Citrus Sinensis ID: 036062

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330---
Protein Sequence
KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSADLAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHHccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccEEEEHEEEcccccc
Coil and Loop (DISEMBL)
KYHPTRALTLVYQPFALGTMAILAYNeskidtrkrNITGYIIFFASTLALLLLDLatsgegglgpfLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYafffpklpivKYFRskaasegsktVSADLAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLsifpgflyentgqhrlgeWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPafyftakygdqgWMIFLTSFLGLTNGYLTVCVMTVAPKGYK
Flexible Loop (DISEMBL)
kyhptraltlvyqpfalGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSADLAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK
Low Complexity Region (SEG)
KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFastlalllldlatsGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQsffaglaasgaltsglrlltKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSADLaaagiqtkaaqaEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK
Disordered region (IsUnstruct)
*****RALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRS***********************************LSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVMTVA*****
Disordered Region (DISOPRED)
*YHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRS************************************SNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKG**
Disordered Region (DISEMBL)
KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFR***********SADLAAAGI************QYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK
Disordered Region (DISPRO)
KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAAS*****************************ERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (HMMTOP)
ooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSADLAxxxxxxxxxxxxxxxxxxxxxxxxQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	333	2.2.26 [Sep-21-2011]
Q9M0Y3	418	Equilibrative nucleotide	yes	no	0.993	0.791	0.701	1e-139
Q9M0Y1	419	Equilibrative nucleotide	no	no	0.996	0.792	0.677	1e-136
Q944N8	418	Equilibrative nucleotide	no	no	0.993	0.791	0.659	1e-131
Q9M0Y2	418	Equilibrative nucleotide	no	no	0.993	0.791	0.656	1e-128
Q9SR64	417	Equilibrative nucleotide	no	no	0.984	0.786	0.598	1e-115
Q944P0	417	Equilibrative nucleotide	no	no	0.996	0.796	0.591	1e-113
Q8VXY7	450	Equilibrative nucleotide	no	no	0.726	0.537	0.330	3e-29
Q84XI3	389	Equilibrative nucleotide	no	no	0.888	0.760	0.268	2e-23
A1L272	518	Equilibrative nucleoside	no	no	0.666	0.428	0.210	8e-05
Q14542	456	Equilibrative nucleoside	yes	no	0.777	0.567	0.206	0.0001

>sp|Q9M0Y3|ENT3_ARATH Equilibrative nucleotide transporter 3 OS=Arabidopsis thaliana GN=ENT3 PE=1 SV=1

 Score =  495 bits (1275), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 233/332 (70%), Positives = 281/332 (84%), Gaps = 1/332 (0%)

Query: 2   YHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEG 61
           YHP+R LTLVYQPFALGT+ ILAY+ESKI+TRKRN+ GYI+F  ST  L++LDLAT G G
Sbjct: 51  YHPSRVLTLVYQPFALGTILILAYHESKINTRKRNLIGYILFTISTFLLIVLDLATKGRG 110

Query: 62  GLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTK 121
           G+GP++G+C  VA FG+ADA V+GG++GDLS M PE +QSF  GLA SGALTS LRL+TK
Sbjct: 111 GIGPYIGLCAVVASFGLADATVQGGMIGDLSLMCPELVQSFMGGLAVSGALTSALRLITK 170

Query: 122 AAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSAD 181
           AAFEK++DG RKG M+FLAI T  E +C+ LYA+ FPKLPIVKY+R KAASEGSKTVSAD
Sbjct: 171 AAFEKTNDGPRKGAMMFLAISTCIELLCVFLYAYVFPKLPIVKYYRRKAASEGSKTVSAD 230

Query: 182 LAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQ 241
           LAAAGIQ ++   +D++K  +RLSNK+L IQN DYA++LFLIYV TLSIFPGFLYENTGQ
Sbjct: 231 LAAAGIQNQSDLTDDDSKN-QRLSNKELLIQNIDYAVNLFLIYVCTLSIFPGFLYENTGQ 289

Query: 242 HRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYG 301
           H LG+WY+LVL+A YN WDL+ RY PLVK +K+E+RK + I +L R+LL+PAFYFTAKYG
Sbjct: 290 HGLGDWYALVLVAMYNCWDLVGRYTPLVKWLKIENRKLITIAVLSRYLLIPAFYFTAKYG 349

Query: 302 DQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
           DQGWMI L S LGLTNG+LTVC+MT+APKGYK
Sbjct: 350 DQGWMIMLISVLGLTNGHLTVCIMTIAPKGYK 381

Nucleoside transporter that functions as a pyrimidine nucleoside carrier in all organs. Has high affinity for adenosine and uridine when expressed in a heterologous system (yeast). Mediates proton-dependent adenosine or uridine transport in Xenopus oocytes.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9M0Y1|ENT5_ARATH Equilibrative nucleotide transporter 5 OS=Arabidopsis thaliana GN=ENT5 PE=2 SV=1

 Score =  486 bits (1250), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 225/332 (67%), Positives = 272/332 (81%)

Query: 1   KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGE 60
            YHP+R LT VYQPF++GT+ I AYNESKI+TRKRN+ GYI+F  S   L++LDLAT G 
Sbjct: 50  DYHPSRVLTFVYQPFSIGTIVIFAYNESKINTRKRNLIGYIVFTTSIFLLIILDLATKGH 109

Query: 61  GGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLT 120
           GG+GP++ +C  V  FG ADA VRGG++GDLS M PE +QSF AGLA +GALTS  RL+T
Sbjct: 110 GGIGPYIVLCAIVGSFGFADASVRGGMIGDLSLMCPELIQSFVAGLAVAGALTSAFRLIT 169

Query: 121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
           KAAFEK+HDGLRKG M+FLAI T  EF+C+LLYA+ FPKLPIVKY+RSKAASEGSKTV A
Sbjct: 170 KAAFEKTHDGLRKGAMIFLAISTLVEFLCVLLYAYVFPKLPIVKYYRSKAASEGSKTVYA 229

Query: 181 DLAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTG 240
           DLAAAGIQ ++    D+  + +RL+NK+L ++N DY ++LFLIYVLTLSI PGFLYENTG
Sbjct: 230 DLAAAGIQNQSVLTADDVSKDKRLNNKELLLENVDYVVNLFLIYVLTLSILPGFLYENTG 289

Query: 241 QHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKY 300
           QH LG WY+LVLIA YN WDL+ RYIP+VK + +E+RKGL + +L RFLLVPAFYFTAKY
Sbjct: 290 QHGLGSWYALVLIAMYNWWDLVGRYIPMVKWLNVENRKGLTVAVLTRFLLVPAFYFTAKY 349

Query: 301 GDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGY 332
           GDQGWMI L S LGLTNG+LTVC++  AP+GY
Sbjct: 350 GDQGWMILLVSILGLTNGHLTVCILAKAPRGY 381

May be involved in nucleoside transport.

Arabidopsis thaliana (taxid: 3702)

>sp|Q944N8|ENT6_ARATH Equilibrative nucleotide transporter 6 OS=Arabidopsis thaliana GN=ENT6 PE=1 SV=1

 Score =  468 bits (1204), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 219/332 (65%), Positives = 270/332 (81%), Gaps = 1/332 (0%)

Query: 2   YHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEG 61
           YHP+R LTLVYQPFA G + ILAY+ESK  TRKRN+ GYI++  ST  L++LDLAT G G
Sbjct: 51  YHPSRVLTLVYQPFAFGAIVILAYHESKTSTRKRNLIGYILYTISTFLLIVLDLATKGRG 110

Query: 62  GLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTK 121
           G GP+ G+C  VA FG+ADA V+GG+ GDLS M PE +QS+  G+A +GALTS LRL+TK
Sbjct: 111 GFGPYTGLCAVVAAFGLADATVQGGMFGDLSLMCPELVQSYMGGMAVAGALTSALRLITK 170

Query: 122 AAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSAD 181
           AAFEKS++GLRKG M+FLAI T  E + ++LYA+  PKLPIV Y+R KAAS+GSKTVSAD
Sbjct: 171 AAFEKSNNGLRKGAMMFLAISTCIELLSVMLYAYVLPKLPIVMYYRRKAASQGSKTVSAD 230

Query: 182 LAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQ 241
           LAAAGIQ ++  ++D++K  +RLS K+L  QN D+A++LFLIYV TLSIFPGFLYENTGQ
Sbjct: 231 LAAAGIQNQSDLSDDDSKN-QRLSKKELLFQNIDHAVNLFLIYVCTLSIFPGFLYENTGQ 289

Query: 242 HRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYG 301
           H LG WY+LVL+A YN WDL+ RY PLVK + +E+RK + I +L R+LL+PAFYFTAKYG
Sbjct: 290 HGLGAWYALVLVAMYNCWDLVGRYTPLVKWLNIENRKLITIAVLSRYLLIPAFYFTAKYG 349

Query: 302 DQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
           DQGWMI L S LGLTNG+LTVC+MT+APKGYK
Sbjct: 350 DQGWMIMLVSVLGLTNGHLTVCIMTIAPKGYK 381

Nucleoside tranpsorter that can mediate uptake of adenosine, uridine, guanosine or cytidine when expressed in a heterologous system (yeast).

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M0Y2|ENT4_ARATH Equilibrative nucleotide transporter 4 OS=Arabidopsis thaliana GN=ENT4 PE=1 SV=1

 Score =  459 bits (1180), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 218/332 (65%), Positives = 268/332 (80%), Gaps = 1/332 (0%)

Query: 2   YHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEG 61
           YHP+R  TL+YQP ALGT+ ILAY ESKI TRKR +TGYI+F  ST  L++LDL T G G
Sbjct: 51  YHPSRVFTLIYQPIALGTIMILAYRESKISTRKRILTGYILFTISTFLLIVLDLTTKGHG 110

Query: 62  GLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTK 121
           G+G ++ +C  VA FG+ADA V+GG+VGDLS M PE +QS+ AG   +GALTS LRL+TK
Sbjct: 111 GIGHYIVLCTIVASFGLADATVKGGLVGDLSLMCPELIQSYMAGSGMAGALTSVLRLITK 170

Query: 122 AAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSAD 181
           AAFEKS++ LRKG M+FLAI T  E +C++LYA+ FPKLPIVKY+R KAASEGSKTV AD
Sbjct: 171 AAFEKSNNSLRKGAMIFLAISTFIELLCVILYAYVFPKLPIVKYYRRKAASEGSKTVVAD 230

Query: 182 LAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQ 241
           LAAAGIQ  +  ++D++K  + L  K+L +QN D+A++LFLIYVLTLSIFPGFLYENTGQ
Sbjct: 231 LAAAGIQNLSDLSDDDSKN-QMLRKKELLLQNIDHAVNLFLIYVLTLSIFPGFLYENTGQ 289

Query: 242 HRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYG 301
           H LG+WY+L+L+A+YN WDL  RY PLVK +KLE+RK L I +L R+ LVPAFYFTAKYG
Sbjct: 290 HGLGDWYALILVATYNFWDLFGRYAPLVKWLKLENRKALTIAVLTRYFLVPAFYFTAKYG 349

Query: 302 DQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
           D+GWMI L S LGLT G+LTVC+MT+AP GYK
Sbjct: 350 DKGWMIMLVSILGLTTGHLTVCIMTIAPNGYK 381

Nucleoside tranpsorter that can mediate uptake of adenosine, uridine, guanosine or cytidine when expressed in a heterologous system (yeast).

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SR64|ENT2_ARATH Equilibrative nucleotide transporter 2 OS=Arabidopsis thaliana GN=ENT2 PE=2 SV=1

 Score =  414 bits (1065), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/329 (59%), Positives = 261/329 (79%), Gaps = 1/329 (0%)

Query: 2   YHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEG 61
           YHP+R LT++YQ F++G +++L + E++++TR+RN+ GY +F   +LA+L+L+LATSG G
Sbjct: 50  YHPSRILTIIYQSFSIGALSVLVHKEARLNTRRRNLFGYSLFSLGSLAVLVLNLATSGRG 109

Query: 62  GLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTK 121
           G+G F+GVCV  A FG+ADAHV GG++GDLS M PEF+QSF AGLAASGALTSGLRL+ K
Sbjct: 110 GIGSFIGVCVISAAFGLADAHVYGGMIGDLSMMTPEFLQSFLAGLAASGALTSGLRLVIK 169

Query: 122 AAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSAD 181
           AAF+ S DGLRKG  LF A+  SFE VC+LLYA+ FP++P+VKY+R+KA  +GS+TV AD
Sbjct: 170 AAFKNSRDGLRKGATLFFAMSASFELVCVLLYAYVFPRIPVVKYYRAKAIIQGSRTVWAD 229

Query: 182 LAAAGIQTKAAQAEDEAKQYE-RLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTG 240
           LAA GIQ +    ++EA +Y+ RL+   L +   D A+ LFL+Y+LT SIFPGFL E+TG
Sbjct: 230 LAAGGIQVQPITQDEEALRYDHRLNKGDLMLLYSDLAVTLFLVYLLTFSIFPGFLSEDTG 289

Query: 241 QHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKY 300
           ++ LG+WY+LVLIA +NV DL+ RY+P+VK +K++SRK L+IT L R LL+PAF  T  Y
Sbjct: 290 KYSLGDWYALVLIAVFNVSDLVGRYVPMVKKLKMKSRKCLLITSLGRLLLIPAFNITGIY 349

Query: 301 GDQGWMIFLTSFLGLTNGYLTVCVMTVAP 329
           G QGWMIFL S LGL+NGYLTVCV+T AP
Sbjct: 350 GSQGWMIFLMSVLGLSNGYLTVCVITSAP 378

May be involved in nucleoside transport.

Arabidopsis thaliana (taxid: 3702)

>sp|Q944P0|ENT7_ARATH Equilibrative nucleotide transporter 7 OS=Arabidopsis thaliana GN=ENT7 PE=1 SV=1

 Score =  407 bits (1047), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/335 (59%), Positives = 256/335 (76%), Gaps = 3/335 (0%)

Query: 1   KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGE 60
           KYHP+R LT+VYQ  A   +  LA  E+K++TR RNI GY ++ A T  L++LDLA+ G 
Sbjct: 48  KYHPSRVLTIVYQLVANVFIITLATKEAKLNTRLRNIFGYSLYTAGTFCLIILDLASHGS 107

Query: 61  GGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLT 120
           G +  ++ +C+ VALFG+ADA V+G +VGDLSFM P+F+Q+F AGL  +GALTS LRL+T
Sbjct: 108 GSVVAYVLLCLIVALFGLADAFVQGAMVGDLSFMSPDFIQAFMAGLGIAGALTSVLRLIT 167

Query: 121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
           KA F+ S DGLRKG +LF+ I T  E  C+ LY   F KLPIVKY+R+KA  EG+KTVSA
Sbjct: 168 KAIFDNSPDGLRKGALLFIGIATLIELACVFLYTLVFAKLPIVKYYRAKAGKEGAKTVSA 227

Query: 181 DLAAAGIQTKAAQAE--DEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYEN 238
           DLAAAG+Q +A Q    DE+K  ++L+ KQL  +N D  ++L LIYV+TLSIFPGFLYEN
Sbjct: 228 DLAAAGLQEQAEQVHQMDESK-IQKLTKKQLLRENIDLGINLSLIYVVTLSIFPGFLYEN 286

Query: 239 TGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTA 298
           TG+HRLG+WY+ VL+A YN WD I+R+IP +K + +ESRK + + ++ R LLVPAFYFTA
Sbjct: 287 TGEHRLGDWYAPVLVAMYNGWDAISRFIPSIKPLAMESRKWITVCVVARLLLVPAFYFTA 346

Query: 299 KYGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
           KY DQGWM+FLTSFLGL+NGYLTVC+ + APKGY 
Sbjct: 347 KYADQGWMLFLTSFLGLSNGYLTVCIFSTAPKGYN 381

Nucleoside tranpsorter that can mediate uptake of adenosine, uridine, guanosine or cytidine when expressed in a heterologous system (yeast).

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VXY7|ENT1_ARATH Equilibrative nucleotide transporter 1 OS=Arabidopsis thaliana GN=ENT1 PE=1 SV=1

 Score =  129 bits (324), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 134/263 (50%), Gaps = 21/263 (7%)

Query: 73  VALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLR 132
           VAL G+ DA ++GG++G    M   +MQ+  AG A SG L S LR+LTKA + +  DGLR
Sbjct: 170 VALSGLGDALMQGGLIGVAGEMPERYMQAVVAGTAGSGVLVSLLRILTKAVYPQDPDGLR 229

Query: 133 KGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSADLAAAGIQTKAA 192
           K   L+ A+      +C + Y     KLP++K+   +   E             I+ K+ 
Sbjct: 230 KSANLYFAVGIVVMVICAVFYNVAH-KLPVIKFHEERKNEE------------LIREKSE 276

Query: 193 QAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQHRLGEWYSLVL 252
           +         R +   +  +   +   + L+Y++TLSIFPG++ E+     L +WY ++L
Sbjct: 277 EKGSLTGLAWRTTLWDIVTKVKSHGFGIVLLYMVTLSIFPGYITEDVHSELLTDWYPILL 336

Query: 253 IASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGD-----QGWMI 307
           IA+YNV+DL+ +   L     LE  K  +   + R L  P F+    +G      +  + 
Sbjct: 337 IAAYNVFDLVGKC--LTAVFMLEDEKIAVGGSIARLLFYPLFW-GCLHGPMFLRTEIPVT 393

Query: 308 FLTSFLGLTNGYLTVCVMTVAPK 330
            LT  LGLTNGYLT  +M +APK
Sbjct: 394 ILTCLLGLTNGYLTSVLMILAPK 416

Nucleoside transporter involved in adenosine transport and required for nucleotide metabolism which influences growth and pollen germination. Has high affinity for adenosine when expressed in a heterologous system (yeast).

Arabidopsis thaliana (taxid: 3702)

>sp|Q84XI3|ENT8_ARATH Equilibrative nucleotide transporter 8 OS=Arabidopsis thaliana GN=ETN8 PE=2 SV=1

 Score =  110 bits (274), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 150/335 (44%), Gaps = 39/335 (11%)

Query: 3   HPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGG 62
           H  +  T+ Y   ++  + ++    +++  R R   G+ +F  + +   L+D    GE G
Sbjct: 53  HVEKTFTVAYMSCSVLVLVLMMTWNTRMSYRVRMNLGFSMFIIAMMISPLIDWVWKGEKG 112

Query: 63  LG-PFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTK 121
               ++ +   V L G+AD  V G ++G    +  ++MQ+ FAG A+SG + S LR+ TK
Sbjct: 113 ENVSYMLMVGSVVLCGLADGVVGGSLIGSAGKLPRQYMQAIFAGTASSGIIISLLRIATK 172

Query: 122 AAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSAD 181
           A+  ++  G+R     +  I +S   +C  +      KLP+++    K       T++  
Sbjct: 173 ASLPQTPQGMRTSAHSYF-IVSSTILLCCFISCNVLHKLPVMQQ-HLKFHQPLHSTLTIW 230

Query: 182 LAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQ 241
           +    I+  A+                           + +IY +TLSIFPGF+ EN   
Sbjct: 231 MVGRKIKWPAS--------------------------GMLIIYSVTLSIFPGFIAENLKS 264

Query: 242 HRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYG 301
             L  WY ++LI  YN+ D + +   L      +S K      + R L  P   F+A   
Sbjct: 265 QLLQSWYPILLITVYNISDFVGK--SLTALYLWQSIKSATWACIVRLLFYP--LFSACLR 320

Query: 302 DQGWM------IFLTSFLGLTNGYLTVCVMTVAPK 330
              W+      + LT  LGLTNGYLT  +M +APK
Sbjct: 321 GPKWLRTEVPVVVLTFMLGLTNGYLTSVLMIMAPK 355

May be involved in nucleoside transport.

Arabidopsis thaliana (taxid: 3702)

>sp|A1L272|S29A4_DANRE Equilibrative nucleoside transporter 4 OS=Danio rerio GN=slc29a4 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/276 (21%), Positives = 100/276 (36%), Gaps = 54/276 (19%)

Query: 89  GDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFV 148
           G +  +   + Q    G + +G + S  R+ TK   +      RK  ++F  I      V
Sbjct: 187 GYMGMLPKRYTQGVMTGESTAGVIISLSRIFTKLLIKDE----RKNTIIFFVISICMVLV 242

Query: 149 CILLYAFFFPKLPIVKYFRSKA------------------------ASEGSKTVSADLAA 184
           C +L+     +   V+Y+ S A                          EG+  V    A 
Sbjct: 243 CFILH-LLVRRTRFVQYYTSLARRGLSHAKDHSQHASQYQVHHDVITEEGNGAVGCSPAG 301

Query: 185 AGIQTKAAQAE----DEAKQYERLS---NKQLFIQNF-------DYALDLFLIYVLTLSI 230
            G    A        D  K   + S    K + +  +        Y L + + Y +TL +
Sbjct: 302 DGCADFAGGNTYVRFDVPKPKMKRSWPGVKDMILHRYVVARVIWTYMLSIAVTYFITLCL 361

Query: 231 FPGFLYENTGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILC-RFL 289
           FPG L        LGEW  ++++A +N+ D + +   ++  V  E     ++   C R +
Sbjct: 362 FPG-LESEIKNATLGEWLPILIMAIFNISDFVGK---ILAAVPYEWNGTRLLFFSCVRVV 417

Query: 290 LVPAFYFTA------KYGDQGWMIFLTSFLGLTNGY 319
            +P F           +    W    + F+G+TNGY
Sbjct: 418 FIPLFIMCVYPAQMPMFSHPAWPCIFSLFMGITNGY 453

Functions as a polyspecific organic cation transporter, efficiently transporting many organic cations such as monoamine neurotransmitters 1-methyl-4-phenylpyridinium and biogenic amines including serotonin, dopamine, norepinephrine and epinephrine. May play a role in regulating central nervous system homeostasis of monoamine neurotransmitters. May be involved in luminal transport of organic cations in the kidney and seems to use luminal proton gradient to drive organic cation reabsorption. Does not seem to transport nucleoside and nucleoside analogs such as uridine, cytidine, thymidine, adenosine, inosine, guanosine, and azidothymidine.

Danio rerio (taxid: 7955)

>sp|Q14542|S29A2_HUMAN Equilibrative nucleoside transporter 2 OS=Homo sapiens GN=SLC29A2 PE=1 SV=3

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/305 (20%), Positives = 113/305 (37%), Gaps = 46/305 (15%)

Query: 64  GPFLGVCV-FVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKA 122
           GPF  + +  V       A ++G + G L  M   +   F +G   +G   +   LL+ A
Sbjct: 124 GPFFSITMASVCFINSFSAVLQGSLFGQLGTMPSTYSTLFLSGQGLAGIFAALAMLLSMA 183

Query: 123 AFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSADL 182
           +     D     +  F+  C     V IL+    +  LP +K+ R   A++ S+  + +L
Sbjct: 184 S---GVDAETSALGYFITPC-----VGILMSIVCYLSLPHLKFARYYLANKSSQAQAQEL 235

Query: 183 AAAG------------------------IQTKAAQAEDEAKQYERLSNKQLFIQNFDYAL 218
                                       ++ +     DE ++  + S   +F + +  AL
Sbjct: 236 ETKAELLQSDENGIPSSPQKVALTLDLDLEKEPESEPDEPQKPGKPSVFTVFQKIWLTAL 295

Query: 219 DLFLIYVLTLSIFPGFLYENTGQHRLGEWYS----LVLIASYNVWDLIARYIPLVKCVKL 274
            L L++ +TLS+FP      T     G+W      +     +N+ D + R +        
Sbjct: 296 CLVLVFTVTLSVFPAITAMVTSSTSPGKWSQFFNPICCFLLFNIMDWLGRSLTSYFLWPD 355

Query: 275 ESRKGLMITILCRFLLVPAFYFTAK---------YGDQGWMIFLTSFLGLTNGYLTVCVM 325
           E  + L + +  RFL VP F              +    + I       ++NGYL    M
Sbjct: 356 EDSRLLPLLVCLRFLFVPLFMLCHVPQRSRLPILFPQDAYFITFMLLFAVSNGYLVSLTM 415

Query: 326 TVAPK 330
            +AP+
Sbjct: 416 CLAPR 420

Mediates equilibrative transport of purine, pyrimidine nucleosides and the purine base hypoxanthine. Very less sensitive than SLC29A1 to inhibition by nitrobenzylthioinosine (NBMPR), dipyridamole, dilazep and draflazine.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	333
224076725	423	equilibrative nucleoside transporter [Po	1.0	0.787	0.802	1e-154
255567449	419	nucleoside transporter, putative [Ricinu	0.990	0.787	0.759	1e-149
224076733	426	equilibrative nucleoside transporter [Po	1.0	0.781	0.758	1e-148
359495706	417	PREDICTED: equilibrative nucleoside tran	0.996	0.796	0.753	1e-147
297745658	920	unnamed protein product [Vitis vinifera]	0.996	0.360	0.753	1e-147
225447689	417	PREDICTED: equilibrative nucleoside tran	0.993	0.793	0.762	1e-145
147766692	401	hypothetical protein VITISV_013398 [Viti	0.987	0.820	0.761	1e-144
334683129	418	equilibrative nucleoside transporter 3 [	1.0	0.796	0.719	1e-143
224145557	404	equilibrative nucleoside transporter [Po	1.0	0.824	0.751	1e-142
224116252	423	equilibrative nucleoside transporter [Po	0.996	0.784	0.784	1e-142

>gi|224076725|ref|XP_002304987.1| equilibrative nucleoside transporter [Populus trichocarpa] gi|222847951|gb|EEE85498.1| equilibrative nucleoside transporter [Populus trichocarpa]

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 268/334 (80%), Positives = 299/334 (89%), Gaps = 1/334 (0%)

Query: 1   KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGE 60
           KYHP+R LTLVYQPFA+GTMAILAYNE+KI+TRKRNI GYI+F ASTL L+++DLATSG 
Sbjct: 53  KYHPSRVLTLVYQPFAIGTMAILAYNEAKINTRKRNIAGYILFTASTLMLMVVDLATSGR 112

Query: 61  GGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLT 120
           GG+GPF+G+C  VA FGVADAHV+GG+VGD++FM PEFMQSFFAGLAASGALTSGLRL+T
Sbjct: 113 GGVGPFIGICAIVAAFGVADAHVQGGMVGDMAFMCPEFMQSFFAGLAASGALTSGLRLIT 172

Query: 121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
           KAAF+KS +G RKGVMLFL I T  EF+C+LLYA+ FPKLPIVKY+RSKAASEGSKTVSA
Sbjct: 173 KAAFDKSKNGPRKGVMLFLGISTFAEFLCVLLYAYLFPKLPIVKYYRSKAASEGSKTVSA 232

Query: 181 DLAAAGIQTKA-AQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENT 239
           DLAAAGIQT A  QA D AK  ERLSNKQL  QN DYALDL+LIYVLTLSIFPGFLYENT
Sbjct: 233 DLAAAGIQTPADHQASDVAKSPERLSNKQLLFQNIDYALDLYLIYVLTLSIFPGFLYENT 292

Query: 240 GQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAK 299
           G+H+LG WY LVLIA YNV DLI+RY+PLV  +KLESRKGLMI IL RFLLVPAFYFTAK
Sbjct: 293 GEHQLGTWYPLVLIAVYNVLDLISRYLPLVPWLKLESRKGLMIAILSRFLLVPAFYFTAK 352

Query: 300 YGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
           YGDQGWMIFL SFLGLTNGYLTVCV+T+AP+GYK
Sbjct: 353 YGDQGWMIFLVSFLGLTNGYLTVCVLTIAPRGYK 386

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567449|ref|XP_002524704.1| nucleoside transporter, putative [Ricinus communis] gi|223536065|gb|EEF37723.1| nucleoside transporter, putative [Ricinus communis]

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 253/333 (75%), Positives = 293/333 (87%), Gaps = 3/333 (0%)

Query: 1   KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGE 60
            YHP+R LTLVYQPFALGT+AILAY ESKI+TRKRNI GYI+F  STL L+++ + T G+
Sbjct: 53  SYHPSRVLTLVYQPFALGTVAILAYYESKINTRKRNIAGYILFALSTLMLMVMAIVTPGK 112

Query: 61  GGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLT 120
            G+G F G+C  VA+FG+ADAHV+GG+VGDLS M PEF+QSFF G+AA+GALTSGLRL+T
Sbjct: 113 AGIGSFTGICAIVAVFGLADAHVQGGMVGDLSLMCPEFIQSFFGGMAAAGALTSGLRLIT 172

Query: 121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
           KAAF+K +DGLRKGVMLFLAI T  EF+C+++YAF FPKLPIVKY+R+KAASEGSKTVSA
Sbjct: 173 KAAFDKVNDGLRKGVMLFLAISTLVEFLCVIMYAFLFPKLPIVKYYRAKAASEGSKTVSA 232

Query: 181 DLAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTG 240
           DLAAAGIQ+   Q  D+ K YERLSNKQL +QN DYALDLFLIYVLTLSIFPGFLYENTG
Sbjct: 233 DLAAAGIQS---QGADDPKLYERLSNKQLVLQNIDYALDLFLIYVLTLSIFPGFLYENTG 289

Query: 241 QHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKY 300
           +H+LGEWY++VL+A YN WDLI RY+PLVKC+KLESRKGL I IL R+LL+PAFYFTAKY
Sbjct: 290 EHKLGEWYAVVLVAMYNFWDLIGRYVPLVKCIKLESRKGLTIAILARYLLIPAFYFTAKY 349

Query: 301 GDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
            DQGWMI LTSFLG+TNGYLTVCVMTVAPKGYK
Sbjct: 350 ADQGWMIMLTSFLGITNGYLTVCVMTVAPKGYK 382

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224076733|ref|XP_002304988.1| equilibrative nucleoside transporter [Populus trichocarpa] gi|222847952|gb|EEE85499.1| equilibrative nucleoside transporter [Populus trichocarpa]

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 260/343 (75%), Positives = 299/343 (87%), Gaps = 10/343 (2%)

Query: 1   KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGE 60
           KYHP+R LTLVYQPFALGTMA+L YNE+KI+TRKRNI GY++F ASTL L+++DL TSG+
Sbjct: 51  KYHPSRVLTLVYQPFALGTMALLTYNEAKINTRKRNIAGYMLFTASTLMLIVVDLVTSGK 110

Query: 61  GGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLT 120
           GG+GP++G+C  VA  GVADAHV+GG+VGDLSFM PEF+QSFFAGLAASGALTS LRLLT
Sbjct: 111 GGVGPYIGICAVVAALGVADAHVQGGMVGDLSFMCPEFVQSFFAGLAASGALTSALRLLT 170

Query: 121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
           KA FEKS +GLRKGVMLFLAI T  EF+ +LLYAF FP+LPIVKY+R+KAASEGSKTVSA
Sbjct: 171 KAVFEKSKNGLRKGVMLFLAISTFLEFLSVLLYAFLFPRLPIVKYYRAKAASEGSKTVSA 230

Query: 181 DLAAAGI----QTKAAQ------AEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSI 230
           DLAA GI      +A+Q      A D+ K  ERLSNK+LF+QN DYALDLFLIYVLTLSI
Sbjct: 231 DLAATGILKPENQEASQFRALLHAADDDKPPERLSNKELFLQNTDYALDLFLIYVLTLSI 290

Query: 231 FPGFLYENTGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLL 290
           FPGFLYE+TG+H+LG WYSLVL+A +NVWDLI+RYIPLV+C+KLESRKGLMI  L R+LL
Sbjct: 291 FPGFLYEDTGKHQLGSWYSLVLVAMFNVWDLISRYIPLVECLKLESRKGLMIASLSRYLL 350

Query: 291 VPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
           VPAFYFTAKYGDQGWMI LTSFLGLTNGYL+VCV+T APKGYK
Sbjct: 351 VPAFYFTAKYGDQGWMIMLTSFLGLTNGYLSVCVLTEAPKGYK 393

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495706|ref|XP_002270728.2| PREDICTED: equilibrative nucleoside transporter 2-like [Vitis vinifera]

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 251/333 (75%), Positives = 290/333 (87%), Gaps = 1/333 (0%)

Query: 1   KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGE 60
           +YHP+R LTLVYQPFALGTMA+LAYNE+KIDTRKRN+ GYI+F AST  L++LDLATSG 
Sbjct: 50  RYHPSRVLTLVYQPFALGTMALLAYNEAKIDTRKRNLAGYILFCASTFLLVVLDLATSGR 109

Query: 61  GGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLT 120
           GG+ P++G+CV V  FGVADAHV+GG+VGDLSFM PEF+QSF AGLAASGALTS LRL+T
Sbjct: 110 GGIAPYIGICVIVGAFGVADAHVQGGMVGDLSFMCPEFIQSFLAGLAASGALTSALRLMT 169

Query: 121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
           KAAF+KS  G RKG MLFL I T  EF+CI+LYAFFFPKLPIVK++R KAA EGSKTVSA
Sbjct: 170 KAAFDKSAGGERKGAMLFLGISTFLEFLCIILYAFFFPKLPIVKHYRRKAALEGSKTVSA 229

Query: 181 DLAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTG 240
           DLA  GIQT+ ++  D+ KQ ERLSNKQLF QN DYAL+LFLIYVLTLSIFPGFL+ENTG
Sbjct: 230 DLAVVGIQTQQSREVDDTKQQERLSNKQLFFQNIDYALELFLIYVLTLSIFPGFLFENTG 289

Query: 241 QHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKY 300
           +H+LG WY LVLIA YNVWD I+RYIPLVKC++L  RKGLM+ +L RFL +PAFYFTAKY
Sbjct: 290 KHQLGSWYPLVLIAMYNVWDFISRYIPLVKCLRLP-RKGLMVGVLARFLFIPAFYFTAKY 348

Query: 301 GDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
           GDQGWMI LTSFLG++NGYLTVC++T APKGYK
Sbjct: 349 GDQGWMIMLTSFLGVSNGYLTVCILTNAPKGYK 381

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745658|emb|CBI40869.3| unnamed protein product [Vitis vinifera]

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 251/333 (75%), Positives = 290/333 (87%), Gaps = 1/333 (0%)

Query: 1   KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGE 60
           +YHP+R LTLVYQPFALGTMA+LAYNE+KIDTRKRN+ GYI+F AST  L++LDLATSG 
Sbjct: 50  RYHPSRVLTLVYQPFALGTMALLAYNEAKIDTRKRNLAGYILFCASTFLLVVLDLATSGR 109

Query: 61  GGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLT 120
           GG+ P++G+CV V  FGVADAHV+GG+VGDLSFM PEF+QSF AGLAASGALTS LRL+T
Sbjct: 110 GGIAPYIGICVIVGAFGVADAHVQGGMVGDLSFMCPEFIQSFLAGLAASGALTSALRLMT 169

Query: 121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
           KAAF+KS  G RKG MLFL I T  EF+CI+LYAFFFPKLPIVK++R KAA EGSKTVSA
Sbjct: 170 KAAFDKSAGGERKGAMLFLGISTFLEFLCIILYAFFFPKLPIVKHYRRKAALEGSKTVSA 229

Query: 181 DLAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTG 240
           DLA  GIQT+ ++  D+ KQ ERLSNKQLF QN DYAL+LFLIYVLTLSIFPGFL+ENTG
Sbjct: 230 DLAVVGIQTQQSREVDDTKQQERLSNKQLFFQNIDYALELFLIYVLTLSIFPGFLFENTG 289

Query: 241 QHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKY 300
           +H+LG WY LVLIA YNVWD I+RYIPLVKC++L  RKGLM+ +L RFL +PAFYFTAKY
Sbjct: 290 KHQLGSWYPLVLIAMYNVWDFISRYIPLVKCLRLP-RKGLMVGVLARFLFIPAFYFTAKY 348

Query: 301 GDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
           GDQGWMI LTSFLG++NGYLTVC++T APKGYK
Sbjct: 349 GDQGWMIMLTSFLGVSNGYLTVCILTNAPKGYK 381

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447689|ref|XP_002276682.1| PREDICTED: equilibrative nucleoside transporter 4 [Vitis vinifera] gi|296081263|emb|CBI18007.3| unnamed protein product [Vitis vinifera]

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 254/333 (76%), Positives = 286/333 (85%), Gaps = 2/333 (0%)

Query: 1   KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGE 60
            YHP+R LTLVYQPFAL T+AIL Y E+KI+TR RN+ GY +FF STL +L+LDLATSG+
Sbjct: 52  DYHPSRVLTLVYQPFALVTIAILTYKEAKINTRLRNLFGYTLFFISTLLVLVLDLATSGK 111

Query: 61  GGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLT 120
           GGLG F+G+CV  A FG+ADAHV+GG+VGDLSFM PEFMQSF AGLAASGA+TSGLRL+T
Sbjct: 112 GGLGTFIGICVLSAAFGLADAHVQGGMVGDLSFMLPEFMQSFLAGLAASGAITSGLRLIT 171

Query: 121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
           KAAFE S DG RKG +LFL+I T FE  C++LYAF FPKLPIVKYFR+KAASEGSKTVSA
Sbjct: 172 KAAFENSRDGFRKGAILFLSISTFFELFCVILYAFVFPKLPIVKYFRAKAASEGSKTVSA 231

Query: 181 DLAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTG 240
           DLAA GIQT  A+ + E  Q ERLSNKQL +QN DYA+DLFLIY+LTLSIFPGFL E+TG
Sbjct: 232 DLAAGGIQTTGAEKDPE--QPERLSNKQLLLQNIDYAIDLFLIYILTLSIFPGFLSEDTG 289

Query: 241 QHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKY 300
            H LG WYSLVLIA YN WDLI RYIPL+KC+KL+SRKGLMI IL RFLL+PAFYFTAKY
Sbjct: 290 SHSLGSWYSLVLIAMYNGWDLIGRYIPLIKCIKLKSRKGLMIGILTRFLLIPAFYFTAKY 349

Query: 301 GDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
           GDQGWMI LTSFLGLTNGY TVCV+T APKGYK
Sbjct: 350 GDQGWMIMLTSFLGLTNGYFTVCVLTEAPKGYK 382

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147766692|emb|CAN71841.1| hypothetical protein VITISV_013398 [Vitis vinifera]

 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 252/331 (76%), Positives = 284/331 (85%), Gaps = 2/331 (0%)

Query: 1   KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGE 60
            YHP+R LTLVYQPFAL T+AIL Y E+KI+TR RN+ GY +FF STL +L+LDLATSG+
Sbjct: 38  DYHPSRVLTLVYQPFALVTIAILTYKEAKINTRLRNLFGYTLFFISTLLVLVLDLATSGK 97

Query: 61  GGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLT 120
           GGLG F+G+CV  A FG+ADAHV+GG+VGDLSFM PEFMQSF AGLAASGA+TSGLRL+T
Sbjct: 98  GGLGTFIGICVLSAAFGLADAHVQGGMVGDLSFMLPEFMQSFLAGLAASGAITSGLRLIT 157

Query: 121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
           KAAFE S DG RKG +LFL+I T FE  C++LYAF FPKLPIVKYFR+KAASEGSKTVSA
Sbjct: 158 KAAFENSRDGFRKGAILFLSISTFFELFCVILYAFVFPKLPIVKYFRAKAASEGSKTVSA 217

Query: 181 DLAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTG 240
           DLAA GIQT  A+ + E  Q ERLSNKQL +QN DYA+DLFLIY+LTLSIFPGFL E+TG
Sbjct: 218 DLAAGGIQTTGAEKDPE--QPERLSNKQLLLQNIDYAIDLFLIYILTLSIFPGFLSEDTG 275

Query: 241 QHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKY 300
            H LG WYSLVLIA YN WDLI RYIPL+KC+KL+SRKGLMI IL RFLL+PAFYFTAKY
Sbjct: 276 SHSLGSWYSLVLIAMYNGWDLIGRYIPLIKCIKLKSRKGLMIGILTRFLLIPAFYFTAKY 335

Query: 301 GDQGWMIFLTSFLGLTNGYLTVCVMTVAPKG 331
           GDQGWMI LTSFLGLTNGY TVCV+T APKG
Sbjct: 336 GDQGWMIMLTSFLGLTNGYFTVCVLTEAPKG 366

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334683129|emb|CBX87930.1| equilibrative nucleoside transporter 3 [Solanum tuberosum]

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 241/335 (71%), Positives = 287/335 (85%), Gaps = 2/335 (0%)

Query: 1   KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGE 60
            YHP+R LTL+YQPFALGT+AILAYNE+KI+TRKRN+ GY +FF +T  +L+LDLATSG+
Sbjct: 49  NYHPSRVLTLIYQPFALGTLAILAYNEAKINTRKRNLFGYTLFFIATFIVLVLDLATSGK 108

Query: 61  GGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLT 120
           GGLG F+G+CV    FGVADAHV+GG++GDLSFM PEF+QSF AGLAASGALTS LRL+T
Sbjct: 109 GGLGSFIGICVISGAFGVADAHVQGGMIGDLSFMLPEFLQSFLAGLAASGALTSSLRLIT 168

Query: 121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
           KAAF+ S DGLRKG +LF A+ T FE +C+LLYAF FPKLPIVK++R+KAASEGSKTV++
Sbjct: 169 KAAFDNSQDGLRKGAILFFAVSTLFELLCVLLYAFVFPKLPIVKFYRAKAASEGSKTVAS 228

Query: 181 DLAAAGIQTKAAQAEDE--AKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYEN 238
           DLAAAG+  +  + +DE   +Q ERL+NK+L +QN DYA+DLFLIY LTLSIFPGFL E+
Sbjct: 229 DLAAAGVYKQGPETKDEHDPQQVERLNNKELLLQNIDYAIDLFLIYALTLSIFPGFLSED 288

Query: 239 TGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTA 298
           TG H LG WY+LVLIA YNVWDLI RYIPL+KC+KLESRKGLM+ IL R L VPAFYFTA
Sbjct: 289 TGSHSLGSWYALVLIAMYNVWDLIGRYIPLIKCLKLESRKGLMVVILLRSLFVPAFYFTA 348

Query: 299 KYGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
           KYGDQGWMI LTS LG++NG+LTVCV+T APKGYK
Sbjct: 349 KYGDQGWMIMLTSLLGVSNGHLTVCVLTCAPKGYK 383

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224145557|ref|XP_002325685.1| equilibrative nucleoside transporter [Populus trichocarpa] gi|222862560|gb|EEF00067.1| equilibrative nucleoside transporter [Populus trichocarpa]

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 251/334 (75%), Positives = 287/334 (85%), Gaps = 1/334 (0%)

Query: 1   KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGE 60
            YHP+R LTLVYQPFALGT+A+L YNE+KI+TR RN+ GY +FF STL +L+LDLATSG+
Sbjct: 38  HYHPSRVLTLVYQPFALGTIAVLTYNEAKINTRLRNLFGYALFFLSTLLVLVLDLATSGK 97

Query: 61  GGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLT 120
           GG+G F+GVC     FGVADAHV+GG+VGDLSFM PEF+QSF AGLAASGALTS LRL+T
Sbjct: 98  GGIGTFIGVCAISGAFGVADAHVQGGMVGDLSFMQPEFIQSFLAGLAASGALTSALRLIT 157

Query: 121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
           KAAF+ S DGLRKG +LF AICT FE +C+LLYA+ FPKL IVK++RSKAASEGSKTVSA
Sbjct: 158 KAAFDNSQDGLRKGAILFFAICTFFELLCVLLYAYIFPKLDIVKHYRSKAASEGSKTVSA 217

Query: 181 DLAAAGIQT-KAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENT 239
           DLAA GIQT    +A+++ KQ ERLSNK+L +QN DYA+D+FLIYVLTLSIFPGFL E+T
Sbjct: 218 DLAAGGIQTLLKPEAQEDPKQLERLSNKELLLQNIDYAIDMFLIYVLTLSIFPGFLSEDT 277

Query: 240 GQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAK 299
           G H LG WY+LVLIA YNV DLI RYIPL+K +KLESRK LMI IL RFLLVPAFYFTAK
Sbjct: 278 GTHSLGGWYALVLIAMYNVCDLIGRYIPLLKFLKLESRKSLMIAILSRFLLVPAFYFTAK 337

Query: 300 YGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
           YGDQGWMI LTSFLGLTNGYLTVCV+T APKGYK
Sbjct: 338 YGDQGWMIMLTSFLGLTNGYLTVCVLTSAPKGYK 371

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116252|ref|XP_002317251.1| equilibrative nucleoside transporter [Populus trichocarpa] gi|222860316|gb|EEE97863.1| equilibrative nucleoside transporter [Populus trichocarpa]

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/334 (78%), Positives = 296/334 (88%), Gaps = 2/334 (0%)

Query: 1   KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGE 60
           KYHP+R LTLVYQPFALGTMAILAYNE+KI+TRKRNI GYI+F ASTL L+++DLATSG 
Sbjct: 52  KYHPSRVLTLVYQPFALGTMAILAYNEAKINTRKRNIAGYILFAASTLMLMVVDLATSGG 111

Query: 61  GGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLT 120
           GG+GPF+G+C  VA FGVADAHV+GG+VGD++FM PEFMQSFFAGLAASGALTS LRL+T
Sbjct: 112 GGIGPFIGICAIVAAFGVADAHVQGGMVGDMAFMCPEFMQSFFAGLAASGALTSALRLIT 171

Query: 121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
           KAAF+KS DG RKGVMLFL I    EF+C+LLYA+ FPKLPIVKY+RSKAASEGSKTVSA
Sbjct: 172 KAAFDKSKDGPRKGVMLFLGISIFLEFLCVLLYAYLFPKLPIVKYYRSKAASEGSKTVSA 231

Query: 181 DLAAAGIQTKAAQ-AEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENT 239
           DLAAAGIQT A Q A D AK  ERLSNKQL  QN DYALDL+LIYVLTLSIFPGF++ENT
Sbjct: 232 DLAAAGIQTPANQEAADVAKPPERLSNKQLIFQNIDYALDLYLIYVLTLSIFPGFVFENT 291

Query: 240 GQHRLG-EWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTA 298
           G+H+LG +WY LVLIA YNV DLI+RYIPLV  +KLESR GL+I +L RFLL+PAFYFTA
Sbjct: 292 GKHKLGNKWYPLVLIAMYNVLDLISRYIPLVPSLKLESRNGLLIAVLSRFLLIPAFYFTA 351

Query: 299 KYGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGY 332
           KYGDQGWMIFL SFLGLTNGYLTVCV+T+AP+GY
Sbjct: 352 KYGDQGWMIFLVSFLGLTNGYLTVCVLTIAPRGY 385

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	333
TAIR|locus:2115733	418	FUR1 "FUDR RESISTANT 1" [Arabi	0.993	0.791	0.614	2.3e-110
TAIR|locus:2115643	419	AT4G05140 [Arabidopsis thalian	0.993	0.789	0.598	3e-108
TAIR|locus:2115718	418	ENT6 "AT4G05110" [Arabidopsis	0.993	0.791	0.581	1.8e-103
TAIR|locus:2115753	418	ENT4 "AT4G05130" [Arabidopsis	0.993	0.791	0.581	1.8e-103
TAIR|locus:2100068	417	AT3G09990 [Arabidopsis thalian	0.984	0.786	0.507	7.5e-89
TAIR|locus:2200893	417	ENT7 "AT1G61630" [Arabidopsis	0.993	0.793	0.511	3.2e-88
TAIR|locus:2016119	450	ENT1 "equilibrative nucleotide	0.921	0.682	0.259	9.9e-23
TAIR|locus:2196070	389	AT1G02630 [Arabidopsis thalian	0.330	0.282	0.375	7.8e-17
DICTYBASE|DDB_G0283439	430	DDB_G0283439 "equilibrative nu	0.753	0.583	0.218	4.1e-08
DICTYBASE|DDB_G0281515	522	DDB_G0281515 "equilibrative nu	0.396	0.252	0.251	3.8e-07

TAIR|locus:2115733 FUR1 "FUDR RESISTANT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1090 (388.8 bits), Expect = 2.3e-110, P = 2.3e-110
 Identities = 204/332 (61%), Positives = 247/332 (74%)

Query:     2 YHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFXXXXXXXXXXXXXXGEG 61
             YHP+R LTLVYQPFALGT+ ILAY+ESKI+TRKRN+ GYI+F               G G
Sbjct:    51 YHPSRVLTLVYQPFALGTILILAYHESKINTRKRNLIGYILFTISTFLLIVLDLATKGRG 110

Query:    62 GLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQXXXXXXXXXXXXXXXXXXXXK 121
             G+GP++G+C  VA FG+ADA V+GG++GDLS M PE +Q                    K
Sbjct:   111 GIGPYIGLCAVVASFGLADATVQGGMIGDLSLMCPELVQSFMGGLAVSGALTSALRLITK 170

Query:   122 AAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSAD 181
             AAFEK++DG RKG M+FLAI T  E +C+ LYA+ FPKLPIVKY+R KAASEGSKTVSAD
Sbjct:   171 AAFEKTNDGPRKGAMMFLAISTCIELLCVFLYAYVFPKLPIVKYYRRKAASEGSKTVSAD 230

Query:   182 LXXXXXXXXXXXXEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQ 241
             L            +D++K  +RLSNK+L IQN DYA++LFLIYV TLSIFPGFLYENTGQ
Sbjct:   231 LAAAGIQNQSDLTDDDSKN-QRLSNKELLIQNIDYAVNLFLIYVCTLSIFPGFLYENTGQ 289

Query:   242 HRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYG 301
             H LG+WY+LVL+A YN WDL+ RY PLVK +K+E+RK + I +L R+LL+PAFYFTAKYG
Sbjct:   290 HGLGDWYALVLVAMYNCWDLVGRYTPLVKWLKIENRKLITIAVLSRYLLIPAFYFTAKYG 349

Query:   302 DQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
             DQGWMI L S LGLTNG+LTVC+MT+APKGYK
Sbjct:   350 DQGWMIMLISVLGLTNGHLTVCIMTIAPKGYK 381

GO:0005337 "nucleoside transmembrane transporter activity" evidence=IEA;ISS;IMP

GO:0006810 "transport" evidence=IEA

GO:0015864 "pyrimidine nucleoside transport" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0015858 "nucleoside transport" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2115643 AT4G05140 [Arabidopsis thaliana (taxid:3702)]

 Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
 Identities = 198/331 (59%), Positives = 239/331 (72%)

Query:     2 YHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFXXXXXXXXXXXXXXGEG 61
             YHP+R LT VYQPF++GT+ I AYNESKI+TRKRN+ GYI+F               G G
Sbjct:    51 YHPSRVLTFVYQPFSIGTIVIFAYNESKINTRKRNLIGYIVFTTSIFLLIILDLATKGHG 110

Query:    62 GLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQXXXXXXXXXXXXXXXXXXXXK 121
             G+GP++ +C  V  FG ADA VRGG++GDLS M PE +Q                    K
Sbjct:   111 GIGPYIVLCAIVGSFGFADASVRGGMIGDLSLMCPELIQSFVAGLAVAGALTSAFRLITK 170

Query:   122 AAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSAD 181
             AAFEK+HDGLRKG M+FLAI T  EF+C+LLYA+ FPKLPIVKY+RSKAASEGSKTV AD
Sbjct:   171 AAFEKTHDGLRKGAMIFLAISTLVEFLCVLLYAYVFPKLPIVKYYRSKAASEGSKTVYAD 230

Query:   182 LXXXXXXXXXXXXEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQ 241
             L             D+  + +RL+NK+L ++N DY ++LFLIYVLTLSI PGFLYENTGQ
Sbjct:   231 LAAAGIQNQSVLTADDVSKDKRLNNKELLLENVDYVVNLFLIYVLTLSILPGFLYENTGQ 290

Query:   242 HRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYG 301
             H LG WY+LVLIA YN WDL+ RYIP+VK + +E+RKGL + +L RFLLVPAFYFTAKYG
Sbjct:   291 HGLGSWYALVLIAMYNWWDLVGRYIPMVKWLNVENRKGLTVAVLTRFLLVPAFYFTAKYG 350

Query:   302 DQGWMIFLTSFLGLTNGYLTVCVMTVAPKGY 332
             DQGWMI L S LGLTNG+LTVC++  AP+GY
Sbjct:   351 DQGWMILLVSILGLTNGHLTVCILAKAPRGY 381

GO:0005337 "nucleoside transmembrane transporter activity" evidence=IEA;ISS

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2115718 ENT6 "AT4G05110" [Arabidopsis thaliana (taxid:3702)]

 Score = 1025 (365.9 bits), Expect = 1.8e-103, P = 1.8e-103
 Identities = 193/332 (58%), Positives = 235/332 (70%)

Query:     2 YHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFXXXXXXXXXXXXXXGEG 61
             YHP+R LTLVYQPFA G + ILAY+ESK  TRKRN+ GYI++               G G
Sbjct:    51 YHPSRVLTLVYQPFAFGAIVILAYHESKTSTRKRNLIGYILYTISTFLLIVLDLATKGRG 110

Query:    62 GLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQXXXXXXXXXXXXXXXXXXXXK 121
             G GP+ G+C  VA FG+ADA V+GG+ GDLS M PE +Q                    K
Sbjct:   111 GFGPYTGLCAVVAAFGLADATVQGGMFGDLSLMCPELVQSYMGGMAVAGALTSALRLITK 170

Query:   122 AAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSAD 181
             AAFEKS++GLRKG M+FLAI T  E + ++LYA+  PKLPIV Y+R KAAS+GSKTVSAD
Sbjct:   171 AAFEKSNNGLRKGAMMFLAISTCIELLSVMLYAYVLPKLPIVMYYRRKAASQGSKTVSAD 230

Query:   182 LXXXXXXXXXXXXEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQ 241
             L            +D++K  +RLS K+L  QN D+A++LFLIYV TLSIFPGFLYENTGQ
Sbjct:   231 LAAAGIQNQSDLSDDDSKN-QRLSKKELLFQNIDHAVNLFLIYVCTLSIFPGFLYENTGQ 289

Query:   242 HRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYG 301
             H LG WY+LVL+A YN WDL+ RY PLVK + +E+RK + I +L R+LL+PAFYFTAKYG
Sbjct:   290 HGLGAWYALVLVAMYNCWDLVGRYTPLVKWLNIENRKLITIAVLSRYLLIPAFYFTAKYG 349

Query:   302 DQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
             DQGWMI L S LGLTNG+LTVC+MT+APKGYK
Sbjct:   350 DQGWMIMLVSVLGLTNGHLTVCIMTIAPKGYK 381

GO:0005337 "nucleoside transmembrane transporter activity" evidence=ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0015858 "nucleoside transport" evidence=IDA

TAIR|locus:2115753 ENT4 "AT4G05130" [Arabidopsis thaliana (taxid:3702)]

 Score = 1025 (365.9 bits), Expect = 1.8e-103, P = 1.8e-103
 Identities = 193/332 (58%), Positives = 236/332 (71%)

Query:     2 YHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFXXXXXXXXXXXXXXGEG 61
             YHP+R  TL+YQP ALGT+ ILAY ESKI TRKR +TGYI+F               G G
Sbjct:    51 YHPSRVFTLIYQPIALGTIMILAYRESKISTRKRILTGYILFTISTFLLIVLDLTTKGHG 110

Query:    62 GLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQXXXXXXXXXXXXXXXXXXXXK 121
             G+G ++ +C  VA FG+ADA V+GG+VGDLS M PE +Q                    K
Sbjct:   111 GIGHYIVLCTIVASFGLADATVKGGLVGDLSLMCPELIQSYMAGSGMAGALTSVLRLITK 170

Query:   122 AAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSAD 181
             AAFEKS++ LRKG M+FLAI T  E +C++LYA+ FPKLPIVKY+R KAASEGSKTV AD
Sbjct:   171 AAFEKSNNSLRKGAMIFLAISTFIELLCVILYAYVFPKLPIVKYYRRKAASEGSKTVVAD 230

Query:   182 LXXXXXXXXXXXXEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQ 241
             L            +D++K  + L  K+L +QN D+A++LFLIYVLTLSIFPGFLYENTGQ
Sbjct:   231 LAAAGIQNLSDLSDDDSKN-QMLRKKELLLQNIDHAVNLFLIYVLTLSIFPGFLYENTGQ 289

Query:   242 HRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYG 301
             H LG+WY+L+L+A+YN WDL  RY PLVK +KLE+RK L I +L R+ LVPAFYFTAKYG
Sbjct:   290 HGLGDWYALILVATYNFWDLFGRYAPLVKWLKLENRKALTIAVLTRYFLVPAFYFTAKYG 349

Query:   302 DQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK 333
             D+GWMI L S LGLT G+LTVC+MT+AP GYK
Sbjct:   350 DKGWMIMLVSILGLTTGHLTVCIMTIAPNGYK 381

GO:0005337 "nucleoside transmembrane transporter activity" evidence=ISS;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0015858 "nucleoside transport" evidence=IDA

TAIR|locus:2100068 AT3G09990 [Arabidopsis thaliana (taxid:3702)]

 Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
 Identities = 167/329 (50%), Positives = 225/329 (68%)

Query:     2 YHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFXXXXXXXXXXXXXXGEG 61
             YHP+R LT++YQ F++G +++L + E++++TR+RN+ GY +F               G G
Sbjct:    50 YHPSRILTIIYQSFSIGALSVLVHKEARLNTRRRNLFGYSLFSLGSLAVLVLNLATSGRG 109

Query:    62 GLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQXXXXXXXXXXXXXXXXXXXXK 121
             G+G F+GVCV  A FG+ADAHV GG++GDLS M PEF+Q                    K
Sbjct:   110 GIGSFIGVCVISAAFGLADAHVYGGMIGDLSMMTPEFLQSFLAGLAASGALTSGLRLVIK 169

Query:   122 AAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSAD 181
             AAF+ S DGLRKG  LF A+  SFE VC+LLYA+ FP++P+VKY+R+KA  +GS+TV AD
Sbjct:   170 AAFKNSRDGLRKGATLFFAMSASFELVCVLLYAYVFPRIPVVKYYRAKAIIQGSRTVWAD 229

Query:   182 LXXXXXXXXXXXXEDEAKQYE-RLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTG 240
             L            ++EA +Y+ RL+   L +   D A+ LFL+Y+LT SIFPGFL E+TG
Sbjct:   230 LAAGGIQVQPITQDEEALRYDHRLNKGDLMLLYSDLAVTLFLVYLLTFSIFPGFLSEDTG 289

Query:   241 QHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKY 300
             ++ LG+WY+LVLIA +NV DL+ RY+P+VK +K++SRK L+IT L R LL+PAF  T  Y
Sbjct:   290 KYSLGDWYALVLIAVFNVSDLVGRYVPMVKKLKMKSRKCLLITSLGRLLLIPAFNITGIY 349

Query:   301 GDQGWMIFLTSFLGLTNGYLTVCVMTVAP 329
             G QGWMIFL S LGL+NGYLTVCV+T AP
Sbjct:   350 GSQGWMIFLMSVLGLSNGYLTVCVITSAP 378

GO:0005337 "nucleoside transmembrane transporter activity" evidence=IEA;ISS

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2200893 ENT7 "AT1G61630" [Arabidopsis thaliana (taxid:3702)]

 Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
 Identities = 171/334 (51%), Positives = 221/334 (66%)

Query:     1 KYHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFXXXXXXXXXXXXXXGE 60
             KYHP+R LT+VYQ  A   +  LA  E+K++TR RNI GY ++               G 
Sbjct:    48 KYHPSRVLTIVYQLVANVFIITLATKEAKLNTRLRNIFGYSLYTAGTFCLIILDLASHGS 107

Query:    61 GGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQXXXXXXXXXXXXXXXXXXXX 120
             G +  ++ +C+ VALFG+ADA V+G +VGDLSFM P+F+Q                    
Sbjct:   108 GSVVAYVLLCLIVALFGLADAFVQGAMVGDLSFMSPDFIQAFMAGLGIAGALTSVLRLIT 167

Query:   121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
             KA F+ S DGLRKG +LF+ I T  E  C+ LY   F KLPIVKY+R+KA  EG+KTVSA
Sbjct:   168 KAIFDNSPDGLRKGALLFIGIATLIELACVFLYTLVFAKLPIVKYYRAKAGKEGAKTVSA 227

Query:   181 DLXXXXXXXXXXXXE--DEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYEN 238
             DL               DE+K  ++L+ KQL  +N D  ++L LIYV+TLSIFPGFLYEN
Sbjct:   228 DLAAAGLQEQAEQVHQMDESK-IQKLTKKQLLRENIDLGINLSLIYVVTLSIFPGFLYEN 286

Query:   239 TGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTA 298
             TG+HRLG+WY+ VL+A YN WD I+R+IP +K + +ESRK + + ++ R LLVPAFYFTA
Sbjct:   287 TGEHRLGDWYAPVLVAMYNGWDAISRFIPSIKPLAMESRKWITVCVVARLLLVPAFYFTA 346

Query:   299 KYGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGY 332
             KY DQGWM+FLTSFLGL+NGYLTVC+ + APKGY
Sbjct:   347 KYADQGWMLFLTSFLGLSNGYLTVCIFSTAPKGY 380

GO:0005337 "nucleoside transmembrane transporter activity" evidence=ISS;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015858 "nucleoside transport" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2016119 ENT1 "equilibrative nucleotide transporter 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 9.9e-23, P = 9.9e-23
 Identities = 87/335 (25%), Positives = 144/335 (42%)

Query:     6 RALTLVYQPFALGTMAILA--YNESKIDTRKRNITGYIIFFXXXXXXXXXXXXXXGEGGL 63
             R   ++Y   AL  + ++   Y    + + + N+ G ++F                +G +
Sbjct:   100 RIFAVIYMLVALVCLFVIVVFYAHKSLASFRINL-GLLLFVIALLVVPVLDLVYV-KGQV 157

Query:    64 GPFLGVCVF---VALFGVADAHVRGGIVGDLSFMYPEFMQXXXXXXXXXXXXXXXXXXXX 120
             G + G  V    VAL G+ DA ++GG++G    M   +MQ                    
Sbjct:   158 GLYAGFDVTSAAVALSGLGDALMQGGLIGVAGEMPERYMQAVVAGTAGSGVLVSLLRILT 217

Query:   121 KAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSA 180
             KA + +  DGLRK   L+ A+      +C + Y     KLP++K+   +   E  +  S 
Sbjct:   218 KAVYPQDPDGLRKSANLYFAVGIVVMVICAVFYNVAH-KLPVIKFHEERKNEELIREKSE 276

Query:   181 DLXXXXXXXXXXXXEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTG 240
             +              D   + +             +   + L+Y++TLSIFPG++ E+  
Sbjct:   277 EKGSLTGLAWRTTLWDIVTKVK------------SHGFGIVLLYMVTLSIFPGYITEDVH 324

Query:   241 QHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKY 300
                L +WY ++LIA+YNV+DL+ + +  V    LE  K  +   + R L  P F+    +
Sbjct:   325 SELLTDWYPILLIAAYNVFDLVGKCLTAV--FMLEDEKIAVGGSIARLLFYPLFW-GCLH 381

Query:   301 GDQGW-----MIFLTSFLGLTNGYLTVCVMTVAPK 330
             G         +  LT  LGLTNGYLT  +M +APK
Sbjct:   382 GPMFLRTEIPVTILTCLLGLTNGYLTSVLMILAPK 416

GO:0005337 "nucleoside transmembrane transporter activity" evidence=IEA;ISS

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0010174 "nucleoside transmembrane transporter activity, against a concentration gradient" evidence=IGI

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2196070 AT1G02630 [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
 Identities = 45/120 (37%), Positives = 62/120 (51%)

Query:   217 ALDLFLIYVLTLSIFPGFLYENTGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLES 276
             A  + +IY +TLSIFPGF+ EN     L  WY ++LI  YN+ D + +   L      +S
Sbjct:   240 ASGMLIIYSVTLSIFPGFIAENLKSQLLQSWYPILLITVYNISDFVGK--SLTALYLWQS 297

Query:   277 RKGLMITILCRFLLVPAFYFTAKYGDQGWM------IFLTSFLGLTNGYLTVCVMTVAPK 330
              K      + R L  P F    + G + W+      + LT  LGLTNGYLT  +M +APK
Sbjct:   298 IKSATWACIVRLLFYPLFSACLR-GPK-WLRTEVPVVVLTFMLGLTNGYLTSVLMIMAPK 355

GO:0005337 "nucleoside transmembrane transporter activity" evidence=IEA;ISS

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0283439 DDB_G0283439 "equilibrative nucleoside transporter (ENT) family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 151 (58.2 bits), Expect = 4.1e-08, P = 4.1e-08
 Identities = 59/270 (21%), Positives = 107/270 (39%)

Query:    69 VCVFVALFGVADAHVRGGIVGDLSFMYP-EFMQXXXXXXXXXXXXXXXXXXXXKAAFEKS 127
             +C F +  G   + + G ++G L  ++P E+                      K +   +
Sbjct:   126 LCTFAS--GCLASLLFGTVLG-LVALFPGEYTGAVMSGNGVAGMIAMALQIITKVSVPAT 182

Query:   128 HDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTV-SADLXXXX 186
               G ++  ++F  +      +C+L +     +LPI KY+   A  E SK   +  +    
Sbjct:   183 AHGNQESGLIFFFLAGGVLIICLLCFLVLL-QLPITKYYL--ANFEASKLKENGSVNGIE 239

Query:   187 XXXXXXXXEDEAKQYE-RLSNKQLFIQNFDYALDLFLIYVLTLSIFPGF--LYENTGQHR 243
                     +  A+Q+   L N  +  + +  AL +F ++  TLSIFPG   L + + +H+
Sbjct:   240 SGDGDAKPKKSARQWMGELLN--ILKKVWREALVVFTVFFTTLSIFPGLTQLIQTSNEHQ 297

Query:   244 LG-EWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAK--- 299
             L  +W+ +V  + + V D I R +P  K   + +   L I    R    P F    K   
Sbjct:   298 LSSDWFIIVFFSIFMVGDFIGRTVP--KWFIIFTPSNLWIPTFLRLAFFPLFALCIKPLV 355

Query:   300 YGDQGWMIFLTSFLGLTNGYLTVCVMTVAP 329
             + +  W         ++NGY     M   P
Sbjct:   356 FNNNAWYFVFMFIFSISNGYCGTLAMIFGP 385

GO:0016021 "integral to membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005337 "nucleoside transmembrane transporter activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

DICTYBASE|DDB_G0281515 DDB_G0281515 "equilibrative nucleoside transporter (ENT) family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 114 (45.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
 Identities = 36/143 (25%), Positives = 72/143 (50%)

Query:   197 EAKQYERLSN--KQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTGQHRLGEWYSLVLIA 254
             E   +E + +  K  F +N  Y+  L  ++ +TL +FPG + +         W+   LIA
Sbjct:   343 EIDNFEEIYSPFKFTFKKNLKYSAMLSFLFTMTLFVFPGIVIQIKSDRIERSWWIFSLIA 402

Query:   255 SYNVWDLIARYIPLV---KCVKLESRKGL-MITI-LCRFLL--VPAFYFTAKYGDQGWMI 307
              YN+ D + + +PL+      ++ S   L  I+I  C F++  + A Y++  +  +  +I
Sbjct:   403 VYNIADSLGKALPLIVHKNDKRIPSVPWLWFISIGRCIFIVFFIIANYYSNIFTHES-LI 461

Query:   308 FLTSFL-GLTNGYLTVCVMTVAP 329
             +L  F+   +NGY++   ++ +P
Sbjct:   462 YLFLFIFAFSNGYISSIALSQSP 484

GO:0016021 "integral to membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005337 "nucleoside transmembrane transporter activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9M0Y3	ENT3_ARATH	No assigned EC number	0.7018	0.9939	0.7918	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	333
pfam01733	305	pfam01733, Nucleoside_tran, Nucleoside transporter	5e-17
TIGR00939	437	TIGR00939, 2a57, Equilibrative Nucleoside Transpor	6e-17

>gnl|CDD|216670 pfam01733, Nucleoside_tran, Nucleoside transporter

 Score = 79.8 bits (197), Expect = 5e-17
 Identities = 58/276 (21%), Positives = 99/276 (35%), Gaps = 26/276 (9%)

Query: 73  VALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLR 132
           + +    +A ++  + G        + Q+   G   +G L S L +LTKA    S+  L 
Sbjct: 4   IVVINSGNALLQNSLFGLAGEFPSTYTQAVMIGQNLAGVLVSLLMILTKA----SNSDLS 59

Query: 133 KGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFRSKAASEGSKTVSADLAAAGIQTKAA 192
           +   L+         VC +       KL   KY+      E ++ +      +       
Sbjct: 60  ESAFLYFGTALVVVVVCAISL-NVLKKLRFYKYYWQLKERETNEELEQVDEESSGSNLNG 118

Query: 193 QAEDEAKQYERLSNKQLFI-QNFDY-ALDLFLIYVLTLSIFPGFLYENTGQHRLGEWYS- 249
             ++   Q E +          F   AL + LI+ +TLS+FP    E      L  W   
Sbjct: 119 TFDNSKPQLENVFKPFFVTLTKFPVLALSVVLIFTVTLSVFPAPTAEVVSS--LPTWEKQ 176

Query: 250 ----LVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQG- 304
               ++    +N++DL+ R +        +  + L +  + R L +P F     Y  Q  
Sbjct: 177 YFMPVLCFLLFNLFDLLGRSLAAWFMWPGQDPRWLPVLSILRLLFIPLFLL-CNYKPQSR 235

Query: 305 ----------WMIFLTSFLGLTNGYLTVCVMTVAPK 330
                       I L +    +NGYL+   M  APK
Sbjct: 236 ALPVFFESDWLFIILMALFAFSNGYLSSLAMMYAPK 271

This is a family of nucleoside transporters. In mammalian cells nucleoside transporters transport nucleoside across the plasma membrane and are essential for nucleotide synthesis via the salvage pathways for cells that lack their own de novo synthesis pathways. Also in this family is mouse and human nucleolar protein HNP36, a protein of unknown function; although it has been hypothesised to be a plasma membrane nucleoside transporter. Length = 305

>gnl|CDD|233199 TIGR00939, 2a57, Equilibrative Nucleoside Transporter (ENT)

 Score = 80.9 bits (200), Expect = 6e-17
 Identities = 62/321 (19%), Positives = 115/321 (35%), Gaps = 38/321 (11%)

Query: 41  IIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQ 100
           ++     + L+ +          G F+     V +     A ++G + G        +  
Sbjct: 86  LVVVILVMVLVKVQT-----SETGFFVTTMASVVIINSGMALLQGSLFGLAGVFPSTYSS 140

Query: 101 SFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKL 160
           +  +G   +G LTS   +L KA+   SH GL+K  + +       + +CI+ Y    PKL
Sbjct: 141 AVMSGQGLAGVLTSLAMILVKASGNDSH-GLKKSALGYFGTPCVVQLICIVCY-LLLPKL 198

Query: 161 PIVKYFRSKAASEGSKTVSAD---LAAAGIQTKAAQAEDEAKQYERLSNKQ--------- 208
           P  +Y+  K   +G+          + A         +  +        K+         
Sbjct: 199 PFARYYLQKKLDKGAGEDETKGELRSKAEQNGIPHGGDQPSPTLVLDWEKEPESPDEPQK 258

Query: 209 --------LFIQNFDYALDLFLIYVLTLSIFPGFLYENT--GQHRLGEWYSLVLIASYNV 258
                   +F + +  A  +  ++ +TLS+FP      T  G      +Y ++    +N+
Sbjct: 259 PLKTSVWVVFTKVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLGLSNWFYPIICFLLFNL 318

Query: 259 WDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAF---------YFTAKYGDQGWMIFL 309
           +D + R +        E  + L I    R L +P F              +    + I L
Sbjct: 319 FDWLGRSLTSKFMWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIIL 378

Query: 310 TSFLGLTNGYLTVCVMTVAPK 330
               G +NGYL    M +AP+
Sbjct: 379 MLLFGFSNGYLGSLSMCLAPR 399

[Transport and binding proteins, Nucleosides, purines and pyrimidines]. Length = 437

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	333
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	100.0
KOG1479	406	consensus Nucleoside transporter [Nucleotide trans	100.0
PF01733	309	Nucleoside_tran: Nucleoside transporter; InterPro:	100.0
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	99.72
KOG3880	409	consensus Predicted small molecule transporter inv	99.06
KOG4255	439	consensus Uncharacterized conserved protein [Funct	98.51
TIGR00898	505	2A0119 cation transport protein.	97.68
TIGR00893	399	2A0114 d-galactonate transporter.	97.67
TIGR00895	398	2A0115 benzoate transport.	97.56
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	97.48
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	97.17
TIGR00900	365	2A0121 H+ Antiporter protein.	97.12
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	97.11
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	97.07
TIGR00891	405	2A0112 putative sialic acid transporter.	97.06
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	97.06
PRK10642	490	proline/glycine betaine transporter; Provisional	97.05
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	97.03
PRK11663	434	regulatory protein UhpC; Provisional	97.02
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	96.87
PRK03699	394	putative transporter; Provisional	96.68
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	96.59
PRK03545	390	putative arabinose transporter; Provisional	96.59
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	96.56
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	96.47
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	96.44
PLN00028	476	nitrate transmembrane transporter; Provisional	96.43
TIGR00892	455	2A0113 monocarboxylate transporter 1.	96.4
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	96.33
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	96.22
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	96.19
KOG0569	485	consensus Permease of the major facilitator superf	96.14
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	96.05
PRK10489	417	enterobactin exporter EntS; Provisional	95.98
PRK09952	438	shikimate transporter; Provisional	95.95
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	95.92
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	95.81
PRK12382	392	putative transporter; Provisional	95.75
PRK10213	394	nepI ribonucleoside transporter; Reviewed	95.69
PRK10091	382	MFS transport protein AraJ; Provisional	95.43
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	95.41
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	95.38
TIGR00901	356	2A0125 AmpG-related permease.	95.36
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	95.35
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	95.04
PRK05122	399	major facilitator superfamily transporter; Provisi	94.99
PRK10133	438	L-fucose transporter; Provisional	94.87
PRK10077	479	xylE D-xylose transporter XylE; Provisional	94.81
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	94.65
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	94.63
PRK10473	392	multidrug efflux system protein MdtL; Provisional	94.34
TIGR00896	355	CynX cyanate transporter. This family of proteins	94.33
KOG2533	495	consensus Permease of the major facilitator superf	94.17
PLN00028	476	nitrate transmembrane transporter; Provisional	94.16
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	93.96
TIGR00805	633	oat sodium-independent organic anion transporter.	93.93
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	93.69
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	93.36
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	93.24
PRK12307	426	putative sialic acid transporter; Provisional	93.05
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	92.9
PRK11902	402	ampG muropeptide transporter; Reviewed	92.67
PRK15011	393	sugar efflux transporter B; Provisional	92.59
PRK11652	394	emrD multidrug resistance protein D; Provisional	92.54
PRK11043	401	putative transporter; Provisional	92.41
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	92.37
PRK09874	408	drug efflux system protein MdtG; Provisional	91.82
KOG3764	464	consensus Vesicular amine transporter [Intracellul	90.98
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	90.81
PRK09848	448	glucuronide transporter; Provisional	90.12
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	90.1
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	89.45
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	88.49
PRK10054	395	putative transporter; Provisional	88.05
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	87.99
KOG2532	466	consensus Permease of the major facilitator superf	87.87
PRK10429	473	melibiose:sodium symporter; Provisional	87.21
PRK09705	393	cynX putative cyanate transporter; Provisional	85.91
PRK10504	471	putative transporter; Provisional	85.65
PRK09528	420	lacY galactoside permease; Reviewed	85.15
PRK09669	444	putative symporter YagG; Provisional	84.5
PRK15403	413	multidrug efflux system protein MdtM; Provisional	84.34
PRK10489	417	enterobactin exporter EntS; Provisional	83.81
PF13347	428	MFS_2: MFS/sugar transport protein	83.72
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	83.24
PRK09669	444	putative symporter YagG; Provisional	83.19
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	82.78
PF13347	428	MFS_2: MFS/sugar transport protein	82.37
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	82.29
PRK10406	432	alpha-ketoglutarate transporter; Provisional	81.48
PRK09584	500	tppB putative tripeptide transporter permease; Rev	81.1
PRK11010	491	ampG muropeptide transporter; Validated	80.99
PRK14995	495	methyl viologen resistance protein SmvA; Provision	80.41

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=100.00  E-value=2.2e-64  Score=495.95  Aligned_cols=328  Identities=23%  Similarity=0.374  Sum_probs=268.4

Q ss_pred             CCCCceehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhH
Q 036062            2 YHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADA   81 (333)
Q Consensus         2 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~   81 (333)
                      +|+++++++++++++++..+.+...++|++.+.|+..+++++++..++...+...  +.+...+|+++|+++++.|++++
T Consensus        44 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~--~~~~~~~f~~~~~~v~~~g~~~~  121 (437)
T TIGR00939        44 KHFNTYYTLASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKV--QTSETGFFVTTMASVVIINSGMA  121 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeee--cCCcchHHHHHHHHHHHHHhhhh
Confidence            3678899999999999999999999999999999999988755444443332111  11234689999999999999999


Q ss_pred             hhccchhhhcccCChHHHHHHHhhhhhhhHHHHHHHHHHHhhccCCccccchhhhHHhHHHHHHHHHHHHHHHHHcCCCh
Q 036062           82 HVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLP  161 (333)
Q Consensus        82 ~~q~s~~gla~~~p~~~~~a~~~Gqg~aGi~~s~~~ii~~~~~~~~~~~~~~s~~iyF~~a~~~~~~~~~~~~~~l~k~~  161 (333)
                      +.||+.+|++|.||++|+|++|+|||+||+++|++|++++++.+|++ +.+.++++||+++++++++|+++|. .++|+|
T Consensus       122 ~~q~s~~gla~~fp~~~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~-~~~~~a~~YF~~a~~v~l~~i~~~~-~l~k~~  199 (437)
T TIGR00939       122 LLQGSLFGLAGVFPSTYSSAVMSGQGLAGVLTSLAMILVKASGNDSH-GLKKSALGYFGTPCVVQLICIVCYL-LLPKLP  199 (437)
T ss_pred             hhcccchhhcccCCHHHHHHHHhcchhHHHHHHHHHHHHHHhcCCcc-chhhhhhhHHHHHHHHHHHHHHHHH-HHhcCH
Confidence            99999999999999999999999999999999999999999877755 7899999999999999999999999 999999


Q ss_pred             HHHHHHHhhhhc--CCCCccchhhhh---------cccCcc--------chh-hhhHHhhhhccHHHHHHHHHHHHHHHH
Q 036062          162 IVKYFRSKAASE--GSKTVSADLAAA---------GIQTKA--------AQA-EDEAKQYERLSNKQLFIQNFDYALDLF  221 (333)
Q Consensus       162 ~~~~~~~~~~~~--~~~~~~~d~~~~---------~~~~~~--------~~~-~~~~~~~~~~~~~~v~~~i~~~~~~i~  221 (333)
                      ++|||.++...+  ++++.+++..++         .++.+.        +.| ++++++.++.++++++||+|++++++|
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~kki~~~~~~vf  279 (437)
T TIGR00939       200 FARYYLQKKLDKGAGEDETKGELRSKAEQNGIPHGGDQPSPTLVLDWEKEPESPDEPQKPLKTSVWVVFTKVWLLAFSVV  279 (437)
T ss_pred             HHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccCCccchhcccCcHHHHHHHHHHHHHHHH
Confidence            999998654221  011100000000         000000        000 111223346789999999999999999


Q ss_pred             HHhhhhceeccceeeecccccc-CCc-hHHHHHHHHHHHHHHhhhhhcccccccccCcchHHHHHHHHHHHHHHHHhhhh
Q 036062          222 LIYVLTLSIFPGFLYENTGQHR-LGE-WYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAK  299 (333)
Q Consensus       222 l~f~vTl~vFPgi~~~~~~~~~-~~~-w~~~~~~~~fNlgD~iGR~l~~~~~~~~~~~~~l~~~~~~R~ifiplf~lc~~  299 (333)
                      ++|++||++|||+++++++.+. .++ |++++++++||+||++||.++.+..+|.+++|++++++++|++|||+|++||+
T Consensus       280 ~~F~vTL~vFPgv~~~i~~~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~~p~~~~~~l~i~s~~R~iFIPlf~lcn~  359 (437)
T TIGR00939       280 FVFTVTLSVFPAITTAVTSSGLGLSNWFYPIICFLLFNLFDWLGRSLTSKFMWPDEDSRWLPILSFLRVLFIPLFLLCNY  359 (437)
T ss_pred             HHHHHHHHhcCceEEEeeccCCCCCccHHHHHHHHHHHHHHHHHhhhhheeEeeCCCccchHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999998877654 345 58999999999999999999998877665666999999999999999999996


Q ss_pred             c---------CchhHHHHHHHHHhhhcchhhhhhhcccCCCCC
Q 036062          300 Y---------GDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK  333 (333)
Q Consensus       300 ~---------~~d~~~~i~~~lfgltNGy~~t~~m~~~P~~~~  333 (333)
                      .         ++|+++++++++||+||||++|++||+||++++
T Consensus       360 ~~~~~~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~  402 (437)
T TIGR00939       360 PQRSRLPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVD  402 (437)
T ss_pred             CccccCCeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCC
Confidence            3         689999999999999999999999999999864

>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]

Probab=100.00  E-value=1.6e-63  Score=475.72  Aligned_cols=309  Identities=37%  Similarity=0.596  Sum_probs=259.5

Q ss_pred             CCCCceehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHH---HHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhh
Q 036062            2 YHPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIF---FASTLALLLLDLATSGEGGLGPFLGVCVFVALFGV   78 (333)
Q Consensus         2 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~   78 (333)
                      ++|++++++++++|+++...+|.+...|  .+.|+..++.+.   ++.++.++.++   .+..+.++|.++|++++++|.
T Consensus        55 ~~F~~~~~~~a~i~~ll~~~~n~~~~~~--~~~~~~~~l~~~~il~i~~l~~~~v~---~~~~~~~ff~vt~~~vv~~~~  129 (406)
T KOG1479|consen   55 KNFTSSYTLAAQIPLLLFNLLNAFLNTR--LRTRVGYLLSLIAILFIVTLDLALVK---TDTWTNGFFLVTLIIVVLLNL  129 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhc---cCCccchhHHHHHHHHHHHhh
Confidence            4688899999999999999999998888  444444444332   22222233333   344568999999999999999


Q ss_pred             hhHhhccchhhhcccCChHHHHHHHhhhhhhhHHHHHHHHHHHhhccCCccccchhhhHHhHHHHHHHHHHHHHHHHHcC
Q 036062           79 ADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFP  158 (333)
Q Consensus        79 ~~~~~q~s~~gla~~~p~~~~~a~~~Gqg~aGi~~s~~~ii~~~~~~~~~~~~~~s~~iyF~~a~~~~~~~~~~~~~~l~  158 (333)
                      ++|++|||+||++|.||+||+||+|+||++||+++|++|+++|++.+|    .++++++||+++.+++++|+++|. .++
T Consensus       130 a~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~~~----~~~sA~~yF~~s~~~~llC~i~y~-~l~  204 (406)
T KOG1479|consen  130 ANAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSLLRILTKAAFSD----SRTSALIYFITSTVILLLCFVLYL-VLP  204 (406)
T ss_pred             hhhhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHHHHHHHHHhcCC----CCceeehhHHHHHHHHHHHHHHHH-Hhh
Confidence            999999999999999999999999999999999999999999999765    359999999999999999999999 999


Q ss_pred             CChHHHHHHHhhhhcCCCCccchhhhhcccCccchhhhhHHhhhhccHHHHHHHHHHHHHHHHHHhhhhceeccceeeec
Q 036062          159 KLPIVKYFRSKAASEGSKTVSADLAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYEN  238 (333)
Q Consensus       159 k~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~i~l~f~vTl~vFPgi~~~~  238 (333)
                      |+|++|||++++.+++++     .+++++|++.+.+++      ..+.|+++||+|.++++++++|+|||++|||+++++
T Consensus       205 ~lpf~~yy~~~~~~~~~~-----l~~~~~~~~~~~~~~------~~~~~~i~~k~~~~~~~i~lvy~VTLsiFPg~~~~~  273 (406)
T KOG1479|consen  205 KLPFVRYYREKAGSIGSK-----LAAEGIESDSSLSNE------DDSLWDIFKKIKDLAFNIFLVYFVTLSIFPGFCSEV  273 (406)
T ss_pred             cchHHHHHhhhccccccc-----ccccccccccccccc------cchHHHHHHHHHHHhhchheeeeeeeEecchhhccc
Confidence            999999998876654332     111222222111111      118999999999999999999999999999999999


Q ss_pred             cccccCCchHHHHHHHH-HHHHHHhhhhhcccccccccCcchHHHHHHHHHHHHHHHHhhhh------cCchhHHHHHHH
Q 036062          239 TGQHRLGEWYSLVLIAS-YNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAK------YGDQGWMIFLTS  311 (333)
Q Consensus       239 ~~~~~~~~w~~~~~~~~-fNlgD~iGR~l~~~~~~~~~~~~~l~~~~~~R~ifiplf~lc~~------~~~d~~~~i~~~  311 (333)
                      ++.+..++|++.+...+ ||++|++||.++.+.++  +++|.+++++++|++|||+|.+||+      +++|+|+++++.
T Consensus       274 ~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~--~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~  351 (406)
T KOG1479|consen  274 KSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTW--PDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMS  351 (406)
T ss_pred             ccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccC--CCCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHH
Confidence            88777789998776666 99999999999998655  5799999999999999999999997      679999999999


Q ss_pred             HHhhhcchhhhhhhcccCCCCC
Q 036062          312 FLGLTNGYLTVCVMTVAPKGYK  333 (333)
Q Consensus       312 lfgltNGy~~t~~m~~~P~~~~  333 (333)
                      +||+||||+++++|++||+++|
T Consensus       352 ~lglsnGYltsl~m~~aPk~v~  373 (406)
T KOG1479|consen  352 LLGLSNGYLTSLIMMYAPKQVK  373 (406)
T ss_pred             HHHhccchHhhheehhcCCCCC
Confidence            9999999999999999999986

>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs

Probab=100.00  E-value=5e-58  Score=433.31  Aligned_cols=259  Identities=27%  Similarity=0.521  Sum_probs=4.0

Q ss_pred             HHHHHHHhhhhHhhccchhhhcccCChHHHHHHHhhhhhhhHHHHHHHHHHHhhccCCccccchhhhHHhHHHHHHHHHH
Q 036062           70 CVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVC  149 (333)
Q Consensus        70 l~~v~~~g~~~~~~q~s~~gla~~~p~~~~~a~~~Gqg~aGi~~s~~~ii~~~~~~~~~~~~~~s~~iyF~~a~~~~~~~  149 (333)
                      |+.++++|++++++|||+||++|.||++|+|++|+|||+||+++|++|+++++..++    ++.++++||+++++++++|
T Consensus         1 m~~v~~~~~~~~~~q~s~~glas~~p~~y~~a~~~Gq~~aGv~~s~l~ii~~~~~~~----~~~~a~~yF~~a~~i~i~~   76 (309)
T PF01733_consen    1 MISVALIGFANAVLQSSLFGLASLFPPKYTQAVMIGQGLAGVIVSLLRIITKASGSD----VKTSAFIYFIIAVLIVILC   76 (309)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CEEEEEEHhhhHHHhccHHHHHhcCCHHHHHHHHhhccHHHHHHHHHHHHHHHhhhc----cchhhhhHHHHHHHHHHHH
Confidence            567888999999999999999999999999999999999999999999999998654    7899999999999999999


Q ss_pred             HHHHHHHcCCChHHHHHHHhhhhcCCCCccchhhhhccc-----Cccchh-hhhHHhhhhccHHHHHHHHHHHHHHHHHH
Q 036062          150 ILLYAFFFPKLPIVKYFRSKAASEGSKTVSADLAAAGIQ-----TKAAQA-EDEAKQYERLSNKQLFIQNFDYALDLFLI  223 (333)
Q Consensus       150 ~~~~~~~l~k~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~v~~~i~~~~~~i~l~  223 (333)
                      +++|. .+.|+|++|+|.+++.+.++++.+++..+++++     .+...+ .+++.++...+++.++||+|+++++++++
T Consensus        77 ~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~i~~~  155 (309)
T PF01733_consen   77 IILYF-ILPRSPFYRYYLEREAKGDERETEEELSSDGEEESESRSEGTFENSKPQEENVFISFWVVLKKIWPYALSIFLV  155 (309)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHH-HhccChHHHHHHhhhcccchhhhhhhhhhhccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            99999 999999999997765211111111111111110     000000 11112223346889999999999999999


Q ss_pred             hhhhceeccceeeeccccccC--CchH-HHHHHHHHHHHHHhhhhhcccccccccCcchHHHHHHHHHHHHHHHHhhhh-
Q 036062          224 YVLTLSIFPGFLYENTGQHRL--GEWY-SLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAK-  299 (333)
Q Consensus       224 f~vTl~vFPgi~~~~~~~~~~--~~w~-~~~~~~~fNlgD~iGR~l~~~~~~~~~~~~~l~~~~~~R~ifiplf~lc~~-  299 (333)
                      |++|+++|||+++.+++.+.+  ++|| |+++|++||+||++||.++++++++.+++|++++++++|++|||+|++||+ 
T Consensus       156 f~vTl~~FP~it~~v~s~~~~~~~~~f~pv~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~  235 (309)
T PF01733_consen  156 FFVTLSVFPGITSAVQSSNNPDWSSYFVPVVLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQ  235 (309)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HhheeeeccceeeeeeccccCCCccHHHHHHHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999998887765332  3456 468999999999999999999888766899999999999999999999975 


Q ss_pred             ---------cCchhHHHHHHHHHhhhcchhhhhhhcccCCCCC
Q 036062          300 ---------YGDQGWMIFLTSFLGLTNGYLTVCVMTVAPKGYK  333 (333)
Q Consensus       300 ---------~~~d~~~~i~~~lfgltNGy~~t~~m~~~P~~~~  333 (333)
                               ++||+|++++|++||+||||++|++||+||++++
T Consensus       236 p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~  278 (309)
T PF01733_consen  236 PRPRYLPVLFNSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVS  278 (309)
T ss_dssp             -------------------------------HHHH--------
T ss_pred             cccccCCCcccchHHHHHHHHHHHHccchhhhceeeeCCCcCC
Confidence                     4689999999999999999999999999999875

Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=99.72  E-value=4.9e-16  Score=150.45  Aligned_cols=284  Identities=15%  Similarity=0.066  Sum_probs=183.7

Q ss_pred             ehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccch
Q 036062            8 LTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGI   87 (333)
Q Consensus         8 ~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~   87 (333)
                      ..++-.+|.++.-+.+.++.+|+|++.|+.....++.+.+++.+.-   .       ..+..++.+++.+.++++-|.++
T Consensus        64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~---~-------~v~~~l~Gv~las~ssg~GE~tf  133 (402)
T PF02487_consen   64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS---P-------SVWVRLLGVVLASLSSGLGEVTF  133 (402)
T ss_pred             HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeec---c-------chhHHHHHHHHHhhhhhhhHHHH
Confidence            5677888999999999999999999999998888876666553221   1       23578899999999999999999


Q ss_pred             hhhcccCChHHHHHHHhhhhhhhHHHHHHHHHHHhhccCCccccchhhhHHhHHHHHHHHHHHHHHHHHcCCChHHHHHH
Q 036062           88 VGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYFR  167 (333)
Q Consensus        88 ~gla~~~p~~~~~a~~~Gqg~aGi~~s~~~ii~~~~~~~~~~~~~~s~~iyF~~a~~~~~~~~~~~~~~l~k~~~~~~~~  167 (333)
                      .++++.+|++-..++.+|+|.||++.++........    +-+++..    +.+...+-++-++.|+ .+.+.|..++- 
T Consensus       134 L~lt~~y~~~~l~~wssGTG~aGl~Ga~~y~~lT~~----g~s~~~t----ll~~~~lp~~~~~~~f-~~L~~~~~~~~-  203 (402)
T PF02487_consen  134 LSLTHFYGKSSLSAWSSGTGGAGLVGALYYLGLTTL----GLSPRTT----LLIMLVLPAIFLLSYF-FLLPSPPTNRP-  203 (402)
T ss_pred             HHHHHhcCccccccccCCcChhhHHHHHHHHHHHHh----CcCHHHH----HHHHHHHHHHHHHHHH-HhhccccccCC-
Confidence            999999999999999999999999999998866542    2223332    2222233333333444 33343321110 


Q ss_pred             HhhhhcCCCCccchhhhhcccCccchhhhhHHhhhhccHHHHHHHHHHHHHHHHHHhhhhceeccceeeeccc-ccc-CC
Q 036062          168 SKAASEGSKTVSADLAAAGIQTKAAQAEDEAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENTG-QHR-LG  245 (333)
Q Consensus       168 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~i~l~f~vTl~vFPgi~~~~~~-~~~-~~  245 (333)
                       .+..+.+.+.++|..++  +.+.+ ++++..+.....-++..|+..++++.++++|+..+.+-+|+...... ... ..
T Consensus       204 -~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~  279 (402)
T PF02487_consen  204 -YQESESEDEAEDDLLES--ETSES-KPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSP  279 (402)
T ss_pred             -CcccCCCCccccccccc--ccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCH
Confidence             00000001111111100  00000 00111111112234566777779999999999999998888633211 111 11


Q ss_pred             chHHHHHHHHHHHHHHhhhhhcccccccccCcchHHHHHHHHHHHHHHHHhhhhc---CchhHHHHHHHHHhhhcchh
Q 036062          246 EWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKY---GDQGWMIFLTSFLGLTNGYL  320 (333)
Q Consensus       246 ~w~~~~~~~~fNlgD~iGR~l~~~~~~~~~~~~~l~~~~~~R~ifiplf~lc~~~---~~d~~~~i~~~lfgltNGy~  320 (333)
                      .-+-+..-++|++|.+++|+...+.+.     |++|+++++.++..-++++-..+   ++.|..+++++.-|+-.|-.
T Consensus       280 r~~Y~~Y~~~YQ~GVFISRSS~~~~ri-----r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~  352 (402)
T PF02487_consen  280 RDQYRWYQLLYQLGVFISRSSLPFFRI-----RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGAS  352 (402)
T ss_pred             HHHHHHHHHHHHHHHhhhhcceeeeeh-----hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHH
Confidence            123456688999999999999877433     67899999999988887776653   46666677788888877743

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]

Probab=99.06  E-value=5.2e-10  Score=103.63  Aligned_cols=278  Identities=14%  Similarity=0.101  Sum_probs=173.4

Q ss_pred             eehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccc
Q 036062            7 ALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGG   86 (333)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s   86 (333)
                      ..-++-++|.++..+...++.+|+++..|+-...........+   +..+.       .-+..|+.+.+..+++|+-+-+
T Consensus        66 ~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~l---Vafs~-------s~~~sL~GV~~aSissGlGEiT  135 (409)
T KOG3880|consen   66 AVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFL---VAFSN-------SVPMSLLGVVFASISSGLGEIT  135 (409)
T ss_pred             hhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEE---EEecc-------chhHHHhhhhhhhhcCCcceee
Confidence            3456778999999999999999999999987655554433333   22221       1235788899999999999999


Q ss_pred             hhhhcccCChHHHHHHHhhhhhhhHHHHHHHHHHHhhccCCccccchhhhHHhHHHHHHHHHHHHHHHHHcCCChHHHHH
Q 036062           87 IVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKYF  166 (333)
Q Consensus        87 ~~gla~~~p~~~~~a~~~Gqg~aGi~~s~~~ii~~~~~~~~~~~~~~s~~iyF~~a~~~~~~~~~~~~~~l~k~~~~~~~  166 (333)
                      +.++++.+|+.-...+.+|+|.||++.+.......-.+   +-+++..-++.-.+.+++    .++|+ .+.|.|...+-
T Consensus       136 FL~lss~Y~~~~i~~WSSGTGgAGliGa~SYa~lT~~~---~~spk~Tlli~l~lP~lf----a~~yf-~lL~~pes~~~  207 (409)
T KOG3880|consen  136 FLALSSRYPSIVIAGWSSGTGGAGLIGASSYAFLTSWA---NLSPKSTLLIMLFLPALF----AFAYF-FLLKSPESVYS  207 (409)
T ss_pred             hhhhhccCCCceeccccCCCCcchhhhhhHHHHHhhhc---CCChhhHHHHHHHHHHHH----HHHHH-heeCCCccccC
Confidence            99999999999999999999999999999887544322   233555555555555443    34566 56666654442


Q ss_pred             HHhhhhcCCCCccchhhhhcccCccchhhh--hHHhhhhccHHHHHHHHHHHHHHHHHHhhhhceeccceeeecc--ccc
Q 036062          167 RSKAASEGSKTVSADLAAAGIQTKAAQAED--EAKQYERLSNKQLFIQNFDYALDLFLIYVLTLSIFPGFLYENT--GQH  242 (333)
Q Consensus       167 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~i~~~~~~i~l~f~vTl~vFPgi~~~~~--~~~  242 (333)
                      ...+ ++.+...+++...+..      |++  .+........+..+|...++++-+++||+-.+.+--|++-...  ..+
T Consensus       208 ptl~-~~~~~~~~~~~~~~a~------e~~sv~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~  280 (409)
T KOG3880|consen  208 PTLQ-PSTEIIPSQYLPFEAA------EEKSVPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSH  280 (409)
T ss_pred             CCcC-ccceeccCCCCccccc------ccccCchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEecccc
Confidence            1100 0000000111000000      011  0001111112222333334778888888877776666542211  011


Q ss_pred             c-----C--CchHHHHHHHHHHHHHHhhhhhcccccccccCcchHHHHHHHHHHHHHHHHhhhh--cC-chhHHHHHHHH
Q 036062          243 R-----L--GEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAK--YG-DQGWMIFLTSF  312 (333)
Q Consensus       243 ~-----~--~~w~~~~~~~~fNlgD~iGR~l~~~~~~~~~~~~~l~~~~~~R~ifiplf~lc~~--~~-~d~~~~i~~~l  312 (333)
                      .     +  -.|+.    ..|++|-|+.|+.-++.+.|     .+|.+.+++++-.-.|++-+.  +. +.|.-+++++.
T Consensus       281 g~sls~~sqYRwyq----vlYQlGVFiSRSS~~~~~~p-----~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~  351 (409)
T KOG3880|consen  281 GFSLSKDSQYRWYQ----VLYQLGVFISRSSINLFTMP-----YLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILF  351 (409)
T ss_pred             CCccchhhcchhhh----eeeeeeEEEEeccceEEech-----HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence            1     1  13665    57999999999999987653     688999999998888888774  34 45545666777


Q ss_pred             Hhhhcc
Q 036062          313 LGLTNG  318 (333)
Q Consensus       313 fgltNG  318 (333)
                      =|+-.|
T Consensus       352 EGLlGG  357 (409)
T KOG3880|consen  352 EGLLGG  357 (409)
T ss_pred             HhhcCc
Confidence            777666

>KOG4255 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.51  E-value=2e-06  Score=80.42  Aligned_cols=155  Identities=18%  Similarity=0.183  Sum_probs=107.1

Q ss_pred             CCCceehhhhhHHHHHHHHHHHh-hhccCC-CccchHHHHHHH-HHHHHHHHHH--hhhc-cCCCCcchHHHHHHHHHHH
Q 036062            3 HPTRALTLVYQPFALGTMAILAY-NESKID-TRKRNITGYIIF-FASTLALLLL--DLAT-SGEGGLGPFLGVCVFVALF   76 (333)
Q Consensus         3 ~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~-~~~Ri~~~l~~~-~~~~~~~~~~--~~~~-~~~~~~~~f~~~l~~v~~~   76 (333)
                      +..+|.++.-|+.|+..+++.+. .+.|.. ...-++.-+... .+.++++++.  |+++ .+..+..   -.+.+.+.+
T Consensus        46 slpsyl~vvVqla~lgpLi~tllhk~~~~~i~~VPiif~ll~~a~v~~l~laflW~~ts~V~g~~hS~---afl~L~F~L  122 (439)
T KOG4255|consen   46 SLPSYLSVVVQLANLGPLIVTLLHKGAPGTIPTVPIIFVLLLLACVCQLGLAFLWHDTSPVFGALHSW---AFLSLLFGL  122 (439)
T ss_pred             ccchHHHHHHHHHcchhHHHHHHHhhCCCcCCCCCchhHHHHHHHHHHHHHHHHHhcchhhhcCcchH---HHHHHHHHH
Confidence            45678899999999988766443 222211 122333333333 4556666666  2222 1222333   345566777


Q ss_pred             hhhhHhhccchhhhcccCChHHHHHHHhhhhhhhHHHHHHHHHHHhhc---c-C----CccccchhhhHHhHHHHHHHHH
Q 036062           77 GVADAHVRGGIVGDLSFMYPEFMQSFFAGLAASGALTSGLRLLTKAAF---E-K----SHDGLRKGVMLFLAICTSFEFV  148 (333)
Q Consensus        77 g~~~~~~q~s~~gla~~~p~~~~~a~~~Gqg~aGi~~s~~~ii~~~~~---~-~----~~~~~~~s~~iyF~~a~~~~~~  148 (333)
                      ++.++...-.++-..+.+||.|.+++..|||++|++++++.++-....   + +    .+-.++.+..+||.+-..+...
T Consensus       123 Aivdc~SnVtFLPFMs~lpp~fL~afFvG~GLSaLlPsllaLaQGtg~~~C~~n~t~~r~fP~rFs~s~FFl~l~~~~~~  202 (439)
T KOG4255|consen  123 AIVDCTSNVTFLPFMSQLPPAFLNAFFVGMGLSALLPSLLALAQGTGRLECDLNGTPGRPFPPRFSVSTFFLALFAFTCA  202 (439)
T ss_pred             HHHHhhccchhhhhhhhCChHHHHHHHHhccHHHHHHHHHHHHccCCceeecCCCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence            788888888999999999999999999999999999999998754321   0 1    1123578999999999999999


Q ss_pred             HHHHHHHHcCCCh
Q 036062          149 CILLYAFFFPKLP  161 (333)
Q Consensus       149 ~~~~~~~~l~k~~  161 (333)
                      |++.|+ .+.|++
T Consensus       203 alaAF~-vL~r~~  214 (439)
T KOG4255|consen  203 ALAAFF-VLYRLG  214 (439)
T ss_pred             HHHHHH-HHHhcC
Confidence            999998 777764

>TIGR00898 2A0119 cation transport protein

Probab=97.68  E-value=0.0084  Score=59.89  Aligned_cols=81  Identities=11%  Similarity=0.021  Sum_probs=43.1

Q ss_pred             hhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchh
Q 036062            9 TLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIV   88 (333)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~   88 (333)
                      ...+.+..++...+.-.+.+|...|.=+..+.++..+..++...   .+       .++..++.-++.|++.+.......
T Consensus       133 ~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~---~~-------~~~~~~~~r~l~G~~~~~~~~~~~  202 (505)
T TIGR00898       133 QSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF---SP-------NYTVFLVFRLLVGMGIGGIWVQAV  202 (505)
T ss_pred             HHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH---cc-------cHHHHHHHHHHHHhhccchHHHHH
Confidence            34455555555566666667765443333343333333333221   11       244556666778888877666666


Q ss_pred             hhccc-CChHHH
Q 036062           89 GDLSF-MYPEFM   99 (333)
Q Consensus        89 gla~~-~p~~~~   99 (333)
                      .+.+. +|++.-
T Consensus       203 ~~~~e~~~~~~r  214 (505)
T TIGR00898       203 VLNTEFLPKKQR  214 (505)
T ss_pred             HHhheecChhhh
Confidence            66554 666543

>TIGR00893 2A0114 d-galactonate transporter

Probab=97.67  E-value=0.0057  Score=57.62  Aligned_cols=100  Identities=13%  Similarity=0.056  Sum_probs=58.5

Q ss_pred             eehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccc
Q 036062            7 ALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGG   86 (333)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s   86 (333)
                      ++..++.++..+...+.-.+.+|...|.-+..+.++..+...+....+          .++..++.-.+.|++.+.....
T Consensus        33 ~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~g~~~~~~~~~  102 (399)
T TIGR00893        33 YVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG----------AYVSLYILRVLLGAAEAPFFPG  102 (399)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHhhhhH
Confidence            344456666666777777778888766555556555544444433322          2344555667778888877777


Q ss_pred             hhhhccc-CChHH----HHHHHhhhhhhhHHHHHH
Q 036062           87 IVGDLSF-MYPEF----MQSFFAGLAASGALTSGL  116 (333)
Q Consensus        87 ~~gla~~-~p~~~----~~a~~~Gqg~aGi~~s~~  116 (333)
                      ...+.+. +|++.    +.....++++++++...+
T Consensus       103 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~  137 (399)
T TIGR00893       103 IILIVASWFPASERATAVSIFNSAQGLGGIIGGPL  137 (399)
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHH
Confidence            7776665 56543    333445555665555443

>TIGR00895 2A0115 benzoate transport

Probab=97.56  E-value=0.0017  Score=61.67  Aligned_cols=93  Identities=14%  Similarity=0.061  Sum_probs=47.9

Q ss_pred             hhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhc
Q 036062           12 YQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDL   91 (333)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla   91 (333)
                      +.+...+...+.-.+.+|...|.-+..+..+..+..++....   .       .+...++...+.|++.+........+.
T Consensus        61 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~  130 (398)
T TIGR00895        61 GLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA---T-------NVTQLLILRFLAGLGLGGLMPNLNALV  130 (398)
T ss_pred             HHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc---c-------chHHHHHHHHHHhcccccchhhHHHHH
Confidence            344444555555666777765544444544443333332221   1       133445566677888777777777766


Q ss_pred             cc-CChHH----HHHHHhhhhhhhHHHH
Q 036062           92 SF-MYPEF----MQSFFAGLAASGALTS  114 (333)
Q Consensus        92 ~~-~p~~~----~~a~~~Gqg~aGi~~s  114 (333)
                      +. +|++.    ......+.++++.+..
T Consensus       131 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~  158 (398)
T TIGR00895       131 SEYAPKRFRGTAVGLMFCGYPIGAAVGG  158 (398)
T ss_pred             HHHcCHHhhchhHhhHhhHHHHHHHHHH
Confidence            65 55443    2233344444444443

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=97.48  E-value=0.0028  Score=59.72  Aligned_cols=96  Identities=9%  Similarity=-0.025  Sum_probs=57.5

Q ss_pred             hhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchh
Q 036062            9 TLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIV   88 (333)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~   88 (333)
                      ...+.+...+.....-.+.+|.+.|.-+..+..+..+..++....+          .++..++.-.+.|++.+.......
T Consensus        36 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~g~~~~~~~~~~~  105 (379)
T TIGR00881        36 LSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST----------SLWVMAALWALNGIFQGMGWPPCG  105 (379)
T ss_pred             HHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh----------hHHHHHHHHHHHHhhccccCCchH
Confidence            3445555556666666777888777666666666555554433332          134455666677888887777777


Q ss_pred             hhccc-CChHH----HHHHHhhhhhhhHHHH
Q 036062           89 GDLSF-MYPEF----MQSFFAGLAASGALTS  114 (333)
Q Consensus        89 gla~~-~p~~~----~~a~~~Gqg~aGi~~s  114 (333)
                      ++.+. +|++.    ......++++++++..
T Consensus       106 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~  136 (379)
T TIGR00881       106 RTVTKWFSRSERGTWVSFWNCSHNVGGGLLP  136 (379)
T ss_pred             HHHHHhcCHhhheeeEeehhccchhHHHHHH
Confidence            66554 55543    2334456666666665

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=97.17  E-value=0.04  Score=51.37  Aligned_cols=97  Identities=16%  Similarity=0.155  Sum_probs=54.9

Q ss_pred             eehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccc
Q 036062            7 ALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGG   86 (333)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s   86 (333)
                      ++..++.++..+.....-.+.+|.+.|.=+..+.++..+...+..+   .+      .. +..++..++.|++.+.....
T Consensus        36 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~---~~------~~-~~~~~~~~l~g~~~~~~~~~  105 (352)
T PF07690_consen   36 LLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF---AS------NF-WLLLIARFLLGIGSGFFSPA  105 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH---HC------CH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh---hh------hH-HHHhhhcccccccccccccc
Confidence            3445566677777777777888876555444455554444222221   11      12 25677777888888888888


Q ss_pred             hhhhccc-CCh-HH---HHHHHhhhhhhhHHH
Q 036062           87 IVGDLSF-MYP-EF---MQSFFAGLAASGALT  113 (333)
Q Consensus        87 ~~gla~~-~p~-~~---~~a~~~Gqg~aGi~~  113 (333)
                      ...+.+. +|+ +.   ......+.+++.++.
T Consensus       106 ~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g  137 (352)
T PF07690_consen  106 SNALIADWFPPEERGRAFGILSAGFSLGSILG  137 (352)
T ss_dssp             HHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccchhhhhhhccccccchhhhhhhcc
Confidence            8776665 665 23   333334444444443

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>TIGR00900 2A0121 H+ Antiporter protein

Probab=97.12  E-value=0.13  Score=48.06  Aligned_cols=102  Identities=16%  Similarity=-0.021  Sum_probs=56.2

Q ss_pred             hhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchh
Q 036062            9 TLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIV   88 (333)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~   88 (333)
                      ..++.++..+.....-.+.+|...|.-+..+.++..+...+....+...     ...++..++...+.|++.+.......
T Consensus        40 ~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~g~~~~~~~~~~~  114 (365)
T TIGR00900        40 ALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLG-----GLNIWQVYVLAGILAIAQAFFTPAYQ  114 (365)
T ss_pred             HHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcC-----CCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344555555555656667777655544445554444444444443211     12345556667778888888888777


Q ss_pred             hhccc-CChHH----HHHHHhhhhhhhHHHHH
Q 036062           89 GDLSF-MYPEF----MQSFFAGLAASGALTSG  115 (333)
Q Consensus        89 gla~~-~p~~~----~~a~~~Gqg~aGi~~s~  115 (333)
                      ++.+. .|++.    ......+.++++++...
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~  146 (365)
T TIGR00900       115 AMLPDLVPEEQLTQANSLSQAVRSLFYIVGPG  146 (365)
T ss_pred             HHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            77766 45432    22334555555555544

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=97.11  E-value=0.065  Score=50.61  Aligned_cols=84  Identities=13%  Similarity=0.042  Sum_probs=46.5

Q ss_pred             ceehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhcc
Q 036062            6 RALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRG   85 (333)
Q Consensus         6 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~   85 (333)
                      +++...+.+...+.....-.+.+|...|.-+..+.++..+..+.....+.         .++..++...+.|++.+....
T Consensus        40 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~---------~~~~~~~~~~~~g~~~~~~~~  110 (366)
T TIGR00886        40 GNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQ---------SYSVLLLLRLFIGIAGGSFAS  110 (366)
T ss_pred             hHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHHHHhchhhHh
Confidence            34455566677777777777888887776666666666555544333320         123344444555655554433


Q ss_pred             chhhhcccCChHH
Q 036062           86 GIVGDLSFMYPEF   98 (333)
Q Consensus        86 s~~gla~~~p~~~   98 (333)
                      ..--++..+|++.
T Consensus       111 ~~~~~~~~~~~~~  123 (366)
T TIGR00886       111 CMPWISFFFPKKI  123 (366)
T ss_pred             HHHHHHHhcCHhh
Confidence            3333344566553

>TIGR00883 2A0106 metabolite-proton symporter

Probab=97.07  E-value=0.05  Score=51.40  Aligned_cols=95  Identities=15%  Similarity=0.035  Sum_probs=47.8

Q ss_pred             HHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhccc-CCh---
Q 036062           21 AILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSF-MYP---   96 (333)
Q Consensus        21 ~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla~~-~p~---   96 (333)
                      .+.-.+.+|...|.-+..+.++..+...+....+...  ..........++.-.+.|++.+........+.+. +|+   
T Consensus        53 ~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r  130 (394)
T TIGR00883        53 IVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYA--TIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKR  130 (394)
T ss_pred             HHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChh--hhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccc
Confidence            3444556777665555555555555444443332211  0001112234445566777777666666665555 443   


Q ss_pred             -HHHHHHHhhhhhhhHHHHHHH
Q 036062           97 -EFMQSFFAGLAASGALTSGLR  117 (333)
Q Consensus        97 -~~~~a~~~Gqg~aGi~~s~~~  117 (333)
                       ++......|.+++.++..++-
T Consensus       131 ~~~~~~~~~~~~~G~~i~~~~~  152 (394)
T TIGR00883       131 GFYGSFQQVGAPVGLLLAALTV  152 (394)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH
Confidence             244555566666666555443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>TIGR00891 2A0112 putative sialic acid transporter

Probab=97.06  E-value=0.18  Score=48.06  Aligned_cols=97  Identities=11%  Similarity=0.076  Sum_probs=52.8

Q ss_pred             hhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchh
Q 036062            9 TLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIV   88 (333)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~   88 (333)
                      ...+.+...+.....-.+.+|...|.-+..+.++..+..+.....+          .+...++.-++.|++.+.......
T Consensus        53 ~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~----------~~~~l~~~~~l~G~~~~~~~~~~~  122 (405)
T TIGR00891        53 ISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAP----------GYITMFIARLVIGIGMGGEYGSSA  122 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc----------cHHHHHHHHHHHHhhhhhhhHHHH
Confidence            3345555566666666677777655544445444433333322211          244456667777887777776666


Q ss_pred             hhcc-cCChHH----HHHHHhhhhhhhHHHHH
Q 036062           89 GDLS-FMYPEF----MQSFFAGLAASGALTSG  115 (333)
Q Consensus        89 gla~-~~p~~~----~~a~~~Gqg~aGi~~s~  115 (333)
                      ++.. .+|++.    ......|.++++++...
T Consensus       123 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  154 (405)
T TIGR00891       123 AYVIESWPKHLRNKASGLLISGYAVGAVVAAQ  154 (405)
T ss_pred             HHHHHhCChhhhhHHHHHHHHHHHHHHHHHHH
Confidence            6544 456553    23344555555555544

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=97.06  E-value=0.088  Score=49.96  Aligned_cols=80  Identities=14%  Similarity=-0.026  Sum_probs=44.0

Q ss_pred             hhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchh
Q 036062            9 TLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIV   88 (333)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~   88 (333)
                      ...+.+...+...+.-.+.+|.+.|.-+..+.++..+..+.....+          .++..++...+.|++.+.......
T Consensus        46 ~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~g~~~~~~~~~~~  115 (385)
T TIGR00710        46 LTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN----------NIETLLVLRFVQAFGASAGSVISQ  115 (385)
T ss_pred             HHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc----------cHHHHHHHHHHHHcchhHHHHHHH
Confidence            3344555556666666677777655444444444444333322221          133445556677877777777777


Q ss_pred             hhccc-CChHH
Q 036062           89 GDLSF-MYPEF   98 (333)
Q Consensus        89 gla~~-~p~~~   98 (333)
                      ++... +|++.
T Consensus       116 ~~~~~~~~~~~  126 (385)
T TIGR00710       116 ALVRDIYPGEE  126 (385)
T ss_pred             HHHHHhcCcHH
Confidence            76665 56443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=97.05  E-value=0.071  Score=53.40  Aligned_cols=96  Identities=14%  Similarity=-0.030  Sum_probs=48.8

Q ss_pred             HHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhccc-CChH-
Q 036062           20 MAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSF-MYPE-   97 (333)
Q Consensus        20 ~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla~~-~p~~-   97 (333)
                      .++.-.+.+|+..|.-+..+.+++.+..++..+.+....  -+...+...++.=++.|++.+....+...+.+. +|++ 
T Consensus        74 ~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~--~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~  151 (490)
T PRK10642         74 GLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYAT--IGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK  151 (490)
T ss_pred             HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHH--HHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC
Confidence            344445677776666566666666655555444332110  001111234455566777777666666665554 5643 


Q ss_pred             ---HHHHHHhhhhhhhHHHHHHH
Q 036062           98 ---FMQSFFAGLAASGALTSGLR  117 (333)
Q Consensus        98 ---~~~a~~~Gqg~aGi~~s~~~  117 (333)
                         +...+..|..++.++...+.
T Consensus       152 Rg~~~~~~~~~~~~G~~lg~~~~  174 (490)
T PRK10642        152 RGFMGSWLDFGSIAGFVLGAGVV  174 (490)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHH
Confidence               34444455555555544433

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=97.03  E-value=0.13  Score=51.74  Aligned_cols=151  Identities=13%  Similarity=0.092  Sum_probs=76.3

Q ss_pred             eehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccc
Q 036062            7 ALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGG   86 (333)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s   86 (333)
                      ++...+.+...+...+.-.+.+|+..|.=+..+.++..+..++.....   .. .....+...++.-++.|++.+.....
T Consensus        60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~---~~-~~~~~~~~~~~~r~l~G~~~g~~~~~  135 (502)
T TIGR00887        60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSP---GS-SPKSVMATLCFWRFWLGVGIGGDYPL  135 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcc---Cc-ccchHHHHHHHHHHHHHHHHhhhhHH
Confidence            344555566666667777777777555444445555444433322221   11 01122455666777788888877666


Q ss_pred             hhhhcc-cCChHHHHHH----HhhhhhhhHHHHHHHHHHHhhccC-----Ccc---------ccchhhhHHhHHHHHHHH
Q 036062           87 IVGDLS-FMYPEFMQSF----FAGLAASGALTSGLRLLTKAAFEK-----SHD---------GLRKGVMLFLAICTSFEF  147 (333)
Q Consensus        87 ~~gla~-~~p~~~~~a~----~~Gqg~aGi~~s~~~ii~~~~~~~-----~~~---------~~~~s~~iyF~~a~~~~~  147 (333)
                      ...+.+ .+|++.-...    ..++.+++++...+..+......+     ++.         ....+-...|.++++..+
T Consensus       136 ~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~  215 (502)
T TIGR00887       136 SAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPAL  215 (502)
T ss_pred             HHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHH
Confidence            666666 4676653332    233444444444433322211111     000         011234455566666555


Q ss_pred             HHHHHHHHHcCCChH
Q 036062          148 VCILLYAFFFPKLPI  162 (333)
Q Consensus       148 ~~~~~~~~~l~k~~~  162 (333)
                      +.++... .++-+|.
T Consensus       216 i~~~~~~-~lpESpr  229 (502)
T TIGR00887       216 LALYFRL-TIPETPR  229 (502)
T ss_pred             HHHHHHH-hCCCCHH
Confidence            5555555 6777775

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK11663 regulatory protein UhpC; Provisional

Probab=97.02  E-value=0.13  Score=50.65  Aligned_cols=97  Identities=7%  Similarity=-0.092  Sum_probs=47.6

Q ss_pred             hhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchh
Q 036062            9 TLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIV   88 (333)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~   88 (333)
                      ...+.++..+.....-.+.+|...|.=+..+.++..+.+++....+          .++..++.-++.|++.+.......
T Consensus        64 ~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----------~~~~l~~~~~l~g~~~g~~~~~~~  133 (434)
T PRK11663         64 ATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSS----------SLWAFALLWVLNAFFQGWGWPVCA  133 (434)
T ss_pred             HHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHh----------HHHHHHHHHHHHHHHHHccchHHH
Confidence            3445555556666666677777665433334444433333322221          122233333445666655545445


Q ss_pred             hh-cccCChHH----HHHHHhhhhhhhHHHHH
Q 036062           89 GD-LSFMYPEF----MQSFFAGLAASGALTSG  115 (333)
Q Consensus        89 gl-a~~~p~~~----~~a~~~Gqg~aGi~~s~  115 (333)
                      .+ +..+|++.    +..+..++++++++...
T Consensus       134 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~  165 (434)
T PRK11663        134 KLLTAWYSRTERGGWWAIWNTAHNVGGALIPL  165 (434)
T ss_pred             HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44 34467654    23334566666665543

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=96.87  E-value=0.18  Score=48.54  Aligned_cols=97  Identities=19%  Similarity=0.096  Sum_probs=52.1

Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhh
Q 036062           10 LVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVG   89 (333)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~g   89 (333)
                      ..+.+...+.....-.+.+|...|.-+..+..+..+..+.....   .       .+...++.-.+.|++.+.......+
T Consensus        57 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~l~G~~~~~~~~~~~~  126 (406)
T PRK11551         57 SAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA---W-------DFPSLLVARLLTGVGLGGALPNLIA  126 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh---c-------cHHHHHHHHHHHHhhHHHHHHHHHH
Confidence            34455555566666777788776655555554443333322221   1       2344556667778877766655555


Q ss_pred             hcc-cCChHHH----HHHHhhhhhhhHHHHHH
Q 036062           90 DLS-FMYPEFM----QSFFAGLAASGALTSGL  116 (333)
Q Consensus        90 la~-~~p~~~~----~a~~~Gqg~aGi~~s~~  116 (333)
                      +.+ .+|++.-    .....|..+++.+...+
T Consensus       127 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~  158 (406)
T PRK11551        127 LTSEAVGPRLRGTAVSLMYCGVPFGGALASVI  158 (406)
T ss_pred             HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            544 4665432    22345555666655443

>PRK03699 putative transporter; Provisional

Probab=96.68  E-value=0.11  Score=50.12  Aligned_cols=72  Identities=13%  Similarity=0.164  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHHhhhhhcccccccccCcchHHHHHHHHHHHHHHHHhhhhcCchhHHHHHHHHHhhhcchhhhhhh
Q 036062          251 VLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVM  325 (333)
Q Consensus       251 ~~~~~fNlgD~iGR~l~~~~~~~~~~~~~l~~~~~~R~ifiplf~lc~~~~~d~~~~i~~~lfgltNGy~~t~~m  325 (333)
                      ....++.++..+||.+..+..-+..++|.+........+.+.++..+   ++..+..+..+++|+.+|-.-+..+
T Consensus       245 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~G~~~~~~~~~~~  316 (394)
T PRK03699        245 NLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNT---DDPSHLLYAILGLGFFSSAIYTTII  316 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHc---CCchHHHHHHHHHHHHHHHHHHHHH
Confidence            34567788889999887774333323344443444444433333222   3445555567778886654444333

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=96.59  E-value=0.16  Score=49.20  Aligned_cols=103  Identities=9%  Similarity=0.021  Sum_probs=55.5

Q ss_pred             ehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccch
Q 036062            8 LTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGI   87 (333)
Q Consensus         8 ~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~   87 (333)
                      +...+.+...+...+.-.+.+|...|.-+..+..+..+..++....+.       ...++..++.-.+.|++.+......
T Consensus        76 ~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~r~l~G~~~~~~~~~~  148 (481)
T TIGR00879        76 VVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAF-------ALSVEMLIVGRVLLGIGVGIASALV  148 (481)
T ss_pred             HHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc-------ccchHHHHHHHHHHHhhhhHHHhHH
Confidence            344455555566666666677766554444444444443333322221       1223456667777888888777766


Q ss_pred             hhhccc-CChHHH----HHHHhhhhhhhHHHHHHH
Q 036062           88 VGDLSF-MYPEFM----QSFFAGLAASGALTSGLR  117 (333)
Q Consensus        88 ~gla~~-~p~~~~----~a~~~Gqg~aGi~~s~~~  117 (333)
                      ..+.+. +|++.-    ..+..+.++++++..++.
T Consensus       149 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~  183 (481)
T TIGR00879       149 PMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG  183 (481)
T ss_pred             HHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence            665544 565542    233345555555555544

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK03545 putative arabinose transporter; Provisional

Probab=96.59  E-value=0.28  Score=47.25  Aligned_cols=95  Identities=18%  Similarity=0.021  Sum_probs=53.7

Q ss_pred             hhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhc
Q 036062           12 YQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDL   91 (333)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla   91 (333)
                      +.+...+.....-.+.+|.+.|.-+..+..+..+.++.....+          .++..++.-.+.|.+.+.......++.
T Consensus        53 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----------~~~~l~~~r~~~G~~~~~~~~~~~~~i  122 (390)
T PRK03545         53 YAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW----------NFTVLLISRIGIAFAHAIFWSITASLA  122 (390)
T ss_pred             HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc----------cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444444455677888877666666665555444433221          133445555667777777766666665


Q ss_pred             cc-CChH----HHHHHHhhhhhhhHHHHHH
Q 036062           92 SF-MYPE----FMQSFFAGLAASGALTSGL  116 (333)
Q Consensus        92 ~~-~p~~----~~~a~~~Gqg~aGi~~s~~  116 (333)
                      +. .|++    .+..+..|.+++.++...+
T Consensus       123 ~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l  152 (390)
T PRK03545        123 IRVAPAGKKAQALSLLATGTALAMVLGLPL  152 (390)
T ss_pred             HHhCChhhhhhHHHHHHHHHHHHHHHHhhH
Confidence            54 5643    4444566666666665443

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=96.56  E-value=0.53  Score=46.49  Aligned_cols=93  Identities=13%  Similarity=-0.017  Sum_probs=47.2

Q ss_pred             hhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhh-h
Q 036062           12 YQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVG-D   90 (333)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~g-l   90 (333)
                      +.++..+...+.-.+.+|+..|.=+..+.++..+..+.+.+.+...      ..+...++.-.+.|++.+........ +
T Consensus        72 ~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~------~~~~~~~~~~~l~gi~~g~~~~~~~~~~  145 (452)
T PRK11273         72 ISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWAT------SSIAVMFVLLFLCGWFQGMGWPPCGRTM  145 (452)
T ss_pred             HHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhccc------ccHHHHHHHHHHHHHHHhccchHHHHHH
Confidence            4444455555666677777666544445555444444444332111      12334445555667666665543333 3


Q ss_pred             cccCChHHHHH----HHhhhhhhh
Q 036062           91 LSFMYPEFMQS----FFAGLAASG  110 (333)
Q Consensus        91 a~~~p~~~~~a----~~~Gqg~aG  110 (333)
                      +..+|++..+-    +..|.+++|
T Consensus       146 ~~~~~~~~r~~~~~~~~~~~~~g~  169 (452)
T PRK11273        146 VHWWSQKERGGIVSVWNCAHNVGG  169 (452)
T ss_pred             HHhCChHHHHHHHHHHHHHHHhhh
Confidence            44577664332    345555554

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=96.47  E-value=0.39  Score=47.06  Aligned_cols=99  Identities=4%  Similarity=-0.148  Sum_probs=61.0

Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhh
Q 036062           10 LVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVG   89 (333)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~g   89 (333)
                      ..+.+...+.....-.+.+|...|.-+..++.+..+...++......       ..|+..++..++.|++.+..|.+.-.
T Consensus        45 s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~-------~~~~~~l~~~~l~G~g~g~~~~~~~~  117 (410)
T TIGR00885        45 SAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI-------MNYTLFLVGLFILTAGLGFLETAANP  117 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh-------ccHHHHHHHHHHHHhhHHHHHhhhhH
Confidence            34445555566667778899988887888888776655543322211       23556677778889999999987666


Q ss_pred             hccc-CChHH----HHHHHhhhhhhhHHHHH
Q 036062           90 DLSF-MYPEF----MQSFFAGLAASGALTSG  115 (333)
Q Consensus        90 la~~-~p~~~----~~a~~~Gqg~aGi~~s~  115 (333)
                      +... .|+++    ++....++++++.+...
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~  148 (410)
T TIGR00885       118 YILVMGPESTATRRLNLAQSFNPFGSIIGMV  148 (410)
T ss_pred             HHHHHCCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            5543 34433    33333455555555544

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=96.44  E-value=0.18  Score=55.59  Aligned_cols=99  Identities=13%  Similarity=-0.051  Sum_probs=55.4

Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhh
Q 036062           11 VYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGD   90 (333)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gl   90 (333)
                      ++.++.+++..+.=.+..|+..|.-+..+..+.++..++........       .++..++..++.|++.++......++
T Consensus        55 ~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~  127 (1146)
T PRK08633         55 LFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLG-------WFWLAFAVTFLLGAQSAIYSPAKYGI  127 (1146)
T ss_pred             HHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHc-------cHHHHHHHHHHHHHHHHhhchHHHhh
Confidence            34444555555555566777666544545544433333333332211       25566677778899999888888777


Q ss_pred             ccc-CChH----HHHHHHhhhhhhhHHHHHH
Q 036062           91 LSF-MYPE----FMQSFFAGLAASGALTSGL  116 (333)
Q Consensus        91 a~~-~p~~----~~~a~~~Gqg~aGi~~s~~  116 (333)
                      .+. +|++    .+..+..+.+++.++..++
T Consensus       128 i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l  158 (1146)
T PRK08633        128 IPELVGKENLSRANGLLEAFTIVAILAGTAL  158 (1146)
T ss_pred             hHHhcCcccchhhhhHHHHHHHHHHHHHHHH
Confidence            666 4533    3344445555555555443

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=96.43  E-value=0.5  Score=47.18  Aligned_cols=21  Identities=24%  Similarity=0.157  Sum_probs=15.9

Q ss_pred             HHHHHHHHHHHHhhhhhcccc
Q 036062          250 LVLIASYNVWDLIARYIPLVK  270 (333)
Q Consensus       250 ~~~~~~fNlgD~iGR~l~~~~  270 (333)
                      -.....++++..+||.+.++.
T Consensus       291 ~~~~~~~~~~~~ig~~~~G~l  311 (476)
T PLN00028        291 GAIAASFGLMNLFARPAGGYL  311 (476)
T ss_pred             HHHHHHHHHHHHHHHhhhHHH
Confidence            345677888999999877763

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=96.40  E-value=0.3  Score=48.49  Aligned_cols=75  Identities=15%  Similarity=0.085  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHHHhhhhhccccccc-ccCcchHHHHHHHHHHHHHHHHhhhhcCchhHHHHHHHHHhhhcchhhhhh
Q 036062          250 LVLIASYNVWDLIARYIPLVKCVK-LESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCV  324 (333)
Q Consensus       250 ~~~~~~fNlgD~iGR~l~~~~~~~-~~~~~~l~~~~~~R~ifiplf~lc~~~~~d~~~~i~~~lfgltNGy~~t~~  324 (333)
                      -....++.+++.++|.+..+...+ ..+++.......+-+.....++++...++.++.++..+++|+.+|-.....
T Consensus       279 g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~  354 (455)
T TIGR00892       279 AFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALL  354 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHH
Confidence            345667889999988776653211 112222222222233333333344333455556667889999888665443

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=96.33  E-value=0.29  Score=48.56  Aligned_cols=104  Identities=12%  Similarity=-0.021  Sum_probs=56.4

Q ss_pred             ehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccch
Q 036062            8 LTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGI   87 (333)
Q Consensus         8 ~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~   87 (333)
                      +..++.++..+.+...-.+.+|.+.|.-+..++++..+.+..+.......     ...+...++.-++.|++.+..-...
T Consensus        69 ~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~  143 (467)
T PRK09556         69 IGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSG-----SVSLGLMIALWALSGFFQSTGGPCS  143 (467)
T ss_pred             HHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcc-----cchHHHHHHHHHHHHHHHhccchHH
Confidence            34445566666666666777888777666666666544444444332211     1124455555566777766555555


Q ss_pred             hhhcc-cCChH----HHHHHHhhhhhhhHHHHHH
Q 036062           88 VGDLS-FMYPE----FMQSFFAGLAASGALTSGL  116 (333)
Q Consensus        88 ~gla~-~~p~~----~~~a~~~Gqg~aGi~~s~~  116 (333)
                      ..+.+ .+|++    .+..+..|.++++++..++
T Consensus       144 ~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i  177 (467)
T PRK09556        144 YSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGV  177 (467)
T ss_pred             HHHHHHHcCccceeeeEEeeecccchhhhHHHHH
Confidence            45444 46654    2333445556666665444

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=96.22  E-value=0.33  Score=45.48  Aligned_cols=92  Identities=10%  Similarity=0.014  Sum_probs=48.4

Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhh
Q 036062           11 VYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGD   90 (333)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gl   90 (333)
                      ++.+...+.....-.+.+|...|.-+..+.++..+..+.....+          .++..++.-.+.|.+.+.........
T Consensus        46 ~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~g~~~~~~~~~~~~~  115 (377)
T TIGR00890        46 LLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIAD----------SLAALYLTYGLASAGVGIAYGIALNT  115 (377)
T ss_pred             HHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHH----------HHHHHHHHHHHHhHHHHHHHHhHHHH
Confidence            44555555556656667777766555556655554444433332          12334444457777777665555554


Q ss_pred             ccc-CChH---HHHHHHhhhhhhhHH
Q 036062           91 LSF-MYPE---FMQSFFAGLAASGAL  112 (333)
Q Consensus        91 a~~-~p~~---~~~a~~~Gqg~aGi~  112 (333)
                      ... +|++   .+.....|.++++++
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~g~~~  141 (377)
T TIGR00890       116 AVKWFPDKRGLASGIIIGGYGLGSFI  141 (377)
T ss_pred             HHHHcCcccHHHHHHHHHhcchhHhH
Confidence            443 4433   334444555555543

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=96.19  E-value=0.66  Score=45.57  Aligned_cols=100  Identities=11%  Similarity=-0.046  Sum_probs=48.4

Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchh-
Q 036062           10 LVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIV-   88 (333)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~-   88 (333)
                      ..+.+...+.....-.+.+|+..|.-+..+.++..+........+..      ...+....+..++.|++.+...+... 
T Consensus        68 ~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~~l~g~~~g~~~~~~~~  141 (438)
T TIGR00712        68 SAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWA------TSSIAIMFVLLFLNGWFQGMGWPPCGR  141 (438)
T ss_pred             HHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccc------cchHHHHHHHHHHHHHHhhcchHHHHH
Confidence            34444555555555566777775544444554544444433332211      11233344445556666655444322 


Q ss_pred             hhcccCChHH----HHHHHhhhhhhhHHHHH
Q 036062           89 GDLSFMYPEF----MQSFFAGLAASGALTSG  115 (333)
Q Consensus        89 gla~~~p~~~----~~a~~~Gqg~aGi~~s~  115 (333)
                      .++..+|++.    ++....+.+++|.+...
T Consensus       142 ~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~  172 (438)
T TIGR00712       142 TMVHWWSQSERGTIVSIWNCAHNIGGGIPPL  172 (438)
T ss_pred             HHHHhcCcccchhHHHHHHHHHHhHhHHHHH
Confidence            2334577543    33344566666666543

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=96.14  E-value=0.46  Score=47.89  Aligned_cols=143  Identities=13%  Similarity=0.064  Sum_probs=68.7

Q ss_pred             ehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccch
Q 036062            8 LTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGI   87 (333)
Q Consensus         8 ~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~   87 (333)
                      ...++-+..+++..+...+.+|...|.-+..+.++.....+.....-..       ..+-..++.=.+.|+.+++..+..
T Consensus        65 ~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~-------~~~e~li~GR~i~Gl~~gl~~~~~  137 (485)
T KOG0569|consen   65 IVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSA-------PSFEMLILGRLIVGLACGLSTGLV  137 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHHHHhHHHHHHH
Confidence            3445666666777777777777666643333333322222221111111       123345555566677777666655


Q ss_pred             hhhcccCChHHHHHHH-hhhhhhhHHHHHHH-HHHH-hhccCCccccchhhhHHhHHHHHHHHHHHHHHHHHcCCChHH
Q 036062           88 VGDLSFMYPEFMQSFF-AGLAASGALTSGLR-LLTK-AAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIV  163 (333)
Q Consensus        88 ~gla~~~p~~~~~a~~-~Gqg~aGi~~s~~~-ii~~-~~~~~~~~~~~~s~~iyF~~a~~~~~~~~~~~~~~l~k~~~~  163 (333)
                      -=+-+...|+...+.+ .=..++..++.++- .+.. -..++     +..--.-++...+..++.++... +++.+|.+
T Consensus       138 pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt-----~~~W~~l~~~~~i~~~~~l~~l~-~~PESPk~  210 (485)
T KOG0569|consen  138 PMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGT-----EDLWPYLLAFPLIPALLQLALLP-FLPESPKY  210 (485)
T ss_pred             HHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCC-----CcchHHHHHHHHHHHHHHHHHHh-cCCCCcch
Confidence            5555555565555333 22333333333322 1111 11111     12222334555555566666666 78888864

>TIGR00899 2A0120 sugar efflux transporter

Probab=96.05  E-value=0.72  Score=43.52  Aligned_cols=23  Identities=17%  Similarity=0.065  Sum_probs=13.3

Q ss_pred             hhHHHHHHHHHhhhcchhhhhhh
Q 036062          303 QGWMIFLTSFLGLTNGYLTVCVM  325 (333)
Q Consensus       303 d~~~~i~~~lfgltNGy~~t~~m  325 (333)
                      .+...+...+.|+..|......+
T Consensus       288 ~~~~~~~~~~~g~~~g~~~~~~~  310 (375)
T TIGR00899       288 LWALLMLQLLNAIFIGILAGIGM  310 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            33344456677777776554444

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK10489 enterobactin exporter EntS; Provisional

Probab=95.98  E-value=1.4  Score=42.65  Aligned_cols=101  Identities=7%  Similarity=-0.025  Sum_probs=50.8

Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhh
Q 036062           10 LVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVG   89 (333)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~g   89 (333)
                      ..+.++..+...+.-.+.+|.+.|.-+..+..+..+....+.......     ...++..++...+.|++.+.......+
T Consensus        59 ~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~g~~~~~~~~~~~~  133 (417)
T PRK10489         59 TLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLP-----EPSLLAIYLLGLWDGFFGSLGVTALLA  133 (417)
T ss_pred             HHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcC-----CCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            344555555566666677787766655555554433333322221111     112344555666667777766555555


Q ss_pred             hcc-cCChHHHH----HHHhhhhhhhHHHHH
Q 036062           90 DLS-FMYPEFMQ----SFFAGLAASGALTSG  115 (333)
Q Consensus        90 la~-~~p~~~~~----a~~~Gqg~aGi~~s~  115 (333)
                      +.. ..|++..+    ....+.++++++...
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~  164 (417)
T PRK10489        134 ATPALVGRENLMQAGAITMLTVRLGSVISPA  164 (417)
T ss_pred             hhhhccCHHHHHHHHHHHHHHHhHHHHhHHH
Confidence            444 45655432    222344455444433

>PRK09952 shikimate transporter; Provisional

Probab=95.95  E-value=0.74  Score=45.35  Aligned_cols=92  Identities=14%  Similarity=0.035  Sum_probs=46.1

Q ss_pred             HHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhccc-CChHH---
Q 036062           23 LAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSF-MYPEF---   98 (333)
Q Consensus        23 ~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla~~-~p~~~---   98 (333)
                      .-.+.+|...|.-+..+..+..+.+++..+.+....  .+...+...++.=.+.|++.+....+...+.+. +|++.   
T Consensus        84 ~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~  161 (438)
T PRK09952         84 FGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFST--IGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAF  161 (438)
T ss_pred             HHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcH
Confidence            344566766555555555555555554444332110  001112234444556677666554444444444 66543   


Q ss_pred             -HHHHHhhhhhhhHHHHHH
Q 036062           99 -MQSFFAGLAASGALTSGL  116 (333)
Q Consensus        99 -~~a~~~Gqg~aGi~~s~~  116 (333)
                       ......|.+++.++...+
T Consensus       162 ~~~~~~~g~~~G~~l~~~~  180 (438)
T PRK09952        162 YSSGVQVGYGVGLLLSTGL  180 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence             555667777776666543

>TIGR01272 gluP glucose/galactose transporter

Probab=95.92  E-value=0.32  Score=45.85  Aligned_cols=86  Identities=6%  Similarity=-0.068  Sum_probs=51.5

Q ss_pred             chHHHHHHHHHHHhhhhHhhccchhhhcccC-Ch----HHHHHHHhhhhhhhHHHHHHHHHHHhhccC---Ccc------
Q 036062           64 GPFLGVCVFVALFGVADAHVRGGIVGDLSFM-YP----EFMQSFFAGLAASGALTSGLRLLTKAAFEK---SHD------  129 (333)
Q Consensus        64 ~~f~~~l~~v~~~g~~~~~~q~s~~gla~~~-p~----~~~~a~~~Gqg~aGi~~s~~~ii~~~~~~~---~~~------  129 (333)
                      ..|...++..++.|.+.+++|.+.=.+.+.. |+    +.++-...-+|++.++.-+   +.......   +.+      
T Consensus         8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~---i~~~~i~~~~~~~~~~~~~~   84 (310)
T TIGR01272         8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPL---FGGSLILSGAGDLSMQVATA   84 (310)
T ss_pred             hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHH---HHHHHHhcCCcchhhhhhhh
Confidence            3588899999999999999999999999876 43    2334444444555544433   33322210   000      


Q ss_pred             --ccchhhhHHhHHHHHHHHHHHHH
Q 036062          130 --GLRKGVMLFLAICTSFEFVCILL  152 (333)
Q Consensus       130 --~~~~s~~iyF~~a~~~~~~~~~~  152 (333)
                        +...-...|+.++.+..++.++.
T Consensus        85 ~~~~~~~~~~yl~ia~~~~~~~i~~  109 (310)
T TIGR01272        85 NAEAAKVHTPYLLLAGALAVLAIIF  109 (310)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              01123455777777766666533

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=95.81  E-value=1.5  Score=41.63  Aligned_cols=96  Identities=13%  Similarity=-0.001  Sum_probs=47.8

Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhh
Q 036062           10 LVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVG   89 (333)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~g   89 (333)
                      .++.++..+...+.-.+.+|...|.-+..+.++..+........+          .++..++...+.|++.+.......+
T Consensus        33 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~----------~~~~~~~~~~l~g~~~~~~~~~~~~  102 (377)
T PRK11102         33 SAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ----------TIDQLIYMRFLHGLAAAAASVVINA  102 (377)
T ss_pred             HHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc----------cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345555556666666677777655444445554444444433221          1233444556667766665554444


Q ss_pred             hcc-cCChHHH----HHHHhhhhhhhHHHHH
Q 036062           90 DLS-FMYPEFM----QSFFAGLAASGALTSG  115 (333)
Q Consensus        90 la~-~~p~~~~----~a~~~Gqg~aGi~~s~  115 (333)
                      +.. .+|++..    .....+.++++++...
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  133 (377)
T PRK11102        103 LMRDMFPKEEFSRMMSFVTLVMTIAPLLAPI  133 (377)
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444 3564432    2223444555555443

>PRK12382 putative transporter; Provisional

Probab=95.75  E-value=0.87  Score=43.68  Aligned_cols=67  Identities=6%  Similarity=-0.033  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHhhhhhcccccccccCcchHHHHHHHHHHHHHHHHhhhhcCchhHHHHHHHHHhhhcchhh
Q 036062          252 LIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLT  321 (333)
Q Consensus       252 ~~~~fNlgD~iGR~l~~~~~~~~~~~~~l~~~~~~R~ifiplf~lc~~~~~d~~~~i~~~lfgltNGy~~  321 (333)
                      ....+.++..+|+...++...+..++|.+......-.+-..++.   ..++.++..+..+++|+..|-..
T Consensus       254 ~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~g~~~~~~~  320 (392)
T PRK12382        254 TLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLW---LAPTAWVALAGAALTGAGCSLIF  320 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH---HcccHHHHHHHHHHHHHHHHhHH
Confidence            34567788888887766532222233444333333332222211   12344444556778888877443

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=95.69  E-value=2.2  Score=41.38  Aligned_cols=94  Identities=13%  Similarity=0.047  Sum_probs=46.7

Q ss_pred             hhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhc
Q 036062           12 YQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDL   91 (333)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla   91 (333)
                      +.+...+...+.-.+.+|+..|.=+..+.++..+..+.....   +       .++..++.-.+.|++.+.......++.
T Consensus        64 ~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~---~-------~~~~l~~~r~l~G~~~g~~~~~~~~~i  133 (394)
T PRK10213         64 TAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA---N-------SFSLLLIGRACLGLALGGFWAMSASLT  133 (394)
T ss_pred             HHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH---C-------hHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            344444444555556677766544444555554433332221   1       234445555677777776666666555


Q ss_pred             c-cCChHH----HHHHHhhhhhhhHHHHH
Q 036062           92 S-FMYPEF----MQSFFAGLAASGALTSG  115 (333)
Q Consensus        92 ~-~~p~~~----~~a~~~Gqg~aGi~~s~  115 (333)
                      + .+|++.    ..-+..+.+++.++...
T Consensus       134 ~~~~~~~~~~~a~~~~~~~~~~g~~ig~~  162 (394)
T PRK10213        134 MRLVPPRTVPKALSVIFGAVSIALVIAAP  162 (394)
T ss_pred             HHHcCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            4 466442    22234445555444433

>PRK10091 MFS transport protein AraJ; Provisional

Probab=95.43  E-value=2.1  Score=41.02  Aligned_cols=98  Identities=13%  Similarity=0.103  Sum_probs=51.2

Q ss_pred             eehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccc
Q 036062            7 ALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGG   86 (333)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s   86 (333)
                      +...++.+...+...+.-.+.+|.+.|.-+..+..+..+..+....   .+       .++..++.-++.|++.+.....
T Consensus        42 ~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~---~~-------~~~~l~~~r~l~G~~~~~~~~~  111 (382)
T PRK10091         42 HMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL---SS-------SYLMLAIGRLVSGFPHGAFFGV  111 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH---hC-------cHHHHHHHHHHHHhhhHHHHHH
Confidence            3445556666677777777778887655555555554433333222   11       1233444556677766655444


Q ss_pred             hhhhcc-cCChHH----HHHHHhhhhhhhHHHH
Q 036062           87 IVGDLS-FMYPEF----MQSFFAGLAASGALTS  114 (333)
Q Consensus        87 ~~gla~-~~p~~~----~~a~~~Gqg~aGi~~s  114 (333)
                      ...+.+ .+|++.    +..+..|+++++.+..
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~  144 (382)
T PRK10091        112 GAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGI  144 (382)
T ss_pred             HHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhc
Confidence            333333 355543    2333456666666543

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=95.41  E-value=1.7  Score=46.23  Aligned_cols=146  Identities=9%  Similarity=-0.030  Sum_probs=76.4

Q ss_pred             eehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccc
Q 036062            7 ALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGG   86 (333)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s   86 (333)
                      ++..++.+..++..++.-.+..|+..|.-++.++++..+..++..+.+          .++..++.-++.|++.+.....
T Consensus       206 ~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~----------s~~~llv~R~l~G~g~g~~~p~  275 (742)
T TIGR01299       206 MLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQ----------GYGFFLFCRLLSGFGIGGAIPI  275 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh----------hHHHHHHHHHHHHHHHHHHHHH
Confidence            344455666666667767777887777666666555444443332221          1334555566677777666666


Q ss_pred             hhhhccc-CChHHHH----HHHhhhhhhhHHHHHHHHHHHhhccC---Cccc-cchhhhHHhHHHHHHHHHHHHHHHHHc
Q 036062           87 IVGDLSF-MYPEFMQ----SFFAGLAASGALTSGLRLLTKAAFEK---SHDG-LRKGVMLFLAICTSFEFVCILLYAFFF  157 (333)
Q Consensus        87 ~~gla~~-~p~~~~~----a~~~Gqg~aGi~~s~~~ii~~~~~~~---~~~~-~~~s~~iyF~~a~~~~~~~~~~~~~~l  157 (333)
                      .+.+.+. +|++.-+    .+..+.++++++...+........+-   .+.. ...+-...|.+..+..+++++.++ .+
T Consensus       276 ~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~-~l  354 (742)
T TIGR01299       276 VFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALT-FM  354 (742)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHH-Hc
Confidence            6666664 5655433    33345555555554433221111100   0000 011223345555556666666666 78


Q ss_pred             CCChHH
Q 036062          158 PKLPIV  163 (333)
Q Consensus       158 ~k~~~~  163 (333)
                      +.+|..
T Consensus       355 PESPrw  360 (742)
T TIGR01299       355 PESPRF  360 (742)
T ss_pred             CCCHHH
Confidence            888764

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=95.38  E-value=1.7  Score=39.89  Aligned_cols=76  Identities=12%  Similarity=0.106  Sum_probs=43.2

Q ss_pred             hhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchh
Q 036062            9 TLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIV   88 (333)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~   88 (333)
                      ...+.++..+.....-.+.+|.+.|.-+..+.++..+..+.....+          .++...+...+.|++.+..+....
T Consensus        40 ~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~g~~~~~~~~~~~  109 (352)
T cd06174          40 VSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFAS----------SLWLLLVGRFLLGLGGGALYPAAA  109 (352)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhc----------cHHHHHHHHHHHHcccccccHhHH
Confidence            3344555555556666667777666544455555444444433321          134455566677777777777777


Q ss_pred             hhcccC
Q 036062           89 GDLSFM   94 (333)
Q Consensus        89 gla~~~   94 (333)
                      .+....
T Consensus       110 ~~~~~~  115 (352)
T cd06174         110 ALIAEW  115 (352)
T ss_pred             HHHHHh
Confidence            766654

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>TIGR00901 2A0125 AmpG-related permease

Probab=95.36  E-value=2.5  Score=39.81  Aligned_cols=48  Identities=17%  Similarity=0.023  Sum_probs=24.8

Q ss_pred             HHHHHHhhhhHhhccchhhhccc-CChH----HHHHHHhhhhhhhHHHHHHHH
Q 036062           71 VFVALFGVADAHVRGGIVGDLSF-MYPE----FMQSFFAGLAASGALTSGLRL  118 (333)
Q Consensus        71 ~~v~~~g~~~~~~q~s~~gla~~-~p~~----~~~a~~~Gqg~aGi~~s~~~i  118 (333)
                      ....+.+.+.+..+-..-++... +|+|    .......|.+++.++...+-.
T Consensus        88 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~  140 (356)
T TIGR00901        88 GLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLAL  140 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHH
Confidence            33344455566555555555544 5533    223345566666666555443

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=95.35  E-value=3.1  Score=40.84  Aligned_cols=68  Identities=6%  Similarity=0.022  Sum_probs=50.8

Q ss_pred             HHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhcccCChH
Q 036062           23 LAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPE   97 (333)
Q Consensus        23 ~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla~~~p~~   97 (333)
                      .-.+.+|+++|.-++.|+.++.+.+.++.  +-+.     ...|...+...+++|.+-+++|.+.=.+.+.+.++
T Consensus        68 a~~~~kk~gyk~gi~lgL~l~avg~~lF~--pAa~-----~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~  135 (422)
T COG0738          68 AGLLIKKLGYKAGIVLGLLLYAVGAALFW--PAAS-----SKSYGFFLVALFILASGIGLLETAANPYVTLLGKP  135 (422)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHh--hhhh-----hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCc
Confidence            45577899999999999999877666632  1111     23456677777889999999999998888887654

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=95.04  E-value=2.3  Score=41.77  Aligned_cols=83  Identities=13%  Similarity=0.089  Sum_probs=48.8

Q ss_pred             ceehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhcc
Q 036062            6 RALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRG   85 (333)
Q Consensus         6 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~   85 (333)
                      .+....+.++..+...+.-.+.+|...|.-+..+.++..+..++..   ..+       .+...++.-++.|++.+....
T Consensus        40 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~---~~~-------~~~~l~~~~~~~G~~~~~~~~  109 (485)
T TIGR00711        40 QWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCG---VAP-------NLELMIIFRVIQGFGGGPLIP  109 (485)
T ss_pred             hHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHh---CcC-------CHHHHHHHHHHHHhhhhhHHH
Confidence            3455667777777777777778887665544445554443333322   111       234455666777888777776


Q ss_pred             chhhhccc-CChHH
Q 036062           86 GIVGDLSF-MYPEF   98 (333)
Q Consensus        86 s~~gla~~-~p~~~   98 (333)
                      ....+... +|++.
T Consensus       110 ~~~~~i~~~~~~~~  123 (485)
T TIGR00711       110 LSFSTLLNIYPPEK  123 (485)
T ss_pred             HHHHHHHHHCCHHH
Confidence            66666554 56554

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=94.99  E-value=2.2  Score=40.95  Aligned_cols=88  Identities=14%  Similarity=0.008  Sum_probs=49.5

Q ss_pred             hhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchh
Q 036062            9 TLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIV   88 (333)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~   88 (333)
                      ..++.++..+++...-.+.+|...|.-+..+..+..+..+.......... . ....+...++.-++.|++.+.......
T Consensus        57 ~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~l~~~r~l~G~~~~~~~~~~~  134 (399)
T PRK05122         57 ISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAA-W-PVLSLLLLLLGRLLLGIGESLAGTGSI  134 (399)
T ss_pred             HHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhc-c-chhHHHHHHHHHHHHHhhHHhhcchHH
Confidence            34455556666666667778887777666676665444433333322210 0 112344455566778888887776665


Q ss_pred             hh-cccCChHH
Q 036062           89 GD-LSFMYPEF   98 (333)
Q Consensus        89 gl-a~~~p~~~   98 (333)
                      .. ....|++.
T Consensus       135 ~~~~~~~~~~~  145 (399)
T PRK05122        135 LWGIGRVGALH  145 (399)
T ss_pred             HHHHhhcChhh
Confidence            54 45566443

>PRK10133 L-fucose transporter; Provisional

Probab=94.87  E-value=3.8  Score=40.45  Aligned_cols=100  Identities=7%  Similarity=-0.109  Sum_probs=60.7

Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhh
Q 036062           10 LVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVG   89 (333)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~g   89 (333)
                      ..+.+...+.....-.+.+|+..|.=+..++.+..+..++......+       ..|...++.-++.|++.+..+.....
T Consensus        68 ~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a-------~~~~~ll~~r~l~G~g~g~~~~~~~~  140 (438)
T PRK10133         68 SAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEI-------MNYTLFLVGLFIIAAGLGCLETAANP  140 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc-------CCHHHHHHHHHHHHHHHHHHHhhHHH
Confidence            34455555566666677788777766666666665555442211111       23556777788889999988888888


Q ss_pred             hcccCChHHHH-----HHHhhhhhhhHHHHHH
Q 036062           90 DLSFMYPEFMQ-----SFFAGLAASGALTSGL  116 (333)
Q Consensus        90 la~~~p~~~~~-----a~~~Gqg~aGi~~s~~  116 (333)
                      +....+++...     ....+.++++.+..++
T Consensus       141 ~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~  172 (438)
T PRK10133        141 FVTVLGPESSGHFRLNLAQTFNSFGAIIAVVF  172 (438)
T ss_pred             HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            77666654443     3345555555555544

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=94.81  E-value=2.6  Score=41.49  Aligned_cols=94  Identities=11%  Similarity=0.023  Sum_probs=52.4

Q ss_pred             ehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhh--hccCCCCcchHHHHHHHHHHHhhhhHhhcc
Q 036062            8 LTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDL--ATSGEGGLGPFLGVCVFVALFGVADAHVRG   85 (333)
Q Consensus         8 ~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~   85 (333)
                      ..-.+.+...++.++.-.+.+|+..|.=+..+.+++.+..+.......  .....+....+...++.=++.|++.+....
T Consensus        60 ~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~  139 (479)
T PRK10077         60 CVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASM  139 (479)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhh
Confidence            344556666667777777888876666555555554444433322111  000001122334455666778888888888


Q ss_pred             chhhhccc-CChHHHHH
Q 036062           86 GIVGDLSF-MYPEFMQS  101 (333)
Q Consensus        86 s~~gla~~-~p~~~~~a  101 (333)
                      ...++.+. +|++.-..
T Consensus       140 ~~~~~i~e~~~~~~rg~  156 (479)
T PRK10077        140 LSPMYIAEIAPAHIRGK  156 (479)
T ss_pred             HHHHHHHhhCChhhhhH
Confidence            77777555 66554333

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=94.65  E-value=3.3  Score=42.26  Aligned_cols=85  Identities=14%  Similarity=0.027  Sum_probs=57.7

Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhh
Q 036062           10 LVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVG   89 (333)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~g   89 (333)
                      .+..+|.++..+..=.+..|.+.|.=++.+-++..+..++++.+....     ....+..++..++.|+++++...+..+
T Consensus        52 ~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~-----~~~~~~Ll~~~fl~g~~~a~~~PA~~A  126 (524)
T PF05977_consen   52 AASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFG-----LLSPWLLLILTFLLGIGSAFFNPAWQA  126 (524)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhC-----cCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344667777766666678888777766667666665555555554322     233456777888899999999888888


Q ss_pred             hccc-CChHHH
Q 036062           90 DLSF-MYPEFM   99 (333)
Q Consensus        90 la~~-~p~~~~   99 (333)
                      +... .|++..
T Consensus       127 ~ip~lV~~~~L  137 (524)
T PF05977_consen  127 IIPELVPKEDL  137 (524)
T ss_pred             HHHHhccHhhH
Confidence            8764 675543

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=94.63  E-value=2.7  Score=41.47  Aligned_cols=98  Identities=10%  Similarity=-0.078  Sum_probs=50.7

Q ss_pred             hhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchh
Q 036062            9 TLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIV   88 (333)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~   88 (333)
                      ..++.++..+.....-.+.+|...|.-+..+.++..+..++......        ..++..++.-++.|++.+.......
T Consensus        82 ~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~r~~~G~~~~~~~~~~~  153 (465)
T TIGR00894        82 LSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG--------GGIALVVFCRVIQGLAQGSVSPATH  153 (465)
T ss_pred             HHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH--------cCchHHHHHHHHHHHhcccchhhHH
Confidence            34455555566666666777776665455555544443333222211        1123345555667777777666666


Q ss_pred             hhccc-CChHHHH----HHHhhhhhhhHHHH
Q 036062           89 GDLSF-MYPEFMQ----SFFAGLAASGALTS  114 (333)
Q Consensus        89 gla~~-~p~~~~~----a~~~Gqg~aGi~~s  114 (333)
                      .+.+. +|++...    ....|..+++++..
T Consensus       154 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~  184 (465)
T TIGR00894       154 KIIVKWAPPKERSRLLGMSTSGFQLGTFIFL  184 (465)
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            65554 6655433    33344444444443

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=94.34  E-value=5.1  Score=38.34  Aligned_cols=78  Identities=15%  Similarity=0.016  Sum_probs=39.2

Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhh
Q 036062           11 VYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGD   90 (333)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gl   90 (333)
                      .+.++..+...+.-.+.+|...|.-+..+.++..+......   ..+       .+...++.-.+.|++.+..+....++
T Consensus        46 ~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~---~~~-------~~~~~~~~~~l~g~~~~~~~~~~~~~  115 (392)
T PRK10473         46 VYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS---LAE-------TSSLFLAGRFLQGIGAGCCYVVAFAI  115 (392)
T ss_pred             HHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH---HhC-------cHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence            34445555555566667777655434444444333332221   111       12223344556677777777666666


Q ss_pred             ccc-CChHH
Q 036062           91 LSF-MYPEF   98 (333)
Q Consensus        91 a~~-~p~~~   98 (333)
                      ... +|++.
T Consensus       116 i~~~~~~~~  124 (392)
T PRK10473        116 LRDTLDDRR  124 (392)
T ss_pred             HHHHcCHHH
Confidence            554 56443

>TIGR00896 CynX cyanate transporter

Probab=94.33  E-value=4.7  Score=37.96  Aligned_cols=94  Identities=13%  Similarity=0.031  Sum_probs=46.9

Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhh
Q 036062           11 VYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGD   90 (333)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gl   90 (333)
                      .+.+...+.....-++.+|...|.-+..+.+...+..+.   . ..+       .++..++.-.+.|++.+..+...-.+
T Consensus        43 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~---~-~~~-------~~~~l~~~~~~~g~g~~~~~~~~~~~  111 (355)
T TIGR00896        43 LPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILI---R-SAP-------GTALLFAGTALIGVGIAIINVLLPSL  111 (355)
T ss_pred             HHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHH---H-Hhc-------cHHHHHHHHHHHHHHHHHHhccchHH
Confidence            344555555566667778877766555555443332222   1 111       12233455556666666655554444


Q ss_pred             cccC-ChH---HHHHHHhhhhhhhHHHHH
Q 036062           91 LSFM-YPE---FMQSFFAGLAASGALTSG  115 (333)
Q Consensus        91 a~~~-p~~---~~~a~~~Gqg~aGi~~s~  115 (333)
                      .... |++   .++.+..++++++.+...
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~g~~i~~~  140 (355)
T TIGR00896       112 IKRDFPQRVGLMTGLYSMALMGGAALAAA  140 (355)
T ss_pred             HHHhCcchhhHHHHHHHHHHHHHHHHHHH
Confidence            4443 332   334444555555555443

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=94.17  E-value=0.36  Score=48.87  Aligned_cols=202  Identities=14%  Similarity=0.129  Sum_probs=103.2

Q ss_pred             CCCceehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHh
Q 036062            3 HPTRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAH   82 (333)
Q Consensus         3 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~   82 (333)
                      |.-+++..++.++-.+++.....+.+|++. .|   ++..+.++..++.++....      ..|...+++=++.|.+.+.
T Consensus        81 ~~l~~~~t~F~v~Yii~~~p~~~L~~r~~l-s~---~l~~~~~~w~~~~~~~~~~------~s~~~~ialr~llGl~es~  150 (495)
T KOG2533|consen   81 NQLGVLDTVFYVGYIIGQFPSGLLGDRFPL-SK---GLSVSGILWGLFGFLTAAV------HSFPGLIALRFLLGLFESG  150 (495)
T ss_pred             hhhhhHHHHHHHHHHHHHhhHHHHHHhCCh-HH---HHHHHHHHHHHHHHHHHHH------hhhHHHHHHHHHHHHHhcc
Confidence            444566677777777888888888899882 22   2222222222333222211      1244566667777777766


Q ss_pred             hccchhhhcccC-ChH----HHHHHHhhhhhhhHHHHHHHHHHHhhccCCccccchh-hhHHhHHHHHHHHHHHHHHHHH
Q 036062           83 VRGGIVGDLSFM-YPE----FMQSFFAGLAASGALTSGLRLLTKAAFEKSHDGLRKG-VMLFLAICTSFEFVCILLYAFF  156 (333)
Q Consensus        83 ~q~s~~gla~~~-p~~----~~~a~~~Gqg~aGi~~s~~~ii~~~~~~~~~~~~~~s-~~iyF~~a~~~~~~~~~~~~~~  156 (333)
                      .-.+...+.|.+ .++    -+..+.+.++++++++++++=...-.-   +.....+ ...|...+++..+..+++|+ +
T Consensus       151 ~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~---~~~~~~gW~~~FiI~G~i~~~~gi~~f~-~  226 (495)
T KOG2533|consen  151 GWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLN---GSGGLAGWRWLFIIEGVITLVLGIVVFF-F  226 (495)
T ss_pred             cchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhc---CCCCcCCceeehhHHHHHHHHHHheEEE-E
Confidence            666666666664 433    233444566666666666554321111   1111222 23344556666666888888 8


Q ss_pred             cCCChHHHHHHHhhhhcCCCCccchhhhhcccCccchhhhhHHhhhhccHHHHHH--HHHHHHHHHHHHhhhhc
Q 036062          157 FPKLPIVKYFRSKAASEGSKTVSADLAAAGIQTKAAQAEDEAKQYERLSNKQLFI--QNFDYALDLFLIYVLTL  228 (333)
Q Consensus       157 l~k~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~i~~~~~~i~l~f~vTl  228 (333)
                      ++..|.--...+++    |++...    ++.+.++.. +.+++ .++..+++.+|  ++|+.+++-++...+..
T Consensus       227 lp~~P~~~~fl~~~----ek~~~~----~~~~~~~~~-~~~~~-~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~  290 (495)
T KOG2533|consen  227 LPDNPSKAWFLTDE----EKELVV----ERLRESPSG-GIENK-FKWKGFKEALKDPGVWPFSLCYFFLKLVNY  290 (495)
T ss_pred             ecCChhhccccchH----HHHHHH----HHHHhccCC-Ccccc-cCHHHHHHHHhchhHHHHHHHHHHHhhccc
Confidence            99988622221111    111000    000000000 01111 34445666665  77888888777766665

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=94.16  E-value=0.63  Score=46.51  Aligned_cols=33  Identities=18%  Similarity=0.257  Sum_probs=21.6

Q ss_pred             HHHHHHHHhhhhHhhccchhhhcccCChHHHHH
Q 036062           69 VCVFVALFGVADAHVRGGIVGDLSFMYPEFMQS  101 (333)
Q Consensus        69 ~l~~v~~~g~~~~~~q~s~~gla~~~p~~~~~a  101 (333)
                      ..+...+.+.+.+..++..+++...+++++...
T Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~  383 (476)
T PLN00028        351 AIVVMILFSIFVQAACGATFGIVPFVSRRSLGV  383 (476)
T ss_pred             HHHHHHHHHHHHHHhhhhhcccCcccChhhchh
Confidence            334445556666667777888888888775543

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=93.96  E-value=7.6  Score=43.12  Aligned_cols=53  Identities=13%  Similarity=-0.100  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHHhhhhHhhccchhhhccc-CChH----HHHHHHhhhhhhhHHHHHHHH
Q 036062           66 FLGVCVFVALFGVADAHVRGGIVGDLSF-MYPE----FMQSFFAGLAASGALTSGLRL  118 (333)
Q Consensus        66 f~~~l~~v~~~g~~~~~~q~s~~gla~~-~p~~----~~~a~~~Gqg~aGi~~s~~~i  118 (333)
                      ++..++..++.|++++.......++... +|++    -++.++.+.+++.++..++--
T Consensus       108 ~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g  165 (1140)
T PRK06814        108 VPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGG  165 (1140)
T ss_pred             HHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHH
Confidence            4556777888899999888877777654 5543    344555777777776655443

>TIGR00805 oat sodium-independent organic anion transporter

Probab=93.93  E-value=3  Score=43.53  Aligned_cols=110  Identities=13%  Similarity=-0.013  Sum_probs=66.5

Q ss_pred             ceehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhc----------------------c-----
Q 036062            6 RALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLAT----------------------S-----   58 (333)
Q Consensus         6 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~----------------------~-----   58 (333)
                      .++...|.+++++..+...+++.|.+.+.=+..+.+++.+..++++.-..-.                      .     
T Consensus        71 G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~  150 (633)
T TIGR00805        71 GLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLT  150 (633)
T ss_pred             eeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCC
Confidence            4567788999999999999999997655555557666666665544432000                      0     


Q ss_pred             ------------CCCC--cchHHHHHHHHHHHhhhhHhhccchhhhccc-CC----hHHHHHHHhhhhhhhHHHHH
Q 036062           59 ------------GEGG--LGPFLGVCVFVALFGVADAHVRGGIVGDLSF-MY----PEFMQSFFAGLAASGALTSG  115 (333)
Q Consensus        59 ------------~~~~--~~~f~~~l~~v~~~g~~~~~~q~s~~gla~~-~p----~~~~~a~~~Gqg~aGi~~s~  115 (333)
                                  ....  ...+...++.-++.|++.+........+... +|    +++.+.+.++..++..+..+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~l  226 (633)
T TIGR00805       151 QALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYL  226 (633)
T ss_pred             CCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHH
Confidence                        0000  1135556667778888877766666666555 44    33555555555555555543

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=93.69  E-value=1.8  Score=44.01  Aligned_cols=74  Identities=19%  Similarity=0.107  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHHhhhhhccccccccc-CcchHHHHHHHHHHHHHHHHhhhhcCchhHHHHHHHHHhhhcchhhhhhh
Q 036062          250 LVLIASYNVWDLIARYIPLVKCVKLE-SRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVM  325 (333)
Q Consensus       250 ~~~~~~fNlgD~iGR~l~~~~~~~~~-~~~~l~~~~~~R~ifiplf~lc~~~~~d~~~~i~~~lfgltNGy~~t~~m  325 (333)
                      -.+.-+-++.|.+||.+..+...+.+ +++++...++....+-.+  ++...++-+..+...++||+.-|+..++.-
T Consensus       336 a~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~--~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~  410 (509)
T KOG2504|consen  336 AFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARL--FLPFATTYVGLIVFSILFGFCVGSFSSLTP  410 (509)
T ss_pred             HHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHH--HHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34567789999999999988543322 345555555554443332  221123334556668899999998877653

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=93.36  E-value=8.1  Score=37.36  Aligned_cols=51  Identities=14%  Similarity=0.076  Sum_probs=27.4

Q ss_pred             HHHHHHHHHHHhhhhHhhccchhhhcccC--ChH----HHHHHHhhhhhhhHHHHHH
Q 036062           66 FLGVCVFVALFGVADAHVRGGIVGDLSFM--YPE----FMQSFFAGLAASGALTSGL  116 (333)
Q Consensus        66 f~~~l~~v~~~g~~~~~~q~s~~gla~~~--p~~----~~~a~~~Gqg~aGi~~s~~  116 (333)
                      ++..++...+.+.+.+..+....++.+..  +++    ....-+.+..+++++.+.+
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~  155 (437)
T TIGR00792        99 LVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVI  155 (437)
T ss_pred             HHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444455556777777777777776654  222    2222234555566655543

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=93.24  E-value=4.8  Score=39.20  Aligned_cols=94  Identities=15%  Similarity=0.044  Sum_probs=46.8

Q ss_pred             hHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhh-c
Q 036062           13 QPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGD-L   91 (333)
Q Consensus        13 ~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gl-a   91 (333)
                      .+...+..+..-.+.+|+..|.=+..++++..+........+          .+....+.-.+.|++.+....+...+ +
T Consensus        53 ~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~----------~~~~l~~~r~l~G~~~~~~~~~~~~~~~  122 (412)
T TIGR02332        53 YAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFAT----------GPESLYLLRILVGIAEAGFLPGILLYLT  122 (412)
T ss_pred             HHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc----------CHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence            333334444444556666555433444444433333322221          12233444556677776665555554 4


Q ss_pred             ccCChHH----HHHHHhhhhhhhHHHHHH
Q 036062           92 SFMYPEF----MQSFFAGLAASGALTSGL  116 (333)
Q Consensus        92 ~~~p~~~----~~a~~~Gqg~aGi~~s~~  116 (333)
                      ..+|++.    +..+..|.++++++...+
T Consensus       123 ~~~~~~~rg~~~~~~~~~~~~g~~~~~~~  151 (412)
T TIGR02332       123 FWFPAYFRARANALFMIAMPVTMALGLIL  151 (412)
T ss_pred             HHcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4578643    444556666666665544

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK12307 putative sialic acid transporter; Provisional

Probab=93.05  E-value=8.9  Score=36.98  Aligned_cols=95  Identities=7%  Similarity=-0.071  Sum_probs=53.2

Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhh
Q 036062           10 LVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVG   89 (333)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~g   89 (333)
                      ..+.++..+.....-.+.+|...|.=+..+.++..+...+....+          .++..++.-++.|++.+........
T Consensus        60 ~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~----------~~~~l~~~r~l~G~g~g~~~~~~~~  129 (426)
T PRK12307         60 TAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLAS----------GVIMLTLSRFIVGMGMAGEYACAST  129 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh----------HHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            345555566666666677787666555556655555444433322          1334455556777776655555555


Q ss_pred             h-cccCChHH----HHHHHhhhhhhhHHHH
Q 036062           90 D-LSFMYPEF----MQSFFAGLAASGALTS  114 (333)
Q Consensus        90 l-a~~~p~~~----~~a~~~Gqg~aGi~~s  114 (333)
                      + +..+|++.    +.....|.++++++..
T Consensus       130 ~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~  159 (426)
T PRK12307        130 YAVESWPKHLKSKASAFLVSGFGIGNIIAA  159 (426)
T ss_pred             HHHHhCCHhHhhHhhhHHHHHHhHHHHHHH
Confidence            4 34466553    3345566677666654

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=92.90  E-value=9.3  Score=36.75  Aligned_cols=78  Identities=15%  Similarity=0.124  Sum_probs=39.1

Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhh
Q 036062           11 VYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGD   90 (333)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gl   90 (333)
                      .+.++..+...+.-.+.+|...|.-+..+..+..+..+.....+          .++..++.-.+.|++.+......++.
T Consensus        56 ~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~----------~~~~l~~~~~l~G~~~~~~~~~~~~~  125 (406)
T PRK15402         56 AYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ----------SIEQFTLLRFLQGIGLCFIGAVGYAA  125 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc----------cHHHHHHHHHHHHhHhhhHHHHHHHH
Confidence            45555555555566677787666544445544443333322211          12334445556666666555444444


Q ss_pred             cc-cCChHH
Q 036062           91 LS-FMYPEF   98 (333)
Q Consensus        91 a~-~~p~~~   98 (333)
                      .. .+|++.
T Consensus       126 i~~~~~~~~  134 (406)
T PRK15402        126 IQESFEEAD  134 (406)
T ss_pred             HHHHhChhH
Confidence            33 456543

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=92.67  E-value=10  Score=36.59  Aligned_cols=93  Identities=13%  Similarity=-0.013  Sum_probs=44.0

Q ss_pred             HHHHHHHhhhccCC-----CccchH-HHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhc
Q 036062           18 GTMAILAYNESKID-----TRKRNI-TGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDL   91 (333)
Q Consensus        18 ~~~~~~~~~~~~~~-----~~~Ri~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla   91 (333)
                      +...+.-.+.+|.+     .|.|.+ .+.++..+.+..+...+..       ..++...+..++.+...+......-+++
T Consensus        47 ~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~al~  119 (402)
T PRK11902         47 IFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPH-------AALWPLAGLAVLVAFLSASQDIVFDAYS  119 (402)
T ss_pred             HHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCcc-------chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444445566663     333433 3344444444444333211       1122223333334555554444444444


Q ss_pred             cc-CChH----HHHHHHhhhhhhhHHHHHHH
Q 036062           92 SF-MYPE----FMQSFFAGLAASGALTSGLR  117 (333)
Q Consensus        92 ~~-~p~~----~~~a~~~Gqg~aGi~~s~~~  117 (333)
                      .. .|+|    +....+.|++++.++...+-
T Consensus       120 ~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~  150 (402)
T PRK11902        120 TDVLHPEERGAGAAVKVLGYRLAMLVSGGLA  150 (402)
T ss_pred             HHhcChhhhhHHHHHHHHHHHHHHHHHhHHH
Confidence            43 5544    55556778888877776544

>PRK15011 sugar efflux transporter B; Provisional

Probab=92.59  E-value=8.9  Score=36.89  Aligned_cols=16  Identities=6%  Similarity=-0.078  Sum_probs=9.8

Q ss_pred             HHHHHHHHhhhhhccc
Q 036062          254 ASYNVWDLIARYIPLV  269 (333)
Q Consensus       254 ~~fNlgD~iGR~l~~~  269 (333)
                      ....++..+|+.+.++
T Consensus       259 ~~~~~~~i~~~~~~G~  274 (393)
T PRK15011        259 GTAAGLEIPTMLIAGY  274 (393)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            4445666777766655

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=92.54  E-value=10  Score=36.28  Aligned_cols=36  Identities=14%  Similarity=0.078  Sum_probs=19.1

Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHH
Q 036062           10 LVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFA   45 (333)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~   45 (333)
                      ..+.++..+...+.-.+.+|.+.|.-+..+.....+
T Consensus        50 ~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~   85 (394)
T PRK11652         50 AAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL   85 (394)
T ss_pred             HHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence            344555555555555666777654444444444433

>PRK11043 putative transporter; Provisional

Probab=92.41  E-value=11  Score=36.23  Aligned_cols=34  Identities=6%  Similarity=0.013  Sum_probs=18.3

Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccchHHHHHHHH
Q 036062           11 VYQPFALGTMAILAYNESKIDTRKRNITGYIIFF   44 (333)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~   44 (333)
                      .+.++..+.....-.+.+|...|.-+..+..+..
T Consensus        49 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~   82 (401)
T PRK11043         49 LFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFA   82 (401)
T ss_pred             HHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHH
Confidence            3444445555555666677766554444444433

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=92.37  E-value=3.6  Score=39.45  Aligned_cols=71  Identities=11%  Similarity=0.082  Sum_probs=35.8

Q ss_pred             HHHHHHHHHhhhhhcccccccccCcchHHHHHH-HHHHHHHHHHhhhhcCchhHHHHHHHHHhhhcchhhhhhhcc
Q 036062          253 IASYNVWDLIARYIPLVKCVKLESRKGLMITIL-CRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVMTV  327 (333)
Q Consensus       253 ~~~fNlgD~iGR~l~~~~~~~~~~~~~l~~~~~-~R~ifiplf~lc~~~~~d~~~~i~~~lfgltNGy~~t~~m~~  327 (333)
                      ..+-.++..+++.+.++..-+. +++....... .-.+.   +++....++.++.++.++++|++.|......+.+
T Consensus       246 ~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~  317 (382)
T PRK11128        246 WSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVVR---WGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRY  317 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHH---HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3355567777766655432222 3333322222 11111   1111122455556667889999988776666554

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=91.82  E-value=12  Score=35.63  Aligned_cols=69  Identities=16%  Similarity=0.056  Sum_probs=32.2

Q ss_pred             HHHHHHHHHHHhhhhhcccccccccCcchHHHHHHHHHHHHHHHHhhhhcCchhHHHHHHHHHhhhcchhhh
Q 036062          251 VLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTV  322 (333)
Q Consensus       251 ~~~~~fNlgD~iGR~l~~~~~~~~~~~~~l~~~~~~R~ifiplf~lc~~~~~d~~~~i~~~lfgltNGy~~t  322 (333)
                      .....+.++..+++...++..-+. ++|.+.....+  +....++.....++.+...+..+++|+.+|-...
T Consensus       262 ~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  330 (408)
T PRK09874        262 MIASVPGVAALLSAPRLGKLGDRI-GPEKILITALI--FSVLLLIPMSFVQTPLQLGILRFLLGAADGALLP  330 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHH--HHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHH
Confidence            345566778888776555422222 23333222211  1111111111123444445567778888775443

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=90.98  E-value=2  Score=42.21  Aligned_cols=82  Identities=16%  Similarity=0.167  Sum_probs=59.1

Q ss_pred             HHHHHHh---hhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhccc-C
Q 036062           19 TMAILAY---NESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSF-M   94 (333)
Q Consensus        19 ~~~~~~~---~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla~~-~   94 (333)
                      -++.|..   +.+|+.++.-++.|+++++..++++++.+.          |....+.=.+-|+++|...-+-+++.+. |
T Consensus       119 qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s----------y~~l~vAR~LQgvgsA~~~tsglamlAd~f  188 (464)
T KOG3764|consen  119 QLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS----------YPMLFVARSLQGVGSAFADTSGLAMLADVF  188 (464)
T ss_pred             HHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch----------hHHHHHHHHHhhhhHHHHHhhhHHHHHHHc
Confidence            3344444   446788899999999999999999877763          3346666677899999888888887665 8


Q ss_pred             ChHHHHHHHhhhhhhh
Q 036062           95 YPEFMQSFFAGLAASG  110 (333)
Q Consensus        95 p~~~~~a~~~Gqg~aG  110 (333)
                      |++.-.+-..|.+.++
T Consensus       189 ~~d~er~~vmGialgf  204 (464)
T KOG3764|consen  189 PEDNERGSVMGIALGF  204 (464)
T ss_pred             ccchhhhHHHHHHHHH
Confidence            8777655555555544

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=90.81  E-value=18  Score=35.85  Aligned_cols=66  Identities=23%  Similarity=0.155  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHHHhhhhceeccc---eeeeccccccCCchHHHHHHHHHHHHHHhhhhhccccccccc-Ccch
Q 036062          211 IQNFDYALDLFLIYVLTLSIFPG---FLYENTGQHRLGEWYSLVLIASYNVWDLIARYIPLVKCVKLE-SRKG  279 (333)
Q Consensus       211 ~~i~~~~~~i~l~f~vTl~vFPg---i~~~~~~~~~~~~w~~~~~~~~fNlgD~iGR~l~~~~~~~~~-~~~~  279 (333)
                      |-+|..+++-+++|+|=..+--.   ...+.+..   +.-..-..+.+|-++-+.|-.+++|...+.. .+|.
T Consensus       252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~---s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~  321 (448)
T COG2271         252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGF---SLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG  321 (448)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCC---CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc
Confidence            46788888888898887744211   01111111   1112456689999999999999999544433 3443

>PRK09848 glucuronide transporter; Provisional

Probab=90.12  E-value=12  Score=36.79  Aligned_cols=69  Identities=7%  Similarity=0.025  Sum_probs=35.6

Q ss_pred             HHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhcccC
Q 036062           18 GTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFM   94 (333)
Q Consensus        18 ~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla~~~   94 (333)
                      +...+..++.+|.+.+.-+..+.++..+..+.+...+        ...++...+...+.|++.+..+....++.+..
T Consensus       279 ~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~--------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~  347 (448)
T PRK09848        279 ASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVS--------VWSLPVALVALAIASIGQGVTMTVMWALEADT  347 (448)
T ss_pred             HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC--------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3344555677777766555666655444433332211        01122333444556666666666666665543

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=90.10  E-value=15  Score=35.12  Aligned_cols=70  Identities=10%  Similarity=0.012  Sum_probs=39.1

Q ss_pred             HHHHHHHHHhhhhhcccccccccCcchHHHH----HHHHHHHHHHHHhhhhcCchhHHHHHHHHHhhhcchhhhhhhccc
Q 036062          253 IASYNVWDLIARYIPLVKCVKLESRKGLMIT----ILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVMTVA  328 (333)
Q Consensus       253 ~~~fNlgD~iGR~l~~~~~~~~~~~~~l~~~----~~~R~ifiplf~lc~~~~~d~~~~i~~~lfgltNGy~~t~~m~~~  328 (333)
                      +....++..++..+.....-+ .++|.++..    ..+|.+..+      ..++.+..++.+.+.|++-|-+...+|.+.
T Consensus       246 ~~~~~~~~i~~~~~~~~l~~r-~g~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i  318 (382)
T TIGR00902       246 WGIGVLAEIIIFAFSNKLFQN-CSARDLLLISAIACVGRWAIIG------AIEAFPLIFLLQILHCGTFAVCHLAAMRYI  318 (382)
T ss_pred             HHHHHHHHHHHHHHhHHHHhh-CCHHHHHHHHHHHHHHHHHHHH------hHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            445666666666655442111 133433322    223433321      124455567779999999998888877665


Q ss_pred             C
Q 036062          329 P  329 (333)
Q Consensus       329 P  329 (333)
                      .
T Consensus       319 ~  319 (382)
T TIGR00902       319 A  319 (382)
T ss_pred             H
Confidence            4

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=89.45  E-value=23  Score=34.85  Aligned_cols=251  Identities=16%  Similarity=0.137  Sum_probs=124.3

Q ss_pred             hhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhc
Q 036062           12 YQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDL   91 (333)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla   91 (333)
                      |-..-.+...+...+..|++.|.-....+.++++.-++   ...+       ..|...++.=++.|++.+..-+-..+++
T Consensus        57 yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l---~alA-------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a  126 (394)
T COG2814          57 YALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLL---SALA-------PSFAVLLLARALAGLAHGVFWSIAAALA  126 (394)
T ss_pred             HHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH---HHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44444455566777788886665444444444333333   2222       2477888888899999998888888888


Q ss_pred             ccC-ChH----HHHHHHhhhhhhhHHHHHH-HHHHHhhccCCccccchhhhHHhHHHHHHHHHHHHHHHHHcCCChHHHH
Q 036062           92 SFM-YPE----FMQSFFAGLAASGALTSGL-RLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAFFFPKLPIVKY  165 (333)
Q Consensus        92 ~~~-p~~----~~~a~~~Gqg~aGi~~s~~-~ii~~~~~~~~~~~~~~s~~iyF~~a~~~~~~~~~~~~~~l~k~~~~~~  165 (333)
                      +.+ ||+    -+.-++.|..+|=++..-+ +.+-+..         .=...|+.++.+-++..+..+. .+++      
T Consensus       127 ~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~---------GWR~~F~~ia~l~ll~~~~~~~-~lP~------  190 (394)
T COG2814         127 ARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF---------GWRATFLAIAVLALLALLLLWK-LLPP------  190 (394)
T ss_pred             HHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh---------hHHHHHHHHHHHHHHHHHHHHH-hCCC------
Confidence            875 443    3344455555555444222 2222221         1122366666666666665555 4541      


Q ss_pred             HHHhhhhcCCCCccchhhhhcccCccchhhhhHHhhhhccHHHHH--HHHHHHHHHHHHHhhhhceeccceeeecccccc
Q 036062          166 FRSKAASEGSKTVSADLAAAGIQTKAAQAEDEAKQYERLSNKQLF--IQNFDYALDLFLIYVLTLSIFPGFLYENTGQHR  243 (333)
Q Consensus       166 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~i~~~~~~i~l~f~vTl~vFPgi~~~~~~~~~  243 (333)
                         ++ .++++.              .         +..+..+++  +++|...+..++.+.=.+..|.=+..-.++...
T Consensus       191 ---~~-~~~~~~--------------~---------~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g  243 (394)
T COG2814         191 ---SE-ISGSLP--------------G---------PLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAG  243 (394)
T ss_pred             ---cc-CCCCCC--------------c---------chhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccC
Confidence               00 000000              0         000111222  245555555555555555444222111111111


Q ss_pred             CCchHHHHHHHHHHHHHHhhhhhcccccccccCcchHHHHHHHHHHHHHHHHhhhhcCchhHHHHHHHHHhhhcc
Q 036062          244 LGEWYSLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNG  318 (333)
Q Consensus       244 ~~~w~~~~~~~~fNlgD~iGR~l~~~~~~~~~~~~~l~~~~~~R~ifiplf~lc~~~~~d~~~~i~~~lfgltNG  318 (333)
                      .+.-...+..+.|.++-++|..+.+....+  +++....... =+.-..++.+.-.-++.+..++.++++|++++
T Consensus       244 ~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~-~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~  315 (394)
T COG2814         244 FSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAAL-LLLALALLALTFTGASPALALALLFLWGFAFS  315 (394)
T ss_pred             CCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHH-HHHHHHHHHHHHhcchHHHHHHHHHHHHHHhh
Confidence            112235677889999999999988874332  3332222211 11111122222112345555666777888775

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=88.49  E-value=29  Score=34.85  Aligned_cols=72  Identities=15%  Similarity=0.093  Sum_probs=39.5

Q ss_pred             HHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhcccCChH
Q 036062           21 AILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPE   97 (333)
Q Consensus        21 ~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla~~~p~~   97 (333)
                      +..-.+.+|...|.=+..+..+..+.+........+.     ...|...++.-++.|++.+..-++.-..+..+|++
T Consensus        88 ip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~-----~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~  159 (462)
T PRK15034         88 VPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNP-----NTPFGIFIVIALLCGFAGANFASSMGNISFFFPKA  159 (462)
T ss_pred             HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccc-----CCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHh
Confidence            3445566676555544445555444444433321111     12356677777778877665555555555668866

>PRK10054 putative transporter; Provisional

Probab=88.05  E-value=26  Score=33.79  Aligned_cols=36  Identities=11%  Similarity=0.091  Sum_probs=17.9

Q ss_pred             HHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHH
Q 036062           14 PFALGTMAILAYNESKIDTRKRNITGYIIFFASTLA   49 (333)
Q Consensus        14 ~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~   49 (333)
                      +...+.....-.+.+|...|.-+..+.....+..+.
T Consensus        54 ~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~   89 (395)
T PRK10054         54 TIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIA   89 (395)
T ss_pred             HHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHH
Confidence            333444455555667776655444455444333333

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=87.99  E-value=26  Score=33.58  Aligned_cols=29  Identities=10%  Similarity=0.074  Sum_probs=18.3

Q ss_pred             CchhHHHHHHHHHhhhcchhhhhhhcccC
Q 036062          301 GDQGWMIFLTSFLGLTNGYLTVCVMTVAP  329 (333)
Q Consensus       301 ~~d~~~~i~~~lfgltNGy~~t~~m~~~P  329 (333)
                      ++.++..+..++.|+..+......+.+.+
T Consensus       305 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~  333 (396)
T TIGR00882       305 TTALEVVILKMLHAFEVPFLLVGCFKYIT  333 (396)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45566666677778777766555554544

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=87.87  E-value=32  Score=34.58  Aligned_cols=93  Identities=18%  Similarity=0.052  Sum_probs=60.9

Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhh
Q 036062           11 VYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGD   90 (333)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gl   90 (333)
                      ++-...+++++-.-.+.+|...|.-+..+.++..+.+++.+.....        .|+..+++=++.|++.+..-.++-++
T Consensus        81 s~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~--------~~~~~~~~R~lqGl~~g~~~pa~~~i  152 (466)
T KOG2532|consen   81 SFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI--------GFYLLLVLRFLQGLGQGVLFPAIGSI  152 (466)
T ss_pred             HHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh--------cchhhHHHHHHhHHHHhHHHhhhhce
Confidence            3445555666655667777777777777777777777777766532        22356777788888888888888888


Q ss_pred             cccCChHHHHHHHhhhhhhhH
Q 036062           91 LSFMYPEFMQSFFAGLAASGA  111 (333)
Q Consensus        91 a~~~p~~~~~a~~~Gqg~aGi  111 (333)
                      .+...|.-=.+...+...+|-
T Consensus       153 ~~~W~P~~Ers~~~ail~~g~  173 (466)
T KOG2532|consen  153 LAKWAPPNERSTFIAILTAGS  173 (466)
T ss_pred             eeeECCHHHHHHHHHHHHHHH
Confidence            888765444444444444443

>PRK10429 melibiose:sodium symporter; Provisional

Probab=87.21  E-value=10  Score=37.63  Aligned_cols=76  Identities=18%  Similarity=0.019  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhccc
Q 036062           14 PFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSF   93 (333)
Q Consensus        14 ~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla~~   93 (333)
                      ++.++...+...+.+|+..+.....+..+..+..+.+.......   +  ...+..++...+.|++.+..+....++.+.
T Consensus       277 i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~i~~~l~g~~~~~~~~~~~am~ad  351 (473)
T PRK10429        277 AANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAA---P--HNALLIVIAGILLNIGTALFWVLQVIMVAD  351 (473)
T ss_pred             HHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccC---c--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            45555556666777788766655555554333322222211111   1  112233344445566666555555554444


Q ss_pred             C
Q 036062           94 M   94 (333)
Q Consensus        94 ~   94 (333)
                      .
T Consensus       352 ~  352 (473)
T PRK10429        352 T  352 (473)
T ss_pred             h
Confidence            4

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=85.91  E-value=34  Score=32.89  Aligned_cols=76  Identities=9%  Similarity=-0.023  Sum_probs=45.5

Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhh
Q 036062           11 VYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGD   90 (333)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gl   90 (333)
                      .+.+...+.....-.+.+|...|.=+..+..+..+.+++....+          .+...++.-++.|++.+..+.....+
T Consensus        52 ~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~----------~~~~ll~~r~l~Gig~~~~~~~~~~~  121 (393)
T PRK09705         52 LPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYP----------QSALLLSSALLGGVGIGIIQAVMPSV  121 (393)
T ss_pred             HHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCc----------chHHHHHHHHHHHhHHHHHhhhhhHH
Confidence            34444455556666677777666656666666655555433322          13345566777888888777776666


Q ss_pred             ccc-CCh
Q 036062           91 LSF-MYP   96 (333)
Q Consensus        91 a~~-~p~   96 (333)
                      ... +|+
T Consensus       122 ~~~~~~~  128 (393)
T PRK09705        122 IKRRFQQ  128 (393)
T ss_pred             HHHHccc
Confidence            665 443

>PRK10504 putative transporter; Provisional

Probab=85.65  E-value=15  Score=36.11  Aligned_cols=29  Identities=10%  Similarity=0.065  Sum_probs=14.2

Q ss_pred             HHHHhhhccCCCccchHHHHHHHHHHHHH
Q 036062           21 AILAYNESKIDTRKRNITGYIIFFASTLA   49 (333)
Q Consensus        21 ~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~   49 (333)
                      .+..++.+|.+.+.-+..+..+..+...+
T Consensus       315 ~~~~~l~~r~g~~~~~~~~~~~~~~~~~~  343 (471)
T PRK10504        315 RIVVQVVNRFGYRRVLVATTLGLALVSLL  343 (471)
T ss_pred             HHHHHHHHHcCchHHHHHHHHHHHHHHHH
Confidence            34455666765544444455444443333

>PRK09528 lacY galactoside permease; Reviewed

Probab=85.15  E-value=38  Score=32.74  Aligned_cols=27  Identities=15%  Similarity=0.062  Sum_probs=15.1

Q ss_pred             CchhHHHHHHHHHhhhcchhhhhhhcc
Q 036062          301 GDQGWMIFLTSFLGLTNGYLTVCVMTV  327 (333)
Q Consensus       301 ~~d~~~~i~~~lfgltNGy~~t~~m~~  327 (333)
                      ++.++..+..++.|+..+-.....+.+
T Consensus       313 ~~~~~~~~~~~l~g~~~~~~~~~~~~~  339 (420)
T PRK09528        313 TGPLEVSILKLLHAFEVPFLLVGVFKY  339 (420)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455555555677777665554444333

>PRK09669 putative symporter YagG; Provisional

Probab=84.50  E-value=16  Score=35.76  Aligned_cols=75  Identities=9%  Similarity=-0.059  Sum_probs=36.2

Q ss_pred             hhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhc
Q 036062           12 YQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDL   91 (333)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla   91 (333)
                      +.++.++...+..++.+|.+.+.....+.++..+....+...+  .      ..++..++..++.|++.+..+....++.
T Consensus       273 ~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~i~g~~~~~~~~~~~am~  344 (444)
T PRK09669        273 GMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIP--P------SNVWLIFALNILFNFIQNLTTPLQWSMF  344 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC--c------chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444445555555677776554444444433332222222221  1      1123344455566777776666666666


Q ss_pred             ccC
Q 036062           92 SFM   94 (333)
Q Consensus        92 ~~~   94 (333)
                      +..
T Consensus       345 ad~  347 (444)
T PRK09669        345 SDV  347 (444)
T ss_pred             Hhh
Confidence            543

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=84.34  E-value=42  Score=32.61  Aligned_cols=95  Identities=15%  Similarity=0.060  Sum_probs=48.0

Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhh
Q 036062           11 VYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGD   90 (333)
Q Consensus        11 ~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gl   90 (333)
                      .+.+...+.....-.+.+|+..|.-+..+..+..+..+....   .+       .+...++.-++.|++.+......+..
T Consensus        59 ~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---a~-------~~~~l~~~r~l~Gi~~~~~~~~~~~~  128 (413)
T PRK15403         59 LYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF---TT-------SMTQFLIARFIQGTSICFIATVGYVT  128 (413)
T ss_pred             HHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH---cC-------CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344455555556666778876665555555444433333222   11       13344555666777776655555554


Q ss_pred             cc-cCChHH----HHHHHhhhhhhhHHHHH
Q 036062           91 LS-FMYPEF----MQSFFAGLAASGALTSG  115 (333)
Q Consensus        91 a~-~~p~~~----~~a~~~Gqg~aGi~~s~  115 (333)
                      .. .+|++.    +..+..+.++++++..+
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  158 (413)
T PRK15403        129 VQEAFGQTKGIKLMAIITSIVLVAPIIGPL  158 (413)
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            43 456543    23334445555555433

>PRK10489 enterobactin exporter EntS; Provisional

Probab=83.81  E-value=25  Score=33.96  Aligned_cols=33  Identities=21%  Similarity=0.088  Sum_probs=18.3

Q ss_pred             HHHHHHHHhhhhHhhccchhhhc-ccCChHHHHH
Q 036062           69 VCVFVALFGVADAHVRGGIVGDL-SFMYPEFMQS  101 (333)
Q Consensus        69 ~l~~v~~~g~~~~~~q~s~~gla-~~~p~~~~~a  101 (333)
                      ..+...+.|.+.+..+....++. ...|+++-..
T Consensus       315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~  348 (417)
T PRK10489        315 AVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGR  348 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHH
Confidence            34445556666666555555554 4567775443

>PF13347 MFS_2: MFS/sugar transport protein

Probab=83.72  E-value=17  Score=35.42  Aligned_cols=83  Identities=13%  Similarity=0.078  Sum_probs=55.7

Q ss_pred             CceehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhc
Q 036062            5 TRALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVR   84 (333)
Q Consensus         5 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q   84 (333)
                      .+.+..++.++.++...+..++.+|+..+.-+..++++..+..+.+.+++..        ..+..++...+.|++.+...
T Consensus       262 ~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~~~l~gi~~~~~~  333 (428)
T PF13347_consen  262 ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPG--------SPWLVLILFILAGIGYGAFF  333 (428)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHhHhhhcccc
Confidence            3445567788888888888889999977777777887777766666666531        12345566666777777666


Q ss_pred             cchhhhcccCC
Q 036062           85 GGIVGDLSFMY   95 (333)
Q Consensus        85 ~s~~gla~~~p   95 (333)
                      ....++-+..-
T Consensus       334 ~~~~a~~ad~i  344 (428)
T PF13347_consen  334 VIPWAMLADVI  344 (428)
T ss_pred             cccccccccch
Confidence            65555555433

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=83.24  E-value=22  Score=32.96  Aligned_cols=75  Identities=8%  Similarity=0.128  Sum_probs=39.6

Q ss_pred             chHHHHHHHHHHHHHHhhhhhccc-ccccccCcchHHHH-HHHHHHHHHHHHhhhhc--CchhHHHHHHHHHhhhcchhh
Q 036062          246 EWYSLVLIASYNVWDLIARYIPLV-KCVKLESRKGLMIT-ILCRFLLVPAFYFTAKY--GDQGWMIFLTSFLGLTNGYLT  321 (333)
Q Consensus       246 ~w~~~~~~~~fNlgD~iGR~l~~~-~~~~~~~~~~l~~~-~~~R~ifiplf~lc~~~--~~d~~~~i~~~lfgltNGy~~  321 (333)
                      +|-..+..-+|..|=++|=+.-+. -+... +||+.... ..+-.+|..+-.+|.+.  .+.......+.++|+-.|.+.
T Consensus       140 ~~~~~~~~I~fv~g~~~G~~~ig~~nkt~~-kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~  218 (267)
T PF07672_consen  140 NWIIPIFQILFVAGYFLGPFTIGLWNKTNY-KRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFL  218 (267)
T ss_pred             chhhHHHHHHHHHHHhhhceeeccchhhhh-hhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence            355566677788888888654443 22222 34443332 22345565666666542  233333334666776666554

>PRK09669 putative symporter YagG; Provisional

Probab=83.19  E-value=48  Score=32.40  Aligned_cols=20  Identities=10%  Similarity=0.110  Sum_probs=12.6

Q ss_pred             HHHHHHHHHhhhcchhhhhh
Q 036062          305 WMIFLTSFLGLTNGYLTVCV  324 (333)
Q Consensus       305 ~~~i~~~lfgltNGy~~t~~  324 (333)
                      ..++..+++|+..|-...+.
T Consensus       321 ~~~~~~~i~g~~~~~~~~~~  340 (444)
T PRK09669        321 LIFALNILFNFIQNLTTPLQ  340 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            34555677888777655443

>TIGR00806 rfc RFC reduced folate carrier

Probab=82.78  E-value=59  Score=33.10  Aligned_cols=98  Identities=15%  Similarity=0.008  Sum_probs=57.3

Q ss_pred             hhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhc
Q 036062           12 YQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDL   91 (333)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla   91 (333)
                      +...-.++++..-.+.+|+..|.=+..+.+...+..+++++..          .+....++=++.|++.|..-+..--++
T Consensus        71 F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~----------Sl~~L~i~R~llGvaEA~~~A~~syI~  140 (511)
T TIGR00806        71 LPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT----------SVWHMQLMEVFYSVTMAARIAYSSYIF  140 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444445555555566776666655555555555555544322          244566677778888876665555566


Q ss_pred             ccCChHH----HHHHHhhhhhhhHHHHHHHHH
Q 036062           92 SFMYPEF----MQSFFAGLAASGALTSGLRLL  119 (333)
Q Consensus        92 ~~~p~~~----~~a~~~Gqg~aGi~~s~~~ii  119 (333)
                      ..+|++.    +.-..+|+.++++++.++--.
T Consensus       141 ~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql  172 (511)
T TIGR00806       141 SLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL  172 (511)
T ss_pred             HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7789553    334456666666666554444

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>PF13347 MFS_2: MFS/sugar transport protein

Probab=82.37  E-value=48  Score=32.19  Aligned_cols=29  Identities=24%  Similarity=0.308  Sum_probs=20.1

Q ss_pred             HHHHHHHHhhhhHhhccchhhhcccCChH
Q 036062           69 VCVFVALFGVADAHVRGGIVGDLSFMYPE   97 (333)
Q Consensus        69 ~l~~v~~~g~~~~~~q~s~~gla~~~p~~   97 (333)
                      ..+...+..++-++.|-..-++.+.+.++
T Consensus       106 ~~~~~~l~~~~~t~~~i~~~al~~~lt~~  134 (428)
T PF13347_consen  106 LFVFYILFDIAYTFVQIPYNALIPELTPD  134 (428)
T ss_pred             HHHHHHHHHHhhhhccCchhhcCcccccc
Confidence            35555555888888888877777776643

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=82.29  E-value=21  Score=27.56  Aligned_cols=79  Identities=16%  Similarity=0.050  Sum_probs=43.0

Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhh
Q 036062           10 LVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVG   89 (333)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~g   89 (333)
                      ..+.+..++.....-+..+|.+.|..+..+..+..+..+.....+          .++..++...+.|.+.+..+.....
T Consensus         5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~g~~~~~~~~~~~~   74 (141)
T TIGR00880         5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS----------NITVLIIARFLQGFGAAFALVAGAA   74 (141)
T ss_pred             EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc----------cHHHHHHHHHHHHHHHHHHHHhHHH
Confidence            345566666666666667777655555445444433333322211          1334455566777777776666666


Q ss_pred             hccc-CChHH
Q 036062           90 DLSF-MYPEF   98 (333)
Q Consensus        90 la~~-~p~~~   98 (333)
                      +... +|++.
T Consensus        75 ~~~~~~~~~~   84 (141)
T TIGR00880        75 LIADIYPPEE   84 (141)
T ss_pred             HHHHHCChhh
Confidence            5444 55443

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=81.48  E-value=55  Score=31.87  Aligned_cols=94  Identities=11%  Similarity=-0.016  Sum_probs=46.2

Q ss_pred             HHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhccc-CChH--
Q 036062           21 AILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSF-MYPE--   97 (333)
Q Consensus        21 ~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla~~-~p~~--   97 (333)
                      ++.-.+.+|+..|.=+..+.++..+.++...+.+...  ..+...+...++.=.+.|++.+........+.+. .|++  
T Consensus        81 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~r  158 (432)
T PRK10406         81 WLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYE--TIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRK  158 (432)
T ss_pred             HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCch--hHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcc
Confidence            3333456776555545555555555554433332110  0001122334455567777777666666666664 4644  


Q ss_pred             --HHHHHHhhhhhhhHHHHHH
Q 036062           98 --FMQSFFAGLAASGALTSGL  116 (333)
Q Consensus        98 --~~~a~~~Gqg~aGi~~s~~  116 (333)
                        +......|+..+.++..++
T Consensus       159 g~~~~~~~~~~~~G~~~~~~~  179 (432)
T PRK10406        159 GFYASFQYVTLIGGQLLALLV  179 (432)
T ss_pred             cHHHHHHHHHHHHHHHHHHHH
Confidence              3344444555544544443

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=81.10  E-value=35  Score=34.38  Aligned_cols=81  Identities=12%  Similarity=0.156  Sum_probs=50.9

Q ss_pred             HhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhcccCChHHHHHHH
Q 036062           24 AYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDLSFMYPEFMQSFF  103 (333)
Q Consensus        24 ~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla~~~p~~~~~a~~  103 (333)
                      .++.+|.+...|+..|+++..+....+........ ..+....+..+...++.|++..+.....++++...-|+..++.+
T Consensus       341 ~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~-~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~  419 (500)
T PRK09584        341 NKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFAN-DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFI  419 (500)
T ss_pred             HHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHH
Confidence            45566777778888888887666655544432211 11122233566677778999999999999988777555444444


Q ss_pred             hh
Q 036062          104 AG  105 (333)
Q Consensus       104 ~G  105 (333)
                      .|
T Consensus       420 ~g  421 (500)
T PRK09584        420 MG  421 (500)
T ss_pred             HH
Confidence            33

>PRK11010 ampG muropeptide transporter; Validated

Probab=80.99  E-value=64  Score=32.32  Aligned_cols=51  Identities=10%  Similarity=-0.043  Sum_probs=29.1

Q ss_pred             HHHHHHHHHHHhhhhHhhccchhhhccc-CChH----HHHHHHhhhhhhhHHHHHH
Q 036062           66 FLGVCVFVALFGVADAHVRGGIVGDLSF-MYPE----FMQSFFAGLAASGALTSGL  116 (333)
Q Consensus        66 f~~~l~~v~~~g~~~~~~q~s~~gla~~-~p~~----~~~a~~~Gqg~aGi~~s~~  116 (333)
                      ++...+..++.+++.+..+-..-++... +|++    .....+.|..++.++...+
T Consensus       107 l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l  162 (491)
T PRK11010        107 LRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGL  162 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            4445555556676776666555565544 5533    3444566677676666543

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=80.41  E-value=66  Score=32.10  Aligned_cols=80  Identities=13%  Similarity=0.078  Sum_probs=46.2

Q ss_pred             ceehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhcc
Q 036062            6 RALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRG   85 (333)
Q Consensus         6 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~   85 (333)
                      +|...+|.+.....+...-++.+|...|.=+..+..+..+..++..   ..+       .++..++.-.+.|++.+....
T Consensus        44 ~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~---~a~-------~~~~li~~r~l~G~g~~~~~~  113 (495)
T PRK14995         44 LWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAA---FSP-------TASWLIATRALLAIGAAMIVP  113 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH---HcC-------CHHHHHHHHHHHHHHHHHHHH
Confidence            4556667777777777666777887665545555555444333322   221       133455555677887777766


Q ss_pred             chhh-hcccCC
Q 036062           86 GIVG-DLSFMY   95 (333)
Q Consensus        86 s~~g-la~~~p   95 (333)
                      .... +...++
T Consensus       114 ~~~~~l~~~~~  124 (495)
T PRK14995        114 ATLAGIRATFT  124 (495)
T ss_pred             HHHHHHHHHcC
Confidence            5555 445563

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	333
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	97.89
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	97.54
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	96.18
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	95.05
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	94.34
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	87.23

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=97.89  E-value=0.00039  Score=65.96  Aligned_cols=104  Identities=11%  Similarity=-0.033  Sum_probs=61.3

Q ss_pred             eehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhh-hccCCCCcchHHHHHHHHHHHhhhhHhhcc
Q 036062            7 ALTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDL-ATSGEGGLGPFLGVCVFVALFGVADAHVRG   85 (333)
Q Consensus         7 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~   85 (333)
                      ++..++.++..+...+.-.+.+|...|.=+..+.++..+..++....+. .+       .++..++.-++.|++.+....
T Consensus        66 ~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~l~G~~~~~~~~  138 (451)
T 1pw4_A           66 FALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATS-------SIAVMFVLLFLCGWFQGMGWP  138 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHS-------SSSHHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhccc-------cHHHHHHHHHHHHHHhhhccc
Confidence            3444566666666777777778877665555566665555555444221 21       123455567778888888877


Q ss_pred             chhhhccc-CChH----HHHHHHhhhhhhhHHHHHHH
Q 036062           86 GIVGDLSF-MYPE----FMQSFFAGLAASGALTSGLR  117 (333)
Q Consensus        86 s~~gla~~-~p~~----~~~a~~~Gqg~aGi~~s~~~  117 (333)
                      ...++.+. +|++    .......+.++++++...+-
T Consensus       139 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~  175 (451)
T 1pw4_A          139 PCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLF  175 (451)
T ss_dssp             HHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred             hHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            77777665 4533    33344556666666555443

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=97.54  E-value=0.0023  Score=60.35  Aligned_cols=100  Identities=5%  Similarity=-0.135  Sum_probs=60.9

Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhh
Q 036062           10 LVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVG   89 (333)
Q Consensus        10 ~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~g   89 (333)
                      .++.+...+.....-.+.+|...|.-+..+.++..+..++.......+       .++..++.-++.|++.+..+.....
T Consensus        68 ~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~l~G~~~~~~~~~~~~  140 (438)
T 3o7q_A           68 SAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIM-------NYTLFLVGLFIIAAGLGCLETAANP  140 (438)
T ss_dssp             HHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhccccc-------cHHHHHHHHHHHHhhHHHhhhhHHH
Confidence            344455555556666677887766656666666555554442222221       2455677778889999888888777


Q ss_pred             hccc-CChHH----HHHHHhhhhhhhHHHHHH
Q 036062           90 DLSF-MYPEF----MQSFFAGLAASGALTSGL  116 (333)
Q Consensus        90 la~~-~p~~~----~~a~~~Gqg~aGi~~s~~  116 (333)
                      +.+. +|++.    +.....+.++++++...+
T Consensus       141 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~  172 (438)
T 3o7q_A          141 FVTVLGPESSGHFRLNLAQTFNSFGAIIAVVF  172 (438)
T ss_dssp             HHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            7766 46443    444556666666665553

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=96.18  E-value=0.058  Score=51.53  Aligned_cols=153  Identities=10%  Similarity=-0.014  Sum_probs=76.8

Q ss_pred             hhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCC--------CCcchHHHHHHHHHHHhhhh
Q 036062            9 TLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGE--------GGLGPFLGVCVFVALFGVAD   80 (333)
Q Consensus         9 ~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~--------~~~~~f~~~l~~v~~~g~~~   80 (333)
                      ..++.+...+..++.-.+.+|+..|.=+..+.+++.+..++....+......        .-...+...++.=++.|++.
T Consensus        61 ~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~R~l~G~g~  140 (491)
T 4gc0_A           61 VASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGV  140 (491)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            3345555666666666777777655555556666555555433322110000        00223556667777888888


Q ss_pred             HhhccchhhhcccC-ChHHHHHH----HhhhhhhhHHHHHHHHHHHhhccCCccccchhhhHHhHHHHHHHHHHHHHHHH
Q 036062           81 AHVRGGIVGDLSFM-YPEFMQSF----FAGLAASGALTSGLRLLTKAAFEKSHDGLRKGVMLFLAICTSFEFVCILLYAF  155 (333)
Q Consensus        81 ~~~q~s~~gla~~~-p~~~~~a~----~~Gqg~aGi~~s~~~ii~~~~~~~~~~~~~~s~~iyF~~a~~~~~~~~~~~~~  155 (333)
                      +........+.+.. |++.-...    ..+...+.++..+.........+.. ......-...+.+..+..++.+.... 
T Consensus       141 G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-  218 (491)
T 4gc0_A          141 GLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDAS-WLNTDGWRYMFASECIPALLFLMLLY-  218 (491)
T ss_dssp             HHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT-TTTTTHHHHHHHTTHHHHHHHHHHGG-
T ss_pred             HHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccc-cccchhhHHHhhhhhhhhhhhhhhhh-
Confidence            87777777777664 55443333    3334444444444333332222111 11122333344444444444444444 


Q ss_pred             HcCCChHH
Q 036062          156 FFPKLPIV  163 (333)
Q Consensus       156 ~l~k~~~~  163 (333)
                      .++.+|..
T Consensus       219 ~~peSp~~  226 (491)
T 4gc0_A          219 TVPESPRW  226 (491)
T ss_dssp             GSCCCHHH
T ss_pred             cCCCChHH
Confidence            67777754

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=95.05  E-value=0.024  Score=52.25  Aligned_cols=99  Identities=12%  Similarity=-0.011  Sum_probs=58.2

Q ss_pred             ehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccch
Q 036062            8 LTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGI   87 (333)
Q Consensus         8 ~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~   87 (333)
                      +...+.++..+.....-.+.+|...|.-+..+..+..+........+          .++..++..++.|++.+..+...
T Consensus        40 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----------~~~~l~~~~~l~g~~~~~~~~~~  109 (375)
T 2gfp_A           40 VMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTS----------SLTVLIAASAMQGMGTGVGGVMA  109 (375)
T ss_dssp             HHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhc----------cHHHHHHHHHHHHHHHHhhhhhH
Confidence            33445555556666666677888777666666666655555444332          23445556667787777777776


Q ss_pred             hhhcccC-Ch----HHHHHHHhhhhhhhHHHHHH
Q 036062           88 VGDLSFM-YP----EFMQSFFAGLAASGALTSGL  116 (333)
Q Consensus        88 ~gla~~~-p~----~~~~a~~~Gqg~aGi~~s~~  116 (333)
                      ..+.+.. |+    +.......+.++++++...+
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  143 (375)
T 2gfp_A          110 RTLPRDLYERTQLRHANSLLNMGILVSPLLAPLI  143 (375)
T ss_dssp             HHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence            6666553 32    23455555666665555443

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=94.34  E-value=0.45  Score=45.29  Aligned_cols=98  Identities=10%  Similarity=0.121  Sum_probs=52.7

Q ss_pred             ehhhhhHHHHHHHHHHHhhhcc-CCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccc
Q 036062            8 LTLVYQPFALGTMAILAYNESK-IDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGG   86 (333)
Q Consensus         8 ~~~~~~~~~l~~~~~~~~~~~~-~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s   86 (333)
                      +...+.+...+...+.-.+.+| +..|.=+..+.++..+..++..   ..+       .++..++..++.|++.+.....
T Consensus        59 ~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~l~g~~~~~~~~~  128 (491)
T 4aps_A           59 IMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLGHIVLA---LPF-------GASALFGSIILIIIGTGFLKPN  128 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH---SCC-------STTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHH---Hhh-------hHHHHHHHHHHHHHHHHhccch
Confidence            3344555666666666667777 6655444445554444433322   211       1233455666778888877777


Q ss_pred             hhhhccc-CChHH------HHHHHhhhhhhhHHHHH
Q 036062           87 IVGDLSF-MYPEF------MQSFFAGLAASGALTSG  115 (333)
Q Consensus        87 ~~gla~~-~p~~~------~~a~~~Gqg~aGi~~s~  115 (333)
                      ..++.+. +|++.      ...+..+.++++++...
T Consensus       129 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~  164 (491)
T 4aps_A          129 VSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPL  164 (491)
T ss_dssp             HHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHH
Confidence            7777664 66433      22233555555555443

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=87.23  E-value=3.9  Score=38.54  Aligned_cols=42  Identities=12%  Similarity=0.050  Sum_probs=26.0

Q ss_pred             hhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHH
Q 036062           12 YQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLL   53 (333)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~   53 (333)
                      ..+..+...++...+.+|+..|...+.+...+.+.+..+...
T Consensus       321 ~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~  362 (491)
T 4gc0_A          321 VGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTA  362 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHH
Confidence            344455555666677788777777777776666555554443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	333
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	97.97
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	96.05
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	84.21
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	81.08

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=97.97  E-value=0.00026  Score=64.35  Aligned_cols=104  Identities=13%  Similarity=-0.020  Sum_probs=60.3

Q ss_pred             ehhhhhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccch
Q 036062            8 LTLVYQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGI   87 (333)
Q Consensus         8 ~~~~~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~   87 (333)
                      +..++.++..++..+.-.+.+|...|.-+..++++..+..++....+...      ..+...++.-.+.|++.+......
T Consensus        64 ~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~  137 (447)
T d1pw4a_          64 ALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWAT------SSIAVMFVLLFLCGWFQGMGWPPC  137 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHH------SSSSHHHHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhh------hhHHHHHHHHHHHHHhhhhhhhHH
Confidence            34445566666666667777887766666667766666555555544322      123345555666777777666666


Q ss_pred             hhhcc-cCChHH----HHHHHhhhhhhhHHHHHHH
Q 036062           88 VGDLS-FMYPEF----MQSFFAGLAASGALTSGLR  117 (333)
Q Consensus        88 ~gla~-~~p~~~----~~a~~~Gqg~aGi~~s~~~  117 (333)
                      ..+.+ .+|++.    +..+..+.++++++....-
T Consensus       138 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~  172 (447)
T d1pw4a_         138 GRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLF  172 (447)
T ss_dssp             HHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred             HHHHHHHHHhhcccccccccccccchhhhhhhhhh
Confidence            65544 466553    3333456666666655433

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=96.05  E-value=0.029  Score=48.71  Aligned_cols=75  Identities=5%  Similarity=-0.006  Sum_probs=39.8

Q ss_pred             HHHHHHHHHHHHHhhhhhcccccccccCcchHHHHHHHHHHHHHHHHhhhhcCchhHHHHHHHHHhhhcchhhhhhhc
Q 036062          249 SLVLIASYNVWDLIARYIPLVKCVKLESRKGLMITILCRFLLVPAFYFTAKYGDQGWMIFLTSFLGLTNGYLTVCVMT  326 (333)
Q Consensus       249 ~~~~~~~fNlgD~iGR~l~~~~~~~~~~~~~l~~~~~~R~ifiplf~lc~~~~~d~~~~i~~~lfgltNGy~~t~~m~  326 (333)
                      .........++..+|+.+..+...+. +++.+...  .-++....+++....++.++.++..+++|+..|-.......
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~l~~r~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~  335 (417)
T d1pv7a_         261 FGYVTTMGELLNASIMFFAPLIINRI-GGKNALLL--AGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFK  335 (417)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHH-CHHHHHHH--HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcccccccccccccchhhhhhhhccc-ccccchhh--hHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHHHHH
Confidence            44556677778888887776532222 23332221  12222222222223456666677788888887766554433

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=84.21  E-value=2.4  Score=35.57  Aligned_cols=83  Identities=11%  Similarity=0.000  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHhhhhHhhccchhhhccc-CChHHHHHHHh-----hhhhhhHHHHHH-HHHHHhhccCCccccchhhhHHh
Q 036062           67 LGVCVFVALFGVADAHVRGGIVGDLSF-MYPEFMQSFFA-----GLAASGALTSGL-RLLTKAAFEKSHDGLRKGVMLFL  139 (333)
Q Consensus        67 ~~~l~~v~~~g~~~~~~q~s~~gla~~-~p~~~~~a~~~-----Gqg~aGi~~s~~-~ii~~~~~~~~~~~~~~s~~iyF  139 (333)
                      +..++...+.|++.+........+... +|++.....+.     ++++++.+.+.+ -.+....      +   -...|.
T Consensus       313 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~------g---~~~~~~  383 (417)
T d1pv7a_         313 LEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESI------G---FQGAYL  383 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH------C---HHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------C---HHHHHH
Confidence            344555666677777666666665554 78776544333     333444433322 1222211      1   123355


Q ss_pred             HHHHHHHHHHHHHHHHHcCC
Q 036062          140 AICTSFEFVCILLYAFFFPK  159 (333)
Q Consensus       140 ~~a~~~~~~~~~~~~~~l~k  159 (333)
                      ..+.+..+.+++.++ .++|
T Consensus       384 ~~~~~~~~~~~~~~~-~l~~  402 (417)
T d1pv7a_         384 VLGLVALGFTLISVF-TLSG  402 (417)
T ss_dssp             HHHHHHHHHHHHHHH-HSCC
T ss_pred             HHHHHHHHHHHHHHH-hhcC
Confidence            555555556666665 5544

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=81.08  E-value=5.4  Score=34.26  Aligned_cols=84  Identities=12%  Similarity=0.008  Sum_probs=39.6

Q ss_pred             hhHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHhhhccCCCCcchHHHHHHHHHHHhhhhHhhccchhhhc
Q 036062           12 YQPFALGTMAILAYNESKIDTRKRNITGYIIFFASTLALLLLDLATSGEGGLGPFLGVCVFVALFGVADAHVRGGIVGDL   91 (333)
Q Consensus        12 ~~~~~l~~~~~~~~~~~~~~~~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~gla   91 (333)
                      +.+...+..++.-+..+|...+.|......................     ....+..++...+.|++.+........++
T Consensus       294 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  368 (447)
T d1pw4a_         294 YEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNP-----AGNPTVDMICMIVIGFLIYGPVMLIGLHA  368 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCC-----TTCHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhhhhhhhhhccccccccccchhHHHHHHHHHHHHhcc-----cccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444455555555666676666555444443322222222222111     12233444555555665555555555444


Q ss_pred             c-cCChHHHH
Q 036062           92 S-FMYPEFMQ  100 (333)
Q Consensus        92 ~-~~p~~~~~  100 (333)
                      . .+|++...
T Consensus       369 ~~~~p~~~~g  378 (447)
T d1pw4a_         369 LELAPKKAAG  378 (447)
T ss_dssp             HHTSCTTHHH
T ss_pred             HHHcCHHHHH
Confidence            4 56766544