       213 i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~GlRiG~~~~~~~~l-----  287 (428)
T d1iaya_         213 VLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDV-----  287 (428)
T ss_dssp             HHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHH-----
T ss_pred             hheeeccCcEEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCcccCCCcccccccccccch-----
Confidence            99999999999999999999988764 33443321       234788999999999999999999999977662     


Q ss_pred             chHHHHHhhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC
Q 036024          142 PVINDFNRIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR  219 (272)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~  219 (272)
                        .+.+.....  ....+...+.++.+.+.....  +++++.++.++++++.+.+.|+..|+++..+++|+|+|++++..
T Consensus       288 --~~~~~~~~~--~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~l~~r~~~~~~~L~~~gi~~~~p~gg~f~w~~l~~~  363 (428)
T d1iaya_         288 --VNCARKMSS--FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPL  363 (428)
T ss_dssp             --HHHHHHHHT--TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSSSEEEEECGGG
T ss_pred             --hhhhhhhhc--ccccccccccchhhhhhhhccccccccccccccchhHHHHHHHHHhCCCEEecCCcceEEEEECccc
Confidence              333333322  223666777766666664433  67888999999999999999999999999999999999999621


Q ss_pred             -------ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          220 -------KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       220 -------~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                             ++.+++.+|++++||.+.||+.|+..+++++|++++. ++++++++++||+++|
T Consensus       364 ~~~~~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~~Ris~a~~~~~~l~~al~Rl~~~l  424 (428)
T d1iaya_         364 LRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFV  424 (428)
T ss_dssp             CSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             cccCCCCCHHHHHHHHHHhCCEEEEcchhcCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence                   2346788899999999999999998889999999864 6778999999999874

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=100.00  E-value=1.3e-40  Score=289.15  Aligned_cols=260  Identities=20%  Similarity=0.269  Sum_probs=211.1

Q ss_pred             cccccccCccc-chHHhcc-cc-eeEEeecCCCCCcccCCCC-----------CCCceEEEEecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGK-YC-NIEYLECGPGNNFFPDLKG-----------TSRTDIIFFCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~-~g-~~~~~~~~~~~~~~~dl~~-----------~~~~~~i~~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..|++. |...+.. .| ++++++++.+++|.+|.+.           ..++++++++|||||||.+++.+++++
T Consensus       134 d~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~  213 (431)
T d1m7ya_         134 EAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYL  213 (431)
T ss_dssp             CEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             CEEEEeCCCchhHHHHHHHhcCceeccccccchhcccccHHHhhhhhhhhhhccCcceEEEecCcccccccccccccccc
Confidence            67888888775 6666654 56 9999999988889888443           257889999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccCCccccCCC-CCCcccc---------CCCCCceEEEecCccccCCCccceeEEEecccccccC
Q 036024           70 LVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEI---------PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS  139 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~---------~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~  139 (272)
                      |+++|+++++++|+||+|.++.+++. ..++..+         ....+++++++|+||.+|++|+|+||++++++.+   
T Consensus       214 i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~~~~i---  290 (431)
T d1m7ya_         214 LLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMV---  290 (431)
T ss_dssp             HHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEESCHHH---
T ss_pred             ccccccccCcceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEecCcccccCCCCccceeccchhhh---
Confidence            99999999999999999999888754 2333322         2234689999999999999999999999998873   


Q ss_pred             CcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH--HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC
Q 036024          140 GFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL--EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP  217 (272)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~  217 (272)
                           .......... ...+...+.++.+.+.....  ++.++.++.++++++.+.+.|++.|+++..+++|+|+|++++
T Consensus       291 -----~~~~~~~~~~-~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~~~p~gg~f~w~~l~  364 (431)
T d1m7ya_         291 -----VAAATKMSSF-GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMR  364 (431)
T ss_dssp             -----HHHHHHHGGG-SCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCCCSSSEEEEECG
T ss_pred             -----HHHHHHHhcc-ccccccccchhhhhhccchhhhhhhhhhhhhhhhhhhhhhhhhhcCCcEEecCCceeEEEEECc
Confidence                 3333333333 33666667667766654333  688999999999999999999999999999999999999996


Q ss_pred             C-------CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          218 G-------RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       218 ~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      .       .++.+++.++++++||.+.||+.|+..+++++|++++. +++++++++++|++++
T Consensus       365 ~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~~~~Ri~~a~~~e~~l~~al~rL~~~l  427 (431)
T d1m7ya_         365 HLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFV  427 (431)
T ss_dssp             GGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             cccccCcccCHHHHHHHHHHHCCEEEEeccccCCCCCCEEEEEeCcCCHHHHHHHHHHHHHHH
Confidence            3       13456788999999999999999998888999999865 6778999999999864

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=2e-40  Score=286.40  Aligned_cols=264  Identities=19%  Similarity=0.303  Sum_probs=214.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. |...+...| +++++|++++++|.++++.     .+++++++++|||||||.+++.+++++|+++|++
T Consensus       126 d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~  205 (412)
T d1bw0a_         126 DYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEE  205 (412)
T ss_dssp             CEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             cceeeeeccchhhhhhhhccCccccccccccccccchhhHHHHhhhhccccccccccccccccccchhhhcccccccccc
Confidence            66888888777 888889999 9999999988888888543     4788999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCCCC-Ccccc---CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024           77 NGSIIIFDSAYAAYVTDGCPR-SIYEI---PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~-~~~~~---~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  152 (272)
                      ++++||+||+|.++.+++... +....   .....++++++|+||.++++|+|+||++++++....  ...+........
T Consensus       206 ~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~~~~~~--~~~~~~~~~~~~  283 (412)
T d1bw0a_         206 LRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNG--PSFLEGLKRVGM  283 (412)
T ss_dssp             HTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSC--HHHHHHHHHHHH
T ss_pred             CCeeeechhhHHHhccCCCCCccccccccccccccccccccccCccCccCCCCcccccccchhhcc--hhhhhhhccccc
Confidence            999999999999998886432 22211   122356799999999999999999999998766321  111222222222


Q ss_pred             hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecC------CCChHHHH
Q 036024          153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFP------GRKSWDVF  225 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~------~~~~~~~~  225 (272)
                      . ..+++...|.++...+.....+++.+.++.++++++.+.+.|.+. |+.+..|++|+|+|++++      ..++.+++
T Consensus       284 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~g~~~~~p~gg~~l~~~~~~~~~~~~~~~~~~~  362 (412)
T d1bw0a_         284 L-VCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFF  362 (412)
T ss_dssp             H-HTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGGBSSCCSHHHHH
T ss_pred             c-ccCCchhhhhhcccccccccccccccccchhHHHHHHHHHHHHHhcCceecCCCCceEEEEeCChhhcCCCCCHHHHH
Confidence            2 333566666666666665667889999999999999999999876 999999999999999886      13677899


Q ss_pred             HHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          226 AEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       226 ~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+|++++||.+.||+.|+.  ++++|+|++.+++++++++++|++++
T Consensus       363 ~~ll~~~gV~v~PG~~Fg~--~g~iRis~~~~~e~l~eal~Rl~~~l  407 (412)
T d1bw0a_         363 EKLLEEENVQVLPGTIFHA--PGFTRLTTTRPVEVYREAVERIKAFC  407 (412)
T ss_dssp             HHHHHHHCEECEEGGGGTC--TTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCEEEEeccccCC--CCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence            9999999999999999974  68999999889999999999998864

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-41  Score=289.45  Aligned_cols=260  Identities=20%  Similarity=0.280  Sum_probs=220.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCC----------CCcccCCCC-----CCCceEEEEecCCCccccCCCHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPG----------NNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQ   66 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~----------~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~   66 (272)
                      |.|++..|++. |...+...| +.+.++..+.          .++.+|.++     .++++++++++||||||.+++.++
T Consensus       113 ~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~~~~p~NPtG~~~s~~~  192 (418)
T d1w7la_         113 DEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREE  192 (418)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred             ceeeccccccchhHHHHHHcCCEeeccccccccccccccccccCcccchhhhhccccccccceeccCcCCcccccccHHH
Confidence            56677766666 888888888 8888887642          345555322     478889999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHH
Q 036024           67 LEQLVEFARNNGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIN  145 (272)
Q Consensus        67 l~~l~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~  145 (272)
                      +++|+++|+++++++|+||+|.++.+++. ..++..+.+..++++++.|+||.+++||+|+||+++++++        +.
T Consensus       193 ~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG~RvG~~v~~~~~--------~~  264 (418)
T d1w7la_         193 LELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHI--------MK  264 (418)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEECCHHH--------HH
T ss_pred             HHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHccccccccceecccCccccCCCCcccccccchhh--------hh
Confidence            99999999999999999999999988764 4566777666789999999999999999999999999988        77


Q ss_pred             HHHhhhhhccCCcchHHHHHHHHhccccc------HHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecC--
Q 036024          146 DFNRIICTCFNGASNIAQAGGLACLSSEG------LEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFP--  217 (272)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~--  217 (272)
                      .+.........+++.+.|.++..++....      .++....++.++++++.+.+.|+++|+++..|++|+|+|++++  
T Consensus       265 ~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~P~gg~f~~~~~~~~  344 (418)
T d1w7la_         265 HLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDISDF  344 (418)
T ss_dssp             HHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSBSSEEEEECHHH
T ss_pred             hhccccccccccccchhhHHHHHHhhhccccccccccccccchhhhhhhhhhhhhhhhhcCCcccCCCceeEEEEECccc
Confidence            78888877777789999998888876322      3678889999999999999999999999999999999999874  


Q ss_pred             ------------CCChHHHHHHHHHhcCeEeeCCCCCCC-----CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          218 ------------GRKSWDVFAEILEKTHITTVPGSGFGP-----GGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       218 ------------~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                                  ...+.+++.+|++++||.+.||+.|+.     .+.+++|+|++.+++++++++++|+++
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis~~~~~~~l~~a~~rl~~~  415 (418)
T d1w7la_         345 KRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKW  415 (418)
T ss_dssp             HHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHH
T ss_pred             ccccchhccccccccHHHHHHHHHHHCCEEEEcchhhcCCCccCCCCCEEEEEEcCCHHHHHHHHHHHHHH
Confidence                        123577889999999999999999973     357899999988999999999999875

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=100.00  E-value=1.3e-40  Score=286.00  Aligned_cols=262  Identities=16%  Similarity=0.171  Sum_probs=209.1

Q ss_pred             ccccccc-CcccchHHhcccc-eeEEeecCC-CCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVG-QAGDLEDEVGKYC-NIEYLECGP-GNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~-~~~~~~~~~~~~g-~~~~~~~~~-~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++.. +++.|.......| +.+.++... +.+|.+|.+.      .+++++++++|||||||.+++.+++++|+++|
T Consensus       114 d~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~P~NPTG~v~s~~~l~~l~~~a  193 (394)
T d1c7na_         114 DGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIV  193 (394)
T ss_dssp             CEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHH
T ss_pred             cccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhccccceEEEecccccccceeccHHHhhhhhccc
Confidence            5676665 4555888888888 888887763 4456666332      36799999999999999999999999999999


Q ss_pred             HHcCCEEEEcccCCccccCCCCCCc-ccc-CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPRSI-YEI-PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~~~-~~~-~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  152 (272)
                      ++++++||+||+|.++.+++...+. ... ....++++++.|+||.+|++|+|+||+++++..+       .+.+.....
T Consensus       194 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~~~~i-------~~~~~~~~~  266 (394)
T d1c7na_         194 LKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDI-------RERFTKSRD  266 (394)
T ss_dssp             HHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHH-------HHHHHHHHH
T ss_pred             cccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccccccChhh-------hhhhhhhhh
Confidence            9999999999999999987654332 222 2234678999999999999999999999988773       455555555


Q ss_pred             hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCCCceEEEeecC--CCChHHHHHHH
Q 036024          153 TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPYVWAHFP--GRKSWDVFAEI  228 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~i~l~--~~~~~~~~~~l  228 (272)
                      .....+....+.++.........++.++.++.++++++.+.+.++..  ++.+..|++++|+|++++  +.++.+++.+|
T Consensus       267 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~L  346 (394)
T d1c7na_         267 ATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKAMEEFM  346 (394)
T ss_dssp             HTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHHHHHHH
T ss_pred             hccccccccccchhhhhhhcchhhhhcccccccchhhhhhhhhhhccccceeecCCCceeEEEEECCCCCCCHHHHHHHH
Confidence            44444444444444444444556788899999999999999998865  778888889999999997  45788889999


Q ss_pred             HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++++||.+.||+.|++.+++++|+|++.+++++++++++|+++|
T Consensus       347 l~~~gV~v~pG~~Fg~~~~~~iRis~~~~~e~i~eal~rl~~~l  390 (394)
T d1c7na_         347 IHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKAL  390 (394)
T ss_dssp             HHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             HHhCCEEEEcchhhCCCCCCEEEEEEeCCHHHHHHHHHHHHHHH
Confidence            99999999999999988889999999888999999999998864

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-39  Score=279.30  Aligned_cols=258  Identities=19%  Similarity=0.282  Sum_probs=220.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++..|++. +...++..| .+++++.+.+ ++.+|+++     .+++++++++|||||||.+++.+++++|+++|++
T Consensus       112 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~i~l~~P~NPtG~v~~~~~~~~l~~~~~~  190 (382)
T d1u08a_         112 DEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAG  190 (382)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTT
T ss_pred             ceEEEecccccchhhhhhhccccceecccccc-cccCCHHHHhhhhccCccEEEECCCCcccccccccccchhhhhhhcc
Confidence            55677766666 778888888 8888888755 77777444     3789999999999999999999999999999999


Q ss_pred             cCCEEEEcccCCccccCCC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           77 NGSIIIFDSAYAAYVTDGC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +++.++.|+.|..+.+.+. ...........+++|++.|+||.+++||+|+||+++++++        +..+........
T Consensus       191 ~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~~~~--------~~~~~~~~~~~~  262 (382)
T d1u08a_         191 HEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPI--------SAEIRKVHQYLT  262 (382)
T ss_dssp             SCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHH--------HHHHHHHHHHHT
T ss_pred             ccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhccchh--------HHHHHhhhcccc
Confidence            9999999999998777653 2333333344578999999999999999999999999888        677777777777


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCC---CChHHHHHHHHHhc
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPG---RKSWDVFAEILEKT  232 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~---~~~~~~~~~ll~~~  232 (272)
                      .+++.+.|.++..++... .++.+++++.++++++.+.+.+...|+.+..|++|+|+|++++.   .++.+++.+|++++
T Consensus       263 ~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~p~gg~~~~~~~~~~~~~d~~e~~~~ll~e~  341 (382)
T d1u08a_         263 FSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEH  341 (382)
T ss_dssp             SSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHS
T ss_pred             cccccccccccccccccc-hHHHHHHHHHHHhhhhhhhhhhccCCcEEecCCceEEEEEecCCCCCCCHHHHHHHHHHHC
Confidence            779999999999999844 47889999999999999999999889999999999999999983   56788999999999


Q ss_pred             CeEeeCCCCCCC--CCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          233 HITTVPGSGFGP--GGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       233 gi~v~~g~~~~~--~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                      ||.+.||+.|+.  .+.+++|+|++.++|++++++++|+++
T Consensus       342 gV~v~PG~~F~~~~~~~~~~Ris~~~~~e~l~~al~RL~~l  382 (382)
T d1u08a_         342 GVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL  382 (382)
T ss_dssp             CEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTTC
T ss_pred             CEEEEcchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHhCC
Confidence            999999999974  356799999988999999999999874

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.7e-38  Score=269.55  Aligned_cols=258  Identities=21%  Similarity=0.240  Sum_probs=210.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC--CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD--LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN   77 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d--l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~   77 (272)
                      |.|++..|++. |...+...| ..+.++.+.++.+..+  +..  .+++++++++|||||||.+++.+++++|+++|+++
T Consensus       112 d~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~  191 (389)
T d2gb3a1         112 DEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERH  191 (389)
T ss_dssp             CEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred             CeEEEeCCCCccccccccccCccccccccccccccchhhhhhhhcccCccEEEeCCCCccccccchHHHHHHHHhhcccC
Confidence            56777777776 888888888 9999998876444433  111  37889999999999999999999999999999999


Q ss_pred             CCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCC
Q 036024           78 GSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNG  157 (272)
Q Consensus        78 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (272)
                      +++||+||+|.++.+++...+....  ..++++++.|+||.+++||+|+||++++++.+       ...... .......
T Consensus       192 ~~~iI~De~y~~~~~~~~~~~~~~~--~~~~~~v~~s~sK~~~~~GlRiG~~~~~~~~i-------~~~~~~-~~~~~~~  261 (389)
T d2gb3a1         192 GLFLIVDEVYSEIVFRGEFASALSI--ESDKVVVIDSVSKKFSACGARVGCLITRNEEL-------ISHAMK-LAQGRLA  261 (389)
T ss_dssp             TCEEEEECTTTTCBCSSCCCCGGGS--CCTTEEEEEESTTTTTCGGGCCEEEECSCHHH-------HHHHHH-HHHHSCC
T ss_pred             CEEEEEecccccccccccccccccc--ccccccccccccccccCcccceeeeeccchhH-------HHHHhh-hhhcccc
Confidence            9999999999999888765544433  45788999999999999999999999988762       333333 3344445


Q ss_pred             cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEecCCCceEEEeecCCCChHHHHHHHHHh-----
Q 036024          158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI-KVYGGINAPYVWAHFPGRKSWDVFAEILEK-----  231 (272)
Q Consensus       158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~-----  231 (272)
                      ++.+.+.++..++. ....++++.++.++++++.+.+.|+++|+ .+..|++|+|+|++++..++.++...|+++     
T Consensus       262 ~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~~g~~~~~~lp~~~~~~~~~~ll~e~~l~~  340 (389)
T d2gb3a1         262 PPLLEQIGSVGLLN-LDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDG  340 (389)
T ss_dssp             CCHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBTT
T ss_pred             cccccccccccccc-ccchhcccccccccccchhhhhhhhhhccccccCCCceEEEEEeCCCCCHHHHHHHHHHhhhhhh
Confidence            77778887777776 44678899999999999999999999965 466778999999999977888888888876     


Q ss_pred             cCeEeeCCCCCCCC---CCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPG---GEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~---~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .||.+.||+.|+..   +.+++|++++.+++++++++++|+++|
T Consensus       341 ~~v~v~pg~~f~~~~~~~~~~iRis~~~~~~~l~~a~~~L~~~l  384 (389)
T d2gb3a1         341 ETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGL  384 (389)
T ss_dssp             EEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCcccccCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHH
Confidence            47889999988742   368999999889999999999998764

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=7.9e-38  Score=265.01  Aligned_cols=250  Identities=17%  Similarity=0.226  Sum_probs=202.4

Q ss_pred             cccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      +++..|.+. |.......+ +++.+|++.+++|.++.+.    .+++++++++|||||||.+++.+++++|+++|+++++
T Consensus        99 ~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~l~nP~NPtG~~~~~e~l~~i~~~a~~~~~  178 (355)
T d1lc5a_          99 AMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNI  178 (355)
T ss_dssp             EEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred             ccccCCccceeccccccccccceeeeeeccCCccceeeeeeccccccceeeeecccCcccccchhhhhhhhhhhcccccc
Confidence            344445444 777777777 9999999988788777222    4789999999999999999999999999999999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcc
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS  159 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (272)
                      ++|+||+|.++.+.+...  .......+++++++|+||.+|+||+|+||++++++.+       .+.+....  ...+.+
T Consensus       179 ~li~De~y~~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~~~~-------~~~~~~~~--~~~~~~  247 (355)
T d1lc5a_         179 NLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAA-------MARMRRQQ--MPWSVN  247 (355)
T ss_dssp             EEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHH-------HHHHHHHS--CTTCSC
T ss_pred             ccccccceeeeeeecccc--cccccccccceeecccccccccccccccceeccchhh-------hHHHHhhc--CCcccc
Confidence            999999999887665432  2333456789999999999999999999999988763       34444332  334588


Q ss_pred             hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeC
Q 036024          160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVP  238 (272)
Q Consensus       160 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~  238 (272)
                      .+++.++.+++.+  ..+..+.++.++++++++.+.|.++ ++++. |.+++|+|+.++. ++.++...|.++ ||.++|
T Consensus       248 ~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-p~~~~f~~~~~~~-~~~~~~~~L~~~-gv~vr~  322 (355)
T d1lc5a_         248 ALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRANYLLLRCER-EDIDLQRRLLTQ-RILIRS  322 (355)
T ss_dssp             HHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSSEEEEEESC-TTCCHHHHHHTT-TEECEE
T ss_pred             ccccccccccccc--cchhHHHHHHHHHHHHHHHHHHhhcCCcEEC-CCCCEEEEEECCC-CHHHHHHHHHHC-CcEEEe
Confidence            8899988888874  4566888899999999999999998 66665 4688999999985 445677777655 999999


Q ss_pred             CCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          239 GSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       239 g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      |+.|+..+++++|||+. +++|+++++++|+++|
T Consensus       323 ~~~f~~~~~~~iRis~~-~~~e~~~li~aL~~il  355 (355)
T d1lc5a_         323 CANYPGLDSRYYRVAIR-SAAQNERLLAALRNVL  355 (355)
T ss_dssp             CTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCEEEEEeC-CHHHHHHHHHHHHHhC
Confidence            99998777899999984 7899999999999986

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-38  Score=270.83  Aligned_cols=260  Identities=17%  Similarity=0.244  Sum_probs=205.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCC-CCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGP-GNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~-~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      |.|++..|++. |...+...| ++++++.+. ++++.+|++.      .+++++++++|||||||.+++.+++++|+++|
T Consensus        83 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~~~~i~~~~  162 (361)
T d1d2fa_          83 EGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLC  162 (361)
T ss_dssp             CEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHH
T ss_pred             cccccccccccchhHHHHhhcceEEeecccccccccccccccchhhcccCCceeEEecccccccccccchhhhhhhhhhh
Confidence            67888888776 888888888 888888774 3467777554      37899999999999999999999999999999


Q ss_pred             HHcCCEEEEcccCCccccCCCCC-CccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh
Q 036024           75 RNNGSIIIFDSAYAAYVTDGCPR-SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT  153 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (272)
                      +++++++|+||+|.++.+++... ++...  ..++++++.|+||.++++|+|+||++++.....      ...+......
T Consensus       163 ~~~~~~lI~De~y~~~~~~~~~~~~~~~~--~~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~~~------~~~~~~~~~~  234 (361)
T d1d2fa_         163 ERHGVRVISDEIHMDMVWGEQPHIPWSNV--ARGDWALLTSGSKSFNIPALTGAYGIIENSSSR------DAYLSALKGR  234 (361)
T ss_dssp             HHTTCEEEEECTTTTCBCSSSCCCCGGGT--CCSSEEEEECSHHHHTCGGGCCEEEEECSHHHH------HHHHHHHHTT
T ss_pred             hhhheeeeecccccccccccccccccccc--cccccccccccccccccccccceeeecchhHHH------HHHhhhcccc
Confidence            99999999999999998876433 33333  456789999999999999999999988765521      2222222222


Q ss_pred             c-cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEecCCCceEEEeecC--CCChHHHHHHH
Q 036024          154 C-FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL--GIKVYGGINAPYVWAHFP--GRKSWDVFAEI  228 (272)
Q Consensus       154 ~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~i~l~--~~~~~~~~~~l  228 (272)
                      . ..+++...+.++..... ....+.++.+..++++++.+.+.+.+.  ++.+..|++|+|+|++++  +.++.+++.+|
T Consensus       235 ~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~L  313 (361)
T d1d2fa_         235 DGLSSPSVLALTAHIAAYQ-QGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKAL  313 (361)
T ss_dssp             SCCCSCCHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHH
T ss_pred             cccccchhhhHHHHHHHhh-ccchhhhcccccchhhHHHHHHHhhhhcccccccccCceeEEEEEccCCCCCHHHHHHHH
Confidence            2 22244444444333333 444677888999999999998888765  788888889999999986  56888999999


Q ss_pred             HHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          229 LEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ++++||.+.||+.|+..+++++|+|+..+++++++++++|++++
T Consensus       314 l~~~gv~v~pG~~F~~~~~~~vRis~~~~~e~l~~al~rl~~~l  357 (361)
T d1d2fa_         314 IEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAI  357 (361)
T ss_dssp             HHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             HHhCCEEEEeccccCCCCCCEEEEEEcCCHHHHHHHHHHHHHHH
Confidence            99999999999999988889999999878899999999998864

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.5e-38  Score=269.37  Aligned_cols=255  Identities=23%  Similarity=0.322  Sum_probs=212.9

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCC-CCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGP-GNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~-~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..|.+. +.......| +++.++++. .+++.+|++.     .+.+++++++|||||||.+++.+++++|+++|+
T Consensus       103 d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~  182 (368)
T d1v2da_         103 DEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLAR  182 (368)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred             ccccccCCcchhhhhHHHhcCCccceeccccccccccCCHHHHHHhhccCceEEEEcCCCCcccccCCHHHHHHHHHHHH
Confidence            56777776666 778888888 888888763 3357777433     378899999999999999999999999999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      +|++++|+||+|..+............  ..++.+++.|+||.++++|+|+||++++++.        ++.+........
T Consensus       183 ~~~i~ii~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~~--------~~~~~~~~~~~~  252 (368)
T d1v2da_         183 AHDLFLISDEVYDELYYGERPRRLREF--APERTFTVGSAGKRLEATGYRVGWIVGPKEF--------MPRLAGMRQWTS  252 (368)
T ss_dssp             HTTCEEEEECTTTTCBSSSCCCCHHHH--CTTTEEEEEEHHHHTTCGGGCCEEEECCTTT--------HHHHHHHHHHHT
T ss_pred             HcCCeeeechhhhhhcccccccccccc--cccccceeecccccccccccccccccccccc--------cchhhhhhhccc
Confidence            999999999999877666543333222  3456788999999999999999999999988        777888777777


Q ss_pred             CCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCe
Q 036024          156 NGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHI  234 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi  234 (272)
                      .+++.+.|.++..++..... +++++.++.++++++.+.+.|+++|+++..|++++|+|+++++.+..    ++++++||
T Consensus       253 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~p~g~~~~~~~l~~~~~~----~ll~~~gI  328 (368)
T d1v2da_         253 FSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGWDAF----RLVEEARV  328 (368)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTCCHH----HHHHHTCE
T ss_pred             cccccccccccccccccccchhhHHHHHHHHHHhhhhhhhhHHhcCcEEecCCceeEEEEeCCccHHH----HHHHhCCE
Confidence            77999999988888874433 68899999999999999999999999999999999999999975543    46778899


Q ss_pred             EeeCCCCCCC--CCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          235 TTVPGSGFGP--GGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       235 ~v~~g~~~~~--~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      .+.||+.|+.  .+++++|+|++.++|++++++++|+++|
T Consensus       329 ~v~pg~~F~~~~~~~~~iRis~~~~~e~i~~ai~rL~~~l  368 (368)
T d1v2da_         329 ALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVV  368 (368)
T ss_dssp             ECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred             EEEechhhCCCCCCCCEEEEEecCCHHHHHHHHHHHHHhC
Confidence            9999999974  3578999999889999999999999986

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=100.00  E-value=9.8e-38  Score=268.76  Aligned_cols=259  Identities=18%  Similarity=0.225  Sum_probs=207.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCC--------C-CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLK--------G-TSRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~--------~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..|++. |...+...| +++.++.+.++.......        . .+.+.++++++||||||.+++.+++++|++
T Consensus       119 d~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~  198 (403)
T d1wsta1         119 DPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLE  198 (403)
T ss_dssp             CEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred             CccccCCCcchhhhHHHhhccccceeEeecccCCccccccccchhhhhccccccccccccccCCCCCccCCHHHHHHHHH
Confidence            56777777666 888888888 999999987644333221        1 244556677799999999999999999999


Q ss_pred             HHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh
Q 036024           73 FARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC  152 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  152 (272)
                      +|++|+++||+||+|.++.+++.+.+........+++++++|+||.++ +|+|+||+++++++        ++.+.....
T Consensus       199 ~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~G~RiG~~i~~~~~--------i~~~~~~~~  269 (403)
T d1wsta1         199 LANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILA-PGFRIGWVAAHPHL--------IRKMEIAKQ  269 (403)
T ss_dssp             HHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEESTTTTC-GGGCCEEEEECHHH--------HHHHHHHHH
T ss_pred             HHHhcCceeccccchhheecCCCCCCcccccCCCCcEEEEccccceec-CcccccccccchHH--------HHHHHHHHh
Confidence            999999999999999999988765433333335678999999999996 99999999999988        666776666


Q ss_pred             hccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC---CCeEecCCCceEEEeecCCC-ChHHHHHH
Q 036024          153 TCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL---GIKVYGGINAPYVWAHFPGR-KSWDVFAE  227 (272)
Q Consensus       153 ~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~i~l~~~-~~~~~~~~  227 (272)
                      ......+...|.+..+++..... .++++.++.++++++.+.+.|.+.   |+.+..|.+|+|+|+.++.. +...+...
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~p~gg~~~~~~~~~~~~~~~~~~~  349 (403)
T d1wsta1         270 SIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPEGIDTKLMMER  349 (403)
T ss_dssp             HHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECCTTCCTTTTHHH
T ss_pred             hhccccccchhhhHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhccCCeEEeCCCceeEEEEECCCCCCHHHHHHH
Confidence            66666888888877777764443 678899999999999999999875   78888899999999999943 44455555


Q ss_pred             HHHhcCeEeeCCCCCCC--CCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          228 ILEKTHITTVPGSGFGP--GGEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~--~~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                      + .++||.+.||+.|+.  .+++++|++++ .+++++++++++|+++|
T Consensus       350 l-~~~gV~v~pg~~f~~~~~~~~~iRi~~~~~~~~~l~~al~rl~~~l  396 (403)
T d1wsta1         350 A-VAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETI  396 (403)
T ss_dssp             H-HHTTEECEEGGGGSTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             H-HHCCEEEEechhhcCCCCCCCEEEEEecCCCHHHHHHHHHHHHHHH
Confidence            5 455999999999974  34789999986 48889999999998764

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.2e-37  Score=269.58  Aligned_cols=258  Identities=20%  Similarity=0.309  Sum_probs=206.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CC----------CCCCceEEE-EecCCCccccCCCHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LK----------GTSRTDIIF-FCSPNNPTGHAATQNQLEQ   69 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~----------~~~~~~~i~-~~~p~nptG~~~~~~~l~~   69 (272)
                      |.|++..|++. |...++..| +++.+|.+++ ++.+| ++          ...+++.++ +++||||||.+++.+++++
T Consensus       129 d~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~~~~  207 (420)
T d1vp4a_         129 SYCVLDDPAYLGAINAFRQYLANFVVVPLEDD-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKA  207 (420)
T ss_dssp             CEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHH
T ss_pred             cccccccccccchhHHHHHHhhhccccccccc-ccccchhhhhhhhhHHHhhccccceeeEecCCCCccchhhhhhhhhh
Confidence            56788787777 888888899 9999999866 55443 11          124455555 5599999999999999999


Q ss_pred             HHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024           70 LVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR  149 (272)
Q Consensus        70 l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~  149 (272)
                      |+++|+++++++|+||+|.++.+++...........++++++++|+||.++ +|+|+||+++++++        ++.+..
T Consensus       208 i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~s~sk~~~-~G~RiG~~~~~~~~--------i~~l~~  278 (420)
T d1vp4a_         208 LVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSKEF--------IRKIVQ  278 (420)
T ss_dssp             HHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCHHH--------HHHHHH
T ss_pred             hhhhhhcccccccccchhhhccccCcccccccccccccceeEEeccccccc-cccccccccccchh--------hhhhhh
Confidence            999999999999999999999887654332222234678899999999886 99999999999988        677777


Q ss_pred             hhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhC-----CCeEecCCCceEEEeecCC-CChH
Q 036024          150 IICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASL-----GIKVYGGINAPYVWAHFPG-RKSW  222 (272)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~~~~~~~~~i~l~~-~~~~  222 (272)
                      ........++...|.++..++..... +++++.++.++++++.+.+.|.+.     |+++..|++|+|+|++++. .+..
T Consensus       279 ~~~~~~~~~~~~~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~g~~~~~p~gg~f~~~~~~~~~d~~  358 (420)
T d1vp4a_         279 AKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFDTW  358 (420)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCCTT
T ss_pred             hhhhccccCchhhhhhhhhhcccccccccchhHHHHhhhhcccchhhhhhhhccCCCcEEecCCceEEEEEECCCCCCHH
Confidence            77766667888999888888875554 677888889999999988888764     7899999999999999984 4555


Q ss_pred             HHHHHHHHhcCeEeeCCCCCCCC--CCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          223 DVFAEILEKTHITTVPGSGFGPG--GEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       223 ~~~~~ll~~~gi~v~~g~~~~~~--~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                      ++... ++++||.+.||+.|+..  +.+++|+|++ .+++++++++++|+++|
T Consensus       359 ~~~~~-l~~~gV~v~PG~~F~~~~~~~~~iRls~~~~~~e~l~~a~~rL~~~l  410 (420)
T d1vp4a_         359 EMFEY-AKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVV  410 (420)
T ss_dssp             TTHHH-HHHHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHCCeEEEechhhCCCCCCCCEEEEEeCcCCHHHHHHHHHHHHHHH
Confidence            65554 45669999999999854  3679999986 47889999999998764

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=3e-36  Score=259.26  Aligned_cols=253  Identities=14%  Similarity=0.120  Sum_probs=201.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC--------CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG--------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|++. |...+...| +++++|+.+++++.+|++.        .++++++++++||||||.+++.+++++|+++
T Consensus       124 d~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~  203 (401)
T d7aata_         124 RDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASV  203 (401)
T ss_dssp             CEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHH
T ss_pred             ceEEEecCCCcchhhHHHHcCCeEEEEeccccccccccHHHHHHHHhcCCCceEEEEecCCCCCccccCCHHHHHHHHHH
Confidence            67889888887 888999999 9999999888788877432        3678899999999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCCCc---cccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhh
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPRSI---YEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI  150 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~  150 (272)
                      |++|++++|+||+|.++.+++.....   .......++++++.|+||.++++|+|+||++++...... ..+....+...
T Consensus       204 a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~  282 (401)
T d7aata_         204 VKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEE-AKRVESQLKIL  282 (401)
T ss_dssp             HHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHH-HHHHHHHHHHH
T ss_pred             HhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhcccceeEeccccceeeccccceeecchHHHHH-HHHHHHHHHHH
Confidence            99999999999999999987642211   122233456789999999999999999999999887321 11112222223


Q ss_pred             hhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCCCh
Q 036024          151 ICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGRKS  221 (272)
Q Consensus       151 ~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~~~  221 (272)
                      .......++...|.++...+.+..     .++.++++++++++++.+.+.|++++    +.+..+++|+|+|+.++    
T Consensus       283 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls----  358 (401)
T d7aata_         283 IRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK----  358 (401)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC----
T ss_pred             hhccccccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcceECCCCeEEEecCCC----
Confidence            344455578888888888887543     25678888999999999999999874    45667889999998763    


Q ss_pred             HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHh
Q 036024          222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEAL  271 (272)
Q Consensus       222 ~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~  271 (272)
                      .+++.+|++++||++.||+          |||++ .++++++.+.++|.++
T Consensus       359 ~e~~~~L~~e~gV~~~pg~----------Ris~a~~~~~~i~~la~ai~~v  399 (401)
T d7aata_         359 PEQVERLTKEFSIYMTKDG----------RISVAGVASSNVGYLAHAIHQV  399 (401)
T ss_dssp             HHHHHHHHHHHCEECCTTC----------EEEGGGCCTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCEEECCCc----------EEEeccCCHHHHHHHHHHHHHH
Confidence            4678899999999998863          99986 5888899999998876

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=1.2e-35  Score=256.18  Aligned_cols=254  Identities=15%  Similarity=0.141  Sum_probs=201.6

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC--------CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG--------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|++. |...+...| +++++|+..++++.++.+.        .++++++++++||||||.+++.+++++|+++
T Consensus       125 d~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~  204 (412)
T d1yaaa_         125 KLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDA  204 (412)
T ss_dssp             CCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHH
T ss_pred             CEEecccccCchhHHHHHHcCCceecccccccccccccchhhhcccccCCCceEEEEecCCCCCccccCCHHHHHHHHhh
Confidence            78889888887 888888998 9999999888788777433        2456678888999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCC-C-----ccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc---chH
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPR-S-----IYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF---PVI  144 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~-~-----~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~---~~~  144 (272)
                      |+++++++|+||+|.++.+++... +     ........++++++.|+||.++++|+|+||++++++.+.....   ...
T Consensus       205 a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~  284 (412)
T d1yaaa_         205 IASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVT  284 (412)
T ss_dssp             HHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHH
T ss_pred             hccCCEEEeecceeeecccCCcccchhhhhhhhhccccCCCeEEEEecCCccccCcCceEEEEEchhhhhhHHHHHHHHH
Confidence            999999999999999999876421 1     1223345678899999999999999999999999877432111   111


Q ss_pred             HHHHhhhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEee
Q 036024          145 NDFNRIICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAH  215 (272)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~  215 (272)
                      .........+...++..+|.++..++.+..     .++++.+++.++++++.+.+.|+++|    +.+..+++|+|+|+.
T Consensus       285 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~~gG~F~~~~  364 (412)
T d1yaaa_         285 SQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTG  364 (412)
T ss_dssp             HHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECC
T ss_pred             HHHHHHHHHHhcCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeCCCceEEEecC
Confidence            222233345666789999999988888543     25688899999999999999999875    556678899999987


Q ss_pred             cCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHh
Q 036024          216 FPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEAL  271 (272)
Q Consensus       216 l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~  271 (272)
                      ++    .+++.+|++++||++.||+          |||++ .++++++.+.++|+++
T Consensus       365 ls----~e~~~~L~~e~~V~~~~g~----------Ris~~g~~~~~i~~l~~ai~~v  407 (412)
T d1yaaa_         365 LT----PQMVKRLEETHAVYLVASG----------RASIAGLNQGNVEYVAKAIDEV  407 (412)
T ss_dssp             CC----HHHHHHHHHHHCEECCTTS----------EEEGGGCCTTTHHHHHHHHHHH
T ss_pred             cC----HHHHHHHHHhCCEEECCCC----------EEEeccCCHHHHHHHHHHHHHH
Confidence            63    4778999999999998763          99985 5777888888888765

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.6e-34  Score=242.27  Aligned_cols=244  Identities=22%  Similarity=0.291  Sum_probs=191.8

Q ss_pred             cccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      |++..|++. |...+...| +++.++.++  +|.+|++.    .++++++++++||||||.+++.++++.+.+.++ ++.
T Consensus       101 Vl~~~P~y~~~~~~~~~~g~~v~~~~~~~--~~~~d~~~l~~~~~~~~~v~~~~pnNPtG~~~~~~~~~~~~~~~~-~~~  177 (354)
T d1fg7a_         101 ILYCPPTYGMYSVSAETIGVECRTVPTLD--NWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKA  177 (354)
T ss_dssp             EEECSSSCTHHHHHHHHHTCEEEECCCCT--TSCCCHHHHHTSCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTC
T ss_pred             ccccccccccchhhhhccCceeecccccc--ccccchhhhhhcccccceeeccCCCccceeEeeeccccccccccc-ccc
Confidence            555556666 777888888 888888753  56677333    578999999999999999999999998888775 688


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcc
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGAS  159 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (272)
                      ++|+||.|.++..+...   .......+++++++||||.+|++|+|+||++++++.        ++.+.+....  ...+
T Consensus       178 ~~iidd~~~~f~~~~~~---~~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~~~~~--------i~~l~~~~~~--~~~~  244 (354)
T d1fg7a_         178 IVVADEAYIEFCPQASL---AGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV--------INLLMKVIAP--YPLS  244 (354)
T ss_dssp             EEEEECTTGGGSGGGCS---GGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHH--------HHHHHHHSCS--SCSC
T ss_pred             cccccccchhhcccccc---chhhcccccceEEeCCccccCCCccccccccccchh--------hhhhhhhcCc--cchh
Confidence            89999999887755432   223345678899999999999999999999999988        6666654443  3466


Q ss_pred             hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeC
Q 036024          160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVP  238 (272)
Q Consensus       160 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~  238 (272)
                      .+.+.++..++......+.....+++.++++.+.+.+.+++ +....+.+++|+|++++  ++.+++..|+++ ||.+++
T Consensus       245 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p~~~~f~~~~~~--~~~~~~~~L~~~-gIlvr~  321 (354)
T d1fg7a_         245 TPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK--ASSAVFKSLWDQ-GIILRD  321 (354)
T ss_dssp             HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET--THHHHHHHHHHT-TEECEE
T ss_pred             hHHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhCCCcceeCCCCceEEEEeCC--CHHHHHHHHHHC-CcEEec
Confidence            77777777777766666677778889999999999999985 45556678999999997  466777777665 999999


Q ss_pred             CCCCCCCCCCeEEEEccCCHHHHHHHHHHHHH
Q 036024          239 GSGFGPGGEEYIRISGFGHRESILEASRRLEA  270 (272)
Q Consensus       239 g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~  270 (272)
                      ++.|. ..++++|+|+ .+++|+++++++|+.
T Consensus       322 ~~~~~-~~~~~lRisi-gt~ee~~~~l~aLka  351 (354)
T d1fg7a_         322 QNKQP-SLSGCLRITV-GTREESQRVIDALRA  351 (354)
T ss_dssp             CTTST-TCTTEEEEEC-CCHHHHHHHHHHHHT
T ss_pred             CCCCC-CCCCEEEEEe-CCHHHHHHHHHHHhh
Confidence            98774 3468999998 578889999999874

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-36  Score=261.68  Aligned_cols=254  Identities=15%  Similarity=0.143  Sum_probs=201.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC--------CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG--------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|++. |...++..| +++++|+..++++..|.+.        .++++++++++||||||.+++.+++++|+++
T Consensus       122 d~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~  201 (397)
T d3tata_         122 SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEI  201 (397)
T ss_dssp             CCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCHHHHHHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHH
T ss_pred             CcceecccCccccHHHHHHcCCEEEEEecchhhccccchHHHHHHhhhcccccEEEEecCCCCCCCeeCCHHHHHHHHHH
Confidence            77899988888 889999999 9999999988888777332        2567788888999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCCC--CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCP--RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII  151 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~  151 (272)
                      |+++++++|+||+|.++.+++..  .++.......++++++.|+||.++++|+|+||+++++..... ..+.........
T Consensus       202 a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~  280 (397)
T d3tata_         202 LKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEA-AGRVLGQLKATV  280 (397)
T ss_dssp             HHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCEECBCCHHHHTBTTTCCBCCEEECSSTTH-HHHHHHHHHHHT
T ss_pred             HhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCceEEEecCcccccccCccccccccchhHHHH-HHHHHHHHHHHh
Confidence            99999999999999999887532  222233345577899999999999999999999998877421 111122233333


Q ss_pred             hhccCCcchHHHHHHHHhcccccH-----HHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCCChH
Q 036024          152 CTCFNGASNIAQAGGLACLSSEGL-----EAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGRKSW  222 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~~~~  222 (272)
                      ..+...++...|.++...+.+...     ++++.++++++++++.+.+.|...+    +.+..+++|+|+|+.++    .
T Consensus       281 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls----~  356 (397)
T d3tata_         281 RRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS----A  356 (397)
T ss_dssp             TTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCTTSCTTHHHHCCSSBCCCCCC----H
T ss_pred             hcccccccHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEcCCCceEEecCcC----H
Confidence            455556778888888887764332     4567777888888888888887763    66778889999998874    4


Q ss_pred             HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      +++.+|++++||++.||+          |||++. ++++++++.++|+++|
T Consensus       357 e~~~~L~~e~~V~l~~g~----------Ri~~a~~~~~~i~~~~~ai~~v~  397 (397)
T d3tata_         357 AQVDRLREEFGVYLIASG----------RMCVAGLNTANVQRVAKAFAAVM  397 (397)
T ss_dssp             HHHHHHTTTTCEECCSSS----------CCBTTSCCTTTHHHHHHHHHHHC
T ss_pred             HHHHHHHHhCCEEeCCCC----------EEEeccCCHHHHHHHHHHHHHhC
Confidence            678999999999998864          899854 8889999999999875

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.9e-35  Score=251.23  Aligned_cols=254  Identities=14%  Similarity=0.167  Sum_probs=198.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCC--------CCCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLK--------GTSRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~--------~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|++. |...+...| +++++|...+.++..+..        ..++++++++++||||||.+++.+++++|+++
T Consensus       121 d~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~l  200 (396)
T d2q7wa1         121 KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQL  200 (396)
T ss_dssp             CEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHH
T ss_pred             eEEEEecCCCccchHHHHHcCCeeEecccccccccccccchHHHHHHHhccCcEEEEecCCcCCcCeecCHHHHHHHHHH
Confidence            67888888777 888999999 999999998877766632        23677888888999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCC--CccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPR--SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII  151 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~  151 (272)
                      |+++++++|+||+|.++.+++...  ++.......++++++.|+||.++++|+|+||+++++..... ..+.........
T Consensus       201 a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~-~~~~~~~~~~~~  279 (396)
T d2q7wa1         201 SVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSET-VDRAFSQMKAAI  279 (396)
T ss_dssp             HHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHH-HHHHHHHHHHHH
T ss_pred             HhcCCeEEEEeccccccccCCccCchHhhhhhhhcccccccccccccccccCCCccccccchhHHHH-HHHhhhhhhhhh
Confidence            999999999999999998875322  22222223456788999999999999999999999877321 111111112222


Q ss_pred             hhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCCChH
Q 036024          152 CTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGRKSW  222 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~~~~  222 (272)
                      ......++...|.++..++.+..     .+++++++++++++++.+.+.|+++|    +.+..+++|+|.|+.++    .
T Consensus       280 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~l~----~  355 (396)
T d2q7wa1         280 RANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT----K  355 (396)
T ss_dssp             HTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCC----H
T ss_pred             hccccCCCHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcceecCCCeEEEeeCCC----H
Confidence            34455678888888888777432     36788899999999999999999985    44556779999998774    4


Q ss_pred             HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccC-CHHHHHHHHHHHHHhC
Q 036024          223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGFG-HRESILEASRRLEALF  272 (272)
Q Consensus       223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~-~~~~i~~~l~~l~~~l  272 (272)
                      +.+.+|++++||++.||+          |||++. ++++++++.++|+++|
T Consensus       356 e~~~~L~~e~gV~~~~g~----------Ri~~a~l~~~~i~~~~~ai~~v~  396 (396)
T d2q7wa1         356 EQVLRLREEFGVYAVASG----------RVNVAGMTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             HHHHHHHHHHCEECCTTC----------EEEGGGCCTTTHHHHHHHHHHHC
T ss_pred             HHHHHHHHhCCEEECCCC----------EEEecCCCHHHHHHHHHHHHHhC
Confidence            778999999999998764          999864 8889999999999875

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.3e-33  Score=235.40  Aligned_cols=236  Identities=19%  Similarity=0.273  Sum_probs=186.1

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII   81 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v   81 (272)
                      |.|++..|++. |...++..| +++++|++++..+ .+ ...+++++++++|||||||.+++.+++++    +.++++++
T Consensus        97 d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~-~~-~~~~~~~~l~l~nP~NPtG~~~s~~~l~~----~~~~~~~i  170 (334)
T d2f8ja1          97 DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI-PE-VNVGEGDVVFIPNPNNPTGHVFEREEIER----ILKTGAFV  170 (334)
T ss_dssp             SEEEECSSCCHHHHHHHHHHTCCEEECCCCTTSCC-CC-CCCCTTEEEEEESSCTTTCCCCCHHHHHH----HHTTTCEE
T ss_pred             cccccccccccccccchhccCCccccccccccccc-cc-cccccceEEEecccccccceeecHHHhhc----cccceeEE
Confidence            77888887777 888889999 9999999876433 23 23478899999999999999999666544    34689999


Q ss_pred             EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024           82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI  161 (272)
Q Consensus        82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (272)
                      |+||+|.++.+......    ....+++++++|+||+++++|+|+||+++++++        +..+...+..  ...+..
T Consensus       171 i~Dd~~~~~~~~~~~~~----~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~--------i~~l~~~~~~--~~~s~~  236 (334)
T d2f8ja1         171 ALDEAYYEFHGESYVDF----LKKYENLAVIRTFSKAFSLAAQRVGYVVASEKF--------IDAYNRVRLP--FNVSYV  236 (334)
T ss_dssp             EEECTTGGGTCCCCGGG----GGTCSSEEEEEESTTTSSCTTTCEEEEEECHHH--------HHHHHHHSCT--TCSCHH
T ss_pred             eecccchhhcccccccc----cccCceEEEEecCccccchhhhhhhhcccchHH--------HHHHHHhhcc--cccchh
Confidence            99999987654432221    124578999999999999999999999999888        5666655433  347888


Q ss_pred             HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024          162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG  241 (272)
Q Consensus       162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~  241 (272)
                      +|.++.+++..  .++.++.++.++++++.+.+.|+++|+++.++ +|.|+|+.++..+..++...|++ +||.+.++  
T Consensus       237 ~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~g~f~~~~~~~~~~~~~~~~L~~-~GI~vr~~--  310 (334)
T d2f8ja1         237 SQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITDS-RGNFVFVFMEKEEKERLLEHLRT-KNVAVRSF--  310 (334)
T ss_dssp             HHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHHTCEECCC-CSSEEEEECCHHHHHHHHHHHHH-TTEECEEE--
T ss_pred             hhhhccccccc--ccchhhHHHHHHHHHHHHHHHHHHCCCeECCC-CceEEEEECCCCCHHHHHHHHHH-CCCEECCC--
Confidence            88888777753  46778899999999999999999999999877 56689999986556666666655 49999753  


Q ss_pred             CCCCCCCeEEEEccCCHHHHHHHHHHHHHh
Q 036024          242 FGPGGEEYIRISGFGHRESILEASRRLEAL  271 (272)
Q Consensus       242 ~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~  271 (272)
                           ++++|+|+. +++|+++++++|+++
T Consensus       311 -----~~~vRis~g-~~ee~~~l~~~l~~f  334 (334)
T d2f8ja1         311 -----REGVRITIG-KREENDMILRELEVF  334 (334)
T ss_dssp             -----TTEEEEECC-CHHHHHHHHHHHHHC
T ss_pred             -----CCeEEEEcC-CHHHHHHHHHHHhcC
Confidence                 479999984 677889999999864

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=1.4e-34  Score=249.63  Aligned_cols=254  Identities=15%  Similarity=0.115  Sum_probs=197.2

Q ss_pred             cccccccCccc-chHHhcccc-eeEEe-ecCCCCCcccCCCC--------CCCceEEEEecCCCccccCCCHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYL-ECGPGNNFFPDLKG--------TSRTDIIFFCSPNNPTGHAATQNQLEQLVE   72 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~-~~~~~~~~~~dl~~--------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~   72 (272)
                      |.|++..|++. |...+...| +.+.+ +..+++++..|++.        .++++++++++||||||.+++.+++++|++
T Consensus       131 d~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~  210 (412)
T d1ajsa_         131 TPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIAS  210 (412)
T ss_dssp             SCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHH
T ss_pred             CEEEEeCCcchhhHHHHHHcCCeEEEeecccccccccccHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHH
Confidence            67899999998 888999999 76554 44455566666432        367788888899999999999999999999


Q ss_pred             HHHHcCCEEEEcccCCccccCCCC---CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHh
Q 036024           73 FARNNGSIIIFDSAYAAYVTDGCP---RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNR  149 (272)
Q Consensus        73 ~~~~~~~~vi~D~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~  149 (272)
                      +|++|++++|+||+|.++.+++..   .+........++++++.|+||.++++|+|+||++++...... ..+....+..
T Consensus       211 la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~-~~~~~~~~~~  289 (412)
T d1ajsa_         211 VMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDS-ILRVLSQMQK  289 (412)
T ss_dssp             HHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHH-HHHHHHHHHH
T ss_pred             HHhhCCEEEEecHhhhhhhcCCcccchhhhhhhhhhcccccccccccccccCCCCCccccccchhHHHH-HHHHHHHHHH
Confidence            999999999999999999887632   122222334466799999999999999999999998876321 1112333333


Q ss_pred             hhhhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCCC
Q 036024          150 IICTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGRK  220 (272)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~~  220 (272)
                      ........++...|.++..++.+..     .++++.++++++++++.+.+.|++++    +.+..+++|+|.|+.+.   
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~~i~~~~G~F~~~~ls---  366 (412)
T d1ajsa_         290 IVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN---  366 (412)
T ss_dssp             HHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC---
T ss_pred             HhhccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeecCCCeEEEecCCC---
Confidence            4445566688888988888876433     25678889999999999999999985    44566789999997663   


Q ss_pred             hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHhC
Q 036024          221 SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEALF  272 (272)
Q Consensus       221 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~l  272 (272)
                       .+.+.+|++++||++.||+          ||+++ .++++++.+.++|++++
T Consensus       367 -~~~v~~L~~e~gV~~vpg~----------Ri~~ag~~~~~i~~~a~aI~~av  408 (412)
T d1ajsa_         367 -PKQVEYLINQKHIYLLPSG----------RINMCGLTTKNLDYVATSIHEAV  408 (412)
T ss_dssp             -HHHHHHHHHTTCEECCTTS----------EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHhCCEEEeCCC----------eEEeccCCHHHHHHHHHHHHHHH
Confidence             4678889999999998864          99985 58889999999988763

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.98  E-value=6.9e-33  Score=237.60  Aligned_cols=253  Identities=13%  Similarity=0.032  Sum_probs=193.3

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC--------CCCceEEEEecCCCccccCCCHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG--------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEF   73 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~   73 (272)
                      |.|++..|++. |...++..| ++++++...+.++..+.+.        .++++++++++||||||.+++.+++++|+++
T Consensus       118 d~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~l  197 (394)
T d2ay1a_         118 LRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASI  197 (394)
T ss_dssp             CCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHH
T ss_pred             eEEEEecccccchHHHHHHcCCEEEEecccchhcccccchhHHHHHhhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Confidence            67888888887 889999999 9999999877666555221        3556667777999999999999999999999


Q ss_pred             HHHcCCEEEEcccCCccccCCCCC-Ccccc-CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh
Q 036024           74 ARNNGSIIIFDSAYAAYVTDGCPR-SIYEI-PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII  151 (272)
Q Consensus        74 ~~~~~~~vi~D~~~~~~~~~~~~~-~~~~~-~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~  151 (272)
                      |+++++++|+||+|.++.+++... +.... .....+++++.|+||.++.+|+|+||++++...... ..+.........
T Consensus       198 a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~-~~~~~~~~~~~~  276 (394)
T d2ay1a_         198 LEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAAT-RELAQGAMAFLN  276 (394)
T ss_dssp             HHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHH-HHHHHHHHHHHH
T ss_pred             hhcceEEEEEeccchhhcccccccchhhhhhhhhcccccccccccccccCCcccccchhhchhHHHH-HHHhhhhhHhhh
Confidence            999999999999999998875421 12111 112345789999999999999999999998877321 111122223333


Q ss_pred             hhccCCcchHHHHHHHHhccccc-----HHHHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCceEEEeecCCCChH
Q 036024          152 CTCFNGASNIAQAGGLACLSSEG-----LEAVHSVVDYYKENTKILIDTLASLG----IKVYGGINAPYVWAHFPGRKSW  222 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~i~l~~~~~~  222 (272)
                      ......++...|.++...+.+..     .++++.++++++++++.+.+.|++++    +.+..+++|+|+|+.++    .
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls----~  352 (394)
T d2ay1a_         277 RQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGAT----P  352 (394)
T ss_dssp             HTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCC----H
T ss_pred             cccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceeeECCCceeEEecCcC----H
Confidence            44455577777777777776433     26778888999999999999998863    56677889999998774    4


Q ss_pred             HHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc-CCHHHHHHHHHHHHHh
Q 036024          223 DVFAEILEKTHITTVPGSGFGPGGEEYIRISGF-GHRESILEASRRLEAL  271 (272)
Q Consensus       223 ~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~-~~~~~i~~~l~~l~~~  271 (272)
                      +++.+|++++||++.||.          |||++ .++++++.+.++|.++
T Consensus       353 ~~~~~L~~~~~V~~~~g~----------Ri~~a~l~~~~i~~l~~ai~~v  392 (394)
T d2ay1a_         353 EQVKRIKEEFGIYMVGDS----------RINIAGLNDNTIPILARAIIEV  392 (394)
T ss_dssp             HHHHHHHHHHCEECCTTC----------EEEGGGCCTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCEEecCCC----------EEEecCCCHHHHHHHHHHHHHh
Confidence            678999999999998863          99985 4888999999988764

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.98  E-value=2e-32  Score=234.99  Aligned_cols=240  Identities=18%  Similarity=0.209  Sum_probs=180.8

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSII   81 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~v   81 (272)
                      |+|++..|++. |....+..+ +...+..+.+ .+.-.+  .+++++++++|||||||.+..          +..+++.+
T Consensus       156 ~~Vv~~~P~y~~Y~~~~~~~~~~~~~~~~D~~-~~~~~~--~~~~~ii~l~sPnNPtG~l~~----------~v~~~~~~  222 (425)
T d2hoxa1         156 SKVVAHAPFYPVFREQTKYFDKKGYVWAGNAA-NYVNVS--NPEQYIEMVTSPNNPEGLLRH----------AVIKGCKS  222 (425)
T ss_dssp             EEEEECSSCCHHHHHHHHHSCBTTEEEEEEGG-GGTTCS--CGGGEEEEEESSCTTTCCCCC----------CSSTTCEE
T ss_pred             CEEEEecCccccHHHHHHHcCCCCCccCCCHH-HHHhhC--CCCceEEEEECCCCCCcchhh----------hhhhCCEE
Confidence            67888888887 777776666 6555555433 221111  378999999999999998732          23468999


Q ss_pred             EEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024           82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI  161 (272)
Q Consensus        82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (272)
                      |.||+|.+..+.    +   +....+++|+++|+||.+|++|+|+||++++++.+       .+.+.........+++.+
T Consensus       223 I~DEaY~~~~f~----~---~~~~~~~~Ivl~S~SK~fglaGlRiGw~i~~~~~i-------~~~~~~~~~~~~~~vs~~  288 (425)
T d2hoxa1         223 IYDMVYYWPHYT----P---IKYKADEDILLFTMSKFTGHSGSRFGWALIKDESV-------YNNLLNYMTKNTEGTPRE  288 (425)
T ss_dssp             EEECTTCSTTTS----C---CCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHH-------HHHHHHHHHHHTSSCCHH
T ss_pred             EEeccccCcccc----c---hhhhcCCeEEEEeCHHhccCcchheeeEEeCCHHH-------HHHHHHhhccCcccCCHH
Confidence            999999753322    2   23345778999999999999999999988887663       567777777777779999


Q ss_pred             HHHHHHHhcccc----------cHHHHHHHHHHHHHHHHHHHHHHHhCCCe---------------EecCCCceEEEeec
Q 036024          162 AQAGGLACLSSE----------GLEAVHSVVDYYKENTKILIDTLASLGIK---------------VYGGINAPYVWAHF  216 (272)
Q Consensus       162 ~~~a~~~~l~~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~g~~---------------~~~~~~~~~~~i~l  216 (272)
                      .|.++.+++...          ..+..+..++.++++++.+.+.|++.+.-               ...+..+.|.|+.+
T Consensus       289 ~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~~~~~l~~~p~~~~~~f~~~~~~~~~~f~wl~~  368 (425)
T d2hoxa1         289 TQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKC  368 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEE
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeccCCccceeeeeeccCCCcceeeeeC
Confidence            999998888632          12456778899999999999999987421               12234566889988


Q ss_pred             CCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHHHHHHHHHHHHhC
Q 036024          217 PGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRESILEASRRLEALF  272 (272)
Q Consensus       217 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~i~~~l~~l~~~l  272 (272)
                      ...+ .+.+.++++++||.++||+.|+. +++++|+|+..++|++++++++|++++
T Consensus       369 ~~~~-~~~~~~lL~e~gI~v~pGs~FG~-~~~yvRisl~~~~e~ld~~l~rL~~~v  422 (425)
T d2hoxa1         369 EWEE-DKDCYQTFQNGRINTQNGVGFEA-SSRYVRLSLIKTQDDFDQLMYYLKDMV  422 (425)
T ss_dssp             CSGG-GCSHHHHHHHTTEECEEGGGGTS-CTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred             CCCh-HHHHHHHHHhCCEEEEechhcCC-CCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            7533 34466778888999999999974 468999999889999999999999864

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.89  E-value=5e-23  Score=173.98  Aligned_cols=219  Identities=18%  Similarity=0.161  Sum_probs=143.6

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV   91 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~   91 (272)
                      +...++..| +.+  ..+.   .+ ++++  .+++|+|++++|+||++  ++.+++++|+++|+++|+++++||+|+...
T Consensus       106 ~~~~~~l~g~~~v--~~~d---~e-~l~~~i~~~tk~i~~~~p~n~~~--~~~~~l~~i~~ia~~~~~~~i~De~y~~~~  177 (366)
T d2aeua1         106 IERSCKIVNAKYF--ESDK---VG-EILNKIDKDTLVIITGSTMDLKV--IELENFKKVINTAKNKEAIVFVDDASGARV  177 (366)
T ss_dssp             HHHHHHHTTCEEE--EESC---HH-HHHTTCCTTEEEEEECBCTTSCB--CCHHHHHHHHHHHHHHTCCEEEECTTHHHH
T ss_pred             HHHHHHhcCCeEE--CCCC---HH-HHHHhcCCCceEEEEEecCCCCc--CCHHHHHHHHHHhccCcEEEEEecCccccc
Confidence            666666666 543  3321   10 1222  37899999999999863  677899999999999999999999998665


Q ss_pred             cCCCCC-CccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhc
Q 036024           92 TDGCPR-SIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACL  170 (272)
Q Consensus        92 ~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l  170 (272)
                      ++.... ......    ..++++|+||.+  +|+|+||+++++++        ++.+...........+++.|.++.+.+
T Consensus       178 ~~~~~~~~~~~~~----~di~~~S~sK~~--~g~~~G~i~~~~~~--------i~~~~~~~~~~g~~~~~~~~~a~~~aL  243 (366)
T d2aeua1         178 RLLFNQPPALKLG----ADLVVTSTDKLM--EGPRGGLLAGKKEL--------VDKIYIEGTKFGLEAQPPLLAGIYRAL  243 (366)
T ss_dssp             HHHTTCCCHHHHT----CSEEEEETTSSS--SSCSCEEEEEEHHH--------HHHHHHHHHTTTCBCCHHHHHHHHHHH
T ss_pred             cccccCCCHhhcC----ceEEEecccccc--cccceeEEEecHHH--------HHHHHHHHhcccccCCHHHHHHHHHHH
Confidence            543222 222222    228899999976  57899999999988        666766666565667788888888777


Q ss_pred             ccccHHHHHHHHHHHHH----HHHHHHHHHHhC-C--CeEecCCCceEEEeecCCC------ChHHHHHHHHHhcCeEee
Q 036024          171 SSEGLEAVHSVVDYYKE----NTKILIDTLASL-G--IKVYGGINAPYVWAHFPGR------KSWDVFAEILEKTHITTV  237 (272)
Q Consensus       171 ~~~~~~~~~~~~~~~~~----~~~~l~~~L~~~-g--~~~~~~~~~~~~~i~l~~~------~~~~~~~~ll~~~gi~v~  237 (272)
                      +......+++..+..++    ..+.+....... +  .....+..+.+++......      ++.+++.+|++++||.+.
T Consensus       244 ~tl~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ll~~~gV~~i  323 (366)
T d2aeua1         244 KNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITI  323 (366)
T ss_dssp             HHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCEECS
T ss_pred             HhccHHHHHHHHHHHHHHHHHHHhhhhccccccccccCcccccCccchhccCCCcceeecccCHHHHHHHHHHhCCEEEE
Confidence            64332222222222222    112222222222 2  2223334566676665432      355688889999999999


Q ss_pred             CCCCCCCCCCCeEEEEccC
Q 036024          238 PGSGFGPGGEEYIRISGFG  256 (272)
Q Consensus       238 ~g~~~~~~~~~~~R~s~~~  256 (272)
                      ||..| +.+++++|||++.
T Consensus       324 p~~~~-p~~~~~lRis~~~  341 (366)
T d2aeua1         324 TVAGM-PGASKSLRIDLTS  341 (366)
T ss_dssp             TTSSS-CSSCCSEEEETTS
T ss_pred             ECCCC-CCCCCEEEEeccc
Confidence            99887 4568899999865

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.87  E-value=3.5e-21  Score=162.82  Aligned_cols=213  Identities=16%  Similarity=0.167  Sum_probs=157.4

Q ss_pred             CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCC-CCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG-AREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~g  123 (272)
                      +.++|++....+.+|.+.|   +++|+++|++|++++++||+|+..+++.....+....+ ..+..++++||||++|..|
T Consensus       177 ~~~~iv~egvySmdGd~ap---l~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~G  253 (396)
T d2bwna1         177 APKLIAFESVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG  253 (396)
T ss_dssp             SCEEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC
T ss_pred             CceeEEEEeeccCcccccc---cHhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccc
Confidence            4455666688889999988   89999999999999999999998888876666554322 3345699999999999888


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhh--ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICT--CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGI  201 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~  201 (272)
                         |++.++++.        ++.+.+....  .+...++....++.+.++....+..++.++.++.+.+++++.|...|+
T Consensus       254 ---g~v~~~~~~--------i~~l~~~~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~g~  322 (396)
T d2bwna1         254 ---GYIAASARM--------VDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGM  322 (396)
T ss_dssp             ---EEEEECHHH--------HHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             ---cccchhHHH--------HHHHHhhcchhhhcccCcHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence               998888877        5555544322  222234444444444444333334467788999999999999999999


Q ss_pred             eEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          202 KVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       202 ~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      .+.+. .++++.+.+.. ....++..+|++++||.+.+..++. |.+...+|++++  .|++||++++++|++++
T Consensus       323 ~~~~~-~spIvpv~ig~~~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~iw  396 (396)
T d2bwna1         323 PIIDH-GSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLW  396 (396)
T ss_dssp             CBCCC-SSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred             CcCCC-CCCEEEEEeCCHHHHHHHHHHHHHhCCEEEEEECCCcCCCCCeeEEEEeCccCCHHHHHHHHHHHHHhC
Confidence            88764 66777777763 2344566778887899998766554 556788999974  49999999999999864

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=7.3e-21  Score=161.23  Aligned_cols=231  Identities=9%  Similarity=0.034  Sum_probs=159.1

Q ss_pred             eeEEeecCCCCCcccCCCCC-CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCcccc
Q 036024           24 NIEYLECGPGNNFFPDLKGT-SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEI  102 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~  102 (272)
                      +++.++-+.....+..+.+. ++.++|++....+++|.+.+   +++|+++|++||+++++||+|+..+.+.......+.
T Consensus       145 ~~~~~~hnd~~~le~~l~~~~~~~~~vv~e~v~s~~G~i~p---l~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~  221 (383)
T d1bs0a_         145 QLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWL  221 (383)
T ss_dssp             EEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHH
T ss_pred             cceEecchHHHHHHHHhcccCCCceEEEecCCCCCCCcccc---hhHHHHHHHhcCcEEEeecceeeeecCCcccchHHH
Confidence            66666655432322223333 45566766799999999988   888899999999999999999988877665555544


Q ss_pred             CCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhh--hccCCcchHHHHHHHHhcccccHHHHHH
Q 036024          103 PGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIIC--TCFNGASNIAQAGGLACLSSEGLEAVHS  180 (272)
Q Consensus       103 ~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~  180 (272)
                      .+.. ..+.+.|++|.+|.+|   |++.++.+.        ++.+.....  ..+...++....++.+.++.......++
T Consensus       222 ~~~~-~~~~~~t~~ka~g~~G---g~v~~~~~~--------~~~l~~~~~~~~~s~~~~p~~~aa~~~a~~~~~~~~~~~  289 (383)
T d1bs0a_         222 QKVK-PELLVVTFGKGFGVSG---AAVLCSSTV--------ADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDA  289 (383)
T ss_dssp             TTCC-CSEEEEESSSTTSSCC---EEEEECHHH--------HHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHH
T ss_pred             cCCc-cccccccccccccccc---cccccchhH--------HHHHHhhchhhhhcccccchHHHHHHHHHHHHHhhhhHH
Confidence            4333 3367789999999887   998888877        455543332  2222233343344444444222244467


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCeEecCCCceEEEeecCCC-ChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--C
Q 036024          181 VVDYYKENTKILIDTLASLGIKVYGGINAPYVWAHFPGR-KSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--G  256 (272)
Q Consensus       181 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~~-~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~  256 (272)
                      .+++++++..++++.|.+.|+.+.+. .++++.+.+++. ...++...|+++ ||++.+..+.. +.+...+|+++.  .
T Consensus       290 ~~~~l~~~~~~~~~~l~~~g~~~~~~-~s~Ii~v~~g~~~~a~~~~~~L~~~-Gi~v~~~~~PtVp~g~~~lRi~~~a~h  367 (383)
T d1bs0a_         290 RREKLAALITRFRAGVQDLPFTLADS-CSAIQPLIVGDNSRALQLAEKLRQQ-GCWVTAIRPPTVPAGTARLRLTLTAAH  367 (383)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSCEECSC-CSSBCCEEEESHHHHHHHHHHHHHT-TEECCEECTTSSCTTCEEECCBCCTTC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCccCCC-CCCEEEEEECCHHHHHHHHHHHHHC-CceEEEEcCCCCCCCCceEEEEeCCCC
Confidence            88899999999999999999988764 456655666532 233556666655 99998765443 456778999974  4


Q ss_pred             CHHHHHHHHHHHHHh
Q 036024          257 HRESILEASRRLEAL  271 (272)
Q Consensus       257 ~~~~i~~~l~~l~~~  271 (272)
                      |+||++++++.|..+
T Consensus       368 t~edid~l~~~L~~~  382 (383)
T d1bs0a_         368 EMQDIDRLLEVLHGN  382 (383)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhc
Confidence            999999999999764

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=8.7e-20  Score=155.96  Aligned_cols=244  Identities=16%  Similarity=0.166  Sum_probs=169.7

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY   90 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~   90 (272)
                      +....++.| +++.+|+++++...++ ++.  .++++++++++.+|.||.+.|   +++|+++|+++|+++++|.+++..
T Consensus       129 ~~~~a~~~g~~v~~~~~~~~g~~~~~~~~~~i~~~t~lv~~~~v~~~tG~~~p---i~~i~~~~~~~g~~~~vD~~q~~g  205 (405)
T d1jf9a_         129 WQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVM  205 (405)
T ss_dssp             HHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTT
T ss_pred             HHHHHHHcCcEEEEECCCCCCcCCHHHHHHhccCCcEEEEEecCCCcccccCc---hHHhhhHHHHcCCeeecccceecc
Confidence            455567778 9999999876544443 111  489999999999999999999   888999999999999999999852


Q ss_pred             ccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcch-----------HHH--H-HhhhhhccC
Q 036024           91 VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPV-----------IND--F-NRIICTCFN  156 (272)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~-----------~~~--~-~~~~~~~~~  156 (272)
                         ..+..+..+..+    +++.|..|.+|.+|  +|++..+++.+....+..           .+.  + .........
T Consensus       206 ---~~~id~~~~~~D----~~~~s~hK~~Gp~G--~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~G  276 (405)
T d1jf9a_         206 ---HHPVDVQALDCD----FYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAG  276 (405)
T ss_dssp             ---TSCCCHHHHTCS----EEEEEGGGTTSCSS--CEEEEECHHHHTTCCCSSCSSSSEEECCTTTCCEECCTTGGGCCS
T ss_pred             ---ccccchhhcCCc----eeeccccccccCCC--ceeeeechhhhcccCcccccccccCccccccccccccchhhhcCC
Confidence               223334444322    89999999998777  799998887643211100           000  0 000111223


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecCC-CceEEEeecCCCChHHHHHHHHHhcCe
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGGI-NAPYVWAHFPGRKSWDVFAEILEKTHI  234 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~i~l~~~~~~~~~~~ll~~~gi  234 (272)
                      +.+..+..++.+.++.......+...++.+...+++.+.++..+ ....++. .+..+.+.+++....++... ++++||
T Consensus       277 T~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~~~~~~~~~~r~~ivsf~~~~~~~~~~~~~-L~~~gI  355 (405)
T d1jf9a_         277 TPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSF-LDNYGI  355 (405)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTCCHHHHHHH-HHHTTE
T ss_pred             CCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhhhhcCCcccccCCcCcCcEEEEEcCCCCHHHHHHH-HHHCCc
Confidence            46666666666666533333457777788888888899998884 4444442 35577788887777665555 567799


Q ss_pred             EeeCCCCCC------CCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          235 TTVPGSGFG------PGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       235 ~v~~g~~~~------~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      .++.|++|.      ...++.+|+|+  ++|++|+++++++|+++
T Consensus       356 ~v~~G~~c~~~~~~~~~~~g~iRiS~~~ynt~eDid~l~~~l~~i  400 (405)
T d1jf9a_         356 AVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI  400 (405)
T ss_dssp             ECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEccchhhhhHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            999998875      23367899995  67999999999999876

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.84  E-value=8.9e-20  Score=154.62  Aligned_cols=240  Identities=14%  Similarity=0.082  Sum_probs=155.5

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccC---CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc----CCEEEEcc
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPD---LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN----GSIIIFDS   85 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~d---l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~----~~~vi~D~   85 (272)
                      ....+..| +++.+|.+.......+   +++  .++++++++++++||||.+.+   +++|.++|+++    ++.+++|.
T Consensus       110 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~~t~~v~i~~~~n~tG~~~~---~~~I~~l~~~~~~~~~~~~~vD~  186 (381)
T d1elua_         110 QAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDG  186 (381)
T ss_dssp             HHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEEC
T ss_pred             ccccccccccccccccccccccchHHHHHHhhhcccccccccccccccccccch---hhHHHHHHhhccccccccccccc
Confidence            44556678 8888888755333221   222  378999999999999999999   66777788774    69999999


Q ss_pred             cCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHH-------------H-Hhhh
Q 036024           86 AYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVIND-------------F-NRII  151 (272)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~-------------~-~~~~  151 (272)
                      +++...   .+..+..+.    ..+++.|++|.++. ...+|++..++.......+.....             + ....
T Consensus       187 ~~~~g~---~~~~~~~~~----~D~~~~s~~K~~~~-p~G~g~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  258 (381)
T d1elua_         187 AQSAGS---LPLDFSRLE----VDYYAFTGHKWFAG-PAGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGK  258 (381)
T ss_dssp             TTTBTT---BCCCTTTSC----CSEEEEESSSTTCC-CTTCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGG
T ss_pred             cccccc---ccccccccc----cccccccccccccc-cchhhHHHhhHHHHHhcCccccccccccccccccccccccccc
Confidence            987522   122333322    22889999999873 345788888777643211100000             0 0001


Q ss_pred             hhccCCcchHHHHHHHHhcccccHH-HHHHHHHHHHHHHHHHHHHHHhC-CCeEecC--CCceEEEeecCCCChHHHHHH
Q 036024          152 CTCFNGASNIAQAGGLACLSSEGLE-AVHSVVDYYKENTKILIDTLASL-GIKVYGG--INAPYVWAHFPGRKSWDVFAE  227 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~i~l~~~~~~~~~~~  227 (272)
                      .....+.+.....++.+++...... ..+.+.++.+++.+++.+.|+++ |+++.++  ..+.++++.+++....+.+.+
T Consensus       259 ~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~vsf~~~~~~~~~~i~~  338 (381)
T d1elua_         259 RFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPLGHRAIVQ  338 (381)
T ss_dssp             GGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSSCHHHHHH
T ss_pred             ccccccccchhhhhhhhhhhhHHHhcccccchhhhhhHHHHHHHHHhcCCCeEecCCCCccccEEEEEcCCCCCHHHHHH
Confidence            1122335555555555555422221 22455688888999999999998 8888653  235577777775555455556


Q ss_pred             HHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          228 ILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       228 ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      .|+++||.++..     ..++++|+|+  ++|++|+++++++|+++
T Consensus       339 ~L~~~gi~v~~~-----~~~~~lRis~~~~nt~edid~ll~~l~e~  379 (381)
T d1elua_         339 KLEEQRIYLRTI-----ADPDCIRACCHYITDEEEINHLLARLADF  379 (381)
T ss_dssp             HHHHTTEECEEE-----TTTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred             HHHhCCcEEEec-----CCCCEEEEecCCCCCHHHHHHHHHHHHhh
Confidence            667779988642     1257999995  56999999999999875

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.84  E-value=1.1e-19  Score=152.90  Aligned_cols=251  Identities=15%  Similarity=0.092  Sum_probs=150.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC----------CCCceEEEEecCCCccccCCCHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG----------TSRTDIIFFCSPNNPTGHAATQNQLEQLV   71 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~----------~~~~~~i~~~~p~nptG~~~~~~~l~~l~   71 (272)
                      |.|++..+... ....+...| +++.+|.+...++.+|++.          ..+++++++++|+||||.+.+   +++|+
T Consensus        87 d~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~---l~~I~  163 (364)
T d2e7ja1          87 AWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKKIA  163 (364)
T ss_dssp             CEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---HHHHH
T ss_pred             cEEEeecccccccchHHHhccceEEEeeeccccccccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeec---chhhe
Confidence            45565544332 334456778 9999999877677777543          144678889999999999987   88999


Q ss_pred             HHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhh
Q 036024           72 EFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII  151 (272)
Q Consensus        72 ~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~  151 (272)
                      ++|++||+++++|++|+....   +.....+..    .++++|++|.+|.+| ++||++++++.................
T Consensus       164 ~ia~~~~i~livD~a~~~g~~---~~~~~~~g~----D~~~~S~~K~~~~~g-~~g~l~~~~~~~~~~~~~~~~~~~~~~  235 (364)
T d2e7ja1         164 KVCSEYDVPLLVNGAYAIGRM---PVSLKEIGA----DFIVGSGHKSMAASG-PIGVMGMKEEWAEIVLRRSEKYKNKEV  235 (364)
T ss_dssp             HHHHTTTCCEEEECTTTBTTB---CCCHHHHTC----SEEEEEHHHHSSCCS-SCEEEEECTTTTTTTTCBCSSCTTSBG
T ss_pred             eccccccchhhccccchhhhh---hhccccccc----ceeeeccccccCCCC-CEEEEEECHHHHHHHHhhccccCcccc
Confidence            999999999999999974222   233444422    288999999998665 799999988774322111000000011


Q ss_pred             hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC--CceEEEeecC--------CCCh
Q 036024          152 CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI--NAPYVWAHFP--------GRKS  221 (272)
Q Consensus       152 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~~i~l~--------~~~~  221 (272)
                      .............++.+.+.. ..+..+... ...++.+++.+.|.++|+.+....  .....++..+        ....
T Consensus       236 ~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (364)
T d2e7ja1         236 ELLGCTARGATIITLMASFPH-VRERIKRWD-EEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGG  313 (364)
T ss_dssp             GGTTCCCCSHHHHHHHHHHHH-HHHHGGGHH-HHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECHHHHHHHHHSSSG
T ss_pred             cccccccchhHHHHHHHHHHH-HHHHHHHHH-HHHHHHHHHHHHHHHcCCeecCCCCCCcceEEEeccchHHHHHHhhcc
Confidence            111111222333333333321 112222222 334567788889998888775432  2333444432        1112


Q ss_pred             HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc-cCCHHHHHHHHHHHHHhC
Q 036024          222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRISG-FGHRESILEASRRLEALF  272 (272)
Q Consensus       222 ~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~-~~~~~~i~~~l~~l~~~l  272 (272)
                      .......+...|+....     ++....+|++. ..+++++++++++|++++
T Consensus       314 ~~~~~~~l~~~~~~~~~-----~g~~~~~~~~~~~~t~edid~~~~~l~ei~  360 (364)
T d2e7ja1         314 RFFLYRELKSRKIHGIK-----PGLTRYFKLSTYGLSDEEVDYVLNAFKEII  360 (364)
T ss_dssp             GGHHHHHHHHTTEECSC-----TTCCSEEEEECTTCCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHhcCCceec-----CCCcceEEEeccCCCHHHHHHHHHHHHHHH
Confidence            22334444555765321     22245678874 568999999999998863

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=6.4e-19  Score=149.84  Aligned_cols=252  Identities=13%  Similarity=0.083  Sum_probs=156.2

Q ss_pred             cccccccCccc-ch---HHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LE---DEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~---~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++..+.+. +.   ..++..| ++..+|.+.++.+.++ +++  .++|+++++++++||||.+++   +++|+++|+
T Consensus        94 d~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~~~~~i~~~T~lv~is~~~n~tG~~~~---~~~I~~~~~  170 (391)
T d1p3wa_          94 KHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQD---IAAIGEMCR  170 (391)
T ss_dssp             CEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCCBCC---HHHHHHHHH
T ss_pred             CEEEEeccccchHHHHHHHHHHcCCEEEEeCCCCCCeEcHHHHHHhCCCCcEEEEEECCCCCCeeECC---HHHHHHHhc
Confidence            55666655554 32   2334567 9999998765443333 221  389999999999999999998   788999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhcc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCF  155 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (272)
                      ++|+++++|.+|.....   +..+....    .-+++.|.+|.+|.+|  +|++..+++......+.... .........
T Consensus       171 ~~~~~~ivD~~~~~g~~---~~d~~~~~----~D~~~~s~~k~~g~~g--~g~~~~~~~~~~~~~~~~~g-g~~~~~~~~  240 (391)
T d1p3wa_         171 ARGIIYHVDATQSVGKL---PIDLSQLK----VDLMSFSGHKIYGPKG--IGALYVRRKPRVRIEAQMHG-GGHERGMRS  240 (391)
T ss_dssp             HHTCEEEEECTTTBTTB---CCCTTTSC----CSEEEEESTTTTSCSS--CEEEEECBTTBCCCCCSSCS-SCTTTTTSC
T ss_pred             cCCcEEEEeeccccCCc---cccchhcc----ccccccccccccCCCc--eEEEEEecchhcccCCcccC-CccccCccc
Confidence            99999999999975321   22222222    1278889999998776  68888877764332221111 111111222


Q ss_pred             CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEecC--C-CceEEEeecCCCChHHHHHHHHHh
Q 036024          156 NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-IKVYGG--I-NAPYVWAHFPGRKSWDVFAEILEK  231 (272)
Q Consensus       156 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~-~~~~~~i~l~~~~~~~~~~~ll~~  231 (272)
                      .+.+.....++...+. ...+...+..+++++....+.+.|..++ ..+...  . ....+.+..++....++...+   
T Consensus       241 ~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---  316 (391)
T d1p3wa_         241 GTLPVHQIVGMGEAYR-IAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMAL---  316 (391)
T ss_dssp             SCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTTTSTTEEECSCTTTSCTTEEEEEETTSCHHHHHHHT---
T ss_pred             Ccchhhhhhhhhhhhh-HHHHHhhHHHHHHHHHHHHHHHHHHhhcCeeecccccccCceEEEEEeCCCChHHHHHHh---
Confidence            3334333333333333 2223445556778888888888888874 333221  1 234455666766666655544   


Q ss_pred             cCeEeeCCCCCCCCC-----------------CCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          232 THITTVPGSGFGPGG-----------------EEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       232 ~gi~v~~g~~~~~~~-----------------~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      .++.++.|..|.+..                 .+.+|+|+  ++|++|++++++.|++++
T Consensus       317 ~~i~v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~~l  376 (391)
T d1p3wa_         317 KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSI  376 (391)
T ss_dssp             TTEECBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEccccccCCccchhHHHHHcCCCccccCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence            378887787664211                 25799996  569999999999998763

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.81  E-value=1.3e-18  Score=148.75  Aligned_cols=244  Identities=17%  Similarity=0.152  Sum_probs=168.6

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY   90 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~   90 (272)
                      +....+..| ++..+|.+.+.....+ ++.  .++++++.+++.+|-||..++   +++|.++|+++|+++++|.+++. 
T Consensus       129 ~~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~~~t~lv~i~~~~~~tG~~~p---~~~i~~~~~~~g~~~ivDa~q~~-  204 (408)
T d1t3ia_         129 WQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSA-  204 (408)
T ss_dssp             HHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT-
T ss_pred             hhhhhhccCceEeeeeccccccccHHHhhhccCCCceEEEEecccccccccCc---HHHHhhhhhccCceeeeccceec-
Confidence            334556677 8888888766554444 222  389999999999999999999   78889999999999999999975 


Q ss_pred             ccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHH--------------hhhhhccC
Q 036024           91 VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFN--------------RIICTCFN  156 (272)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~  156 (272)
                        +..+..+..+..+    +++.|..|.+|.+|  +|+++.+++.....-+. ...+.              ........
T Consensus       205 --g~~~id~~~~~~D----~~~~s~hK~~gp~G--~g~l~v~~~~~~~~~p~-~~g~~~~~~~~~~~~~~~~~~~r~e~G  275 (408)
T d1t3ia_         205 --PHYPLDVQLIDCD----WLVASGHKMCAPTG--IGFLYGKEEILEAMPPF-FGGGEMIAEVFFDHFTTGELPHKFEAG  275 (408)
T ss_dssp             --TTSCCCHHHHTCS----EEEEEGGGTTSCTT--CEEEEECHHHHHHSCCC-SCSTTSEEEECSSCEEECCTTGGGCCS
T ss_pred             --ccccccccccCCc----eEEeccccccCCCC--ccccccchhhhhcCCce-ecCCcccccccccccccCCchhhhcCC
Confidence              2223344444322    88999999887666  79999888763211000 00000              00011133


Q ss_pred             CcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC-----CceEEEeecCCCChHHHHHHHHH
Q 036024          157 GASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI-----NAPYVWAHFPGRKSWDVFAEILE  230 (272)
Q Consensus       157 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-----~~~~~~i~l~~~~~~~~~~~ll~  230 (272)
                      +.+.....++...++.......+++.++..+..+++.+.+.+. ++.+.++.     .+..+.+.+++.+..++...| +
T Consensus       276 t~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~iv~f~~~~~~~~~v~~~L-~  354 (408)
T d1t3ia_         276 TPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLHASDVATMV-D  354 (408)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBCHHHHHHHH-H
T ss_pred             cHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHhHHhhhhccCccccccCCCccccCcceEEEEEeCCCCHHHHHHHH-h
Confidence            4566666655665553223345777888888999999999887 66665432     245677788877777766655 6


Q ss_pred             hcCeEeeCCCCCCC------CCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          231 KTHITTVPGSGFGP------GGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       231 ~~gi~v~~g~~~~~------~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ++||.+..|+.|..      +..+.+|+|+  ++|++|++.+++.|++++
T Consensus       355 ~~gI~v~~G~~c~~~~~~~~~~~g~vRiS~~~ynt~~did~li~~L~~~~  404 (408)
T d1t3ia_         355 QDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATI  404 (408)
T ss_dssp             TTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             hCCcEEecCcccccHHHHhhcCCccEEEECCCCCCHHHHHHHHHHHHHHH
Confidence            66999999988752      3467899996  679999999999999763

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=5.8e-19  Score=150.25  Aligned_cols=209  Identities=17%  Similarity=0.143  Sum_probs=145.9

Q ss_pred             CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCC-CCCceEEEecCccccC-CC
Q 036024           45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG-AREVAIEISSFSKFSG-FT  122 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g-~~  122 (272)
                      ...++++.+..+..|...+   ++++.++|++||+++|+||+|+.+..+..........+ .++..++++|++|.+| .+
T Consensus       177 ~~~liv~egv~s~~G~~~~---L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~gg~~  253 (401)
T d1fc4a_         177 RHVLIATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGAS  253 (401)
T ss_dssp             SSEEEEEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSS
T ss_pred             CceEEEEcCCCCCCCchhh---hhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeecccccccCC
Confidence            3345555566777787766   99999999999999999999998888766555544432 3345589999999994 33


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhh--hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIIC--TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG  200 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g  200 (272)
                      |   |++.++.+.        ++.+.....  ......++....++...++..  ...++++++++++.+++++.+...|
T Consensus       254 G---g~v~g~~~~--------~~~l~~~~~~~~~s~~l~p~~~~aa~~~l~~~--~~~~~~~~~l~~~~~~~~~~l~~~g  320 (401)
T d1fc4a_         254 G---GYTAARKEV--------VEWLRQRSRPYLFSNSLAPAIVAASIKVLEMV--EAGSELRDRLWANARQFREQMSAAG  320 (401)
T ss_dssp             C---EEEEECHHH--------HHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             c---ccccCCHHH--------HHHHHcCChhhhhcCCCCHHHHHHHHhhhccc--ccCHHHHHHHHHHHHHHHhhhcccC
Confidence            4   888888877        444433321  122234444445455555421  2236788999999999999999999


Q ss_pred             CeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCC-CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          201 IKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFG-PGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       201 ~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      +.+.+. .++++.+.+.. ....++...|+++ ||++.+-.+.. |.+...+|+++.  .|+||++++++.|+++
T Consensus       321 ~~~~~~-~~pIv~v~~~~~~~a~~~~~~L~~~-Gi~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev  393 (401)
T d1fc4a_         321 FTLAGA-DHAIIPVMLGDAVVAQKFARELQKE-GIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRI  393 (401)
T ss_dssp             CCBCCS-SSSEEEEEEECHHHHHHHHHHHHHT-TEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CccCCC-CCCEEEEEECCHHHHHHHHHHHHHC-CceEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            888775 45666666653 2234566666655 99997654433 556677999974  4999999999999875

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.76  E-value=6.4e-17  Score=136.58  Aligned_cols=240  Identities=15%  Similarity=0.180  Sum_probs=144.4

Q ss_pred             Hhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024           18 EVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD   93 (272)
Q Consensus        18 ~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~   93 (272)
                      .++..| +++.+|+++++...++ +.+  .++++++++++++|+||...+.+++.++++. .+.++.+++|.+++...  
T Consensus       108 ~~~~~g~~v~~vp~~~~~~id~~~l~~~i~~~t~lv~is~v~~~tG~~~~~~~i~~~~~~-~~~~~~~~vD~~q~~g~--  184 (376)
T d1eg5a_         108 YLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKK-KNKETLVHVDAVQTIGK--  184 (376)
T ss_dssp             HHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHH-HCTTCEEEEECTTTTTT--
T ss_pred             HHHhcCCEEEEEcCCCCCeECHHHHHHhcCCCceEEEEECCccccceeeeehhhhhhhhh-cccCceeEEEeeecccc--
Confidence            345568 9999999865433332 221  3899999999999999999995555444432 34599999999997522  


Q ss_pred             CCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc
Q 036024           94 GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE  173 (272)
Q Consensus        94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~  173 (272)
                       .+..+..++    ..++++|.+|.+|.+|..+.|  ..++....+.   ...............+............ .
T Consensus       185 -~~~d~~~~~----~D~~~~s~~K~~gp~G~~~l~--~~~~~~~~p~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~  253 (376)
T d1eg5a_         185 -IPFSLEKLE----VDYASFSAHKFHGPKGVGITY--IRKGVPIRPL---IHGGGQERGLRSGTQNVPGIVGAARAME-I  253 (376)
T ss_dssp             -SCCCCTTTC----CSEEEEEGGGGTSCTTCEEEE--ECTTSCCCCS---BCSSCTTTTTBCSCCCHHHHHHHHHHHH-H
T ss_pred             -ccccccccC----ccceecccceeecCCCceeEE--eccCcccCCc---ccCCCCcccccCCcccchhhhhHHHHhh-c
Confidence             122333332    238999999999988865544  4443311111   1111111122223344454444444333 2


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCC---ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCC----
Q 036024          174 GLEAVHSVVDYYKENTKILIDTLASLGIKVYGGIN---APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGG----  246 (272)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~----  246 (272)
                      .................++.+.|...+........   .......+++....++.. .++++||.+++|+.|.+..    
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~L~~~gI~vr~G~~c~~~~~~~~  332 (376)
T d1eg5a_         254 AVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQN-LLSGYGIYVSTSSACTSKDERLR  332 (376)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTCCHHHHHH-HHHHTTEECBC------------
T ss_pred             cccchhhhhhhhhhhhhhhccccccccccccccccccccceeeeccCCCCHHHHHH-HHhhCCeEEeCcchhcCCccchh
Confidence            22333555666777778888888877555443222   334566677766655544 5677799999998775321    


Q ss_pred             -------------CCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          247 -------------EEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       247 -------------~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                                   .+.+|+|+  ++|++|++++++.|++++
T Consensus       333 ~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~~L~~iv  373 (376)
T d1eg5a_         333 HVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEIL  373 (376)
T ss_dssp             CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCcccCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence                         24699996  579999999999999864

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.72  E-value=1e-15  Score=127.64  Aligned_cols=251  Identities=12%  Similarity=0.024  Sum_probs=169.0

Q ss_pred             cccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc--CCEE
Q 036024            6 SVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN--GSII   81 (272)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~--~~~v   81 (272)
                      ++..+.|+. +...++.+| ++..+..++.....++....++++.+++++.++.||...+   +++|.++|+++  ++++
T Consensus        79 v~~~G~f~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~h~eTstG~~~~---i~~i~~~~~~~~~~~l~  155 (348)
T d1iuga_          79 VPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAKEGYAGLLLVHSETSTGALAD---LPALARAFKEKNPEGLV  155 (348)
T ss_dssp             EEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCCSSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTCEE
T ss_pred             eecchHHHHHHHHHHHhcCcccccccccCCCccccccccccCCCeeEEEecchhhhhhcc---HHHHHHHHHhhhcccee
Confidence            344455655 667778888 8888888766555555445688999999999999999988   77778888776  5889


Q ss_pred             EEcccCCccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCc-----chHHHHHhhh-hhc
Q 036024           82 IFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGF-----PVINDFNRII-CTC  154 (272)
Q Consensus        82 i~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~  154 (272)
                      ++|.+.+.   +..+..+..+..+    ++++|..|.+ |.||  +|+++.+++.+.+.-+     .+...+.... ..+
T Consensus       156 ~vDavss~---g~~~i~~d~~~iD----~~~~~sqK~l~gppG--~~~v~~s~~~le~~~~~~~~~dl~~~~~~~~~~~~  226 (348)
T d1iuga_         156 GADMVTSL---LVGEVALEAMGVD----AAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQKEGES  226 (348)
T ss_dssp             EEECTTTB---TTBCCCSGGGTCS----EEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCC
T ss_pred             echhhhcc---cccccccccccCC----EEEeccccceecCCc--eeeeeechHHHhhhcccccccchhhhhhhhccCcc
Confidence            99998774   2223444444322    8888999998 7788  7999998876543211     1122222222 234


Q ss_pred             cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCc-eEEEeecC-CCChHHHHHHHHHhc
Q 036024          155 FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINA-PYVWAHFP-GRKSWDVFAEILEKT  232 (272)
Q Consensus       155 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~i~l~-~~~~~~~~~~ll~~~  232 (272)
                      .++++....+++.++++....+ ..+..+..+...+.+++.+++.|+...+...+ ..+.+.+| +.+..++...| +++
T Consensus       227 ~~Tp~v~~i~~l~~aL~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~s~~v~~~~~P~g~~~~~~~~~l-~~~  304 (348)
T d1iuga_         227 AWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGVPYARVKEAF-AQR  304 (348)
T ss_dssp             SSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTTCCHHHHHHHH-HTT
T ss_pred             cccccchHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHhhhhhhhhhccChhhcCCeEEEEECCCCCCHHHHHHHH-HHC
Confidence            5567787888888887633222 23333444445566677777778887654322 35678887 56667766655 566


Q ss_pred             CeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          233 HITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       233 gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ||.+.+|.  ++.....+||+.  ..+.+|++++++.|+++|
T Consensus       305 gi~i~~G~--~~l~~~~~RIg~mG~~~~~d~~~~~~~l~~~l  344 (348)
T d1iuga_         305 GAVIAGGQ--GPLKGKVFRLSLMGAYDRYEALGVAGMFREVL  344 (348)
T ss_dssp             TEECEECC--GGGTTTEEEECCCSSCCHHHHHHHHHHHHHHH
T ss_pred             CeEEEcCc--cccCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence            99998875  344456899994  458899999999988764

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=8.1e-17  Score=136.45  Aligned_cols=216  Identities=14%  Similarity=0.107  Sum_probs=149.0

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++++++++++.+|.||...+   +++|.++|+++|+++++|.+++...   .+..+..+..    .+++.|..|.++.|+
T Consensus       143 ~~~~~v~~~~~~n~tG~i~p---i~~i~~~~~~~g~~~~vD~~qs~g~---~~~d~~~~~~----D~~~~s~~K~~~gp~  212 (388)
T d1h0ca_         143 HKPVLLFLTHGESSTGVLQP---LDGFGELCHRYKCLLLVDSVASLGG---TPLYMDRQGI----DILYSGSQKALNAPP  212 (388)
T ss_dssp             HCCSEEEEESEETTTTEECC---CTTHHHHHHTTTCEEEEECTTTTTT---SCCCTTTTTC----SEEEEESSSTTCCCT
T ss_pred             CCcceEEEeeeeeccccccC---HHHHHHHhhcccccceecccccccc---cccccccccc----ceecccccccccCCC
Confidence            68899999999999999987   8999999999999999999998522   1233333322    288888999886443


Q ss_pred             cceeEEEecccccccCCcc----------hH--HHHH---hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHH
Q 036024          124 VRLGWTVVPEELLFSSGFP----------VI--NDFN---RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKEN  188 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~----------~~--~~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  188 (272)
                       -+|+++.++...+.....          ..  ..+.   ........+++.....+..+.+.......++.+.++.+++
T Consensus       213 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l  291 (388)
T d1h0ca_         213 -GTSLISFSDKAKKKMYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREA  291 (388)
T ss_dssp             -TCEEEEECHHHHHHHTTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             -ceEEEeecHHHHHhhhhccccccccccccchhhhhhhhccccccccccccHHHHHHHHHHHHHHHHhccccccccccch
Confidence             367777766542110000          00  0000   0011223345556666566655543334568888899999


Q ss_pred             HHHHHHHHHhCCCeEecCC----CceEEEeecC-CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE-c--cCCHHH
Q 036024          189 TKILIDTLASLGIKVYGGI----NAPYVWAHFP-GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS-G--FGHRES  260 (272)
Q Consensus       189 ~~~l~~~L~~~g~~~~~~~----~~~~~~i~l~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s-~--~~~~~~  260 (272)
                      .+++++.+...|+....+.    ....+.+.++ +.+..++...|++++||.+..|....  ..+.+|+| +  +++++|
T Consensus       292 ~~~l~~~~~~~g~~~~~~~~~~rs~~i~~~~~p~~~~~~~~~~~L~~~~gI~v~~G~~~~--~~~~iRis~~g~~~t~ed  369 (388)
T d1h0ca_         292 AAYLHGRLQALGLQLFVKDPALRLPTVTTVAVPAGYDWRDIVSYVIDHFDIEIMGGLGPS--TGKVLRIGLLGCNATREN  369 (388)
T ss_dssp             HHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGG--TTTEEEEECCGGGCSHHH
T ss_pred             hHHHHHHHhhcCcccccCCHHHcCCeEEEEECCCCCCHHHHHHHHHhcCCEEEeCCchhh--cCCEEEEeCCCCCCCHHH
Confidence            9999999998876654322    2345677786 56788888999999999999886432  35689999 4  468999


Q ss_pred             HHHHHHHHHHhC
Q 036024          261 ILEASRRLEALF  272 (272)
Q Consensus       261 i~~~l~~l~~~l  272 (272)
                      +++++++|+++|
T Consensus       370 id~li~aL~~~L  381 (388)
T d1h0ca_         370 VDRVTEALRAAL  381 (388)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999999874

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.68  E-value=4.4e-15  Score=124.27  Aligned_cols=214  Identities=14%  Similarity=0.104  Sum_probs=147.0

Q ss_pred             CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccC-C
Q 036024           43 TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSG-F  121 (272)
Q Consensus        43 ~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~  121 (272)
                      .++++++.+++.+|.||...+   +++|.++|+++|+++++|.+++-..   .+..+..+.    ..+++.|..|.++ .
T Consensus       125 ~~~~~~v~~~~~~~~tG~~~~---i~~i~~~~~~~g~~~~vDa~qs~G~---~~~d~~~~~----~D~~~~s~~K~l~gp  194 (361)
T d1m32a_         125 DPTISHIAMVHSETTTGMLNP---IDEVGALAHRYGKTYIVDAMSSFGG---IPMDIAALH----IDYLISSANKCIQGV  194 (361)
T ss_dssp             CTTCCEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTTTTT---SCCCTTTTT----CSEEEEESSSTTCCC
T ss_pred             ccCccceEEEeeecccccchh---hhhhhhhhcccceeeEeecccccCc---ccccccccc----cceEEeeecccccCC
Confidence            478999999999999999988   8899999999999999999998522   122333332    2388999999884 4


Q ss_pred             CccceeEEEecccccccCCcch----------HHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHH
Q 036024          122 TGVRLGWTVVPEELLFSSGFPV----------INDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTK  190 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~  190 (272)
                      +|  +|+++.+++......+..          .............+++.....+....+..... ...+...++.++..+
T Consensus       195 ~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  272 (361)
T d1m32a_         195 PG--FAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQR  272 (361)
T ss_dssp             SS--EEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CC--ceEEEechhhhhhhccccccccccchhhhccccccccccCCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence            57  788888776532111110          01111122333445677777666666653333 234566678888889


Q ss_pred             HHHHHHHhCCCeEecCC---CceEEEeecC---CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHH
Q 036024          191 ILIDTLASLGIKVYGGI---NAPYVWAHFP---GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESIL  262 (272)
Q Consensus       191 ~l~~~L~~~g~~~~~~~---~~~~~~i~l~---~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~  262 (272)
                      .+.+.++..|.....+.   +...+.+.++   +....++...|.++ ||.+.+|...   ..+.+|+|.  +.+++|++
T Consensus       273 ~l~~~~~~~g~~~~~~~~~rs~~v~~~~~p~~~~~~~~~~~~~l~~~-gi~i~~G~~~---~~~~~Ris~~g~~~~~di~  348 (361)
T d1m32a_         273 SLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQ-GFVIYPGKVS---QSDCFRIGNIGEVYAADIT  348 (361)
T ss_dssp             HHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHT-TEECEECCCS---SSCEEEEECCSSCCHHHHH
T ss_pred             HHHHHHhhcCCcccCChhhcCCcEEEEECCCCCCCCHHHHHHHHHHC-CcEEECCCcC---CCCEEEEeCCCCCCHHHHH
Confidence            99999998886664432   2334556665   34556666666555 9999888633   357899994  56899999


Q ss_pred             HHHHHHHHhC
Q 036024          263 EASRRLEALF  272 (272)
Q Consensus       263 ~~l~~l~~~l  272 (272)
                      +++++|+++|
T Consensus       349 ~lv~al~~~L  358 (361)
T d1m32a_         349 ALLTAIRTAM  358 (361)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHHc
Confidence            9999999986

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.63  E-value=6.2e-15  Score=124.05  Aligned_cols=243  Identities=16%  Similarity=0.136  Sum_probs=156.9

Q ss_pred             HHhcccc-eeEEeecCCCCCcccCCCC----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPDLKG----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV   91 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~   91 (272)
                      ......+ ....+..........+...    .++++++.+++.+|.||...+   ++++.++|+++++.+++|.+++.  
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~---i~~i~~~~~~~g~~~~vDa~~~~--  184 (377)
T d1vjoa_         110 DMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFGTLLLVDTVTSL--  184 (377)
T ss_dssp             HHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTTT--
T ss_pred             hhhhhhcccccccccCCCCcccchhhhhhhhcCcceeeeeeeeeccceeeec---hhhhhhhhhhccceEEEecchhh--
Confidence            3444455 5555555444333322111    267889999999999999988   89999999999999999999974  


Q ss_pred             cCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc----------chH--HHHHhhhhhccCCcc
Q 036024           92 TDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF----------PVI--NDFNRIICTCFNGAS  159 (272)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~----------~~~--~~~~~~~~~~~~~~~  159 (272)
                       +..+..+..+..    .+++.|.+|.++.|+ .+|++...+..+.....          ...  ............+++
T Consensus       185 -g~~~~~~~~~~~----d~~~~s~~K~~~gp~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (377)
T d1vjoa_         185 -GGVPIFLDAWGV----DLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAP  258 (377)
T ss_dssp             -TTSCCCTTTTTC----SEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCC
T ss_pred             -hhhhhccccccc----ceeeecccccccCCC-EEEEecchhhHHhhhhccCCCCcceeeccchhhhccCcccccccccc
Confidence             222333444432    278889999775332 36776766654210000          000  001111122333344


Q ss_pred             hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC---CceEEEeecC-CCChHHHHHHHHHhcCeE
Q 036024          160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI---NAPYVWAHFP-GRKSWDVFAEILEKTHIT  235 (272)
Q Consensus       160 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~i~l~-~~~~~~~~~~ll~~~gi~  235 (272)
                      .....++..+.........+...++.+++.+++.+.+.+.++....+.   ....+.+.++ +.++.++...|++++||.
T Consensus       259 ~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~~~~~~~l~~~L~~~~gI~  338 (377)
T d1vjoa_         259 INLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIE  338 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEE
T ss_pred             eechhhhHHHHhhhhhcCchHHHHHHHHHhhhhhhhhhccCceeecChHhcCCeEEEEECCCCCCHHHHHHHHHhcCCEE
Confidence            444444444444333455688889999999999999999877664322   2345667776 567888888998999999


Q ss_pred             eeCCCCCCCCCCCeEEEEc---cCCHHHHHHHHHHHHHhC
Q 036024          236 TVPGSGFGPGGEEYIRISG---FGHRESILEASRRLEALF  272 (272)
Q Consensus       236 v~~g~~~~~~~~~~~R~s~---~~~~~~i~~~l~~l~~~l  272 (272)
                      +..|...  ...+.+|+|.   .+++||+++++++|+++|
T Consensus       339 v~~G~~~--~~~~~~Ris~~g~~~t~edi~~lv~al~~~l  376 (377)
T d1vjoa_         339 VGGGLGE--LAGKVWRVGLMGFNSRKESVDQLIPALEQVL  376 (377)
T ss_dssp             CEECCGG--GTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             EecCccc--ccCCEEEEecCcCCCCHHHHHHHHHHHHHHh
Confidence            9888743  2356899993   357999999999999874

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=3.6e-15  Score=126.57  Aligned_cols=205  Identities=11%  Similarity=0.100  Sum_probs=143.1

Q ss_pred             CCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.++++-.-+...| ...+++.+++|.++|+++|+++|+||++.++...+.......+...+|.  +  +++|.+| .
T Consensus       187 ~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~a~~~~gv~PDi--~--~~gK~l~-g  261 (404)
T d2byla1         187 PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDI--V--LLGKALS-G  261 (404)
T ss_dssp             TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSE--E--EECGGGG-T
T ss_pred             CCeEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccccccccccccchhhhcCCCCCE--E--EECchhh-C
Confidence            4555566543355556 4566778999999999999999999999987555554444444444553  2  7899998 5


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-  200 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-  200 (272)
                      | +.+|.++++++.        .+.+......++++.++++..|+.+.++....   +...++.+++.+++++.|.++- 
T Consensus       262 G~~p~~av~~~~~i--------~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~l~~l~~  330 (404)
T d2byla1         262 GLYPVSAVLCDDDI--------MLTIKPGEHFSTYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNELMKLPS  330 (404)
T ss_dssp             TSSCCEEEEECHHH--------HTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTSCT
T ss_pred             CCccceeeeechhh--------hhccCCCCCCcCCCcCHHHHHHHHHHHHHHHh---cCchhhhhHhhHHHHHHHHhhcc
Confidence            5 789999998887        34444445556667889999988888874333   4456677777788888888761 


Q ss_pred             --CeEecCCCceEEEeecC---CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          201 --IKVYGGINAPYVWAHFP---GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       201 --~~~~~~~~~~~~~i~l~---~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                        +.-... .|.+..+.+.   .....++..+++++ |+.+.+..      .+.+|++  +..+++++++++++|+++|
T Consensus       331 ~~i~~vRg-~Gl~~~i~~~~~~~~~~~~~~~~l~~~-Gvl~~~~~------~~~i~l~PpL~it~~~id~~~~~l~~al  401 (404)
T d2byla1         331 DVVTAVRG-KGLLNAIVIKETKDWDAWKVCLRLRDN-GLLAKPTH------GDIIRFAPPLVIKEDELRESIEIINKTI  401 (404)
T ss_dssp             TTEEEEEE-ETTEEEEEECCCSSCCHHHHHHHHHHT-TEECEEEE------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             ccceeeee-cccEEEEEEecCCchhHHHHHHHHHhC-CeEEecCC------CCEEEEECCcCCCHHHHHHHHHHHHHHH
Confidence              211221 3455555554   33455677777766 99987632      4579998  4569999999999999864

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.63  E-value=9e-16  Score=126.79  Aligned_cols=207  Identities=15%  Similarity=0.126  Sum_probs=128.4

Q ss_pred             CCceEEEEe-cCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFC-SPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ++++.+++. .++|++|.+.+.+++++|+++|+++++++++|+++..+................  ...+.+.+|  +..
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~  202 (343)
T d1m6sa_         127 PRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYA--DSVMFCLSK--GLC  202 (343)
T ss_dssp             CCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTC--SEEEEESSS--TTC
T ss_pred             ccccccccccccccCCceecCHHHHHHHHHHHHhcCeEEEeccccccccccccccchhhhcccc--ccccccccc--ccc
Confidence            456666665 779999999999999999999999999999999998655433222222221111  133333333  334


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GI  201 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~  201 (272)
                      |...|+++...+.        +............+.+.....++.......   ......+...++...+.+.+.++ +.
T Consensus       203 g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (343)
T d1m6sa_         203 APVGSVVVGDRDF--------IERARKARKMLGGGMRQAGVLAAAGIIALT---KMVDRLKEDHENARFLALKLKEIGYS  271 (343)
T ss_dssp             CSSCEEEEECHHH--------HHHHHHHHHHHTCCCSSTHHHHHHHHHHHH---HSSTTHHHHHHHHHHHHHHHHHHTCB
T ss_pred             ccccccccccHHH--------HhhhHhhCcccccccchhHHHHHhhhhhhh---hhHHHHHHHHHHHHHhhhHHHHhccC
Confidence            4556777777776        334433333333323333332222222211   11222344555666666666665 44


Q ss_pred             eEecCCCceEEEeecCC--CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          202 KVYGGINAPYVWAHFPG--RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       202 ~~~~~~~~~~~~i~l~~--~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ....+..++++++.+++  ....++...|.++ ||.+.|..      .+++|+++  ..|+||+++++++|++++
T Consensus       272 ~~~~~~~~~~v~~~~~~~~~~a~~l~~~L~~~-Gi~v~~~~------~~~iRi~~~~~~t~edid~~v~~l~~v~  339 (343)
T d1m6sa_         272 VNPEDVKTNMVILRTDNLKVNAHGFIEALRNS-GVLANAVS------DTEIRLVTHKDVSRNDIEEALNIFEKLF  339 (343)
T ss_dssp             CCGGGCCSSEEEEECTTSSSCHHHHHHHHHHH-TEECEEEE------TTEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCceEEEEEeCCCcccHHHHHHHHHHC-CCEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence            44555678899999873  4556777777666 99998643      57899986  458999999999999863

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.61  E-value=1.3e-14  Score=123.31  Aligned_cols=207  Identities=12%  Similarity=0.072  Sum_probs=137.0

Q ss_pred             CCceEEEEecCCCccccC-CCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGHA-ATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      +++.++++-.-+...|.. .+++.+++|.++|+++|+++|+||++.++...+.......+...+|.+    +++|.+| .
T Consensus       185 ~~iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~~e~~gv~PDiv----t~gK~l~-g  259 (404)
T d1z7da1         185 PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI----LLGKALS-G  259 (404)
T ss_dssp             TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE----EECGGGG-T
T ss_pred             CCEEEEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcccccccccccCCCCCEE----EEccccc-C
Confidence            455555554336566765 456779999999999999999999998775555444444554455532    6899998 5


Q ss_pred             c-cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCC
Q 036024          123 G-VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLG  200 (272)
Q Consensus       123 g-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g  200 (272)
                      | ..+|.++++++.        .+.+.......+++.++++..|+.+.++.... ...+...+.-....+.+.+.+++.+
T Consensus       260 G~~p~~~v~~~~~i--------~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  331 (404)
T d1z7da1         260 GHYPISAVLANDDI--------MLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSK  331 (404)
T ss_dssp             TSSCCEEEEECHHH--------HTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred             CCCCcccccchHHH--------HccCCCCCcCcCCCCCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhcCC
Confidence            5 788999999888        33444444555666788888888888873222 2233333334444445555555554


Q ss_pred             C--eEecCCCceEEEeecCC--CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          201 I--KVYGGINAPYVWAHFPG--RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       201 ~--~~~~~~~~~~~~i~l~~--~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                      +  .+.+  .|.+..+.+..  ....++..+++++ ||.+.+..      .+.+||+  +..+++++++++++|+++|
T Consensus       332 ~v~~vrg--~Gl~~~i~~~~~~~~~~~~~~~l~~~-Gl~~~~~~------~~~ir~~Ppl~it~~~id~~~~~l~~al  400 (404)
T d1z7da1         332 IVRDVRG--KGLLCAIEFKNELVNVLDICLKLKEN-GLITRDVH------DKTIRLTPPLCITKEQLDECTEIIVKTV  400 (404)
T ss_dssp             TEEEEEE--ETTEEEEEECTTTCCHHHHHHHHHHT-TEECCEET------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CeEEEEe--eCcEEEEEEcCCcccHHHHHHHHHhC-CeEEecCC------CCEEEEECCcCCCHHHHHHHHHHHHHHH
Confidence            3  2222  35566677752  3345566666665 99986533      4678998  5569999999999998864

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.61  E-value=2.6e-14  Score=117.76  Aligned_cols=207  Identities=12%  Similarity=0.031  Sum_probs=127.2

Q ss_pred             CceEE-EEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDII-FFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i-~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      .+... +...+.|++|...+.++++++.++|+++++++++|+++...........+.......+......+..|..+.. 
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  212 (345)
T d1v72a1         134 TTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLA-  212 (345)
T ss_dssp             SCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSS-
T ss_pred             cccceeeeeeccccccccccchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhccccccccccCcccccccc-
Confidence            34444 4447888999999999999999999999999999999976444332222222211222234444444433322 


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIK  202 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~  202 (272)
                        .+.........       .............+.+..... +.............+...+..++.+++.+.+.++ |+.
T Consensus       213 --~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  282 (345)
T d1v72a1         213 --AEAIVLFNTSL-------ATEMSYRRKRAGHLSSKMRFL-SAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVE  282 (345)
T ss_dssp             --CEEEEESSGGG-------HHHHHHHHHHTTCCCSSTHHH-HHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred             --ccccccchhhh-------hhhccccccccccccchhhHH-hhhhHHHHHHhhhhhhccchhhHHHHHHHHHHhcCCcE
Confidence              23333333331       122222222222222222222 2222221222233556666777778888888887 888


Q ss_pred             EecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          203 VYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       203 ~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      +..+..++++++.++    .+....|+++ ||.+.++    +.+++.+||++  .+|+||++++++.|+++
T Consensus       283 ~~~p~~~niv~~~~~----~~~~~~L~~~-gi~v~~~----~~~~~~lR~~~~~~~T~edid~~le~lr~a  344 (345)
T d1v72a1         283 VLGGTEANILFCRLD----SAMIDALLKA-GFGFYHD----RWGPNVVRFVTSFATTAEDVDHLLNQVRLA  344 (345)
T ss_dssp             EESCCCSSEEEEEEC----HHHHHHHHHT-TCBCBCS----SSSTTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred             eccCCCccEEEEEcC----HHHHHHHHHc-CCCcccc----CCCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence            888888999999886    3566777766 9987543    33468999996  46999999999999975

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.61  E-value=9.2e-14  Score=115.03  Aligned_cols=228  Identities=16%  Similarity=0.169  Sum_probs=159.8

Q ss_pred             eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024           24 NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP   96 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~   96 (272)
                      +.+.++++++ ...+|.++      ..+||+|++-...+|--.  +   .+++.++|++.|++++.|-+|. +++.++..
T Consensus       137 ~~~~y~~d~~-~~~ID~d~l~~~a~~~kPklIi~G~S~y~r~~--d---~~~~reIad~vga~l~~D~aH~~GLIa~g~~  210 (405)
T d1kl1a_         137 NFVAYGVDPE-THVIDYDDVREKARLHRPKLIVAAASAYPRII--D---FAKFREIADEVGAYLMVDMAHIAGLVAAGLH  210 (405)
T ss_dssp             EEEEECBCTT-TCSBCHHHHHHHHHHHCCSEEEECCSSCCSCC--C---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSS
T ss_pred             EEEEeccchh-cccccHHHHHHHHHhhCcceEEeccccccccc--C---hHHHHHHHhhhCCEEecchhhHhhhhhhhhc
Confidence            7788889877 56677444      378999999766666433  3   8899999999999999999996 56666654


Q ss_pred             CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHh-cccccH
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLAC-LSSEGL  175 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-l~~~~~  175 (272)
                      +++...   .|  ++.+|.+|++  +|-|.|.+.++++.        .+.+.+...+...+.+.....|+.++ +.+-..
T Consensus       211 ~~P~~~---aD--vvt~tThKtl--rGPrgg~I~~~~~~--------~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~  275 (405)
T d1kl1a_         211 PNPVPY---AH--FVTTTTHKTL--RGPRGGMILCQEQF--------AKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQ  275 (405)
T ss_dssp             CCSTTT---CS--EEEEESSSTT--CCCSCEEEEECHHH--------HHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHS
T ss_pred             CChhhh---hh--heeccccccc--cCCCCceEEecchh--------HHHHHhhhCcccccCcchhHHHHHHHHHHHHhC
Confidence            444333   22  7888999998  55677988888766        56666666555554544444444333 332222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecCC-CChHHHHHHHHHhcCeEee----CCCCCCCCCCCe
Q 036024          176 EAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFPG-RKSWDVFAEILEKTHITTV----PGSGFGPGGEEY  249 (272)
Q Consensus       176 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~----~g~~~~~~~~~~  249 (272)
                      ...++..+++.++++.|.+.|.+.|+.+... -+...+++++.. ..+...+.++|++.||.++    |+..-.+-.++.
T Consensus       276 ~~fk~Ya~qvv~NAkaLa~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SG  355 (405)
T d1kl1a_         276 DDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSG  355 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEECCCTTCSSCTTTCSE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCCceeecCCCccceeeccccccCCcHHHHHHHHHHcCeEEcCCcCCCCCCCCCCCCc
Confidence            4568889999999999999999999999753 356789999952 2344557778889999886    332111223578


Q ss_pred             EEEEc------cCCHHHHHHHHHHHHHhC
Q 036024          250 IRISG------FGHRESILEASRRLEALF  272 (272)
Q Consensus       250 ~R~s~------~~~~~~i~~~l~~l~~~l  272 (272)
                      +|++.      ...++|+.+..+.|.++|
T Consensus       356 iRiGT~a~TtrG~~e~dm~~ia~~I~~~l  384 (405)
T d1kl1a_         356 IRIGTAAVTTRGFGLEEMDEIAAIIGLVL  384 (405)
T ss_dssp             EEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             eeecCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence            99994      226788888888777653

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.60  E-value=1.1e-14  Score=123.09  Aligned_cols=244  Identities=14%  Similarity=0.127  Sum_probs=156.5

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccC-CCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAA   89 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~   89 (272)
                      +......++ ..+.+...+......+ .+.   .++++++++++.+|.||...+   ++++.++|+++++.+++|.+.+.
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~---~~~i~~~~~~~~~~~~vD~~ss~  183 (388)
T d2ch1a1         107 AVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQHDCLLIVDAVASL  183 (388)
T ss_dssp             HHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTB
T ss_pred             chhhhhhhcccccccccccccccchhhhhhhhccCCcceeeeeecccccccccc---hhhhcchhccccceeeeeeeecc
Confidence            344456667 7777777655444333 111   367899999999999999988   88888999999999999999985


Q ss_pred             cccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCc------c----hHHHHHh-----hhhh
Q 036024           90 YVTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGF------P----VINDFNR-----IICT  153 (272)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~------~----~~~~~~~-----~~~~  153 (272)
                      .   ..+..+..+.    ..+++.|..|.++ .+|  +|++..++........      .    .......     ....
T Consensus       184 g---~~pid~~~~~----~d~~~~s~~K~~~gp~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (388)
T d2ch1a1         184 C---GVPFYMDKWE----IDAVYTGAQKVLGAPPG--ITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKR  254 (388)
T ss_dssp             T---TBCCCTTTTT----CCEEECCCC-CCCCCSS--CEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCC
T ss_pred             c---ccccchhccC----ceEEEEccccccCCCCe--EEEEeccHHHHHhhhcccCccccccccchhhhhhhcccccccc
Confidence            2   2223333332    2388889999885 345  6777777655210000      0    0000000     0112


Q ss_pred             ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC----CCceEEEeecC-CCChHHHHHHH
Q 036024          154 CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG----INAPYVWAHFP-GRKSWDVFAEI  228 (272)
Q Consensus       154 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~~~~~i~l~-~~~~~~~~~~l  228 (272)
                      +..+++.....++...+............++.++.....+..+...+.....+    .....+.+.++ +.+..++...|
T Consensus       255 ~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~~~~p~g~~~~~l~~~l  334 (388)
T d2ch1a1         255 YHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQYA  334 (388)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCCHHHHHHHH
T ss_pred             cCccchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhcccccccCCHHHhCCeEEEEECCCCCCHHHHHHHH
Confidence            34456666666666666543334445566666666666777776655444321    12346678886 66778888888


Q ss_pred             HHhcCeEeeCCCCCCCCCCCeEEEE-c--cCCHHHHHHHHHHHHHhC
Q 036024          229 LEKTHITTVPGSGFGPGGEEYIRIS-G--FGHRESILEASRRLEALF  272 (272)
Q Consensus       229 l~~~gi~v~~g~~~~~~~~~~~R~s-~--~~~~~~i~~~l~~l~~~l  272 (272)
                      ++++||.+.+|....  ..+.+|+| +  .+++|+++.++++|+++|
T Consensus       335 ~~~~gI~v~~G~~~~--~~~~~RIs~~g~~~t~edI~~ll~alke~L  379 (388)
T d2ch1a1         335 MNNFSLEVQGGLGPT--FGKAWRVGIMGECSTVQKIQFYLYGFKESL  379 (388)
T ss_dssp             HHHHCBCCBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEeCCCccc--cCCEEEEcCCcCCCCHHHHHHHHHHHHHHH
Confidence            898999999887532  24689999 4  457899999999999875

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=2.2e-14  Score=122.59  Aligned_cols=207  Identities=13%  Similarity=0.071  Sum_probs=133.5

Q ss_pred             CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.++++-.-+...|. ..+++.++.|.++|+++|+++|.||++.++...+.......+...+|.    -+++|.+| .|
T Consensus       198 ~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~a~~~~gv~PDi----~~~gK~l~-gG  272 (425)
T d1sffa_         198 DIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDL----TTFAKSIA-GG  272 (425)
T ss_dssp             GEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSE----EEECGGGG-TS
T ss_pred             ceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhhHHHhcCCCccc----eecccccC-CC
Confidence            4445555433545565 467888999999999999999999999986555544433344444552    25899998 78


Q ss_pred             cceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH----HHhC
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDT----LASL  199 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~----L~~~  199 (272)
                      +.+|.++++++..        +.+.......+++.++++..|+.+.|+....   +...++.++..+++++.    +++.
T Consensus       273 ~P~~av~~~~~i~--------~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~---~~~~~~~~~~g~~l~~~l~~~~~~~  341 (425)
T d1sffa_         273 FPLAGVTGRAEVM--------DAVAPGGLGGTYAGNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDGLLAIAEKH  341 (425)
T ss_dssp             SCCEEEEEEHHHH--------TTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             cceEEEEEcHHHH--------HhhCCCCCCCCCCcCHHHHHHHHHHHHHHHH---hhhhhhhhhhhhhhhhhhhhhHhhC
Confidence            9999999999873        3333334556667889999999998884333   22334444444444444    4444


Q ss_pred             CCeEecCCCceEEEeecC-----CCC----hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHH
Q 036024          200 GIKVYGGINAPYVWAHFP-----GRK----SWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRL  268 (272)
Q Consensus       200 g~~~~~~~~~~~~~i~l~-----~~~----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l  268 (272)
                      ++...-...|.+..+.+.     ...    ...+..+++++ ||.+.++...    .+.+|++  +..+++|++++++++
T Consensus       342 ~~v~~vrg~Gl~~~i~f~~~~~~~~~~~~~~~~~~~~l~~~-Gvl~~~~g~~----~n~i~~~PpL~it~~eid~~l~~l  416 (425)
T d1sffa_         342 PEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDK-GLILLSCGPY----YNVLRILVPLTIEDAQIRQGLEII  416 (425)
T ss_dssp             TTEEEEEEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHT-TEECEEESTT----SCEEEECCCTTCCHHHHHHHHHHH
T ss_pred             CceEEEEccccEEEEEEeccCccCCccHHHHHHHHHHHHHC-CCEEeccCCC----CCEEEEECCCCCCHHHHHHHHHHH
Confidence            432211123455555552     111    23455566666 9998775322    4578998  456999999999999


Q ss_pred             HHhC
Q 036024          269 EALF  272 (272)
Q Consensus       269 ~~~l  272 (272)
                      +++|
T Consensus       417 ~~al  420 (425)
T d1sffa_         417 SQCF  420 (425)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.59  E-value=1.6e-14  Score=124.04  Aligned_cols=237  Identities=16%  Similarity=0.149  Sum_probs=142.7

Q ss_pred             chHHhcccc-eeEEeecCC-CCCcccCCCC----------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024           15 LEDEVGKYC-NIEYLECGP-GNNFFPDLKG----------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII   82 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~-~~~~~~dl~~----------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi   82 (272)
                      ....+...| +.+.++... +..+..|++.          ..++.++++++|++++|..-+   +++|+++|+++|++++
T Consensus       169 ~~k~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~---l~~i~~~~~~~~~~l~  245 (434)
T d2z67a1         169 PIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHI  245 (434)
T ss_dssp             HHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEE
T ss_pred             HHHHHHHhCCcceEEEeecCCCccCCCHHHHHHHHHhhhhcCCceEEEeccCcCCCccccC---HHHHHHHHHHhCCeEE
Confidence            555666677 776666432 2234556443          145677888899999999866   9999999999999999


Q ss_pred             EcccCCccccC-CC-CCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcch
Q 036024           83 FDSAYAAYVTD-GC-PRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASN  160 (272)
Q Consensus        83 ~D~~~~~~~~~-~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (272)
                      +|++|+..... +. +......    ...+++.|++|.++.| ...|++...++..       +..+...........+.
T Consensus       246 vD~a~g~~~~~~~~~~~~~~~~----~~D~~~~s~hK~l~~~-~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~  313 (434)
T d2z67a1         246 INGAYAIQNNYYLEKLKKAFKY----RVDAVVSSSDKNLLTP-IGGGLVYSTDAEF-------IKEISLSYPGRASATPV  313 (434)
T ss_dssp             EECTTTTTCHHHHHHHHHHHTS----CCSEEEEEHHHHHCCC-SSCEEEEESCHHH-------HHHHHTTSCSCBCSHHH
T ss_pred             EeccchhhhhhccccccccccC----CcceEEEcCccccccC-CCccccccCcHHH-------HHHHHhhcccccccchH
Confidence            99999743211 10 1111122    1227888999988743 3356666665442       44444333323322333


Q ss_pred             HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEe
Q 036024          161 IAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----GIKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITT  236 (272)
Q Consensus       161 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v  236 (272)
                      ....++...+   +.+..++..++..++++++++.|+++    |..+........+.+.+. .+..++...|.++ ||..
T Consensus       314 ~~~~a~l~~~---~~~g~~~~~~~~~~~a~~l~~~L~~l~~~~g~~ll~~~~~~~~~~~~~-~~~~~l~~~L~~~-gI~g  388 (434)
T d2z67a1         314 VNTLVSLLSM---GSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVESPIASCISVN-SDPVEIAAKLYNL-RVTG  388 (434)
T ss_dssp             HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCCCSSEEEEECS-SCHHHHHHHHHHT-TEES
T ss_pred             HHHHHHHHHH---HHhcchhHHHHHHHHHHHHHHHHHHhhhhcCceecCCCCCceeeeecC-CCHHHHHHHHHHc-CCee
Confidence            3333333333   33445667777777788887777764    666665444433434443 3566766766655 8854


Q ss_pred             eCC----CCC-----CCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          237 VPG----SGF-----GPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       237 ~~g----~~~-----~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      ..+    ..+     .....+++|+++  ..|+||+++++++|+++
T Consensus       389 ~~v~~~l~~~g~~~~~~~~~~~l~~~~s~~~T~edID~~i~~L~kI  434 (434)
T d2z67a1         389 PRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKI  434 (434)
T ss_dssp             CEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred             eehhhhccccCeeeecccCCCeEEEecCCCCCHHHHHHHHHHHhcC
Confidence            211    111     112257899885  56999999999999874

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.57  E-value=1.4e-13  Score=116.71  Aligned_cols=210  Identities=12%  Similarity=0.112  Sum_probs=129.5

Q ss_pred             CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           43 TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        43 ~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      .++++++.+++.+|.||..+|   +++|+++|+++++.+++|.++....   .+..+..+..    .++..|.+|.++.+
T Consensus       162 ~~~T~lV~i~~v~~~tG~~~p---v~~i~~~~~~~~~~~~vD~~q~~g~---~~~~~~~~~~----d~~~~s~~K~~~~~  231 (404)
T d1qz9a_         162 DQDTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGA---VPVDLHQAGA----DYAIGCTYKYLNGG  231 (404)
T ss_dssp             STTEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT---SCCCHHHHTC----SEEEECSSSTTCCC
T ss_pred             CCCceEEEEecccccccceec---HHHHhccccccccceeEEeeccccc---cccccccccc----eEEEEechhhcccC
Confidence            389999999999999999998   9999999999999999999998522   2334444432    27888999987533


Q ss_pred             ccceeEEEecccccccCCcchHHHHH----------------hhhhhccCCcchHHHH---HHHHhcccccHHHHHHHHH
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFN----------------RIICTCFNGASNIAQA---GGLACLSSEGLEAVHSVVD  183 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~---a~~~~l~~~~~~~~~~~~~  183 (272)
                      ..-.|++..++...... +.....+.                ........+.+.....   +....+...+....++...
T Consensus       232 ~g~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  310 (404)
T d1qz9a_         232 PGSQAFVWVSPQLCDLV-PQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSL  310 (404)
T ss_dssp             TTCCCEEEECTTTTTTS-CCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred             CceEEEEEechhhhhhC-CccccccCCccccccccccccccccchhhhhhhccchhHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            33357777766653210 00000000                0011112223333333   3333333444444444444


Q ss_pred             HHHHHHHHHHHHHHh-CCCeEecCCC----ceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc---c
Q 036024          184 YYKENTKILIDTLAS-LGIKVYGGIN----APYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG---F  255 (272)
Q Consensus       184 ~~~~~~~~l~~~L~~-~g~~~~~~~~----~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~---~  255 (272)
                      ........+.+.+.. .|+++.+|..    +.++.+.++  +..++...| .+.||.+..   .   .++.+|+|+   +
T Consensus       311 ~~~~~~~~l~~~~~~~~~~~i~~p~~~~~r~~~vsf~~~--~~~~v~~~L-~~~gi~~~~---r---~~~~lRiS~~h~y  381 (404)
T d1qz9a_         311 ALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP--EGYAVIQAL-IDRGVIGDY---R---EPRIMRFGFTPLY  381 (404)
T ss_dssp             HHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECT--THHHHHHHH-HTTTEECEE---E---TTTEEEEECCTTT
T ss_pred             HhHHHHHHHHHhhccCCCEEEECCCCccceeeEEEEecC--CHHHHHHHH-HHCCCEEee---c---CCCeEEEECCCCC
Confidence            444444444444444 4888877543    456677776  455666665 455997532   1   146899995   4


Q ss_pred             CCHHHHHHHHHHHHHhC
Q 036024          256 GHRESILEASRRLEALF  272 (272)
Q Consensus       256 ~~~~~i~~~l~~l~~~l  272 (272)
                      +|.+|++++++.|+++|
T Consensus       382 nt~~did~~~~~L~~vl  398 (404)
T d1qz9a_         382 TTFTEVWDAVQILGEIL  398 (404)
T ss_dssp             CCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHH
Confidence            79999999999999864

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=3.4e-13  Score=112.08  Aligned_cols=229  Identities=14%  Similarity=0.099  Sum_probs=153.3

Q ss_pred             eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024           24 NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP   96 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~   96 (272)
                      +.++++++.+ +. +|.++      ..+||+|++-...+|-  .++   .+++.++|++.|+++++|.+|. +++.++..
T Consensus       140 ~~~~y~~d~~-~~-IDyd~l~~~a~~~kPklIi~G~S~y~r--~~d---~~~~reiad~vga~l~~D~aH~~GLIa~g~~  212 (416)
T d1dfoa_         140 NIVPYGIDAT-GH-IDYADLEKQAKEHKPKMIIGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLVAAGVY  212 (416)
T ss_dssp             EEEEECBCSS-SS-BCHHHHHHHHHHHCCSEEEEECSSCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSS
T ss_pred             EEEecccCCc-cC-ccHHHHHHHHHHhccceEEeccccccc--ccC---HHHHHHHHHhcCceEEcchhhhhcceecccc
Confidence            6677887754 33 66443      3789999997665553  344   8899999999999999999997 55555544


Q ss_pred             CCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHH-HHhcccccH
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGG-LACLSSEGL  175 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~  175 (272)
                      +++....   |  ++.+|.+|++  +|-|.|.+.++...-     .+.+.+.+...+...+.+.....|+ +..+.+-..
T Consensus       213 ~sP~~~a---D--vvt~tThKtl--rGPrggiI~~~~~~~-----~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~  280 (416)
T d1dfoa_         213 PNPVPHA---H--VVTTTTHKTL--AGPRGGLILAKGGSE-----ELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAME  280 (416)
T ss_dssp             CCCTTTS---S--EEEEESSSTT--CCCSCEEEEESSCCH-----HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTS
T ss_pred             CCccccc---c--eeeeehhhcc--cCCCceEEEeccchH-----hHHHHHHhhhCcccccCccHHHHHHHHHHHHHHcC
Confidence            4433332   2  8899999999  556778888864320     0145555555444443444444333 333333233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCC----CCCCCCe
Q 036024          176 EAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGF----GPGGEEY  249 (272)
Q Consensus       176 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~----~~~~~~~  249 (272)
                      ...++..+++.++++.|.+.|.+.|+.+.. ..+...+++++.+ ..+...+..+|++.||.++--.-+    .+-.++.
T Consensus       281 ~~fk~Y~~qvv~NA~~La~~L~~~G~~iv~ggTdnHlvlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SG  360 (416)
T d1dfoa_         281 PEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSG  360 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCCceeEEEecccCCCHHHHHHHHHHcCeEEeCCcCCCCCCCCCCCCc
Confidence            455888999999999999999999999975 3456788899963 234566777889999998622211    1223578


Q ss_pred             EEEEc------cCCHHHHHHHHHHHHHh
Q 036024          250 IRISG------FGHRESILEASRRLEAL  271 (272)
Q Consensus       250 ~R~s~------~~~~~~i~~~l~~l~~~  271 (272)
                      +|++.      ...++|+.+..+.|.++
T Consensus       361 iRiGT~a~TtrG~~e~d~~~iA~~I~~~  388 (416)
T d1dfoa_         361 IRVGTPAITRRGFKEAEAKELAGWMCDV  388 (416)
T ss_dssp             EEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             eEeCCHHHHhCCCCHHHHHHHHHHHHHH
Confidence            99994      22678888887777665

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.56  E-value=5.6e-14  Score=118.47  Aligned_cols=204  Identities=17%  Similarity=0.194  Sum_probs=142.1

Q ss_pred             CCceEEEEecC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCSP-NNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++.++++ .| +...|. ..+++.+++|.++|++||+++|.||++.++...+.......+...+|.+    +++|.+| 
T Consensus       176 ~~iAavi~-EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~PDi~----~~gK~l~-  249 (387)
T d1vefa1         176 EETAAVIL-EPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL----TLAKALG-  249 (387)
T ss_dssp             TTEEEEEE-CSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE----EECGGGG-
T ss_pred             CCeEEEEE-ECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCCcccccCCcCCcee----eecccCC-
Confidence            45556555 45 444565 4678889999999999999999999999875555444444444445532    4799998 


Q ss_pred             CccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLG-  200 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-  200 (272)
                      .|..++.++..++.        ...+.......+++.++++..|+.+.++....   ....++.++..+++++.|+++. 
T Consensus       250 gG~~~~~~~~~~~~--------~~~~~~~~~g~T~~gnPla~aaa~a~L~~l~~---~~~~~~v~~~g~~l~~~L~~l~~  318 (387)
T d1vefa1         250 GGVPLGVAVMREEV--------ARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPS  318 (387)
T ss_dssp             TTSSCEEEEEEHHH--------HHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCC
T ss_pred             CCccccccccceee--------eeccccCCccccCCCCcchhhhcccchhhccc---ccccchHhhhhHHHHHHHHhcCC
Confidence            88888888888877        44444444556667889999988888874332   4566788888888999998762 


Q ss_pred             --CeEecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHHhC
Q 036024          201 --IKVYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEALF  272 (272)
Q Consensus       201 --~~~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~~l  272 (272)
                        +.-.. ..|.+..+.+.......+ ..++.+.|+.+.+..      .+.+|++  +..|++++++++++++++|
T Consensus       319 ~~v~~vr-g~Gl~~~ie~~~~~~~~~-~~~~~~~g~l~~~~g------~~~ir~~Ppl~it~~~ld~~~~~i~~aL  386 (387)
T d1vefa1         319 PKIREVR-GMGLMVGLELKEKAAPYI-ARLEKEHRVLALQAG------PTVIRFLPPLVIEKEDLERVVEAVRAVL  386 (387)
T ss_dssp             TTEEEEE-EETTEEEEEESSCSHHHH-HHHHHHHCEECEESS------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CceEEEe-ecceEEEEEEeCCchHHH-HHHHHHCCCeEEecC------CCEEEEECCccCCHHHHHHHHHHHHHHh
Confidence              22122 135666778875444444 444445588776532      4678988  4569999999999999875

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=1.7e-13  Score=117.05  Aligned_cols=205  Identities=10%  Similarity=0.001  Sum_probs=141.7

Q ss_pred             CCceEEEEecC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCC
Q 036024           44 SRTDIIFFCSP-NNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGF  121 (272)
Q Consensus        44 ~~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  121 (272)
                      +++.++++.-. ++..|. ..+++.+++|.++|++||+++|.||++.++...+.......+...+|.+    +++|.++-
T Consensus       203 ~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~~~~~~~v~PDi~----~~gK~l~g  278 (429)
T d1s0aa_         203 HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL----CLGKALTG  278 (429)
T ss_dssp             TTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE----EECGGGGT
T ss_pred             CccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhccccccccccccccccceeccccc----cccccccc
Confidence            45555655532 455555 5688999999999999999999999999876555444444444455533    47999974


Q ss_pred             CccceeEEEecccccccCCcchHHHHHh-----hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH
Q 036024          122 TGVRLGWTVVPEELLFSSGFPVINDFNR-----IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTL  196 (272)
Q Consensus       122 ~g~r~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L  196 (272)
                      .+..+|.+++.++.        .+.+..     +....+++.++++..|+.+.++....   ++..++.++..+++++.|
T Consensus       279 G~~p~~av~~~~~i--------~~~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~i~~---~~~~~~~~~~g~~l~~~L  347 (429)
T d1s0aa_         279 GTMTLSATLTTREV--------AETISNGEAGCFMHGPTFMGNPLACAAANASLAILES---GDWQQQVADIEVQLREQL  347 (429)
T ss_dssp             SSSCCEEEEECHHH--------HHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhHHHH--------HhccCCCCCcceeecCCCCCCcccchhhhcccccccc---ccccchhhHHHHHHHHHH
Confidence            45889999999887        444432     22345666888999888888873322   445677777778888888


Q ss_pred             HhC----CCeEecCCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHH
Q 036024          197 ASL----GIKVYGGINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLE  269 (272)
Q Consensus       197 ~~~----g~~~~~~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~  269 (272)
                      +++    .+.-.. ..|.+..+++.. .....+...++++ |+.+.+.       .+.+|++  +..|++|+++++++|+
T Consensus       348 ~~l~~~~~v~~vr-g~Gl~~~~e~~~~~~~~~~~~~~~~~-Gl~~~~~-------g~~i~~~Ppl~it~~eid~~~~~l~  418 (429)
T d1s0aa_         348 APARDAEMVADVR-VLGAIGVVETTHPVNMAALQKFFVEQ-GVWIRPF-------GKLIYLMPPYIILPQQLQRLTAAVN  418 (429)
T ss_dssp             GGGGGCTTEEEEE-EETTEEEEEESSCBCHHHHHHHHHHT-TEECCCB-------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             HHhccCCceEEEe-ecccEEEEEecCcccHHHHHHHHHHC-CcEEEec-------CCEEEEeCCcCCCHHHHHHHHHHHH
Confidence            665    222122 135566677763 3445555666555 9998653       2579998  5669999999999999


Q ss_pred             HhC
Q 036024          270 ALF  272 (272)
Q Consensus       270 ~~l  272 (272)
                      ++|
T Consensus       419 ~al  421 (429)
T d1s0aa_         419 RAV  421 (429)
T ss_dssp             HHT
T ss_pred             HHH
Confidence            875

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.51  E-value=1.3e-13  Score=116.20  Aligned_cols=241  Identities=11%  Similarity=0.050  Sum_probs=147.7

Q ss_pred             chHHhcccc-eeEEeecCCC-CCcccC-CCC---CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHc--CCEEEEccc
Q 036024           15 LEDEVGKYC-NIEYLECGPG-NNFFPD-LKG---TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNN--GSIIIFDSA   86 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~-~~~~~d-l~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~--~~~vi~D~~   86 (272)
                      +....+..| ....+...+. .....+ +++   .++++++++++.+|.||...+   ++.+.+.|+++  ++++++|.+
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~---~~~~~~~~~~~~~~~~~~vDa~  175 (382)
T d2bkwa1          99 FADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSD---LKAISQAIKQTSPETFFVVDAV  175 (382)
T ss_dssp             HHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTSEEEEECT
T ss_pred             hhhhccccccccccccccCCCCccchhHHHHHhhhccchheeeeecccccccccc---chhhhhhccccccceeeeeecc
Confidence            344455666 5555544333 122222 111   267899999999999999988   56666666554  699999999


Q ss_pred             CCccccCCCCCCccccCCCCCceEEEecCcccc-CCCccceeEEEecccccccCCcchH---------------HH---H
Q 036024           87 YAAYVTDGCPRSIYEIPGAREVAIEISSFSKFS-GFTGVRLGWTVVPEELLFSSGFPVI---------------ND---F  147 (272)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~r~G~~~~~~~~~~~~~~~~~---------------~~---~  147 (272)
                      ++.   +..+..+..+..+    +++.|.+|.+ |.+|  +|+++.+++.+....+...               ..   .
T Consensus       176 qs~---g~~pid~~~~giD----~~~~s~~K~l~gP~G--~g~l~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (382)
T d2bkwa1         176 CSI---GCEEFEFDEWGVD----FALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENY  246 (382)
T ss_dssp             TTT---TTSCCCTTTTTCS----EEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHH
T ss_pred             ccc---ccccccccccCee----EEeecccccCcCCCc--hhhhhccHHHHhhhhhcccCCCcccchhhhhhhhhhhhcc
Confidence            975   2223344433222    8899999988 6677  7999998877432111100               00   1


Q ss_pred             HhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecC--C---CceEEEeecCCCCh
Q 036024          148 NRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGG--I---NAPYVWAHFPGRKS  221 (272)
Q Consensus       148 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~---~~~~~~i~l~~~~~  221 (272)
                      ......+..+++....+++.++++....+..+...++.++.++++++.+.+. ++....+  .   ...++.+.++  ++
T Consensus       247 ~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~s~~v~~~~~~--~~  324 (382)
T d2bkwa1         247 EAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVA--DP  324 (382)
T ss_dssp             HTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECS--CH
T ss_pred             cccccccccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhcccccccccCchhccCCcEEEEcCC--CH
Confidence            1111234556777777878887775444556778888888999999999864 4444321  1   1233455555  45


Q ss_pred             HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE-c--cCCHHH---HHHHHHHHHHh
Q 036024          222 WDVFAEILEKTHITTVPGSGFGPGGEEYIRIS-G--FGHRES---ILEASRRLEAL  271 (272)
Q Consensus       222 ~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s-~--~~~~~~---i~~~l~~l~~~  271 (272)
                      .++.. +++++||.+.+|... ..+.+.+|++ +  ..++++   +.++++.+++.
T Consensus       325 ~~~~~-~L~~~gi~i~~G~~~-~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~~~  378 (382)
T d2bkwa1         325 PDVIA-FLKSHGVVIAGGIHK-DIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLA  378 (382)
T ss_dssp             HHHHH-HHHHTTEECBCCCCT-TTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHCCeEEECCCCh-hhcCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHH
Confidence            56544 566779999887542 2235679999 4  234555   55555555544

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.50  E-value=1.9e-13  Score=111.47  Aligned_cols=207  Identities=13%  Similarity=0.083  Sum_probs=126.4

Q ss_pred             CceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCC--CCccccCCCCCceEEEecCccccCCC
Q 036024           45 RTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP--RSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      ....++++.+.|++|.+.+.+++..+.+.|+++++.+++|+++.........  .......  ....+...+..|..+.+
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  207 (340)
T d1svva_         130 VIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIA--RLTDMFYIGATKAGGMF  207 (340)
T ss_dssp             CEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHH--HHCSEEEEECTTTTCSS
T ss_pred             CcceeeeecccccccccccHHHhhhhhcccccccceeeeeccceeeeeccccccccccccc--ccceeeecCCccccccc
Confidence            3445555555556677788899999999999999999999999754433221  1111111  11224444555544333


Q ss_pred             ccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK  202 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~  202 (272)
                        +.++.........      .....................++...+.....   ....++..+++..+.+.|+..|+.
T Consensus       208 --~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~g~~  276 (340)
T d1svva_         208 --GEALIILNDALKP------NARHLIKQRGALMAKGWLLGIQFEVLMKDNLF---FELGAHSNKMAAILKAGLEACGIR  276 (340)
T ss_dssp             --CEEEEECSGGGCT------THHHHHHHTTCCCTTTHHHHHHHHHHTSTTHH---HHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             --cccccccchhhhh------hhhhhcccccCccchhhHHHHHHHHHhhhhHH---HHHHHHHHHHHhhhHHHHhcCCCe
Confidence              3455454444421      11111112222222333333444444443332   556778888999999999999999


Q ss_pred             EecCCCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          203 VYGGINAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       203 ~~~~~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      +..|..++++++.+++    +...+++++..+...+.   .+.+++.+|+++  .+|++||++++++|+++
T Consensus       277 ~~~p~~~~~v~~~~~~----~~~~~l~~~~~~~~~~~---~~~~~~~vR~s~~~~~t~edid~~l~~l~~l  340 (340)
T d1svva_         277 LAWPSASNQLFPILEN----TMIAELNNDFDMYTVEP---LKDGTCIMRLCTSWATEEKECHRFVEVLKRL  340 (340)
T ss_dssp             BSSCCSSSEECBEEEH----HHHHHHTTTEECEEEEE---ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC
T ss_pred             eecCCCceEEEEeCCH----HHHHHHHHhhhhhcccc---cCCCCcEEEEECCCCCCHHHHHHHHHHHhcC
Confidence            9888788999888853    55666666632222222   244578999975  56999999999999874

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.47  E-value=6.8e-12  Score=105.77  Aligned_cols=234  Identities=15%  Similarity=0.146  Sum_probs=157.3

Q ss_pred             eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024           24 NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP   96 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~   96 (272)
                      +.+.++++++ ...+|.++      ..+||+|++-...+|-=  ++   .+++.++|++.|+++++|-+|. +++.++..
T Consensus       154 ~~~~y~v~~~-~~~IDyd~l~~~a~~~kPklIi~G~S~y~r~--~d---~~~~reIad~vga~l~~D~aH~aGLIA~g~~  227 (470)
T d1rv3a_         154 ESMAYKVNPD-TGYIDYDRLEENARLFHPKLIIAGTSCYSRN--LD---YGRLRKIADENGAYLMADMAHISGLVVAGVV  227 (470)
T ss_dssp             EEEEECBCTT-TCSBCHHHHHHHHHHHCCSEEEECCSSCCSC--CC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSS
T ss_pred             EeeEEEEecc-cCcccHHHHHHHHHhhCcceEeechhhcccc--CC---HHHHHHHHhccCCeEEecchhhhhhcccccc
Confidence            6788899877 44566443      26899999976666643  33   8899999999999999999996 55555554


Q ss_pred             CCccccCCCCCceEEEecCccccCCCccceeEEEeccccc-------ccCCcchHHHHHhhhhhccCCcchHHHHHHHH-
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL-------FSSGFPVINDFNRIICTCFNGASNIAQAGGLA-  168 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-  168 (272)
                      ++.....   |  ++.+|.+|++  +|-|.|.+...++..       ......+.+.+.+...+...+.+.....|+.+ 
T Consensus       228 ~sPl~~a---D--vvt~tTHKtl--rGPrgGiI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Av  300 (470)
T d1rv3a_         228 PSPFEHC---H--VVTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAV  300 (470)
T ss_dssp             CCGGGTC---S--EEEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHH
T ss_pred             CChhhee---e--eeeeehhhhc--cCCcceEEEEccccccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHH
Confidence            4444332   2  8899999999  566778888776421       01111235566666655444444444444443 


Q ss_pred             hcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-CCCceEEEeecCC-CChHHHHHHHHHhcCeEee----CCCCC
Q 036024          169 CLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYG-GINAPYVWAHFPG-RKSWDVFAEILEKTHITTV----PGSGF  242 (272)
Q Consensus       169 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~----~g~~~  242 (272)
                      ++.+-.....++..+++.++++.|.+.|.+.|+.+.. ......+++++.. ..+...+.++|++.||.++    |+.. 
T Consensus       301 a~~ea~~~~fk~Ya~qvv~NAk~La~~L~~~G~~v~~ggTdnHlvlvdl~~~g~~g~~ae~~Le~~gI~~Nkn~iP~D~-  379 (470)
T d1rv3a_         301 ALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDK-  379 (470)
T ss_dssp             HHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCS-
T ss_pred             HHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCceeccCCCCCceEEEeecccCCcHHHHHHHHHHcCcEECCCcCCCCC-
Confidence            3332223456889999999999999999999999864 3446778888862 2244567888899999885    3331 


Q ss_pred             CCCCCCeEEEEc------cCCHHHHHHHHHHHHHh
Q 036024          243 GPGGEEYIRISG------FGHRESILEASRRLEAL  271 (272)
Q Consensus       243 ~~~~~~~~R~s~------~~~~~~i~~~l~~l~~~  271 (272)
                      .+..++.+||+.      ...++|+.+..+.|.++
T Consensus       380 ~~~~~sGiRiGT~alTtrG~~e~dm~~iA~~I~~~  414 (470)
T d1rv3a_         380 SALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRG  414 (470)
T ss_dssp             CTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCeeEecCHHHHhCCCCHHHHHHHHHHHHHH
Confidence            223357899994      22677877777766654

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.47  E-value=6.7e-13  Score=113.28  Aligned_cols=204  Identities=15%  Similarity=0.122  Sum_probs=124.8

Q ss_pred             CCceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCC
Q 036024           44 SRTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFT  122 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  122 (272)
                      .++.++++-.-+.-.|. ..+++.+++|.++|++||+++|.||++.++. .+........+..+|.+    +++|.+| .
T Consensus       198 ~~iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r-~g~~~~~~~~gi~PDi~----~~gK~lg-g  271 (427)
T d2gsaa_         198 GEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFR-IAYGGVQEKFGVTPDLT----TLGKIIG-G  271 (427)
T ss_dssp             TTEEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTT-TBTTCHHHHTTCCCSEE----EECGGGG-T
T ss_pred             CCeEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccce-ecccchHHhcCCCHHHH----hhhhccC-C
Confidence            34555555433444465 4566779999999999999999999999763 34333333333345532    4789998 7


Q ss_pred             ccceeEEEecccccccCCcchHHHHH---hhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHh-
Q 036024          123 GVRLGWTVVPEELLFSSGFPVINDFN---RIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLAS-  198 (272)
Q Consensus       123 g~r~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-  198 (272)
                      |..+|.++++++..        +.+.   .....++++.++++..|+.+.++....   +...++++++.+++++.|++ 
T Consensus       272 G~p~~a~~~~~~i~--------~~~~~~~~~~~~~T~~gnpla~AAala~Le~i~~---~~l~~~~~~~g~~l~~~L~~l  340 (427)
T d2gsaa_         272 GLPVGAYGGKREIM--------QLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLAI  340 (427)
T ss_dssp             TSCCEEEEECHHHH--------TTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHH
T ss_pred             CcceeeeeehHHHH--------HHhcccCCCcCCCCCCCCchhhHHHHHhhHHhhh---hhHHhhhhHHHHHHHHHHHHH
Confidence            88999999888873        2222   223345566888988888888873332   22344555555555555543 


Q ss_pred             ---CCC--eEecCCCceEEEeec--CC-------CCh----HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEccCCHHH
Q 036024          199 ---LGI--KVYGGINAPYVWAHF--PG-------RKS----WDVFAEILEKTHITTVPGSGFGPGGEEYIRISGFGHRES  260 (272)
Q Consensus       199 ---~g~--~~~~~~~~~~~~i~l--~~-------~~~----~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~~~~~~  260 (272)
                         .++  .+.+. ++++.....  +.       ..+    ..+...++++ ||.+.|+.      ...+-+++..|++|
T Consensus       341 ~~~~~~~~~v~~~-ggm~~i~~~~~~v~~~~~~~~~d~~~~~~~~~~ll~~-Gv~l~p~~------~~~~~~~l~~Te~d  412 (427)
T d2gsaa_         341 AQETGHAACGGQV-SGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQ-GIYLAPSQ------FEAGFTSLAHTEED  412 (427)
T ss_dssp             HHHTTCCCEEEEE-TTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSST------TSCEECCTTCCHHH
T ss_pred             HhhcCCCcEEccc-CCeEEEEEeccCCCCHHHhhcccHHHHHHHHHHHHHC-CEEECCCC------CcceeCCCCCCHHH
Confidence               343  33332 344322211  11       011    2244456666 99997753      12223567779999


Q ss_pred             HHHHHHHHHHhC
Q 036024          261 ILEASRRLEALF  272 (272)
Q Consensus       261 i~~~l~~l~~~l  272 (272)
                      +++++++|+++|
T Consensus       413 Id~~l~al~~al  424 (427)
T d2gsaa_         413 IDATLAAARTVM  424 (427)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999999864

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.47  E-value=2.6e-12  Score=106.92  Aligned_cols=158  Identities=18%  Similarity=0.249  Sum_probs=107.2

Q ss_pred             HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC   95 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~   95 (272)
                      ..+.+.| ++..+.......+...+  .+++|+|++-+|.|||..+.+   +++|+++|+++|+++|+|+.+.....   
T Consensus       106 ~~~~~~gi~~~~~d~~~~~~~~~ai--~~~t~li~~EtpsNP~l~v~D---i~~i~~iA~~~g~~~vVDnT~atP~~---  177 (380)
T d1ibja_         106 QVVPRSGVVVKRVNTTKLDEVAAAI--GPQTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPVL---  177 (380)
T ss_dssp             HTSGGGTCEEEEECTTSHHHHHHHC--CSSEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTT---
T ss_pred             hhhccccccccccCcchHHHHHHHh--ccCccEEEecccccccccccc---HHHHHHHHHHcCCeEEeecccccccc---
Confidence            4456677 77766654332222212  379999999999999999987   99999999999999999999874211   


Q ss_pred             CCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhccccc
Q 036024           96 PRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEG  174 (272)
Q Consensus        96 ~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~  174 (272)
                      ..++ .+..  |  +++.|.+|.++ ....-.|.++.+++..       ...+...........++.....+.+-     
T Consensus       178 ~~Pl-~~Ga--D--iVvhS~TKyi~GhsDv~~G~v~~~~~~~-------~~~~~~~~~~~G~~l~p~~a~ll~rg-----  240 (380)
T d1ibja_         178 SRPL-ELGA--D--IVMHSATKFIAGHSDVMAGVLAVKGEKL-------AKEVYFLQNSEGSGLAPFDCWLCLRG-----  240 (380)
T ss_dssp             CCGG-GTTC--S--EEEEETTTTTTCSSCCCCEEEEECSHHH-------HHHHHHHHHHTTCBCCHHHHHHHHHH-----
T ss_pred             cccc-ccCC--C--EEEecccceeccccCccccccccchhhH-------HHHHHhhccccCCcCCHHHHHHHHhc-----
Confidence            1122 2221  2  99999999885 3444567777765542       44555555444444555544433333     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          175 LEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       175 ~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      .+.+..+.++..+++..+.+.|+++
T Consensus       241 l~Tl~lRm~~~~~nA~~lA~~L~~h  265 (380)
T d1ibja_         241 IKTMALRIEKQQENARKIAMYLSSH  265 (380)
T ss_dssp             HTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHhC
Confidence            3455778889999999999999987

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.46  E-value=4.6e-13  Score=115.07  Aligned_cols=240  Identities=13%  Similarity=0.052  Sum_probs=138.0

Q ss_pred             chHHhcccc-eeEEeecCC-CCCcccCCCCC---------CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024           15 LEDEVGKYC-NIEYLECGP-GNNFFPDLKGT---------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF   83 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~-~~~~~~dl~~~---------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~   83 (272)
                      +...+...| +.+.++... +..+..|++.+         +++.++++++|+|++|.+-+   +++|+++|+++|+++++
T Consensus       153 ~~~a~~~~g~~~~~v~~~~~~~~~~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~~~~~~~~~l~v  229 (445)
T d3bc8a1         153 CFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVV  229 (445)
T ss_dssp             HHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEE
T ss_pred             HHHHHHHcCCeeEEEEeeccCcccccCHHHHHHHHHhccccCeEEEEEeCCCCCCeeehh---HHHHHHHHHHhCCcEEE
Confidence            556677788 777775432 33566674431         45778888899999999866   99999999999999999


Q ss_pred             cccCCccccCCCCCC--ccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchH
Q 036024           84 DSAYAAYVTDGCPRS--IYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNI  161 (272)
Q Consensus        84 D~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (272)
                      |++|+..........  .....   +.-++..|.+|.++.| ...|+++..+...       ...+...........+..
T Consensus       230 D~a~~~~~~~~~~~~~~~~~~~---~vd~~~~s~hK~~~~p-~g~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~  298 (445)
T d3bc8a1         230 NNAYGLQSSKCMHLIQQGARVG---RIDAFVQSLDKNFMVP-VGGAIIAGFNEPF-------IQDISKMYPGRASASPSL  298 (445)
T ss_dssp             ECTTTTTCHHHHHHHHHHHHHS---CCCEEEEEHHHHHSCC-SSCEEEEESCHHH-------HHHHHHHSCSCBCSHHHH
T ss_pred             EccchhhhhhccccchhccCcC---CcceEEecCccccccC-CCCceeeeCChHH-------HHHHHHHHhhcccCcchH
Confidence            999985332110111  11121   1127788889988644 3356777766552       333332222222222223


Q ss_pred             HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEec-CCCceEEEeecC------CCChHHHHHHHHH
Q 036024          162 AQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL----GIKVYG-GINAPYVWAHFP------GRKSWDVFAEILE  230 (272)
Q Consensus       162 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~-~~~~~~~~i~l~------~~~~~~~~~~ll~  230 (272)
                      .+.+....+   +.....+..+...++.+++.+.|.++    +..+.. +......++.+.      ..+..++...| .
T Consensus       299 ~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L-~  374 (445)
T d3bc8a1         299 DVLITLLSL---GCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSML-F  374 (445)
T ss_dssp             HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHH-H
T ss_pred             HHHHHHHHH---hhhcchhhHHHHHHHHHHHHHHHHHHHhhcCceeecCCCCCcceEEEeeeccccCCCCHHHHHHHH-H
Confidence            333332222   23444566666667777777777653    555443 233444444443      22333444444 4


Q ss_pred             hcCeEeeC----CC----------CCC----CCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          231 KTHITTVP----GS----------GFG----PGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       231 ~~gi~v~~----g~----------~~~----~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      +.||....    +.          .|+    .....++|+++  ..|++|++.++++|++++
T Consensus       375 ~~gI~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~i~i~~~~~~T~eDID~~v~~L~kil  436 (445)
T d3bc8a1         375 TRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCL  436 (445)
T ss_dssp             HTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             HcCCCcceeeccccccchhhhhhhhcCCCCccCCCCeEEEeCcCCCCHHHHHHHHHHHHHHH
Confidence            44764221    11          011    11235688885  568999999999998763

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.45  E-value=2.8e-12  Score=107.04  Aligned_cols=159  Identities=20%  Similarity=0.320  Sum_probs=110.4

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD   93 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~   93 (272)
                      +...+.+.| ++..++..+...+.--+  .+++|+|++-+|.|||..+.+   +++|+++|+++|+++++|..+..-...
T Consensus       115 ~~~~~~~~Gi~~~~~d~~d~~~~~~ai--~~~t~lv~~Esp~NP~l~v~D---i~~i~~ia~~~g~~~vvDnT~atP~~~  189 (392)
T d1gc0a_         115 LHHGIGEFGVKLRHVDMADLQALEAAM--TPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQ  189 (392)
T ss_dssp             HHHTGGGGTCEEEEECTTCHHHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHC
T ss_pred             hhhhhccCCcccccCCccCHHHHHHhC--CCCCeEEEecccccceeeecc---hHHHHHHHHhcCCEEEEecCccCcccc
Confidence            345667788 88888765332332222  378999999999999999987   999999999999999999999742221


Q ss_pred             CCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHH--HhhhhhccCCcchHHHHHHHHhc
Q 036024           94 GCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDF--NRIICTCFNGASNIAQAGGLACL  170 (272)
Q Consensus        94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~l  170 (272)
                         .+ .++..+    +++.|.+|-++ ....-.|.++++++.        ..+.  ...+.......++.....+.+  
T Consensus       190 ---~P-l~~GaD----ivihS~TKyi~Ghsd~~~G~v~~~~~~--------~~~~r~~~~~~~~G~~~~p~da~ll~r--  251 (392)
T d1gc0a_         190 ---RP-LELGAD----LVVHSATKYLSGHGDITAGIVVGSQAL--------VDRIRLQGLKDMTGAVLSPHDAALLMR--  251 (392)
T ss_dssp             ---CG-GGGTCS----EEEEETTTTTTCSSSCCCEEEEECHHH--------HHHHHHTHHHHHTCCCCCHHHHHHHHH--
T ss_pred             ---Ch-HHhCCC----EEEEecceeecCCcccccccccchhHH--------HHHHHHHHHHHccCCcCChhhHHHHHh--
Confidence               12 233222    99999999884 556667888887777        3332  233333344455554333333  


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          171 SSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                         +.+.+..+.++..+++..+.+.|+++
T Consensus       252 ---gl~TL~lRm~~~~~nA~~lA~~L~~h  277 (392)
T d1gc0a_         252 ---GIKTLNLRMDRHCANAQVLAEFLARQ  277 (392)
T ss_dssp             ---HHTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             ---ccccHHHHHHHHHHHHHHHHHHHHhC
Confidence               33455778889999999999999987

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.45  E-value=1.3e-11  Score=103.81  Aligned_cols=235  Identities=13%  Similarity=0.085  Sum_probs=153.3

Q ss_pred             eeEEeecCCCCCcccCCCC------CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCC-ccccCCCC
Q 036024           24 NIEYLECGPGNNFFPDLKG------TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYA-AYVTDGCP   96 (272)
Q Consensus        24 ~~~~~~~~~~~~~~~dl~~------~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~-~~~~~~~~   96 (272)
                      +.+++.++++ ...+|.++      ..+||+|++-...+|--.  +   .+++.++|++.|+++++|-+|. ++..++..
T Consensus       150 ~~~~Y~~d~~-~~~IDyd~~~~~a~~~kPklIi~G~S~y~r~~--d---~~~~reIad~vga~l~~D~aH~aGLIA~g~~  223 (463)
T d2a7va1         150 ESMPYKLNPK-TGLIDYNQLALTARLFRPRLIIAGTSAYARLI--D---YARMREVCDEVKAHLLADMAHISGLVAAKVI  223 (463)
T ss_dssp             ----CCBCTT-TCSBCHHHHHHHHHHHCCSEEEECCSSCCSCC--C---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSS
T ss_pred             eeeeeeccCC-CCcCcHHHHHHHHhhcCCceEEeccccccccc--C---HHHHHHHhhcccceEEechhhhhHHhhhhhh
Confidence            4566666655 44456443      278999999766666433  3   8899999999999999999996 56666654


Q ss_pred             CCccccCCCCCceEEEecCccccCCCccceeEEEeccccccc-------CCcchHHHHHhhhhhccCCcchHHHHHHHHh
Q 036024           97 RSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFS-------SGFPVINDFNRIICTCFNGASNIAQAGGLAC  169 (272)
Q Consensus        97 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  169 (272)
                      ++.....   |  ++.+|.+|++  +|-|.|.+.+.++....       ....+.+.+.....+...+.+.....|+.++
T Consensus       224 ~sP~~~a---D--vvt~tTHKTl--rGPrgGiIl~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Av  296 (463)
T d2a7va1         224 PSPFKHA---D--IVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAV  296 (463)
T ss_dssp             CCGGGTC---S--EEEEESSGGG--CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHH
T ss_pred             cChhhhh---h--hhhchhhhhh--cCCCceEEEEcccccccccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHH
Confidence            4444332   2  8889999998  56677888887642100       0002255666665555554554544444333


Q ss_pred             -cccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecC-CCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCCCC---
Q 036024          170 -LSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGG-INAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSGFG---  243 (272)
Q Consensus       170 -l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~~~---  243 (272)
                       +.+......++..+++.++++.|.+.|.+.|+.+... .+...+++++.. ..+...++..|++.||.++--.-++   
T Consensus       297 a~~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~vv~ggTdnHlvlvdl~~~~~~G~~ae~~Le~~gI~~Nkn~iP~D~~  376 (463)
T d2a7va1         297 ALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRS  376 (463)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCC
T ss_pred             HHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCCceeeeeccccCCCHHHHHHHHHhccCccCCccCCCCCC
Confidence             3322224568889999999999999999999998653 446678899863 2345667788899999986322221   


Q ss_pred             CCCCCeEEEEc------cCCHHHHHHHHHHHHHh
Q 036024          244 PGGEEYIRISG------FGHRESILEASRRLEAL  271 (272)
Q Consensus       244 ~~~~~~~R~s~------~~~~~~i~~~l~~l~~~  271 (272)
                      +-.++.+|++.      ...++|+.+..+.|.++
T Consensus       377 ~~~~sGiRiGT~a~TtrG~~e~dm~~iA~~I~~~  410 (463)
T d2a7va1         377 AITPGGLRLGAPALTSRQFREDDFRRVVDFIDEG  410 (463)
T ss_dssp             SSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHH
Confidence            22356799994      12577877777766554

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.44  E-value=1.6e-12  Score=111.46  Aligned_cols=250  Identities=14%  Similarity=0.047  Sum_probs=154.1

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHH---HHHHcCCEEEEcc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVE---FARNNGSIIIFDS   85 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~---~~~~~~~~vi~D~   85 (272)
                      +...++..| +++.+|.+++ ++..|++.     .+++.+|+.+.++|.||.+=+.+.+.+|++   .|+++++++.+|.
T Consensus       164 ~~Kaa~~~gi~~~~v~~~~~-~~~~d~~~L~~~i~~~t~~Vv~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDA  242 (450)
T d1pmma_         164 WHKFARYWDVELREIPMRPG-QLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDA  242 (450)
T ss_dssp             HHHHHHHTTCEEEECCCBTT-BCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_pred             HHHHHHHcCCCceEeeecCC-CCcCcHHHHHHHhhhCceEEEeeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeeh
Confidence            667778889 9999999865 56667444     267788888899999999988776665554   4677899999999


Q ss_pred             cCCcccc--CC-CCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHH-Hhhh-hhc-cCCcc
Q 036024           86 AYAAYVT--DG-CPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDF-NRII-CTC-FNGAS  159 (272)
Q Consensus        86 ~~~~~~~--~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~-~~~~-~~~-~~~~~  159 (272)
                      +++++..  .. .......   ...-..+..|.+|.++ ....+||+...+.............+ ..-. ..+ ..+-+
T Consensus       243 A~gG~~~p~~~~~~~~~~~---~~~aDSi~~s~HK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~sr~  318 (450)
T d1pmma_         243 ASGGFLAPFVAPDIVWDFR---LPRVKSISASGHKFGL-APLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRP  318 (450)
T ss_dssp             TTGGGTHHHHCTTCCCSTT---STTEEEEEEETTTTTC-CCSSCEEEEESSGGGSCGGGCEEEEETTEEEEECCSCCSCB
T ss_pred             hhccceeeeechhhhhhhc---ccceeEeecChhhccC-CCCCeeEEEecChhhhhhhcccccCcCCCCcCCCcccCccc
Confidence            9986532  11 1111112   2223367778999775 33458999887654211100000011 1001 111 11112


Q ss_pred             hHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC----CceEEEeecC-----CCChHHHHHHHH
Q 036024          160 NIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI----NAPYVWAHFP-----GRKSWDVFAEIL  229 (272)
Q Consensus       160 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~~~~~~i~l~-----~~~~~~~~~~ll  229 (272)
                      .....+....+...+.+.+++..++..++++++.+.|++. ++++..+.    .-+.+.+.+.     +.+..++..+| 
T Consensus       319 ~~~~~~~~~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~~~el~~~~~p~~~l~~V~Fr~~~~~~~~~~~~~l~~~L-  397 (450)
T d1pmma_         319 AGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERL-  397 (450)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEEEECCTTTBSSEEEEEECTTCCCSSCHHHHHHHH-
T ss_pred             hHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeCCCCCCceEEEEEecCCcccCCCCHHHHHHHH-
Confidence            2222223334444555777999999999999999999998 57776431    2345666664     23344555555 


Q ss_pred             HhcCeEeeCCCCCC--CCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          230 EKTHITTVPGSGFG--PGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       230 ~~~gi~v~~g~~~~--~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      ++.|..+. ...+.  ......+|+.+.  .|+++++++++.|+++
T Consensus       398 ~~~Gw~v~-~~~~p~~~~~~~~lRvvv~~~~t~e~~d~lv~dl~~~  442 (450)
T d1pmma_         398 RLRGWQVP-AFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKAS  442 (450)
T ss_dssp             HTTTCBCC-EEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             HHcCCeee-ccCcCCCcCCcEEEEEEccCCCCHHHHHHHHHHHHHH
Confidence            45587663 22121  223457999973  4888899999888775

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.43  E-value=9.4e-13  Score=113.16  Aligned_cols=213  Identities=14%  Similarity=0.075  Sum_probs=131.3

Q ss_pred             CceEEEEecCCCcc-ccCCCHHHHHHHHHHHHHcCCEEEEcccCCcccc--------CCCCCCcccc----CCCCCceEE
Q 036024           45 RTDIIFFCSPNNPT-GHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVT--------DGCPRSIYEI----PGAREVAIE  111 (272)
Q Consensus        45 ~~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~--------~~~~~~~~~~----~~~~~~~i~  111 (272)
                      .+.++++.+++|+. |+.++.+++++|.++|++||+.+++|+++.....        +....++.+.    .+..|  ++
T Consensus       174 ~~~~i~~e~~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad--~~  251 (456)
T d1c7ga_         174 NIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYAD--GC  251 (456)
T ss_dssp             GEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCS--EE
T ss_pred             cceeEEeeecccccccceecHHHHHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccc--cE
Confidence            45678888998885 6788999999999999999999999999863110        0011222221    11122  66


Q ss_pred             EecCccccCCCccceeEEEecccccccCCcchHHHHHhhh---h--hccCCcchHHHHHHHHhcccccHHHHHHHHHHHH
Q 036024          112 ISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII---C--TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYK  186 (272)
Q Consensus       112 ~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  186 (272)
                      ..|++|.++.++  .|+++.+++.+       .+..+...   .  ....+.+.....++...+.+...   .+..++-.
T Consensus       252 s~s~~K~~~~~~--GG~i~~~~~~l-------~~~~r~~~~~~~g~~~~g~~~~~~~~a~a~~l~e~~~---~~~l~~r~  319 (456)
T d1c7ga_         252 TMSGKKDCLVNI--GGFLCMNDEEM-------FSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIEHRV  319 (456)
T ss_dssp             EEETTTTTCCSS--CEEEEESCHHH-------HHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHHHHH
T ss_pred             EEeccccccccc--eeEEEcCCHHH-------HHHHHHhccccCCCcccchhhHHHHHHHHHHHHHhcC---HHHHHHHH
Confidence            779999998553  37777776653       33332222   1  11222333333333332321111   22334446


Q ss_pred             HHHHHHHHHHHhCCCeEecCCCceEEEeec----C-----CCChHHHHHHHHHhcCeEeeCCCCCC----C-------CC
Q 036024          187 ENTKILIDTLASLGIKVYGGINAPYVWAHF----P-----GRKSWDVFAEILEKTHITTVPGSGFG----P-------GG  246 (272)
Q Consensus       187 ~~~~~l~~~L~~~g~~~~~~~~~~~~~i~l----~-----~~~~~~~~~~ll~~~gi~v~~g~~~~----~-------~~  246 (272)
                      ++.++|.+.|.+.|+.+..+.++..++++.    +     ......+...++.+.||...+...+.    +       ..
T Consensus       320 ~~~~~L~e~L~~~g~~vv~p~g~~~v~vda~~~~~~i~~~~~~~~~~~~~l~~~~GIr~~~~g~~~~~~~~~~g~~~~~~  399 (456)
T d1c7ga_         320 KQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPK  399 (456)
T ss_dssp             HHHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHCTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCSSSCCBCCCS
T ss_pred             HHHHHHHHHHHhccCCcccCCCCcceeEechhhccCCCcccccHHHHHHHHHHHhCeeecccCccccccCCcccCccCCc
Confidence            677899999999999988887888777753    2     12345567777778899764322111    0       12


Q ss_pred             CCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          247 EEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       247 ~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                      ...+|+++.   .|+++++..++.|+++
T Consensus       400 ~e~vRLaip~~~~T~e~iD~Vae~i~~v  427 (456)
T d1c7ga_         400 LETVRLTIPRRVYTYAHMDVVADGIIKL  427 (456)
T ss_dssp             CCEEEEECCTTSCCHHHHHHHHHHHHHH
T ss_pred             cceEEEecCcccCCHHHHHHHHHHHHHH
Confidence            346999973   2899999998888764

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.41  E-value=1.6e-10  Score=96.42  Aligned_cols=158  Identities=16%  Similarity=0.175  Sum_probs=105.7

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHH--cCCEEEEcccCCcccc
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN--NGSIIIFDSAYAAYVT   92 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~--~~~~vi~D~~~~~~~~   92 (272)
                      ...+.+.| ++..+.......+.-.+  .+++++|++-+|.||+..+.+   +++++++|++  +|+++++|+.+.....
T Consensus       115 ~~~l~~~Gi~~~~~d~~d~~~~~~~i--~~~t~~i~~EtpsNP~l~v~D---i~~i~~~a~~~~~g~~~vVDnT~atP~~  189 (391)
T d1cl1a_         115 SKILSKLGVTTSWFDPLIGADIVKHL--QPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL  189 (391)
T ss_dssp             HHTGGGGTCEEEEECTTCGGGGGGTC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS
T ss_pred             hhcccccccccccccCcccccccccc--ccccceeeecccCcccccccc---cHHHHHHHHhccCCcEEEEeccccchhh
Confidence            45567788 77777765443333222  278999999999999999987   7788888866  4999999999974211


Q ss_pred             CCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcc
Q 036024           93 DGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLS  171 (272)
Q Consensus        93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  171 (272)
                         ..+ ..+..  |  +++.|.+|.++ ....=.|.++.+++.        ...+...........++.....+.    
T Consensus       190 ---~~P-l~~Ga--D--ivvhS~TKy~~GhsdvlgG~vv~~~~~--------~~~~~~~~~~~G~~~~p~~a~ll~----  249 (391)
T d1cl1a_         190 ---FKA-LDFGI--D--VSIQAATKYLVGHSDAMIGTAVCNARC--------WEQLRENAYLMGQMVDADTAYITS----  249 (391)
T ss_dssp             ---SCG-GGGTC--S--EEEEETTTTTTCSSSCCCEEEEECTTT--------HHHHHHHHHHTTCCCCHHHHHHHH----
T ss_pred             ---hcc-ccccc--c--eEEeecchhccccccccccceeccccc--------cccchhhhhcccccCCchhhhhhh----
Confidence               112 22322  2  99999999885 334445777776665        444444444444445554433222    


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          172 SEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                       .+.+.+..+.++..+++..+.+.|+++
T Consensus       250 -rgl~TL~lR~~~~~~nA~~vA~~L~~h  276 (391)
T d1cl1a_         250 -RGLRTLGVRLRQHHESSLKVAEWLAEH  276 (391)
T ss_dssp             -HHHTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             -ccchhHHHHHHHHHHHHHHHHHHHHhc
Confidence             333555778889999999999999987

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.41  E-value=3.7e-11  Score=100.19  Aligned_cols=157  Identities=17%  Similarity=0.267  Sum_probs=108.6

Q ss_pred             HHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCC
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGC   95 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~   95 (272)
                      ..+.+.| ++..+.......+...+  .+++|+|++-+|.|||..+.+   +++|+++|+++|+++++|..+..-..   
T Consensus       121 ~~l~~~Gi~~~~vd~~d~~~~~~~i--~~~Tklv~~Esp~NP~l~v~D---i~~i~~iA~~~gi~~vvDnT~atP~~---  192 (397)
T d1y4ia1         121 HSMPKFGINVRFVDAGKPEEIRAAM--RPETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYC---  192 (397)
T ss_dssp             THHHHTTCEEEEECTTSHHHHHHHC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT---
T ss_pred             cccCCCceEeeccCCCCHHHHHHhc--CCCCcEEEecCCcccceeecc---cHHHHHHhhcCCceEEecCcccCccc---
Confidence            4567788 88888765432333223  278999999999999999987   99999999999999999999874111   


Q ss_pred             CCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHH--HHhhhhhccCCcchHHHHHHHHhccc
Q 036024           96 PRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVIND--FNRIICTCFNGASNIAQAGGLACLSS  172 (272)
Q Consensus        96 ~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~~~~l~~  172 (272)
                      ..+ ..+..  |  |++.|++|.++ ....-.|.++++++.        +.+  +...+.......++.....+.+-+  
T Consensus       193 ~~P-l~~Ga--D--ivihS~TKyi~Ghsdvl~G~v~~~~~~--------~~~~r~~~~~~~~G~~l~p~~a~l~~rgl--  257 (397)
T d1y4ia1         193 QQP-LQLGA--D--IVVHSVTKYINGHGDVIGGIIVGKQEF--------IDQARFVGLKDITGGCMSPFNAWLTLRGV--  257 (397)
T ss_dssp             CCG-GGGTC--S--EEEEETTTTTTCSSCCCCEEEEECHHH--------HHHHHHTHHHHTTCCCCCHHHHHHHHHHH--
T ss_pred             Ccc-hhcCC--C--EEEEehhhhcCCCcceeeeccCCCHHH--------HHHHHHHHHHhCcCCcCCHHHHHHHHcCc--
Confidence            112 23322  2  99999999885 455556777777776        333  323333334445555444333333  


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          173 EGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                         +.+.-+.++..+++..+.+.|+.+
T Consensus       258 ---~TL~lRm~~~~~nA~~lA~~L~~h  281 (397)
T d1y4ia1         258 ---KTLGIRMERHCENALKIARFLEGH  281 (397)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             ---CcHHHHHHHHHHHHHHHHHHHHhC
Confidence               445667888999999999999987

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.39  E-value=3.6e-12  Score=108.91  Aligned_cols=212  Identities=13%  Similarity=0.026  Sum_probs=127.2

Q ss_pred             CceEEEEecCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCc
Q 036024           45 RTDIIFFCSPNNPTGH-AATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTG  123 (272)
Q Consensus        45 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g  123 (272)
                      ++.++++-.-+...|. ..|++.+++|.++|++||+++|.||++.++...+...........+|.+    +++|.+| .|
T Consensus       201 ~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~~~~gv~PDi~----~~gK~l~-gG  275 (431)
T d1zoda1         201 NLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDIL----TLSKTLG-AG  275 (431)
T ss_dssp             CEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE----EECHHHH-TT
T ss_pred             cccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEeccccccccccccccccccCCCCcchh----ccccccc-cc
Confidence            4445555422433455 4678889999999999999999999999866555444444444455533    5799998 88


Q ss_pred             cceeEEEecccccccCCcchHHHHHh--hhhhccCCcchHHHHHHHHhcccccH-HHHHHHHHHHHHHHHHHHHHHHhCC
Q 036024          124 VRLGWTVVPEELLFSSGFPVINDFNR--IICTCFNGASNIAQAGGLACLSSEGL-EAVHSVVDYYKENTKILIDTLASLG  200 (272)
Q Consensus       124 ~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g  200 (272)
                      ..++.+++.++.        ......  ....++.+.++++..|+.+.+..... ...++..+.-....+.+.+.+++.+
T Consensus       276 ~p~~av~~~~~~--------~~~~~~~~~~~~~T~~g~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~  347 (431)
T d1zoda1         276 LPLAAIVTSAAI--------EERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFD  347 (431)
T ss_dssp             SSCEEEEECHHH--------HHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             cccceeeeeecc--------hhhhhcccccccCCCCCCcchHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhhhcCC
Confidence            888998888776        333322  22345566888888888887763222 2223333333333344444444444


Q ss_pred             CeEecCCCceEEEeecC---------CCChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHH
Q 036024          201 IKVYGGINAPYVWAHFP---------GRKSWDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLE  269 (272)
Q Consensus       201 ~~~~~~~~~~~~~i~l~---------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~  269 (272)
                      +....-..|.+..+.+.         ......+...++++ |+....-.  .+...+.+|++  +..|++|+++++++|+
T Consensus       348 ~i~~vrG~Glm~~ie~~~~~~~~~~~~~~~~~i~~~~~~~-Gl~~~~~~--~~~~~~~i~l~Ppl~it~~eid~~~~~l~  424 (431)
T d1zoda1         348 CIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNL-GLSMNIVQ--LPGMGGVFRIAPPLTVSEDEIDLGLSLLG  424 (431)
T ss_dssp             TEEEEEEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHT-TEECCEEC--CTTSCCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             CeEEEeecceEEEEEEecCCcccCccHHHHHHHHHHHHHh-CcccCeee--ecCCCCEEEEECCCCCCHHHHHHHHHHHH
Confidence            32211113445445441         11124455666655 88642211  12235689998  4569999999999988


Q ss_pred             HhC
Q 036024          270 ALF  272 (272)
Q Consensus       270 ~~l  272 (272)
                      ++|
T Consensus       425 ~al  427 (431)
T d1zoda1         425 QAI  427 (431)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.39  E-value=3.2e-11  Score=100.68  Aligned_cols=159  Identities=15%  Similarity=0.224  Sum_probs=106.3

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCC
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG   94 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~   94 (272)
                      ...+.+.| ++..+...........+ ..+++++|++-+|.|||..+.+   +++|+++|+++|+++|+|..+.....  
T Consensus       124 ~~~~~~~gi~~~~~~~~~~~~~~~~~-~~~~t~~v~~EspsNP~l~v~D---i~~ia~ia~~~g~~~vVDnT~atP~~--  197 (398)
T d1qgna_         124 ETILPKMGITATVIDPADVGALELAL-NQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLN--  197 (398)
T ss_dssp             HHTGGGGTCEEEEECSSCHHHHHHHH-HHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT--
T ss_pred             cccccccccccccccccchhhhhhhh-ccccceEEEccCccccccccch---HHHHHHHHhhcCCEEEecceeecccc--
Confidence            45566777 77666643221111111 1379999999999999999987   99999999999999999999864111  


Q ss_pred             CCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc
Q 036024           95 CPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE  173 (272)
Q Consensus        95 ~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~  173 (272)
                       ..+ ..+..  |  |++.|.+|.+| ....-.|.+..+.++        ...+...........++.....+.+-    
T Consensus       198 -~~P-l~~Ga--D--iVihS~TKy~~Ghsdv~~G~v~~~~~~--------~~~~~~~~~~~G~~l~p~~a~ll~rg----  259 (398)
T d1qgna_         198 -QKA-LALGA--D--LVLHSATKFLGGHNDVLAGCISGPLKL--------VSEIRNLHHILGGALNPNAAYLIIRG----  259 (398)
T ss_dssp             -CCT-TTTTC--S--EEEECTTTTTTCSSSCCCEEEEECHHH--------HHHHHHHHHHHCCCCCHHHHHHHHHH----
T ss_pred             -CCc-hhhCC--C--EEEEechhhcCcccceeehhhcchhhh--------hhhhhhhcccCCCcCCHHHHHHHHhc----
Confidence             111 22221  2  99999999886 334445666666666        45555555544444555544433333    


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          174 GLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                       .+.+.-+.++..+++..+.+.|+++
T Consensus       260 -l~TL~lRm~~~~~nA~~lA~~L~~h  284 (398)
T d1qgna_         260 -MKTLHLRVQQQNSTALRMAEILEAH  284 (398)
T ss_dssp             -GGGHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             -chHHHHHHHHHHHHHHHHHHHHHhC
Confidence             3455778899999999999999987

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.39  E-value=4.2e-12  Score=109.47  Aligned_cols=256  Identities=9%  Similarity=-0.042  Sum_probs=153.9

Q ss_pred             ccccCccc--chHHhcccc-eeEEeecCCCCCcccC-CCCC--------CCceEEEEecCCCccccCCCHHHHHHHHHHH
Q 036024            7 VIVGQAGD--LEDEVGKYC-NIEYLECGPGNNFFPD-LKGT--------SRTDIIFFCSPNNPTGHAATQNQLEQLVEFA   74 (272)
Q Consensus         7 ~~~~~~~~--~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~~--------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~   74 (272)
                      ++.+...+  +...+.-.| .++.+|.++++.+.++ +++.        ..+-+|+.+..++.||.+=|   +++|+++|
T Consensus       185 v~~s~~~H~Si~ka~~~lGl~~~~v~~d~~~~md~~~L~~~i~~~~~~g~~p~~VvataGtt~~G~iDp---l~~I~~i~  261 (476)
T d1js3a_         185 AYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN---LLEVGPIC  261 (476)
T ss_dssp             EEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHH
T ss_pred             EEecccccHHHHHHHHhcCceEEEeccCCCCCcCHHHHHHHHHHHHhcCCCcEEEeecCCCccceeecc---HHHHHHHH
Confidence            34443333  556667788 8888988765444433 2221        22345666688999999955   99999999


Q ss_pred             HHcCCEEEEcccCCccccC-CCCCCccccCCCCCceEEEecCccccCCCccceeEEEeccccc-ccCCcchHHHHHh---
Q 036024           75 RNNGSIIIFDSAYAAYVTD-GCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELL-FSSGFPVINDFNR---  149 (272)
Q Consensus        75 ~~~~~~vi~D~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~-~~~~~~~~~~~~~---  149 (272)
                      ++|++++.+|.+|+++... ......  +.+.+.---+.-+++|.++.| .-+|.+...+... ...+......+..   
T Consensus       262 ~~~~~wlHVDAA~Gg~~~~~~~~~~~--~~gi~~aDSit~d~HK~l~~P-~~~g~~l~r~~~~~~~~~~~~~~~~~~~~~  338 (476)
T d1js3a_         262 HEEDIWLHVDAAYAGSAFICPEFRHL--LNGVEFADSFNFNPHKWLLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQ  338 (476)
T ss_dssp             HHTTCEEEEECTTGGGGGGSTTTGGG--GTTGGGCSEEEECHHHHSSCC-SSCEEEEESCHHHHHGGGC-----------
T ss_pred             HhcCcEEEEecccchhhhhhcchhhh--hcCCcccceeeecCccccccC-CcceeecccchHHHHHHHhcChhhhccccc
Confidence            9999999999999875433 222221  111211114555789988755 4577777765431 1100000000100   


Q ss_pred             -------hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCceEEEeecCCCC-
Q 036024          150 -------IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAPYVWAHFPGRK-  220 (272)
Q Consensus       150 -------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~i~l~~~~-  220 (272)
                             ....+...+-......+...+...+.+.++++.++..+.++++.+.+++. ++++..+.....+.+++.+.+ 
T Consensus       339 ~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~G~~g~~~~i~~~~~lA~~l~~~l~~~~~fel~~~p~l~iV~Fr~~~~d~  418 (476)
T d1js3a_         339 GSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSDG  418 (476)
T ss_dssp             -CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSCHH
T ss_pred             cccccccccccccccchhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCceEEEEEEccCChH
Confidence                   00000000111111112333334455777889999999999999999988 899987777777888886432 


Q ss_pred             -hHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          221 -SWDVFAEILEKTHITTVPGSGFGPGGEEYIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       221 -~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                       ...+.+++.++..+.+.+..   ..+...+|+++.   +++++++.+++.|+++
T Consensus       419 ~n~~l~~~l~~~G~~~~s~t~---~~g~~~lR~~i~n~~Tt~~did~~~~~i~~~  470 (476)
T d1js3a_         419 LNEALLERINSARKIHLVPCR---LRGQFVLRFAICSRKVESGHVRLAWEHIRGL  470 (476)
T ss_dssp             HHHHHHHHHHHHTSCBCEEEE---ETTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCEEEeeee---ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence             34566666666335554322   234568999964   4788999999998874

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.38  E-value=5.5e-12  Score=108.48  Aligned_cols=199  Identities=13%  Similarity=0.035  Sum_probs=125.0

Q ss_pred             CCceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCCCCccccCC--CCCceEEEecCccccC
Q 036024           44 SRTDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCPRSIYEIPG--AREVAIEISSFSKFSG  120 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g  120 (272)
                      .++.+|++-.-+...| ...+++.+++|.++|++||+++|.||++.++...|.......+..  .+|  ++  +++|.++
T Consensus       247 ~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~e~~gi~~~PD--iv--~~gK~l~  322 (461)
T d1ohwa_         247 KTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPAD--VM--TFSKKMM  322 (461)
T ss_dssp             CCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTCSSTTSSSSGGGGGCCSSCCS--EE--EECGGGS
T ss_pred             CccceeeeccccccccccCchhhHHHHHHHHHHhhCcceeccccccccccccccccccccccccCch--hh--hhhhccc
Confidence            3455555554455555 446788899999999999999999999998765554333333322  234  22  6789886


Q ss_pred             CCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 036024          121 FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-  199 (272)
Q Consensus       121 ~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-  199 (272)
                       .    |+....... .        .........+++.++++..++.+.++....   +...++.+++.+++.+.|.++ 
T Consensus       323 -~----g~~~~~~~~-~--------~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~---~~l~~~~~~~g~~l~~~l~~l~  385 (461)
T d1ohwa_         323 -T----GGFFHKEEF-R--------PNAPYRIFNTWLGDPSKNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQ  385 (461)
T ss_dssp             -S----EEEEECGGG-S--------CSSTTSSCCSCSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHH
T ss_pred             -c----ccccccccc-c--------cccccccccccccccccchhhcccchhhhh---hhHHHHHHHHHHHHHHHHHHHH
Confidence             3    343333322 1        112223344556778888888887773322   234455555556666666553 


Q ss_pred             ---C--Ce-EecCCCceEEEeecCCCCh-HHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEE--ccCCHHHHHHHHHHHHH
Q 036024          200 ---G--IK-VYGGINAPYVWAHFPGRKS-WDVFAEILEKTHITTVPGSGFGPGGEEYIRIS--GFGHRESILEASRRLEA  270 (272)
Q Consensus       200 ---g--~~-~~~~~~~~~~~i~l~~~~~-~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s--~~~~~~~i~~~l~~l~~  270 (272)
                         .  +. +.+  .|.++.++++.... .++...++++ |+.+.+..      .+.+||.  +..|++|+++++++|++
T Consensus       386 ~~~~~~i~~vrG--~Gl~~~ie~~~~~~~~~i~~~~~~~-Gll~~~~~------~~~ir~~PpL~it~~eid~~~~~l~~  456 (461)
T d1ohwa_         386 ARYPQFISRVRG--RGTFCSFDTPDESIRNKLISIARNK-GVMLGGCG------DKSIRFRPTLVFRDHHAHLFLNIFSD  456 (461)
T ss_dssp             HHCTTTCEEEEE--ETTEEEEECSSHHHHHHHHHHHHHT-TEECEEET------TTEEECCCCTTCCHHHHHHHHHHHHH
T ss_pred             hhCCCceEEeee--eeEEEEEEcCCHHHHHHHHHHHHHC-CeEEeeCC------CCEEEEeCCcCCCHHHHHHHHHHHHH
Confidence               1  22 323  46677788874333 3455555555 99997643      4678988  56699999999999998


Q ss_pred             hC
Q 036024          271 LF  272 (272)
Q Consensus       271 ~l  272 (272)
                      +|
T Consensus       457 ~l  458 (461)
T d1ohwa_         457 IL  458 (461)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=8.6e-11  Score=97.72  Aligned_cols=159  Identities=13%  Similarity=0.263  Sum_probs=105.1

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCC
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG   94 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~   94 (272)
                      ...+.+.| .+..+.......+...+  .+++|+|++-+|.|||..+.+   +++|+++|+++|+++|+|..+....   
T Consensus       107 ~~~~~~~g~~~~~~d~~d~~~~~~~~--~~~t~~v~~EspsNP~l~v~D---i~~i~~ia~~~g~~~vVDNT~atP~---  178 (384)
T d1cs1a_         107 DSLAKRGCYRVLFVDQGDEQALRAAL--AEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPA---  178 (384)
T ss_dssp             HHHHTTTSCEEEEECTTCHHHHHHHH--HTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTT---
T ss_pred             hhhhcccccccccccCCCHHHHHhhc--cccccEEEEeccccccceecc---HHHHhhhhhhcCcEEEEeccccCcc---
Confidence            34455566 55555543221221111  379999999999999999987   9999999999999999999986411   


Q ss_pred             CCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHhcccc
Q 036024           95 CPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLACLSSE  173 (272)
Q Consensus        95 ~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~  173 (272)
                       ......+..  |  |++.|.+|.++ ....-.|.++.+++..       ...+...........++.....+.+     
T Consensus       179 -~~~Pl~~Ga--D--iVvhS~TKyi~Ghsdv~~G~vv~~~~~~-------~~~~~~~~~~~G~~~~p~~a~ll~r-----  241 (384)
T d1cs1a_         179 -LQNPLALGA--D--LVLHSCTKYLNGHSDVVAGVVIAKDPDV-------VTELAWWANNIGVTGGAFDSYLLLR-----  241 (384)
T ss_dssp             -TCCGGGGTC--S--EEEEETTTTTTCSSCCCCEEEEESSHHH-------HHHHHHHHHHHTCBCCHHHHHHHHH-----
T ss_pred             -cccccccCC--C--EEEEccccccccCCCcccccccCCchhh-------hhhhhhhhhhhhhccccccHHHHhh-----
Confidence             111222322  2  99999999885 4555567777766552       3444444444444455554433333     


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          174 GLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      +.+.+.-+.++..+++..+.+.|+.+
T Consensus       242 gL~TL~lRm~~~~~nA~~lA~~L~~h  267 (384)
T d1cs1a_         242 GLRTLVPRMELAQRNAQAIVKYLQTQ  267 (384)
T ss_dssp             HHTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccchhHHHHHHHHHHHHHHHHhcccC
Confidence            33445667888999999999999987

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.33  E-value=4.9e-11  Score=102.68  Aligned_cols=218  Identities=14%  Similarity=-0.025  Sum_probs=121.8

Q ss_pred             CCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCCCC--CCccccC----CCCCceEEEecCcc
Q 036024           44 SRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDGCP--RSIYEIP----GAREVAIEISSFSK  117 (272)
Q Consensus        44 ~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~~~--~~~~~~~----~~~~~~i~~~s~sK  117 (272)
                      ++++.+++.+.+|..|.+.+   +++|+++|+++++++++|++|+........  .+.....    ...+..+++.|++|
T Consensus       172 ~~~~~v~v~~~~~~~G~~~d---l~~I~~ia~~~g~~l~vD~A~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK  248 (462)
T d1c4ka2         172 KRPFRLAVIQLGTYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHK  248 (462)
T ss_dssp             SCCBSEEEEESBCTTSEEEC---HHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHH
T ss_pred             cCCceeEEEEeeeeccchhh---HHHHHHHHHHcCCEEEEechhhccccccCcCCcchhhccccccccCCccEEEEecCc
Confidence            44555666666677899877   899999999999999999999854333211  1111111    01123488999999


Q ss_pred             ccCCCccceeEEEecccccccCCcch-HHHHHhhhhhccCCcchHHHHHHHHhc-ccccHHHHHHHHHHHHHHHHHHHHH
Q 036024          118 FSGFTGVRLGWTVVPEELLFSSGFPV-INDFNRIICTCFNGASNIAQAGGLACL-SSEGLEAVHSVVDYYKENTKILIDT  195 (272)
Q Consensus       118 ~~g~~g~r~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~l-~~~~~~~~~~~~~~~~~~~~~l~~~  195 (272)
                      .+|.++ ..+++...+..+....... .............+++...+.+...+. ........++..++..++.+++++.
T Consensus       249 ~lg~~~-~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~sp~~~~~asl~~a~~~~~~~~g~~l~~~~~~~a~~~r~~  327 (462)
T d1c4ka2         249 QQAGFS-QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKK  327 (462)
T ss_dssp             HSSCCT-TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccc-ceEEEEeccccccccchhhhHHHHHHhhhhcccCCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            998543 2334444444432111100 122222222222333444444333332 2222344577778888899999999


Q ss_pred             HHhCC-CeEe-c---------------------------C----------CCceE------EEeecCCC-----------
Q 036024          196 LASLG-IKVY-G---------------------------G----------INAPY------VWAHFPGR-----------  219 (272)
Q Consensus       196 L~~~g-~~~~-~---------------------------~----------~~~~~------~~i~l~~~-----------  219 (272)
                      +.+++ .... .                           +          ....+      +.+..++.           
T Consensus       328 l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~k~~l~~~gi~~~~g~~~~~G  407 (462)
T d1c4ka2         328 LIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFG  407 (462)
T ss_dssp             HHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSC
T ss_pred             HHHhhhhhhcccccccccccccccchHhhhcccchhccCCcchhccccccCccceecccceeEEecCCccccccchhhcC
Confidence            88762 1110 0                           0          00001      22332211           


Q ss_pred             ChHHHHHHHHHhcCeEeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          220 KSWDVFAEILEKTHITTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       220 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      .+.....+.++++||.+.-.      +.+.+|+++  ..|++++++++++|+++
T Consensus       408 ~~~~~~~~~L~~~gI~~e~~------~~~~i~~~~s~~~T~edid~li~aL~ei  455 (462)
T d1c4ka2         408 VPATIVANYLRDHGIIPEKS------DLNSILFLMTPAETPAKMNNLITQLLQL  455 (462)
T ss_dssp             CCHHHHHHHHHHTTCCCSEE------CSSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHcCCeeecc------CCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            12334455567789976422      256799886  45999999999998874

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.32  E-value=7e-11  Score=96.66  Aligned_cols=159  Identities=20%  Similarity=0.299  Sum_probs=105.5

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHH-HHcCCEEEEcccCCcccc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFA-RNNGSIIIFDSAYAAYVT   92 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~-~~~~~~vi~D~~~~~~~~   92 (272)
                      +...+.+.| ++..++......+.-.+  .+++++|++-+|.||+..+.+   ++++++++ +++++++|+|..+.....
T Consensus        54 ~~~~l~~~gi~~~~~d~~d~~~~~~~i--~~~t~~i~~Es~~np~~~v~d---~~~~~~~~a~~~~~~~vVDnT~atp~~  128 (331)
T d1pffa_          54 FEHQLRKFGVEVDFIDMAVPGNIEKHL--KPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPIL  128 (331)
T ss_dssp             HHTHHHHTTCEEEEECTTSTTHHHHTC--CTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHH
T ss_pred             HHHHHHhcCeEEEEecccchhhHhhhc--ccccceeeeeccccccccccc---chhhhhhhhcccCceEEeecccccccc
Confidence            445677889 88888876543443323  378999999999999999987   77777764 567999999999974221


Q ss_pred             CCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHh--hhhhccCCcchHHHHHHHHh
Q 036024           93 DGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNR--IICTCFNGASNIAQAGGLAC  169 (272)
Q Consensus        93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~  169 (272)
                      .   .+ ..+..  |  |++.|.+|.++ ....-.|.++.+++.        ..+...  .........++...     +
T Consensus       129 ~---~p-l~~Ga--D--iVv~S~TKy~~Gh~d~~~G~v~~~~~~--------~~~~~~~~~~~~~G~~l~p~~a-----~  187 (331)
T d1pffa_         129 T---NP-LDLGV--D--IVVHSATKYINGHTDVVAGLVCSRADI--------IAKVKSQGIKDITGAIISPHDA-----W  187 (331)
T ss_dssp             C---CG-GGGTC--S--EEEEETTTTTSSSSSCCCEEEEECHHH--------HHHHHHTCCCCCCCCCCCHHHH-----H
T ss_pred             c---cc-cccCC--C--EEEecchhhcCCCCccccccccccccc--------hhhhhhhhhhhccCCCCCHHHH-----H
Confidence            1   12 22321  2  99999999885 345556777776655        222221  12222333333322     2


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          170 LSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       170 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                      +...+.+.+..+.++..+++..+.+.|+++
T Consensus       188 ll~rgl~Tl~~Rm~~~~~nA~~lA~~L~~h  217 (331)
T d1pffa_         188 LITRGTLTLDMRVKRAAENAQKVAEFLHEH  217 (331)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhC
Confidence            222344667888899999999999999987

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.30  E-value=3.7e-10  Score=94.81  Aligned_cols=200  Identities=16%  Similarity=0.113  Sum_probs=117.8

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccCC
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTDG   94 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~~   94 (272)
                      ...+.+.| ++..+..+..... ......+++|+|++-+|.|||..+.+   +++|+++|+++|+++|+|+.++.-   +
T Consensus       115 ~~~~~~~gi~~~~~d~~~~~~~-~~~~~~~~t~li~~EtpsNP~l~v~D---i~~i~~iA~~~g~~~vvDnT~a~t---P  187 (421)
T d2ctza1         115 KVTLKRLGIEVRFTSREERPEE-FLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMG---G  187 (421)
T ss_dssp             HTHHHHTTCEEEECCTTCCHHH-HHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGG---G
T ss_pred             HHHHhhccccceecccccCcch-hccccCCCceEEEEcCCCcceeEecc---hHHHHHHHHhcCCceEeccccccc---c
Confidence            34556777 7776654322111 11112379999999999999999977   999999999999999999998621   1


Q ss_pred             CCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcc--------------hHHHH------H----h
Q 036024           95 CPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFP--------------VINDF------N----R  149 (272)
Q Consensus        95 ~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~--------------~~~~~------~----~  149 (272)
                      -......+..+    |++.|.+|.++ ....=.|.++.+++......+.              ..+.+      .    .
T Consensus       188 ~~~~Pl~~GaD----iVvhS~TKyl~GHsD~l~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (421)
T d2ctza1         188 YLLRPLAWGAA----LVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVD  263 (421)
T ss_dssp             TSCCGGGGTCS----EEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHT
T ss_pred             eeccccccCCc----EEEEechhhccCCCCeEEEEEEcCCcchhhhcccccccCCchhhhhhHHHHHhccHHHHHHHHHH
Confidence            01112233222    99999999885 3455567777666542211110              00111      0    0


Q ss_pred             hhhhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eEecC-----------------CCce
Q 036024          150 IICTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GI-KVYGG-----------------INAP  210 (272)
Q Consensus       150 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~-----------------~~~~  210 (272)
                      .........++....     +...+.+.+.-+.++..+++..+.+.|+++ .+ ++..|                 ..|.
T Consensus       264 ~~~~~G~~~sP~~a~-----l~~rgl~TL~lRm~~~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~~~~a~~~~~g~~G~  338 (421)
T d2ctza1         264 GLRDQGQALGPFEAW-----VVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGA  338 (421)
T ss_dssp             HHHHHCCCCCHHHHH-----HHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCS
T ss_pred             HHHhccCCCCHHHHH-----HHhcCCcchhhHHHHHHHHHHHHHhhhccCCCeeEEecCCcCCCccHHHHHHhcCCCCce
Confidence            011122223444322     222333556778889999999999999987 33 23222                 1255


Q ss_pred             EEEeecCCCChHHHHHHHHHhcC
Q 036024          211 YVWAHFPGRKSWDVFAEILEKTH  233 (272)
Q Consensus       211 ~~~i~l~~~~~~~~~~~ll~~~g  233 (272)
                      ++.+.+.+  +.+...+.++.-.
T Consensus       339 ~~sf~l~~--~~~~a~~f~~~L~  359 (421)
T d2ctza1         339 VLTFGLKG--GYEAAKRFISRLK  359 (421)
T ss_dssp             EEEEEETT--HHHHHHHHHHTCS
T ss_pred             EEEEEecC--CHHHHHHHHHcCC
Confidence            67788863  3444555555543

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.30  E-value=1.1e-11  Score=107.03  Aligned_cols=213  Identities=16%  Similarity=0.109  Sum_probs=125.1

Q ss_pred             ceEEEEecCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC------CC--CCCccc----cCCCCCceEEE
Q 036024           46 TDIIFFCSPNNPTG-HAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD------GC--PRSIYE----IPGAREVAIEI  112 (272)
Q Consensus        46 ~~~i~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~------~~--~~~~~~----~~~~~~~~i~~  112 (272)
                      +.++++..+||..| ..++.+++++|.++|++||+++++|+++......      +.  ......    +....  .++.
T Consensus       183 ~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--d~~s  260 (465)
T d1ax4a_         183 IVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYA--DALT  260 (465)
T ss_dssp             EEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGC--SEEE
T ss_pred             ccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEEEECcchhhhhcccccccccccccchhhhcccccccc--ceeE
Confidence            44555556666654 5688999999999999999999999998632211      00  111111    11111  1556


Q ss_pred             ecCccccCCCccceeEEEecccccccCCcchHHHHHhh----h-hhccCCcchHHHHHHHHhcccccHHHHHHHHHHHHH
Q 036024          113 SSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRI----I-CTCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKE  187 (272)
Q Consensus       113 ~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  187 (272)
                      .|.+|..+  +.+.|+++.++....      .......    . .......+.....++...+.....   +...++..+
T Consensus       261 ~s~~k~~~--~~~~g~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~---~~~~~~~~~  329 (465)
T d1ax4a_         261 MSAKKDPL--LNIGGLVAIRDNEEI------FTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIG  329 (465)
T ss_dssp             EETTSTTC--CSSCEEEEESSCHHH------HHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHH
T ss_pred             eecccCcc--cccceeEeecchHHH------HHhhhccccccccCCCcchhhHHHHHHHhhhhHHhhh---HHHHHHHHH
Confidence            66677664  444688888765421      1111111    1 111222233333333333322111   334455667


Q ss_pred             HHHHHHHHHHhCCCeEecCCCceEEEeecCC---------CChHHHHHHHHHhcCeEeeCCCCC--------C---CCCC
Q 036024          188 NTKILIDTLASLGIKVYGGINAPYVWAHFPG---------RKSWDVFAEILEKTHITTVPGSGF--------G---PGGE  247 (272)
Q Consensus       188 ~~~~l~~~L~~~g~~~~~~~~~~~~~i~l~~---------~~~~~~~~~ll~~~gi~v~~g~~~--------~---~~~~  247 (272)
                      +.+++.+.|++.|+.+..+.++..+.+....         .........++.+.||...+....        +   +...
T Consensus       330 ~~~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~  409 (465)
T d1ax4a_         330 QVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADM  409 (465)
T ss_dssp             HHHHHHHHHHHTTCCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSC
T ss_pred             HHHHHHHHHHhhcCccccCCCcceeeeehhhhcCCCccccchhHHHHHHHHHhcCceeccccccccccccccCCccCCCC
Confidence            7889999999999988887777777666531         123455677777889876432211        0   1124


Q ss_pred             CeEEEEc---cCCHHHHHHHHHHHHHh
Q 036024          248 EYIRISG---FGHRESILEASRRLEAL  271 (272)
Q Consensus       248 ~~~R~s~---~~~~~~i~~~l~~l~~~  271 (272)
                      +.+|+++   ..|+||++.+++.|+++
T Consensus       410 ~~vRlalP~~~~T~eeiD~vv~~l~~v  436 (465)
T d1ax4a_         410 EFMRLTIARRVYTNDHMDYIADALIGL  436 (465)
T ss_dssp             CEEEEECCTTSSCHHHHHHHHHHHHTT
T ss_pred             CceEEeCCCCCCCHHHHHHHHHHHHHH
Confidence            5899985   23899999999999875

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.29  E-value=1.4e-11  Score=102.71  Aligned_cols=236  Identities=12%  Similarity=0.038  Sum_probs=131.8

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccC-CCC-CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV   91 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~   91 (272)
                      +...++.+| .+..+..+......++ +++ +...+...   .+|.||...+   +.++.++|+++|+++++|.+.+.  
T Consensus       106 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~tg~~~~---~~~i~~~~~~~~al~~vDavss~--  177 (361)
T d2c0ra1         106 ALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAY---LHLTSNETIE---GAQFKAFPDTGSVPLIGDMSSDI--  177 (361)
T ss_dssp             HHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEEE---EEEESEETTT---TEECSSCCCCTTSCEEEECTTTT--
T ss_pred             hhhhhhhcCceeeeeccccccccchhhhhhhcccCcceE---EEEeccccee---cceEEEeeccCCceEEEEeeccc--
Confidence            556777788 7777777766555554 333 23333333   3567888877   66778899999999999999975  


Q ss_pred             cCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc-ch---HHHHHhhhhhccCCcchHHHHHHH
Q 036024           92 TDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF-PV---INDFNRIICTCFNGASNIAQAGGL  167 (272)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~a~~  167 (272)
                       ++.+..+..++      +.+.|.+|.++++|. .++++........... ..   ...+......... ++.....++.
T Consensus       178 -g~~~id~~~~d------i~~~s~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  248 (361)
T d2c0ra1         178 -LSRPFDLNQFG------LVYAGAQKNLGPSGV-TVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNT-PPSFGIYMVN  248 (361)
T ss_dssp             -TSSCCCGGGCS------EEEEETTTTTCCSSC-EEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSC-CCHHHHHHHH
T ss_pred             -cccccccccce------eEEEecccccccccC-cEEEEEhHHhhhCcccccccccccccccccccccc-ccceeeehhh
Confidence             33344444442      556678999987763 2333333322111000 00   1111111222222 2223222222


Q ss_pred             Hhcc-cccHHHHHHHHHHHHHHHHHHHHHHHhC-C-CeEecC---CCceEEEeecCCCChHHHHHHHHHhcCeEeeCCCC
Q 036024          168 ACLS-SEGLEAVHSVVDYYKENTKILIDTLASL-G-IKVYGG---INAPYVWAHFPGRKSWDVFAEILEKTHITTVPGSG  241 (272)
Q Consensus       168 ~~l~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g-~~~~~~---~~~~~~~i~l~~~~~~~~~~~ll~~~gi~v~~g~~  241 (272)
                      .... ...........++.++++..+.+..... . ......   .+...+.+.+++....+.+...|+++||.+.+|..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~~~~~~~~~~~~~~~~~~~L~~~GI~~~~G~~  328 (361)
T d2c0ra1         249 EVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEELEKEFVKASEQEGFVGLKGHR  328 (361)
T ss_dssp             HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHHHHHHHHHHHHHTTEESCBCCT
T ss_pred             hHHHhhhhccchHHHHHHHHHHHHHhhhhhhhcccccccCCChhhccceEEEEECCCcccHHHHHHHHHHCCCEEecCCC
Confidence            2222 1112333555566666666666666654 2 222221   12344666676422333445556777999988853


Q ss_pred             CCCCCCCeEEEEcc--CCHHHHHHHHHHHHHh
Q 036024          242 FGPGGEEYIRISGF--GHRESILEASRRLEAL  271 (272)
Q Consensus       242 ~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~  271 (272)
                      .    -+.+|+|++  .+.||++++++.|+++
T Consensus       329 ~----~g~~RIs~~~~~~~edv~~Lv~~l~~~  356 (361)
T d2c0ra1         329 S----VGGLRASIYNAVPYESCEALVQFMEHF  356 (361)
T ss_dssp             T----TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             c----CCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            2    134999964  4899999999999875

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.28  E-value=5.8e-10  Score=93.10  Aligned_cols=159  Identities=18%  Similarity=0.240  Sum_probs=106.2

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHH-cCCEEEEcccCCcccc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN-NGSIIIFDSAYAAYVT   92 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~-~~~~vi~D~~~~~~~~   92 (272)
                      +...+.+.| ++..+.......+.-.++  +++|+|++-+|.|||..+.+   ++++++.+++ +++++|+|..+.... 
T Consensus       115 ~~~~~~~~gi~~~~~d~~d~~~~~~~i~--~~t~lv~~Etp~NP~l~v~D---i~~~~~~~~~~~g~~vvvDnT~atP~-  188 (394)
T d1e5ea_         115 FEHALTKFGIQVDFINTAIPGEVKKHMK--PNTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPM-  188 (394)
T ss_dssp             HHTHHHHTTCEEEEECTTSTTHHHHHCC--TTEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTT-
T ss_pred             HHHHhhccceeeeccCCCCHHHHHHhhc--ccccEEEEeccCCcceeeeh---hhhhhhccccccCeEEEecCcccCcc-
Confidence            345667788 888888765544443343  68999999999999999987   7788876665 589999999987421 


Q ss_pred             CCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHh--hhhhccCCcchHHHHHHHHh
Q 036024           93 DGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNR--IICTCFNGASNIAQAGGLAC  169 (272)
Q Consensus        93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~  169 (272)
                         ......+..+    |++.|.+|.++ ....-.|.++++++.        ....+.  .+.......++....-+.  
T Consensus       189 ---~~~Pl~~GaD----iVvhS~TKy~~GhsDv~~G~v~~~~~~--------~~~~~~~~~~~~~G~~lsp~~a~ll~--  251 (394)
T d1e5ea_         189 ---ITNPVDFGVD----VVVHSATKYINGHTDVVAGLICGKADL--------LQQIRMVGIKDITGSVISPHDAWLIT--  251 (394)
T ss_dssp             ---TCCGGGGTCS----EEEEETTTTTTCSSCCCCEEEEECHHH--------HHHHHHTCCCCCCCCCCCHHHHHHHH--
T ss_pred             ---cCCchhcCCC----EEEechhhhcCCCcccccccccchhhH--------HHHHHHHHHHHhhCCCCChHHHHHHH--
Confidence               1122233222    99999999885 455556777777766        332221  222223334444333222  


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          170 LSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       170 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                         .+.+.+.-+.++..+++..+.+.|+++
T Consensus       252 ---rgl~TL~lRm~r~~~nA~~lA~~L~~h  278 (394)
T d1e5ea_         252 ---RGLSTLNIRMKAESENAMKVAEYLKSH  278 (394)
T ss_dssp             ---HHHTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             ---hhchhHHHHHHHHHHHHHHHHHHHhhc
Confidence               334556778899999999999999997

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.24  E-value=5.3e-11  Score=102.63  Aligned_cols=217  Identities=14%  Similarity=0.110  Sum_probs=122.7

Q ss_pred             CceEEEEecCCCcc-ccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC--------CCCCCccccC--CCCCceEEEe
Q 036024           45 RTDIIFFCSPNNPT-GHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD--------GCPRSIYEIP--GAREVAIEIS  113 (272)
Q Consensus        45 ~~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~--------~~~~~~~~~~--~~~~~~i~~~  113 (272)
                      .++++++.+.+|.. |.+++.+++++|.++|++||+++++|+++......        ....++....  -.....++..
T Consensus       183 ~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~~g~~l~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~  262 (467)
T d2v1pa1         183 NVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAM  262 (467)
T ss_dssp             GCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEE
T ss_pred             ccceeeecceeeccccccCCHHHHHHHHHHHHHcCCEEEEechhhhccccccccccccccCCcccccchhhcccCCEEEe
Confidence            45677777666654 67789999999999999999999999998632100        0011111110  0011226777


Q ss_pred             cCccccCCCccceeEEEecccccccCCcchHHHHHhhh---h--hccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHH
Q 036024          114 SFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRII---C--TCFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKEN  188 (272)
Q Consensus       114 s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  188 (272)
                      |.+|.++.+.  .|++..+++.+...    ........   .  ......+.....+....+.....   .+..++..++
T Consensus       263 s~~K~~~~~~--gg~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~  333 (467)
T d2v1pa1         263 SAKKDAMVPM--GGLLCMKDDSFFDV----YTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN---LDWLAYRIAQ  333 (467)
T ss_dssp             ESSSTTCCSS--CEEEEECSGGGHHH----HHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC---HHHHHHHHHH
T ss_pred             cCCCCCCCCC--ceeEEecchhhhhH----HHhhcccccccccCcchhhhHHHHHHHHHHHhHHhhh---HHHHHHHHHH
Confidence            8889886443  46666666553110    11111111   1  12222333333433333332222   3445566788


Q ss_pred             HHHHHHHHHhCCCeEecCCCceEEEee----cC-----CCChHHHHHHHHHhcCeEeeCCCCC-----------CCCCCC
Q 036024          189 TKILIDTLASLGIKVYGGINAPYVWAH----FP-----GRKSWDVFAEILEKTHITTVPGSGF-----------GPGGEE  248 (272)
Q Consensus       189 ~~~l~~~L~~~g~~~~~~~~~~~~~i~----l~-----~~~~~~~~~~ll~~~gi~v~~g~~~-----------~~~~~~  248 (272)
                      .+++.+.|.+.+..+.++ .+....+.    ++     ..........++.++||.......+           .+....
T Consensus       334 ~~~l~~~L~~~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~  412 (467)
T d2v1pa1         334 VQYLVDGLEEIGVVCQQA-GGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAE  412 (467)
T ss_dssp             HHHHHHHHHHTTCCEEEE-CSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCC
T ss_pred             HHHHHHHHHhcCCcccCC-CccceeecchhhcCCcchhhhhhHHHHHHHHHHcCCeeecccccccccccccCCccCCCcc
Confidence            899999999987766553 22222222    12     1223455667778889865322111           122356


Q ss_pred             eEEEEcc---CCHHHHHHHHHHHHHh
Q 036024          249 YIRISGF---GHRESILEASRRLEAL  271 (272)
Q Consensus       249 ~~R~s~~---~~~~~i~~~l~~l~~~  271 (272)
                      .+|+++.   .|+||+++++++|+++
T Consensus       413 ~vRlaip~~~~T~eeiD~vv~~l~~v  438 (467)
T d2v1pa1         413 LLRLTIPRATYTQTHMDFIIEAFKHV  438 (467)
T ss_dssp             EEEECCCTTTCCHHHHHHHHHHHHHH
T ss_pred             eEEEecCCCCCCHHHHHHHHHHHHHH
Confidence            8999862   3899999999998875

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.22  E-value=3e-09  Score=89.69  Aligned_cols=241  Identities=13%  Similarity=0.114  Sum_probs=147.1

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccccC
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVTD   93 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~~   93 (272)
                      ....++..| +++.++.+......  .+-.+++.++++.+|| -.|..   ++++++++++++.|.+++.|.--  ....
T Consensus       167 ~~t~a~~~g~~vv~v~~~~~~~~~--~~~~~~~Aavmi~~Pn-t~G~~---ed~~~i~~~~h~~G~l~~~~ad~--~al~  238 (437)
T d1wyua1         167 LRAYLEAVGAKLLTLPLEGGRTPL--PEVGEEVGAVVVQNPN-FLGAL---EDLGPFAEAAHGAGALFVAVADP--LSLG  238 (437)
T ss_dssp             HHHHHHHTTCEEEEECCBTTBCCC--CCCCTTEEEEEEESSC-TTSBC---CCHHHHHHHHHHTTCEEEEECCT--TGGG
T ss_pred             hhhhcccceeeEEeeecccccchh--hhhccceeEEEEcccc-ccccc---cchHHHHHHhhhccceEEeeech--hhhh
Confidence            344556788 99999886442222  2223688999999996 46877   35899999999999987766322  1212


Q ss_pred             CCCCCccccCCCCCceEEEecCccccCCC----ccceeEEEecccccccCCcchH--------------------HHHHh
Q 036024           94 GCPRSIYEIPGAREVAIEISSFSKFSGFT----GVRLGWTVVPEELLFSSGFPVI--------------------NDFNR  149 (272)
Q Consensus        94 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~r~G~~~~~~~~~~~~~~~~~--------------------~~~~~  149 (272)
                      . ..+..++..+    |++++ +|.||.|    |--.|++.+.+++.+..-.++.                    ..+++
T Consensus       239 ~-l~~Pg~~GaD----i~~g~-~q~fg~p~g~GGP~~G~~a~~~~l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrR  312 (437)
T d1wyua1         239 V-LKPPGAYGAD----IAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRR  312 (437)
T ss_dssp             T-BCCHHHHTCS----EEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHG
T ss_pred             c-cccccccccc----eEeec-cceeccccCCCcCccccccccchhhccccccccccccccCCcccceeecccccccccc
Confidence            1 2334444322    77777 6666533    3446888888877532111111                    11122


Q ss_pred             hhhhcc-CCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCce-EEEeecCCCChHHHHH
Q 036024          150 IICTCF-NGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGINAP-YVWAHFPGRKSWDVFA  226 (272)
Q Consensus       150 ~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~i~l~~~~~~~~~~  226 (272)
                      .+.+.. ++...+...++...+...+.+.+++..++...+++++.+.|.+. |+....+...+ -+.+.++ .+..++.+
T Consensus       313 ekatsnict~q~l~a~~a~~Y~~~lG~~GL~~ia~~a~~~A~yl~~~L~~~~g~~~~~~~~~f~ef~v~~~-~~~~~i~k  391 (437)
T d1wyua1         313 AKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALP-KDPEAVRR  391 (437)
T ss_dssp             GGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECS-SCHHHHHH
T ss_pred             cccccchhhHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHHHHHHhhhcCCeeccCCCCeeeEEEEECC-CCHHHHHH
Confidence            222222 22222222233334444556778999999999999999999987 88876543221 1344554 35677777


Q ss_pred             HHHHhcCeEeeCCCCCCCCCCCeEEEEcc--CCHHHHHHHHHHHHHhC
Q 036024          227 EILEKTHITTVPGSGFGPGGEEYIRISGF--GHRESILEASRRLEALF  272 (272)
Q Consensus       227 ~ll~~~gi~v~~g~~~~~~~~~~~R~s~~--~~~~~i~~~l~~l~~~l  272 (272)
                      +|++. |+... -..|.....+.+.+++.  .|++++++++++|+++|
T Consensus       392 ~L~d~-G~~~~-~~~~~~~~~~~lli~~TE~~tkeeiD~~v~al~eil  437 (437)
T d1wyua1         392 ALAER-GFHGA-TPVPREYGENLALFAATELHEEEDLLALREALKEVL  437 (437)
T ss_dssp             HHHHT-TCCCC-EECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             HHHhC-CCCCC-cccccCCCCCeEEEecCCCCCHHHHHHHHHHHHHhC
Confidence            77766 88531 11121223577889973  58999999999999875

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.21  E-value=1e-09  Score=91.45  Aligned_cols=158  Identities=13%  Similarity=0.171  Sum_probs=103.7

Q ss_pred             hHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHH----HcCCEEEEcccCCcc
Q 036024           16 EDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR----NNGSIIIFDSAYAAY   90 (272)
Q Consensus        16 ~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~----~~~~~vi~D~~~~~~   90 (272)
                      ...+.+.| ++..+..+.+ .+.--+  .+++++|++-+|.||+..+.+   +++|+++|+    ++|+++|+|..+...
T Consensus       111 ~~~l~~~gi~~~~~~~~~~-~~~~~i--~~~t~lv~~EspsNP~l~v~D---i~~ia~~a~~~~~~~g~~lvVDnT~atP  184 (393)
T d1n8pa_         111 TKVANAHGVETSFTNDLLN-DLPQLI--KENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSP  184 (393)
T ss_dssp             HHTSTTTCSCCEEESSHHH-HHHHHS--CSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHH
T ss_pred             hhhhhcccceeEEeecchH-HHHHHh--hhhcceeEecCcchhhhhccc---hhhhhhhhhhhcccCCceEEEecCccCc
Confidence            34556677 6666653221 121112  379999999999999999988   788888877    678999999999742


Q ss_pred             ccCCCCCCccccCCCCCceEEEecCccccC-CCccceeEEEecccccccCCcchHHHHHhhhhhccCCcchHHHHHHHHh
Q 036024           91 VTDGCPRSIYEIPGAREVAIEISSFSKFSG-FTGVRLGWTVVPEELLFSSGFPVINDFNRIICTCFNGASNIAQAGGLAC  169 (272)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  169 (272)
                      ...   .+ ..+..  |  |++.|++|.++ ....-.|.++.+++.+       .+.+...+.......++.....+.  
T Consensus       185 ~~~---~P-l~~GA--D--iVvhS~TKyi~GhsDv~~G~v~~~~~~~-------~~~l~~~~~~~G~~~~p~~a~ll~--  247 (393)
T d1n8pa_         185 YIS---NP-LNFGA--D--IVVHSATKYINGHSDVVLGVLATNNKPL-------YERLQFLQNAIGAIPSPFDAWLTH--  247 (393)
T ss_dssp             HHC---CG-GGGTC--S--EEEEETTTTTTCSSCCCCEEEEESCHHH-------HHHHHHHHHHHCCCCCHHHHHHHH--
T ss_pred             ccC---Cc-hhhCC--C--EEEEccccccCCCCccccceeeecchhH-------HHHHHHHHhhcCCCCChHHHHHHH--
Confidence            211   12 22322  2  99999999885 4556678777665542       445555554444445555433333  


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHhC
Q 036024          170 LSSEGLEAVHSVVDYYKENTKILIDTLASL  199 (272)
Q Consensus       170 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  199 (272)
                         .+.+.+..+.++..+++..+.+.|+..
T Consensus       248 ---rgl~Tl~lR~~~~~~nA~~lA~~L~~~  274 (393)
T d1n8pa_         248 ---RGLKTLHLRVRQAALSANKIAEFLAAD  274 (393)
T ss_dssp             ---HHHTTHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             ---hCCcchhhHHHHHHHHHHHHHHHHHhc
Confidence               333455778889999999999999754

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.15  E-value=2.5e-10  Score=94.52  Aligned_cols=237  Identities=11%  Similarity=0.008  Sum_probs=131.9

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccC-CC--CCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPD-LK--GTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAY   90 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~--~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~   90 (272)
                      +....+..| .++.....++...... ++  ..++++++++++.+|-||...+   .+.+.  ++.+++.+++|.+.+. 
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~t~~~~~---~~~i~--~~~~~~~v~vDa~~~~-  177 (360)
T d1bjna_         104 AIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIA---IDETP--DFGADVVVAADFSSTI-  177 (360)
T ss_dssp             HHHHHTTTSEEEEEECEEEETTEEEECCGGGCCCCSSCSCEEECSEETTTTEE---CCCCC--CCCTTCCEEEECTTTT-
T ss_pred             hHHHHhhcCccceeeccccCCCcchhhhhhhhccCCceeEEEecccccccCcc---cccee--cccccceeeeeeeccc-
Confidence            445556666 5555555544333222 11  2477888888888899998866   33333  4567899999988764 


Q ss_pred             ccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccC-CcchHHHHHhhh--hhccCCcchHHHHHHH
Q 036024           91 VTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSS-GFPVINDFNRII--CTCFNGASNIAQAGGL  167 (272)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~a~~  167 (272)
                        .+.+.....+    |  +.+.|.+|.+++|+. .|.++..+...... .......+....  ......+.......+.
T Consensus       178 --~~~~vd~~~~----d--v~~~ss~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (360)
T d1bjna_         178 --LSRPIDVSRY----G--VIYAGAQKNIGPAGL-TIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSG  248 (360)
T ss_dssp             --TSSCCCGGGC----S--EEEEETTTTTSSTTC-EEEEEEGGGCSCCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHH
T ss_pred             --cceeeeeccc----e--eEEEEcccccccCCC-ceeEeeehhhhhccccCCcchhhHHHHhhhhhccccccchHHHHH
Confidence              2222222222    1  777888999985543 34444444332211 111111111111  1122223333332222


Q ss_pred             Hhcc-cccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCC----CceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCC
Q 036024          168 ACLS-SEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGI----NAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSG  241 (272)
Q Consensus       168 ~~l~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~  241 (272)
                      .... .......+...++.++......+.+...+.....+.    ....+.+.+++ ....++. .++++.||.+..|..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~f~~~~~~~~~~~~-~~l~~~Gi~~~~G~~  327 (360)
T d1bjna_         249 LVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSALDKLFL-EESFAAGLHALKGHR  327 (360)
T ss_dssp             HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGBCSSEEEEEESSGGGHHHHH-HHHHHTTEECCBCCT
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhccccccccCCcccccceEEEEEcCCcccHHHHH-HHHHHCCCEeecCCC
Confidence            2222 122234466667777777777777777754443221    22356677764 4444544 455667999988753


Q ss_pred             CCCCCCCeEEEEc--cCCHHHHHHHHHHHHHh
Q 036024          242 FGPGGEEYIRISG--FGHRESILEASRRLEAL  271 (272)
Q Consensus       242 ~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~  271 (272)
                      .    -+.+|+|+  ++++||++++++.|+++
T Consensus       328 ~----~g~~Ris~~~~~t~edV~~li~~l~e~  355 (360)
T d1bjna_         328 V----VGGMRASIYNAMPLEGVKALTDFMVEF  355 (360)
T ss_dssp             T----TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             c----cCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            2    23599996  45899999999999875

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.14  E-value=3.2e-09  Score=88.50  Aligned_cols=241  Identities=15%  Similarity=0.050  Sum_probs=139.5

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++.+.++. ....+...| +.+.++++++ .+.+|++.     .+++++|+++|   ..|...+   +++|.++|++
T Consensus        72 deVi~~~~~~~~~~~ai~~~g~~pv~~d~~~~-~~~~d~~~l~~~i~~~tkaIi~~h---~~G~~~~---~~~i~~i~~~  144 (376)
T d1mdoa_          72 DEVITPSMTWVSTLNMIVLLGANPVMVDVDRD-TLMVTPEHIEAAITPQTKAIIPVH---YAGAPAD---LDAIYALGER  144 (376)
T ss_dssp             CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEECCBC---GGGCCCC---HHHHHHHHHH
T ss_pred             CEEEEecccccccccchhccccceeeeccccc-ccCCCHHHHHHhcCCCCeEEEEeC---CCCCccc---hhHHHHHHHh
Confidence            55666665555 556667777 9999999877 66677554     37899998864   5687665   8899999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhhc--
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICTC--  154 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--  154 (272)
                      +|+++|+|.+++....-. ....    +..+..++-...+|.++.++  .|.++++++.+       .+.+.......  
T Consensus       145 ~~i~vIeD~a~a~g~~~~-~~~~----g~~g~~~~Sf~~~K~l~~g~--GG~i~t~~~~l-------~~~~~~~~~~g~~  210 (376)
T d1mdoa_         145 YGIPVIEDAAHATGTSYK-GRHI----GARGTAIFSFHAIKNITCAE--GGIVVTDNPQF-------ADKLRSLKFHGLG  210 (376)
T ss_dssp             HTCCBCEECTTCTTCEET-TEET----TSSSEEEEECCTTSSSCSSS--CEEEEESCHHH-------HHHHHHHTBTTEE
T ss_pred             cCceEEeccchhccCeeC-Ceec----ccccCccccCCCcCCCCCCC--CCEEEEechhH-------HHHHHhhcccCCc
Confidence            999999999998533211 1111    11222244344469886332  57777777663       33332222111  


Q ss_pred             ----------------------cCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCe-EecCCC---
Q 036024          155 ----------------------FNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIK-VYGGIN---  208 (272)
Q Consensus       155 ----------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~---  208 (272)
                                            ....+.  ..|+....+   ...+++..++.+++++++.+.|.+.... ......   
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~g~n~~~~~--~~Aai~~~q---L~~~~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~  285 (376)
T d1mdoa_         211 VDAWDRQSGGRAPQAEVLAPGYKYNLPD--LNAAIALAQ---LQKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHI  285 (376)
T ss_dssp             CC-----------CCEESSCCCBCCCCH--HHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEE
T ss_pred             ccccccccccccccccchhcccccccch--hhhhhhhhh---hhhhhHHHHHHhhhhhhhhhhccccccccccccccccc
Confidence                                  111111  122222222   2334566677788888999999887433 322211   


Q ss_pred             -ce-EEEeecC----CCChHHHHHHHHHhcCeEeeCCCCC----------CCCC---------CCeEEEEcc--CCHHHH
Q 036024          209 -AP-YVWAHFP----GRKSWDVFAEILEKTHITTVPGSGF----------GPGG---------EEYIRISGF--GHRESI  261 (272)
Q Consensus       209 -~~-~~~i~l~----~~~~~~~~~~ll~~~gi~v~~g~~~----------~~~~---------~~~~R~s~~--~~~~~i  261 (272)
                       .+ ...+.+.    .....++...| ++.||.+++....          ...+         ...+.+.++  .+++|+
T Consensus       286 ~~~~~~~~~~~~~~~~~~Rd~l~~~L-~~~gI~~~~~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei  364 (376)
T d1mdoa_         286 HAWHLFIIRVDEARCGITRDALMASL-KTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDF  364 (376)
T ss_dssp             CCCSCEEEECCHHHHSSCHHHHHHHH-HHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHH
T ss_pred             ccccccccccccccchhhHHHHHHHH-HHCCCCeeeECcchhcCHHHHhhCCCCCCHHHHHHHhCEEEccCCCCCCHHHH
Confidence             11 1222222    22334555555 5559988643210          0000         345666553  389999


Q ss_pred             HHHHHHHHHh
Q 036024          262 LEASRRLEAL  271 (272)
Q Consensus       262 ~~~l~~l~~~  271 (272)
                      ++.++.|+++
T Consensus       365 ~~I~~~i~~i  374 (376)
T d1mdoa_         365 DRVITALHQI  374 (376)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999886

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.08  E-value=1.8e-10  Score=95.67  Aligned_cols=236  Identities=11%  Similarity=0.001  Sum_probs=120.8

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccC-CCC-CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCccc
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPD-LKG-TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYV   91 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~   91 (272)
                      +...+...+ ..+...........++ ++. ....+.   ++-+|.||...+   +++|.++|+++|+++++|.+.+.  
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~tg~~~~---~~~i~~~~~~~g~l~ivDavqs~--  177 (360)
T d1w23a_         106 ALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNEND---AYLHITSNNTIY---GTQYQNFPEINHAPLIADMSSDI--  177 (360)
T ss_dssp             HHHHHHTTSEEEEEEECGGGTSCSCCCGGGCCCCTTE---EEEEEESEETTT---TEECSSCCCCCSSCEEEECTTTT--
T ss_pred             hHHHHHHhhhcceeeccccccccchhhhhhccccccc---ceeEecCCcccc---ceeeeeccccceeeEEeeccccc--
Confidence            445555666 4444444433233333 222 223333   344667888877   78889999999999999999985  


Q ss_pred             cCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCc-chHHHHHh--hhhhccCCcchHHHHHHHH
Q 036024           92 TDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGF-PVINDFNR--IICTCFNGASNIAQAGGLA  168 (272)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~a~~~  168 (272)
                       ++.+..+..++      +...+++|..+++|. .|+++..+........ .....+..  ........+......+...
T Consensus       178 -g~~~id~~~~~------vd~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (360)
T d1w23a_         178 -LSRPLKVNQFG------MIYAGAQKNLGPSGV-TVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRN  249 (360)
T ss_dssp             -TSSCCCGGGCS------EEEEETTTTTSCTTC-EEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHH
T ss_pred             -ccccccccccc------ceEEeeccccccCCc-ceeeEechhhhcccccCCcchhhhhhhhhhhhcccccceeeechhH
Confidence             22233444442      445566776664442 4444443333211110 00111111  1111222233333332322


Q ss_pred             hcccccH-HHHHHHHHHHHHHHHHHHHHHHhC-CCeEec----CCCceEEEeecCC-CChHHHHHHHHHhcCeEeeCCCC
Q 036024          169 CLSSEGL-EAVHSVVDYYKENTKILIDTLASL-GIKVYG----GINAPYVWAHFPG-RKSWDVFAEILEKTHITTVPGSG  241 (272)
Q Consensus       169 ~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~----~~~~~~~~i~l~~-~~~~~~~~~ll~~~gi~v~~g~~  241 (272)
                      .+..... .......++.+.+........... ......    ..+...+.+.+++ ....++. ..+.++||.+..|..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~vvsf~i~~~~~~~~~~-~~l~~~GI~~~~G~~  328 (360)
T d1w23a_         250 VLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELNQQFL-AKAKEQGFVGLNGHR  328 (360)
T ss_dssp             HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHHHHHHHH-HHHHHTTEESCBCCT
T ss_pred             HHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhcccccccCCChhhcceeEEEEEcCCCccHHHHH-HHHHHCCCeeeeCCC
Confidence            2221111 122333344444444444444443 222211    1123356677764 3334555 455666999988865


Q ss_pred             CCCCCCCeEEEEccC--CHHHHHHHHHHHHHh
Q 036024          242 FGPGGEEYIRISGFG--HRESILEASRRLEAL  271 (272)
Q Consensus       242 ~~~~~~~~~R~s~~~--~~~~i~~~l~~l~~~  271 (272)
                      +.    +.+|+|+++  |.||++.+++.|+++
T Consensus       329 ~~----ggiRiS~~~~~t~e~V~~Li~~~~~~  356 (360)
T d1w23a_         329 SV----GGCRASIYNAVPIDACIALRELMIQF  356 (360)
T ss_dssp             TT----CSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cc----CcEEEEeeCCCCHHHHHHHHHHHHHH
Confidence            42    359999755  999999999998875

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=98.92  E-value=7.2e-08  Score=82.08  Aligned_cols=244  Identities=15%  Similarity=0.115  Sum_probs=143.7

Q ss_pred             HHhcccc-eeEEeecCCCCCcccC---CCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEEEcccCCcccc
Q 036024           17 DEVGKYC-NIEYLECGPGNNFFPD---LKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIFDSAYAAYVT   92 (272)
Q Consensus        17 ~~~~~~g-~~~~~~~~~~~~~~~d---l~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~D~~~~~~~~   92 (272)
                      ......+ .++.++.+..+....+   .....++.++++.+|+++.+..   +..+++++++++.+..+++|.+......
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~v~~p~~~g~~e---~~~~~~~~~~h~~g~~~~~~~~~~~~~~  246 (471)
T d1wyub1         170 ATASMAGYQVREIPSGPEGEVDLEALKRELGPHVAALMLTNPNTLGLFE---RRILEISRLCKEAGVQLYYDGANLNAIM  246 (471)
T ss_dssp             HHHHHTTCEEEEECBCTTSSBCHHHHHHHCSTTEEEEEECSSCTTSCCC---TTHHHHHHHHHHHTCEEEEEGGGGGGTT
T ss_pred             eeeecccceeecccccccccccchhhhhhhhccccceeeccCCCccccc---chhhhhHHHHHhccccccccccchhhhh
Confidence            3334444 6666666544333333   1113667788888998776554   3477888888899988888866543222


Q ss_pred             CCCCCCccccCCCCCceEEEecCccccCC----CccceeEEEecccccccCCcchHH-----------HHHhhhhhccCC
Q 036024           93 DGCPRSIYEIPGAREVAIEISSFSKFSGF----TGVRLGWTVVPEELLFSSGFPVIN-----------DFNRIICTCFNG  157 (272)
Q Consensus        93 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~r~G~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~  157 (272)
                      .  ..+.....++    +++...++.+|.    .|--+|++.+.+++++..=-++..           +-...+....++
T Consensus       247 ~--l~~p~~~g~d----iv~vg~~q~~G~P~~~GGP~~G~~a~~~~~~R~~PGRiV~~~~~~~~~~~~REqhIrRe~act  320 (471)
T d1wyub1         247 G--WARPGDMGFD----VVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFY  320 (471)
T ss_dssp             T--TCCHHHHTCS----EEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTT
T ss_pred             h--ccccCccccc----ccccccccccccccccccccccceeehhhhhccCCCceecCCCccccccCCCcccccchhhhh
Confidence            1  1122222221    444455665543    344578888888875321111100           000011111122


Q ss_pred             cchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCceE--EEeecC-CCChHHHHHHHHHhcCe
Q 036024          158 ASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASLGIKVYGGINAPY--VWAHFP-GRKSWDVFAEILEKTHI  234 (272)
Q Consensus       158 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~--~~i~l~-~~~~~~~~~~ll~~~gi  234 (272)
                      ...+...++...+..-+.+.+++..++..+++.++.+.|+..|+++..+ +..|  +.+.++ +....++.++|++. |+
T Consensus       321 nqaL~al~A~vYlsllG~~GL~elA~~~~~~A~Yla~~L~~~G~~~~~~-~~ff~EFvv~~~~~~~~~~i~k~L~~~-G~  398 (471)
T d1wyub1         321 GNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKGYRVPYD-GPSMHEFVAQPPEGFRALDLAKGLLEL-GF  398 (471)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSC-SSCCSCEEEBCSTTCCHHHHHHHHHHT-TC
T ss_pred             hhHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHhhcCceeccC-cceeeEEeecCCCCCCHHHHHHHHHHc-CC
Confidence            2233333333344446668889999999999999999998889887543 2222  455665 44566777888776 88


Q ss_pred             EeeCCCCCCCCCCCeEEEEc--cCCHHHHHHHHHHHHHhC
Q 036024          235 TTVPGSGFGPGGEEYIRISG--FGHRESILEASRRLEALF  272 (272)
Q Consensus       235 ~v~~g~~~~~~~~~~~R~s~--~~~~~~i~~~l~~l~~~l  272 (272)
                      .- +...|....++.+-++.  ..|++|||+++++|++++
T Consensus       399 ~~-~~~~~p~~~~~~llv~vTE~~tkedID~lv~aL~~i~  437 (471)
T d1wyub1         399 HP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALL  437 (471)
T ss_dssp             CC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHH
T ss_pred             CC-CcccCcCCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Confidence            54 32333333466777887  358999999999998763

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=98.86  E-value=2.9e-07  Score=76.70  Aligned_cols=241  Identities=13%  Similarity=0.116  Sum_probs=138.7

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCcccCCCC-----CCCceEEEEecCCCccccCCCHHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPDLKG-----TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARN   76 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~dl~~-----~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~   76 (272)
                      |.|++++.++. ....+...| +++.++.+++ .+.+|++.     .+++++|+++   +..|...+   ++++.++|++
T Consensus        75 deVi~p~~t~~a~~~ai~~~g~~p~~~d~~~~-~~~~d~~~~~~~i~~~tk~i~~~---~~~g~~~d---~~~i~~~~~~  147 (384)
T d1b9ha_          75 TEVIVPAFTFISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIMPV---HMAGLMAD---MDALAKISAD  147 (384)
T ss_dssp             CEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC---HHHHHHHHHH
T ss_pred             CEEEEecccccccccccccccccccccccccc-ccccchhhhcccccccccccccc---cccccccc---cccchhhhhh
Confidence            56666665555 556666777 9999998866 56667543     4788888665   45565544   8899999999


Q ss_pred             cCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecCccccCCCccceeEEEecccccccCCcchHHHHHhhhhh---
Q 036024           77 NGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSFSKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT---  153 (272)
Q Consensus        77 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~---  153 (272)
                      +++.+|+|.+++.+..-. ...+...   .+..++-.+.+|.++. | ..|.++++++.+       ...+...+..   
T Consensus       148 ~~i~lieD~a~a~ga~~~-g~~~g~~---g~~~~~Sf~~~K~i~~-g-~GG~i~t~~~~~-------~~~~~~~~~~g~~  214 (384)
T d1b9ha_         148 TGVPLLQDAAHAHGARWQ-GKRVGEL---DSIATFSFQNGKLMTA-G-EGGAVVFPDGET-------EKYETAFLRHSCG  214 (384)
T ss_dssp             HTCCBCEECTTCTTCEET-TEEGGGS---SSCEEEECCTTSSSCS-S-SCEEEEECTTCH-------HHHHHHHHHTBTT
T ss_pred             hhhhhhhhhceecccccC-CEecCcc---cccceecccccccccc-c-ccchhhhhhHHH-------HHHHHHHHhcCCC
Confidence            999999999998644221 1222222   2323444555798863 3 257777776653       2333322211   


Q ss_pred             --------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC-----C-ceEE
Q 036024          154 --------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI-----N-APYV  212 (272)
Q Consensus       154 --------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-----~-~~~~  212 (272)
                                    .....+.+ |+ +....+   .+.+++..++-+++.+++.+.|++. ++......     . .++.
T Consensus       215 ~~~~~~~~~~~~~G~n~rms~l-~A-aig~~q---L~~ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~  289 (384)
T d1b9ha_         215 RPRDDRRYFHKIAGSNMRLNEF-SA-SVLRAQ---LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMA  289 (384)
T ss_dssp             CCTTCSSCCCCSCCCBCBCBHH-HH-HHHHHH---HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEE
T ss_pred             Cccccccccccccccccccccc-hh-hhhhhh---hhhcccchhhhhhhhhhhhhhhhcccccccccccccccccccccc
Confidence                          11112223 22 222222   1234556666677888888889886 55432211     1 2234


Q ss_pred             EeecCCCChH---HHHHHHHHhcCeEeeCCCCCCCC-------------C----------------CCeEEEEccC--C-
Q 036024          213 WAHFPGRKSW---DVFAEILEKTHITTVPGSGFGPG-------------G----------------EEYIRISGFG--H-  257 (272)
Q Consensus       213 ~i~l~~~~~~---~~~~~ll~~~gi~v~~g~~~~~~-------------~----------------~~~~R~s~~~--~-  257 (272)
                      .+.++.....   ++...| ++.||.+.+.  |.+.             .                ...+.+.+..  + 
T Consensus       290 ~~~~~~~~~~~Rd~l~~~L-~~~GI~~~~~--y~plh~~~~~~~~~~~~~~~~~~~~~~Pna~~l~~~~l~LP~~~~Lt~  366 (384)
T d1b9ha_         290 MFRIPGLTEERRNALVDRL-VEAGLPAFAA--FRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAG  366 (384)
T ss_dssp             EEECTTCCHHHHHHHHHHH-HHTTCCEEEC--CCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSC
T ss_pred             cceecccccccHHHHHHHH-HHCCCCeeee--CcchhcCHHHHhcCCCcccccccccCCHHHHHHHhCEEEccCCCCCCC
Confidence            4555533322   345555 5569988653  2210             0                1346666533  5 


Q ss_pred             HHHHHHHHHHHHHhC
Q 036024          258 RESILEASRRLEALF  272 (272)
Q Consensus       258 ~~~i~~~l~~l~~~l  272 (272)
                      ++|++...+.|++++
T Consensus       367 e~ei~~I~~~i~~~l  381 (384)
T d1b9ha_         367 EPELHATAEIIADAV  381 (384)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            578999998888763

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=98.74  E-value=1.3e-06  Score=72.32  Aligned_cols=238  Identities=12%  Similarity=0.005  Sum_probs=132.3

Q ss_pred             ccccccCccc-chHHhcccc-eeEEeecCCCCCcccC-CCC--CCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCC
Q 036024            5 SSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNFFPD-LKG--TSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGS   79 (272)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~d-l~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~   79 (272)
                      .|++++-++. -...+...| +++.++.+++....++ ++.  .+++++|++++   .-|...+   +++|.++|+++++
T Consensus        75 eVi~p~~t~~a~~~ai~~~G~~pv~vDi~~~~~~~~~~~~~~~~~~t~avi~vh---~~G~~~~---~~~i~~~~~~~~i  148 (371)
T d2fnua1          75 EIITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVD---YAGKSVE---VESVQKLCKKHSL  148 (371)
T ss_dssp             EEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEEC---GGGCCCC---HHHHHHHHHHHTC
T ss_pred             eeecccccccccceeeeccCcccccccccccccccchhhhhhccchhhcccccc---ccccccc---cccccccccccch
Confidence            4666654444 445556677 9999999877543322 222  47899988874   4466655   8899999999999


Q ss_pred             EEEEcccCCccccCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEecccccccCCcchHHHHHhhhhh----
Q 036024           80 IIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVPEELLFSSGFPVINDFNRIICT----  153 (272)
Q Consensus        80 ~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~----  153 (272)
                      .+|+|.+++...... .......   .+  +.+.||  +|.++..+  .|.++++++..       .+.+......    
T Consensus       149 ~lIEDaaqa~Ga~~~-~~~~G~~---g~--~~~~Sf~~~K~l~~g~--GG~i~t~~~~~-------~~~~~~~~~~g~~~  213 (371)
T d2fnua1         149 SFLSDSSHALGSEYQ-NKKVGGF---AL--ASVFSFHAIKPITTAE--GGAVVTNDSEL-------HEKMKLFRSHGMLK  213 (371)
T ss_dssp             EEEEECTTCTTCEET-TEETTSS---SS--EEEEECCTTSSSCCSS--CEEEEESCHHH-------HHHHHHHTBTTEEE
T ss_pred             hhccchhhccCceec-cccCCcc---cc--cccccccccccccccc--ceEEEeechhh-------hhhccccccccccc
Confidence            999999998643221 1111122   22  444455  79887433  58878777553       3333333211    


Q ss_pred             ------------ccCCcchHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEecCC----Cc-eEEEee
Q 036024          154 ------------CFNGASNIAQAGGLACLSSEGLEAVHSVVDYYKENTKILIDTLASL-GIKVYGGI----NA-PYVWAH  215 (272)
Q Consensus       154 ------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~~-~~~~i~  215 (272)
                                  .....+.+....+..-+     +.+++..++-+++.+.+.+.|++. ++....+.    .. ....+.
T Consensus       214 ~~~~~~~~~~~G~n~r~sel~Aaigl~qL-----~~l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~  288 (371)
T d2fnua1         214 KDFFEGEVKSIGHNFRLNEIQSALGLSQL-----KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPIL  288 (371)
T ss_dssp             SSSSCEEESSCCCBCCCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEE
T ss_pred             ccccccccccccccccccchhhhhhhhhh-----hhccchhhhhhhhhhhhccccccccccccccccccccccccccccc
Confidence                        11112222222222222     223445555556667777888776 44443211    11 223333


Q ss_pred             cCC--CCh-HHHHHHHHHhcCeEeeCCCCCCC------------CC---------CCeEEEEcc--CCHHHHHHHHHHHH
Q 036024          216 FPG--RKS-WDVFAEILEKTHITTVPGSGFGP------------GG---------EEYIRISGF--GHRESILEASRRLE  269 (272)
Q Consensus       216 l~~--~~~-~~~~~~ll~~~gi~v~~g~~~~~------------~~---------~~~~R~s~~--~~~~~i~~~l~~l~  269 (272)
                      +..  ... .++...| ++.||.+.+..  .|            .+         ...+.+.++  .+++|++..++.+.
T Consensus       289 ~~~~~~~~r~~~~~~L-~~~gI~~~~~y--~pl~~~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~  365 (371)
T d2fnua1         289 MHQKFFTCKKLILESL-HKRGILAQVHY--KPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVL  365 (371)
T ss_dssp             ECGGGGGGHHHHHHHH-HHTTEECBCCC--CCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             ccccchhHHHHHHHHH-HHCCCCcceeC--cccccCHHHHhccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHHHHHH
Confidence            332  122 3444554 55699987542  22            11         134555543  38999999888887


Q ss_pred             Hh
Q 036024          270 AL  271 (272)
Q Consensus       270 ~~  271 (272)
                      ++
T Consensus       366 ~~  367 (371)
T d2fnua1         366 KT  367 (371)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=98.53  E-value=3.1e-06  Score=69.97  Aligned_cols=118  Identities=16%  Similarity=0.182  Sum_probs=75.0

Q ss_pred             cccccccCccc-chHHhcccc-eeEEeecCCCCCc-ccCC-----CCCCCceEEEEecCCCccccCCCHHHHHHHHHHHH
Q 036024            4 DSSVIVGQAGD-LEDEVGKYC-NIEYLECGPGNNF-FPDL-----KGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFAR   75 (272)
Q Consensus         4 d~~~~~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~-~~dl-----~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~   75 (272)
                      |.|++++-++. -...+...| +++.+.++++... .++.     ...++++++++++.   .|...+   ++++.++|+
T Consensus        62 deVi~p~~t~~a~~~~~~~~g~~pv~~Di~~~~~~~~~~~~~~~~~~~~~~~aii~~~~---~G~~~d---~~~i~~~~~  135 (374)
T d1o69a_          62 DIVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTHL---YGNAAK---MDEIVEICK  135 (374)
T ss_dssp             CEEEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEECG---GGCCCC---HHHHHHHHH
T ss_pred             CEEEeCCcchHhhHHHHhhccceeEecccccccccccccccccchhccccccccccccc---ccchhh---hHHHHHHhh
Confidence            56666665444 445667777 9999998865322 2221     12478889888755   355544   899999999


Q ss_pred             HcCCEEEEcccCCccccCCCCCCccccCCCCCceEEEecC--ccccCCCccceeEEEecccc
Q 036024           76 NNGSIIIFDSAYAAYVTDGCPRSIYEIPGAREVAIEISSF--SKFSGFTGVRLGWTVVPEEL  135 (272)
Q Consensus        76 ~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~r~G~~~~~~~~  135 (272)
                      +++++||+|.+++....-. ...+...   .+  +.+.||  +|.++..|  .|.+++.++.
T Consensus       136 ~~~i~vIED~a~a~g~~~~-~~~~G~~---gd--~~~fSf~~~K~l~tge--GG~i~tnn~~  189 (374)
T d1o69a_         136 ENDIVLIEDAAEALGSFYK-NKALGTF---GE--FGVYSYNGNKIITTSG--GGMLIGKNKE  189 (374)
T ss_dssp             HTTCEEEEECTTCTTCEET-TEETTSS---SS--EEEEECCTTSSSCCSS--CEEEEESCHH
T ss_pred             ccCcchhhhhhhhhcceEC-CeecCCC---Cc--eEEEeccCcccccccc--ceeehhhhHH
Confidence            9999999999998633211 1122222   23  455555  59887444  4777776655

>d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-N-acetylhexosaminidase catalytic domain
domain: beta-hexosaminidase A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.12  E-value=0.5  Score=37.61  Aligned_cols=65  Identities=17%  Similarity=0.118  Sum_probs=50.4

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEEEEecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDIIFFCSPNNPTGHAATQNQLEQLVEFARNNGSIII   82 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi   82 (272)
                      +.+..+.++ ++..+++.++.+|.++++..|...-   ...-+|.+..++++++++|++-|+++++-||
T Consensus        23 ~id~ma~~K~N~lhlHltD~~~~r~e~~~~p~l~~---~ga~~~~~~~yT~~d~~elv~yA~~rgI~vI   88 (362)
T d2gjxa1          23 TLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMR---KGSYNPVTHIYTAQDVKEVIEYARLRGIRVL   88 (362)
T ss_dssp             HHHHHHHTTCCEEEEECCCSSCCCBCCSSCTHHHH---HHSSCTTTSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred             HHHHHHHcCCcEEEEEEEcCCCceeccCCCchhhh---cCCcCCCCCccCHHHHHHHHHHHHHcCCEEE
Confidence            345567788 8899999999999998776554210   1123566778999999999999999999999

>d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-N-acetylhexosaminidase catalytic domain
domain: Dispersin B, DspB
species: Actinobacillus actinomycetemcomitans [TaxId: 714]

Probab=83.34  E-value=0.7  Score=36.37  Aligned_cols=67  Identities=15%  Similarity=0.144  Sum_probs=47.9

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCce---EEEE----ecCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTD---IIFF----CSPNNPTGHAATQNQLEQLVEFARNNGSIII   82 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~---~i~~----~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi   82 (272)
                      +.+..+.++ ++..+++.++.+|.++++..+...   +.--    ..| ...+..++++++++|++-|+++++-||
T Consensus        23 ~id~ma~~K~N~lhlHltDdq~~~le~~~~p~l~~~~~~~~~~~~~~~-~~~~~~yt~~e~~~lv~yA~~rgI~vi   97 (344)
T d1yhta1          23 FIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIYINP-YTGKPFLSYRQLDDIKAYAKAKGIELI   97 (344)
T ss_dssp             HHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCEECT-TTCCEEBCHHHHHHHHHHHHHTTCEEE
T ss_pred             HHHHHHHcCCcEEEEEeecCCCceecccCCchhhhhccccCCCCCCCC-CCCCcccCHHHHHHHHHHHHHcCCEEE
Confidence            445667788 888999999999999866644321   1100    112 223456899999999999999999988

>d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-N-acetylhexosaminidase catalytic domain
domain: beta-N-acetylhexosaminidase
species: Streptomyces plicatus [TaxId: 1922]

Probab=82.66  E-value=1  Score=35.59  Aligned_cols=69  Identities=14%  Similarity=0.116  Sum_probs=48.4

Q ss_pred             chHHhcccc-eeEEeecCCCCCcccCCCCCCCceEE-EEecCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 036024           15 LEDEVGKYC-NIEYLECGPGNNFFPDLKGTSRTDII-FFCSPNNPTGHAATQNQLEQLVEFARNNGSIIIF   83 (272)
Q Consensus        15 ~~~~~~~~g-~~~~~~~~~~~~~~~dl~~~~~~~~i-~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~vi~   83 (272)
                      +.+..+.+. ++..+++.++.+|.++++..|+.... .-.......|..++++++++|++-|+++++.||-
T Consensus        23 ~id~ma~~K~N~lh~Hl~D~~~~r~e~~~~p~l~~~ga~~~~~~~~~~~yT~~di~~iv~ya~~rgI~viP   93 (356)
T d1jaka1          23 YIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEIVRYAASRHLEVVP   93 (356)
T ss_dssp             HHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHcCCeEEEEEEecCCCcceeecCCchhhhccCccccCCCCCCccCHHHHHHHHHHHHHcCCeEee
Confidence            345567778 89999999999999887764432100 0011112335579999999999999999999983