Citrus Sinensis ID: 036042

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-
Protein Sequence
MVPDIAFGHSTRVVFDVDCGVANFEPVYGDGKIRVEQWKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACITEVQNCQRMIMDLIIQHGLHAFMIHLTGLRV
Secondary Structure (PSIPRED)
ccccccccccEEEEEEccccccccccccccccccHHHHHHHHHHcccEEEEEccccccHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHcHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccEEEcccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHcccccccccccccccccccccccHHHccccccHHHHHHHHHHHHcccHEEEEEEccccc
Coil and Loop (DISEMBL)
mvpdiafghstrVVFDVdcgvanfepvygdgkiRVEQWKELVKKEGYIamwrkpvnntcyashgagvqppicdsdddpenvcyvgARACITEVQNCQRMIMDLIIQHGLHAFMIHLTGLRV
Flexible Loop (DISEMBL)
mvpdiafghstrvvfdvDCGVANFepvygdgkirvEQWKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACITEVQNCQRMIMDLIIQHGLHAFMIHLTGLRV
Low Complexity Region (SEG)
MVPDIAFGHSTRVVFDVDCGVANFEPVYGDGKIRVEQWKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACITEVQNCQRMIMDLIIQHGLHAFMIHLTGLRV
Disordered region (IsUnstruct)
****IAFGHSTRVVFDVDCGVANFEPVYGDGKIRVEQWKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACITEVQNCQRMIMDLIIQHGLHAFMIHLTG***
Disordered Region (DISOPRED)
**PDIAFGHSTRVVFDVDCGVANFEPVYGDGKIRVEQWKELVKKEGYIAMWRKPVNNTCY**********ICDSDDDPENVCYVGARACITEVQNCQRMIMDLIIQHGLHAFMIHLTGLRV
Disordered Region (DISEMBL)
MVPDIAFGHSTRVVFDVDCGVANFEPVYGDGKIRVEQWKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACITEVQNCQRMIMDLIIQHGLHAFMIHLTGLRV
Disordered Region (DISPRO)
MVPDIAFGHSTRVVFDVDCGVANFEPVYGDGKIRVEQWKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACITEVQNCQRMIMDLIIQHGLHAFMIHLTGLR*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVPDIAFGHSTRVVFDVDCGVANFEPVYGDGKIRVEQWKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACITEVQNCQRMIMDLIIQHGLHAFMIHLTGLRV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	121	2.2.26 [Sep-21-2011]
Q9FG39	682	Probable methyltransferas	yes	no	0.578	0.102	0.567	1e-20
Q94KE1	655	Probable methyltransferas	no	no	0.586	0.108	0.487	6e-17
O22285	694	Probable methyltransferas	no	no	0.570	0.099	0.462	1e-15
Q93YV7	608	Probable methyltransferas	no	no	0.438	0.087	0.444	3e-08
Q940J9	623	Probable methyltransferas	no	no	0.438	0.085	0.444	3e-08
Q8VZV7	612	Probable methyltransferas	no	no	0.438	0.086	0.407	1e-07
Q8H118	611	Probable methyltransferas	no	no	0.454	0.090	0.4	2e-07
Q8L7V3	829	Probable methyltransferas	no	no	0.528	0.077	0.353	0.0001

>sp|Q9FG39|PMTC_ARATH Probable methyltransferase PMT12 OS=Arabidopsis thaliana GN=At5g06050 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 57/81 (70%), Gaps = 11/81 (13%)

Query: 25  EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           +PVY   K   EQW+E           LVKKEGYIA+W+KPVNNTCY S GAGV PP+C+
Sbjct: 377 QPVYKHEKALEEQWEEMLNLTTRLCWVLVKKEGYIAIWQKPVNNTCYLSRGAGVSPPLCN 436

Query: 74  SDDDPENVCYVGARACITEVQ 94
           S+DDP+NV YV  +ACIT ++
Sbjct: 437 SEDDPDNVWYVDLKACITRIE 457

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q94KE1|PMTA_ARATH Probable methyltransferase PMT10 OS=Arabidopsis thaliana GN=At1g77260 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 11/82 (13%)

Query: 25  EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           +PVY       EQWKE           L+KKEGYIA+WRKP+NN+CY S  AG +PP+C 
Sbjct: 369 QPVYKHEDNLQEQWKEMLDLTNRICWELIKKEGYIAVWRKPLNNSCYVSREAGTKPPLCR 428

Query: 74  SDDDPENVCYVGARACITEVQN 95
            DDDP++V YV  + CIT + +
Sbjct: 429 PDDDPDDVWYVDMKPCITRLPD 450

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O22285|PMTB_ARATH Probable methyltransferase PMT11 OS=Arabidopsis thaliana GN=At2g39750 PE=2 SV=1

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 11/80 (13%)

Query: 25  EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           +PVY       EQW E           LVKKEGY+A+W+KP NN CY S  AG +PP+CD
Sbjct: 405 QPVYKHEPALEEQWTEMLNLTISLCWKLVKKEGYVAIWQKPFNNDCYLSREAGTKPPLCD 464

Query: 74  SDDDPENVCYVGARACITEV 93
             DDP+NV Y   + CI+ +
Sbjct: 465 ESDDPDNVWYTNLKPCISRI 484

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q93YV7|PMT3_ARATH Probable methyltransferase PMT3 OS=Arabidopsis thaliana GN=At4g14360 PE=1 SV=1

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 38  WKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACIT 91
           WK +  K     +W+KP+ N CY     G QPP+C SD+DP+ V  V   ACIT
Sbjct: 335 WK-IAAKRNQTVIWQKPLTNDCYLEREPGTQPPLCRSDNDPDAVWGVNMEACIT 387

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q940J9|PMT8_ARATH Probable methyltransferase PMT8 OS=Arabidopsis thaliana GN=At1g04430 PE=1 SV=1

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 1/54 (1%)

Query: 38  WKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACIT 91
           W+  VK+   + +W+KP++N CY     G QPP+C SD DP+ V  V   ACIT
Sbjct: 343 WRIAVKRNQTV-VWQKPLSNDCYLEREPGTQPPLCRSDADPDAVAGVSMEACIT 395

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8VZV7|PMT9_ARATH Probable methyltransferase PMT9 OS=Arabidopsis thaliana GN=At5g14430 PE=1 SV=1

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 38  WKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACIT 91
           WK + K++  + +W KP++N+CY     GV PP+C S DDP+    V  +ACI+
Sbjct: 339 WKVVAKRDQSV-IWGKPISNSCYLKRDPGVLPPLCPSGDDPDATWNVSMKACIS 391

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8H118|PMT1_ARATH Probable methyltransferase PMT1 OS=Arabidopsis thaliana GN=At3g23300 PE=1 SV=2

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 41  LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACITEVQN 95
           +  K     +W+KP+ N CY     G QPP+C+SD DP+ V  V   ACIT+  +
Sbjct: 340 IAAKRNQTVIWQKPLTNDCYLGREPGTQPPLCNSDSDPDAVYGVNMEACITQYSD 394

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8L7V3|PMTQ_ARATH Probable methyltransferase PMT26 OS=Arabidopsis thaliana GN=At5g64030 PE=1 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 18/82 (21%)

Query: 26  PVYGDGKIRVEQWK---ELVKKEGY--------------IAMWRKPVNNTCYASHGAGVQ 68
           PVY      VE WK   EL+KK  +              +A +RKP +N CY +    V 
Sbjct: 526 PVYQKKTEDVEIWKAMSELIKKMCWELVSINKDTINGVGVATYRKPTSNECYKNRSEPV- 584

Query: 69  PPICDSDDDPENVCYVGARACI 90
           PPIC   DDP     V  +AC+
Sbjct: 585 PPICADSDDPNASWKVPLQACM 606

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
15239326	682	putative methyltransferase PMT12 [Arabid	0.578	0.102	0.567	5e-19
297806625	681	hypothetical protein ARALYDRAFT_487406 [	0.578	0.102	0.543	2e-17
224066783	620	predicted protein [Populus trichocarpa]	0.570	0.111	0.537	3e-17
326495324	701	predicted protein [Hordeum vulgare subsp	0.570	0.098	0.512	4e-17
255558544	655	ATP binding protein, putative [Ricinus c	0.570	0.105	0.537	8e-17
242059217	688	hypothetical protein SORBIDRAFT_03g03968	0.570	0.100	0.5	2e-16
225459683	666	PREDICTED: probable methyltransferase PM	0.553	0.100	0.538	3e-16
255566464	673	ATP binding protein, putative [Ricinus c	0.570	0.102	0.512	3e-16
356554668	659	PREDICTED: probable methyltransferase PM	0.586	0.107	0.5	4e-16
302141754	508	unnamed protein product [Vitis vinifera]	0.553	0.131	0.538	4e-16

>gi|15239326|ref|NP_196224.1| putative methyltransferase PMT12 [Arabidopsis thaliana] gi|75262411|sp|Q9FG39.1|PMTC_ARATH RecName: Full=Probable methyltransferase PMT12 gi|10257485|dbj|BAB10206.1| ankyrin-like protein [Arabidopsis thaliana] gi|51536506|gb|AAU05491.1| At5g06050 [Arabidopsis thaliana] gi|58652086|gb|AAW80868.1| At5g06050 [Arabidopsis thaliana] gi|110740549|dbj|BAE98380.1| ankyrin like protein [Arabidopsis thaliana] gi|332003576|gb|AED90959.1| putative methyltransferase PMT12 [Arabidopsis thaliana]

 Score = 98.6 bits (244), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 57/81 (70%), Gaps = 11/81 (13%)

Query: 25  EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           +PVY   K   EQW+E           LVKKEGYIA+W+KPVNNTCY S GAGV PP+C+
Sbjct: 377 QPVYKHEKALEEQWEEMLNLTTRLCWVLVKKEGYIAIWQKPVNNTCYLSRGAGVSPPLCN 436

Query: 74  SDDDPENVCYVGARACITEVQ 94
           S+DDP+NV YV  +ACIT ++
Sbjct: 437 SEDDPDNVWYVDLKACITRIE 457

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806625|ref|XP_002871196.1| hypothetical protein ARALYDRAFT_487406 [Arabidopsis lyrata subsp. lyrata] gi|297317033|gb|EFH47455.1| hypothetical protein ARALYDRAFT_487406 [Arabidopsis lyrata subsp. lyrata]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 56/81 (69%), Gaps = 11/81 (13%)

Query: 25  EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           +PVY   K   EQW+E           LVKKEGYIA+W+KPVNNT Y S GAG+ PP+C+
Sbjct: 376 QPVYKHEKALEEQWEEMLNLTTRLCWVLVKKEGYIAIWQKPVNNTRYLSRGAGLTPPLCN 435

Query: 74  SDDDPENVCYVGARACITEVQ 94
           S+DDP+NV YV  +ACIT ++
Sbjct: 436 SEDDPDNVWYVDLKACITRIE 456

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066783|ref|XP_002302213.1| predicted protein [Populus trichocarpa] gi|222843939|gb|EEE81486.1| predicted protein [Populus trichocarpa]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 11/80 (13%)

Query: 25  EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           +PVY   +   EQWKE           LVKKEGYIA+WRKP+NN+CY S   G QPP+CD
Sbjct: 272 QPVYKHEENLQEQWKEMQDLTRRICWELVKKEGYIAIWRKPLNNSCYLSRDGGAQPPLCD 331

Query: 74  SDDDPENVCYVGARACITEV 93
           S+DDP++V YV  R+CIT +
Sbjct: 332 SNDDPDSVWYVSLRSCITRL 351

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326495324|dbj|BAJ85758.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 56/80 (70%), Gaps = 11/80 (13%)

Query: 25  EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           +PVY   + + E WKE           LVKKEGY+AMWRKP+NN+CY S   GV+PP+CD
Sbjct: 413 QPVYKHEEAQQEAWKEMEDLTTRLCWELVKKEGYVAMWRKPLNNSCYMSREPGVKPPLCD 472

Query: 74  SDDDPENVCYVGARACITEV 93
           +DD+P++V YVG +ACI+ +
Sbjct: 473 TDDNPDDVWYVGLKACISRL 492

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558544|ref|XP_002520297.1| ATP binding protein, putative [Ricinus communis] gi|223540516|gb|EEF42083.1| ATP binding protein, putative [Ricinus communis]

 Score = 90.9 bits (224), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 11/80 (13%)

Query: 25  EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           +PVY       EQW+E           LVKKEGYIA+WRKP NN+CY +  AG QPP+CD
Sbjct: 366 QPVYKHEDNLQEQWREMQNLTNSICWELVKKEGYIAIWRKPFNNSCYLNREAGAQPPLCD 425

Query: 74  SDDDPENVCYVGARACITEV 93
           S+DDP++V YV  RACIT +
Sbjct: 426 SNDDPDDVWYVDLRACITRL 445

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242059217|ref|XP_002458754.1| hypothetical protein SORBIDRAFT_03g039680 [Sorghum bicolor] gi|241930729|gb|EES03874.1| hypothetical protein SORBIDRAFT_03g039680 [Sorghum bicolor]

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 11/80 (13%)

Query: 25  EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           +PVY   + + E WKE           LVKKEGYIAMWRKP+NN+CY + G  V+PP+CD
Sbjct: 400 QPVYKHEEAQQEAWKEMEDLTTRLCWELVKKEGYIAMWRKPLNNSCYMNRGPAVKPPLCD 459

Query: 74  SDDDPENVCYVGARACITEV 93
           +DD+P++V YV  +ACI+ +
Sbjct: 460 ADDNPDDVWYVSLKACISRL 479

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459683|ref|XP_002285887.1| PREDICTED: probable methyltransferase PMT10 [Vitis vinifera]

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 11/78 (14%)

Query: 25  EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           +PVY       EQWKE           LVKKEGYIA+WRKP+NN+CY +   GVQPP+CD
Sbjct: 380 QPVYKHEGNLQEQWKEMEDLTIRLCWELVKKEGYIAIWRKPLNNSCYLNRDTGVQPPLCD 439

Query: 74  SDDDPENVCYVGARACIT 91
            +DDP++V YVG + CIT
Sbjct: 440 PNDDPDDVWYVGMKPCIT 457

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566464|ref|XP_002524217.1| ATP binding protein, putative [Ricinus communis] gi|223536494|gb|EEF38141.1| ATP binding protein, putative [Ricinus communis]

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 11/80 (13%)

Query: 25  EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           +PVY    I  EQW+E           LVKKEGYIA+W+KP+NN+CY S   G +PP+CD
Sbjct: 384 QPVYKHEAILEEQWEEMLNLTTRLCWTLVKKEGYIAIWQKPINNSCYLSREEGTKPPLCD 443

Query: 74  SDDDPENVCYVGARACITEV 93
            DD+P+NV YV  +ACIT +
Sbjct: 444 PDDNPDNVWYVDLKACITRL 463

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554668|ref|XP_003545666.1| PREDICTED: probable methyltransferase PMT10-like [Glycine max]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 11/82 (13%)

Query: 25  EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           +PVY   +   EQWKE           LV+KEGYIA+WRKP++N+CY S      PP+C+
Sbjct: 372 QPVYKHEETLQEQWKEMENLTASICWELVRKEGYIAIWRKPMDNSCYLSRDIDAHPPLCE 431

Query: 74  SDDDPENVCYVGARACITEVQN 95
           S+DDP+NV YVG +ACIT + N
Sbjct: 432 SNDDPDNVWYVGLKACITPLPN 453

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302141754|emb|CBI18957.3| unnamed protein product [Vitis vinifera]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 11/78 (14%)

Query: 25  EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           +PVY       EQWKE           LVKKEGYIA+WRKP+NN+CY +   GVQPP+CD
Sbjct: 222 QPVYKHEGNLQEQWKEMEDLTIRLCWELVKKEGYIAIWRKPLNNSCYLNRDTGVQPPLCD 281

Query: 74  SDDDPENVCYVGARACIT 91
            +DDP++V YVG + CIT
Sbjct: 282 PNDDPDDVWYVGMKPCIT 299

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
TAIR|locus:2153704	682	AT5G06050 [Arabidopsis thalian	0.578	0.102	0.567	1e-26
TAIR|locus:2195955	655	AT1G77260 [Arabidopsis thalian	0.570	0.105	0.5	3.6e-22
TAIR|locus:2063947	694	AT2G39750 [Arabidopsis thalian	0.454	0.079	0.571	5.6e-20
TAIR|locus:2129660	608	AT4G14360 [Arabidopsis thalian	0.438	0.087	0.444	1.1e-11
TAIR|locus:2145658	612	AT5G14430 [Arabidopsis thalian	0.438	0.086	0.407	6.2e-11
TAIR|locus:2018329	623	AT1G04430 [Arabidopsis thalian	0.438	0.085	0.444	1e-10
TAIR|locus:2090935	611	AT3G23300 [Arabidopsis thalian	0.446	0.088	0.418	2.6e-10
TAIR|locus:2160806	829	AT5G64030 [Arabidopsis thalian	0.413	0.060	0.384	9.2e-09
TAIR|locus:2013628	770	AT1G29470 [Arabidopsis thalian	0.181	0.028	0.681	4.4e-07
TAIR|locus:2080823	895	AT3G51070 [Arabidopsis thalian	0.363	0.049	0.355	1.3e-06

TAIR|locus:2153704 AT5G06050 [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
 Identities = 46/81 (56%), Positives = 57/81 (70%)

Query:    25 EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
             +PVY   K   EQW+E           LVKKEGYIA+W+KPVNNTCY S GAGV PP+C+
Sbjct:   377 QPVYKHEKALEEQWEEMLNLTTRLCWVLVKKEGYIAIWQKPVNNTCYLSRGAGVSPPLCN 436

Query:    74 SDDDPENVCYVGARACITEVQ 94
             S+DDP+NV YV  +ACIT ++
Sbjct:   437 SEDDPDNVWYVDLKACITRIE 457

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA

TAIR|locus:2195955 AT1G77260 [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
 Identities = 40/80 (50%), Positives = 51/80 (63%)

Query:    25 EPVYGDGKIRVEQWKE-----------LVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
             +PVY       EQWKE           L+KKEGYIA+WRKP+NN+CY S  AG +PP+C 
Sbjct:   369 QPVYKHEDNLQEQWKEMLDLTNRICWELIKKEGYIAVWRKPLNNSCYVSREAGTKPPLCR 428

Query:    74 SDDDPENVCYVGARACITEV 93
              DDDP++V YV  + CIT +
Sbjct:   429 PDDDPDDVWYVDMKPCITRL 448

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA

TAIR|locus:2063947 AT2G39750 [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
 Identities = 32/56 (57%), Positives = 41/56 (73%)

Query:    38 WKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACITEV 93
             WK LVKKEGY+A+W+KP NN CY S  AG +PP+CD  DDP+NV Y   + CI+ +
Sbjct:   430 WK-LVKKEGYVAIWQKPFNNDCYLSREAGTKPPLCDESDDPDNVWYTNLKPCISRI 484

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2129660 AT4G14360 [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
 Identities = 24/54 (44%), Positives = 31/54 (57%)

Query:    38 WKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACIT 91
             WK +  K     +W+KP+ N CY     G QPP+C SD+DP+ V  V   ACIT
Sbjct:   335 WK-IAAKRNQTVIWQKPLTNDCYLEREPGTQPPLCRSDNDPDAVWGVNMEACIT 387

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2145658 AT5G14430 [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
 Identities = 22/54 (40%), Positives = 34/54 (62%)

Query:    38 WKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACIT 91
             WK + K++  + +W KP++N+CY     GV PP+C S DDP+    V  +ACI+
Sbjct:   339 WKVVAKRDQSV-IWGKPISNSCYLKRDPGVLPPLCPSGDDPDATWNVSMKACIS 391

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2018329 AT1G04430 [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
 Identities = 24/54 (44%), Positives = 33/54 (61%)

Query:    38 WKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACIT 91
             W+  VK+   + +W+KP++N CY     G QPP+C SD DP+ V  V   ACIT
Sbjct:   343 WRIAVKRNQTV-VWQKPLSNDCYLEREPGTQPPLCRSDADPDAVAGVSMEACIT 395

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2090935 AT3G23300 [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
 Identities = 23/55 (41%), Positives = 31/55 (56%)

Query:    38 WKELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACITE 92
             W  +  K     +W+KP+ N CY     G QPP+C+SD DP+ V  V   ACIT+
Sbjct:   338 WT-IAAKRNQTVIWQKPLTNDCYLGREPGTQPPLCNSDSDPDAVYGVNMEACITQ 391

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2160806 AT5G64030 [Arabidopsis thaliana (taxid:3702)]

 Score = 93 (37.8 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
 Identities = 20/52 (38%), Positives = 28/52 (53%)

Query:    39 KELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACI 90
             K+ +   G +A +RKP +N CY +    V PPIC   DDP     V  +AC+
Sbjct:   557 KDTINGVG-VATYRKPTSNECYKNRSEPV-PPICADSDDPNASWKVPLQACM 606

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2013628 AT1G29470 [Arabidopsis thaliana (taxid:3702)]

 Score = 84 (34.6 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
 Identities = 15/22 (68%), Positives = 19/22 (86%)

Query:     3 PDIAFGHSTRVVFDVDCGVANF 24
             PDIA+G+ TRV+ DV CGVA+F
Sbjct:   357 PDIAWGNRTRVILDVGCGVASF 378

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2080823 AT3G51070 [Arabidopsis thaliana (taxid:3702)]

 Score = 87 (35.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
 Identities = 16/45 (35%), Positives = 26/45 (57%)

Query:    49 AMWRKPVNNTCYASHGAGVQPPICDSDDDPENVCYVGARACITEV 93
             A+++KP  N CY       +PP+C ++DD     YV  +AC+ +V
Sbjct:   639 AIYQKPATNECYEKRKHN-KPPLCKNNDDANAAWYVPLQACMHKV 682

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G06050	dehydration-responsive protein-related; dehydration-responsive protein-related; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF248, methyltransferase putative (InterPro-IPR004159); BEST Arabidopsis thaliana protein match is- dehydration-responsive family protein (TAIR-AT2G39750.1); Has 497 Blast hits to 489 proteins in 40 species- Archae - 0; Bacteria - 24; Metazoa - 2; Fungi - 0; Plants - 468; Viruses - 0; Other Eukaryotes - 3 (so [...] (682 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	MCM3	DNA replication licensing factor, putative; DNA replication licensing factor, putative; FUNCTIO [...] (776 aa)				•					0.573
	MAP65-2	MAP65-2; MAP65-2; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- anaphase; LOCATED IN- [...] (578 aa)				•					0.454
	BSK2	BSK2 (BR-SIGNALING KINASE 2); ATP binding / binding / kinase/ protein kinase/ protein tyrosine [...] (489 aa)				•					0.433
	AT2G04280	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (568 aa)				•					0.427
	AT1G60770	pentatricopeptide (PPR) repeat-containing protein; pentatricopeptide (PPR) repeat-containing pr [...] (491 aa)				•					0.419
	AT3G53190	pectate lyase family protein; pectate lyase family protein; FUNCTIONS IN- lyase activity, pecta [...] (483 aa)				•					0.409
	AT1G65010	unknown protein; unknown protein; LOCATED IN- chloroplast; EXPRESSED IN- 22 plant structures; E [...] (1345 aa)				•					0.401

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	121
pfam03141	506	pfam03141, Methyltransf_29, Putative S-adenosyl-L-	4e-17
pfam03141	506	pfam03141, Methyltransf_29, Putative S-adenosyl-L-	8e-05

>gnl|CDD|217386 pfam03141, Methyltransf_29, Putative S-adenosyl-L-methionine-dependent methyltransferase

 Score = 75.4 bits (186), Expect = 4e-17
 Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 12/81 (14%)

Query: 26  PVY-GDGKIRVEQWK-----------ELVKKEGYIAMWRKPVNNTCYASHGAGVQPPICD 73
           PVY  D +   E+WK           +LV K+G IA+W+KPVNN+CY     G +PP+C 
Sbjct: 221 PVYARDEEDLQEEWKAMEALAKSLCWKLVAKKGDIAIWQKPVNNSCYNKREPGKKPPLCK 280

Query: 74  SDDDPENVCYVGARACITEVQ 94
             DDP+   YV   ACIT + 
Sbjct: 281 DSDDPDAAWYVPMEACITPLP 301

This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase. Length = 506

>gnl|CDD|217386 pfam03141, Methyltransf_29, Putative S-adenosyl-L-methionine-dependent methyltransferase

 Score = 40.0 bits (94), Expect = 8e-05
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 1   MVPDIAFGHSTRVVFDVDCGVANF 24
           M+PDIA+G   R   DV CGVA+F
Sbjct: 108 MIPDIAWGGRVRTALDVGCGVASF 131

This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase. Length = 506

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	121
PF03141	506	Methyltransf_29: Putative S-adenosyl-L-methionine-	99.93

>PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases

Probab=99.93  E-value=3.5e-27  Score=205.95  Aligned_cols=95  Identities=35%  Similarity=0.689  Sum_probs=82.6

Q ss_pred             ccccccceeEEEecCce----------------eeecCCCCCCC-cccHHHHHH-----------HhhhcCceEEEEcCC
Q 036042            4 DIAFGHSTRVVFDVDCG----------------VANFEPVYGDG-KIRVEQWKE-----------LVKKEGYIAMWRKPV   55 (121)
Q Consensus         4 ~~~~~~~~~~~~~~~~~----------------VlSgPPVy~k~-~ed~~eW~~-----------kvaekg~~AIWqKP~   55 (121)
                      |++---||++.|..++|                ||||||||+++ +++.+||++           +|++++++||||||+
T Consensus       183 DmvHcsrc~i~W~~~~g~~l~evdRvLRpGGyfv~S~ppv~~r~~~~~~~~~~~~~~l~~~lCW~~va~~~~~aIwqKp~  262 (506)
T PF03141_consen  183 DMVHCSRCLIPWHPNDGFLLFEVDRVLRPGGYFVLSGPPVYQRTDEDLEEEWNAMEDLAKSLCWKKVAEKGDTAIWQKPT  262 (506)
T ss_pred             hhhhcccccccchhcccceeehhhhhhccCceEEecCCcccccchHHHHHHHHHHHHHHHHHHHHHheeeCCEEEEeccC
Confidence            44445688888888765                49999999554 455679999           999999999999999


Q ss_pred             CChhhhccCCCCCCCCCCCCCCCCCcccccccccccccccCCc
Q 036042           56 NNTCYASHGAGVQPPICDSDDDPENVCYVGARACITEVQNCQR   98 (121)
Q Consensus        56 nnsCy~kR~~~~~PplC~~~ddpD~aWY~pMeaCITplP~~~~   98 (121)
                      ||+||.+|+..+.||+|++++|||++||+||++||||+|++.+
T Consensus       263 ~~~Cy~~r~~~~~pplC~~~~dpd~aWY~~l~~Cit~~p~~~~  305 (506)
T PF03141_consen  263 NNSCYQKRKPGKSPPLCDSSDDPDAAWYVPLEACITPLPEVSS  305 (506)
T ss_pred             CchhhhhccCCCCCCCCCCCCCCcchhhcchhhhcCcCCcccc
Confidence            9999999988789999999999999999999999999998744

; GO: 0008168 methyltransferase activity

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00