Citrus Sinensis ID: 036069

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170----
Protein Sequence
QKIITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKYYSAEPYIVILQ
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHHcccHHHHHHHHHHHccccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHHcHHHHHHHHHHcccccccccccHHHHHHHHHccccEEEEccccEEEccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHcccccHHEHHEEcccccHHHHHHHHHHccHHHHHHHHccccccHHHHHHHHcHHHHHHHHHHcccccccccccccccHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHHHHccccccEcccccEEEEEc
Coil and Loop (DISEMBL)
QKIITDIDSVMQVTRYILKNDWKDLEEYIMSKTsntltdkitgglSIFDlivnsdappmfLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRynpnlpnvrdkskllpihkaaqlghRDTVRYLLSKTtahldghdWSTLLKDLINcnlfgkyysaepyIVILQ
Flexible Loop (DISEMBL)
qkiitdidsvmqVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKYYSAEPYIVILQ
Low Complexity Region (SEG)
QKIITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKYYSAEPYIVILQ
Disordered region (IsUnstruct)
**IITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKYYSAEPYIVIL*
Disordered Region (DISOPRED)
***ITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKYYSAEPYIVILQ
Disordered Region (DISEMBL)
QKIITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKYYSAEPYIVILQ
Disordered Region (DISPRO)
**IITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKYYSAEPYIVILQ
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
QKIITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKYYSAEPYIVILQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	174	2.2.26 [Sep-21-2011]
Q8VHS6	583	Ankyrin repeat and SOCS b	yes	no	0.367	0.109	0.338	0.0001
Q8HXA6	588	Ankyrin repeat and SOCS b	yes	no	0.367	0.108	0.323	0.0003

>sp|Q8VHS6|ASB15_MOUSE Ankyrin repeat and SOCS box protein 15 OS=Mus musculus GN=Asb15 PE=2 SV=2

 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 77  VSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS 136
           ++++G + +  AA GG    I +L++Y  +  NV +++  LPIH+AA  GH   ++YL+ 
Sbjct: 239 LADDGASVLFEAAGGGNPDCISLLLKYGGS-GNVPNRAGHLPIHRAAYEGHYLALKYLIP 297

Query: 137 KTTAH 141
            T+ H
Sbjct: 298 VTSKH 302

May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
Mus musculus (taxid: 10090)

>sp|Q8HXA6|ASB15_BOVIN Ankyrin repeat and SOCS box protein 15 OS=Bos taurus GN=ASB15 PE=2 SV=2

 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 77  VSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS 136
           ++++G + +  AA GG    I +L+ Y  +  N+ +++  LPIH+AA  GH   ++YL+ 
Sbjct: 239 LADDGASVLFEAAGGGNPDCISLLLEYGGS-GNIPNRAGHLPIHRAAYEGHYLALKYLIP 297

Query: 137 KTTAH 141
            T+ H
Sbjct: 298 VTSKH 302

May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
225425076	563	PREDICTED: ankyrin repeat-containing pro	0.810	0.250	0.305	6e-09
356558266	584	PREDICTED: uncharacterized protein LOC10	0.810	0.241	0.300	8e-08
224120310	252	predicted protein [Populus trichocarpa]	0.833	0.575	0.294	2e-07
297738254	472	unnamed protein product [Vitis vinifera]	0.603	0.222	0.330	3e-07
147860696	891	hypothetical protein VITISV_011174 [Viti	0.804	0.157	0.289	3e-07
224120488	610	predicted protein [Populus trichocarpa]	0.850	0.242	0.3	3e-07
147843694	289	hypothetical protein VITISV_011483 [Viti	0.810	0.487	0.268	2e-06
356498501	567	PREDICTED: uncharacterized protein LOC10	0.816	0.250	0.287	2e-06
147822636	216	hypothetical protein VITISV_038214 [Viti	0.913	0.736	0.242	6e-06
359472754	789	PREDICTED: ankyrin repeat-containing pro	0.804	0.177	0.296	7e-06

>gi|225425076|ref|XP_002271486.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera]

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 3/144 (2%)

Query: 18  LKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWV 77
           +K DWK  E  I       +   IT G      I  +     F++++V  +    L E  
Sbjct: 64  MKGDWKTAEG-IFKMFPPAVRMTITQGRDTTLHIAAAAKHVQFVEEMVKMMEPKDL-ELQ 121

Query: 78  SNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           +   N  +  AA  G  ++ E++++ N NLP ++    ++P+H AA LGH + VRYL +K
Sbjct: 122 NKYSNTALCFAAASGIVRIAEVMVKKNENLPMIQGGGGMIPLHMAALLGHSEMVRYLYNK 181

Query: 138 TT-AHLDGHDWSTLLKDLINCNLF 160
           T   HL   DW  LL   I+ +L+
Sbjct: 182 TVHEHLAPGDWVGLLNTCISTDLY 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558266|ref|XP_003547428.1| PREDICTED: uncharacterized protein LOC100814409 [Glycine max]

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 18  LKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWV 77
           LK DWK+ ++ I+ +    L   IT G +    I        F+++LV  + +  L E +
Sbjct: 50  LKGDWKEAKK-ILDQDPTLLKSAITKGWATVLHIAVGANHECFVEELVKLLSREDL-ELL 107

Query: 78  SNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            ++GN     AA  G   + EI+   N +LP +R    + P+H A   G  +  RYL  K
Sbjct: 108 DDKGNTAFCFAAAVGNVHIAEIMRIKNESLPTIRGGEGVTPLHLAVLQGRSEMTRYLFDK 167

Query: 138 TTAHLDGHDWSTLLKDLINCNLF 160
           T   L   DW TL    +N  L+
Sbjct: 168 TREILYDDDWITLFLICVNSGLY 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120310|ref|XP_002331016.1| predicted protein [Populus trichocarpa] gi|222872946|gb|EEF10077.1| predicted protein [Populus trichocarpa]

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 8/153 (5%)

Query: 11  MQVTRYILKNDWKDLE---EYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSK 67
           +Q+    L  DW+  E   E    + +  +T +    L I     ++     F+ +LV K
Sbjct: 51  LQLYHAALSGDWETAEGIYESFRGEVNARITKRGETALHIAAAAEHTH----FVKQLVGK 106

Query: 68  VHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGH 127
           +    L  + +  GN     AA  G   L +++M    +L   R +  LLPI+ AA LGH
Sbjct: 107 MSIEALT-YKNEAGNTAFCFAAISGVEALAKVMMETGRDLAMTRGRENLLPIYMAALLGH 165

Query: 128 RDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLF 160
           R  V YL  +T   L   D  TLL  LIN +++
Sbjct: 166 RGMVSYLYDETNEQLTDSDRITLLVALINSDIY 198

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738254|emb|CBI27455.3| unnamed protein product [Vitis vinifera]

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 4/109 (3%)

Query: 44  GLSIFDLIVNSDA--PPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILM 101
            L++F L ++  A     F++++V  +    L E  +   N  +  AA  G  ++ E+++
Sbjct: 84  SLTLFTLPISKHAIGHVQFVEEMVKMMEPKDL-ELQNKYSNTALCFAAASGIVRIAEVMV 142

Query: 102 RYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWST 149
           + N NLP ++    ++P+H AA LGH + VRYL +KT   HL   DWST
Sbjct: 143 KKNENLPMIQGGGGMIPLHMAALLGHSEMVRYLYNKTVHEHLAPGDWST 191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147860696|emb|CAN81449.1| hypothetical protein VITISV_011174 [Vitis vinifera]

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 5/145 (3%)

Query: 18  LKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWV 77
           LK DW +  + I       +  +IT  L     I  +     F++++V  +  N L+  +
Sbjct: 337 LKGDW-ETAKGIFEIHPTAVRVRITRNLDTVLHIAAAAKRTHFVEEVVGLMDPNDLE--L 393

Query: 78  SNE-GNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS 136
            NE  N     AA  G  ++ E++++ N +LP +R   +++P+H AA LGH + V YL +
Sbjct: 394 QNENSNTAFCFAAAAGTVRIAEVMVKKNDHLPMIRGNQQMMPLHMAALLGHSEMVWYLYN 453

Query: 137 KTTAH-LDGHDWSTLLKDLINCNLF 160
           KT    L   DW  +L   I+ +L+
Sbjct: 454 KTNHQDLKDEDWIGILNTCISTDLY 478

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120488|ref|XP_002331060.1| predicted protein [Populus trichocarpa] gi|222872990|gb|EEF10121.1| predicted protein [Populus trichocarpa]

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 2/150 (1%)

Query: 11  MQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQ 70
           +Q+ +  L  DW D  E I       +  +IT        I  +     F+ +LV  +  
Sbjct: 50  LQLYQAALSGDW-DTAEGIYKLCPGEVNARITKRGETALHIAAAAEHTHFVKQLVGMMSI 108

Query: 71  NFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDT 130
             L  + S+ GN     AA  G   L +++M   P+L   R +  LLPI+ A  LGHR  
Sbjct: 109 EAL-AYRSSAGNTAFCFAAISGVEALAKVMMDKKPDLAMTRGRGNLLPIYMATLLGHRGM 167

Query: 131 VRYLLSKTTAHLDGHDWSTLLKDLINCNLF 160
           V YL  +T   L   D   LL  LIN +++
Sbjct: 168 VSYLYDETKEQLTDGDRIKLLVALINSDIY 197

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147843694|emb|CAN79870.1| hypothetical protein VITISV_011483 [Vitis vinifera]

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 4/145 (2%)

Query: 6   DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKI-TGGLSIFDLIVNSDAPPM-FLDK 63
           D+ S +++ + +L  DWK +    +     +++ +I T G S+  + V      M F++K
Sbjct: 69  DVTSCLELYQAVLNGDWK-IASIFLKCYPKSISARIETDGASVLHIAVELGVASMGFVEK 127

Query: 64  LVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAA 123
           LV  +    L +   ++G   +  AA  G  K  ++L+   P+LPN   ++ L P+H A 
Sbjct: 128 LVEFMPSEEL-DLRDSDGATALTSAARAGNIKAAKLLVNKKPSLPNSCQRNNLAPLHSAV 186

Query: 124 QLGHRDTVRYLLSKTTAHLDGHDWS 148
           + GH++   YLL  T   +D   +S
Sbjct: 187 RYGHKELTLYLLGVTRDDVDPSPFS 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498501|ref|XP_003518089.1| PREDICTED: uncharacterized protein LOC100784675 [Glycine max]

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 4/146 (2%)

Query: 18  LKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWV 77
           LK DWK+  + +    S   T    GG +    I        F+++L+ K+ Q    E  
Sbjct: 51  LKGDWKEARKLLDQDGSLLKTAITKGGWATLLHIAVGANRVHFVEELL-KLMQPEELELQ 109

Query: 78  SNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            ++GN     AA  G  ++ E++ R N +LP +R    L P+H A   G ++   +L  K
Sbjct: 110 DHKGNTAFCFAAAVGNVQIAEMMERINASLPTIRGGGGLTPLHLAVLQGRKEMAWHLFPK 169

Query: 138 TTAHLDGHDWSTLLKDLINCNLFGKY 163
           T    +  DW+ L    INC   G Y
Sbjct: 170 TKEIFEEVDWTIL---FINCIKSGLY 192

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147822636|emb|CAN63937.1| hypothetical protein VITISV_038214 [Vitis vinifera]

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 31/190 (16%)

Query: 1   QKIITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPM- 59
           Q+I +     +++ + +L  DW+          S  L D        F   + +D  PM 
Sbjct: 18  QRISSSEFYYLELYKAVLNGDWE--------SASKLLADDPKS----FSAPIGTDDSPML 65

Query: 60  ------------FLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNL 107
                       F++KLV  +    L     ++G   + +AA  G  K +++L++ NP+L
Sbjct: 66  HIAVELGEARMGFVEKLVEFMPSEALA-LRDSDGATALFNAARAGNIKAVKLLVKNNPSL 124

Query: 108 PNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWST-----LLKDLINCNLFGK 162
           PN+ +   L+P+H A + GH++   YLLS T  +   + +S      LL+  +     G+
Sbjct: 125 PNICNHGYLVPLHSALRYGHKELTLYLLSVTRDNEHPYPFSNSPGSELLRRALMVGFHGE 184

Query: 163 YYSAEPYIVI 172
            Y   P   I
Sbjct: 185 LYLPSPIYFI 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472754|ref|XP_002276402.2| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera]

 Score = 55.8 bits (133), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 5/145 (3%)

Query: 18  LKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWV 77
           L  DWK  + ++ S     +  +IT        I        F+++LV  +  + L   +
Sbjct: 183 LNGDWKSAKAFLESNP-QAVRARITRRSETALHIAAGARHTRFVEELVKLMKPDDLA--L 239

Query: 78  SNE-GNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS 136
            N+ GN  +  AA  G +++ E+++  N  LP +R    + P++ AA +GH+D VRYL S
Sbjct: 240 QNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVTPLYMAALVGHKDMVRYLYS 299

Query: 137 KTTA-HLDGHDWSTLLKDLINCNLF 160
            T   +L   D   LL   I  NLF
Sbjct: 300 VTEEDNLTKEDRIGLLVAAITANLF 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
TAIR|locus:2080240	574	AT3G54070 "AT3G54070" [Arabido	0.833	0.252	0.277	3.6e-09
TAIR|locus:2165194	282	AT5G35830 [Arabidopsis thalian	0.856	0.528	0.285	1.1e-08
UNIPROTKB|E1BRU8	590	ASB15 "Uncharacterized protein	0.442	0.130	0.346	0.00011

TAIR|locus:2080240 AT3G54070 "AT3G54070" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 41/148 (27%), Positives = 73/148 (49%)

Query:    17 ILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEW 76
             +L  DWK     I  K  N + ++ITG   I   I  +     F+  L+ ++    L   
Sbjct:    58 VLTGDWKTASTLISRKECNVV-EQITGNSEIALHIAVAAKHKDFVRNLLREMDPPDLS-L 115

Query:    77 VSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS 136
              + +GN  +  AA  G  +  E+L+    +LP++ ++  + PIH AA  GH + V+YL S
Sbjct:   116 KNKDGNTPLSFAAALGDIETAEMLINMIRDLPDISNEKTMTPIHIAALYGHGEMVQYLFS 175

Query:   137 KTTAH-LDGHDWSTLLKDLINCNLFGKY 163
             KT+   L+   +  L   +I+ +++G +
Sbjct:   176 KTSIKDLNDQQYLNLFHTMISADIYGVF 203

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2165194 AT5G35830 [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 46/161 (28%), Positives = 75/161 (46%)

Query:    11 MQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKVHQ 70
             +Q+ +  LK DWK     I+ +    +  KIT        I  +     F+  L+  +  
Sbjct:    89 VQLYQAALKGDWKAANGIIIEQ-KYIIYQKITSKSETVLHIAVAAKHEGFVRNLLGSLES 147

Query:    71 NFLQEWVSN-EGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRD 129
             N L   + N +GN  +  AA  G  ++ ++L+  N +LP +R   K  PIH AA  GH +
Sbjct:   148 NDLA--LRNVDGNTALCFAAASGVVEIAKMLIEKNKDLPMIRGGGKTTPIHMAALFGHGE 205

Query:   130 TVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKYYSAEPYI 170
              V+YL  K T   + +D     ++ +N  LF    SA+ Y+
Sbjct:   206 MVKYLY-KNTRFREFND-----EEFVN--LFHAVISADIYV 238

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E1BRU8 ASB15 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
 Identities = 27/78 (34%), Positives = 46/78 (58%)

Query:    62 DKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHK 121
             D L   +H+    + ++++G++ +  AA GG    I +L+ Y  +  NV +K+ LLPIHK
Sbjct:   226 DVLEHLIHKGGDVQALADDGSSILFEAAGGGNPDCIALLLEYGGS-GNVPNKAGLLPIHK 284

Query:   122 AAQLGHRDTVRYLLSKTT 139
             AA  GH   ++YL+  T+
Sbjct:   285 AAYEGHYLVLKYLIPVTS 302


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      174       174   0.00075  109 3  11 22  0.41    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  597 (63 KB)
  Total size of DFA:  166 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.27u 0.11s 17.38t   Elapsed:  00:00:00
  Total cpu time:  17.27u 0.11s 17.38t   Elapsed:  00:00:00
  Start:  Fri May 10 22:19:25 2013   End:  Fri May 10 22:19:25 2013

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	174
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-07
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-06
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-05
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-05
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-04

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 79  NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           N+G   +  AA  G  +++++L+    +  N RDK    P+H AA+ G+ D V+ LL  
Sbjct: 38  NDGRTPLHLAAKNGHLEIVKLLLEKGAD-VNARDKDGNTPLHLAARNGNLDVVKLLLKH 95

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 77  VSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS 136
              +G   +  AA+ G  +++++L+    +  N +D     P+H AA+ GH + V+ LL 
Sbjct: 3   RDEDGRTPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLE 61

Query: 137 K 137
           K
Sbjct: 62  K 62

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 77  VSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLL 135
              +GN  +  AA  G   ++++L+++  +  N RDK    P+H AA+ GH + V+ LL
Sbjct: 69  RDKDGNTPLHLAARNGNLDVVKLLLKHGAD-VNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA  G  +++++L+ +  ++ N +DK     +H AA+ G+ + V+ LL  
Sbjct: 34  LAARNGNLEIVKLLLEHGADV-NAKDKDGNTALHLAARNGNLEIVKLLLEH 83

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA  G  +L+++L+    +   V        +H AA+ G+ + V+ LL  
Sbjct: 3   LAAKNGNLELVKLLLEKGAD---VNLGDTDTALHLAARNGNLEIVKLLLEH 50

Length = 91

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	174
KOG4412	226	consensus 26S proteasome regulatory complex, subun	100.0
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.98
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.97
PHA02791	284	ankyrin-like protein; Provisional	99.97
PHA02791	284	ankyrin-like protein; Provisional	99.96
PHA02875	413	ankyrin repeat protein; Provisional	99.96
PHA02875	413	ankyrin repeat protein; Provisional	99.95
PHA02874	434	ankyrin repeat protein; Provisional	99.95
KOG0508	615	consensus Ankyrin repeat protein [General function	99.95
PHA02859	209	ankyrin repeat protein; Provisional	99.95
PHA02878	477	ankyrin repeat protein; Provisional	99.95
PHA02874	434	ankyrin repeat protein; Provisional	99.95
PHA03100	480	ankyrin repeat protein; Provisional	99.95
PHA02878	477	ankyrin repeat protein; Provisional	99.94
KOG0510	929	consensus Ankyrin repeat protein [General function	99.94
PHA03100	480	ankyrin repeat protein; Provisional	99.94
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.94
PHA02946	446	ankyin-like protein; Provisional	99.94
PHA02859	209	ankyrin repeat protein; Provisional	99.93
PHA02989	494	ankyrin repeat protein; Provisional	99.93
KOG0514	452	consensus Ankyrin repeat protein [General function	99.93
PHA03095	471	ankyrin-like protein; Provisional	99.93
PHA02798	489	ankyrin-like protein; Provisional	99.92
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.92
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.92
PHA02795	437	ankyrin-like protein; Provisional	99.92
KOG0510	929	consensus Ankyrin repeat protein [General function	99.92
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.92
PHA02946	446	ankyin-like protein; Provisional	99.92
PHA02876	682	ankyrin repeat protein; Provisional	99.92
KOG0508	615	consensus Ankyrin repeat protein [General function	99.92
PHA03095	471	ankyrin-like protein; Provisional	99.91
PHA02917	661	ankyrin-like protein; Provisional	99.91
PHA02743	166	Viral ankyrin protein; Provisional	99.91
PHA02876	682	ankyrin repeat protein; Provisional	99.9
PHA02798	489	ankyrin-like protein; Provisional	99.9
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.9
PHA02741	169	hypothetical protein; Provisional	99.9
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.9
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.89
PHA02741	169	hypothetical protein; Provisional	99.89
PHA02736	154	Viral ankyrin protein; Provisional	99.88
PHA02884	300	ankyrin repeat protein; Provisional	99.88
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.88
PHA02989	494	ankyrin repeat protein; Provisional	99.88
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.87
PHA02743	166	Viral ankyrin protein; Provisional	99.86
PHA02884	300	ankyrin repeat protein; Provisional	99.86
PHA02795	437	ankyrin-like protein; Provisional	99.85
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.84
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.83
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.82
PHA02736	154	Viral ankyrin protein; Provisional	99.82
PHA02917	661	ankyrin-like protein; Provisional	99.82
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.81
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.81
PHA02730	672	ankyrin-like protein; Provisional	99.81
PHA02730	672	ankyrin-like protein; Provisional	99.81
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.81
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.8
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.8
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.8
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.8
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.79
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.76
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.76
KOG0514	452	consensus Ankyrin repeat protein [General function	99.76
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.75
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.75
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.75
PHA02792	631	ankyrin-like protein; Provisional	99.74
PHA02792	631	ankyrin-like protein; Provisional	99.72
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.68
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.67
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.67
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.66
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.65
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.6
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.59
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.59
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.57
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.56
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.54
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.54
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.53
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.5
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.49
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.47
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	99.37
KOG0783	1267	consensus Uncharacterized conserved protein, conta	99.07
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	99.01
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.98
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.98
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.94
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.93
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.88
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.87
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.84
PF13606	30	Ank_3: Ankyrin repeat	98.81
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.8
PF13606	30	Ank_3: Ankyrin repeat	98.74
KOG0522	560	consensus Ankyrin repeat protein [General function	98.71
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	98.67
KOG0522	560	consensus Ankyrin repeat protein [General function	98.65
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.65
KOG0511	516	consensus Ankyrin repeat protein [General function	98.5
KOG2384	223	consensus Major histocompatibility complex protein	98.33
KOG0521	785	consensus Putative GTPase activating proteins (GAP	98.31
KOG0520	975	consensus Uncharacterized conserved protein, conta	98.28
KOG0511	516	consensus Ankyrin repeat protein [General function	98.21
KOG0520	975	consensus Uncharacterized conserved protein, conta	98.16
KOG0521	785	consensus Putative GTPase activating proteins (GAP	98.11
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	97.96
KOG2384	223	consensus Major histocompatibility complex protein	97.77
KOG2505	591	consensus Ankyrin repeat protein [General function	97.25
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	97.16
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.9
KOG2505	591	consensus Ankyrin repeat protein [General function	96.7
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	95.93
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	95.09
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	95.09
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	95.04
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	93.98
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	91.53

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=7.8e-34  Score=184.71  Aligned_cols=152  Identities=16%  Similarity=0.183  Sum_probs=132.9

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhc-cchhhhhhhcccCCch
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSK-VHQNFLQEWVSNEGNA   83 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~-~~~~~~~~~~d~~g~~   83 (174)
                      |-+|++|||+||..|+.+++.+|++.. ...++.. |..| ||||+|+. .|+-++|+.|+.. +  ++++ ..+..|.|
T Consensus        35 dqD~Rt~LHwa~S~g~~eiv~fLlsq~-nv~~ddk-DdaGWtPlhia~s-~g~~evVk~Ll~r~~--advn-a~tn~G~T  108 (226)
T KOG4412|consen   35 DQDGRTPLHWACSFGHVEIVYFLLSQP-NVKPDDK-DDAGWTPLHIAAS-NGNDEVVKELLNRSG--ADVN-ATTNGGQT  108 (226)
T ss_pred             cccCCceeeeeeecCchhHHHHHHhcC-CCCCCCc-cccCCchhhhhhh-cCcHHHHHHHhcCCC--CCcc-eecCCCcc
Confidence            448999999999999999999999654 5777766 6667 99999999 9999999999998 5  7777 88889999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGK  162 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~  162 (174)
                      |||+|+..|..++.++|+++|+. ++.+|..|.||||.|+..|..+++++|+..++ .+.+|+.|+||||.|+--|+.++
T Consensus       109 ~LHyAagK~r~eIaqlLle~ga~-i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~  187 (226)
T KOG4412|consen  109 CLHYAAGKGRLEIAQLLLEKGAL-IRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDV  187 (226)
T ss_pred             eehhhhcCChhhHHHHHHhcCCC-CcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchH
Confidence            99999999999999999999987 59999999999999999999999999999998 77799999999999977777666


Q ss_pred             cc
Q 036069          163 YY  164 (174)
Q Consensus       163 ~~  164 (174)
                      +.
T Consensus       188 a~  189 (226)
T KOG4412|consen  188 AV  189 (226)
T ss_pred             HH
Confidence            53

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.98  E-value=8e-32  Score=175.35  Aligned_cols=143  Identities=20%  Similarity=0.218  Sum_probs=132.3

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      |..|++|||+|+..|+.++|+.|+.+. .+++|.. +.+| |+||||+. .|..+++++|++++  +.+. .+|..|.||
T Consensus        69 DdaGWtPlhia~s~g~~evVk~Ll~r~-~advna~-tn~G~T~LHyAag-K~r~eIaqlLle~g--a~i~-~kD~~~qtp  142 (226)
T KOG4412|consen   69 DDAGWTPLHIAASNGNDEVVKELLNRS-GADVNAT-TNGGQTCLHYAAG-KGRLEIAQLLLEKG--ALIR-IKDKQGQTP  142 (226)
T ss_pred             cccCCchhhhhhhcCcHHHHHHHhcCC-CCCccee-cCCCcceehhhhc-CChhhHHHHHHhcC--CCCc-ccccccCch
Confidence            445999999999999999999999993 4999966 8888 99999999 99999999999999  8898 999999999


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHH
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLIN  156 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~  156 (174)
                      ||-||..|+.+++++|+..++. ++.+|..|+||||.|...|+.+...+|+..|+ .+..|+.| |++..++.
T Consensus       143 lHRAAavGklkvie~Li~~~a~-~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  143 LHRAAAVGKLKVIEYLISQGAP-LNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIACN  213 (226)
T ss_pred             hHHHHhccchhhHHHHHhcCCC-CCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHHH
Confidence            9999999999999999999998 59999999999999999999999999999999 67788888 99877653

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.97  E-value=3.5e-30  Score=194.68  Aligned_cols=153  Identities=17%  Similarity=0.066  Sum_probs=141.7

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .|.+|.++||+|+.+++++++|+|+++|  +++|...-..+ ||||||++ .|+..++++|+++|  +++. .+|..|.+
T Consensus        74 ~D~~g~tlLHWAAiNNrl~v~r~li~~g--advn~~gG~l~stPLHWAar-~G~~~vv~lLlqhG--Adpt-~~D~~G~~  147 (600)
T KOG0509|consen   74 PDREGVTLLHWAAINNRLDVARYLISHG--ADVNAIGGVLGSTPLHWAAR-NGHISVVDLLLQHG--ADPT-LKDKQGLT  147 (600)
T ss_pred             CCcCCccceeHHHHcCcHHHHHHHHHcC--CCccccCCCCCCCcchHHHH-cCcHHHHHHHHHcC--CCCc-eecCCCCc
Confidence            4668999999999999999999999999  99997754667 99999999 99999999999999  8888 99999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-Ccc-cCCCCcchHHHHHHcCccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHL-DGHDWSTLLKDLINCNLFG  161 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~-~~~~g~t~l~~a~~~~~~~  161 (174)
                      |+|.|+..|+...+-+|+.++++ ++.+|..|+||||+|+.+|+...++.|+..++ ... ++..|.||||+|+..|+..
T Consensus       148 ~lHla~~~~~~~~vayll~~~~d-~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~  226 (600)
T KOG0509|consen  148 PLHLAAQFGHTALVAYLLSKGAD-IDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLT  226 (600)
T ss_pred             HHHHHHHhCchHHHHHHHHhccc-CCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcc
Confidence            99999999999999999999988 69999999999999999999888999999998 555 5599999999999999987


Q ss_pred             ccc
Q 036069          162 KYY  164 (174)
Q Consensus       162 ~~~  164 (174)
                      ++.
T Consensus       227 ~v~  229 (600)
T KOG0509|consen  227 AVK  229 (600)
T ss_pred             eEe
Confidence            764

>PHA02791 ankyrin-like protein; Provisional

Probab=99.97  E-value=1.5e-29  Score=182.00  Aligned_cols=150  Identities=12%  Similarity=0.041  Sum_probs=108.7

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .|.+|.||||.|+..|+.++++.|++.+  ++++..   .+ ||||+|+. .|+.+++++|++.+  ++++ .+|..|.|
T Consensus        26 ~D~~G~TpLh~Aa~~g~~eiv~~Ll~~g--a~~n~~---d~~TpLh~Aa~-~g~~eiV~lLL~~G--advn-~~d~~G~T   96 (284)
T PHA02791         26 ADVHGHSALYYAIADNNVRLVCTLLNAG--ALKNLL---ENEFPLHQAAT-LEDTKIVKILLFSG--MDDS-QFDDKGNT   96 (284)
T ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHCc--CCCcCC---CCCCHHHHHHH-CCCHHHHHHHHHCC--CCCC-CCCCCCCC
Confidence            4566888888888888888888888877  666533   24 88888888 88888888888777  6666 77777888


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCc-cHHHHHHhcCChHHHHHHHhcCCCcccCCCCcchHHHHHHcCcccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKL-LPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGK  162 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~g~t~l~~a~~~~~~~~  162 (174)
                      |||+|+..|+.+++++|++.+++ ++.++..|+ ||||+|+..|+.+++++|+++++.......|.||||+|+..|+.++
T Consensus        97 pLh~Aa~~g~~eivk~Ll~~gad-in~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~ei  175 (284)
T PHA02791         97 ALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDM  175 (284)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCC-cCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHH
Confidence            88888888888888888887777 366666664 6777777777777777777765422211246777777777777766


Q ss_pred             cc
Q 036069          163 YY  164 (174)
Q Consensus       163 ~~  164 (174)
                      +.
T Consensus       176 v~  177 (284)
T PHA02791        176 MI  177 (284)
T ss_pred             HH
Confidence            53

>PHA02791 ankyrin-like protein; Provisional

Probab=99.96  E-value=1.1e-28  Score=177.57  Aligned_cols=147  Identities=16%  Similarity=0.095  Sum_probs=132.0

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCC-chHH
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEG-NACM   85 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g-~~~l   85 (174)
                      ++.||||.|+..|+.++++.|++.|  ++++.+ +..| ||||+|+. .|+.+++++|++.+  ++++ .++..| .|||
T Consensus        60 d~~TpLh~Aa~~g~~eiV~lLL~~G--advn~~-d~~G~TpLh~Aa~-~g~~eivk~Ll~~g--adin-~~~~~g~~TpL  132 (284)
T PHA02791         60 ENEFPLHQAATLEDTKIVKILLFSG--MDDSQF-DDKGNTALYYAVD-SGNMQTVKLFVKKN--WRLM-FYGKTGWKTSF  132 (284)
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHCC--CCCCCC-CCCCCCHHHHHHH-cCCHHHHHHHHHCC--CCcC-ccCCCCCcHHH
Confidence            5789999999999999999999999  899866 8888 99999999 99999999999999  8887 888887 4999


Q ss_pred             HHHHhcCCHHHHHHHHHhCCCCCCCCC-CCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcch-HHHHHHcCcccc
Q 036069           86 VHAATGGKSKLIEILMRYNPNLPNVRD-KSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTL-LKDLINCNLFGK  162 (174)
Q Consensus        86 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~-l~~a~~~~~~~~  162 (174)
                      |+|+..|+.+++++|++.++..   .| ..|.||||+|+..|+.+++++|+++|+ .+.++..|.|| ||.|+..|+.++
T Consensus       133 ~~Aa~~g~~eivk~LL~~~~~~---~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~  209 (284)
T PHA02791        133 YHAVMLNDVSIVSYFLSEIPST---FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEM  209 (284)
T ss_pred             HHHHHcCCHHHHHHHHhcCCcc---cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHH
Confidence            9999999999999999987652   23 258999999999999999999999999 67788888877 999999999887


Q ss_pred             cc
Q 036069          163 YY  164 (174)
Q Consensus       163 ~~  164 (174)
                      +-
T Consensus       210 v~  211 (284)
T PHA02791        210 LQ  211 (284)
T ss_pred             HH
Confidence            74

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.96  E-value=3.5e-28  Score=184.84  Aligned_cols=151  Identities=13%  Similarity=0.154  Sum_probs=107.1

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      +.+|.||||.|+..|+.++++.|++.|  +.++.. +..+ ||||.|+. .|+.+++++|++.+  .......+..|.||
T Consensus        32 ~~~g~tpL~~A~~~~~~~~v~~Ll~~g--a~~~~~-~~~~~t~L~~A~~-~g~~~~v~~Ll~~~--~~~~~~~~~~g~tp  105 (413)
T PHA02875         32 IYDGISPIKLAMKFRDSEAIKLLMKHG--AIPDVK-YPDIESELHDAVE-EGDVKAVEELLDLG--KFADDVFYKDGMTP  105 (413)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHhCC--CCcccc-CCCcccHHHHHHH-CCCHHHHHHHHHcC--CcccccccCCCCCH
Confidence            446788888888888888888888887  666644 4555 77777777 77777777777766  33221344567777


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|++.|+ .+.++..|.||||.|+..|+.+++
T Consensus       106 L~~A~~~~~~~iv~~Ll~~gad-~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv  184 (413)
T PHA02875        106 LHLATILKKLDIMKLLIARGAD-PDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAIC  184 (413)
T ss_pred             HHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence            7777777777777777777777 47777777777777777777777777777776 556677777777777777776654

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.95  E-value=2.9e-27  Score=179.80  Aligned_cols=152  Identities=16%  Similarity=0.055  Sum_probs=133.9

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      +.++.+|||.|+..|+.++++.|++.+  ...+...+..| ||||+|+. .|+.+++++|++.+  ++++ .++..|.||
T Consensus        65 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~g~tpL~~A~~-~~~~~iv~~Ll~~g--ad~~-~~~~~g~tp  138 (413)
T PHA02875         65 YPDIESELHDAVEEGDVKAVEELLDLG--KFADDVFYKDGMTPLHLATI-LKKLDIMKLLIARG--ADPD-IPNTDKFSP  138 (413)
T ss_pred             CCCcccHHHHHHHCCCHHHHHHHHHcC--CcccccccCCCCCHHHHHHH-hCCHHHHHHHHhCC--CCCC-CCCCCCCCH
Confidence            456889999999999999999999998  55544446677 99999999 99999999999999  8788 889999999


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCC-cchHHHHHHcCcccc
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDW-STLLKDLINCNLFGK  162 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g-~t~l~~a~~~~~~~~  162 (174)
                      ||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++.|+ .+..+..| .|+++.|+..|+.++
T Consensus       139 Lh~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~i  217 (413)
T PHA02875        139 LHLAVMMGDIKGIELLIDHKAC-LDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDI  217 (413)
T ss_pred             HHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHH
Confidence            9999999999999999999998 58999999999999999999999999999999 66655555 588999999998776


Q ss_pred             cc
Q 036069          163 YY  164 (174)
Q Consensus       163 ~~  164 (174)
                      +.
T Consensus       218 v~  219 (413)
T PHA02875        218 VR  219 (413)
T ss_pred             HH
Confidence            53

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.95  E-value=3e-27  Score=180.76  Aligned_cols=153  Identities=16%  Similarity=0.169  Sum_probs=130.7

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhcc-ch-------------
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKV-HQ-------------   70 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~-~~-------------   70 (174)
                      +.+|.||||.|+..|+.+++++|++.|  ++++.. +..+ ||||+|+. .|+.+++++|++.+ ++             
T Consensus        32 ~~~~~tpL~~A~~~g~~~iv~~Ll~~G--a~~n~~-~~~~~t~L~~A~~-~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i  107 (434)
T PHA02874         32 VDETTTPLIDAIRSGDAKIVELFIKHG--ADINHI-NTKIPHPLLTAIK-IGAHDIIKLLIDNGVDTSILPIPCIEKDMI  107 (434)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCC-CCCCCCHHHHHHH-cCCHHHHHHHHHCCCCCCcchhccCCHHHH
Confidence            456889999999999999999999999  888865 7777 99999999 99999999998876 11             


Q ss_pred             -------hhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-Ccc
Q 036069           71 -------NFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHL  142 (174)
Q Consensus        71 -------~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~  142 (174)
                             .+++ .+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++.|+ .+.
T Consensus       108 ~~ll~~g~d~n-~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad-~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~  185 (434)
T PHA02874        108 KTILDCGIDVN-IKDAELKTFLHYAIKKGDLESIKMLFEYGAD-VNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANV  185 (434)
T ss_pred             HHHHHCcCCCC-CCCCCCccHHHHHHHCCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC
Confidence                   2234 5677889999999999999999999999988 58889999999999999999999999999988 667


Q ss_pred             cCCCCcchHHHHHHcCcccccc
Q 036069          143 DGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       143 ~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      .+..|.||||.|+..|+.+++-
T Consensus       186 ~~~~g~tpL~~A~~~g~~~iv~  207 (434)
T PHA02874        186 KDNNGESPLHNAAEYGDYACIK  207 (434)
T ss_pred             CCCCCCCHHHHHHHcCCHHHHH
Confidence            8888999999999998877663

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.95  E-value=2.6e-28  Score=179.23  Aligned_cols=149  Identities=14%  Similarity=0.090  Sum_probs=139.7

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHH
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACM   85 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l   85 (174)
                      ..|.+||..|+..|++++|+.|++++  +.+|.. ...+ |||.-||. .|+++++++|++++  ++++ ..|..|.|.|
T Consensus        82 IegappLWaAsaAGHl~vVk~L~~~g--a~VN~t-T~TNStPLraACf-DG~leivKyLvE~g--ad~~-IanrhGhTcL  154 (615)
T KOG0508|consen   82 IEGAPPLWAASAAGHLEVVKLLLRRG--ASVNDT-TRTNSTPLRAACF-DGHLEIVKYLVEHG--ADPE-IANRHGHTCL  154 (615)
T ss_pred             cCCCchhhHHhccCcHHHHHHHHHhc--Cccccc-cccCCccHHHHHh-cchhHHHHHHHHcC--CCCc-ccccCCCeeE
Confidence            46899999999999999999999999  999966 6677 99999999 99999999999999  8888 9999999999


Q ss_pred             HHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCCCcccCCCCcchHHHHHHcCccccc
Q 036069           86 VHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        86 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      |+||-.|+.+++++|++.|++ ++.++..|.|+||.++..|+.|++++|++.|+....+..|.|||..|...|+-++|
T Consensus       155 mIa~ykGh~~I~qyLle~gAD-vn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~~GmtPL~~Aa~tG~~~iV  231 (615)
T KOG0508|consen  155 MIACYKGHVDIAQYLLEQGAD-VNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDGHGMTPLLLAAVTGHTDIV  231 (615)
T ss_pred             EeeeccCchHHHHHHHHhCCC-cchhcccCchHHHhhhhcccHHHHHHHHhCCceeeecCCCCchHHHHhhhcchHHH
Confidence            999999999999999999999 59999999999999999999999999999999555666799999999999998776

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.95  E-value=8.3e-27  Score=161.95  Aligned_cols=147  Identities=11%  Similarity=0.006  Sum_probs=114.0

Q ss_pred             cchhhHHHHHHHHhC--CHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhC---CCHHHHHHHHhccchhhhhhhccc
Q 036069            6 DIDSVMQVTRYILKN--DWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSD---APPMFLDKLVSKVHQNFLQEWVSN   79 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g--~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~---g~~~~v~~Ll~~~~~~~~~~~~d~   79 (174)
                      +..|.||||.|+..+  +.++++.|++.|  ++++...+..| ||||+|+. .   ++.+++++|++.+  ++++ .+|.
T Consensus        48 ~~~g~TpLh~a~~~~~~~~eiv~~Ll~~g--advn~~~~~~g~TpLh~a~~-~~~~~~~eiv~~Ll~~g--adin-~~d~  121 (209)
T PHA02859         48 NDLYETPIFSCLEKDKVNVEILKFLIENG--ADVNFKTRDNNLSALHHYLS-FNKNVEPEILKILIDSG--SSIT-EEDE  121 (209)
T ss_pred             CccCCCHHHHHHHcCCCCHHHHHHHHHCC--CCCCccCCCCCCCHHHHHHH-hCccccHHHHHHHHHCC--CCCC-CcCC
Confidence            456888888888754  788888888888  88876622456 88888765 3   3678888888888  7777 8888


Q ss_pred             CCchHHHHHHh--cCCHHHHHHHHHhCCCCCCCCCCCCccHHHH-HHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHH
Q 036069           80 EGNACMVHAAT--GGKSKLIEILMRYNPNLPNVRDKSKLLPIHK-AAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLI  155 (174)
Q Consensus        80 ~g~~~l~~A~~--~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~-a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~  155 (174)
                      .|.||||.|+.  .++.+++++|++.|++ ++.+|..|.||+|. ++..++.+++++|++.|+ .+.++..|.|||++|+
T Consensus       122 ~G~TpLh~a~~~~~~~~~iv~~Li~~gad-in~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~  200 (209)
T PHA02859        122 DGKNLLHMYMCNFNVRINVIKLLIDSGVS-FLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIK  200 (209)
T ss_pred             CCCCHHHHHHHhccCCHHHHHHHHHcCCC-cccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHh
Confidence            88888888765  3578888888888888 48888888888885 455678888888888888 6667888888888888


Q ss_pred             HcCc
Q 036069          156 NCNL  159 (174)
Q Consensus       156 ~~~~  159 (174)
                      ..+.
T Consensus       201 ~~~~  204 (209)
T PHA02859        201 FRNL  204 (209)
T ss_pred             hhhh
Confidence            7654

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.95  E-value=6.2e-27  Score=180.89  Aligned_cols=149  Identities=13%  Similarity=0.214  Sum_probs=128.4

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhc------------------
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSK------------------   67 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~------------------   67 (174)
                      ..+.+|||.|+..|+.++++.|++.|  ++++.. +..| ||||+||. .|+.++++.|++.                  
T Consensus        35 ~~~~tPLh~A~~~g~~e~vk~Ll~~g--advn~~-d~~g~TpLh~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~  110 (477)
T PHA02878         35 LIPFIPLHQAVEARNLDVVKSLLTRG--HNVNQP-DHRDLTPLHIICK-EPNKLGMKEMIRSINKCSVFYTLVAIKDAFN  110 (477)
T ss_pred             ccCcchHHHHHHcCCHHHHHHHHHCC--CCCCCC-CCCCCCHHHHHHH-CccHhHHHHHHHHHhccccccchhhHHHHHH
Confidence            35789999999999999999999999  899966 8888 99999998 8776665555543                  


Q ss_pred             ----------------------------------------------cchhhhhhhcccC-CchHHHHHHhcCCHHHHHHH
Q 036069           68 ----------------------------------------------VHQNFLQEWVSNE-GNACMVHAATGGKSKLIEIL  100 (174)
Q Consensus        68 ----------------------------------------------~~~~~~~~~~d~~-g~~~l~~A~~~~~~~~~~~L  100 (174)
                                                                    +  ++++ ..+.. |.||||+|+..|+.+++++|
T Consensus       111 ~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~g--adin-~~~~~~g~tpLh~A~~~~~~~iv~~L  187 (477)
T PHA02878        111 NRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYG--ADIN-MKDRHKGNTALHYATENKDQRLTELL  187 (477)
T ss_pred             cCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcC--CCCC-ccCCCCCCCHHHHHHhCCCHHHHHHH
Confidence                                                          2  3334 45666 99999999999999999999


Q ss_pred             HHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHc-Cccccc
Q 036069          101 MRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINC-NLFGKY  163 (174)
Q Consensus       101 l~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~-~~~~~~  163 (174)
                      ++.|++ ++.+|..|.||||+|+..|+.+++++|++.|+ .+.++..|.||||+|+.. ++.+++
T Consensus       188 l~~gad-~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv  251 (477)
T PHA02878        188 LSYGAN-VNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDIL  251 (477)
T ss_pred             HHCCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHH
Confidence            999999 59999999999999999999999999999999 777899999999999975 566655

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.95  E-value=2.1e-26  Score=176.09  Aligned_cols=147  Identities=14%  Similarity=0.136  Sum_probs=125.2

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+..|.||||.|+..|+.+++++|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+  ++++ ..+..|.|
T Consensus       120 ~~~~g~T~Lh~A~~~~~~~~v~~Ll~~g--ad~n~~-d~~g~tpLh~A~~-~~~~~iv~~Ll~~g--~~~n-~~~~~g~t  192 (434)
T PHA02874        120 KDAELKTFLHYAIKKGDLESIKMLFEYG--ADVNIE-DDNGCYPIHIAIK-HNFFDIIKLLLEKG--AYAN-VKDNNGES  192 (434)
T ss_pred             CCCCCccHHHHHHHCCCHHHHHHHHhCC--CCCCCc-CCCCCCHHHHHHH-CCcHHHHHHHHHCC--CCCC-CCCCCCCC
Confidence            3567999999999999999999999999  888866 7788 99999999 99999999999998  7777 88889999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCC------------------------------CCCCCCCCccHHHHHHhcC-ChHHHH
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNL------------------------------PNVRDKSKLLPIHKAAQLG-HRDTVR  132 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~------------------------------~~~~~~~~~tpl~~a~~~~-~~~~~~  132 (174)
                      |||+|+..|+.+++++|++.++++                              ++.+|..|+||||+|+..+ +.++++
T Consensus       193 pL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~  272 (434)
T PHA02874        193 PLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIID  272 (434)
T ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHH
Confidence            999999999999999999987652                              3455667778888888765 678888


Q ss_pred             HHHhcCC-CcccCCCCcchHHHHHHcC
Q 036069          133 YLLSKTT-AHLDGHDWSTLLKDLINCN  158 (174)
Q Consensus       133 ~ll~~~~-~~~~~~~g~t~l~~a~~~~  158 (174)
                      +|++.|+ .+.++..|.|||+.|+..+
T Consensus       273 ~Ll~~gad~n~~d~~g~TpL~~A~~~~  299 (434)
T PHA02874        273 ILLYHKADISIKDNKGENPIDTAFKYI  299 (434)
T ss_pred             HHHHCcCCCCCCCCCCCCHHHHHHHhC
Confidence            8888888 6678888888888888776

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.95  E-value=1.3e-26  Score=179.26  Aligned_cols=150  Identities=19%  Similarity=0.139  Sum_probs=107.0

Q ss_pred             cchhhHHHHHHHHhC--CHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCC-
Q 036069            6 DIDSVMQVTRYILKN--DWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEG-   81 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g--~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g-   81 (174)
                      +..|.+|||.|+..|  +.++++.|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+  +++. ..+..| 
T Consensus       138 ~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g--~din~~-d~~g~tpL~~A~~-~~~~~iv~~Ll~~g--a~~~-~~~~~~~  210 (480)
T PHA03100        138 NSDGENLLHLYLESNKIDLKILKLLIDKG--VDINAK-NRYGYTPLHIAVE-KGNIDVIKFLLDNG--ADIN-AGDIETL  210 (480)
T ss_pred             CCCCCcHHHHHHHcCCChHHHHHHHHHCC--CCcccc-cCCCCCHHHHHHH-hCCHHHHHHHHHcC--CCcc-CCCCCCC
Confidence            445667777777776  667777777776  666644 5555 77777777 67777777777766  5555 555555 


Q ss_pred             -----chHHHHHHhcCC--HHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHH
Q 036069           82 -----NACMVHAATGGK--SKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKD  153 (174)
Q Consensus        82 -----~~~l~~A~~~~~--~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~  153 (174)
                           .+|+|.|+..++  .+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++.|+ .+..+..|.||++.
T Consensus       211 ~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~d-in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~  289 (480)
T PHA03100        211 LFTIFETPLHIAACYNEITLEVVNYLLSYGVP-INIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHI  289 (480)
T ss_pred             cHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence                 677777777777  7777777777776 47777778888888888888888888888887 56677788888888


Q ss_pred             HHHcCccccc
Q 036069          154 LINCNLFGKY  163 (174)
Q Consensus       154 a~~~~~~~~~  163 (174)
                      |+..++.+++
T Consensus       290 A~~~~~~~iv  299 (480)
T PHA03100        290 AILNNNKEIF  299 (480)
T ss_pred             HHHhCCHHHH
Confidence            8877776655

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.94  E-value=4e-26  Score=176.41  Aligned_cols=140  Identities=11%  Similarity=0.019  Sum_probs=129.4

Q ss_pred             hhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHH
Q 036069            9 SVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVH   87 (174)
Q Consensus         9 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~   87 (174)
                      |.||||.|+..|+.++++.|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+  ++++ .+|..|.||||+
T Consensus       168 g~tpLh~A~~~~~~~iv~~Ll~~g--ad~n~~-d~~g~tpLh~A~~-~~~~~iv~~Ll~~g--a~in-~~d~~g~TpLh~  240 (477)
T PHA02878        168 GNTALHYATENKDQRLTELLLSYG--ANVNIP-DKTNNSPLHHAVK-HYNKPIVHILLENG--ASTD-ARDKCGNTPLHI  240 (477)
T ss_pred             CCCHHHHHHhCCCHHHHHHHHHCC--CCCCCc-CCCCCCHHHHHHH-hCCHHHHHHHHHcC--CCCC-CCCCCCCCHHHH
Confidence            999999999999999999999999  899866 8888 99999999 99999999999999  8888 999999999999


Q ss_pred             HHhc-CCHHHHHHHHHhCCCCCCCCCC-CCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcC
Q 036069           88 AATG-GKSKLIEILMRYNPNLPNVRDK-SKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCN  158 (174)
Q Consensus        88 A~~~-~~~~~~~~Ll~~~~~~~~~~~~-~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~  158 (174)
                      |+.. ++.+++++|++.|++ ++.++. .|.||||+|  .++.+++++|+++|+ .+..+..|.|||+.|+..+
T Consensus       241 A~~~~~~~~iv~~Ll~~gad-vn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~  311 (477)
T PHA02878        241 SVGYCKDYDILKLLLEHGVD-VNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQY  311 (477)
T ss_pred             HHHhcCCHHHHHHHHHcCCC-CCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHc
Confidence            9975 789999999999999 587775 799999999  567899999999999 7789999999999999754

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.94  E-value=1.5e-26  Score=179.11  Aligned_cols=154  Identities=18%  Similarity=0.166  Sum_probs=132.5

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCcccccc-------------ccCCc-cHHHHHHhhCCCHHHHHHHHhccch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDK-------------ITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQ   70 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~-------------~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~   70 (174)
                      .+..+.+|||.|+..|++++++.+|+.+ +..-+.+             .|..| ||||+|++ .|+.++++.|+..+  
T Consensus       221 ~~n~~~~pLhlAve~g~~e~lk~~L~n~-~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r-~G~~~svd~Ll~~G--  296 (929)
T KOG0510|consen  221 DNNEKATPLHLAVEGGDIEMLKMCLQNG-KKIADVQLDAMQQEKELVNDEDNDGCTPLHYAAR-QGGPESVDNLLGFG--  296 (929)
T ss_pred             ccCCCCcchhhhhhcCCHHHHHHHHhCc-cccchhhhHHHHHHHHHhhcccccCCchHHHHHH-cCChhHHHHHHHcC--
Confidence            4567899999999999999999999887 3332222             25567 99999999 99999999999999  


Q ss_pred             hhhhhhcccCCchHHHHHHhcCCHHHHHHHHH-hCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCCCcc----cCC
Q 036069           71 NFLQEWVSNEGNACMVHAATGGKSKLIEILMR-YNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHL----DGH  145 (174)
Q Consensus        71 ~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~----~~~  145 (174)
                      ++++ .++.++.||||.||++|+.++++-|++ .+..+.+..|..|.||+|.|+..||..++++|++.|+...    .|.
T Consensus       297 a~I~-~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~  375 (929)
T KOG0510|consen  297 ASIN-SKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADS  375 (929)
T ss_pred             Cccc-ccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhccccccc
Confidence            9999 999999999999999999999999999 6666678889999999999999999999999999999333    488


Q ss_pred             CCcchHHHHHHcCccccc
Q 036069          146 DWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       146 ~g~t~l~~a~~~~~~~~~  163 (174)
                      +|.|+||.|+..|+...+
T Consensus       376 dg~TaLH~Aa~~g~~~av  393 (929)
T KOG0510|consen  376 DGNTALHLAAKYGNTSAV  393 (929)
T ss_pred             CCchhhhHHHHhccHHHH
Confidence            999999999999985544

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.94  E-value=3.6e-26  Score=176.81  Aligned_cols=151  Identities=10%  Similarity=0.026  Sum_probs=139.4

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHH-----HHhhCCCHHHHHHHHhccchhhhhhhccc
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDL-----IVNSDAPPMFLDKLVSKVHQNFLQEWVSN   79 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~-----A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~   79 (174)
                      +..+.+|||.|+..|+.++++.|++.|  ++++.. +..+ +|||+     |+. .++.+++++|++.+  ++++ ..|.
T Consensus        32 ~~~~~t~L~~A~~~~~~~ivk~Ll~~g--~~~~~~-~~~~~t~L~~~~~~~a~~-~~~~~iv~~Ll~~g--a~i~-~~d~  104 (480)
T PHA03100         32 YKKPVLPLYLAKEARNIDVVKILLDNG--ADINSS-TKNNSTPLHYLSNIKYNL-TDVKEIVKLLLEYG--ANVN-APDN  104 (480)
T ss_pred             hcccchhhhhhhccCCHHHHHHHHHcC--CCCCCc-cccCcCHHHHHHHHHHHh-hchHHHHHHHHHCC--CCCC-CCCC
Confidence            457899999999999999999999999  888866 7777 99999     999 99999999999999  7777 8999


Q ss_pred             CCchHHHHHH--hcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcC--ChHHHHHHHhcCC-CcccCCCCcchHHHH
Q 036069           80 EGNACMVHAA--TGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLG--HRDTVRYLLSKTT-AHLDGHDWSTLLKDL  154 (174)
Q Consensus        80 ~g~~~l~~A~--~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~--~~~~~~~ll~~~~-~~~~~~~g~t~l~~a  154 (174)
                      .|.||||+|+  ..|+.+++++|++.|++ ++..+..|.||||+|+..|  +.+++++|++.|+ .+.++..|.||||.|
T Consensus       105 ~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A  183 (480)
T PHA03100        105 NGITPLLYAISKKSNSYSIVEYLLDNGAN-VNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIA  183 (480)
T ss_pred             CCCchhhHHHhcccChHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHH
Confidence            9999999999  99999999999999998 5899999999999999999  9999999999999 677788999999999


Q ss_pred             HHcCcccccc
Q 036069          155 INCNLFGKYY  164 (174)
Q Consensus       155 ~~~~~~~~~~  164 (174)
                      +..|+.+++-
T Consensus       184 ~~~~~~~iv~  193 (480)
T PHA03100        184 VEKGNIDVIK  193 (480)
T ss_pred             HHhCCHHHHH
Confidence            9999877663

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.94  E-value=4e-26  Score=172.85  Aligned_cols=144  Identities=20%  Similarity=0.257  Sum_probs=133.9

Q ss_pred             hHHHHHHHHhCCHHHHHHHHHc-CCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcc-cCCchHHH
Q 036069           10 VMQVTRYILKNDWKDLEEYIMS-KTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVS-NEGNACMV   86 (174)
Q Consensus        10 ~~~L~~A~~~g~~~~~~~ll~~-~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d-~~g~~~l~   86 (174)
                      ...+..|+..|+++.++.+++. +  ..++.. |..| ++||||+. .++.+++++|++++  ++++ ..+ ..+.||||
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g--~~v~~~-D~~g~tlLHWAAi-NNrl~v~r~li~~g--advn-~~gG~l~stPLH  117 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEG--ESVNNP-DREGVTLLHWAAI-NNRLDVARYLISHG--ADVN-AIGGVLGSTPLH  117 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcC--cCCCCC-CcCCccceeHHHH-cCcHHHHHHHHHcC--CCcc-ccCCCCCCCcch
Confidence            4568899999999999999999 6  888866 8888 99999999 99999999999999  8888 777 55889999


Q ss_pred             HHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccc
Q 036069           87 HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFG  161 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~  161 (174)
                      +|+++|+..++.+|+++|++ ++.+|.+|.+|+|.|++.|+.-.+-||+..++ .+.+|.+|.|||++|+..|+..
T Consensus       118 WAar~G~~~vv~lLlqhGAd-pt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~  192 (600)
T KOG0509|consen  118 WAARNGHISVVDLLLQHGAD-PTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFAL  192 (600)
T ss_pred             HHHHcCcHHHHHHHHHcCCC-CceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccH
Confidence            99999999999999999999 69999999999999999999999999999999 8889999999999999988754

>PHA02946 ankyin-like protein; Provisional

Probab=99.94  E-value=1.2e-25  Score=171.80  Aligned_cols=144  Identities=15%  Similarity=0.081  Sum_probs=89.5

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCC--HHHHHHHHhccchhhhhhh-cccC
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAP--PMFLDKLVSKVHQNFLQEW-VSNE   80 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~--~~~v~~Ll~~~~~~~~~~~-~d~~   80 (174)
                      .|.+|.||||+|+..|+.++++.|++.|  ++++.+ +..| ||||+|+. .++  .+++++|++++  ++++ . .|..
T Consensus        68 ~d~~G~TpLh~Aa~~g~~eiv~lLL~~G--Adin~~-d~~g~TpLh~A~~-~~~~~~e~v~lLl~~G--adin-~~~d~~  140 (446)
T PHA02946         68 TDDDGNYPLHIASKINNNRIVAMLLTHG--ADPNAC-DKQHKTPLYYLSG-TDDEVIERINLLVQYG--AKIN-NSVDEE  140 (446)
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHCc--CCCCCC-CCCCCCHHHHHHH-cCCchHHHHHHHHHcC--CCcc-cccCCC
Confidence            4667999999999999999999999999  999866 8888 99999887 654  78888998887  5544 2 3444


Q ss_pred             CchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcC--ChHHHHHHHhcCC-CcccCCCCcchHHHHHHc
Q 036069           81 GNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLG--HRDTVRYLLSKTT-AHLDGHDWSTLLKDLINC  157 (174)
Q Consensus        81 g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~--~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~  157 (174)
                      |.|||| ||..++.+++++|++.|++ ++.+|..|+||||+|+..+  +.+++++|++.|+ .+.++.+|.||||+|+..
T Consensus       141 g~tpL~-aa~~~~~~vv~~Ll~~gad-~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~  218 (446)
T PHA02946        141 GCGPLL-ACTDPSERVFKKIMSIGFE-ARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSK  218 (446)
T ss_pred             CCcHHH-HHHCCChHHHHHHHhcccc-ccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence            555554 3333444444444444444 2444444444444444322  2344444444444 333444444444444443

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.93  E-value=5.1e-25  Score=153.02  Aligned_cols=146  Identities=10%  Similarity=0.077  Sum_probs=124.5

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCC--CHHHHHHHHhccchhhhhhhcc-cCCc
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDA--PPMFLDKLVSKVHQNFLQEWVS-NEGN   82 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g--~~~~v~~Ll~~~~~~~~~~~~d-~~g~   82 (174)
                      .++.+||+.|+..|+.+.++.|++..  .    ..+..| ||||+|+. .+  +.+++++|++.+  ++++ .++ ..|.
T Consensus        19 ~~~~~pL~~A~~~~~~~~vk~Li~~~--n----~~~~~g~TpLh~a~~-~~~~~~eiv~~Ll~~g--advn-~~~~~~g~   88 (209)
T PHA02859         19 YRYCNPLFYYVEKDDIEGVKKWIKFV--N----DCNDLYETPIFSCLE-KDKVNVEILKFLIENG--ADVN-FKTRDNNL   88 (209)
T ss_pred             hccCcHHHHHHHhCcHHHHHHHHHhh--h----ccCccCCCHHHHHHH-cCCCCHHHHHHHHHCC--CCCC-ccCCCCCC
Confidence            35789999999999999999999765  2    226678 99999997 65  899999999999  8888 776 4799


Q ss_pred             hHHHHHHhc---CCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHh--cCChHHHHHHHhcCC-CcccCCCCcchHHH-HH
Q 036069           83 ACMVHAATG---GKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQ--LGHRDTVRYLLSKTT-AHLDGHDWSTLLKD-LI  155 (174)
Q Consensus        83 ~~l~~A~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~--~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~-a~  155 (174)
                      ||||+|+..   ++.+++++|+++|++ ++.+|..|.||||+|+.  .++.+++++|++.|+ .+.++.+|.||||. +.
T Consensus        89 TpLh~a~~~~~~~~~eiv~~Ll~~gad-in~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~  167 (209)
T PHA02859         89 SALHHYLSFNKNVEPEILKILIDSGSS-ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYIL  167 (209)
T ss_pred             CHHHHHHHhCccccHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHH
Confidence            999998754   479999999999999 59999999999999876  468999999999998 66789999999996 45


Q ss_pred             HcCccccc
Q 036069          156 NCNLFGKY  163 (174)
Q Consensus       156 ~~~~~~~~  163 (174)
                      ..++.+++
T Consensus       168 ~~~~~~iv  175 (209)
T PHA02859        168 FHSDKKIF  175 (209)
T ss_pred             hcCCHHHH
Confidence            56665554

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.93  E-value=4.1e-25  Score=171.42  Aligned_cols=153  Identities=18%  Similarity=0.142  Sum_probs=128.5

Q ss_pred             ccchhhHHHHHHHHh---CCHHHHHHHHHcCCCccc-cccccCCc-cHHHHHHhh-CCCHHHHHHHHhccchhhhhhh-c
Q 036069            5 TDIDSVMQVTRYILK---NDWKDLEEYIMSKTSNTL-TDKITGGL-SIFDLIVNS-DAPPMFLDKLVSKVHQNFLQEW-V   77 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~---g~~~~~~~ll~~~~~~~~-~~~~~~~~-t~L~~A~~~-~g~~~~v~~Ll~~~~~~~~~~~-~   77 (174)
                      .+..|.||||.|+..   |+.++++.|++.|  +++ +.. +..| ||||+|+.+ .++.+++++|++++  ++++ . .
T Consensus       104 ~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~G--adin~~~-d~~g~tpLh~a~~~~~~~~~iv~~Ll~~G--adi~-~~~  177 (494)
T PHA02989        104 KTFNGVSPIVCFIYNSNINNCDMLRFLLSKG--INVNDVK-NSRGYNLLHMYLESFSVKKDVIKILLSFG--VNLF-EKT  177 (494)
T ss_pred             CCCCCCcHHHHHHHhcccCcHHHHHHHHHCC--CCccccc-CCCCCCHHHHHHHhccCCHHHHHHHHHcC--CCcc-ccc
Confidence            456799999988765   6789999999999  898 545 7788 999998751 35789999999999  7777 6 5


Q ss_pred             ccCCchHHHHHHhc----CCHHHHHHHHHhCCCC-------------------------------------CCCCCCCCc
Q 036069           78 SNEGNACMVHAATG----GKSKLIEILMRYNPNL-------------------------------------PNVRDKSKL  116 (174)
Q Consensus        78 d~~g~~~l~~A~~~----~~~~~~~~Ll~~~~~~-------------------------------------~~~~~~~~~  116 (174)
                      +..|.||||+|+..    ++.+++++|++.|+++                                     ++.+|..|+
T Consensus       178 ~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~  257 (494)
T PHA02989        178 SLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGF  257 (494)
T ss_pred             cccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCC
Confidence            67899999998765    4889999999887753                                     134566799


Q ss_pred             cHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069          117 LPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       117 tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ||||+|+..|+.+++++|++.|+ .+.++..|.|||+.|+..|+.+++
T Consensus       258 TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv  305 (494)
T PHA02989        258 NPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDML  305 (494)
T ss_pred             CHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence            99999999999999999999999 777999999999999999998766

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.93  E-value=3.6e-26  Score=163.25  Aligned_cols=160  Identities=14%  Similarity=0.163  Sum_probs=139.5

Q ss_pred             cccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHh----hCCCHHHHHHHHhccchhhhhhhcc
Q 036069            4 ITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVN----SDAPPMFLDKLVSKVHQNFLQEWVS   78 (174)
Q Consensus         4 ~~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~----~~g~~~~v~~Ll~~~~~~~~~~~~d   78 (174)
                      +-|.+|+|+||+++..+++++|+.||+.| -++++.+ +..| ||+++++.    ...+.++|.-|...+   +++ .+.
T Consensus       263 laDsNGNTALHYsVSHaNF~VV~~LLDSg-vC~VD~q-NrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg---nVN-aKA  336 (452)
T KOG0514|consen  263 LADSNGNTALHYAVSHANFDVVSILLDSG-VCDVDQQ-NRAGYTPVMLAALAKLKQPADRTVVERLFKMG---DVN-AKA  336 (452)
T ss_pred             hhcCCCCeeeeeeecccchHHHHHHhccC-ccccccc-ccccccHHHHHHHHhhcchhhHHHHHHHHhcc---Ccc-hhh
Confidence            45778999999999999999999999999 9999977 9999 99998764    123467888888875   455 555


Q ss_pred             -cCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC--CcccCCCCcchHHHHH
Q 036069           79 -NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT--AHLDGHDWSTLLKDLI  155 (174)
Q Consensus        79 -~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~--~~~~~~~g~t~l~~a~  155 (174)
                       ..|.|+|++|+..|+.++++.|+..|++ +|++|.+|-|+|+.|+.+||.|++++|+....  ..+.|.+|.|+|.+|.
T Consensus       337 sQ~gQTALMLAVSHGr~d~vk~LLacgAd-VNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAl  415 (452)
T KOG0514|consen  337 SQHGQTALMLAVSHGRVDMVKALLACGAD-VNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIAL  415 (452)
T ss_pred             hhhcchhhhhhhhcCcHHHHHHHHHccCC-CccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHH
Confidence             4599999999999999999999999999 59999999999999999999999999999877  4459999999999999


Q ss_pred             HcCccccccccccee
Q 036069          156 NCNLFGKYYSAEPYI  170 (174)
Q Consensus       156 ~~~~~~~~~~~~~~~  170 (174)
                      ..|+.||+..+..+.
T Consensus       416 eagh~eIa~mlYa~~  430 (452)
T KOG0514|consen  416 EAGHREIAVMLYAHM  430 (452)
T ss_pred             hcCchHHHHHHHHHH
Confidence            999999886655443

>PHA03095 ankyrin-like protein; Provisional

Probab=99.93  E-value=1.2e-24  Score=167.91  Aligned_cols=104  Identities=19%  Similarity=0.125  Sum_probs=84.2

Q ss_pred             CHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCH--HHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHH
Q 036069           57 PPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKS--KLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYL  134 (174)
Q Consensus        57 ~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~--~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~l  134 (174)
                      +.++++.|++.+  .+++ .+|..|.||||+|+..|+.  .+++.|+..|.+ ++.+|..|+||||+|+..|+.+++++|
T Consensus       201 ~~~i~~~Ll~~g--~~~~-~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~d-in~~d~~g~TpLh~A~~~~~~~~v~~L  276 (471)
T PHA03095        201 RARIVRELIRAG--CDPA-ATDMLGNTPLHSMATGSSCKRSLVLPLLIAGIS-INARNRYGQTPLHYAAVFNNPRACRRL  276 (471)
T ss_pred             cHHHHHHHHHcC--CCCc-ccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence            344455555554  4444 6677788888888877764  567788888888 599999999999999999999999999


Q ss_pred             HhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          135 LSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       135 l~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      ++.|+ .+..+.+|.|||+.|+..|+.+++.
T Consensus       277 L~~gad~n~~~~~g~tpl~~A~~~~~~~~v~  307 (471)
T PHA03095        277 IALGADINAVSSDGNTPLSLMVRNNNGRAVR  307 (471)
T ss_pred             HHcCCCCcccCCCCCCHHHHHHHhCCHHHHH
Confidence            99999 7778999999999999999887763

>PHA02798 ankyrin-like protein; Provisional

Probab=99.92  E-value=1.6e-24  Score=167.99  Aligned_cols=151  Identities=11%  Similarity=0.006  Sum_probs=112.4

Q ss_pred             cchhhHHHHHHHHhC---CHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCC---HHHHHHHHhccchhhhhhhcc
Q 036069            6 DIDSVMQVTRYILKN---DWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAP---PMFLDKLVSKVHQNFLQEWVS   78 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g---~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~---~~~v~~Ll~~~~~~~~~~~~d   78 (174)
                      +..|.||||.|+..+   +.++++.|++.|  ++++.. +..| ||||+|+. .++   .+++++|++.+  ++++ ..+
T Consensus       106 d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~G--advn~~-d~~g~tpL~~a~~-~~~~~~~~vv~~Ll~~g--adin-~~~  178 (489)
T PHA02798        106 NSDGETPLYCLLSNGYINNLEILLFMIENG--ADTTLL-DKDGFTMLQVYLQ-SNHHIDIEIIKLLLEKG--VDIN-THN  178 (489)
T ss_pred             CCCcCcHHHHHHHcCCcChHHHHHHHHHcC--CCcccc-CCCCCcHHHHHHH-cCCcchHHHHHHHHHhC--CCcc-ccc
Confidence            445777777777764   567777777777  777755 6666 77777777 666   77777777777  6665 553


Q ss_pred             -cCCchHHHHHHhc----CCHHHHHHHHHhCCCC--------------------------------------CCCCCCCC
Q 036069           79 -NEGNACMVHAATG----GKSKLIEILMRYNPNL--------------------------------------PNVRDKSK  115 (174)
Q Consensus        79 -~~g~~~l~~A~~~----~~~~~~~~Ll~~~~~~--------------------------------------~~~~~~~~  115 (174)
                       ..|.||+|.++..    ++.+++++|++.|+.+                                      ++.+|..|
T Consensus       179 ~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G  258 (489)
T PHA02798        179 NKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELG  258 (489)
T ss_pred             CcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCC
Confidence             3567777766543    3566777777665431                                      24466779


Q ss_pred             ccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069          116 LLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       116 ~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      +||||+|+..|+.+++++|++.|+ .+..+..|.|||+.|+..++.+++
T Consensus       259 ~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv  307 (489)
T PHA02798        259 FNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIF  307 (489)
T ss_pred             ccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHH
Confidence            999999999999999999999999 778999999999999999887655

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.92  E-value=1.4e-24  Score=172.25  Aligned_cols=143  Identities=10%  Similarity=0.031  Sum_probs=126.2

Q ss_pred             cchhhHHHHHHHHh--CCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCC--HHHHHHHHhccchhhhhhhcccC
Q 036069            6 DIDSVMQVTRYILK--NDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAP--PMFLDKLVSKVHQNFLQEWVSNE   80 (174)
Q Consensus         6 ~~~~~~~L~~A~~~--g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~--~~~v~~Ll~~~~~~~~~~~~d~~   80 (174)
                      +..|.||||.|+..  ++.+++++|++.|  ++++.+ +..| ||||+|++ .|+  .+++++|++.|  ++++ .+|..
T Consensus       174 d~~G~TpLH~A~~n~~~~~eIVklLLe~G--ADVN~k-D~~G~TPLH~Aa~-~g~~~~eIVklLLe~G--ADVN-~kD~~  246 (764)
T PHA02716        174 KKTGYGILHAYLGNMYVDIDILEWLCNNG--VNVNLQ-NNHLITPLHTYLI-TGNVCASVIKKIIELG--GDMD-MKCVN  246 (764)
T ss_pred             CCCCCcHHHHHHHhccCCHHHHHHHHHcC--CCCCCC-CCCCCCHHHHHHH-cCCCCHHHHHHHHHcC--CCCC-CCCCC
Confidence            56799999998654  5789999999999  999977 8888 99999999 885  48999999999  9999 99999


Q ss_pred             CchHHHHH-------------------------------------HhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHH
Q 036069           81 GNACMVHA-------------------------------------ATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAA  123 (174)
Q Consensus        81 g~~~l~~A-------------------------------------~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~  123 (174)
                      |.||||.|                                     +..|+.+++++|++.|++ ++.+|..|+||||+|+
T Consensus       247 G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAd-IN~kD~~G~TPLH~Aa  325 (764)
T PHA02716        247 GMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVK-LHYKDSAGRTCLHQYI  325 (764)
T ss_pred             CCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCc-eeccCCCCCCHHHHHH
Confidence            99999965                                     345778999999999999 5999999999999976


Q ss_pred             h--cCChHHHHHHHhcCC-CcccCCCCcchHHHHHH
Q 036069          124 Q--LGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLIN  156 (174)
Q Consensus       124 ~--~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~  156 (174)
                      .  .++.+++++|++.|+ .+.++..|.||||.|+.
T Consensus       326 a~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~  361 (764)
T PHA02716        326 LRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLS  361 (764)
T ss_pred             HHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHH
Confidence            4  468899999999999 67789999999999875

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.92  E-value=1.3e-24  Score=172.34  Aligned_cols=141  Identities=13%  Similarity=0.093  Sum_probs=123.9

Q ss_pred             ccchhhHHHHHHHHhCC--HHHHHHHHHcCCCccccccccCCc-cHHHHH------------------------------
Q 036069            5 TDIDSVMQVTRYILKND--WKDLEEYIMSKTSNTLTDKITGGL-SIFDLI------------------------------   51 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~--~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A------------------------------   51 (174)
                      .|.+|.||||.|++.|+  .++++.|++.|  ++++.+ +..| ||||+|                              
T Consensus       208 kD~~G~TPLH~Aa~~g~~~~eIVklLLe~G--ADVN~k-D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~  284 (764)
T PHA02716        208 QNNHLITPLHTYLITGNVCASVIKKIIELG--GDMDMK-CVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMI  284 (764)
T ss_pred             CCCCCCCHHHHHHHcCCCCHHHHHHHHHcC--CCCCCC-CCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhh
Confidence            46679999999999995  48999999999  999977 7788 999965                              


Q ss_pred             -------HhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHh--cCCHHHHHHHHHhCCCCCCCCCCCCccHHHHH
Q 036069           52 -------VNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAAT--GGKSKLIEILMRYNPNLPNVRDKSKLLPIHKA  122 (174)
Q Consensus        52 -------~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~--~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a  122 (174)
                             +. .|+.+++++|++.+  ++++ .+|..|.||||+|+.  .++.+++++|++.|++ ++.+|..|+||||+|
T Consensus       285 L~~~i~AA~-~g~leiVklLLe~G--AdIN-~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GAD-IN~kD~~G~TPLH~A  359 (764)
T PHA02716        285 LHSYITLAR-NIDISVVYSFLQPG--VKLH-YKDSAGRTCLHQYILRHNISTDIIKLLHEYGND-LNEPDNIGNTVLHTY  359 (764)
T ss_pred             hHHHHHHHH-cCCHHHHHHHHhCC--Ccee-ccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCC-CccCCCCCCCHHHHH
Confidence                   44 57788899999998  8888 899999999999763  5689999999999999 599999999999998


Q ss_pred             Hh--------------cCChHHHHHHHhcCC-CcccCCCCcchHHH
Q 036069          123 AQ--------------LGHRDTVRYLLSKTT-AHLDGHDWSTLLKD  153 (174)
Q Consensus       123 ~~--------------~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~  153 (174)
                      +.              .++.+++++|++.|+ .+.++..|.||||.
T Consensus       360 ~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~  405 (764)
T PHA02716        360 LSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTS  405 (764)
T ss_pred             HHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHH
Confidence            65              368899999999999 77799999999994

>PHA02795 ankyrin-like protein; Provisional

Probab=99.92  E-value=2.4e-24  Score=161.24  Aligned_cols=146  Identities=8%  Similarity=-0.075  Sum_probs=129.4

Q ss_pred             ccchhhHHHHHHHH--hCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhh-----
Q 036069            5 TDIDSVMQVTRYIL--KNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEW-----   76 (174)
Q Consensus         5 ~~~~~~~~L~~A~~--~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~-----   76 (174)
                      .+.+++|+||.++.  .|+.+++++|+++|  ++++.   ..+ ||||.|+. .++.+++++|++++  +...+.     
T Consensus       112 ~~~~~~~~L~~~~~n~~n~~eiV~~LI~~G--ADIn~---~~~~t~lh~A~~-~~~~eIVk~Lls~G--a~~~n~~~~~l  183 (437)
T PHA02795        112 NCNSVQDLLLYYLSNAYVEIDIVDFMVDHG--AVIYK---IECLNAYFRGIC-KKESSVVEFILNCG--IPDENDVKLDL  183 (437)
T ss_pred             ccccccHHHHHHHHhcCCCHHHHHHHHHCC--CCCCC---CCCCCHHHHHHH-cCcHHHHHHHHhcC--Ccccccccchh
Confidence            45668999999999  99999999999999  99874   344 99999999 99999999999998  422201     


Q ss_pred             cccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHH
Q 036069           77 VSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLI  155 (174)
Q Consensus        77 ~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~  155 (174)
                      .+..+.+++|.|+..++.+++++|+.+|++ ++.+|..|.||||+|+..|+.+++++|+++|+ .+.++..|.||||.|+
T Consensus       184 ~~~~~~t~l~~a~~~~~~eIve~LIs~GAD-IN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa  262 (437)
T PHA02795        184 YKIIQYTRGFLVDEPTVLEIYKLCIPYIED-INQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAV  262 (437)
T ss_pred             hhhhccchhHHHHhcCHHHHHHHHHhCcCC-cCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence            123478999999999999999999999999 59999999999999999999999999999999 7789999999999999


Q ss_pred             HcCc
Q 036069          156 NCNL  159 (174)
Q Consensus       156 ~~~~  159 (174)
                      ..|+
T Consensus       263 ~~g~  266 (437)
T PHA02795        263 DRGS  266 (437)
T ss_pred             HcCC
Confidence            9884

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.92  E-value=6.4e-25  Score=170.11  Aligned_cols=144  Identities=14%  Similarity=0.170  Sum_probs=129.8

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .|.+|.||||+|++.|..+++..|+..|  ++++.+ +.++ ||||.|++ .|+.++|+-|++..+...++ ..|..|.|
T Consensus       269 ~d~dg~tpLH~a~r~G~~~svd~Ll~~G--a~I~~k-n~d~~spLH~AA~-yg~~ntv~rLL~~~~~rlln-e~D~~g~t  343 (929)
T KOG0510|consen  269 EDNDGCTPLHYAARQGGPESVDNLLGFG--ASINSK-NKDEESPLHFAAI-YGRINTVERLLQESDTRLLN-ESDLHGMT  343 (929)
T ss_pred             ccccCCchHHHHHHcCChhHHHHHHHcC--Cccccc-CCCCCCchHHHHH-cccHHHHHHHHhCcCccccc-cccccCCC
Confidence            3678999999999999999999999999  999977 8888 99999999 99999999999944345566 78889999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCC--CCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHH
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPN--VRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKD  153 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~--~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~  153 (174)
                      |||+|+..||-.+++.|++.|+...+  ..|.+|.||||.|+.+|+..++++|++.|+ .+.++..|.++|+.
T Consensus       344 pLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  344 PLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             chhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence            99999999999999999999998643  349999999999999999999999999999 66788888888873

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.92  E-value=3.7e-24  Score=174.37  Aligned_cols=146  Identities=12%  Similarity=0.074  Sum_probs=115.6

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHH
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMV   86 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~   86 (174)
                      ++.++|+.||..|+.+.++.|++.|  ++++.. +..| ||||+|+. .|+.+++++|++++  ++++ .+|..|.||||
T Consensus       524 ~~~~~L~~Aa~~g~~~~l~~Ll~~G--~d~n~~-d~~G~TpLh~Aa~-~g~~~~v~~Ll~~g--adin-~~d~~G~TpL~  596 (823)
T PLN03192        524 NMASNLLTVASTGNAALLEELLKAK--LDPDIG-DSKGRTPLHIAAS-KGYEDCVLVLLKHA--CNVH-IRDANGNTALW  596 (823)
T ss_pred             cchhHHHHHHHcCCHHHHHHHHHCC--CCCCCC-CCCCCCHHHHHHH-cChHHHHHHHHhcC--CCCC-CcCCCCCCHHH
Confidence            4567888888888888888888888  888866 7777 88888888 88888888888888  7777 88888888888


Q ss_pred             HHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           87 HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      +|+..|+.+++++|++.++.. +  ...+.++||.|+..|+.+++++|+++|+ .+.++.+|.||||.|+..|+.+++
T Consensus       597 ~A~~~g~~~iv~~L~~~~~~~-~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv  671 (823)
T PLN03192        597 NAISAKHHKIFRILYHFASIS-D--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMV  671 (823)
T ss_pred             HHHHhCCHHHHHHHHhcCccc-C--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHH
Confidence            888888888888887765542 2  2345677888888888888888888777 566777788888888877776665

>PHA02946 ankyin-like protein; Provisional

Probab=99.92  E-value=7.6e-24  Score=161.91  Aligned_cols=147  Identities=14%  Similarity=0.108  Sum_probs=128.5

Q ss_pred             ccchhhHHHHHHHHhCC--HHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCC
Q 036069            5 TDIDSVMQVTRYILKND--WKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEG   81 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~--~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g   81 (174)
                      .|.+|.||||.|+..++  .++++.|++.|  ++++...+..| |||| |+. .++.+++++|++.+  .+++ .+|..|
T Consensus       101 ~d~~g~TpLh~A~~~~~~~~e~v~lLl~~G--adin~~~d~~g~tpL~-aa~-~~~~~vv~~Ll~~g--ad~~-~~d~~G  173 (446)
T PHA02946        101 CDKQHKTPLYYLSGTDDEVIERINLLVQYG--AKINNSVDEEGCGPLL-ACT-DPSERVFKKIMSIG--FEAR-IVDKFG  173 (446)
T ss_pred             CCCCCCCHHHHHHHcCCchHHHHHHHHHcC--CCcccccCCCCCcHHH-HHH-CCChHHHHHHHhcc--cccc-ccCCCC
Confidence            46789999999988764  78999999999  88886547778 9997 777 79999999999999  8888 999999


Q ss_pred             chHHHHHHhcC--CHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcC--ChHHHHHHHhcCC-CcccCCCCcchHHHHHH
Q 036069           82 NACMVHAATGG--KSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLG--HRDTVRYLLSKTT-AHLDGHDWSTLLKDLIN  156 (174)
Q Consensus        82 ~~~l~~A~~~~--~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~--~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~  156 (174)
                      .||||+|+..+  +.+++++|++.|++ ++.+|..|.||||+|+..|  +.+++++|+. ++ .+.++..|.||||.|+.
T Consensus       174 ~t~Lh~A~~~~~~~~~~v~~Ll~~Gad-in~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~  251 (446)
T PHA02946        174 KNHIHRHLMSDNPKASTISWMMKLGIS-PSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIK  251 (446)
T ss_pred             CCHHHHHHHhcCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHH
Confidence            99999987654  57899999999999 5999999999999999976  7899999885 56 66689999999999999


Q ss_pred             cCcc
Q 036069          157 CNLF  160 (174)
Q Consensus       157 ~~~~  160 (174)
                      .++.
T Consensus       252 ~~~~  255 (446)
T PHA02946        252 TLSP  255 (446)
T ss_pred             hCCh
Confidence            8763

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.92  E-value=7.4e-24  Score=170.03  Aligned_cols=143  Identities=13%  Similarity=0.042  Sum_probs=63.0

Q ss_pred             hhhHHHHHHHHhC-CHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHH
Q 036069            8 DSVMQVTRYILKN-DWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACM   85 (174)
Q Consensus         8 ~~~~~L~~A~~~g-~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l   85 (174)
                      +|.||||.|+..| +.+.++.|+..|  ++++.. +..| ||||+|+...++.++++.|++.+  .+++ .+|..|.|||
T Consensus       306 ~g~TpLh~Aa~~g~~~~~v~~Ll~~g--adin~~-d~~g~TpLh~A~~~~~~~~iv~lLl~~g--adin-~~d~~G~TpL  379 (682)
T PHA02876        306 KGETPLYLMAKNGYDTENIRTLIMLG--ADVNAA-DRLYITPLHQASTLDRNKDIVITLLELG--ANVN-ARDYCDKTPI  379 (682)
T ss_pred             CCCCHHHHHHHhCCCHHHHHHHHHcC--CCCCCc-ccCCCcHHHHHHHhCCcHHHHHHHHHcC--CCCc-cCCCCCCCHH
Confidence            3444444444444 244444444444  444432 3333 44444443112334444444444  4444 4444555555


Q ss_pred             HHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCC-hHHHHHHHhcCC-CcccCCCCcchHHHHHHc
Q 036069           86 VHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGH-RDTVRYLLSKTT-AHLDGHDWSTLLKDLINC  157 (174)
Q Consensus        86 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~-~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~  157 (174)
                      |+|+..++.+++++|++.|++ ++..+..|.||||+|+..+. ..++++|+++|+ .+.++..|.||||.|+..
T Consensus       380 h~Aa~~~~~~iv~~Ll~~gad-~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~  452 (682)
T PHA02876        380 HYAAVRNNVVIINTLLDYGAD-IEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKK  452 (682)
T ss_pred             HHHHHcCCHHHHHHHHHCCCC-ccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHh
Confidence            555555555555555544444 24444444444444443332 223444444444 333444455555555443

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.92  E-value=3.9e-25  Score=162.65  Aligned_cols=154  Identities=11%  Similarity=0.042  Sum_probs=134.9

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCcccccc----c---cCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhc
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDK----I---TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWV   77 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~----~---~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~   77 (174)
                      +.+|.+||.+|+++|+.+++++|+++- .+.+...    .   .-.| +||-.|+. .||.++|+.|++++  +.++ ..
T Consensus        39 ~~~g~tPL~iaaRnGH~~vVeyLle~~-~a~~e~~GsV~FDge~IegappLWaAsa-AGHl~vVk~L~~~g--a~VN-~t  113 (615)
T KOG0508|consen   39 VQNGGTPLLIAARNGHADVVEYLLEHC-RASPEQGGSVRFDGETIEGAPPLWAASA-AGHLEVVKLLLRRG--ASVN-DT  113 (615)
T ss_pred             ccCCCCceeeehhcCcHHHHHHHHHHh-cCCccCCceEEeCCcccCCCchhhHHhc-cCcHHHHHHHHHhc--Cccc-cc
Confidence            346889999999999999999999954 3444322    1   1246 78888888 99999999999999  8888 66


Q ss_pred             ccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHH
Q 036069           78 SNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLIN  156 (174)
Q Consensus        78 d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~  156 (174)
                      .....|||-.||.-|+.+++++|++++++ +++.|+.|.|.||+||..|+.+++++|++.|+ ..-++..|.|+||.|++
T Consensus       114 T~TNStPLraACfDG~leivKyLvE~gad-~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caE  192 (615)
T KOG0508|consen  114 TRTNSTPLRAACFDGHLEIVKYLVEHGAD-PEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAE  192 (615)
T ss_pred             cccCCccHHHHHhcchhHHHHHHHHcCCC-CcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhh
Confidence            66677999999999999999999999999 59999999999999999999999999999999 66789999999999999


Q ss_pred             cCccccccc
Q 036069          157 CNLFGKYYS  165 (174)
Q Consensus       157 ~~~~~~~~~  165 (174)
                      .|+.|++..
T Consensus       193 sG~vdivq~  201 (615)
T KOG0508|consen  193 SGSVDIVQL  201 (615)
T ss_pred             cccHHHHHH
Confidence            999998754

>PHA03095 ankyrin-like protein; Provisional

Probab=99.91  E-value=1.7e-23  Score=161.61  Aligned_cols=143  Identities=11%  Similarity=0.076  Sum_probs=107.0

Q ss_pred             cchhhHHHHHHHHhC---CHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCC-CHHHHHHHHhccchhhhhhhcccC
Q 036069            6 DIDSVMQVTRYILKN---DWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDA-PPMFLDKLVSKVHQNFLQEWVSNE   80 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g---~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g-~~~~v~~Ll~~~~~~~~~~~~d~~   80 (174)
                      +..|.||||.|+..+   +.++++.|++.|  ++++.. +..| ||||+|+. .| ..+++++|++.+  ++++ .+|..
T Consensus        44 ~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~G--adin~~-~~~g~TpLh~A~~-~~~~~~iv~lLl~~g--a~in-~~~~~  116 (471)
T PHA03095         44 GEYGKTPLHLYLHYSSEKVKDIVRLLLEAG--ADVNAP-ERCGFTPLHLYLY-NATTLDVIKLLIKAG--ADVN-AKDKV  116 (471)
T ss_pred             CCCCCCHHHHHHHhcCCChHHHHHHHHHCC--CCCCCC-CCCCCCHHHHHHH-cCCcHHHHHHHHHcC--CCCC-CCCCC
Confidence            456788888888887   788888888888  888866 6677 88888888 77 588888888888  7777 77888


Q ss_pred             CchHHHHHH--hcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcC--ChHHHHHHHhcCC-CcccCCCCcchHHHHH
Q 036069           81 GNACMVHAA--TGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLG--HRDTVRYLLSKTT-AHLDGHDWSTLLKDLI  155 (174)
Q Consensus        81 g~~~l~~A~--~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~--~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~  155 (174)
                      |.||||+|+  ..++.+++++|++.|++ ++..|..|.||+|+|+..+  ..+++++|++.|+ ....+..|.||||.++
T Consensus       117 g~tpLh~a~~~~~~~~~iv~~Ll~~gad-~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~  195 (471)
T PHA03095        117 GRTPLHVYLSGFNINPKVIRLLLRKGAD-VNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHL  195 (471)
T ss_pred             CCCHHHHHhhCCcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence            888888888  44577888888888887 4777777888888777654  4567777777766 3334556666666655


Q ss_pred             H
Q 036069          156 N  156 (174)
Q Consensus       156 ~  156 (174)
                      .
T Consensus       196 ~  196 (471)
T PHA03095        196 Q  196 (471)
T ss_pred             H
Confidence            4

>PHA02917 ankyrin-like protein; Provisional

Probab=99.91  E-value=1.6e-23  Score=166.04  Aligned_cols=148  Identities=11%  Similarity=0.068  Sum_probs=120.9

Q ss_pred             cchhhHHHHHHHHh---CCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCC------------------------
Q 036069            6 DIDSVMQVTRYILK---NDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAP------------------------   57 (174)
Q Consensus         6 ~~~~~~~L~~A~~~---g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~------------------------   57 (174)
                      |.+|.||||.|+..   |+.++++.|++.|  ++++.. +..| ||||+|+. .|+                        
T Consensus        29 d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~g--a~v~~~-~~~g~TpL~~Aa~-~g~~~v~~~~~~~Ll~~~~~~n~~~~~  104 (661)
T PHA02917         29 NQFKNNALHAYLFNEHCNNVEVVKLLLDSG--TNPLHK-NWRQLTPLEEYTN-SRHVKVNKDIAMALLEATGYSNINDFN  104 (661)
T ss_pred             CCCCCcHHHHHHHhhhcCcHHHHHHHHHCC--CCcccc-CCCCCCHHHHHHH-cCChhHHHHHHHHHHhccCCCCCCCcc
Confidence            56799999997665   7899999999999  898866 7778 99998887 554                        


Q ss_pred             -----------HHHHHHHHhccchhhhhhhcccCCchHHHHHH--hcCCHHHHHHHHHhCCCCCCCCCC---CC------
Q 036069           58 -----------PMFLDKLVSKVHQNFLQEWVSNEGNACMVHAA--TGGKSKLIEILMRYNPNLPNVRDK---SK------  115 (174)
Q Consensus        58 -----------~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~--~~~~~~~~~~Ll~~~~~~~~~~~~---~~------  115 (174)
                                 .+++++|++.+  ++++ .+|..|.||||.++  ..|+.+++++|+++|++ ++..|.   .|      
T Consensus       105 ~~~~~a~~~~~~e~vk~Ll~~G--adin-~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~-vn~~d~~~~~g~~~~~~  180 (661)
T PHA02917        105 IFSYMKSKNVDVDLIKVLVEHG--FDLS-VKCENHRSVIENYVMTDDPVPEIIDLFIENGCS-VLYEDEDDEYGYAYDDY  180 (661)
T ss_pred             hHHHHHhhcCCHHHHHHHHHcC--CCCC-ccCCCCccHHHHHHHccCCCHHHHHHHHHcCCC-ccccccccccccccccc
Confidence                       34555566666  6666 78889999999643  57899999999999998 465443   33      


Q ss_pred             -----ccHHHHHHh-----------cCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccc
Q 036069          116 -----LLPIHKAAQ-----------LGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFG  161 (174)
Q Consensus       116 -----~tpl~~a~~-----------~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~  161 (174)
                           .||||+|+.           +++.+++++|++.|+ .+.++.+|.||||.|+..|+.+
T Consensus       181 ~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~  243 (661)
T PHA02917        181 QPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHID  243 (661)
T ss_pred             cccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCc
Confidence                 599999986           568999999999999 7778999999999999999863

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.91  E-value=3.3e-23  Score=139.05  Aligned_cols=135  Identities=14%  Similarity=-0.025  Sum_probs=114.1

Q ss_pred             cchhhHHHHHHHHhCCHH----HHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHH---HHHHHHhccchhhhhhhc
Q 036069            6 DIDSVMQVTRYILKNDWK----DLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPM---FLDKLVSKVHQNFLQEWV   77 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~----~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~---~v~~Ll~~~~~~~~~~~~   77 (174)
                      +.++.++||.|++.|+.+    +++.|++.+  ..++.. +..| ||||+|+. .|+.+   ++++|++.+  ++++ .+
T Consensus        17 ~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g--~~~~~~-d~~g~t~Lh~Aa~-~g~~~~~~~i~~Ll~~G--adin-~~   89 (166)
T PHA02743         17 DEDEQNTFLRICRTGNIYELMEVAPFISGDG--HLLHRY-DHHGRQCTHMVAW-YDRANAVMKIELLVNMG--ADIN-AR   89 (166)
T ss_pred             ccCCCcHHHHHHHcCCHHHHHHHHHHHhhcc--hhhhcc-CCCCCcHHHHHHH-hCccCHHHHHHHHHHcC--CCCC-CC
Confidence            456778999999999984    555667777  777755 7778 99999999 88865   489999999  8888 88


Q ss_pred             c-cCCchHHHHHHhcCCHHHHHHHHH-hCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCc
Q 036069           78 S-NEGNACMVHAATGGKSKLIEILMR-YNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWS  148 (174)
Q Consensus        78 d-~~g~~~l~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~  148 (174)
                      | ..|.||||+|+..++.+++++|+. .+++ ++.++..|.||||+|+..++.+++++|+++|+ .+.++..|.
T Consensus        90 d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad-~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~  162 (166)
T PHA02743         90 ELGTGNTLLHIAASTKNYELAEWLCRQLGVN-LGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL  162 (166)
T ss_pred             CCCCCCcHHHHHHHhCCHHHHHHHHhccCCC-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence            8 589999999999999999999995 7888 58899999999999999999999999999998 555554443

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.90  E-value=6.3e-23  Score=164.71  Aligned_cols=146  Identities=11%  Similarity=0.062  Sum_probs=131.1

Q ss_pred             ccchhhHHHHHHHHhC-CHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCc
Q 036069            5 TDIDSVMQVTRYILKN-DWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGN   82 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g-~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~   82 (174)
                      .+..|.||||.|+..+ +.++++.|++.|  ++++.+ +..| ||||+|+. .|+.+++++|++.+  ++++ ..+..|.
T Consensus       337 ~d~~g~TpLh~A~~~~~~~~iv~lLl~~g--adin~~-d~~G~TpLh~Aa~-~~~~~iv~~Ll~~g--ad~~-~~~~~g~  409 (682)
T PHA02876        337 ADRLYITPLHQASTLDRNKDIVITLLELG--ANVNAR-DYCDKTPIHYAAV-RNNVVIINTLLDYG--ADIE-ALSQKIG  409 (682)
T ss_pred             cccCCCcHHHHHHHhCCcHHHHHHHHHcC--CCCccC-CCCCCCHHHHHHH-cCCHHHHHHHHHCC--CCcc-ccCCCCC
Confidence            4567999999999865 678889999998  999977 8888 99999999 99999999999999  8888 8899999


Q ss_pred             hHHHHHHhcCC-HHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcC-ChHHHHHHHhcCC-CcccCCCCcchHHHHHHcC
Q 036069           83 ACMVHAATGGK-SKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLG-HRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCN  158 (174)
Q Consensus        83 ~~l~~A~~~~~-~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~-~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~  158 (174)
                      ||||+|+..++ ..++++|++.|++ ++.+|..|+||||+|+..| +.+++++|++.|+ .+..+..|.||++.|+..+
T Consensus       410 T~Lh~A~~~~~~~~~vk~Ll~~gad-in~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~~~~  487 (682)
T PHA02876        410 TALHFALCGTNPYMSVKTLIDRGAN-VNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALEYH  487 (682)
T ss_pred             chHHHHHHcCCHHHHHHHHHhCCCC-CCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhC
Confidence            99999997765 5678999999999 5999999999999999987 6899999999999 7779999999999998754

>PHA02798 ankyrin-like protein; Provisional

Probab=99.90  E-value=3.7e-23  Score=160.32  Aligned_cols=151  Identities=9%  Similarity=0.038  Sum_probs=120.0

Q ss_pred             ccchhhHHHHHHHHh-----CCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCC---CHHHHHHHHhccchhhhhh
Q 036069            5 TDIDSVMQVTRYILK-----NDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDA---PPMFLDKLVSKVHQNFLQE   75 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~-----g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g---~~~~v~~Ll~~~~~~~~~~   75 (174)
                      .+..|.||||.|+.+     +..++++.|++.|  ++++.. +..| ||||+|+. .+   +.+++++|++.|  ++++ 
T Consensus        67 ~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~G--adiN~~-d~~G~TpLh~a~~-~~~~~~~~iv~~Ll~~G--advn-  139 (489)
T PHA02798         67 LDNEYSTPLCTILSNIKDYKHMLDIVKILIENG--ADINKK-NSDGETPLYCLLS-NGYINNLEILLFMIENG--ADTT-  139 (489)
T ss_pred             CCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCC--CCCCCC-CCCcCcHHHHHHH-cCCcChHHHHHHHHHcC--CCcc-
Confidence            356788999888764     6688999999998  888866 7778 99999988 65   678999999988  8888 


Q ss_pred             hcccCCchHHHHHHhcCC---HHHHHHHHHhCCCCCCCC-CCCCccHHHHHHhc----CChHHHHHHHhcCC-Cc-----
Q 036069           76 WVSNEGNACMVHAATGGK---SKLIEILMRYNPNLPNVR-DKSKLLPIHKAAQL----GHRDTVRYLLSKTT-AH-----  141 (174)
Q Consensus        76 ~~d~~g~~~l~~A~~~~~---~~~~~~Ll~~~~~~~~~~-~~~~~tpl~~a~~~----~~~~~~~~ll~~~~-~~-----  141 (174)
                      ..|..|.||||+|+..++   .+++++|++.|++ ++.. +..|.||+|.++..    ++.+++++|++.|+ ..     
T Consensus       140 ~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gad-in~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~  218 (489)
T PHA02798        140 LLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVD-INTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKS  218 (489)
T ss_pred             ccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCC-cccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCcc
Confidence            888889999999998887   8899999999888 4665 45688899887764    36788888887765 21     


Q ss_pred             ----------------------------------ccCCCCcchHHHHHHcCccccc
Q 036069          142 ----------------------------------LDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       142 ----------------------------------~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                                                        .++..|.||||.|+..|+.+++
T Consensus       219 ~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v  274 (489)
T PHA02798        219 HKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIF  274 (489)
T ss_pred             ccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHH
Confidence                                              1455688999999988877665

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.90  E-value=5.2e-23  Score=167.71  Aligned_cols=143  Identities=10%  Similarity=-0.014  Sum_probs=127.5

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .|.+|.||||.|+..|+.++++.|++.|  ++++.+ +..| ||||+|+. .|+.+++++|+..+  +..   ....+.+
T Consensus       554 ~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g--adin~~-d~~G~TpL~~A~~-~g~~~iv~~L~~~~--~~~---~~~~~~~  624 (823)
T PLN03192        554 GDSKGRTPLHIAASKGYEDCVLVLLKHA--CNVHIR-DANGNTALWNAIS-AKHHKIFRILYHFA--SIS---DPHAAGD  624 (823)
T ss_pred             CCCCCCCHHHHHHHcChHHHHHHHHhcC--CCCCCc-CCCCCCHHHHHHH-hCCHHHHHHHHhcC--ccc---CcccCch
Confidence            5678999999999999999999999999  999976 8888 99999999 99999999999876  322   2345779


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCC-cchHHHHHHc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDW-STLLKDLINC  157 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g-~t~l~~a~~~  157 (174)
                      +||.|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|+ .+..+..| .||...+...
T Consensus       625 ~L~~Aa~~g~~~~v~~Ll~~Gad-in~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~  699 (823)
T PLN03192        625 LLCTAAKRNDLTAMKELLKQGLN-VDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELL  699 (823)
T ss_pred             HHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Confidence            99999999999999999999999 59999999999999999999999999999999 66777777 8998877643

>PHA02741 hypothetical protein; Provisional

Probab=99.90  E-value=4.2e-23  Score=139.07  Aligned_cols=127  Identities=10%  Similarity=0.033  Sum_probs=106.1

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHc------CCCccccccccCCc-cHHHHHHhhCCC----HHHHHHHHhccchhhh
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMS------KTSNTLTDKITGGL-SIFDLIVNSDAP----PMFLDKLVSKVHQNFL   73 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~------~~~~~~~~~~~~~~-t~L~~A~~~~g~----~~~v~~Ll~~~~~~~~   73 (174)
                      .+..|.+|||.|++.|+.++++.|+..      +  ++++.+ +..| ||||+|+. .|+    .+++++|++.+  +++
T Consensus        17 ~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~g--a~in~~-d~~g~T~Lh~A~~-~g~~~~~~~ii~~Ll~~g--adi   90 (169)
T PHA02741         17 KNSEGENFFHEAARCGCFDIIARFTPFIRGDCHA--AALNAT-DDAGQMCIHIAAE-KHEAQLAAEIIDHLIELG--ADI   90 (169)
T ss_pred             cccCCCCHHHHHHHcCCHHHHHHHHHHhccchhh--hhhhcc-CCCCCcHHHHHHH-cCChHHHHHHHHHHHHcC--CCC
Confidence            356789999999999999999887542      3  567655 7777 99999999 888    47889999888  777


Q ss_pred             hhhccc-CCchHHHHHHhcCCHHHHHHHHH-hCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           74 QEWVSN-EGNACMVHAATGGKSKLIEILMR-YNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        74 ~~~~d~-~g~~~l~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      + .++. .|.||||+|+..++.+++++|+. .+.+ ++..|..|+|||++|+..++.+++++|++.++
T Consensus        91 n-~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~-~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~  156 (169)
T PHA02741         91 N-AQEMLEGDTALHLAAHRRDHDLAEWLCCQPGID-LHFCNADNKSPFELAIDNEDVAMMQILREIVA  156 (169)
T ss_pred             C-CCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence            7 7775 79999999999999999999997 4777 58889999999999999999999999988766

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.90  E-value=1.1e-23  Score=170.84  Aligned_cols=149  Identities=15%  Similarity=0.142  Sum_probs=122.3

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHH
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMV   86 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~   86 (174)
                      +|.||||+|+..|+.++++.+++.+  +..+.. ...+ +++|.+.. .+....++.+++++  ..+. .++..|+||||
T Consensus       473 ~G~T~Lhlaaq~Gh~~~~~llle~~--~~~~~~-~~~~l~~lhla~~-~~~v~~~~~l~~~g--a~v~-~~~~r~~TpLh  545 (1143)
T KOG4177|consen  473 QGFTPLHLAAQEGHTEVVQLLLEGG--ANDNLD-AKKGLTPLHLAAD-EDTVKVAKILLEHG--ANVD-LRTGRGYTPLH  545 (1143)
T ss_pred             ccCcchhhhhccCCchHHHHhhhcC--CccCcc-chhccchhhhhhh-hhhHHHHHHHhhcC--Ccee-hhcccccchHH
Confidence            4666666666666666666666665  444433 4455 66666666 66666666666666  6666 78888999999


Q ss_pred             HHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069           87 HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      .|+.+|+.++|++|++++++ ++.++..|+||||.|+.+|+.+++.+|+++|+ .+..+.+|.|||++|++.|+++++-
T Consensus       546 ~A~~~g~v~~VkfLLe~gAd-v~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k  623 (1143)
T KOG4177|consen  546 VAVHYGNVDLVKFLLEHGAD-VNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVK  623 (1143)
T ss_pred             HHHhcCCchHHHHhhhCCcc-ccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhh
Confidence            99999999999999999999 59999999999999999999999999999999 8889999999999999999988763

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.89  E-value=9.6e-23  Score=132.33  Aligned_cols=149  Identities=15%  Similarity=0.126  Sum_probs=129.2

Q ss_pred             hHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHH
Q 036069           10 VMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHA   88 (174)
Q Consensus        10 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A   88 (174)
                      ..-+..|+..+.+..|+.||+.. +..+|.+ +..+ ||||.|+. .|+.++++.|+..+  ++.. .+...|+||||-|
T Consensus        64 ~rl~lwaae~nrl~eV~~lL~e~-an~vNtr-D~D~YTpLHRAaY-n~h~div~~ll~~g--An~~-a~T~~GWTPLhSA  137 (228)
T KOG0512|consen   64 IRLLLWAAEKNRLTEVQRLLSEK-ANHVNTR-DEDEYTPLHRAAY-NGHLDIVHELLLSG--ANKE-AKTNEGWTPLHSA  137 (228)
T ss_pred             HHHHHHHHhhccHHHHHHHHHhc-ccccccc-ccccccHHHHHHh-cCchHHHHHHHHcc--CCcc-cccccCccchhhh
Confidence            34478899999999999999998 7888877 8889 99999999 99999999999999  8888 9999999999999


Q ss_pred             HhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCCh-HHHHHHHhcCC--CcccCCCCcchHHHHHHcCccccccc
Q 036069           89 ATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHR-DTVRYLLSKTT--AHLDGHDWSTLLKDLINCNLFGKYYS  165 (174)
Q Consensus        89 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~-~~~~~ll~~~~--~~~~~~~g~t~l~~a~~~~~~~~~~~  165 (174)
                      |.+.+.+|+..|+++|++ ++.......||||.|+...+. ..+++|+....  +..++..+.|++.+|-+.+.+.-.++
T Consensus       138 ckWnN~~va~~LLqhgaD-VnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s~~lfe  216 (228)
T KOG0512|consen  138 CKWNNFEVAGRLLQHGAD-VNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMSHYLFE  216 (228)
T ss_pred             hcccchhHHHHHHhccCc-ccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhhHHHHH
Confidence            999999999999999999 599998999999999987654 45666665444  44588899999999999887554443

>PHA02741 hypothetical protein; Provisional

Probab=99.89  E-value=7.6e-22  Score=132.95  Aligned_cols=121  Identities=15%  Similarity=0.171  Sum_probs=104.4

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhcc----chhhhhhhcccCCchHHHHHHhcCC----HHHHHHHHHhCCCCCCCCC
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSKV----HQNFLQEWVSNEGNACMVHAATGGK----SKLIEILMRYNPNLPNVRD  112 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~~----~~~~~~~~~d~~g~~~l~~A~~~~~----~~~~~~Ll~~~~~~~~~~~  112 (174)
                      +..| |+||+|++ .|+.++++.|+...    ....++ .+|..|.||||+|+..|+    .+++++|+..+++ ++.++
T Consensus        18 ~~~g~t~Lh~Aa~-~g~~~~v~~l~~~~~~~~~ga~in-~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad-in~~~   94 (169)
T PHA02741         18 NSEGENFFHEAAR-CGCFDIIARFTPFIRGDCHAAALN-ATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD-INAQE   94 (169)
T ss_pred             ccCCCCHHHHHHH-cCCHHHHHHHHHHhccchhhhhhh-ccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC-CCCCC
Confidence            5567 99999999 99999999986431    126677 889999999999999998    5889999999999 58888


Q ss_pred             C-CCccHHHHHHhcCChHHHHHHHhc-CC-CcccCCCCcchHHHHHHcCccccccc
Q 036069          113 K-SKLLPIHKAAQLGHRDTVRYLLSK-TT-AHLDGHDWSTLLKDLINCNLFGKYYS  165 (174)
Q Consensus       113 ~-~~~tpl~~a~~~~~~~~~~~ll~~-~~-~~~~~~~g~t~l~~a~~~~~~~~~~~  165 (174)
                      . .|.||||+|+..++.+++++|+.. ++ .+..+..|.|||+.|+..|+.+++..
T Consensus        95 ~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~  150 (169)
T PHA02741         95 MLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQI  150 (169)
T ss_pred             cCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHH
Confidence            5 899999999999999999999984 66 66689999999999999998776643

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.88  E-value=2.5e-22  Score=133.42  Aligned_cols=129  Identities=13%  Similarity=0.016  Sum_probs=103.3

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCC---CccccccccCCc-cHHHHHHhhCCCH---HHHHHHHhccchhhhhhhc
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKT---SNTLTDKITGGL-SIFDLIVNSDAPP---MFLDKLVSKVHQNFLQEWV   77 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~---~~~~~~~~~~~~-t~L~~A~~~~g~~---~~v~~Ll~~~~~~~~~~~~   77 (174)
                      .|.+|.||||.|++.|+.+.+........   +..++ ..+..| ||||+|+. .|+.   +++++|++.+  ++++ .+
T Consensus        13 ~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~-~~d~~g~t~Lh~a~~-~~~~~~~e~v~~Ll~~g--adin-~~   87 (154)
T PHA02736         13 PDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVL-EYNRHGKQCVHIVSN-PDKADPQEKLKLLMEWG--ADIN-GK   87 (154)
T ss_pred             cCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHH-HhcCCCCEEEEeecc-cCchhHHHHHHHHHHcC--CCcc-cc
Confidence            35679999999999998543322222110   01122 236778 99999999 9886   4688999999  8888 88


Q ss_pred             c-cCCchHHHHHHhcCCHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           78 S-NEGNACMVHAATGGKSKLIEILMRY-NPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        78 d-~~g~~~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      + ..|.||||+|+..++.+++++|+.. +.+ ++.+|..|.||+|+|+..|+.+++++|+..|+
T Consensus        88 ~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d-~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga  150 (154)
T PHA02736         88 ERVFGNTPLHIAVYTQNYELATWLCNQPGVN-MEILNYAFKTPYYVACERHDAKMMNILRAKGA  150 (154)
T ss_pred             CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCC-CccccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            7 4899999999999999999999974 777 58999999999999999999999999999887

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.88  E-value=1.9e-21  Score=140.47  Aligned_cols=126  Identities=10%  Similarity=0.013  Sum_probs=109.3

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccc---cCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcc-c
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKI---TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVS-N   79 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~---~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d-~   79 (174)
                      ++....++|+.|+..|+.++++.|++.|  ++++.+.   +..| ||||+|+. .++.+++++|+++|  ++++ .++ .
T Consensus        29 d~~~~~~lL~~A~~~~~~eivk~LL~~G--AdiN~~~~~sd~~g~TpLh~Aa~-~~~~eivklLL~~G--ADVN-~~~~~  102 (300)
T PHA02884         29 NKICIANILYSSIKFHYTDIIDAILKLG--ADPEAPFPLSENSKTNPLIYAID-CDNDDAAKLLIRYG--ADVN-RYAEE  102 (300)
T ss_pred             CcCCCCHHHHHHHHcCCHHHHHHHHHCC--CCccccCcccCCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCcC-cccCC
Confidence            4445667788888889999999999999  8998652   2467 99999999 99999999999999  8888 754 5


Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhc
Q 036069           80 EGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK  137 (174)
Q Consensus        80 ~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~  137 (174)
                      .|.||||.|+..++.+++++|+..|++ ++.+|..|.||+++|+..++.+++..+...
T Consensus       103 ~g~TpLh~Aa~~~~~eivklLL~~GAd-in~kd~~G~TpL~~A~~~~~~~~~~~~~~~  159 (300)
T PHA02884        103 AKITPLYISVLHGCLKCLEILLSYGAD-INIQTNDMVTPIELALMICNNFLAFMICDN  159 (300)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHhCChhHHHHhcCC
Confidence            799999999999999999999999999 599999999999999998888887666543

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.88  E-value=3.1e-22  Score=134.59  Aligned_cols=143  Identities=10%  Similarity=0.036  Sum_probs=127.6

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHH
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMV   86 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~   86 (174)
                      -+.+|+.+++.+.+++.+..+.+.    .+| .+|+.| |||.||++ .|+..+|++|++.+  +++. ...+...++|.
T Consensus       128 ~p~s~~slsVhql~L~~~~~~~~n----~VN-~~De~GfTpLiWAaa-~G~i~vV~fLL~~G--Adp~-~lgk~resALs  198 (296)
T KOG0502|consen  128 MPWSPLSLSVHQLHLDVVDLLVNN----KVN-ACDEFGFTPLIWAAA-KGHIPVVQFLLNSG--ADPD-ALGKYRESALS  198 (296)
T ss_pred             ccCChhhHHHHHHHHHHHHHHhhc----ccc-CccccCchHhHHHHh-cCchHHHHHHHHcC--CChh-hhhhhhhhhHh
Confidence            478889999998887776554444    466 449999 99999999 99999999999999  7777 77788889999


Q ss_pred             HHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcc
Q 036069           87 HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLF  160 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~  160 (174)
                      +|++.|..+++++|+..+.+ +|..|..|-|||.||++.|+.+|++.|+..|+ ....+..|.+++..|+..|+.
T Consensus       199 LAt~ggytdiV~lLL~r~vd-VNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr  272 (296)
T KOG0502|consen  199 LATRGGYTDIVELLLTREVD-VNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR  272 (296)
T ss_pred             HHhcCChHHHHHHHHhcCCC-cceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH
Confidence            99999999999999999999 59999999999999999999999999999999 777889999999999998864

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.88  E-value=1.5e-21  Score=151.54  Aligned_cols=143  Identities=11%  Similarity=0.063  Sum_probs=117.3

Q ss_pred             chhhHHHHHHHHhC--CHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCC------CHHHHHHHHhccchhhhhhhc
Q 036069            7 IDSVMQVTRYILKN--DWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDA------PPMFLDKLVSKVHQNFLQEWV   77 (174)
Q Consensus         7 ~~~~~~L~~A~~~g--~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g------~~~~v~~Ll~~~~~~~~~~~~   77 (174)
                      .+|.+||+.++..+  +.++++.|++.|  ++++.+ + .+ ||||.|+. .+      +.+++++|++.|  ++++ .+
T Consensus        33 ~~g~t~l~~~~~~~~~~~~iv~~Ll~~G--Advn~~-~-~~~tpL~~a~~-~~~~~~~~~~~iv~~Ll~~G--adin-~~  104 (494)
T PHA02989         33 YRGNSILLLYLKRKDVKIKIVKLLIDNG--ADVNYK-G-YIETPLCAVLR-NREITSNKIKKIVKLLLKFG--ADIN-LK  104 (494)
T ss_pred             cCCCCHHHHHHhcCCCChHHHHHHHHcC--CCccCC-C-CCCCcHHHHHh-ccCcchhhHHHHHHHHHHCC--CCCC-CC
Confidence            35888887666543  689999999999  999865 4 45 99998876 54      468999999999  8888 99


Q ss_pred             ccCCchHHHHHHhc---CCHHHHHHHHHhCCCCC-CCCCCCCccHHHHHHhc--CChHHHHHHHhcCC-Ccc-cCCCCcc
Q 036069           78 SNEGNACMVHAATG---GKSKLIEILMRYNPNLP-NVRDKSKLLPIHKAAQL--GHRDTVRYLLSKTT-AHL-DGHDWST  149 (174)
Q Consensus        78 d~~g~~~l~~A~~~---~~~~~~~~Ll~~~~~~~-~~~~~~~~tpl~~a~~~--~~~~~~~~ll~~~~-~~~-~~~~g~t  149 (174)
                      |..|.||||.|+..   ++.+++++|+++|++ + +.+|..|+||||+|+..  ++.+++++|+++|+ ... .+..|.|
T Consensus       105 d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gad-in~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~t  183 (494)
T PHA02989        105 TFNGVSPIVCFIYNSNINNCDMLRFLLSKGIN-VNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLT  183 (494)
T ss_pred             CCCCCcHHHHHHHhcccCcHHHHHHHHHCCCC-cccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCC
Confidence            99999999988654   678999999999998 6 68889999999998754  57899999999998 444 5778999


Q ss_pred             hHHHHHHcC
Q 036069          150 LLKDLINCN  158 (174)
Q Consensus       150 ~l~~a~~~~  158 (174)
                      ||+.|+..+
T Consensus       184 pL~~a~~~~  192 (494)
T PHA02989        184 PMNIYLRND  192 (494)
T ss_pred             hHHHHHhcc
Confidence            999887654

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.87  E-value=2.1e-22  Score=135.45  Aligned_cols=137  Identities=16%  Similarity=0.102  Sum_probs=120.6

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      |..|.|||.+|+.+|+++++++||+.|  ++++.. .... ++|.+|++ .|-.++|++|++..  .+++ ..|.+|-||
T Consensus       157 De~GfTpLiWAaa~G~i~vV~fLL~~G--Adp~~l-gk~resALsLAt~-ggytdiV~lLL~r~--vdVN-vyDwNGgTp  229 (296)
T KOG0502|consen  157 DEFGFTPLIWAAAKGHIPVVQFLLNSG--ADPDAL-GKYRESALSLATR-GGYTDIVELLLTRE--VDVN-VYDWNGGTP  229 (296)
T ss_pred             cccCchHhHHHHhcCchHHHHHHHHcC--CChhhh-hhhhhhhHhHHhc-CChHHHHHHHHhcC--CCcc-eeccCCCce
Confidence            667999999999999999999999999  998855 5555 99999999 99999999999999  8899 999999999


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchH
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLL  151 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l  151 (174)
                      |-+|++.++.+|++.|+..|++ ++..+.+|++++..|...|+. +|+..++... ..+++..-.+|+
T Consensus       230 LlyAvrgnhvkcve~Ll~sGAd-~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~~~  295 (296)
T KOG0502|consen  230 LLYAVRGNHVKCVESLLNSGAD-VTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRTPL  295 (296)
T ss_pred             eeeeecCChHHHHHHHHhcCCC-cccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCCCC
Confidence            9999999999999999999999 599999999999999999987 6777766655 444554445554

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.86  E-value=5.8e-21  Score=128.19  Aligned_cols=124  Identities=13%  Similarity=0.046  Sum_probs=104.1

Q ss_pred             ccccccccCCc-cHHHHHHhhCCCH----HHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHH---HHHHHHhCCC
Q 036069           35 NTLTDKITGGL-SIFDLIVNSDAPP----MFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKL---IEILMRYNPN  106 (174)
Q Consensus        35 ~~~~~~~~~~~-t~L~~A~~~~g~~----~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~---~~~Ll~~~~~  106 (174)
                      ++++.. +..+ ++||.|++ .|+.    +++++|++.+  ..++ .+|..|.||||+|+..|+.+.   +++|++.|++
T Consensus        11 ~~~~~~-~~~~~~~l~~a~~-~g~~~~l~~~~~~l~~~g--~~~~-~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad   85 (166)
T PHA02743         11 LGAVEI-DEDEQNTFLRICR-TGNIYELMEVAPFISGDG--HLLH-RYDHHGRQCTHMVAWYDRANAVMKIELLVNMGAD   85 (166)
T ss_pred             hHHhhh-ccCCCcHHHHHHH-cCCHHHHHHHHHHHhhcc--hhhh-ccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC
Confidence            445434 4556 89999999 9998    5666777777  7777 889999999999999987654   8999999998


Q ss_pred             CCCCCC-CCCccHHHHHHhcCChHHHHHHHh-cCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          107 LPNVRD-KSKLLPIHKAAQLGHRDTVRYLLS-KTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       107 ~~~~~~-~~~~tpl~~a~~~~~~~~~~~ll~-~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                       ++.++ ..|.||||+|+..|+.+++++|+. .++ .+.++..|.||||+|+..++.+++.
T Consensus        86 -in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~  145 (166)
T PHA02743         86 -INARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMME  145 (166)
T ss_pred             -CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHH
Confidence             58887 589999999999999999999995 677 6668899999999999999877653

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.86  E-value=8.8e-21  Score=136.99  Aligned_cols=117  Identities=14%  Similarity=0.071  Sum_probs=103.3

Q ss_pred             cCCc--cHHHHHHhhCCCHHHHHHHHhccchhhhhhhc----ccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCC-CCC
Q 036069           42 TGGL--SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWV----SNEGNACMVHAATGGKSKLIEILMRYNPNLPNVR-DKS  114 (174)
Q Consensus        42 ~~~~--t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~----d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~  114 (174)
                      +..+  ++||.|++ .|+.+++++|+++|  ++++ .+    +..|.||||+|+..++.+++++|+++|++ ++.. +..
T Consensus        29 d~~~~~~lL~~A~~-~~~~eivk~LL~~G--AdiN-~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GAD-VN~~~~~~  103 (300)
T PHA02884         29 NKICIANILYSSIK-FHYTDIIDAILKLG--ADPE-APFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGAD-VNRYAEEA  103 (300)
T ss_pred             CcCCCCHHHHHHHH-cCCHHHHHHHHHCC--CCcc-ccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cCcccCCC
Confidence            4444  77888888 99999999999999  7777 76    35799999999999999999999999999 5875 567


Q ss_pred             CccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069          115 KLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       115 ~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      |.||||+|+..|+.+++++|++.|+ .+.++..|.|||+.|+..++.+++
T Consensus       104 g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~  153 (300)
T PHA02884        104 KITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLA  153 (300)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHH
Confidence            9999999999999999999999999 777899999999999987665544

>PHA02795 ankyrin-like protein; Provisional

Probab=99.85  E-value=1.4e-20  Score=141.26  Aligned_cols=125  Identities=13%  Similarity=0.047  Sum_probs=112.0

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCcccccccc-----CCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCC
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKIT-----GGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEG   81 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~-----~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g   81 (174)
                      ++.||+|.|+..|+.++++.|+++|  +......+     ..+ +++|.|+. .++.+++++|++++  ++++ .+|..|
T Consensus       148 ~~~t~lh~A~~~~~~eIVk~Lls~G--a~~~n~~~~~l~~~~~~t~l~~a~~-~~~~eIve~LIs~G--ADIN-~kD~~G  221 (437)
T PHA02795        148 ECLNAYFRGICKKESSVVEFILNCG--IPDENDVKLDLYKIIQYTRGFLVDE-PTVLEIYKLCIPYI--EDIN-QLDAGG  221 (437)
T ss_pred             CCCCHHHHHHHcCcHHHHHHHHhcC--CcccccccchhhhhhccchhHHHHh-cCHHHHHHHHHhCc--CCcC-cCCCCC
Confidence            5689999999999999999999999  54332211     236 89999999 99999999999999  9999 999999


Q ss_pred             chHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCC--------hHHHHHHHhcCC
Q 036069           82 NACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGH--------RDTVRYLLSKTT  139 (174)
Q Consensus        82 ~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~--------~~~~~~ll~~~~  139 (174)
                      .||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+        .+++++|+++|+
T Consensus       222 ~TpLh~Aa~~g~~eiVelLL~~GAd-IN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~ga  286 (437)
T PHA02795        222 RTLLYRAIYAGYIDLVSWLLENGAN-VNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPL  286 (437)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCC
Confidence            9999999999999999999999999 59999999999999999884        699999999988

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.84  E-value=8.7e-21  Score=154.15  Aligned_cols=151  Identities=14%  Similarity=0.058  Sum_probs=136.1

Q ss_pred             cchhhHHHHHHHHhC-CHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            6 DIDSVMQVTRYILKN-DWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g-~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      +..|+||+|.|+..| ..+....+++.+  .+++.. ...| ||||.|+. .|+.++++.+++..  +..+ .....+.+
T Consensus       437 ~~lG~T~lhvaa~~g~~~~~~~~l~~~g--~~~n~~-s~~G~T~Lhlaaq-~Gh~~~~~llle~~--~~~~-~~~~~~l~  509 (1143)
T KOG4177|consen  437 AKLGYTPLHVAAKKGRYLQIARLLLQYG--ADPNAV-SKQGFTPLHLAAQ-EGHTEVVQLLLEGG--ANDN-LDAKKGLT  509 (1143)
T ss_pred             hhcCCChhhhhhhcccHhhhhhhHhhcC--CCcchh-ccccCcchhhhhc-cCCchHHHHhhhcC--CccC-ccchhccc
Confidence            456899999999999 667777777777  899866 8888 99999999 99999999999987  6666 67778999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGK  162 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~  162 (174)
                      ++|.|+..+...+++.++++|++ ++.++..++||||+|+.+|+.++|++|+++|+ ...+++.|.||||.|+..|+.++
T Consensus       510 ~lhla~~~~~v~~~~~l~~~ga~-v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i  588 (1143)
T KOG4177|consen  510 PLHLAADEDTVKVAKILLEHGAN-VDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDI  588 (1143)
T ss_pred             hhhhhhhhhhHHHHHHHhhcCCc-eehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHH
Confidence            99999999999999999999999 59999999999999999999999999999999 66688999999999999999887


Q ss_pred             cc
Q 036069          163 YY  164 (174)
Q Consensus       163 ~~  164 (174)
                      +.
T Consensus       589 ~~  590 (1143)
T KOG4177|consen  589 AE  590 (1143)
T ss_pred             HH
Confidence            74

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.83  E-value=2.1e-21  Score=135.70  Aligned_cols=110  Identities=17%  Similarity=0.166  Sum_probs=81.1

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      |..|.+|||+|++.|+..+++.|+.+|  +.+|.. +.+. ||||+|+. +|+-++|+.|++..  ++++ ..+..|+||
T Consensus        31 ddhgfsplhwaakegh~aivemll~rg--arvn~t-nmgddtplhlaaa-hghrdivqkll~~k--advn-avnehgntp  103 (448)
T KOG0195|consen   31 DDHGFSPLHWAAKEGHVAIVEMLLSRG--ARVNST-NMGDDTPLHLAAA-HGHRDIVQKLLSRK--ADVN-AVNEHGNTP  103 (448)
T ss_pred             cccCcchhhhhhhcccHHHHHHHHhcc--cccccc-cCCCCcchhhhhh-cccHHHHHHHHHHh--cccc-hhhccCCCc
Confidence            456777777777777777777777777  777644 4444 77777777 77777777777777  7777 777777777


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHH
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAA  123 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~  123 (174)
                      ||+||..|...+.+-|+..|+. +++.|.+|.||+..|-
T Consensus       104 lhyacfwgydqiaedli~~ga~-v~icnk~g~tpldkak  141 (448)
T KOG0195|consen  104 LHYACFWGYDQIAEDLISCGAA-VNICNKKGMTPLDKAK  141 (448)
T ss_pred             hhhhhhhcHHHHHHHHHhccce-eeecccCCCCchhhhc
Confidence            7777777777777777777776 4777777777776664

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.82  E-value=4.2e-20  Score=137.91  Aligned_cols=145  Identities=13%  Similarity=0.167  Sum_probs=126.1

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhh--------
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQE--------   75 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~--------   75 (174)
                      .+.+|.|+||-++.-.+.+|++++++.+  ++++.. +..+ ||||.|+. .|+..++++|+.++  +++..        
T Consensus        69 ~n~DglTalhq~~id~~~e~v~~l~e~g--a~Vn~~-d~e~wtPlhaaas-cg~~~i~~~li~~g--A~~~avNsdg~~P  142 (527)
T KOG0505|consen   69 CNVDGLTALHQACIDDNLEMVKFLVENG--ANVNAQ-DNEGWTPLHAAAS-CGYLNIVEYLIQHG--ANLLAVNSDGNMP  142 (527)
T ss_pred             cCCccchhHHHHHhcccHHHHHHHHHhc--CCcccc-ccccCCcchhhcc-cccHHHHHHHHHhh--hhhhhccCCCCCc
Confidence            3568999999999999999999999999  999977 6666 99999999 99999999999987  32221        


Q ss_pred             --------------------------------------------------hcccCCchHHHHHHhcCCHHHHHHHHHhCC
Q 036069           76 --------------------------------------------------WVSNEGNACMVHAATGGKSKLIEILMRYNP  105 (174)
Q Consensus        76 --------------------------------------------------~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~  105 (174)
                                                                        ..+..|.|.||+|+..|..++.++|++.+.
T Consensus       143 ~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~  222 (527)
T KOG0505|consen  143 YDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGY  222 (527)
T ss_pred             cccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhcc
Confidence                                                              234448899999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHH
Q 036069          106 NLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLIN  156 (174)
Q Consensus       106 ~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~  156 (174)
                      + ++.+|.+||||||.|+..|+.++.+.|+.+|+ .+.....|.||+.+|..
T Consensus       223 ~-~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  223 S-VNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             C-cccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence            9 59999999999999999999999999999999 77788889999887764

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.82  E-value=7.4e-20  Score=121.53  Aligned_cols=119  Identities=13%  Similarity=0.119  Sum_probs=96.0

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhcc-----chhhhhhhcccCCchHHHHHHhcCCH---HHHHHHHHhCCCCCCCCC
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSKV-----HQNFLQEWVSNEGNACMVHAATGGKS---KLIEILMRYNPNLPNVRD  112 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~~-----~~~~~~~~~d~~g~~~l~~A~~~~~~---~~~~~Ll~~~~~~~~~~~  112 (174)
                      +..| ||||+|++ .|+.+  ..+....     ++..+. ..|..|.||||+|+..++.   +++++|++.|++ ++.++
T Consensus        14 d~~g~tpLh~A~~-~g~~~--~l~~~~~~~~~~~~~~~~-~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gad-in~~~   88 (154)
T PHA02736         14 DIEGENILHYLCR-NGGVT--DLLAFKNAISDENRYLVL-EYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGAD-INGKE   88 (154)
T ss_pred             CCCCCCHHHHHHH-hCCHH--HHHHHHHHhcchhHHHHH-HhcCCCCEEEEeecccCchhHHHHHHHHHHcCCC-ccccC
Confidence            6678 99999999 99842  3322221     122344 5788999999999999986   468899999998 58887


Q ss_pred             -CCCccHHHHHHhcCChHHHHHHHhc-CC-CcccCCCCcchHHHHHHcCccccccc
Q 036069          113 -KSKLLPIHKAAQLGHRDTVRYLLSK-TT-AHLDGHDWSTLLKDLINCNLFGKYYS  165 (174)
Q Consensus       113 -~~~~tpl~~a~~~~~~~~~~~ll~~-~~-~~~~~~~g~t~l~~a~~~~~~~~~~~  165 (174)
                       ..|.||||+|+..|+.+++++|+.. ++ .+.++..|.|||++|+..|+.+++..
T Consensus        89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~  144 (154)
T PHA02736         89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNI  144 (154)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHH
Confidence             4899999999999999999999985 65 66688999999999999998877643

>PHA02917 ankyrin-like protein; Provisional

Probab=99.82  E-value=4.1e-19  Score=141.17  Aligned_cols=137  Identities=14%  Similarity=0.093  Sum_probs=112.9

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHH--hhCCCHHHHHHHHhccchhhhhhhccc---CC---
Q 036069           11 MQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIV--NSDAPPMFLDKLVSKVHQNFLQEWVSN---EG---   81 (174)
Q Consensus        11 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~--~~~g~~~~v~~Ll~~~~~~~~~~~~d~---~g---   81 (174)
                      ++++.|+..|+.++++.|++.|  ++++.. +..| ||||.++  . .|+.+++++|+++|  ++++ .+|.   .|   
T Consensus       105 ~~~~~a~~~~~~e~vk~Ll~~G--adin~~-d~~g~T~L~~~~a~~-~~~~eivklLi~~G--a~vn-~~d~~~~~g~~~  177 (661)
T PHA02917        105 IFSYMKSKNVDVDLIKVLVEHG--FDLSVK-CENHRSVIENYVMTD-DPVPEIIDLFIENG--CSVL-YEDEDDEYGYAY  177 (661)
T ss_pred             hHHHHHhhcCCHHHHHHHHHcC--CCCCcc-CCCCccHHHHHHHcc-CCCHHHHHHHHHcC--CCcc-cccccccccccc
Confidence            5566777788899999999999  999977 7788 9999643  5 68999999999999  7765 5442   23   


Q ss_pred             --------chHHHHHHh-----------cCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCCh--HHHHHHHhcCC-
Q 036069           82 --------NACMVHAAT-----------GGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHR--DTVRYLLSKTT-  139 (174)
Q Consensus        82 --------~~~l~~A~~-----------~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~--~~~~~ll~~~~-  139 (174)
                              .||||+|+.           +++.+++++|+++|++ ++.+|..|.||||+|+..|+.  +++++|++ |+ 
T Consensus       178 ~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gad-vn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d  255 (661)
T PHA02917        178 DDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIK-PSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GID  255 (661)
T ss_pred             ccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCC-cccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCc
Confidence                    599999985           4689999999999999 599999999999999999985  79999975 55 


Q ss_pred             Cc----ccCCCCcchHHHHHH
Q 036069          140 AH----LDGHDWSTLLKDLIN  156 (174)
Q Consensus       140 ~~----~~~~~g~t~l~~a~~  156 (174)
                      ..    ..+..|.++++.|+.
T Consensus       256 ~~~~~~~~~~~~~~~~~~a~y  276 (661)
T PHA02917        256 NTAYSYIDDLTCCTRGIMADY  276 (661)
T ss_pred             ccccccccCcccccchHHHHH
Confidence            22    356677888888874

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.81  E-value=4.5e-20  Score=129.10  Aligned_cols=132  Identities=13%  Similarity=0.111  Sum_probs=114.4

Q ss_pred             HHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHH
Q 036069           17 ILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSK   95 (174)
Q Consensus        17 ~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~   95 (174)
                      |+.|+.-.++.-++.. ..+.|.- +.-| +|||||++ .|+..+++.|+..+  +.++ ..+....||||+|+..|+.+
T Consensus         8 cregna~qvrlwld~t-ehdln~g-ddhgfsplhwaak-egh~aivemll~rg--arvn-~tnmgddtplhlaaahghrd   81 (448)
T KOG0195|consen    8 CREGNAFQVRLWLDDT-EHDLNVG-DDHGFSPLHWAAK-EGHVAIVEMLLSRG--ARVN-STNMGDDTPLHLAAAHGHRD   81 (448)
T ss_pred             hhcCCeEEEEEEecCc-ccccccc-cccCcchhhhhhh-cccHHHHHHHHhcc--cccc-cccCCCCcchhhhhhcccHH
Confidence            3444444444444444 4777744 7778 99999999 99999999999999  8888 88888889999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHH
Q 036069           96 LIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLI  155 (174)
Q Consensus        96 ~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~  155 (174)
                      ++..|++..++ ++..|..|.|||||||..|...+.+-|++.|+ ....++.|.||+..|.
T Consensus        82 ivqkll~~kad-vnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen   82 IVQKLLSRKAD-VNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             HHHHHHHHhcc-cchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence            99999999999 59999999999999999999999999999999 7889999999998764

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.81  E-value=1.2e-18  Score=111.01  Aligned_cols=123  Identities=20%  Similarity=0.265  Sum_probs=103.2

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+.+|.+||+.|+..++.++++.|++.+  ...+.. +..| +++|+|+. .++.+++++|++.+  ..++ ..+..|.+
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~--~~~~~~-~~~g~~~l~~a~~-~~~~~~~~~ll~~~--~~~~-~~~~~~~~   75 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENG--ADVNAK-DNDGRTPLHLAAK-NGHLEIVKLLLEKG--ADVN-ARDKDGNT   75 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcC--CCCCcc-CCCCCcHHHHHHH-cCCHHHHHHHHHcC--CCcc-ccCCCCCC
Confidence            3567889999999999999999999888  554544 6677 99999999 89999999999987  5666 77778889


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHH
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLL  135 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll  135 (174)
                      |+|+|+..++.+++++|++.+.. .+..+..+.||+++|...++.+++++|+
T Consensus        76 ~l~~a~~~~~~~~~~~L~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          76 PLHLAARNGNLDVVKLLLKHGAD-VNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            99999999999999999988876 4777888889999999998888888764

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PHA02730 ankyrin-like protein; Provisional

Probab=99.81  E-value=8e-19  Score=137.59  Aligned_cols=143  Identities=14%  Similarity=0.103  Sum_probs=118.3

Q ss_pred             HHHHHHHhC---CHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCC----HHHHHHHHhccchh--hhhhhcccCC
Q 036069           12 QVTRYILKN---DWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAP----PMFLDKLVSKVHQN--FLQEWVSNEG   81 (174)
Q Consensus        12 ~L~~A~~~g---~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~----~~~v~~Ll~~~~~~--~~~~~~d~~g   81 (174)
                      .|+.-...+   +.++++.|+++|  ++++..  ..| ||||+|+. .++    .+++++|++++  +  +++ .+|..|
T Consensus       346 ~l~~Y~~~~~~v~ieIvelLIs~G--AdIN~k--~~G~TpLH~Aa~-~nnn~i~~eIvelLIs~G--a~~dIN-~kd~~G  417 (672)
T PHA02730        346 MLINYLHYGDMVSIPILRCMLDNG--ATMDKT--TDNNYPLHDYFV-NNNNIVDVNVVRFIVENN--GHMAIN-HVSNNG  417 (672)
T ss_pred             HHHHHHhcCCcCcHHHHHHHHHCC--CCCCcC--CCCCcHHHHHHH-HcCCcchHHHHHHHHHcC--CCcccc-ccccCC
Confidence            678888866   589999999999  999954  567 99999988 764    89999999998  5  577 888999


Q ss_pred             chHHHH---HHhcC---------CHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCC-CC
Q 036069           82 NACMVH---AATGG---------KSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGH-DW  147 (174)
Q Consensus        82 ~~~l~~---A~~~~---------~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~-~g  147 (174)
                      .||||.   |...+         ..+++++|+.+|++ ++.+|..|.||||+|+..++.+++++|+++|+ ....+. .|
T Consensus       418 ~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GAD-INakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g  496 (672)
T PHA02730        418 RLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDD-IDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSII  496 (672)
T ss_pred             CchHhHHHHHHhccccccccchhHHHHHHHHHhcccc-hhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCC
Confidence            999984   33222         23569999999999 59999999999999999999999999999999 666765 59


Q ss_pred             cchHHHHHHc--Cccccc
Q 036069          148 STLLKDLINC--NLFGKY  163 (174)
Q Consensus       148 ~t~l~~a~~~--~~~~~~  163 (174)
                      .||++.|+..  ++.+++
T Consensus       497 ~TaL~~Aa~~~~~~~eIv  514 (672)
T PHA02730        497 NTAIQKSSYRRENKTKLV  514 (672)
T ss_pred             cCHHHHHHHhhcCcHHHH
Confidence            9999999863  444443

>PHA02730 ankyrin-like protein; Provisional

Probab=99.81  E-value=6.8e-19  Score=137.98  Aligned_cols=128  Identities=12%  Similarity=0.068  Sum_probs=108.4

Q ss_pred             cchhhHHHHHHHHhC---CHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCC--CHHHHHHHHhccchhhhhhhccc
Q 036069            6 DIDSVMQVTRYILKN---DWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDA--PPMFLDKLVSKVHQNFLQEWVSN   79 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g---~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g--~~~~v~~Ll~~~~~~~~~~~~d~   79 (174)
                      |.+|.||||.|+..|   +.++++.|+++|  ++++.. +..| ||||+|+. .+  +.+++++|++.+.-++.+ ..+.
T Consensus        38 d~~G~TaLh~A~~~~~~~~~eivklLLs~G--Adin~k-D~~G~TPLh~Aa~-~~~~~~eIv~~Ll~~~~~~~~~-~~~~  112 (672)
T PHA02730         38 DRRGNNALHCYVSNKCDTDIKIVRLLLSRG--VERLCR-NNEGLTPLGVYSK-RKYVKSQIVHLLISSYSNASNE-LTSN  112 (672)
T ss_pred             CCCCCcHHHHHHHcCCcCcHHHHHHHHhCC--CCCccc-CCCCCChHHHHHH-cCCCcHHHHHHHHhcCCCCCcc-cccc
Confidence            567999999999997   599999999999  999977 8888 99999998 77  799999999997213335 5666


Q ss_pred             CCchHHHHHHh--cCCHHHHHHHHH-hCCCCCCCCC-----CCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           80 EGNACMVHAAT--GGKSKLIEILMR-YNPNLPNVRD-----KSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        80 ~g~~~l~~A~~--~~~~~~~~~Ll~-~~~~~~~~~~-----~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      -+.+|+|.++.  .++.+++++|++ .+.+ ++...     ..|.+|++++...++.+++++|++.|+
T Consensus       113 ~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~-~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~  179 (672)
T PHA02730        113 INDFDLYSYMSSDNIDLRLLKYLIVDKRIR-PSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSEC  179 (672)
T ss_pred             cCCchHHHHHHhcCCcHHHHHHHHHhcCCC-hhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCC
Confidence            68899998887  889999999997 4455 35432     378999999999999999999999998

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.81  E-value=5.9e-19  Score=106.60  Aligned_cols=83  Identities=23%  Similarity=0.350  Sum_probs=41.8

Q ss_pred             HHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCC
Q 036069           48 FDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGH  127 (174)
Q Consensus        48 L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~  127 (174)
                      ||+|++ .|+.+++++|++.+  .+++ .    |.||+|+|+..|+.+++++|++.|++ ++.+|..|+||+|+|+..|+
T Consensus         1 L~~A~~-~~~~~~~~~ll~~~--~~~~-~----~~~~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~   71 (89)
T PF12796_consen    1 LHIAAQ-NGNLEILKFLLEKG--ADIN-L----GNTALHYAAENGNLEIVKLLLENGAD-INSQDKNGNTALHYAAENGN   71 (89)
T ss_dssp             HHHHHH-TTTHHHHHHHHHTT--STTT-S----SSBHHHHHHHTTTHHHHHHHHHTTTC-TT-BSTTSSBHHHHHHHTTH
T ss_pred             CHHHHH-cCCHHHHHHHHHCc--CCCC-C----CCCHHHHHHHcCCHHHHHHHHHhccc-ccccCCCCCCHHHHHHHcCC
Confidence            445555 55555555555544  3222 1    44555555555555555555555554 35555555555555555555


Q ss_pred             hHHHHHHHhcCC
Q 036069          128 RDTVRYLLSKTT  139 (174)
Q Consensus       128 ~~~~~~ll~~~~  139 (174)
                      .+++++|+++|+
T Consensus        72 ~~~~~~Ll~~g~   83 (89)
T PF12796_consen   72 LEIVKLLLEHGA   83 (89)
T ss_dssp             HHHHHHHHHTTT
T ss_pred             HHHHHHHHHcCC
Confidence            555555555544

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.80  E-value=6.8e-19  Score=106.34  Aligned_cols=88  Identities=11%  Similarity=0.166  Sum_probs=78.3

Q ss_pred             HHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhc
Q 036069           13 VTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATG   91 (174)
Q Consensus        13 L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~   91 (174)
                      ||.|++.|+.+++++|++.+  .+++.     | +|||+|+. .|+.+++++|++.+  .+++ .+|..|.||||+|+..
T Consensus         1 L~~A~~~~~~~~~~~ll~~~--~~~~~-----~~~~l~~A~~-~~~~~~~~~Ll~~g--~~~~-~~~~~g~t~L~~A~~~   69 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKG--ADINL-----GNTALHYAAE-NGNLEIVKLLLENG--ADIN-SQDKNGNTALHYAAEN   69 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTT--STTTS-----SSBHHHHHHH-TTTHHHHHHHHHTT--TCTT--BSTTSSBHHHHHHHT
T ss_pred             CHHHHHcCCHHHHHHHHHCc--CCCCC-----CCCHHHHHHH-cCCHHHHHHHHHhc--cccc-ccCCCCCCHHHHHHHc
Confidence            79999999999999999988  66653     6 99999999 99999999999999  8888 8999999999999999


Q ss_pred             CCHHHHHHHHHhCCCCCCCCC
Q 036069           92 GKSKLIEILMRYNPNLPNVRD  112 (174)
Q Consensus        92 ~~~~~~~~Ll~~~~~~~~~~~  112 (174)
                      ++.+++++|+++|++ ++.+|
T Consensus        70 ~~~~~~~~Ll~~g~~-~~~~n   89 (89)
T PF12796_consen   70 GNLEIVKLLLEHGAD-VNIRN   89 (89)
T ss_dssp             THHHHHHHHHHTTT--TTSS-
T ss_pred             CCHHHHHHHHHcCCC-CCCcC
Confidence            999999999999988 46654

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.80  E-value=2.1e-19  Score=134.22  Aligned_cols=145  Identities=17%  Similarity=0.105  Sum_probs=131.9

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHH
Q 036069           11 MQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAA   89 (174)
Q Consensus        11 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~   89 (174)
                      -.+..|+..|+.+.++.|+..+  +.++.. +..| |+||-+|. ..+.+||++|++++  ++++ ..|..|+||+|.|+
T Consensus        42 a~~l~A~~~~d~~ev~~ll~~g--a~~~~~-n~DglTalhq~~i-d~~~e~v~~l~e~g--a~Vn-~~d~e~wtPlhaaa  114 (527)
T KOG0505|consen   42 AVFLEACSRGDLEEVRKLLNRG--ASPNLC-NVDGLTALHQACI-DDNLEMVKFLVENG--ANVN-AQDNEGWTPLHAAA  114 (527)
T ss_pred             HHHHhccccccHHHHHHHhccC--CCcccc-CCccchhHHHHHh-cccHHHHHHHHHhc--CCcc-ccccccCCcchhhc
Confidence            3478899999999999999999  888744 9999 99999999 99999999999999  9999 99999999999999


Q ss_pred             hcCCHHHHHHHHHhCCCC----------------------------------------------------------CCCC
Q 036069           90 TGGKSKLIEILMRYNPNL----------------------------------------------------------PNVR  111 (174)
Q Consensus        90 ~~~~~~~~~~Ll~~~~~~----------------------------------------------------------~~~~  111 (174)
                      ..|+..++++|+.+|+++                                                          .+..
T Consensus       115 scg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~  194 (527)
T KOG0505|consen  115 SCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDAR  194 (527)
T ss_pred             ccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhcccccccc
Confidence            999999999999998876                                                          5556


Q ss_pred             CCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccc
Q 036069          112 DKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGK  162 (174)
Q Consensus       112 ~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~  162 (174)
                      +..|-|.+|+|+..|..++.++|+..|. ...+|.+|+||||.|+.-|..++
T Consensus       195 ~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~  246 (527)
T KOG0505|consen  195 HARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDA  246 (527)
T ss_pred             ccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhH
Confidence            6669999999999999999999999999 78899999999999987666544

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.80  E-value=9.3e-20  Score=140.85  Aligned_cols=152  Identities=16%  Similarity=0.107  Sum_probs=135.4

Q ss_pred             cccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCc
Q 036069            4 ITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGN   82 (174)
Q Consensus         4 ~~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~   82 (174)
                      .+|++|.|.||.|+.+|+...++.|++..  +-++.. +..| +|||+|+. .|+.++++.++.+.  ..++ ..+..|.
T Consensus        44 ~qd~~gfTalhha~Lng~~~is~llle~e--a~ldl~-d~kg~~plhlaaw-~g~~e~vkmll~q~--d~~n-a~~~e~~  116 (854)
T KOG0507|consen   44 LQDYSGFTLLHHAVLNGQNQISKLLLDYE--ALLDLC-DTKGILPLHLAAW-NGNLEIVKMLLLQT--DILN-AVNIENE  116 (854)
T ss_pred             ccCccchhHHHHHHhcCchHHHHHHhcch--hhhhhh-hccCcceEEehhh-cCcchHHHHHHhcc--cCCC-cccccCc
Confidence            46789999999999999999999999998  667645 7888 99999999 99999999999998  7677 8888999


Q ss_pred             hHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC---------CcccCCCCcchHHH
Q 036069           83 ACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT---------AHLDGHDWSTLLKD  153 (174)
Q Consensus        83 ~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~---------~~~~~~~g~t~l~~  153 (174)
                      +|||.|++.|+.+++.+|+.++++ +.++|.++.|++-.|++.|+.++++.|+...-         .+.+...+.+|||.
T Consensus       117 tplhlaaqhgh~dvv~~Ll~~~ad-p~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHl  195 (854)
T KOG0507|consen  117 TPLHLAAQHGHLEVVFYLLKKNAD-PFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHL  195 (854)
T ss_pred             CccchhhhhcchHHHHHHHhcCCC-ccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcch
Confidence            999999999999999999999999 68999999999999999999999999987511         11255678899999


Q ss_pred             HHHcCccccc
Q 036069          154 LINCNLFGKY  163 (174)
Q Consensus       154 a~~~~~~~~~  163 (174)
                      |.++|+.+++
T Consensus       196 aakngh~~~~  205 (854)
T KOG0507|consen  196 AAKNGHVECM  205 (854)
T ss_pred             hhhcchHHHH
Confidence            9999998876

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.80  E-value=3e-19  Score=144.76  Aligned_cols=116  Identities=13%  Similarity=0.018  Sum_probs=92.7

Q ss_pred             Cc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcc--------------cCCchHHHHHHhcCCHHHHHHHHHhCCCCC
Q 036069           44 GL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVS--------------NEGNACMVHAATGGKSKLIEILMRYNPNLP  108 (174)
Q Consensus        44 ~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d--------------~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~  108 (174)
                      .| ||||+|+. .|+.++++.|++.+  ++++ .++              ..|.+|||.|+..|+.+++++|++.+++ +
T Consensus       127 ~G~TpLhlAa~-~~~~eiVklLL~~G--Adv~-~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gad-i  201 (743)
T TIGR00870       127 PGITALHLAAH-RQNYEIVKLLLERG--ASVP-ARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPAD-I  201 (743)
T ss_pred             CCCcHHHHHHH-hCCHHHHHHHHhCC--CCCC-cCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcc-h
Confidence            47 99999999 99999999999988  6555 432              2488999999999999999999999988 5


Q ss_pred             CCCCCCCccHHHHHHhcC---------ChHHHHHHHhcCC-C-------cccCCCCcchHHHHHHcCcccccc
Q 036069          109 NVRDKSKLLPIHKAAQLG---------HRDTVRYLLSKTT-A-------HLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       109 ~~~~~~~~tpl~~a~~~~---------~~~~~~~ll~~~~-~-------~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      +.+|..|+||+|+|+..+         ...+.+++++.++ .       ...|.+|.|||+.|+..|+.+++.
T Consensus       202 n~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~  274 (743)
T TIGR00870       202 LTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFR  274 (743)
T ss_pred             hhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHH
Confidence            888999999999999876         2345566665544 1       336889999999999998877663

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.79  E-value=1.4e-18  Score=140.86  Aligned_cols=143  Identities=15%  Similarity=0.096  Sum_probs=95.6

Q ss_pred             cchhhHHHH-HHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhcc---chh-----hhhh
Q 036069            6 DIDSVMQVT-RYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKV---HQN-----FLQE   75 (174)
Q Consensus         6 ~~~~~~~L~-~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~---~~~-----~~~~   75 (174)
                      |..|.|||| .|+.+++.++++.|++.+  +    . +..| ||||.|+. . ..+.++.++...   .+.     ...+
T Consensus        49 d~~G~t~Lh~~A~~~~~~eiv~lLl~~g--~----~-~~~G~T~Lh~A~~-~-~~~~v~~ll~~l~~~~~~~~~~~~~~~  119 (743)
T TIGR00870        49 DRLGRSALFVAAIENENLELTELLLNLS--C----R-GAVGDTLLHAISL-E-YVDAVEAILLHLLAAFRKSGPLELAND  119 (743)
T ss_pred             CccchhHHHHHHHhcChHHHHHHHHhCC--C----C-CCcChHHHHHHHh-c-cHHHHHHHHHHHhhcccccCchhhhcc
Confidence            344666666 555555556666555555  2    1 3444 66665554 2 222222222211   000     0000


Q ss_pred             ---hcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCC--------------CCCccHHHHHHhcCChHHHHHHHhcC
Q 036069           76 ---WVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRD--------------KSKLLPIHKAAQLGHRDTVRYLLSKT  138 (174)
Q Consensus        76 ---~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~--------------~~~~tpl~~a~~~~~~~~~~~ll~~~  138 (174)
                         ..+..|.||||+|+..|+.+++++|++.|+++ +.++              ..|.||++.|+..|+.+++++|++.|
T Consensus       120 ~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv-~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~g  198 (743)
T TIGR00870       120 QYTSEFTPGITALHLAAHRQNYEIVKLLLERGASV-PARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDP  198 (743)
T ss_pred             ccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCC-CcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCC
Confidence               11235899999999999999999999999884 6432              35889999999999999999999998


Q ss_pred             C-CcccCCCCcchHHHHHHcC
Q 036069          139 T-AHLDGHDWSTLLKDLINCN  158 (174)
Q Consensus       139 ~-~~~~~~~g~t~l~~a~~~~  158 (174)
                      + .+.++..|.||||.|+..+
T Consensus       199 adin~~d~~g~T~Lh~A~~~~  219 (743)
T TIGR00870       199 ADILTADSLGNTLLHLLVMEN  219 (743)
T ss_pred             cchhhHhhhhhHHHHHHHhhh
Confidence            8 5668889999999999876

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.76  E-value=2e-18  Score=133.67  Aligned_cols=153  Identities=18%  Similarity=0.155  Sum_probs=132.1

Q ss_pred             hHHHHHHHHhCCHHHHHHHHHcCC-----------CccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhc
Q 036069           10 VMQVTRYILKNDWKDLEEYIMSKT-----------SNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWV   77 (174)
Q Consensus        10 ~~~L~~A~~~g~~~~~~~ll~~~~-----------~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~   77 (174)
                      .+-+.-|++.|+.+.+..+|+...           +...+.+ +..+ |+||.|+. .|+.++++.|++..  +.+. ..
T Consensus         4 ~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~q-d~~gfTalhha~L-ng~~~is~llle~e--a~ld-l~   78 (854)
T KOG0507|consen    4 KQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQ-DYSGFTLLHHAVL-NGQNQISKLLLDYE--ALLD-LC   78 (854)
T ss_pred             hhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCcccccc-CccchhHHHHHHh-cCchHHHHHHhcch--hhhh-hh
Confidence            345778999999999999987531           1123323 4567 99999999 99999999999998  7788 88


Q ss_pred             ccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHH
Q 036069           78 SNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLIN  156 (174)
Q Consensus        78 d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~  156 (174)
                      |..|.+|||+|++.|+.++++.|+..+.. ++..+..|.||||.|+++||.+++.+|+.+++ .-..+.++.|++.+|++
T Consensus        79 d~kg~~plhlaaw~g~~e~vkmll~q~d~-~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~q  157 (854)
T KOG0507|consen   79 DTKGILPLHLAAWNGNLEIVKMLLLQTDI-LNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASR  157 (854)
T ss_pred             hccCcceEEehhhcCcchHHHHHHhcccC-CCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHH
Confidence            98899999999999999999999999876 59999999999999999999999999999999 55599999999999999


Q ss_pred             cCcccccccccc
Q 036069          157 CNLFGKYYSAEP  168 (174)
Q Consensus       157 ~~~~~~~~~~~~  168 (174)
                      .|..+++.-+..
T Consensus       158 fgr~~Vvq~ll~  169 (854)
T KOG0507|consen  158 FGRAEVVQMLLQ  169 (854)
T ss_pred             hhhhHHHHHHhh
Confidence            999888755443

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.76  E-value=6e-18  Score=110.16  Aligned_cols=116  Identities=12%  Similarity=0.040  Sum_probs=101.2

Q ss_pred             cccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCc
Q 036069            4 ITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGN   82 (174)
Q Consensus         4 ~~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~   82 (174)
                      .+|.+|+||||.|+.+|+.++++.|+..|  ++++.+ ...| ||||-||. ..+.+++..|+.++  ++++ .......
T Consensus        92 trD~D~YTpLHRAaYn~h~div~~ll~~g--An~~a~-T~~GWTPLhSAck-WnN~~va~~LLqhg--aDVn-A~t~g~l  164 (228)
T KOG0512|consen   92 TRDEDEYTPLHRAAYNGHLDIVHELLLSG--ANKEAK-TNEGWTPLHSACK-WNNFEVAGRLLQHG--ADVN-AQTKGLL  164 (228)
T ss_pred             ccccccccHHHHHHhcCchHHHHHHHHcc--CCcccc-cccCccchhhhhc-ccchhHHHHHHhcc--Cccc-ccccccc
Confidence            35789999999999999999999999999  999977 5566 99999999 99999999999999  9999 8888899


Q ss_pred             hHHHHHHhcCC-HHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcC
Q 036069           83 ACMVHAATGGK-SKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLG  126 (174)
Q Consensus        83 ~~l~~A~~~~~-~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~  126 (174)
                      ||||+||...+ ...+++|+......+...+..+.||+.+|-+-+
T Consensus       165 tpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  165 TPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             hhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence            99999997765 456788877654446778889999999998854

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.76  E-value=6e-18  Score=121.53  Aligned_cols=126  Identities=15%  Similarity=0.171  Sum_probs=111.7

Q ss_pred             cchhhHHHHHHHHh-----CCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhccc
Q 036069            6 DIDSVMQVTRYILK-----NDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSN   79 (174)
Q Consensus         6 ~~~~~~~L~~A~~~-----g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~   79 (174)
                      +.-|+||+++++..     .+.++|..|+..|   ++|.+...-| |+|++|+. +|+.++|+.||.-+  ++++ .+|.
T Consensus       299 NrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg---nVNaKAsQ~gQTALMLAVS-HGr~d~vk~LLacg--AdVN-iQDd  371 (452)
T KOG0514|consen  299 NRAGYTPVMLAALAKLKQPADRTVVERLFKMG---DVNAKASQHGQTALMLAVS-HGRVDMVKALLACG--ADVN-IQDD  371 (452)
T ss_pred             ccccccHHHHHHHHhhcchhhHHHHHHHHhcc---Ccchhhhhhcchhhhhhhh-cCcHHHHHHHHHcc--CCCc-cccC
Confidence            34599999988873     4677999999998   8888877888 99999999 99999999999999  9999 9999


Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcC
Q 036069           80 EGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKT  138 (174)
Q Consensus        80 ~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~  138 (174)
                      +|.|+|++||..||.+++++|+..........|.+|-|+|++|...||.|+.-+|..+-
T Consensus       372 DGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~~  430 (452)
T KOG0514|consen  372 DGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAHM  430 (452)
T ss_pred             CccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHHHH
Confidence            99999999999999999999998643335788999999999999999999988887653

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.75  E-value=7.8e-18  Score=131.33  Aligned_cols=126  Identities=14%  Similarity=0.192  Sum_probs=112.8

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccC----------------------Cc-cHHHHHHhhCCCHHHHH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITG----------------------GL-SIFDLIVNSDAPPMFLD   62 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~----------------------~~-t~L~~A~~~~g~~~~v~   62 (174)
                      .+.|.||||+|+.+.+.++|+.|++.|  ++++.++..                      .| .||..|+. .++.++++
T Consensus       181 eY~GqSaLHiAIv~~~~~~V~lLl~~g--ADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC-~nq~eivr  257 (782)
T KOG3676|consen  181 EYYGQSALHIAIVNRDAELVRLLLAAG--ADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAAC-TNQPEIVR  257 (782)
T ss_pred             hhcCcchHHHHHHhccHHHHHHHHHcC--CchhhHhhccccCcccccccccccCCcceeeeccCchHHHHH-cCCHHHHH
Confidence            457999999999999999999999999  998876321                      14 69999999 99999999


Q ss_pred             HHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCC-CCCCCCCCCccHHHHHHhcCChHHHHHHHhc
Q 036069           63 KLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPN-LPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK  137 (174)
Q Consensus        63 ~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~  137 (174)
                      +|++++  ++++ .+|..|+|.||..+..-..++..++++.|+. +...+|..|-|||.+|+..|..+++++++++
T Consensus       258 lLl~~g--Ad~~-aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  258 LLLAHG--ADPN-AQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             HHHhcC--CCCC-ccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            999999  8888 9999999999999998888999999999887 2268899999999999999999999999998

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.75  E-value=4.3e-17  Score=103.76  Aligned_cols=117  Identities=21%  Similarity=0.234  Sum_probs=104.6

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHH
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIH  120 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~  120 (174)
                      +..| ||||+|+. .++.+++++|++.+  .... ..+..|.+|+|.|+..++.+++++|++.+.. ++..+..+.||+|
T Consensus         4 ~~~g~t~l~~a~~-~~~~~~i~~li~~~--~~~~-~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~-~~~~~~~~~~~l~   78 (126)
T cd00204           4 DEDGRTPLHLAAS-NGHLEVVKLLLENG--ADVN-AKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD-VNARDKDGNTPLH   78 (126)
T ss_pred             CcCCCCHHHHHHH-cCcHHHHHHHHHcC--CCCC-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHH
Confidence            4567 99999999 99999999999998  5555 7888999999999999999999999999987 4788889999999


Q ss_pred             HHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069          121 KAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       121 ~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      +|+..++.+++++|++++. .+..+..|.||++.|+..+..+++
T Consensus        79 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  122 (126)
T cd00204          79 LAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVV  122 (126)
T ss_pred             HHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHH
Confidence            9999999999999999986 556778899999999998776654

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.75  E-value=1.1e-17  Score=130.43  Aligned_cols=155  Identities=10%  Similarity=0.031  Sum_probs=130.9

Q ss_pred             chhhHHHHHHHHh---CCHHHHHHHHHcCCCccccccccC---Cc-cHHHHHHhhCCCHHHHHHHHhccchhhhhh----
Q 036069            7 IDSVMQVTRYILK---NDWKDLEEYIMSKTSNTLTDKITG---GL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQE----   75 (174)
Q Consensus         7 ~~~~~~L~~A~~~---g~~~~~~~ll~~~~~~~~~~~~~~---~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~----   75 (174)
                      .-|.|.||.|..+   ++-++++.|++.. |.-+|..+.+   .| ||||+|+. +.+.++|++|++.+  ++++.    
T Consensus       141 a~GET~Lh~~lL~~~~~~n~la~~LL~~~-p~lind~~~~eeY~GqSaLHiAIv-~~~~~~V~lLl~~g--ADV~aRa~G  216 (782)
T KOG3676|consen  141 ATGETLLHKALLNLSDGHNELARVLLEIF-PKLINDIYTSEEYYGQSALHIAIV-NRDAELVRLLLAAG--ADVHARACG  216 (782)
T ss_pred             chhhhHHHHHHhcCchhHHHHHHHHHHHh-HHHhhhhhhhHhhcCcchHHHHHH-hccHHHHHHHHHcC--CchhhHhhc
Confidence            4599999999983   3458999999988 6666654333   47 99999999 99999999999999  77662    


Q ss_pred             ----hcc--------------cCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhc
Q 036069           76 ----WVS--------------NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK  137 (174)
Q Consensus        76 ----~~d--------------~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~  137 (174)
                          ..|              .-|..||-.||.-++.+|+++|++++++ ++.+|..|+|.||..+.+-..+|..+++..
T Consensus       217 ~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd-~~aqDS~GNTVLH~lVi~~~~~My~~~L~~  295 (782)
T KOG3676|consen  217 AFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGAD-PNAQDSNGNTVLHMLVIHFVTEMYDLALEL  295 (782)
T ss_pred             cccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCC-CCccccCCChHHHHHHHHHHHHHHHHHHhc
Confidence                011              1378999999999999999999999999 699999999999999999889999999999


Q ss_pred             CCC--c-ccCCCCcchHHHHHHcCcccccccc
Q 036069          138 TTA--H-LDGHDWSTLLKDLINCNLFGKYYSA  166 (174)
Q Consensus       138 ~~~--~-~~~~~g~t~l~~a~~~~~~~~~~~~  166 (174)
                      |+.  . ..|..|.|||.+|++.|.-++..++
T Consensus       296 ga~~l~~v~N~qgLTPLtLAaklGk~emf~~i  327 (782)
T KOG3676|consen  296 GANALEHVRNNQGLTPLTLAAKLGKKEMFQHI  327 (782)
T ss_pred             CCCccccccccCCCChHHHHHHhhhHHHHHHH
Confidence            995  3 3899999999999999987765443

>PHA02792 ankyrin-like protein; Provisional

Probab=99.74  E-value=1e-16  Score=124.83  Aligned_cols=136  Identities=11%  Similarity=0.028  Sum_probs=116.8

Q ss_pred             HHHHHHHHhC--CHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCC--chHH
Q 036069           11 MQVTRYILKN--DWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEG--NACM   85 (174)
Q Consensus        11 ~~L~~A~~~g--~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g--~~~l   85 (174)
                      ..||.-...+  +.++++.|++.|  ++..   .... .+++.|+. .|+.+++++|+++|  ++++ .+|..|  .|||
T Consensus       308 ~~l~~Yl~~~~v~ieiIK~LId~G--a~~~---r~~~~n~~~~Aa~-~gn~eIVelLIs~G--ADIN-~kD~~g~~~TpL  378 (631)
T PHA02792        308 DLLSEYVSYHTVYINVIKCMIDEG--ATLY---RFKHINKYFQKFD-NRDPKVVEYILKNG--NVVV-EDDDNIINIMPL  378 (631)
T ss_pred             HHHHHHHhcCCccHHHHHHHHHCC--Cccc---cCCcchHHHHHHH-cCCHHHHHHHHHcC--Cchh-hhcCCCCChhHH
Confidence            3477777877  688999999999  7654   2234 77899999 99999999999999  8888 888764  6999


Q ss_pred             HHHHhcCCH---HHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHH
Q 036069           86 VHAATGGKS---KLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLIN  156 (174)
Q Consensus        86 ~~A~~~~~~---~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~  156 (174)
                      |+|+.....   +++++|+.+|++ ++.+|..|.||||+|+..++.+++++|++.|+ .+.++..|.|||+.|+.
T Consensus       379 h~A~~n~~~~v~~IlklLIs~GAD-IN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        379 FPTLSIHESDVLSILKLCKPYIDD-INKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI  452 (631)
T ss_pred             HHHHHhccHhHHHHHHHHHhcCCc-cccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            998776654   458889999999 59999999999999999999999999999999 67799999999999975

>PHA02792 ankyrin-like protein; Provisional

Probab=99.72  E-value=5.4e-17  Score=126.34  Aligned_cols=146  Identities=16%  Similarity=0.108  Sum_probs=106.6

Q ss_pred             chhhHHHHHHHHhCCH-HHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            7 IDSVMQVTRYILKNDW-KDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~-~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      .++.||||.-.-+.+. ..++.++.-+  ..++.. +-.+ +++|+-+...|+.|++++|+++|  ++++ .++..+.+|
T Consensus        35 ~~~~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-n~~~~~~~~~~~s~n~~lElvk~LI~~G--AdvN-~~~n~~~~~  108 (631)
T PHA02792         35 YDGETPLKAYVTKKNNNIKNDVVILLL--SSVDYK-NINDFDIFEYLCSDNIDIELLKLLISKG--LEIN-SIKNGINIV  108 (631)
T ss_pred             cCCCccHHHHHhhhhhhHHHHHHHHHH--hCCCcC-ccCCccHHHHHHHhcccHHHHHHHHHcC--CCcc-cccCCCCcc
Confidence            4567888877665553 2334444444  444444 5566 78876444378888888888888  7777 777777788


Q ss_pred             HHHHHh-cCCHHHHHHHHHhCCCC-----------------------------------CCCCCCCCccHHHHHHhcC--
Q 036069           85 MVHAAT-GGKSKLIEILMRYNPNL-----------------------------------PNVRDKSKLLPIHKAAQLG--  126 (174)
Q Consensus        85 l~~A~~-~~~~~~~~~Ll~~~~~~-----------------------------------~~~~~~~~~tpl~~a~~~~--  126 (174)
                      +|+|+. .++.+++++|++.|++.                                   .+..+..|.||||+++..+  
T Consensus       109 l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~  188 (631)
T PHA02792        109 EKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQ  188 (631)
T ss_pred             eeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCc
Confidence            888865 58888888888887652                                   2355667889999999988  


Q ss_pred             -----ChHHHHHHHhcCC-CcccCCCCcchHHHHHHcC
Q 036069          127 -----HRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCN  158 (174)
Q Consensus       127 -----~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~  158 (174)
                           +.++++.|+++|+ ....+..|.||||+|+.+.
T Consensus       189 ~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~  226 (631)
T PHA02792        189 DGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKC  226 (631)
T ss_pred             ccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcc
Confidence                 7899999999998 6667778999999999887

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.68  E-value=2.3e-16  Score=92.38  Aligned_cols=102  Identities=12%  Similarity=0.135  Sum_probs=76.7

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHH
Q 036069           11 MQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAA   89 (174)
Q Consensus        11 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~   89 (174)
                      ..+.+++++|.++.|+..+..|  .+++.. - ++ +|||+|+- .|+.+++++|+..+  ++++ .+|+.|.|||-.|+
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g--~nVn~~-~-ggR~plhyAAD-~GQl~ilefli~iG--A~i~-~kDKygITPLLsAv   75 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEG--LNVNEI-Y-GGRTPLHYAAD-YGQLSILEFLISIG--ANIQ-DKDKYGITPLLSAV   75 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHcc--ccHHHH-h-CCcccchHhhh-cchHHHHHHHHHhc--cccC-CccccCCcHHHHHH
Confidence            3466778888888888888877  677644 2 45 88888888 88888888888888  7777 78888888888888


Q ss_pred             hcCCHHHHHHHHHhCCCCCCCCCCCCccHHHH
Q 036069           90 TGGKSKLIEILMRYNPNLPNVRDKSKLLPIHK  121 (174)
Q Consensus        90 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~  121 (174)
                      ..||.+|+++|++.|++. .....+|.+.+.-
T Consensus        76 wEGH~~cVklLL~~GAdr-t~~~PdG~~~~ea  106 (117)
T KOG4214|consen   76 WEGHRDCVKLLLQNGADR-TIHAPDGTALIEA  106 (117)
T ss_pred             HHhhHHHHHHHHHcCccc-ceeCCCchhHHhh
Confidence            888888888888888773 6666666655443

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.67  E-value=5.5e-16  Score=90.83  Aligned_cols=102  Identities=22%  Similarity=0.240  Sum_probs=89.1

Q ss_pred             HHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcC
Q 036069           47 IFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLG  126 (174)
Q Consensus        47 ~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~  126 (174)
                      -+.|++. .|..+-|+-.+..+  .+++  .-..|++|||+||.+|+.+++++|+..|++ ++.+|..|.|||..|.-.|
T Consensus         5 ~~~W~vk-NG~~DeVk~~v~~g--~nVn--~~~ggR~plhyAAD~GQl~ilefli~iGA~-i~~kDKygITPLLsAvwEG   78 (117)
T KOG4214|consen    5 SVAWNVK-NGEIDEVKQSVNEG--LNVN--EIYGGRTPLHYAADYGQLSILEFLISIGAN-IQDKDKYGITPLLSAVWEG   78 (117)
T ss_pred             hHhhhhc-cCcHHHHHHHHHcc--ccHH--HHhCCcccchHhhhcchHHHHHHHHHhccc-cCCccccCCcHHHHHHHHh
Confidence            4678899 99999998888877  5665  233799999999999999999999999999 5999999999999999999


Q ss_pred             ChHHHHHHHhcCC-CcccCCCCcchHHHH
Q 036069          127 HRDTVRYLLSKTT-AHLDGHDWSTLLKDL  154 (174)
Q Consensus       127 ~~~~~~~ll~~~~-~~~~~~~g~t~l~~a  154 (174)
                      |.+||++|+..|+ ...+..+|.+.+..+
T Consensus        79 H~~cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   79 HRDCVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             hHHHHHHHHHcCcccceeCCCchhHHhhc
Confidence            9999999999999 666788888876543

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.67  E-value=1.5e-15  Score=106.41  Aligned_cols=126  Identities=13%  Similarity=0.090  Sum_probs=113.4

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHH
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACM   85 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l   85 (174)
                      .....||..++-+|+.+.+..||+.-  ..++.. |..| ++|..|+. .|+.++++.|++.+  ++++.-++..++|||
T Consensus        10 d~~~~~Lle~i~Kndt~~a~~LLs~v--r~vn~~-D~sGMs~LahAay-kGnl~~v~lll~~g--aDvN~~qhg~~YTpL   83 (396)
T KOG1710|consen   10 DAPKSPLLEAIDKNDTEAALALLSTV--RQVNQR-DPSGMSVLAHAAY-KGNLTLVELLLELG--ADVNDKQHGTLYTPL   83 (396)
T ss_pred             cchhhHHHHHHccCcHHHHHHHHHHh--hhhhcc-CCCcccHHHHHHh-cCcHHHHHHHHHhC--CCcCcccccccccHH
Confidence            35678999999999999999999986  678866 9999 99999999 99999999999999  888844566799999


Q ss_pred             HHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           86 VHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        86 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      |.||.+|+.++.++|++.|+. +...|.-|+|+-.+|+..|+-++|..+-++-.
T Consensus        84 mFAALSGn~dvcrllldaGa~-~~~vNsvgrTAaqmAAFVG~H~CV~iINN~~t  136 (396)
T KOG1710|consen   84 MFAALSGNQDVCRLLLDAGAR-MYLVNSVGRTAAQMAAFVGHHECVAIINNHIT  136 (396)
T ss_pred             HHHHHcCCchHHHHHHhccCc-cccccchhhhHHHHHHHhcchHHHHHHhcccc
Confidence            999999999999999999999 59999999999999999999999998865544

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.66  E-value=1.5e-15  Score=106.09  Aligned_cols=123  Identities=20%  Similarity=0.248  Sum_probs=96.0

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCC-----HHHHHHHHhccchh---hhhhhcc
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAP-----PMFLDKLVSKVHQN---FLQEWVS   78 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~-----~~~v~~Ll~~~~~~---~~~~~~d   78 (174)
                      .+.++++.++..++.+.++.++..+  .+++.. +..| |+||+|+. .++     .++++.|++.+  +   ... .+|
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~-~~~g~t~l~~a~~-~~~~~~~~~~~~~~ll~~g--~~~~~~~-~~~  144 (235)
T COG0666          72 DGRLPLHSAASKGDDKIVKLLLASG--ADVNAK-DADGDTPLHLAAL-NGNPPEGNIEVAKLLLEAG--ADLDVNN-LRD  144 (235)
T ss_pred             cccCHHHHHHHcCcHHHHHHHHHcC--CCcccc-cCCCCcHHHHHHh-cCCcccchHHHHHHHHHcC--CCCCCcc-ccC
Confidence            3677888888888888888888887  777644 7777 88888888 888     78888888887  5   444 557


Q ss_pred             cCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcC
Q 036069           79 NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKT  138 (174)
Q Consensus        79 ~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~  138 (174)
                      ..|.||+|+|+..|+.++++.|++.+++ ++..+..|.|+++.|+..++.++++.++..+
T Consensus       145 ~~g~tpl~~A~~~~~~~~~~~ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         145 EDGNTPLHWAALNGDADIVELLLEAGAD-PNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCCCchhHHHHHcCchHHHHHHHhcCCC-CcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            7788888888888888888888888877 4777778888888888888888888877754

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.65  E-value=7.3e-16  Score=115.59  Aligned_cols=121  Identities=9%  Similarity=0.040  Sum_probs=104.3

Q ss_pred             hhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHH
Q 036069            9 SVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVH   87 (174)
Q Consensus         9 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~   87 (174)
                      ..-.|.-|+..|.++.|+..+..-  .++... +..| |+||-|+. .||.++|++|++.+  ++++ ..|.+|+||||+
T Consensus       550 PLaLLLDaaLeGEldlVq~~i~ev--~DpSqp-NdEGITaLHNAiC-aghyeIVkFLi~~g--anVN-a~DSdGWTPLHC  622 (752)
T KOG0515|consen  550 PLALLLDAALEGELDLVQRIIYEV--TDPSQP-NDEGITALHNAIC-AGHYEIVKFLIEFG--ANVN-AADSDGWTPLHC  622 (752)
T ss_pred             hHHHHHhhhhcchHHHHHHHHHhh--cCCCCC-CccchhHHhhhhh-cchhHHHHHHHhcC--Cccc-CccCCCCchhhh
Confidence            334467789999999999999887  677644 8889 99999999 99999999999999  9999 999999999999


Q ss_pred             HHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHh--cCChHHHHHHHh
Q 036069           88 AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQ--LGHRDTVRYLLS  136 (174)
Q Consensus        88 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~--~~~~~~~~~ll~  136 (174)
                      ||..++..+++.|++.|+.+.-..-.++.|+...+-.  .|..+|.+||..
T Consensus       623 AASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  623 AASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             hhhcCchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            9999999999999999988644555677888877654  478889999864

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.60  E-value=3.2e-14  Score=99.30  Aligned_cols=120  Identities=17%  Similarity=0.129  Sum_probs=108.0

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCC-----HHHHHHHHHhCC--CCCCCCCC
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGK-----SKLIEILMRYNP--NLPNVRDK  113 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~-----~~~~~~Ll~~~~--~~~~~~~~  113 (174)
                      +... ++++.++. .+...++++++..+  .+++ .++..|.||+|+|+..++     .++++.|++.++  ...+.+|.
T Consensus        70 ~~~~~~~~~~~~~-~~~~~~~~~l~~~~--~~~~-~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~  145 (235)
T COG0666          70 DLDGRLPLHSAAS-KGDDKIVKLLLASG--ADVN-AKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDE  145 (235)
T ss_pred             CccccCHHHHHHH-cCcHHHHHHHHHcC--CCcc-cccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCC
Confidence            3345 99999999 99999999999998  7777 999999999999999999     999999999999  44577799


Q ss_pred             CCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccccc
Q 036069          114 SKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYYS  165 (174)
Q Consensus       114 ~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~  165 (174)
                      .|.||+|+|+..|+.+++++|++.++ ....+..|.|+++.|+..+..+++..
T Consensus       146 ~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~  198 (235)
T COG0666         146 DGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKL  198 (235)
T ss_pred             CCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHH
Confidence            99999999999999999999999999 67788999999999999988766543

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.59  E-value=1e-14  Score=116.76  Aligned_cols=104  Identities=15%  Similarity=0.189  Sum_probs=91.5

Q ss_pred             HHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcC
Q 036069           47 IFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLG  126 (174)
Q Consensus        47 ~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~  126 (174)
                      .|+.|+. .|+.+.++.|++.+  ++++ .+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|
T Consensus        85 ~L~~aa~-~G~~~~vk~LL~~G--adin-~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad-vn~~d~~G~TpLh~A~~~g  159 (664)
T PTZ00322         85 ELCQLAA-SGDAVGARILLTGG--ADPN-CRDYDGRTPLHIACANGHVQVVRVLLEFGAD-PTLLDKDGKTPLELAEENG  159 (664)
T ss_pred             HHHHHHH-cCCHHHHHHHHHCC--CCCC-CcCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCC
Confidence            4788999 99999999999999  8888 8999999999999999999999999999999 5999999999999999999


Q ss_pred             ChHHHHHHHhc-------CC-CcccCCCCcchHHHHH
Q 036069          127 HRDTVRYLLSK-------TT-AHLDGHDWSTLLKDLI  155 (174)
Q Consensus       127 ~~~~~~~ll~~-------~~-~~~~~~~g~t~l~~a~  155 (174)
                      +.+++++|+.+       ++ ....+..|.+++....
T Consensus       160 ~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        160 FREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             cHHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            99999999998       44 3345666767665443

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.59  E-value=5.3e-15  Score=80.73  Aligned_cols=54  Identities=30%  Similarity=0.523  Sum_probs=35.5

Q ss_pred             CchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHH
Q 036069           81 GNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLL  135 (174)
Q Consensus        81 g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll  135 (174)
                      |.||+|+|+..|+.+++++|++.+.+ ++.+|..|.||+|+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~d-in~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGAD-INAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSG-TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            56777777777777777777777776 4777777777777777777777777764

...

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.57  E-value=2.3e-14  Score=114.70  Aligned_cols=105  Identities=9%  Similarity=0.060  Sum_probs=93.8

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHH
Q 036069           11 MQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAA   89 (174)
Q Consensus        11 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~   89 (174)
                      ..|+.|+..|+.+.++.|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+  ++++ .+|..|.||||+|+
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~G--adin~~-d~~G~TpLh~Aa~-~g~~eiv~~LL~~G--advn-~~d~~G~TpLh~A~  156 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGG--ADPNCR-DYDGRTPLHIACA-NGHVQVVRVLLEFG--ADPT-LLDKDGKTPLELAE  156 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCC--CCCCCc-CCCCCcHHHHHHH-CCCHHHHHHHHHCC--CCCC-CCCCCCCCHHHHHH
Confidence            4588999999999999999999  899977 8888 99999999 99999999999999  8888 99999999999999


Q ss_pred             hcCCHHHHHHHHHh-------CCCCCCCCCCCCccHHHHHH
Q 036069           90 TGGKSKLIEILMRY-------NPNLPNVRDKSKLLPIHKAA  123 (174)
Q Consensus        90 ~~~~~~~~~~Ll~~-------~~~~~~~~~~~~~tpl~~a~  123 (174)
                      ..|+.+++++|+++       +++ .+..+..|.+|+..+.
T Consensus       157 ~~g~~~iv~~Ll~~~~~~~~~ga~-~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        157 ENGFREVVQLLSRHSQCHFELGAN-AKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HCCcHHHHHHHHhCCCcccccCCC-CCccccCCCCccchhh
Confidence            99999999999998       666 4667777777765544

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.56  E-value=3e-15  Score=120.65  Aligned_cols=156  Identities=12%  Similarity=0.096  Sum_probs=124.3

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHH
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMV   86 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~   86 (174)
                      .|-.||.+|..+|+.+..+.||+.|  .++|..+.... |+|-+|+. .|..+.+..||...  +.+. .+.+.|.|||+
T Consensus       891 lgisPLmlatmngh~~at~~ll~~g--sdiNaqIeTNrnTaltla~f-qgr~evv~lLLa~~--anve-hRaktgltplm  964 (2131)
T KOG4369|consen  891 LGISPLMLATMNGHQAATLSLLQPG--SDINAQIETNRNTALTLALF-QGRPEVVFLLLAAQ--ANVE-HRAKTGLTPLM  964 (2131)
T ss_pred             cCcchhhhhhhccccHHHHHHhccc--chhccccccccccceeeccc-cCcchHHHHHHHHh--hhhh-hhcccCCcccc
Confidence            4778899999999999999999988  88887755555 88999999 99999999999887  7787 88889999999


Q ss_pred             HHHhcCCHHHHHHHHHhCCCC----------------------------------CCCCCCCCccHHHHHHhcCChHHHH
Q 036069           87 HAATGGKSKLIEILMRYNPNL----------------------------------PNVRDKSKLLPIHKAAQLGHRDTVR  132 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~~~~----------------------------------~~~~~~~~~tpl~~a~~~~~~~~~~  132 (174)
                      -+|..|-+++-.+|+..|++.                                  +.++|..|.|+|.+|+..|+...+.
T Consensus       965 e~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~ 1044 (2131)
T KOG4369|consen  965 EMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCP 1044 (2131)
T ss_pred             hhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccch
Confidence            999999999999999988775                                  4456667777777777777777777


Q ss_pred             HHHhcCC-CcccCCCCcchHHHHHHcCcccccccccce
Q 036069          133 YLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYYSAEPY  169 (174)
Q Consensus       133 ~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~  169 (174)
                      .|++.++ .+..+....+++..|.+.|+++||..-.++
T Consensus      1045 il~~~~ad~d~qdnr~~S~~maafRKgh~~iVk~mv~~ 1082 (2131)
T KOG4369|consen 1045 ILVSSVADADQQDNRTNSRTMAAFRKGHFAIVKKMVPP 1082 (2131)
T ss_pred             HHhhcccChhhhhcccccccHHHHHhchhheeccccCc
Confidence            7777777 666666667777777777777777554443

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.54  E-value=7.7e-15  Score=80.57  Aligned_cols=51  Identities=27%  Similarity=0.415  Sum_probs=25.5

Q ss_pred             hhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHH
Q 036069           70 QNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKA  122 (174)
Q Consensus        70 ~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a  122 (174)
                      +.+++ .+|..|+||||+|+.+|+.+++++|++.+.+ ++.+|..|+||+++|
T Consensus         6 ~~~~n-~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d-~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    6 PADVN-AQDKYGNTPLHWAARYGHSEVVRLLLQNGAD-PNAKDKDGQTPLHYA   56 (56)
T ss_dssp             T--TT----TTS--HHHHHHHHT-HHHHHHHHHCT---TT---TTS--HHHH-
T ss_pred             cCCCc-CcCCCCCcHHHHHHHcCcHHHHHHHHHCcCC-CCCCcCCCCCHHHhC
Confidence            35555 6777777777777777777777777777777 477777777777765

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.54  E-value=2.8e-14  Score=77.83  Aligned_cols=52  Identities=12%  Similarity=0.178  Sum_probs=27.9

Q ss_pred             cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHH
Q 036069           46 SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILM  101 (174)
Q Consensus        46 t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll  101 (174)
                      |+||+|++ .|+.+++++|++.+  .+++ .+|..|.||||+|+..|+.+++++|+
T Consensus         3 t~lh~A~~-~g~~~~~~~Ll~~~--~din-~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    3 TPLHWAAR-SGNLEIVKLLLEHG--ADIN-AQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             BHHHHHHH-TT-HHHHHHHHHTT--SGTT--B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             hHHHHHHH-hCCHHHHHHHHHCC--CCCC-CCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            56666666 66666666666655  5555 55666666666666666666666553

...

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.53  E-value=7.8e-15  Score=118.32  Aligned_cols=149  Identities=12%  Similarity=0.114  Sum_probs=114.0

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHH
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMV   86 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~   86 (174)
                      .-.++|..||..|+.|.+..|+.+|  +.+..+ +..| +||.+|+. .||..+|+.|+++.  ++++.-.|+.+.|+|-
T Consensus       756 n~~t~LT~acaggh~e~vellv~rg--aniehr-dkkgf~plImaat-agh~tvV~~llk~h--a~veaQsdrtkdt~lS  829 (2131)
T KOG4369|consen  756 NIKTNLTSACAGGHREEVELLVVRG--ANIEHR-DKKGFVPLIMAAT-AGHITVVQDLLKAH--ADVEAQSDRTKDTMLS  829 (2131)
T ss_pred             cccccccccccCccHHHHHHHHHhc--cccccc-ccccchhhhhhcc-cCchHHHHHHHhhh--hhhhhhcccccCceEE
Confidence            3457788888888888888888888  777766 7777 88888888 88888888888877  7666345667888888


Q ss_pred             HHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-Ccc--cCCCCcchHHHHHHcCccccc
Q 036069           87 HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHL--DGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~--~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      +||..|..++++.|+..|++ -..++-..+||+.+|...|..+++..|+..|. ...  -.+.|..||.+|...|+-.-+
T Consensus       830 lacsggr~~vvelLl~~gan-kehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at  908 (2131)
T KOG4369|consen  830 LACSGGRTRVVELLLNAGAN-KEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAAT  908 (2131)
T ss_pred             EecCCCcchHHHHHHHhhcc-ccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHH
Confidence            88888888888888888877 36677778888888888888888888888876 333  455677888888887775544

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.50  E-value=8.1e-14  Score=104.82  Aligned_cols=103  Identities=17%  Similarity=0.210  Sum_probs=90.3

Q ss_pred             HHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCC
Q 036069           48 FDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGH  127 (174)
Q Consensus        48 L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~  127 (174)
                      |--|+. .|-+++|+-.+...  .+.. ..+..|.|+||-|+..||.+||++|++.|++ +|..|.+||||||.|+..++
T Consensus       554 LLDaaL-eGEldlVq~~i~ev--~DpS-qpNdEGITaLHNAiCaghyeIVkFLi~~gan-VNa~DSdGWTPLHCAASCNn  628 (752)
T KOG0515|consen  554 LLDAAL-EGELDLVQRIIYEV--TDPS-QPNDEGITALHNAICAGHYEIVKFLIEFGAN-VNAADSDGWTPLHCAASCNN  628 (752)
T ss_pred             HHhhhh-cchHHHHHHHHHhh--cCCC-CCCccchhHHhhhhhcchhHHHHHHHhcCCc-ccCccCCCCchhhhhhhcCc
Confidence            445777 89999999999887  5555 7888999999999999999999999999999 59999999999999999999


Q ss_pred             hHHHHHHHhcCCCcc--cCCCCcchHHHHH
Q 036069          128 RDTVRYLLSKTTAHL--DGHDWSTLLKDLI  155 (174)
Q Consensus       128 ~~~~~~ll~~~~~~~--~~~~g~t~l~~a~  155 (174)
                      ..+++.|++.|+..+  .-.++.|+...|-
T Consensus       629 v~~ckqLVe~GaavfAsTlSDmeTa~eKCe  658 (752)
T KOG0515|consen  629 VPMCKQLVESGAAVFASTLSDMETAAEKCE  658 (752)
T ss_pred             hHHHHHHHhccceEEeeecccccchhhhcc
Confidence            999999999999544  5567788776554

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.49  E-value=3.2e-13  Score=94.85  Aligned_cols=121  Identities=19%  Similarity=0.140  Sum_probs=108.2

Q ss_pred             cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhc
Q 036069           46 SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQL  125 (174)
Q Consensus        46 t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~  125 (174)
                      ++|.-+.. .++.+....|++..  ..++ ..|..|.++|..|+..|+.++++.|++.|+++-.-++..++||||+|+..
T Consensus        14 ~~Lle~i~-Kndt~~a~~LLs~v--r~vn-~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALS   89 (396)
T KOG1710|consen   14 SPLLEAID-KNDTEAALALLSTV--RQVN-QRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALS   89 (396)
T ss_pred             hHHHHHHc-cCcHHHHHHHHHHh--hhhh-ccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHc
Confidence            68888888 89998888888876  6677 99999999999999999999999999999996335778899999999999


Q ss_pred             CChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccccccccee
Q 036069          126 GHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYYSAEPYI  170 (174)
Q Consensus       126 ~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~  170 (174)
                      |+.++.++|++.|+ .+..|.-|.|+-..|+.-|+.+.|--|.+++
T Consensus        90 Gn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~~  135 (396)
T KOG1710|consen   90 GNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNHI  135 (396)
T ss_pred             CCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhccc
Confidence            99999999999999 7889999999999999999998886666553

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.47  E-value=8.6e-14  Score=76.38  Aligned_cols=54  Identities=31%  Similarity=0.410  Sum_probs=32.1

Q ss_pred             HHHhC-CCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHH
Q 036069          100 LMRYN-PNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDL  154 (174)
Q Consensus       100 Ll~~~-~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a  154 (174)
                      |++.+ .+ ++.+|..|.||||+|+.+|+.+++++|+..++ ...++..|.|||++|
T Consensus         1 LL~~~~~~-~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPAD-VNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T---TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCC-CcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            56666 44 68999999999999999999999999998888 777999999999986

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=99.37  E-value=8.4e-12  Score=95.05  Aligned_cols=121  Identities=18%  Similarity=0.268  Sum_probs=107.6

Q ss_pred             HHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhc
Q 036069           13 VTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATG   91 (174)
Q Consensus        13 L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~   91 (174)
                      +..|+..+++-.++.....|  .++..+ +... +.||+|+. .|+-++|+++++++.+..++ +.|..|.|+||.|+..
T Consensus       870 il~av~~~D~~klqE~h~~g--g~ll~~-~~~~~sllh~a~~-tg~~eivkyildh~p~elld-~~de~get~lhkaa~~  944 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNG--GSLLIQ-GPDHCSLLHYAAK-TGNGEIVKYILDHGPSELLD-MADETGETALHKAACQ  944 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcC--CceEee-CcchhhHHHHHHh-cCChHHHHHHHhcCCHHHHH-HHhhhhhHHHHHHHHh
Confidence            56778888888778887777  677766 6777 99999999 99999999999999666677 8899999999999999


Q ss_pred             CCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           92 GKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        92 ~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      ++..++.+|++.|+.+ .-.|..|.||-..|-+.|..+...||-++..
T Consensus       945 ~~r~vc~~lvdagasl-~ktd~kg~tp~eraqqa~d~dlaayle~rq~  991 (1004)
T KOG0782|consen  945 RNRAVCQLLVDAGASL-RKTDSKGKTPQERAQQAGDPDLAAYLESRQN  991 (1004)
T ss_pred             cchHHHHHHHhcchhh-eecccCCCChHHHHHhcCCchHHHHHhhhhc
Confidence            9999999999999995 7789999999999999999999999987755

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=99.07  E-value=2e-10  Score=90.98  Aligned_cols=82  Identities=21%  Similarity=0.259  Sum_probs=72.6

Q ss_pred             hhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCC-CCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcch
Q 036069           73 LQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDK-SKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTL  150 (174)
Q Consensus        73 ~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~  150 (174)
                      .+ .+|..|+++||+|+..+..++++||+++|.++ ..+|. .|+||||-|..+|++||+..|+.+|+ ..++|++|..|
T Consensus        45 an-ikD~~GR~alH~~~S~~k~~~l~wLlqhGidv-~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsp  122 (1267)
T KOG0783|consen   45 AN-IKDRYGRTALHIAVSENKNSFLRWLLQHGIDV-FVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSP  122 (1267)
T ss_pred             hh-HHHhhccceeeeeeccchhHHHHHHHhcCcee-eeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCH
Confidence            45 88999999999999999999999999999984 76665 68999999999999999999999998 77799999999


Q ss_pred             HHHHHH
Q 036069          151 LKDLIN  156 (174)
Q Consensus       151 l~~a~~  156 (174)
                      |..-++
T Consensus       123 lq~~~r  128 (1267)
T KOG0783|consen  123 LQFLSR  128 (1267)
T ss_pred             HHHHhh
Confidence            987765

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=99.01  E-value=4.5e-10  Score=83.96  Aligned_cols=90  Identities=14%  Similarity=0.175  Sum_probs=82.0

Q ss_pred             cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhc
Q 036069           46 SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQL  125 (174)
Q Consensus        46 t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~  125 (174)
                      ..+++|++ .|+...++-+.-.+  .+++ .+|.+.+|+||+||..|+++++++|++.+...++.+|+.|+|||--|...
T Consensus       508 i~~~~aa~-~GD~~alrRf~l~g--~D~~-~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F  583 (622)
T KOG0506|consen  508 INVMYAAK-NGDLSALRRFALQG--MDLE-TKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF  583 (622)
T ss_pred             hhhhhhhh-cCCHHHHHHHHHhc--cccc-ccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence            57899999 99999999988888  8888 99999999999999999999999999987766789999999999999999


Q ss_pred             CChHHHHHHHhcCC
Q 036069          126 GHRDTVRYLLSKTT  139 (174)
Q Consensus       126 ~~~~~~~~ll~~~~  139 (174)
                      +|.+++++|-+.-.
T Consensus       584 ~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  584 KHKEVVKLLEEAQY  597 (622)
T ss_pred             CcHHHHHHHHHHhc
Confidence            99999999976543

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.98  E-value=3.3e-09  Score=79.84  Aligned_cols=86  Identities=10%  Similarity=-0.022  Sum_probs=73.3

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHH
Q 036069           11 MQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAA   89 (174)
Q Consensus        11 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~   89 (174)
                      ..||..++.|+.+....||..|  +++|..-...| ||||.|++ .|+..-+++|+-.|  ++++ ..|.+|.||+.+|-
T Consensus       135 rQLhasvRt~nlet~LRll~lG--A~~N~~hpekg~TpLHvAAk-~Gq~~Q~ElL~vYG--AD~~-a~d~~GmtP~~~AR  208 (669)
T KOG0818|consen  135 KQLHSSVRTGNLETCLRLLSLG--AQANFFHPEKGNTPLHVAAK-AGQILQAELLAVYG--ADPG-AQDSSGMTPVDYAR  208 (669)
T ss_pred             HHHHHHhhcccHHHHHHHHHcc--cccCCCCcccCCchhHHHHh-ccchhhhhHHhhcc--CCCC-CCCCCCCcHHHHHH
Confidence            4589999999999888889998  88887745567 99999999 99998899998888  8888 89999999999999


Q ss_pred             hcCCHHHHHHHHH
Q 036069           90 TGGKSKLIEILMR  102 (174)
Q Consensus        90 ~~~~~~~~~~Ll~  102 (174)
                      ..||-++.+-|++
T Consensus       209 ~~gH~~laeRl~e  221 (669)
T KOG0818|consen  209 QGGHHELAERLVE  221 (669)
T ss_pred             hcCchHHHHHHHH
Confidence            9998777766664

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.98  E-value=3e-09  Score=80.06  Aligned_cols=85  Identities=25%  Similarity=0.291  Sum_probs=75.4

Q ss_pred             HHHHHHhhCCCHHHHHHHHhccchhhhhhhcccC-CchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhc
Q 036069           47 IFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNE-GNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQL  125 (174)
Q Consensus        47 ~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~-g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~  125 (174)
                      -||-.++ .|+.+..=-|+..|  ++.+ ..+.+ |.||||.|+..|+..-+++|+-+|++ ++..|..|.||+.+|-..
T Consensus       136 QLhasvR-t~nlet~LRll~lG--A~~N-~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD-~~a~d~~GmtP~~~AR~~  210 (669)
T KOG0818|consen  136 QLHSSVR-TGNLETCLRLLSLG--AQAN-FFHPEKGNTPLHVAAKAGQILQAELLAVYGAD-PGAQDSSGMTPVDYARQG  210 (669)
T ss_pred             HHHHHhh-cccHHHHHHHHHcc--cccC-CCCcccCCchhHHHHhccchhhhhHHhhccCC-CCCCCCCCCcHHHHHHhc
Confidence            4888999 99999888888998  8777 77766 99999999999999999999999999 599999999999999999


Q ss_pred             CChHHHHHHHh
Q 036069          126 GHRDTVRYLLS  136 (174)
Q Consensus       126 ~~~~~~~~ll~  136 (174)
                      ||-++.+-|++
T Consensus       211 gH~~laeRl~e  221 (669)
T KOG0818|consen  211 GHHELAERLVE  221 (669)
T ss_pred             CchHHHHHHHH
Confidence            99887765543

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.94  E-value=3.7e-09  Score=80.86  Aligned_cols=92  Identities=18%  Similarity=0.174  Sum_probs=77.9

Q ss_pred             HHHHHHhhCCCHHHHHHHHhccchhhhhh-hcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhc
Q 036069           47 IFDLIVNSDAPPMFLDKLVSKVHQNFLQE-WVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQL  125 (174)
Q Consensus        47 ~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~-~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~  125 (174)
                      -|-.|+. ..+...+-+|+.++...++++ ..+.+|+|+||+||+.|++.+.++|+.+|.+ +..+|..|+|+|.||-+.
T Consensus       627 qLl~A~~-~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d-v~~rda~g~t~l~yar~a  704 (749)
T KOG0705|consen  627 QLLRAVA-AEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD-VMARDAHGRTALFYARQA  704 (749)
T ss_pred             HHHHHHH-HHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc-ceecccCCchhhhhHhhc
Confidence            3556777 788888889999883333331 3456789999999999999999999999999 589999999999999999


Q ss_pred             CChHHHHHHHhcCCC
Q 036069          126 GHRDTVRYLLSKTTA  140 (174)
Q Consensus       126 ~~~~~~~~ll~~~~~  140 (174)
                      |..+|+..|+.+|.+
T Consensus       705 ~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  705 GSQECIDVLLQYGCP  719 (749)
T ss_pred             ccHHHHHHHHHcCCC
Confidence            999999999999983

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.93  E-value=1.6e-09  Score=81.13  Aligned_cols=96  Identities=11%  Similarity=0.066  Sum_probs=83.7

Q ss_pred             cccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCc
Q 036069            4 ITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGN   82 (174)
Q Consensus         4 ~~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~   82 (174)
                      .++.++..++..|+..|++..++.+.-.+  .+++.. |.+. |+||.|+. .|+.+++++|++.. ..+.. .+|..|+
T Consensus       501 ~~~~~~~i~~~~aa~~GD~~alrRf~l~g--~D~~~~-DyD~RTaLHvAAa-EG~v~v~kfl~~~~-kv~~~-~kDRw~r  574 (622)
T KOG0506|consen  501 PRENDTVINVMYAAKNGDLSALRRFALQG--MDLETK-DYDDRTALHVAAA-EGHVEVVKFLLNAC-KVDPD-PKDRWGR  574 (622)
T ss_pred             cccccchhhhhhhhhcCCHHHHHHHHHhc--cccccc-ccccchhheeecc-cCceeHHHHHHHHH-cCCCC-hhhccCC
Confidence            34566788999999999999999999999  899866 7777 99999999 99999999999975 13344 7899999


Q ss_pred             hHHHHHHhcCCHHHHHHHHHhCC
Q 036069           83 ACMVHAATGGKSKLIEILMRYNP  105 (174)
Q Consensus        83 ~~l~~A~~~~~~~~~~~Ll~~~~  105 (174)
                      |||.-|...+|.+++++|-+...
T Consensus       575 tPlDdA~~F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  575 TPLDDAKHFKHKEVVKLLEEAQY  597 (622)
T ss_pred             CcchHhHhcCcHHHHHHHHHHhc
Confidence            99999999999999999998644

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.88  E-value=1.8e-09  Score=85.74  Aligned_cols=100  Identities=17%  Similarity=0.187  Sum_probs=80.4

Q ss_pred             CCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccC-CchHHHHHHhcCCHHHH
Q 036069           20 NDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNE-GNACMVHAATGGKSKLI   97 (174)
Q Consensus        20 g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~-g~~~l~~A~~~~~~~~~   97 (174)
                      +...-++-++++.-....+.. |..| ++||+++. .+..+++++|+.+|  .++. .+|.. |+||||-|..+|+.+|+
T Consensus        28 s~~Nqlk~F~~k~c~n~anik-D~~GR~alH~~~S-~~k~~~l~wLlqhG--idv~-vqD~ESG~taLHRaiyyG~idca  102 (1267)
T KOG0783|consen   28 SEPNQLKGFSEKSCQNLANIK-DRYGRTALHIAVS-ENKNSFLRWLLQHG--IDVF-VQDEESGYTALHRAIYYGNIDCA  102 (1267)
T ss_pred             CChhHHHHHHHHhhhhhhhHH-Hhhccceeeeeec-cchhHHHHHHHhcC--ceee-eccccccchHhhHhhhhchHHHH
Confidence            333344555443212234434 7788 99999999 99999999999999  8888 88876 99999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCccHHHHHHhc
Q 036069           98 EILMRYNPNLPNVRDKSKLLPIHKAAQL  125 (174)
Q Consensus        98 ~~Ll~~~~~~~~~~~~~~~tpl~~a~~~  125 (174)
                      -.|+.+|..+ .++|..|.+||...++.
T Consensus       103 ~lLL~~g~SL-~i~Dkeglsplq~~~r~  129 (1267)
T KOG0783|consen  103 SLLLSKGRSL-RIKDKEGLSPLQFLSRV  129 (1267)
T ss_pred             HHHHhcCCce-EEecccCCCHHHHHhhc
Confidence            9999999985 89999999999888774

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.87  E-value=1.1e-08  Score=78.31  Aligned_cols=92  Identities=12%  Similarity=0.148  Sum_probs=80.1

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCccccccccC-Cc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHH
Q 036069           11 MQVTRYILKNDWKDLEEYIMSKTSNTLTDKITG-GL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHA   88 (174)
Q Consensus        11 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~-~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A   88 (174)
                      ..|..|+...++..+-.||.+|+...++..+.. +| |+||+||+ .|+..+.++|+=++  .++. .+|..|+|+|.||
T Consensus       626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~-~gnVvl~QLLiWyg--~dv~-~rda~g~t~l~ya  701 (749)
T KOG0705|consen  626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAAR-KGNVVLAQLLIWYG--VDVM-ARDAHGRTALFYA  701 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhh-hcchhHHHHHHHhC--ccce-ecccCCchhhhhH
Confidence            347788888899999999999865666655444 45 99999999 99999999999988  8888 9999999999999


Q ss_pred             HhcCCHHHHHHHHHhCCC
Q 036069           89 ATGGKSKLIEILMRYNPN  106 (174)
Q Consensus        89 ~~~~~~~~~~~Ll~~~~~  106 (174)
                      -+.|..+|+..|+++|..
T Consensus       702 r~a~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  702 RQAGSQECIDVLLQYGCP  719 (749)
T ss_pred             hhcccHHHHHHHHHcCCC
Confidence            999999999999999865

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.84  E-value=8.4e-09  Score=50.02  Aligned_cols=32  Identities=28%  Similarity=0.541  Sum_probs=21.7

Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCC
Q 036069           80 EGNACMVHAATGGKSKLIEILMRYNPNLPNVRD  112 (174)
Q Consensus        80 ~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~  112 (174)
                      +|.||||+|+..|+.+++++|++.|++ ++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGAD-INARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSC-TTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCC-CCCCC
Confidence            366777777777777777777777766 35544

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>PF13606 Ank_3: Ankyrin repeat

Probab=98.81  E-value=8.4e-09  Score=48.75  Aligned_cols=26  Identities=23%  Similarity=0.445  Sum_probs=16.9

Q ss_pred             CchHHHHHHhcCCHHHHHHHHHhCCC
Q 036069           81 GNACMVHAATGGKSKLIEILMRYNPN  106 (174)
Q Consensus        81 g~~~l~~A~~~~~~~~~~~Ll~~~~~  106 (174)
                      |+||||+||+.|+.+++++|+++|++
T Consensus         2 G~T~Lh~A~~~g~~e~v~~Ll~~gad   27 (30)
T PF13606_consen    2 GNTPLHLAASNGNIEIVKYLLEHGAD   27 (30)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence            56666666666666666666666655

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.80  E-value=1.4e-08  Score=77.91  Aligned_cols=111  Identities=15%  Similarity=0.091  Sum_probs=90.2

Q ss_pred             HHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCC-CCCCCCCCCccHHHHHHhcCCh
Q 036069           50 LIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPN-LPNVRDKSKLLPIHKAAQLGHR  128 (174)
Q Consensus        50 ~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~~~~tpl~~a~~~~~~  128 (174)
                      .|+. .+++..++.....+  ..+- .++.+..+.||+|+..|+-++++|++++++. +.++.+..|+|+||.|+..++.
T Consensus       872 ~av~-~~D~~klqE~h~~g--g~ll-~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r  947 (1004)
T KOG0782|consen  872 RAVL-SSDLMKLQETHLNG--GSLL-IQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNR  947 (1004)
T ss_pred             HHHH-hccHHHHHHHHhcC--CceE-eeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcch
Confidence            3444 45544444444444  5566 7888889999999999999999999999865 3567888999999999999999


Q ss_pred             HHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          129 DTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       129 ~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      .+.++|++.|+ ..-.+..|.||-..|-+.|.-|++.
T Consensus       948 ~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaa  984 (1004)
T KOG0782|consen  948 AVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAA  984 (1004)
T ss_pred             HHHHHHHhcchhheecccCCCChHHHHHhcCCchHHH
Confidence            99999999999 5568899999999999988877763

>PF13606 Ank_3: Ankyrin repeat

Probab=98.74  E-value=1.2e-08  Score=48.21  Aligned_cols=29  Identities=0%  Similarity=-0.059  Sum_probs=21.5

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCcccc
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLT   38 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~   38 (174)
                      +|+||||.|++.|+.+++++|++.|  ++++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~g--advn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHG--ADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcC--CCCC
Confidence            3677777777777777777777777  6654

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.71  E-value=5.3e-08  Score=74.00  Aligned_cols=59  Identities=17%  Similarity=0.293  Sum_probs=34.6

Q ss_pred             hcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHH
Q 036069           76 WVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLL  135 (174)
Q Consensus        76 ~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll  135 (174)
                      .+|..|.||||+|+.-|+.+.++.|+..+++ +..+|..|++|||-|+..|+.+++.-++
T Consensus        50 ~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad-v~~kN~~gWs~L~EAv~~g~~q~i~~vl  108 (560)
T KOG0522|consen   50 RRDPPGRTPLHLAVRLGHVEAARILLSAGAD-VSIKNNEGWSPLHEAVSTGNEQIITEVL  108 (560)
T ss_pred             cccCCCCccHHHHHHhcCHHHHHHHHhcCCC-ccccccccccHHHHHHHcCCHHHHHHHH
Confidence            5555566666666666666666666666655 3555666666666666666555544443

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.67  E-value=2e-07  Score=74.53  Aligned_cols=120  Identities=13%  Similarity=0.112  Sum_probs=94.6

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCC--ccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTS--NTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~--~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      .+..-...|+++|+...|+..++....  ..+|.. |.-| ++|+.|.. ..+.++.++|+++.  ...        ..+
T Consensus        24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~-d~lGr~al~iai~-nenle~~eLLl~~~--~~~--------gdA   91 (822)
T KOG3609|consen   24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCR-DPLGRLALHIAID-NENLELQELLLDTS--SEE--------GDA   91 (822)
T ss_pred             hhhHHHHHHHHcCChHHHHHHHHhccccccchhcc-ChHhhhceecccc-cccHHHHHHHhcCc--ccc--------chH
Confidence            356668899999999999999886511  233422 5668 99999999 99999999999986  322        358


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCC---------CCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLP---------NVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~---------~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      |-+|+..|.+++++.++.+.....         ...-..+.||+.+||..++.|+++.|+.+|+
T Consensus        92 LL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~  155 (822)
T KOG3609|consen   92 LLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH  155 (822)
T ss_pred             HHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence            899999999999999998643210         1223357899999999999999999999998

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.65  E-value=9.4e-08  Score=72.67  Aligned_cols=89  Identities=18%  Similarity=0.143  Sum_probs=71.9

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHH
Q 036069           11 MQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAA   89 (174)
Q Consensus        11 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~   89 (174)
                      .|+|.++...+.+.....+.......++ ..+..| ||||.|++ .|+.+.++.|+..+  +++. .+|..|++|||-|+
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id-~~D~~g~TpLhlAV~-Lg~~~~a~~Ll~a~--Adv~-~kN~~gWs~L~EAv   96 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVID-RRDPPGRTPLHLAVR-LGHVEAARILLSAG--ADVS-IKNNEGWSPLHEAV   96 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceec-cccCCCCccHHHHHH-hcCHHHHHHHHhcC--CCcc-ccccccccHHHHHH
Confidence            4589999888877655544332123444 337778 99999999 99999999999999  8888 99999999999999


Q ss_pred             hcCCHHHHHHHHHhC
Q 036069           90 TGGKSKLIEILMRYN  104 (174)
Q Consensus        90 ~~~~~~~~~~Ll~~~  104 (174)
                      ..|+..++..++++.
T Consensus        97 ~~g~~q~i~~vlr~~  111 (560)
T KOG0522|consen   97 STGNEQIITEVLRHL  111 (560)
T ss_pred             HcCCHHHHHHHHHHh
Confidence            999999888877654

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.65  E-value=7.2e-08  Score=46.66  Aligned_cols=30  Identities=37%  Similarity=0.486  Sum_probs=26.7

Q ss_pred             CCccHHHHHHhcCChHHHHHHHhcCC-Cccc
Q 036069          114 SKLLPIHKAAQLGHRDTVRYLLSKTT-AHLD  143 (174)
Q Consensus       114 ~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~  143 (174)
                      +|+||||+|+..|+.+++++|+++|+ .+.+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~   31 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINAR   31 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCB
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCC
Confidence            48999999999999999999999988 5543

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.50  E-value=5.2e-07  Score=66.30  Aligned_cols=55  Identities=11%  Similarity=0.028  Sum_probs=42.4

Q ss_pred             HHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCC
Q 036069           48 FDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPN  106 (174)
Q Consensus        48 L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~  106 (174)
                      |..||+ .|+.+.|+.|++.+  .+++ ..|....+||.+|+-.||.+++++|++.|+.
T Consensus        40 lceacR-~GD~d~v~~LVetg--vnVN-~vD~fD~spL~lAsLcGHe~vvklLLenGAi   94 (516)
T KOG0511|consen   40 LCEACR-AGDVDRVRYLVETG--VNVN-AVDRFDSSPLYLASLCGHEDVVKLLLENGAI   94 (516)
T ss_pred             HHHHhh-cccHHHHHHHHHhC--CCcc-hhhcccccHHHHHHHcCcHHHHHHHHHcCCc
Confidence            557777 78888888888777  6677 7777777788888877888888888877775

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=98.33  E-value=2.2e-06  Score=57.38  Aligned_cols=67  Identities=19%  Similarity=0.191  Sum_probs=50.6

Q ss_pred             hhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           72 FLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        72 ~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      +++ .+|..|+|+++.|+..|+.+.+.||+..|...+...|..+.+++.+|-+.|..+++..|.+...
T Consensus         4 ~in-~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~   70 (223)
T KOG2384|consen    4 NIN-ARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDR   70 (223)
T ss_pred             Ccc-chhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhc
Confidence            455 6777788888888888888888888888755567778888888888888888888777766544

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=98.31  E-value=6e-07  Score=73.06  Aligned_cols=83  Identities=20%  Similarity=0.211  Sum_probs=71.2

Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcC
Q 036069           80 EGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCN  158 (174)
Q Consensus        80 ~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~  158 (174)
                      .|.+++|.|+..+...++++|++.+++ ++..|..|.||+|.+...|+...+..++++++ ....+.+|.+++.+|....
T Consensus       655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~  733 (785)
T KOG0521|consen  655 IGCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAA  733 (785)
T ss_pred             cccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhc
Confidence            468899999999999999999999998 59999999999999999999999999999888 6778888999999887765


Q ss_pred             ccccc
Q 036069          159 LFGKY  163 (174)
Q Consensus       159 ~~~~~  163 (174)
                      +-+++
T Consensus       734 ~~d~~  738 (785)
T KOG0521|consen  734 NADIV  738 (785)
T ss_pred             cccHH
Confidence            55544

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=98.28  E-value=1.1e-06  Score=71.79  Aligned_cols=125  Identities=14%  Similarity=0.062  Sum_probs=81.0

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHc-CCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMS-KTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~-~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      ...|.+-+|+++..+....++.+++- +   ..+...+..+ -.+|. |. .++.+..-+++... ...++ .+|..|+|
T Consensus       571 ~~r~~lllhL~a~~lyawLie~~~e~~~---~~~~eld~d~qgV~hf-ca-~lg~ewA~ll~~~~-~~ai~-i~D~~G~t  643 (975)
T KOG0520|consen  571 NFRDMLLLHLLAELLYAWLIEKVIEWAG---SGDLELDRDGQGVIHF-CA-ALGYEWAFLPISAD-GVAID-IRDRNGWT  643 (975)
T ss_pred             CCcchHHHHHHHHHhHHHHHHHHhcccc---cCchhhcccCCChhhH-hh-hcCCceeEEEEeec-ccccc-cccCCCCc
Confidence            34577788888888888888887775 3   1222335555 66666 44 46666554444321 25566 77888888


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCC-----CCCCCCCCccHHHHHHhcCChHHHHHHHhc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNL-----PNVRDKSKLLPIHKAAQLGHRDTVRYLLSK  137 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~-----~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~  137 (174)
                      |||+|+..|+..++..|.+.++..     +...+..|.|+...|...|+..+..+|-+.
T Consensus       644 pL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  644 PLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             ccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            888888888888888888766552     112233467777777777777777776543

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.21  E-value=9.6e-06  Score=59.86  Aligned_cols=55  Identities=7%  Similarity=-0.114  Sum_probs=45.0

Q ss_pred             hHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhcc
Q 036069           10 VMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKV   68 (174)
Q Consensus        10 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~   68 (174)
                      .--|..||+.|+.+.+++|++.|  ..+|.. +... +||.+|+. .||..++++|+++|
T Consensus        37 f~elceacR~GD~d~v~~LVetg--vnVN~v-D~fD~spL~lAsL-cGHe~vvklLLenG   92 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETG--VNVNAV-DRFDSSPLYLASL-CGHEDVVKLLLENG   92 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhC--CCcchh-hcccccHHHHHHH-cCcHHHHHHHHHcC
Confidence            44577888888888888888887  778755 6666 88888888 88888888888887

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=98.16  E-value=2.5e-06  Score=69.78  Aligned_cols=116  Identities=13%  Similarity=0.033  Sum_probs=86.4

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhc-cchhhhhhhcccCCchHHHHHHhcCCHHHHHHHH-HhCCCCCCCCCCCCccH
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSK-VHQNFLQEWVSNEGNACMVHAATGGKSKLIEILM-RYNPNLPNVRDKSKLLP  118 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~-~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll-~~~~~~~~~~~~~~~tp  118 (174)
                      ...+ +.+|.++. .+..-+++.+++. +  .... ..|.+|...+|.++.. +.++.-+|. ..+.. ++++|..|+||
T Consensus       571 ~~r~~lllhL~a~-~lyawLie~~~e~~~--~~~~-eld~d~qgV~hfca~l-g~ewA~ll~~~~~~a-i~i~D~~G~tp  644 (975)
T KOG0520|consen  571 NFRDMLLLHLLAE-LLYAWLIEKVIEWAG--SGDL-ELDRDGQGVIHFCAAL-GYEWAFLPISADGVA-IDIRDRNGWTP  644 (975)
T ss_pred             CCcchHHHHHHHH-HhHHHHHHHHhcccc--cCch-hhcccCCChhhHhhhc-CCceeEEEEeecccc-cccccCCCCcc
Confidence            4456 89999999 9998889998885 4  2222 4566777778885544 444444333 35566 59999999999


Q ss_pred             HHHHHhcCChHHHHHHHhcCC-Ccc------cCCCCcchHHHHHHcCccccc
Q 036069          119 IHKAAQLGHRDTVRYLLSKTT-AHL------DGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       119 l~~a~~~~~~~~~~~ll~~~~-~~~------~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ||+|+..|+..++..|+..|+ ...      ....|.|+-..|-..|+.++.
T Consensus       645 L~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia  696 (975)
T KOG0520|consen  645 LHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIA  696 (975)
T ss_pred             cchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchH
Confidence            999999999999999998777 322      455688888888888886655

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=98.11  E-value=3.7e-06  Score=68.60  Aligned_cols=86  Identities=20%  Similarity=0.304  Sum_probs=78.2

Q ss_pred             cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhc
Q 036069           46 SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQL  125 (174)
Q Consensus        46 t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~  125 (174)
                      ++||.|+. .|..-++++|+..+  ++++ ..|..|++|+|.+...|+......|++.+++ .+..+..|.+|+.+|...
T Consensus       658 s~lh~a~~-~~~~~~~e~ll~~g--a~vn-~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~-~~a~~~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  658 SLLHVAVG-TGDSGAVELLLQNG--ADVN-ALDSKGRTPLHHATASGHTSIACLLLKRGAD-PNAFDPDGKLPLDIAMEA  732 (785)
T ss_pred             chhhhhhc-cchHHHHHHHHhcC--Ccch-hhhccCCCcchhhhhhcccchhhhhcccccc-ccccCccCcchhhHHhhh
Confidence            99999999 99999999999999  8899 9999999999999999999999999999998 599999999999999877


Q ss_pred             CChHHHHHHHh
Q 036069          126 GHRDTVRYLLS  136 (174)
Q Consensus       126 ~~~~~~~~ll~  136 (174)
                      .+.+.+-++..
T Consensus       733 ~~~d~~~l~~l  743 (785)
T KOG0521|consen  733 ANADIVLLLRL  743 (785)
T ss_pred             ccccHHHHHhh
Confidence            77777655543

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=97.96  E-value=2.5e-05  Score=62.99  Aligned_cols=109  Identities=16%  Similarity=-0.002  Sum_probs=89.1

Q ss_pred             cHHHHHHhhCCCHHHHHHHHhccch--hhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHH
Q 036069           46 SIFDLIVNSDAPPMFLDKLVSKVHQ--NFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAA  123 (174)
Q Consensus        46 t~L~~A~~~~g~~~~v~~Ll~~~~~--~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~  123 (174)
                      --+-.|+. .|+...|+..++....  -+++ ..|.-|.++++.|..+.+.++.++|+++....        ..+|.+|.
T Consensus        27 ~~fL~a~E-~gd~~~V~k~l~~~~~~~lnin-c~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~aI   96 (822)
T KOG3609|consen   27 KGFLLAHE-NGDVPLVAKALEYKAVSKLNIN-CRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLAI   96 (822)
T ss_pred             HHHHHHHH-cCChHHHHHHHHhccccccchh-ccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHHH
Confidence            45668999 9999999999887622  3355 78999999999999999999999999886542        34899999


Q ss_pred             hcCChHHHHHHHhcCCCc-----------ccCCCCcchHHHHHHcCcccccc
Q 036069          124 QLGHRDTVRYLLSKTTAH-----------LDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       124 ~~~~~~~~~~ll~~~~~~-----------~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      ..|..++|+.++.+....           ..-..+.||+.+|+..+++|++.
T Consensus        97 ~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~  148 (822)
T KOG3609|consen   97 AVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQ  148 (822)
T ss_pred             HHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHH
Confidence            999999999999875521           13346789999999999999873

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.77  E-value=0.00013  Score=49.06  Aligned_cols=64  Identities=9%  Similarity=0.099  Sum_probs=37.9

Q ss_pred             cccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHh
Q 036069           36 TLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRY  103 (174)
Q Consensus        36 ~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~  103 (174)
                      ++|.+ |..| |+++.|++ .|+.+.+.+|+..+ .+.+. ..|..|.+++.+|-..|..+.+..|.+.
T Consensus         4 ~in~r-D~fgWTalmcaa~-eg~~eavsyllgrg-~a~vg-v~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    4 NINAR-DAFGWTALMCAAM-EGSNEAVSYLLGRG-VAFVG-VTDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             Cccch-hhhcchHHHHHhh-hcchhHHHHHhccC-ccccc-ccccccchHHHHHHhcChHHHHHHHHHH
Confidence            44544 5555 66666666 66666666666655 23344 5556666666666666666666666554

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.25  E-value=0.00073  Score=51.86  Aligned_cols=64  Identities=17%  Similarity=0.172  Sum_probs=50.1

Q ss_pred             HHHHHHHHhccchhhhh-----hhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHh
Q 036069           58 PMFLDKLVSKVHQNFLQ-----EWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQ  124 (174)
Q Consensus        58 ~~~v~~Ll~~~~~~~~~-----~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~  124 (174)
                      ...+++|.++.  ...+     +..+....|+||+|+.+|...++.+|++.+.+ +.+.|..|.||..++..
T Consensus       404 p~~ie~lken~--lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~D-p~~kd~~Grtpy~ls~n  472 (591)
T KOG2505|consen  404 PDSIEALKENL--LSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCD-PSTKDGAGRTPYSLSAN  472 (591)
T ss_pred             hhHHHHHHhcC--CcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCC-chhcccCCCCccccccc
Confidence            56677777766  2221     03344567999999999999999999999988 69999999999998873

>smart00248 ANK ankyrin repeats

Probab=97.16  E-value=0.00097  Score=29.81  Aligned_cols=26  Identities=19%  Similarity=0.400  Sum_probs=15.5

Q ss_pred             CchHHHHHHhcCCHHHHHHHHHhCCC
Q 036069           81 GNACMVHAATGGKSKLIEILMRYNPN  106 (174)
Q Consensus        81 g~~~l~~A~~~~~~~~~~~Ll~~~~~  106 (174)
                      |.+|+|+|+..++.++++.|++.+.+
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            45566666666666666666655543

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>smart00248 ANK ankyrin repeats

Probab=96.90  E-value=0.0016  Score=29.05  Aligned_cols=24  Identities=0%  Similarity=-0.121  Sum_probs=15.7

Q ss_pred             hhHHHHHHHHhCCHHHHHHHHHcC
Q 036069            9 SVMQVTRYILKNDWKDLEEYIMSK   32 (174)
Q Consensus         9 ~~~~L~~A~~~g~~~~~~~ll~~~   32 (174)
                      |.+|+|.|+..++.++++.+++.+
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~   25 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKG   25 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcC
Confidence            456666666666666666666665

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=96.70  E-value=0.003  Score=48.62  Aligned_cols=64  Identities=6%  Similarity=-0.090  Sum_probs=49.7

Q ss_pred             HHHHHHHHHcCCCccccccccC-----Cc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhc
Q 036069           22 WKDLEEYIMSKTSNTLTDKITG-----GL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATG   91 (174)
Q Consensus        22 ~~~~~~ll~~~~~~~~~~~~~~-----~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~   91 (174)
                      ...+.+|.+++  ...|....+     -. |+||+|+. .|.-++|.+||+.+  .+.. ++|..|.||..+++..
T Consensus       404 p~~ie~lken~--lsgnf~~~pe~~~~ltsT~LH~aa~-qg~~k~v~~~Leeg--~Dp~-~kd~~Grtpy~ls~nk  473 (591)
T KOG2505|consen  404 PDSIEALKENL--LSGNFDVTPEANDYLTSTFLHYAAA-QGARKCVKYFLEEG--CDPS-TKDGAGRTPYSLSANK  473 (591)
T ss_pred             hhHHHHHHhcC--CcccccccccccccccchHHHHHHh-cchHHHHHHHHHhc--CCch-hcccCCCCcccccccH
Confidence            45677777766  555433222     24 89999999 99999999999999  6666 9999999999998833

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=95.93  E-value=0.12  Score=35.03  Aligned_cols=130  Identities=13%  Similarity=0.003  Sum_probs=60.0

Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHh
Q 036069           12 QVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAAT   90 (174)
Q Consensus        12 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~   90 (174)
                      -+..|++.+-+++++..-+..  ..   . -... +.+-.||+ ..+.++|+|+-..-        .-.+-.+-+.+|..
T Consensus        49 Ll~HAVk~nmL~ILqkyke~L--~~---~-~~~~q~LFElAC~-~qkydiV~WI~qnL--------~i~~~~~iFdIA~~  113 (192)
T PF03158_consen   49 LLYHAVKYNMLSILQKYKEDL--EN---E-RYLNQELFELACE-EQKYDIVKWIGQNL--------HIYNPEDIFDIAFA  113 (192)
T ss_pred             HHHHHHHcCcHHHHHHHHHHh--hc---c-hhHHHHHHHHHHH-HccccHHHHHhhcc--------CCCCchhhhhhhhh
Confidence            355666666666666655544  10   0 0112 55667777 77777777773322        11111233445555


Q ss_pred             cCCHHHHH----HHHHhCCCCCCCCCCC--CccHHHHHHhcCChHHHHHHHhcCCCcccCCCCcchHHHHHHcCcccc
Q 036069           91 GGKSKLIE----ILMRYNPNLPNVRDKS--KLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGK  162 (174)
Q Consensus        91 ~~~~~~~~----~Ll~~~~~~~~~~~~~--~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~g~t~l~~a~~~~~~~~  162 (174)
                      ..+.+...    .+.+.... ..-.|..  -..-+..|+..|..+.+.-.+++|+..-     .++|..|+..++..+
T Consensus       114 ~kDlsLyslGY~l~~~~~~~-~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~-----~~vls~Av~ynhRkI  185 (192)
T PF03158_consen  114 KKDLSLYSLGYKLLFNRMMS-EHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVD-----IIVLSQAVKYNHRKI  185 (192)
T ss_pred             ccchhHHHHHHHHHHhhccc-ccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCccc-----HHHHHHHHHhhHHHH
Confidence            55544421    12221111 0000000  0012455666666666665566655111     256666666665443

These proteins may be involved in promoting survival of infected macrophages [].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=95.09  E-value=0.34  Score=34.09  Aligned_cols=116  Identities=11%  Similarity=0.102  Sum_probs=78.1

Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCccccccccCCccHHHHHHhhCCCHHHHHHHHhcc--chhhhhhhcccCCchHHHHHH
Q 036069           12 QVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKV--HQNFLQEWVSNEGNACMVHAA   89 (174)
Q Consensus        12 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~t~L~~A~~~~g~~~~v~~Ll~~~--~~~~~~~~~d~~g~~~l~~A~   89 (174)
                      .|--|+..-+.+.+..++...  .+.-       .++-++.. .+..+++-+|+..-  .-.++.  .-..+..-+.++.
T Consensus       156 sledAV~AsN~~~i~~~VtdK--kdA~-------~Am~~si~-~~K~dva~~lls~f~ft~~dv~--~~~~~~ydieY~L  223 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVTDK--KDAH-------QAMWLSIG-NAKEDVALYLLSKFNFTKQDVA--SMEKELYDIEYLL  223 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhcch--HHHH-------HHHHHHhc-ccHHHHHHHHHhhcceecchhh--hcCcchhhHHHHH
Confidence            356677777777766555544  1111       57778888 88888888888754  112221  1112344566655


Q ss_pred             h--cCCHHHHHHHHHhCCCCCCC---CCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           90 T--GGKSKLIEILMRYNPNLPNV---RDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        90 ~--~~~~~~~~~Ll~~~~~~~~~---~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      +  ..+..++++.+..|-.-++.   +-.+|.|-|--|..+++.+|+.+|+++|+
T Consensus       224 S~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  224 SEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             hhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            3  34677899999887554453   34578999999999999999999999998

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=95.09  E-value=0.63  Score=32.83  Aligned_cols=26  Identities=23%  Similarity=0.469  Sum_probs=12.9

Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHhCC
Q 036069           80 EGNACMVHAATGGKSKLIEILMRYNP  105 (174)
Q Consensus        80 ~g~~~l~~A~~~~~~~~~~~Ll~~~~  105 (174)
                      .|.|-|.-|..+++.+++..|+++|+
T Consensus       253 SGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  253 SGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             CcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            34444555555555555555555444

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=95.04  E-value=0.082  Score=30.50  Aligned_cols=47  Identities=11%  Similarity=0.201  Sum_probs=33.8

Q ss_pred             cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHh
Q 036069           46 SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRY  103 (174)
Q Consensus        46 t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~  103 (174)
                      ..+..|+. +|+.|+++.+++.+  .     .+   ...+..|+...+.++++||++.
T Consensus         8 ~tl~~Ai~-GGN~eII~~c~~~~--~-----~~---~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAII-GGNFEIINICLKKN--K-----PD---NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHh-CCCHHHHHHHHHHh--c-----cH---HHHHHHHHHHhhHHHHHHHHHh
Confidence            35678888 88888888887654  1     11   3467888888888888888875

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=93.98  E-value=0.23  Score=28.59  Aligned_cols=49  Identities=6%  Similarity=0.123  Sum_probs=40.3

Q ss_pred             hHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCccHHHHHHhhCCCHHHHHHHHhcc
Q 036069           10 VMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDKLVSKV   68 (174)
Q Consensus        10 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~t~L~~A~~~~g~~~~v~~Ll~~~   68 (174)
                      ..-+..|+..|+.+.++.+++.+   .++.      ..+..|+. ..+.+++++|++..
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~---~~~~------~~l~~AI~-~H~n~i~~~l~~~y   55 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKN---KPDN------DCLEYAIK-SHNNEIADWLIENY   55 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHh---ccHH------HHHHHHHH-HhhHHHHHHHHHhc
Confidence            35578999999999999999765   2221      37899999 99999999999864

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=91.53  E-value=3.2  Score=28.36  Aligned_cols=111  Identities=12%  Similarity=0.139  Sum_probs=68.5

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCccHHHHHHhhCCCHHHHHH----HHhccchhhhhhhccc--CC
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGLSIFDLIVNSDAPPMFLDK----LVSKVHQNFLQEWVSN--EG   81 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~t~L~~A~~~~g~~~~v~~----Ll~~~~~~~~~~~~d~--~g   81 (174)
                      ..++-+..||+..+.++|+|+-+.-  ..     ....+.+..|.. .++.++...    +.....+.  . ..|.  --
T Consensus        75 ~~q~LFElAC~~qkydiV~WI~qnL--~i-----~~~~~iFdIA~~-~kDlsLyslGY~l~~~~~~~~--~-~~d~~~ll  143 (192)
T PF03158_consen   75 LNQELFELACEEQKYDIVKWIGQNL--HI-----YNPEDIFDIAFA-KKDLSLYSLGYKLLFNRMMSE--H-NEDPTSLL  143 (192)
T ss_pred             HHHHHHHHHHHHccccHHHHHhhcc--CC-----CCchhhhhhhhh-ccchhHHHHHHHHHHhhcccc--c-ccCHHHHH
Confidence            4566678888888888888884443  11     112256777877 888765211    11111001  0 1111  12


Q ss_pred             chHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHh
Q 036069           82 NACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS  136 (174)
Q Consensus        82 ~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~  136 (174)
                      ..-|..|+..|-.+-+-..+.+|.+. +      .+.|..|+.+++..++.+++.
T Consensus       144 ~~hl~~a~~kgll~F~letlkygg~~-~------~~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  144 TQHLEKAAAKGLLPFVLETLKYGGNV-D------IIVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHHHCCCHHHHHHHHHcCCcc-c------HHHHHHHHHhhHHHHHHHhhc
Confidence            24466788888888777777777763 2      278888888888888888763

These proteins may be involved in promoting survival of infected macrophages [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	174
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-07
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	6e-04
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-06
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-04
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-04
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-06
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	5e-05
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	4e-04
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	6e-06
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	8e-06
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-05
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	8e-04
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-06
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-04
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-05
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-05
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-05
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	9e-05
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-04
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-04
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-05
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	9e-05
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-04
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-05
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	6e-05
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	8e-05
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	9e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-04
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-05
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-04
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	6e-04
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-05
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-04
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-04
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	9e-04
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-05
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-04
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	5e-05
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-04
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-04
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	5e-05
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-04
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	7e-04
3hra_A	201	Ankyrin repeat family protein; structural protein;	6e-05
3hra_A	201	Ankyrin repeat family protein; structural protein;	8e-04
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	6e-05
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	7e-04
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	7e-05
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	8e-05
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-04
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-04
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-04
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	8e-05
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	9e-05
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	8e-05
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	8e-05
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-04
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-04
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	6e-04
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-04
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-04
2etb_A	256	Transient receptor potential cation channel subfam	1e-04
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-04
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-04
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-04
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-04
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	6e-04
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	7e-04
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-04
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-04
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-04
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-04
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-04
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-04
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	7e-04
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-04
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-04
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	6e-04
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-04
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-04
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-04
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-04
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-04
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	8e-04
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	4e-04
2rfa_A	232	Transient receptor potential cation channel subfa	6e-04
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	6e-04
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	7e-04
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	8e-04
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	8e-04
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	8e-04
2pnn_A	273	Transient receptor potential cation channel subfa	9e-04

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 46.7 bits (112), Expect = 4e-07
 Identities = 12/60 (20%), Positives = 21/60 (35%)

Query: 78  SNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           S E    +      G +  + + +    N  N  D     P+H A + G    V  L+ +
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 37.8 bits (89), Expect = 6e-04
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           A   G+S ++E+L+       NV ++    P+H AA  GHRD V+ LL  
Sbjct: 46  ACREGRSAVVEMLIMRGAR-INVMNRGDDTPLHLAASHGHRDIVQKLLQY 94

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 45.1 bits (108), Expect = 1e-06
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
             A  G+   ++  +R   NL N  D+    P+  A+  G  +TVR+LL  
Sbjct: 8   QLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW 58

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 39.3 bits (93), Expect = 2e-04
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           A+TGG + ++ +L+  + +  N+ D +   P+  A +  H   V  LL++
Sbjct: 76  ASTGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLAR 124

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           +A  G   K +E L+    +       S   P+  A  LG+R   + + + 
Sbjct: 108 YAVRGNHVKCVEALLARGAD-LTTEADSGYTPMDLAVALGYRKVQQVIENH 157

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA  G    + +L R      +VRD    LP+  A +LGHRD  RYL + 
Sbjct: 85  AAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAA 133

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 40.5 bits (96), Expect = 5e-05
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKL-LPIHKAAQLGHRDTVRYLLSK 137
                G +++ E+L+ +    PN  D + L  P+H AA+ G  DT+  L   
Sbjct: 50  QVMMMGSARVAELLLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRA 100

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 37.8 bits (89), Expect = 4e-04
 Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 2/51 (3%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA  G+ + +  L+    N PN  +     PI      G       LL  
Sbjct: 18  TAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMMM-GSARVAELLLLH 66

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 44.2 bits (104), Expect = 6e-06
 Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 6/77 (7%)

Query: 79  NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVR----YL 134
            +G+  + +      ++ +++L+R   +   + ++S   P+  A +L H          L
Sbjct: 203 GKGSTALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQAL 261

Query: 135 LSKTTAHLDGH-DWSTL 150
             +  +H+    +W  L
Sbjct: 262 SGRFNSHVHVEYEWRLL 278

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 42.4 bits (101), Expect = 8e-06
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA  G    + +L R      +V D    LP+  A + GHRD  RYL + 
Sbjct: 85  AAREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKL-LPIHKAAQLGHRDTVRYLLSK 137
                G +++ E+L+ +    PN  D + L  P+H AA+ G  DT+  L   
Sbjct: 50  QVMMMGSAQVAELLLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRA 100

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 109 NVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           ++   S    +  AA  G  +TVR LL  
Sbjct: 6   HMLGGSSDAGLATAAARGQVETVRQLLEA 34

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 43.6 bits (104), Expect = 8e-06
 Identities = 11/59 (18%), Positives = 19/59 (32%)

Query: 79  NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
             G              +I   +    +L N  D++    +H AA+    D  + LL  
Sbjct: 21  GGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEA 79

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA  G  +  ++L+ +  N  ++ D    LP   A +  H D VR L  +
Sbjct: 196 LAAREGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDLE 245

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 43.3 bits (103), Expect = 1e-05
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 79  NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            + +  +  A +G + KL+ +L   N N  +  D  K  P+H AA       V+ LL  
Sbjct: 23  YKKDELLEAARSGNEEKLMALLTPLNVN-CHASDGRKSTPLHLAAGYNRVRIVQLLLQH 80

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 41.7 bits (99), Expect = 4e-05
 Identities = 7/55 (12%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAH 141
            AA+  + ++  +L+ +  + P + +      +  A     R+ + Y     +  
Sbjct: 130 EAASKNRVEVCSLLLSHGAD-PTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLL 183

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 41.3 bits (98), Expect = 5e-05
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA    + ++E+L ++     N  D      +H+AA  GH  T R LLS 
Sbjct: 253 VAAERAHNDVMEVLHKHGAK-MNALDSLGQTALHRAALAGHLQTCRLLLSY 302

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 40.6 bits (96), Expect = 9e-05
 Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA   + +++++L+++  +  + +DK  L+P+H A   GH +    LL  
Sbjct: 65  AAGYNRVRIVQLLLQHGAD-VHAKDKGGLVPLHNACSYGHYEVTELLLKH 113

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           +A + G  ++ E+L+++   + N  D  +  P+H+AA     +    LLS 
Sbjct: 97  NACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLSH 146

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 38.2 bits (90), Expect = 7e-04
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 88  AATGGKSKLIEI---LMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           A      K  ++   L+R   N  N ++K  + P+H AA+  H D +  L   
Sbjct: 218 AVASLHPKRKQVAELLLRKGAN-VNEKNKDFMTPLHVAAERAHNDVMEVLHKH 269

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 42.8 bits (102), Expect = 1e-05
 Identities = 21/59 (35%), Positives = 27/59 (45%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHD 146
           AA+ G  KLIE+L     +  N +DK    P+  A   GH D    L+ K  A  D  D
Sbjct: 147 AASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 205

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 40.1 bits (95), Expect = 9e-05
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 87  HAATGGKSKLIEILMRY--NPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            + +    ++   L+    N NL +  D S   P H A  +G+ + V+ L  +
Sbjct: 42  WSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDR 94

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 39.7 bits (94), Expect = 1e-04
 Identities = 10/57 (17%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLD 143
            A      ++ + L+    +   ++DK   +P+H+AA +G    +  L     + ++
Sbjct: 113 LAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVN 168

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 75  EWVSNEGNACMVHAATGGKSKLIEILMRY--NPNLPNVRDKSKLLPIHKAAQLGHRDTVR 132
            +V+ +G+  +  A        ++ L+ +       ++++      +H AA LG   TV 
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVE 62

Query: 133 YLLSK 137
            L + 
Sbjct: 63  KLYAA 67

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 41.0 bits (97), Expect = 6e-05
 Identities = 7/51 (13%), Positives = 15/51 (29%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            +    +++       +   L    +     P+H A      + VR L   
Sbjct: 131 DSQPNPENEEEPRDEDWRLQL-EAENYDGHTPLHVAVIHKDAEMVRLLRDA 180

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 40.6 bits (96), Expect = 8e-05
 Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA  G++  +E L         V ++     +H A ++        LL  
Sbjct: 52  AAILGEASTVEKLYAAGAG-VLVAERGGHTALHLACRVRAHTCACVLLQP 100

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 38.7 bits (91), Expect = 4e-04
 Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           A     + ++E+L++   + P  R      P+  A    +    R L + 
Sbjct: 199 AVEAQAASVLELLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAH 247

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           A+  G  KL++ L+++  +  N + K    P+H+AAQ GH D V  LL  
Sbjct: 318 ASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKN 366

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA  G +++ + L++      N + K    P+H AA++GH + V+ LL  
Sbjct: 54  AARAGHTEVAKYLLQNKAK-VNAKAKDDQTPLHCAARIGHTNMVKLLLEN 102

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA  G + ++++L+  N N PN+   +   P+H AA+ GH +TV  LL K
Sbjct: 87  AARIGHTNMVKLLLENNAN-PNLATTAGHTPLHIAAREGHVETVLALLEK 135

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA   + ++   L++Y  +  N      + P+H AAQ GH + V  LLSK
Sbjct: 219 AAKQNQVEVARSLLQYGGS-ANAESVQGVTPLHLAAQEGHAEMVALLLSK 267

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 10/50 (20%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            A  G   + ++L+++     +   +    P+H A+  G+   V++LL  
Sbjct: 285 VAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQH 333

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.1 bits (100), Expect = 3e-05
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA  G ++++ +L+    N  N+ +KS L P+H  AQ GH      L+  
Sbjct: 251 LAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHLVAQEGHVPVADVLIKH 300

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 41.7 bits (99), Expect = 4e-05
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 78  SNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           +  G+  +  AA  G  + +  L+    +      K    P+H AA+ G       LL +
Sbjct: 110 TTAGHTPLHIAAREGHVETVLALLEKEAS-QACMTKKGFTPLHVAAKYGKVRVAELLLER 168

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 41.7 bits (99), Expect = 4e-05
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           A+  G   +++ L++   + PNV +     P+H AA+ GH +  +YLL  
Sbjct: 21  ASFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYLLQN 69

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 40.9 bits (97), Expect = 7e-05
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA  GK ++ E+L+  + + PN   K+ L P+H A    + D V+ LL +
Sbjct: 153 AAKYGKVRVAELLLERDAH-PNAAGKNGLTPLHVAVHHNNLDIVKLLLPR 201

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 40.6 bits (96), Expect = 9e-05
 Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           A       ++++L+    + P+    +   P+H AA+    +  R LL  
Sbjct: 186 AVHHNNLDIVKLLLPRGGS-PHSPAWNGYTPLHIAAKQNQVEVARSLLQY 234

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKT 138
           AA  G + ++ +L++   + PN        P+  A +LG+      L   T
Sbjct: 351 AAQQGHTDIVTLLLKNGAS-PNEVSSDGTTPLAIAKRLGYISVTDVLKVVT 400

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 41.7 bits (99), Expect = 4e-05
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 78  SNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKS-KLLPIHKAAQLGHRDTVRYLLS 136
           + E N  ++ A       L++ L+    N  N +++     P+H A Q+   D V  LL 
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGAN-VNFQEEEGGWTPLHNAVQMSREDIVELLLR 60

Query: 137 K 137
            
Sbjct: 61  H 61

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 38.6 bits (91), Expect = 4e-04
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           +A    +  ++E+L+R+  + P +R K+   P   AA  G    ++  LSK
Sbjct: 45  NAVQMSREDIVELLLRHGAD-PVLRKKNGATPFLLAAIAGSVKLLKLFLSK 94

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 38.2 bits (90), Expect = 6e-04
 Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA  G  KL+++ +    +  N  D        +AA  G    +++L  +
Sbjct: 78  LAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKR 127

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 41.2 bits (98), Expect = 4e-05
 Identities = 11/47 (23%), Positives = 19/47 (40%)

Query: 91  GGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           G    +I   +    +L N  D++    +H AA+    D  + LL  
Sbjct: 1   GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEA 47

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 38.5 bits (91), Expect = 4e-04
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA  G  +  ++L+ +  N  ++ D    LP   A +  H D VR L   
Sbjct: 164 LAAREGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDEY 213

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 37.8 bits (89), Expect = 7e-04
 Identities = 10/51 (19%), Positives = 20/51 (39%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            A +     + +IL+R      + R      P+  AA+L     +  L++ 
Sbjct: 64  AAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS 114

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 37.4 bits (88), Expect = 9e-04
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA         +L++   N  ++++  +  P+  AA+ G  +T + LL  
Sbjct: 131 WAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDH 180

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 40.5 bits (96), Expect = 4e-05
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
                G + +   L++   + PNV+D S   P+H AA+ G  DT++ L+  
Sbjct: 41  QVMMFGSTAIALELLKQGAS-PNVQDTSGTSPVHDAARTGFLDTLKVLVEH 90

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 39.3 bits (93), Expect = 1e-04
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA  G    +++L+ +  +  NV D +  LPIH A Q GH   V +L ++
Sbjct: 74  DAARTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 41.4 bits (98), Expect = 5e-05
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA  G++  +  L+    + P ++++     +H A + G  DT +YL S 
Sbjct: 26  VAARKGQTDEVRRLIETGVS-PTIQNRFGCTALHLACKFGCVDTAKYLASV 75

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 7/51 (13%), Positives = 17/51 (33%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            A       +    +    +  N+ D    +P++ + +       + LL K
Sbjct: 217 WAILINWEDVAMRFVEMGID-VNMEDNEHTVPLYLSVRAAMVLLTKELLQK 266

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 7/60 (11%), Positives = 17/60 (28%), Gaps = 1/60 (1%)

Query: 78  SNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
                  +  AA   K +++++L      +      +      K  +       R  L+ 
Sbjct: 287 RVVWLDFVPAAADPSKQEVLQLLQEKLDEV-VRSLNTGAGGAVKRKKKAAPAVKRMKLAP 345

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 1/57 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLD 143
            AA  G    +   +       N  DK+    ++ A   GH+D V  L ++    L+
Sbjct: 79  EAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN 134

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 8/50 (16%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA  G + ++++L+       ++R+  K L    A        ++     
Sbjct: 147 AAWKGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGT 195

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 17/59 (28%), Positives = 28/59 (47%)

Query: 79  NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
             G+  +  A  GG   ++E+L        N ++K     +H AA  G+ D V+ LL+K
Sbjct: 104 KAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAK 162

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 40.9 bits (97), Expect = 6e-05
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 78  SNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           + E  A +  A      K+ EIL        +  D     P++ A      +  + L+ +
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQ-VDEVDTEGNTPLNIAVHNNDIEIAKALIDR 61

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 37.4 bits (88), Expect = 8e-04
 Identities = 11/54 (20%), Positives = 26/54 (48%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTA 140
           +A   G+++++  ++++     N  ++     +  AA+ GH D V+ LL     
Sbjct: 78  YAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRE 131

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 40.1 bits (95), Expect = 6e-05
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
                G  ++   L+    N P+++D++    IH AA+ G  DT++ LL  
Sbjct: 43  QVMKLGNPEIARRLLLRGAN-PDLKDRTGFAVIHDAARAGFLDTLQTLLEF 92

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 37.4 bits (88), Expect = 7e-04
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA  G    ++ L+ +  +  N+ D    LP+H AA+ GH   V +L+  
Sbjct: 76  DAARAGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKH 125

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 39.7 bits (94), Expect = 7e-05
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           +AA  G+ +++E L+    +  N  DK  + P+  A   GH   V+ LLSK
Sbjct: 46  YAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAVYEGHVSCVKLLLSK 95

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 40.5 bits (96), Expect = 8e-05
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           A   G   ++  LM+Y  + P++ D      IH AAQ GH   V YL++K
Sbjct: 83  ATRQGHLSMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAK 131

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 40.5 bits (96), Expect = 9e-05
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            A   G  +    L+    +     DK  +  +H AA     D V+Y +SK
Sbjct: 15  KATQYGIYERCRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISK 64

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 40.7 bits (95), Expect = 8e-05
 Identities = 8/59 (13%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 76  WVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYL 134
             + +GN  + +AA   +   +++L++         +++    +  A +  H++    L
Sbjct: 221 AKAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELL 278

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 40.6 bits (96), Expect = 8e-05
 Identities = 11/51 (21%), Positives = 17/51 (33%), Gaps = 2/51 (3%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           HA       ++   +   P+         L  IH   + GH D +  LL  
Sbjct: 135 HAVMLNDVSIVSYFLSEIPS--TFDLAILLSCIHITIKNGHVDMMILLLDY 183

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AAT   +K+++IL+    +  +  D      ++ A   G+  TV+  + K
Sbjct: 68  QAATLEDTKIVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKK 117

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 2/52 (3%)

Query: 86  VHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           +      KSK ++  +  + +     D       + A    +   V  LL+ 
Sbjct: 4   LSRINTWKSKQLKSFLS-SKD-TFKADVHGHSASYYAIADNNVRLVCTLLNA 53

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 38.3 bits (90), Expect = 6e-04
 Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLL-PIHKAAQLGHRDTVRYLLSK 137
           +A   G  + +++ ++ N        K+      + A  L     V Y LS+
Sbjct: 101 YAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE 151

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           A +G   +L E ++          D+     +H A   GH + V +LL  
Sbjct: 14  AYSGKLDELKERILADKSLA-TRTDQDSRTALHWACSAGHTEIVEFLLQL 62

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 38.9 bits (92), Expect = 1e-04
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 79  NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           ++    ++ AA  G+   + ILM    ++ N +D+  L P++ A   GH + V  LL  
Sbjct: 12  SDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKN 69

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 79  NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           +  N+ +V     G  ++   L         + +   L P+  AA+ G  +  R++L +
Sbjct: 186 SPENSALVIHMYDGLLQMGARLCPTVQLE-EISNHQGLTPLKLAAKEGKIEIFRHILQR 243

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 38.9 bits (92), Expect = 1e-04
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           A+  G    +E L++   + PNV+D +   P+H+A   GH   V  LL  
Sbjct: 17  ASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQH 65

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 38.2 bits (90), Expect = 3e-04
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           A   G  K++E+L+++   + N        P+H AA+ GH D V+ LLS 
Sbjct: 50  ACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHDAAKNGHVDIVKLLLSY 98

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 77  VSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS 136
           + ++    ++ AA  G+   + ILM    ++   +DK+   P+H AA+ GH + V+ LL 
Sbjct: 20  MGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLE 78

Query: 137 K 137
            
Sbjct: 79  A 79

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 77  VSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS 136
           V  +  A  + A + G ++ +  L+    +  N  +   L  +H+A    + D V++L+ 
Sbjct: 36  VKFDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACIDDNVDMVKFLVE 94

Query: 137 K 137
            
Sbjct: 95  N 95

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 38.2 bits (90), Expect = 6e-04
 Identities = 7/56 (12%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLD 143
           AA+ G   + E L+    ++    +     P+  A +    + ++  +++    ++
Sbjct: 113 AASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIE 167

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 37.9 bits (89), Expect = 7e-04
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA  G ++++++L++   +  N++D     P+H AA  G  +  R L+  
Sbjct: 206 AAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRILVEN 254

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 38.9 bits (92), Expect = 2e-04
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 79  NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           ++    ++ AA  G+   + ILM    ++ N  D S   P+H AA  GH + V  LL  
Sbjct: 12  SDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKN 69

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 38.9 bits (92), Expect = 2e-04
 Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
             A  G+   +   +     + N  D+    P+  AA  G    V +LL  
Sbjct: 9   QLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQN 58

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 38.5 bits (91), Expect = 3e-04
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           A  G   K +++L+    + P +   S    +  A  LG+R   + + S 
Sbjct: 109 AVHGNHVKCVKMLLESGAD-PTIETDSGYNSMDLAVALGYRSVQQVIESH 157

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 38.9 bits (92), Expect = 3e-04
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 79  NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           NE N C+  AA  G   + EIL+    +  +  +     P+H AA+    D V   LS+
Sbjct: 142 NEENICLHWAAFSGCVDIAEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLSR 199

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 38.5 bits (91), Expect = 3e-04
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA  G   +  +L++   N+ +   + +  P+ +AA+  H + V+YL+  
Sbjct: 18  AAEAGHVDICHMLVQAGANI-DTCSEDQRTPLMEAAENNHLEAVKYLIKA 66

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 38.5 bits (91), Expect = 4e-04
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            A       L+++L+    +  N+RD  + + +H AA  G  D    LL+ 
Sbjct: 117 WATEYKHVDLVKLLLSKGSD-INIRDNEENICLHWAAFSGCVDIAEILLAA 166

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 37.8 bits (89), Expect = 7e-04
 Identities = 18/59 (30%), Positives = 29/59 (49%)

Query: 79  NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            EG+ C+  AA  G  ++++ L+       N +D     P+  A +  H D V+ LLSK
Sbjct: 75  AEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK 133

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           A  GG    ++IL+++     N        P+  A   G  D V  LL  
Sbjct: 99  ACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQH 147

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA  G    +  L+       N+     + P+H+A   GH   V+ LL  
Sbjct: 65  EAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKH 114

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 38.2 bits (90), Expect = 6e-04
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA  G  + +  L+ Y  N  + +      P++ A +   R  V+ LL  
Sbjct: 163 EAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLES 212

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 6/52 (11%), Positives = 16/52 (30%), Gaps = 2/52 (3%)

Query: 88  AATGGKSKLIEILMRY--NPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA+    ++ + L+            D        +  + G+    ++L   
Sbjct: 110 AASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 161

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 10/59 (16%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 79  NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
               A ++ ++  G+  L++ ++    + P++ +   +  +H A   GH + V++L+  
Sbjct: 35  PLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITALHNAVCAGHTEIVKFLVQF 92

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           HA       ++++L+++  N+ N +  S    +H A+  G    VR L+  
Sbjct: 156 HAVENNSLSMVQLLLQHGANV-NAQMYSGSSALHSASGRGLLPLVRTLVRS 205

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 38.2 bits (90), Expect = 5e-04
 Identities = 9/51 (17%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            A+  G   L+  L+R   +  ++++     P+  A      D +R   ++
Sbjct: 189 SASGRGLLPLVRTLVRSGAD-SSLKNCHNDTPLMVARSRRVIDILRGKATR 238

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 38.2 bits (90), Expect = 5e-04
 Identities = 9/51 (17%), Positives = 17/51 (33%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            A       ++ +L+    + P   D+      H A +      +R LL  
Sbjct: 52  LAVITTLPSVVRLLVTAGAS-PMALDRHGQTAAHLACEHRSPTCLRALLDS 101

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 37.8 bits (89), Expect = 8e-04
 Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 96  LIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           L+ +  +    L ++ +  +  P+H A        VR L++ 
Sbjct: 28  LVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLLVTA 68

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 16/97 (16%), Positives = 29/97 (29%), Gaps = 7/97 (7%)

Query: 61  LDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSK--LLP 118
           LD L   +  + + + +  E       AA  G   ++  L    P    +          
Sbjct: 108 LDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPT-EIMAMIQAENYHA 166

Query: 119 IHKAAQLGHRDTVRYLLSK----TTAHLDGHDWSTLL 151
              AA+ GH   +  L        TA +   ++    
Sbjct: 167 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFR 203

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 4/54 (7%)

Query: 88  AATGGKSKLIEILMRYNPNL----PNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA     +   +LM   P L               +H A    + + VR LL++
Sbjct: 44  AALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLAR 97

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 36.2 bits (85), Expect = 6e-04
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA  G  +++++L+    +  N +DK+   P+H AA+ GH + V+ LL  
Sbjct: 42  AARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 36.6 bits (86), Expect = 7e-04
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 88  AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           AA  G ++++++L+    +  N R K    P H A + GH + V+ L +K
Sbjct: 49  AAKNGHAEIVKLLLAKGAD-VNARSKDGNTPEHLAKKNGHHEIVKLLDAK 97

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 37.0 bits (87), Expect = 8e-04
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            AA  G     E+L+R   +  + R K    P+H AA  GH + V  LL  
Sbjct: 40  LAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAASEGHANIVEVLLKH 89

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 37.3 bits (87), Expect = 8e-04
 Identities = 5/65 (7%), Positives = 15/65 (23%), Gaps = 6/65 (9%)

Query: 79  NEGNACMVHAATGGKSKLIEILMRYNPNL------PNVRDKSKLLPIHKAAQLGHRDTVR 132
                 +            E++  Y            ++DK  L  +    +      ++
Sbjct: 112 KPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALK 171

Query: 133 YLLSK 137
            +   
Sbjct: 172 MMEDY 176

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 37.8 bits (88), Expect = 9e-04
 Identities = 8/34 (23%), Positives = 15/34 (44%)

Query: 104 NPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
              L  + ++  L P+  AA  G    + Y+L +
Sbjct: 222 TLKLEEITNRKGLTPLALAASSGKIGVLAYILQR 255

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	174
4gpm_A	169	Engineered protein OR264; de novo protein, structu	100.0
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	100.0
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	100.0
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	100.0
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	100.0
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.98
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.98
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.98
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.97
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.97
2rfa_A	232	Transient receptor potential cation channel subfa	99.97
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.97
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.97
2rfa_A	232	Transient receptor potential cation channel subfa	99.97
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.97
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.97
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.97
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.97
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.97
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.97
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.97
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.97
2etb_A	256	Transient receptor potential cation channel subfam	99.97
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.97
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.97
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.97
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.97
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.97
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.97
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.97
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.97
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.97
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.97
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.97
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.97
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.97
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.97
2pnn_A	273	Transient receptor potential cation channel subfa	99.97
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.97
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.97
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.97
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.97
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.97
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.97
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.96
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.96
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.96
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.96
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.96
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.96
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.96
2etb_A	256	Transient receptor potential cation channel subfam	99.96
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.96
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.96
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.96
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.96
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.96
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.96
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.96
2pnn_A	273	Transient receptor potential cation channel subfa	99.96
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.96
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.96
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.96
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.96
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.95
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.95
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.95
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.95
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.95
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.95
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.95
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.95
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.95
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.95
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.95
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.95
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.94
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.94
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.94
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.94
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.94
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.94
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.94
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.94
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.94
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.93
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.93
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.93
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.93
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.93
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.93
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.93
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.92
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.92
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.92
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.92
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.92
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.92
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.92
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.91
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.91
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.91
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.9
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.89
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.89
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.88
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.87
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.87
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.87
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.86
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.86
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.85
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.83
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.81

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=100.00  E-value=8.9e-35  Score=195.03  Aligned_cols=146  Identities=17%  Similarity=0.216  Sum_probs=138.8

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHH
Q 036069           11 MQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAA   89 (174)
Q Consensus        11 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~   89 (174)
                      ++|+.|++.|+.++|+.|++.|  ++++.+ +..| ||||+|+. .++.+++++|++.+  .+++ .+|..|.||||+|+
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~G--advn~~-d~~g~t~l~~a~~-~~~~~~~~~ll~~g--ad~~-~~d~~g~TpLh~A~   78 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENG--ADVNAS-DSDGRTPLHHAAE-NGHKEVVKLLISKG--ADVN-AKDSDGRTPLHHAA   78 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTSCCHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCC--CCCCCc-CCCCCCHHHHHHH-cCCHHHHHHHHhcc--cchh-hhccCCCCHHHHHH
Confidence            5799999999999999999999  999977 8888 99999999 99999999999999  8888 99999999999999


Q ss_pred             hcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069           90 TGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus        90 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      ..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|+ .+.++.+|.|||++|+..|+.+++-
T Consensus        79 ~~g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~  153 (169)
T 4gpm_A           79 ENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVK  153 (169)
T ss_dssp             HTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             HcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence            99999999999999999 59999999999999999999999999999999 7779999999999999999988763

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=100.00  E-value=5.4e-33  Score=189.68  Aligned_cols=152  Identities=15%  Similarity=0.049  Sum_probs=142.6

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .|..|.||||.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.|
T Consensus        31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t  103 (192)
T 2rfm_A           31 RDSYNRTPLMVACMLGMENAIDKLVENF--DKLEDK-DIEGSTALIWAVK-NNRLGIAEKLLSKG--SNVN-TKDFSGKT  103 (192)
T ss_dssp             CCTTCCCHHHHHHHHTCGGGHHHHHHHH--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHHT--CCTT-CCCTTSCC
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHhc--cccccc-cccCccHHHHHHH-cCCHHHHHHHHHCC--CCCC-CCCCCCCc
Confidence            4678999999999999999999999999  888866 7778 99999999 99999999999998  7888 89999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGK  162 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~  162 (174)
                      |||+|+..++.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|+ .+.++..|.||+++|+..|+.++
T Consensus       104 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~  182 (192)
T 2rfm_A          104 PLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEV  182 (192)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHH
Confidence            99999999999999999999999 59999999999999999999999999999998 77789999999999999999887


Q ss_pred             cc
Q 036069          163 YY  164 (174)
Q Consensus       163 ~~  164 (174)
                      +.
T Consensus       183 v~  184 (192)
T 2rfm_A          183 IK  184 (192)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=100.00  E-value=1.5e-32  Score=183.52  Aligned_cols=150  Identities=11%  Similarity=0.092  Sum_probs=140.4

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHH
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMV   86 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~   86 (174)
                      +|.||||.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.||||
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t~L~   74 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQE--NVINHT-DEEGFTPLMWAAA-HGQIAVVEFLLQNG--ADPQ-LLGKGRESALS   74 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHS--SCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTCCCHHH
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcC--CCcCCC-CCCCCCHHHHHHH-CCCHHHHHHHHHcC--CCCC-CcCCCCCcHHH
Confidence            5789999999999999999999999  888866 7888 99999999 99999999999998  7788 89999999999


Q ss_pred             HHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccccc
Q 036069           87 HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYYS  165 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~  165 (174)
                      +|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|+ ...++..|.|||++|+..|+.+++..
T Consensus        75 ~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~  153 (167)
T 3v31_A           75 LACSKGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQV  153 (167)
T ss_dssp             HHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence            99999999999999999999 59999999999999999999999999999998 67789999999999999999887643

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=100.00  E-value=7e-32  Score=180.78  Aligned_cols=151  Identities=15%  Similarity=0.120  Sum_probs=140.3

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      ...+.++|+.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.||
T Consensus        11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t~   83 (169)
T 2y1l_E           11 GSDLGKKLLEAARAGRDDEVRILMANG--ADVNAE-DASGWTPLHLAAF-NGHLEIVEVLLKNG--ADVN-AVDHAGMTP   83 (169)
T ss_dssp             --CHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTSCCH
T ss_pred             CCcccchHHHHHHcCCHHHHHHHHHCC--CCCCCC-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-ccCCCCCCH
Confidence            345789999999999999999999999  888866 7888 99999999 99999999999998  8888 899999999


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|+ .+.++..|.|||+.|+..|+.+++
T Consensus        84 L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~  162 (169)
T 2y1l_E           84 LRLAALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLA  162 (169)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHH
Confidence            9999999999999999999999 59999999999999999999999999999998 677899999999999999998876


Q ss_pred             c
Q 036069          164 Y  164 (174)
Q Consensus       164 ~  164 (174)
                      .
T Consensus       163 ~  163 (169)
T 2y1l_E          163 E  163 (169)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=100.00  E-value=6.7e-32  Score=178.06  Aligned_cols=147  Identities=14%  Similarity=0.087  Sum_probs=136.6

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHH
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMV   86 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~   86 (174)
                      +..++|+.|+..|+.+++++|++.+  .+++ . +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.||||
T Consensus         1 d~~~~L~~A~~~g~~~~v~~Ll~~g--~~~~-~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t~L~   72 (153)
T 1awc_B            1 DLGKKLLEAARAGQDDEVRILMANG--APFT-T-DWLGTSPLHLAAQ-YGHFSTTEVLLRAG--VSRD-ARTKVDRTPLH   72 (153)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHHT--CCCC-C-CTTCCCHHHHHHH-HTCHHHHHHHHTTT--CCTT-CCCTTCCCHHH
T ss_pred             CccHHHHHHHHcCCHHHHHHHHHcC--CCCC-c-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-CCCCCCCCHHH
Confidence            3578999999999999999999999  6655 3 6777 99999999 99999999999998  7788 89999999999


Q ss_pred             HHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           87 HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      +|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+ .+.++..|.|||++|+..|+.+++
T Consensus        73 ~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~  149 (153)
T 1awc_B           73 MAASEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLA  149 (153)
T ss_dssp             HHHHHTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             HHHHcChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence            99999999999999999999 59999999999999999999999999999998 677899999999999999998876

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.98  E-value=1e-31  Score=180.31  Aligned_cols=150  Identities=13%  Similarity=0.087  Sum_probs=137.3

Q ss_pred             hhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHH
Q 036069            9 SVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVH   87 (174)
Q Consensus         9 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~   87 (174)
                      +.+|||.|+..|+.+.++.+++.+ +..++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.||||+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t~L~~   75 (172)
T 3v30_A            2 DSLSIHQLAAQGELDQLKEHLRKG-DNLVNKP-DERGFTPLIWASA-FGEIETVRFLLEWG--ADPH-ILAKERESALSL   75 (172)
T ss_dssp             --CCHHHHHHTTCHHHHHHHHTTC-SGGGGCC-CTTSCCHHHHHHH-TTCHHHHHHHHHHT--CCTT-CCCTTCCCHHHH
T ss_pred             chhhHHHHHHcCCHHHHHHHHHcC-cccccCC-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCch-hhcccCCCHHHH
Confidence            468999999999999999999999 4447755 7788 99999999 99999999999998  8888 899999999999


Q ss_pred             HHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccccc
Q 036069           88 AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYYS  165 (174)
Q Consensus        88 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~  165 (174)
                      |+..++.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|+ .+.++..|.|||++|+..|+.+++.-
T Consensus        76 A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~  153 (172)
T 3v30_A           76 ASTGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV  153 (172)
T ss_dssp             HHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred             HHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHH
Confidence            9999999999999999999 59999999999999999999999999999998 77789999999999999999887643

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.98  E-value=5.9e-32  Score=180.31  Aligned_cols=152  Identities=16%  Similarity=0.152  Sum_probs=137.3

Q ss_pred             cccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCc
Q 036069            4 ITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGN   82 (174)
Q Consensus         4 ~~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~   82 (174)
                      +.+.++.+||+.|+..|+.++++.|++.+ +..++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.
T Consensus         3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~   76 (165)
T 3twr_A            3 MGNSEADRQLLEAAKAGDVETVKKLCTVQ-SVNCRDI-EGRQSTPLHFAAG-YNRVSVVEYLLQHG--ADVH-AKDKGGL   76 (165)
T ss_dssp             ---CHHHHHHHHHHHHTCHHHHHHHCCTT-TTTCCCT-TTTCCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTSC
T ss_pred             CCcchhhHHHHHHHHhCCHHHHHHHHHcC-CCCcccc-ccCCCCHHHHHHH-cChHHHHHHHHhcC--CCCC-ccCCCCC
Confidence            46788999999999999999999999977 5666644 7777 99999999 99999999999999  8888 8999999


Q ss_pred             hHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccc
Q 036069           83 ACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFG  161 (174)
Q Consensus        83 ~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~  161 (174)
                      ||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|+ .+.++..|.|||++|+. |+.+
T Consensus        77 t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~  154 (165)
T 3twr_A           77 VPLHNACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTD  154 (165)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHH
T ss_pred             CHHHHHHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChH
Confidence            999999999999999999999999 59999999999999999999999999999998 77799999999999877 6666


Q ss_pred             cc
Q 036069          162 KY  163 (174)
Q Consensus       162 ~~  163 (174)
                      ++
T Consensus       155 i~  156 (165)
T 3twr_A          155 IQ  156 (165)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.98  E-value=1.8e-32  Score=196.49  Aligned_cols=147  Identities=14%  Similarity=0.095  Sum_probs=137.9

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .|.+|.||||+|+..|+.+++++|++.+  ++++.. +..| ||+|+|+. .++.+++++|++.+  .+++ .+|..|.|
T Consensus        82 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~~--a~~~~~-~~~g~t~l~~a~~-~~~~~~~~~Ll~~g--~~~n-~~d~~g~T  154 (269)
T 4b93_B           82 TSQDGSSPLHVAALHGRADLIPLLLKHG--ANAGAR-NADQAVPLHLACQ-QGHFQVVKCLLDSN--AKPN-KKDLSGNT  154 (269)
T ss_dssp             CCTTSCCHHHHHHHTTCTTHHHHHHHTT--CCTTCC-CTTCCCHHHHHHH-HTCHHHHHHHHHTT--CCSC-CCCTTCCC
T ss_pred             cCCCCCCHHHHHHHcCcHHHHHHHHhcC--CCcCcc-CCCCCCccccccc-cChHHHHHHHHHCC--CCCC-CCCCCCCC
Confidence            4678999999999999999999999999  888866 7778 99999999 99999999999999  8888 99999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNL  159 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~  159 (174)
                      |||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++|+ .+.++..|.|||++|++++.
T Consensus       155 pL~~A~~~g~~~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~  230 (269)
T 4b93_B          155 PLIYACSGGHHELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK  230 (269)
T ss_dssp             HHHHHHHTTCGGGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence            99999999999999999999999 59999999999999999999999999999999 77899999999999988775

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.97  E-value=4e-31  Score=174.68  Aligned_cols=149  Identities=15%  Similarity=0.109  Sum_probs=137.5

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHH
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMV   86 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~   86 (174)
                      ++.+||+.|+..|+.++++.|++.. +.+++.. +..| ||||+ +. .|+.+++++|++.+  .+++ .+|..|.||||
T Consensus         1 r~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~-~~~g~t~L~~-~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t~L~   73 (156)
T 1bd8_A            1 RAGDRLSGAAARGDVQEVRRLLHRE-LVHPDAL-NRFGKTALQV-MM-FGSTAIALELLKQG--ASPN-VQDTSGTSPVH   73 (156)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHTT-CCCTTCC-CTTSCCHHHH-SC-TTCHHHHHHHHHTT--CCTT-CCCTTSCCHHH
T ss_pred             CcchHHHHHHHhCCHHHHHHHHHhh-CcCcccc-CCCCCcHHHH-HH-cCCHHHHHHHHHCC--CCCC-CcCCCCCCHHH
Confidence            4689999999999999999999985 5788866 7788 99999 99 99999999999998  8888 89999999999


Q ss_pred             HHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccccc
Q 036069           87 HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYYS  165 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~  165 (174)
                      +|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++. + .+.++..|.|||++|+..|+.+++.-
T Consensus        74 ~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~  151 (156)
T 1bd8_A           74 DAARTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDI  151 (156)
T ss_dssp             HHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHH
T ss_pred             HHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence            99999999999999999998 599999999999999999999999999999 5 66789999999999999999887743

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.97  E-value=1.8e-31  Score=189.44  Aligned_cols=152  Identities=11%  Similarity=0.048  Sum_probs=95.0

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccc--h------------
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVH--Q------------   70 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~--~------------   70 (174)
                      +.+|.||||.|+..|+.++++.|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+.  .            
T Consensus        54 d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~  129 (253)
T 1yyh_A           54 DRTGETALHLAARYSRSDAAKRLLEAS--ADANIQ-DNMGRTPLHAAVS-ADAQGVFQILIRNRATDLDARMHDGTTPLI  129 (253)
T ss_dssp             CTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-HTCHHHHHHHHHSTTSCTTCCCTTCCCHHH
T ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCCCC-CCCCCCHHHHHHH-cCCHHHHHHHHHcCCCCccccCCCCCcHHH
Confidence            445556666666666666666666555  555544 4444 55555555 555555555555430  0            


Q ss_pred             ------------------hhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHH
Q 036069           71 ------------------NFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVR  132 (174)
Q Consensus        71 ------------------~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~  132 (174)
                                        .+++ ..|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.++++
T Consensus       130 ~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~  207 (253)
T 1yyh_A          130 LAARLAVEGMLEDLINSHADVN-AVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAK  207 (253)
T ss_dssp             HHHHHTCSSHHHHHHHTTCCTT-CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred             HHHHcChHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHH
Confidence                              3344 5566667777777777777777777777666 4666667777777777777777777


Q ss_pred             HHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069          133 YLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       133 ~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      +|+++|+ .+.++..|.||+++|+..|+.+++
T Consensus       208 ~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~  239 (253)
T 1yyh_A          208 VLLDHFANRDITDHMDRLPRDIAQERMHHDIV  239 (253)
T ss_dssp             HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred             HHHHcCCCccccccCCCCHHHHHHHcCCHHHH
Confidence            7777766 555666777777777777776665

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.97  E-value=6.1e-31  Score=184.17  Aligned_cols=148  Identities=15%  Similarity=0.031  Sum_probs=134.6

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHc-CCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhh-----hhhcccC
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMS-KTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFL-----QEWVSNE   80 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~-~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~-----~~~~d~~   80 (174)
                      .|.||||.|+..|+.++++.|++. +  .+++.. +..| ||||+|+. .|+.+++++|++.+  .++     . ..|..
T Consensus         2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g--~~~~~~-~~~g~t~L~~A~~-~g~~~~v~~Ll~~~--~~~~~~~~~-~~~~~   74 (232)
T 2rfa_A            2 IWESPLLLAAKENDVQALSKLLKFEG--CEVHQR-GAMGETALHIAAL-YDNLEAAMVLMEAA--PELVFEPMT-SELYE   74 (232)
T ss_dssp             CTTCHHHHHHHTTCHHHHHHHHTTTC--SCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHHC--GGGGGCCCC-STTTT
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHhcC--CCcccC-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--chhcccccc-ccCCC
Confidence            488999999999999999999998 6  889866 8888 99999999 99999999999998  544     4 56778


Q ss_pred             CchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCC-------------CCccHHHHHHhcCChHHHHHHHhcCC-CcccCCC
Q 036069           81 GNACMVHAATGGKSKLIEILMRYNPNLPNVRDK-------------SKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHD  146 (174)
Q Consensus        81 g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-------------~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~  146 (174)
                      |.||||+|+..|+.+++++|++.|++ ++..+.             .|.||||+|+..|+.+++++|+++|+ .+.++..
T Consensus        75 g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~  153 (232)
T 2rfa_A           75 GQTALHIAVINQNVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSL  153 (232)
T ss_dssp             TCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred             CcCHHHHHHHcCCHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence            99999999999999999999999988 476654             79999999999999999999999998 7778999


Q ss_pred             CcchHHHHHHcCccccc
Q 036069          147 WSTLLKDLINCNLFGKY  163 (174)
Q Consensus       147 g~t~l~~a~~~~~~~~~  163 (174)
                      |.||||+|+..|+.+++
T Consensus       154 g~t~L~~A~~~~~~~~~  170 (232)
T 2rfa_A          154 GNTVLHILILQPNKTFA  170 (232)
T ss_dssp             SCCHHHHHHTCSCHHHH
T ss_pred             CCCHHHHHHHcCChHHH
Confidence            99999999999998765

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.97  E-value=3.2e-31  Score=190.15  Aligned_cols=154  Identities=10%  Similarity=-0.005  Sum_probs=125.8

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccc--------------
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVH--------------   69 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~--------------   69 (174)
                      .+..|.||||.|+..|+.+++++|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+.              
T Consensus        41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~-~~~g~tpL~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~  116 (282)
T 1oy3_D           41 QNDLGQTALHLAAILGEASTVEKLYAAG--AGVLVA-ERGGHTALHLACR-VRAHTCACVLLQPRPSHPRDASDTYLTQS  116 (282)
T ss_dssp             CCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCSSCC-CTTSCCHHHHHTT-TTCHHHHHHHSSSCCSSCCCC--------
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCC-CCCCCCHHHHHHH-cCCcchhHhhhccCCCCchhhHHHHhhcc
Confidence            3556888888888888888888888888  777755 6677 88888888 888888888887540              


Q ss_pred             -------------------------------hhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCC-CCcc
Q 036069           70 -------------------------------QNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDK-SKLL  117 (174)
Q Consensus        70 -------------------------------~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~~~t  117 (174)
                                                     ...++ ..|..|.||||+|+..|+.+++++|++.|++ ++.++. .|.|
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~t  194 (282)
T 1oy3_D          117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE-AENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRT  194 (282)
T ss_dssp             ---------------------------CCCGGGGTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCC
T ss_pred             cccCcchhcchhhhccccccchhhhhhhhhhhhcCC-CcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcC
Confidence                                           01244 5677889999999999999999999999988 477765 4999


Q ss_pred             HHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          118 PIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       118 pl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      |||+|+..|+.+++++|+++|+ .+.++..|.||||+|+..|+.+++.
T Consensus       195 pL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~  242 (282)
T 1oy3_D          195 PLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILAR  242 (282)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHH
Confidence            9999999999999999999988 7778889999999999999877763

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.97  E-value=6.5e-31  Score=180.24  Aligned_cols=155  Identities=12%  Similarity=0.086  Sum_probs=136.7

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+.+|.||||.|+..|+.+++++|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+ ..+++ ..|..|.|
T Consensus        35 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~l~~A~~-~~~~~~~~~Ll~~~-~~~~~-~~~~~g~t  108 (201)
T 3hra_A           35 VDTEGNTPLNIAVHNNDIEIAKALIDRG--ADINLQ-NSISDSPYLYAGA-QGRTEILAYMLKHA-TPDLN-KHNRYGGN  108 (201)
T ss_dssp             CCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHHS-CCCTT-CCCTTSCC
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCC-CCCCCCHHHHHHH-cCCHHHHHHHHhcc-Ccccc-cccCCCCc
Confidence            3567899999999999999999999999  888866 7778 99999999 99999999999554 25666 88889999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhC-CCCCCCCCCCCccHHHHHHhcCC-----hHHHHHHHhcCC-CcccCCCCcchHHHHHH
Q 036069           84 CMVHAATGGKSKLIEILMRYN-PNLPNVRDKSKLLPIHKAAQLGH-----RDTVRYLLSKTT-AHLDGHDWSTLLKDLIN  156 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~tpl~~a~~~~~-----~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~  156 (174)
                      |||+|+..|+.+++++|++.+ .+ ++.+|..|.||||+|+..++     .+++++|++.|+ .+.++..|.|||++|+.
T Consensus       109 ~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~  187 (201)
T 3hra_A          109 ALIPAAEKGHIDNVKLLLEDGRED-IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQ  187 (201)
T ss_dssp             SHHHHHHTTCHHHHHHHHHHCCCC-TTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCC-cCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Confidence            999999999999999999998 55 68899999999999999987     899999999998 77788999999999999


Q ss_pred             cCcccccccc
Q 036069          157 CNLFGKYYSA  166 (174)
Q Consensus       157 ~~~~~~~~~~  166 (174)
                      .|+.+++..+
T Consensus       188 ~~~~~~~~~L  197 (201)
T 3hra_A          188 KGYTEISKIL  197 (201)
T ss_dssp             HTCHHHHHHH
T ss_pred             cCCHhHHHHH
Confidence            9998877443

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.97  E-value=5.7e-31  Score=184.34  Aligned_cols=153  Identities=11%  Similarity=0.027  Sum_probs=136.1

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccc-----cccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcc
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTL-----TDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVS   78 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~-----~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d   78 (174)
                      .|.+|.||||.|+..|+.+++++|++.+  .++     +.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..+
T Consensus        33 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~  105 (232)
T 2rfa_A           33 RGAMGETALHIAALYDNLEAAMVLMEAA--PELVFEPMTSE-LYEGQTALHIAVI-NQNVNLVRALLARG--ASVS-ARA  105 (232)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHHC--GGGGGCCCCST-TTTTCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCC
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHcC--chhcccccccc-CCCCcCHHHHHHH-cCCHHHHHHHHhCC--CCCC-ccc
Confidence            4678999999999999999999999999  665     322 5567 99999999 99999999999998  6666 554


Q ss_pred             c-------------CCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHH----HHHHhcCC-C
Q 036069           79 N-------------EGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTV----RYLLSKTT-A  140 (174)
Q Consensus        79 ~-------------~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~----~~ll~~~~-~  140 (174)
                      .             .|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++    ++|++.|+ .
T Consensus       106 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~  184 (232)
T 2rfa_A          106 TGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD-IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD  184 (232)
T ss_dssp             CSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred             CCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence            4             799999999999999999999999999 599999999999999999999988    99999998 4


Q ss_pred             ------cccCCCCcchHHHHHHcCccccccc
Q 036069          141 ------HLDGHDWSTLLKDLINCNLFGKYYS  165 (174)
Q Consensus       141 ------~~~~~~g~t~l~~a~~~~~~~~~~~  165 (174)
                            ..++..|.|||++|+..|+.+++..
T Consensus       185 ~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~  215 (232)
T 2rfa_A          185 HLKSLELVPNNQGLTPFKLAGVEGNIVMFQH  215 (232)
T ss_dssp             SSCCGGGCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred             hhhhhhccCCCCCCCHHHHHHHcCCHHHHHH
Confidence                  3588999999999999999888743

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.97  E-value=8e-31  Score=182.47  Aligned_cols=151  Identities=13%  Similarity=0.045  Sum_probs=97.8

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      |.+|.||||.|+..|+.+++++|++.+  ++++.. +..| ||||+|+. .|+.+++++|++.+ +..++ ..+..|.||
T Consensus        22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~~-~~~~~-~~~~~g~t~   95 (223)
T 2f8y_A           22 DRTGETALHLAARYSRSDAAKRLLEAS--ADANIQ-DNMGRTPLHAAVS-ADAQGVFQILIRNR-ATDLD-ARMHDGTTP   95 (223)
T ss_dssp             TTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHBT-TSCTT-CCCTTCCCH
T ss_pred             CCCCCchHHHHHHcCCHHHHHHHHHcC--CCCCCc-CCCCCCHHHHHHH-cCCHHHHHHHHHcC-CCCcc-cCCCCCCcH
Confidence            456777777777777777777777777  666655 6666 77777777 77777777777765 11444 555566666


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ||+|+..++.+++++|++.+++ ++.++..|.||||+|+..|+.+++++|++.|+ .+..+..|.|||+.|+..|+.+++
T Consensus        96 L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v  174 (223)
T 2f8y_A           96 LILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA  174 (223)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred             HHHHHHhCcHHHHHHHHHcCCC-CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHH
Confidence            6666666666666666666655 35556666666666666666666666666655 444555666666666666655544

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.97  E-value=2.7e-31  Score=188.53  Aligned_cols=144  Identities=13%  Similarity=0.076  Sum_probs=96.7

Q ss_pred             HHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcC
Q 036069           14 TRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGG   92 (174)
Q Consensus        14 ~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~   92 (174)
                      ..+...++.++++.|++.+  .+++...+..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.||||+|+..|
T Consensus        28 ~~~~~~~~~~~v~~Ll~~g--~~~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~g--~~~~-~~~~~g~t~L~~A~~~~  101 (253)
T 1yyh_A           28 NSEEEEDAPAVISDFIYQG--ASLHNQTDRTGETALHLAAR-YSRSDAAKRLLEAS--ADAN-IQDNMGRTPLHAAVSAD  101 (253)
T ss_dssp             --------------------------CCCTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTSCCHHHHHHHHT
T ss_pred             chhhcCCChHHHHHHHHcc--CCcccccCCCCCcHHHHHHH-cCCHHHHHHHHHcC--CCCC-CCCCCCCCHHHHHHHcC
Confidence            4477889999999999999  77765557788 99999999 99999999999998  7777 88888999999999999


Q ss_pred             CHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           93 KSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        93 ~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      +.+++++|++.++..++.++..|.||||+|+..|+.+++++|++.|+ .+..+..|.||||.|+..|+.+++
T Consensus       102 ~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v  173 (253)
T 1yyh_A          102 AQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAA  173 (253)
T ss_dssp             CHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHH
T ss_pred             CHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence            99999999888763356777777777777777777777777777776 555667777777777777766655

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.97  E-value=7.7e-31  Score=183.47  Aligned_cols=150  Identities=17%  Similarity=0.172  Sum_probs=123.0

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      +.+|.||||.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.||
T Consensus        37 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t~  109 (231)
T 3aji_A           37 DQDSRTALHWACSAGHTEIVEFLLQLG--VPVNDK-DDAGWSPLHIAAS-AGXDEIVKALLVKG--AHVN-AVNQNGCTP  109 (231)
T ss_dssp             CTTSCCHHHHHHHHTCHHHHHHHHHTT--CCSCCC-CTTSCCHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCTTSCCH
T ss_pred             CCCCCCHHHHHHHcCcHHHHHHHHHhC--CCCCCc-CCCCCCHHHHHHH-cCHHHHHHHHHHcC--CCCC-CCCCCCCCH
Confidence            566888888888888888888888888  777755 6677 88888888 88888888888887  6677 778888888


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ||+|+..++.+++++|++.+.+ ++.++..|.||||+|+..|+.+++++|++.++ .+.++..|.||||+|+..|+.+++
T Consensus       110 L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v  188 (231)
T 3aji_A          110 LHYAASKNRHEIAVMLLEGGAN-PDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEA  188 (231)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHH
Confidence            8888888888888888888887 47778888888888888888888888888877 666777888888888888877665

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.97  E-value=7.4e-31  Score=175.95  Aligned_cols=129  Identities=16%  Similarity=0.201  Sum_probs=119.9

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .|.+|.||||.|+..++.++++.|++.|  ++++.+ +..| ||||+|+. .|+.+++++|++.+  ++++ .+|..|.|
T Consensus        33 ~d~~g~t~l~~a~~~~~~~~~~~ll~~g--ad~~~~-d~~g~TpLh~A~~-~g~~~~v~~Ll~~g--advn-~~d~~G~T  105 (169)
T 4gpm_A           33 SDSDGRTPLHHAAENGHKEVVKLLISKG--ADVNAK-DSDGRTPLHHAAE-NGHKEVVKLLISKG--ADVN-AKDSDGRT  105 (169)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTSCC
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHhcc--cchhhh-ccCCCCHHHHHHH-cCCHHHHHHHHHCc--CCCC-CCCCCCCC
Confidence            4678999999999999999999999999  999977 8888 99999999 99999999999999  8888 99999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-Cc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AH  141 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~  141 (174)
                      |||+|+..|+.+++++|++.|++ ++.+|..|+|||++|+..|+.+++++|+++|+ .+
T Consensus       106 pLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie  163 (169)
T 4gpm_A          106 PLHHAAENGHKEVVKLLISKGAD-VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE  163 (169)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence            99999999999999999999999 59999999999999999999999999999998 44

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.97  E-value=1.2e-30  Score=181.57  Aligned_cols=154  Identities=14%  Similarity=0.088  Sum_probs=142.2

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+..|.||||.|+..|+.+++++|++.+ +..++.. +..+ ||||+|+. .|+.+++++|++.+  .+++ ..|..|.|
T Consensus        54 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~-~~~g~t~L~~A~~-~~~~~~~~~Ll~~g--~~~~-~~~~~g~t  127 (223)
T 2f8y_A           54 QDNMGRTPLHAAVSADAQGVFQILIRNR-ATDLDAR-MHDGTTPLILAAR-LAVEGMLEDLINSH--ADVN-AVDDLGKS  127 (223)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHBT-TSCTTCC-CTTCCCHHHHHHH-HTCHHHHHHHHHTT--CCTT-CBCTTSCB
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccC-CCCCCcHHHHHHH-hCcHHHHHHHHHcC--CCCc-CcCCCCCc
Confidence            4567999999999999999999999998 4477755 7778 99999999 99999999999998  8788 89999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGK  162 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~  162 (174)
                      |||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+ .+.++..|.||+++|+..|+.++
T Consensus       128 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i  206 (223)
T 2f8y_A          128 ALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDI  206 (223)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHH
Confidence            99999999999999999999998 59999999999999999999999999999999 77789999999999999999887


Q ss_pred             ccc
Q 036069          163 YYS  165 (174)
Q Consensus       163 ~~~  165 (174)
                      +--
T Consensus       207 ~~~  209 (223)
T 2f8y_A          207 VRL  209 (223)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.97  E-value=3.3e-31  Score=190.55  Aligned_cols=154  Identities=16%  Similarity=0.160  Sum_probs=140.4

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHH-----hhCCCHHHHHHHHhccchhhhhhhcc
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIV-----NSDAPPMFLDKLVSKVHQNFLQEWVS   78 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~-----~~~g~~~~v~~Ll~~~~~~~~~~~~d   78 (174)
                      .|.+|.||||.|+..|+.++++.|++.| ..+++.. +..| ||||+|+     . .++.+++++|++.+  .... ..+
T Consensus       107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g-~~~~~~~-~~~g~tpL~~a~~~~~~~-~~~~~~v~~Ll~~g--~~~~-~~~  180 (276)
T 4hbd_A          107 ADSNGNTALHYSVSHANFPVVQQLLDSG-VCKVDKQ-NRAGYSPIMLTALATLKT-QDDIETVLQLFRLG--NINA-KAS  180 (276)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHTS-CCCTTCC-CTTSCCHHHHGGGCCCCS-HHHHHHHHHHHHHS--CTTC-CCT
T ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCcCCCC-CCCCCCHHHHHHHHHhhh-hhhHHHHHHHHHcC--CCcc-ccC
Confidence            4778999999999999999999999999 3388866 8888 9999999     5 68899999999998  6666 778


Q ss_pred             cCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHh-cCC-CcccCCCCcchHHHHHH
Q 036069           79 NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS-KTT-AHLDGHDWSTLLKDLIN  156 (174)
Q Consensus        79 ~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~-~~~-~~~~~~~g~t~l~~a~~  156 (174)
                      ..|.||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|++ .|+ .+.++..|.|||++|+.
T Consensus       181 ~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~  259 (276)
T 4hbd_A          181 QAGQTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALD  259 (276)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHH
Confidence            8899999999999999999999999999 59999999999999999999999999999 677 67799999999999999


Q ss_pred             cCccccccc
Q 036069          157 CNLFGKYYS  165 (174)
Q Consensus       157 ~~~~~~~~~  165 (174)
                      .|+.+++..
T Consensus       260 ~g~~~iv~~  268 (276)
T 4hbd_A          260 AGQSEIASM  268 (276)
T ss_dssp             HTCHHHHHH
T ss_pred             cCCHHHHHH
Confidence            999888743

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.97  E-value=7.6e-31  Score=174.28  Aligned_cols=148  Identities=17%  Similarity=0.188  Sum_probs=136.6

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHH
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMV   86 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~   86 (174)
                      ...+||+.|+..|+.+++++|++.+  .+++.. +..| ||||+|+.  |+.+++++|++.+  .+++ .+|..|.||||
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~Ll~~~--~~~~~~-~~~g~t~L~~A~~--~~~~~v~~Ll~~g--~~~~-~~~~~g~t~L~   75 (162)
T 1ihb_A            4 PWGNELASAAARGDLEQLTSLLQNN--VNVNAQ-NGFGRTALQVMKL--GNPEIARRLLLRG--ANPD-LKDRTGFAVIH   75 (162)
T ss_dssp             -CHHHHHHHHHHTCHHHHHHHTTSC--CCTTCC-CTTSCCHHHHCCS--SCHHHHHHHHHTT--CCTT-CCCTTSCCHHH
T ss_pred             hHhhHHHHHHHcCCHHHHHHHHhCC--CCcccc-CccCccHHHHHHc--CcHHHHHHHHHcC--CCCC-CCCCCCCCHHH
Confidence            4679999999999999999999998  888866 7888 99999766  9999999999998  8888 89999999999


Q ss_pred             HHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCCC--cccCCCCcchHHHHHHcCcccccc
Q 036069           87 HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTA--HLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~--~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      +|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++++.  +..+..|.|||++|+..|+.+++.
T Consensus        76 ~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~  154 (162)
T 1ihb_A           76 DAARAGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVS  154 (162)
T ss_dssp             HHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             HHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence            99999999999999999998 599999999999999999999999999999993  568899999999999999988764

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.97  E-value=4.7e-31  Score=178.25  Aligned_cols=150  Identities=10%  Similarity=0.094  Sum_probs=136.3

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHH
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACM   85 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l   85 (174)
                      .++.++|+.|+..|+.++++.|++.+ +.+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.|||
T Consensus         3 ~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t~L   76 (179)
T 3f6q_A            3 PEFMDDIFTQCREGNAVAVRLWLDNT-ENDLNQG-DDHGFSPLHWACR-EGRSAVVEMLIMRG--ARIN-VMNRGDDTPL   76 (179)
T ss_dssp             ----CCHHHHHHHTCHHHHHHHHHCT-TSCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTCCCHH
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHhcC-ccccccc-CCCCCCHHHHHHH-cCcHHHHHHHHHcC--CCCC-CcCCCCCCHH
Confidence            46788999999999999999999997 5778766 7888 99999999 99999999999999  8888 8999999999


Q ss_pred             HHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           86 VHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        86 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      |+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+ .+.++..|.||+++|+..++.+++
T Consensus        77 ~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~  154 (179)
T 3f6q_A           77 HLAASHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLR  154 (179)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHH
Confidence            999999999999999999999 59999999999999999999999999999999 777999999999999988876655

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.97  E-value=3.6e-31  Score=188.01  Aligned_cols=154  Identities=10%  Similarity=0.003  Sum_probs=138.0

Q ss_pred             ccchhhHHHHHHHHh---CCHHHHHHHHHcCCCccccccc----------cCCc-cHHHHHHhhCCCHHHHHHHHhccch
Q 036069            5 TDIDSVMQVTRYILK---NDWKDLEEYIMSKTSNTLTDKI----------TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQ   70 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~---g~~~~~~~ll~~~~~~~~~~~~----------~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~   70 (174)
                      .|.+|.||||.|+..   |+.++++.|++.+  ++++...          +..| ||||+|+. .|+.+++++|++.+  
T Consensus        39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g--~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~g--  113 (256)
T 2etb_A           39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQID--KDSGNPKPLVNAQCTDEFYQGHSALHIAIE-KRSLQCVKLLVENG--  113 (256)
T ss_dssp             BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHH--HHTTCSSCGGGCCCCSTTTTTCCHHHHHHH-TTCHHHHHHHHHTT--
T ss_pred             CCCCCCCHHHHHHHccccchHHHHHHHHhcC--CcccchhhhcccccccccccCCCHHHHHHH-cCCHHHHHHHHHcC--
Confidence            577899999999999   9999999999998  6655221          2557 99999999 99999999999999  


Q ss_pred             hhhhhhcccC-------------CchHHHHHHhcCCHHHHHHHHH---hCCCCCCCCCCCCccHHHHHHh--cCChH---
Q 036069           71 NFLQEWVSNE-------------GNACMVHAATGGKSKLIEILMR---YNPNLPNVRDKSKLLPIHKAAQ--LGHRD---  129 (174)
Q Consensus        71 ~~~~~~~d~~-------------g~~~l~~A~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~tpl~~a~~--~~~~~---  129 (174)
                      ++++ ..+..             |.||||+|+..|+.+++++|++   .|++ ++.+|..|+||||+|+.  .++.+   
T Consensus       114 a~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~  191 (256)
T 2etb_A          114 ADVH-LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSA  191 (256)
T ss_dssp             CCTT-CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHH
T ss_pred             CCCC-cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhH
Confidence            7777 77765             9999999999999999999999   8998 59999999999999999  78888   


Q ss_pred             ----HHHHHHhcCC-C-------cccCCCCcchHHHHHHcCccccccc
Q 036069          130 ----TVRYLLSKTT-A-------HLDGHDWSTLLKDLINCNLFGKYYS  165 (174)
Q Consensus       130 ----~~~~ll~~~~-~-------~~~~~~g~t~l~~a~~~~~~~~~~~  165 (174)
                          ++++|++.|+ .       +.++..|.||||+|+..|+.+++..
T Consensus       192 ~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~  239 (256)
T 2etb_A          192 LVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRH  239 (256)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             HHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHH
Confidence                9999999998 6       6789999999999999999887743

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.97  E-value=3.1e-31  Score=186.27  Aligned_cols=154  Identities=12%  Similarity=0.054  Sum_probs=138.5

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccc----hhhhhhhccc
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVH----QNFLQEWVSN   79 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~----~~~~~~~~d~   79 (174)
                      .+..|.||||.|+..|+.+++++|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+.    ...+. ..+.
T Consensus        41 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~-~~~~  115 (236)
T 1ikn_D           41 QNNLQQTPLHLAVITNQPEIAEALLGAG--CDPELR-DFRGNTPLHLACE-QGCLASVGVLTQSCTTPHLHSILK-ATNY  115 (236)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHCCCSCC--CCSCCC-CTTCCCHHHHHHH-HTCHHHHHHHHHSTTTTSSSCGGG-CCCT
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCc-CCCCCCHHHHHHH-cCCHHHHHHHHhcccchhHHHHhh-ccCC
Confidence            3556999999999999999999999999  888866 7788 99999999 999999999999871    12245 6788


Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCC-CCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHc
Q 036069           80 EGNACMVHAATGGKSKLIEILMRYNPNLPNVRDK-SKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINC  157 (174)
Q Consensus        80 ~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~  157 (174)
                      .|.||||+|+..|+.+++++|++.|++ ++.++. .|.||||+|+..|+.+++++|+++|+ .+..+..|.|||++|+..
T Consensus       116 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~  194 (236)
T 1ikn_D          116 NGHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGR  194 (236)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTS
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHcc
Confidence            899999999999999999999999999 588887 99999999999999999999999999 777899999999999999


Q ss_pred             Ccccccc
Q 036069          158 NLFGKYY  164 (174)
Q Consensus       158 ~~~~~~~  164 (174)
                      |+.+++.
T Consensus       195 ~~~~~~~  201 (236)
T 1ikn_D          195 PSTRIQQ  201 (236)
T ss_dssp             SCHHHHH
T ss_pred             CchHHHH
Confidence            9887763

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.97  E-value=1.4e-30  Score=182.22  Aligned_cols=152  Identities=12%  Similarity=0.075  Sum_probs=141.1

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+..|.||||.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.|
T Consensus        69 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~~~~Ll~~g--~~~~-~~~~~g~t  141 (231)
T 3aji_A           69 KDDAGWSPLHIAASAGXDEIVKALLVKG--AHVNAV-NQNGCTPLHYAAS-KNRHEIAVMLLEGG--ANPD-AKDHYDAT  141 (231)
T ss_dssp             CCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTSCC
T ss_pred             cCCCCCCHHHHHHHcCHHHHHHHHHHcC--CCCCCC-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-CcCCCCCc
Confidence            4567999999999999999999999999  888866 7788 99999999 99999999999998  7777 88999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGK  162 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~  162 (174)
                      |||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|+ .+.++..|.||+++|+..++.++
T Consensus       142 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i  220 (231)
T 3aji_A          142 AMHRAAAKGNLKMVHILLFYKAS-TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLIL  220 (231)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHH
Confidence            99999999999999999999998 59999999999999999999999999999999 77799999999999998887766


Q ss_pred             cc
Q 036069          163 YY  164 (174)
Q Consensus       163 ~~  164 (174)
                      +.
T Consensus       221 ~~  222 (231)
T 3aji_A          221 KR  222 (231)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.97  E-value=9e-31  Score=187.83  Aligned_cols=154  Identities=12%  Similarity=0.006  Sum_probs=137.0

Q ss_pred             cccchhhHHHHHHHHhCCHHHHHHHHHcCCCcc---ccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhccc
Q 036069            4 ITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNT---LTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSN   79 (174)
Q Consensus         4 ~~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~---~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~   79 (174)
                      ..|.+|.||||.|+..|+.+++++|++.+  .+   ++.. +..| ||||+|+. .|+.+++++|++.+  ++++ ..|.
T Consensus         4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~-~~~g~t~L~~A~~-~g~~~~v~~Ll~~g--a~~~-~~~~   76 (282)
T 1oy3_D            4 YVTEDGDTALHLAVIHQHEPFLDFLLGFS--AGHEYLDLQ-NDLGQTALHLAAI-LGEASTVEKLYAAG--AGVL-VAER   76 (282)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHHHH--TTSGGGGCC-CTTSCCHHHHHHH-HTCHHHHHHHHHTT--CCSS-CCCT
T ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHhcC--CCccccccc-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-CCCC
Confidence            35778999999999999999999999988  55   6655 7778 99999999 99999999999999  8888 8999


Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHhCCCC----------------------------------------------CCCCCC
Q 036069           80 EGNACMVHAATGGKSKLIEILMRYNPNL----------------------------------------------PNVRDK  113 (174)
Q Consensus        80 ~g~~~l~~A~~~~~~~~~~~Ll~~~~~~----------------------------------------------~~~~~~  113 (174)
                      .|.||||+|+..|+.+++++|++.++..                                              ++.++.
T Consensus        77 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (282)
T 1oy3_D           77 GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY  156 (282)
T ss_dssp             TSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCT
T ss_pred             CCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCC
Confidence            9999999999999999999999977541                                              356788


Q ss_pred             CCccHHHHHHhcCChHHHHHHHhcCC-CcccC-CCCcchHHHHHHcCcccccc
Q 036069          114 SKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDG-HDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       114 ~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~-~~g~t~l~~a~~~~~~~~~~  164 (174)
                      .|.||||+|+..|+.+++++|+++|+ .+..+ ..|.||||+|+..|+.+++.
T Consensus       157 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~  209 (282)
T 1oy3_D          157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLE  209 (282)
T ss_dssp             TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred             CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHH
Confidence            99999999999999999999999998 55555 45999999999999988763

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.97  E-value=4.6e-30  Score=179.11  Aligned_cols=157  Identities=14%  Similarity=0.127  Sum_probs=128.0

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+.+|.||||.|+..|+.+++++|++.+...+++...+..| ||||+|+. .|+.+++++|++.+...+++ ..+..|.|
T Consensus        32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~~~~Ll~~g~~~~~~-~~~~~g~t  109 (228)
T 2dzn_A           32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS-VGNLEVVKSLYDRPLKPDLN-KITNQGVT  109 (228)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH-HCCHHHHHHHHSSSSCCCTT-CCCTTCCC
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH-cCCHHHHHHHHhCCCCcccc-cCCcCCCC
Confidence            46678899999999999999999998872333433135667 99999999 89999999998876334556 77888899


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcC-C-CcccCCCCcchHHHHHHcCccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKT-T-AHLDGHDWSTLLKDLINCNLFG  161 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~-~-~~~~~~~g~t~l~~a~~~~~~~  161 (174)
                      |||+|+..++.+++++|++.|.+ ++.+|..|.||||+|+..|+.+++++|++.+ + .+.++..|.||||+|+..|+.+
T Consensus       110 ~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~  188 (228)
T 2dzn_A          110 CLHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGD  188 (228)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHHcCCHhHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHH
Confidence            99999999999999999998888 5888888999999999999999999999988 4 5557888999999999988877


Q ss_pred             ccc
Q 036069          162 KYY  164 (174)
Q Consensus       162 ~~~  164 (174)
                      ++.
T Consensus       189 ~v~  191 (228)
T 2dzn_A          189 AAV  191 (228)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            663

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.97  E-value=4.5e-30  Score=180.20  Aligned_cols=151  Identities=13%  Similarity=0.108  Sum_probs=85.7

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+..|.||||.|+..|+.+++++|++.|  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..+..|.|
T Consensus         7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t   79 (237)
T 3b7b_A            7 EHQNKRSPLHAAAEAGHVDICHMLVQAG--ANIDTC-SEDQRTPLMEAAE-NNHLEAVKYLIKAG--ALVD-PKDAEGST   79 (237)
T ss_dssp             SSCCSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCC-CTTCCCHHHHHHH-TTCHHHHHHHHTTT--CCCC-CCCTTSCC
T ss_pred             ccCCCCCHHHHHHHcCcHHHHHHHHHcC--CCcCcc-CCCCCCHHHHHHH-hCCHHHHHHHHhCC--CCCC-CCCCCCCc
Confidence            4455666666666666666666666666  566544 5555 66666666 66666666666665  4444 45555555


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGK  162 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~  162 (174)
                      |||+|+..|+.+++++|++.+...++..+..|.||||+|+..|+.+++++|++.|+ .+..+..|.||||.|+..|+.++
T Consensus        80 ~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~  159 (237)
T 3b7b_A           80 CLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDI  159 (237)
T ss_dssp             HHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHH
T ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHH
Confidence            55555555555555555555422234455555555555555555555555555554 33444455555555555554443

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.97  E-value=3.5e-30  Score=185.89  Aligned_cols=150  Identities=13%  Similarity=0.083  Sum_probs=110.0

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      ++.+|.||||.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.|
T Consensus        55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~g~~~~v~~Ll~~g--a~~~-~~~~~g~t  127 (285)
T 3d9h_A           55 DAVSDWSPMHEAAIHGHQLSLRNLISQG--WAVNII-TADHVSPLHEACL-GGHLSCVKILLKHG--AQVN-GVTADWHT  127 (285)
T ss_dssp             SSCCSCCHHHHHHHTTCHHHHHHHHHTT--CCSCEE-CTTCCCHHHHHHH-TTCHHHHHHHHHTT--CCSS-CCCTTCCC
T ss_pred             CCccCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCc-CCCCCCHHHHHHH-CCcHHHHHHHHHCC--CCCC-CCCCCCCC
Confidence            4566888888888888888888888888  777755 7777 88888888 88888888888887  6666 67777777


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGK  162 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~  162 (174)
                      |||+|+..|+.+++++|++.++++ +. +..|.||||+|+..|+.+++++|++.++ .+..+..|.|||+.|+..|+.++
T Consensus       128 ~L~~A~~~~~~~~v~~Ll~~g~~~-~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~  205 (285)
T 3d9h_A          128 PLFNACVSGSWDCVNLLLQHGASV-QP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRAC  205 (285)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCS-SC-SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHH
T ss_pred             HHHHHHHcCHHHHHHHHHHCCCCC-CC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence            777777777777777777777663 43 2336677777777777777777766666 45566666677776666666555


Q ss_pred             c
Q 036069          163 Y  163 (174)
Q Consensus       163 ~  163 (174)
                      +
T Consensus       206 v  206 (285)
T 3d9h_A          206 V  206 (285)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.97  E-value=7.5e-30  Score=184.73  Aligned_cols=152  Identities=15%  Similarity=0.079  Sum_probs=134.9

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+.++.+||+.|+..|+.+++++|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+  ++++ ..|..|.|
T Consensus        36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~g~~~~v~~Ll~~g--a~~~-~~~~~g~t  108 (299)
T 1s70_B           36 VKFDDGAVFLAACSSGDTEEVLRLLERG--ADINYA-NVDGLTALHQACI-DDNVDMVKFLVENG--ANIN-QPDNEGWI  108 (299)
T ss_dssp             CEECHHHHHHHHHHHTCHHHHHHHHHHC--CCTTCB-CTTCCBHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTSCC
T ss_pred             cccCCccHHHHHHHcCCHHHHHHHHHcC--CCCccc-CCCCCCHHHHHHH-cCCHHHHHHHHHCC--CCCC-CCCCCCCc
Confidence            3567899999999999999999999999  888866 7888 99999999 99999999999998  8888 88999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCC---------------------------------------------------
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRD---------------------------------------------------  112 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~---------------------------------------------------  112 (174)
                      |||+|+..|+.+++++|++.|+++ +..+                                                   
T Consensus       109 pL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~  187 (299)
T 1s70_B          109 PLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNS  187 (299)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhc
Confidence            999999999999999999998873 5443                                                   


Q ss_pred             ---------CCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          113 ---------KSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       113 ---------~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                               ..|.||||+|+..|+.+++++|++.|+ .+..+..|.||||+|+..|+.+++.
T Consensus       188 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~  249 (299)
T 1s70_B          188 GHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACR  249 (299)
T ss_dssp             TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred             cCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHH
Confidence                     357788899999999999999999988 7778899999999999999887763

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.97  E-value=6.7e-30  Score=179.54  Aligned_cols=151  Identities=13%  Similarity=0.055  Sum_probs=86.5

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccch--hhhhhhcccCCch
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQ--NFLQEWVSNEGNA   83 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~--~~~~~~~d~~g~~   83 (174)
                      ..|.||||.|+..|+.+++++|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+.+  .+++ ..|..|.|
T Consensus        44 ~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~l~~A~~-~~~~~~~~~Ll~~~~~~~~~~~-~~~~~g~t  118 (241)
T 1k1a_A           44 NLRQTPLHLAVITTLPSVVRLLVTAG--ASPMAL-DRHGQTAAHLACE-HRSPTCLRALLDSAAPGTLDLE-ARNYDGLT  118 (241)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHHSCTTSCCTT-CCCTTSCC
T ss_pred             ccCCCHHHHHHHcCCHHHHHHHHHcC--CCcccc-CCCCCCHHHHHHH-cCCHHHHHHHHHcCCCcccccc-ccCcCCCc
Confidence            34555566655555555555555555  555543 4444 55555555 5555555555555400  0333 44555666


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCC-CCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRD-KSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFG  161 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~  161 (174)
                      |||+|+..++.+++++|++.+.+ ++..+ ..|.||||+|+..|+.+++++|++.|+ .+..+..|.||||.|+..|+.+
T Consensus       119 ~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~  197 (241)
T 1k1a_A          119 ALHVAVNTECQETVQLLLERGAD-IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLP  197 (241)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence            66666666666666666666655 35444 556666666666666666666666665 4445566666666666666655


Q ss_pred             cc
Q 036069          162 KY  163 (174)
Q Consensus       162 ~~  163 (174)
                      ++
T Consensus       198 ~v  199 (241)
T 1k1a_A          198 LV  199 (241)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.97  E-value=2.7e-30  Score=181.33  Aligned_cols=151  Identities=17%  Similarity=0.132  Sum_probs=93.8

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      +.+|.||||.|+..|+.+++++|++.+  ++++.. +..| ||||+|+. .|+.+++++|++.+ +.+++ ..+..|.||
T Consensus        41 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~~~~Ll~~~-~~~~~-~~~~~g~t~  114 (237)
T 3b7b_A           41 SEDQRTPLMEAAENNHLEAVKYLIKAG--ALVDPK-DAEGSTCLHLAAK-KGHYEVVQYLLSNG-QMDVN-CQDDGGWTP  114 (237)
T ss_dssp             CTTCCCHHHHHHHTTCHHHHHHHHTTT--CCCCCC-CTTSCCHHHHHHH-TTCHHHHHHHHTTT-CCCTT-CCCTTSCCH
T ss_pred             CCCCCCHHHHHHHhCCHHHHHHHHhCC--CCCCCC-CCCCCcHHHHHHH-cCCHHHHHHHHhCC-CCCcc-cCCCCCCCH
Confidence            445666666666666666666666666  555544 5555 66666666 66666666666654 23344 555566666


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ||+|+..++.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|++.|+ .+..+..|.||||.|+..|+.+++
T Consensus       115 L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v  193 (237)
T 3b7b_A          115 MIWATEYKHVDLVKLLLSKGSD-INIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCV  193 (237)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHH
Confidence            6666666666666666666665 35566666666666666666666666666665 444556666666666666655544

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.97  E-value=2.6e-30  Score=186.60  Aligned_cols=149  Identities=12%  Similarity=0.032  Sum_probs=106.2

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .|.+|.||||.|+..|+.+++++|++.|  ++++..   .| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.|
T Consensus        27 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~---~g~t~L~~A~~-~g~~~~v~~Ll~~g--a~~~-~~d~~g~t   97 (285)
T 3kea_A           27 ADVHGHSASYYAIADNNVRLVCTLLNAG--ALKNLL---ENEFPLHQAAT-LEDTKIVKILLFSG--LDDS-QFDDKGNT   97 (285)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHTT--GGGSCC---TTCCHHHHHTT-SSSCHHHHHHHHTT--CCTT-CCCTTSCC
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHhCC--CCCCCC---CCCCHHHHHHH-cCCHHHHHHHHHCC--CCCC-CcCCCCCc
Confidence            3556777777777777777777777777  666644   25 77777777 77777777777777  6666 67777777


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCC-ccHHHHHHhcCChHHHHHHHhcCCCcccCCCCcchHHHHHHcCcccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSK-LLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGK  162 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~-~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~g~t~l~~a~~~~~~~~  162 (174)
                      |||+|+..|+.+++++|++.|++ ++.++..| .||||+|+..|+.+++++|+++++.......|.||||.|+..|+.++
T Consensus        98 ~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~  176 (285)
T 3kea_A           98 ALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDM  176 (285)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHcCCHHHHHHHHhcCCC-CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHH
Confidence            77777777777777777777777 46677777 57777777777777777777776633222366777777777776665


Q ss_pred             c
Q 036069          163 Y  163 (174)
Q Consensus       163 ~  163 (174)
                      +
T Consensus       177 v  177 (285)
T 3kea_A          177 M  177 (285)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.97  E-value=1.8e-29  Score=177.38  Aligned_cols=152  Identities=14%  Similarity=0.119  Sum_probs=137.2

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHH----cCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhccc
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIM----SKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSN   79 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~----~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~   79 (174)
                      .|.+|.||||.|+..|+.+++++|++    .+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|.
T Consensus         5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~   77 (241)
T 1k1a_A            5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGG--RELDIY-NNLRQTPLHLAVI-TTLPSVVRLLVTAG--ASPM-ALDR   77 (241)
T ss_dssp             --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTT--CCSCCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCT
T ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcC--CCCCcc-cccCCCHHHHHHH-cCCHHHHHHHHHcC--CCcc-ccCC
Confidence            57789999999999999999999997    55  788866 7888 99999999 99999999999998  7787 8899


Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHhCC----CCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccC-CCCcchHHH
Q 036069           80 EGNACMVHAATGGKSKLIEILMRYNP----NLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDG-HDWSTLLKD  153 (174)
Q Consensus        80 ~g~~~l~~A~~~~~~~~~~~Ll~~~~----~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~-~~g~t~l~~  153 (174)
                      .|.||||+|+..++.+++++|++.+.    . ++..+..|.||||+|+..|+.+++++|++.|+ ....+ ..|.||||.
T Consensus        78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~  156 (241)
T 1k1a_A           78 HGQTAAHLACEHRSPTCLRALLDSAAPGTLD-LEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIH  156 (241)
T ss_dssp             TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-ccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHH
Confidence            99999999999999999999999987    5 47889999999999999999999999999998 55555 789999999


Q ss_pred             HHHcCcccccc
Q 036069          154 LINCNLFGKYY  164 (174)
Q Consensus       154 a~~~~~~~~~~  164 (174)
                      |+..|+.+++.
T Consensus       157 A~~~~~~~~v~  167 (241)
T 1k1a_A          157 AVENNSLSMVQ  167 (241)
T ss_dssp             HHHTTCHHHHH
T ss_pred             HHHcCCHHHHH
Confidence            99999988764

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.97  E-value=1.3e-30  Score=185.39  Aligned_cols=152  Identities=11%  Similarity=0.059  Sum_probs=133.5

Q ss_pred             cchhhHHHHHHH---HhCCHHHHHHHHHcCCCccccc----------cccCCc-cHHHHHHhhCCCHHHHHHHHhccchh
Q 036069            6 DIDSVMQVTRYI---LKNDWKDLEEYIMSKTSNTLTD----------KITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQN   71 (174)
Q Consensus         6 ~~~~~~~L~~A~---~~g~~~~~~~ll~~~~~~~~~~----------~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~   71 (174)
                      +.+|.||||.|+   ..|+.++++.|++.+  ++...          ..+..| ||||+|+. .|+.+++++|++.+  +
T Consensus        43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g--~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~g--a  117 (260)
T 3jxi_A           43 PSTGKTCLPKALLNLSAGRNDTIPILLDIA--EKTGNMREFINSPFRDVYYRGQTALHIAIE-RRCKHYVELLVEKG--A  117 (260)
T ss_dssp             TTTCCCHHHHHHTSCBTTBCTHHHHHHHHH--HHTTCHHHHHTCCBCCSSEESBCHHHHHHH-TTCHHHHHHHHHTT--C
T ss_pred             cCCCCcHHHHHHHHhhcCCHHHHHHHHHhc--ccccchHhhhcccccccccCCCCHHHHHHH-cCCHHHHHHHHhCC--C
Confidence            356999999999   779999999999987  44211          113367 99999999 99999999999999  7


Q ss_pred             hhhhhcc--------------cCCchHHHHHHhcCCHHHHHHHHH---hCCCCCCCCCCCCccHHHHHHhcCC-------
Q 036069           72 FLQEWVS--------------NEGNACMVHAATGGKSKLIEILMR---YNPNLPNVRDKSKLLPIHKAAQLGH-------  127 (174)
Q Consensus        72 ~~~~~~d--------------~~g~~~l~~A~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~tpl~~a~~~~~-------  127 (174)
                      +++ ..+              ..|.||||+|+..|+.+++++|++   .|++ ++.+|..|+||||+|+..++       
T Consensus       118 ~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~  195 (260)
T 3jxi_A          118 DVH-AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTK  195 (260)
T ss_dssp             CTT-CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHH
T ss_pred             CcC-ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHH
Confidence            777 777              579999999999999999999999   8888 59999999999999998887       


Q ss_pred             --hHHHHHHHhcCC-C-------cccCCCCcchHHHHHHcCcccccc
Q 036069          128 --RDTVRYLLSKTT-A-------HLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       128 --~~~~~~ll~~~~-~-------~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                        .+++++|+++|+ .       +..+..|.||||+|+..|+.+++.
T Consensus       196 ~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~  242 (260)
T 3jxi_A          196 FVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ  242 (260)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             HHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence              799999999998 5       468999999999999999988874

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.97  E-value=3.4e-30  Score=184.66  Aligned_cols=153  Identities=11%  Similarity=0.062  Sum_probs=135.6

Q ss_pred             ccchhhHHHHHHHHh---CCHHHHHHHHHcCCCccc-------ccc---ccCCc-cHHHHHHhhCCCHHHHHHHHhccch
Q 036069            5 TDIDSVMQVTRYILK---NDWKDLEEYIMSKTSNTL-------TDK---ITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQ   70 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~---g~~~~~~~ll~~~~~~~~-------~~~---~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~   70 (174)
                      .+.+|.||||.|+..   |+.+++++|++.+  +++       +..   .+..| ||||+|+. .|+.+++++|++.+  
T Consensus        50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~g--a~~~~~~~~i~~~~~~~d~~g~tpL~~A~~-~g~~~~v~~Ll~~g--  124 (273)
T 2pnn_A           50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVA--RKTDSLKQFVNASYTDSYYKGQTALHIAIE-RRNMTLVTLLVENG--  124 (273)
T ss_dssp             CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHH--HHTTCHHHHHTCCCCSTTTTTCCHHHHHHH-TTCHHHHHHHHHTT--
T ss_pred             cCcCCCCHHHHHHHHHhcCChHHHHHHHHhh--ccccchhHHhhcccccccCCCCCHHHHHHH-cCCHHHHHHHHHCC--
Confidence            467899999999987   9999999999997  542       221   24467 99999999 99999999999999  


Q ss_pred             hhhhhhccc--------------CCchHHHHHHhcCCHHHHHHHHH---hCCCCCCCCCCCCccHHHHHHhcCC------
Q 036069           71 NFLQEWVSN--------------EGNACMVHAATGGKSKLIEILMR---YNPNLPNVRDKSKLLPIHKAAQLGH------  127 (174)
Q Consensus        71 ~~~~~~~d~--------------~g~~~l~~A~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~tpl~~a~~~~~------  127 (174)
                      ++++ ..+.              .|.||||+|+..|+.+++++|++   .|++ ++.+|..|+||||+|+..|+      
T Consensus       125 a~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~  202 (273)
T 2pnn_A          125 ADVQ-AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNT  202 (273)
T ss_dssp             CCTT-CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHH
T ss_pred             CCcC-ccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHH
Confidence            7777 7776              79999999999999999999999   8888 59999999999999999998      


Q ss_pred             ---hHHHHHHHhcCC-Cc-------ccCCCCcchHHHHHHcCcccccc
Q 036069          128 ---RDTVRYLLSKTT-AH-------LDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       128 ---~~~~~~ll~~~~-~~-------~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                         .+++++|++.|+ .+       .++..|.|||++|+..|+.+++.
T Consensus       203 ~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~  250 (273)
T 2pnn_A          203 KFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLA  250 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             HHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHH
Confidence               799999999988 43       48899999999999999988774

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.97  E-value=9.2e-30  Score=189.17  Aligned_cols=118  Identities=9%  Similarity=0.027  Sum_probs=93.6

Q ss_pred             cCCc-cHHHHHHhhCC--CHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCC----CCCCCCC
Q 036069           42 TGGL-SIFDLIVNSDA--PPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNL----PNVRDKS  114 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g--~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~----~~~~~~~  114 (174)
                      +..| ||||+|+. .|  +.+++++|++.+  .+++ ..|..|.||||+|+..|+.+++++|++.+++.    ++.+|..
T Consensus       135 ~~~g~t~L~~A~~-~g~~~~~~v~~Ll~~g--a~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~  210 (364)
T 3ljn_A          135 HCKGQTALHWCVG-LGPEYLEMIKILVQLG--ASPT-AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQ  210 (364)
T ss_dssp             EESCCCHHHHHHH-SCGGGHHHHHHHHHHT--CCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTT
T ss_pred             CCCCCCHHHHHHH-cCCchHHHHHHHHHcC--CCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCC
Confidence            4456 88888888 78  788888888877  7677 77888888888888888888888888877661    2777788


Q ss_pred             CccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069          115 KLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       115 ~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      |.||||+|+..|+.+++++|+++|+ .+..+..|.|||++|+..|+.+++
T Consensus       211 g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v  260 (364)
T 3ljn_A          211 GNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLT  260 (364)
T ss_dssp             CCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHH
T ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHH
Confidence            8888888888888888888888887 666788888888888888877766

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.97  E-value=2.6e-29  Score=175.23  Aligned_cols=151  Identities=14%  Similarity=0.089  Sum_probs=133.4

Q ss_pred             hhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhh-cccCCchHHH
Q 036069            9 SVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEW-VSNEGNACMV   86 (174)
Q Consensus         9 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~-~d~~g~~~l~   86 (174)
                      |.||||.|+..|+.++++.|++.+  .......+..| ||||+|+. .|+.+++++|++.+...++. . .+..|.||||
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~~~~~~~~-~~~~~~g~t~L~   77 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSK--PSLLLQKDQDGRIPLHWSVS-FQAHEITSFLLSKMENVNLD-DYPDDSGWTPFH   77 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHC--GGGTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHTCTTCCGG-GCCCTTSCCHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcC--ccccccCCCCCCCHHHHHHH-cCCHHHHHHHHhcccccccc-ccCCCCCCCHHH
Confidence            679999999999999999999999  55544447888 99999999 99999999999987222333 3 7788999999


Q ss_pred             HHHhcCCHHHHHHHHHhC--CCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           87 HAATGGKSKLIEILMRYN--PNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~--~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      +|+..|+.+++++|++.+  .+ ++..+..|.||||+|+..|+.+++++|+++|+ .+.++..|.||||.|+..|+.+++
T Consensus        78 ~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v  156 (228)
T 2dzn_A           78 IACSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLI  156 (228)
T ss_dssp             HHHHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             HHHHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence            999999999999999998  66 58889999999999999999999999999998 777899999999999999998876


Q ss_pred             c
Q 036069          164 Y  164 (174)
Q Consensus       164 ~  164 (174)
                      .
T Consensus       157 ~  157 (228)
T 2dzn_A          157 E  157 (228)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.97  E-value=2.7e-29  Score=172.17  Aligned_cols=147  Identities=13%  Similarity=0.133  Sum_probs=133.9

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHH
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACM   85 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l   85 (174)
                      ..+.+||+.|+..|+.+.++.++..+ +.+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.|||
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t~l   76 (201)
T 3hra_A            3 TYEVGALLEAANQRDTKKVKEILQDT-TYQVDEV-DTEGNTPLNIAVH-NNDIEIAKALIDRG--ADIN-LQNSISDSPY   76 (201)
T ss_dssp             CCCTTHHHHHHHTTCHHHHHHHHTCT-TCCTTCC-CTTSCCHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCTTSCCHH
T ss_pred             cccccHHHHHHHhccHHHHHHHHHcC-CCCCCCC-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-CCCCCCCCHH
Confidence            45889999999999999999999998 5588866 7888 99999999 99999999999999  8888 8999999999


Q ss_pred             HHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcC-C-CcccCCCCcchHHHHHHcCc
Q 036069           86 VHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKT-T-AHLDGHDWSTLLKDLINCNL  159 (174)
Q Consensus        86 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~-~-~~~~~~~g~t~l~~a~~~~~  159 (174)
                      |+|+..|+.+++++|++.+...++..+..|.||||+|+..|+.+++++|++.+ . .+.++..|.||||.|+..+.
T Consensus        77 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~  152 (201)
T 3hra_A           77 LYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLRE  152 (201)
T ss_dssp             HHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSC
T ss_pred             HHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhcc
Confidence            99999999999999996554336889999999999999999999999999999 4 56688999999999998876

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.97  E-value=3.3e-29  Score=184.51  Aligned_cols=152  Identities=13%  Similarity=0.035  Sum_probs=114.3

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      |..|.||||.|+..|+.+++++|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.||
T Consensus        55 d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~g~~~iv~~Ll~~g--~~~~-~~~~~g~t~  127 (351)
T 3utm_A           55 DGRKSTPLHLAAGYNRVRIVQLLLQHG--ADVHAK-DKGGLVPLHNACS-YGHYEVTELLLKHG--ACVN-AMDLWQFTP  127 (351)
T ss_dssp             STTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTCCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTCCCH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCcc-CCCCCcHHHHHHH-CCCHHHHHHHHHCC--CCCC-CCCCCCCCH
Confidence            456777888888888888888888877  777755 6666 78888887 78888888887777  6666 666777777


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCC---------------------------------------------------------
Q 036069           85 MVHAATGGKSKLIEILMRYNPNL---------------------------------------------------------  107 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~---------------------------------------------------------  107 (174)
                      ||+|+..|+.+++++|++.|++.                                                         
T Consensus       128 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  207 (351)
T 3utm_A          128 LHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQ  207 (351)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCC
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccC
Confidence            77777777766666666654431                                                         


Q ss_pred             --------------------------------CCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHH
Q 036069          108 --------------------------------PNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDL  154 (174)
Q Consensus       108 --------------------------------~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a  154 (174)
                                                      ++.+|..|.||||+|+..|+.+++++|+++|+ .+.++..|.||||+|
T Consensus       208 ~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A  287 (351)
T 3utm_A          208 PQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRA  287 (351)
T ss_dssp             TTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence                                            35567778888888888888888888888887 666788888888888


Q ss_pred             HHcCcccccc
Q 036069          155 INCNLFGKYY  164 (174)
Q Consensus       155 ~~~~~~~~~~  164 (174)
                      +..|+.+++.
T Consensus       288 ~~~~~~~~v~  297 (351)
T 3utm_A          288 ALAGHLQTCR  297 (351)
T ss_dssp             HHHTCHHHHH
T ss_pred             HHcCcHHHHH
Confidence            8888877663

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.97  E-value=2.2e-29  Score=181.72  Aligned_cols=151  Identities=13%  Similarity=0.061  Sum_probs=130.7

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+.+|.||||.|+..|+.+++++|++.+  ++++.. +..| ||||+|+. .|+.+++++|++.+  .+++ . +..|.|
T Consensus        88 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~-~~~g~t  159 (285)
T 3d9h_A           88 ITADHVSPLHEACLGGHLSCVKILLKHG--AQVNGV-TADWHTPLFNACV-SGSWDCVNLLLQHG--ASVQ-P-ESDLAS  159 (285)
T ss_dssp             ECTTCCCHHHHHHHTTCHHHHHHHHHTT--CCSSCC-CTTCCCHHHHHHH-HTCHHHHHHHHHTT--CCSS-C-SCTTSC
T ss_pred             cCCCCCCHHHHHHHCCcHHHHHHHHHCC--CCCCCC-CCCCCCHHHHHHH-cCHHHHHHHHHHCC--CCCC-C-CCCCCC
Confidence            4667999999999999999999999998  888866 7778 99999999 99999999999988  6555 3 445889


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCCCcccCCCCcchHHHHHHcCccccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      |||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.|+..-.+..|.||||+|+..|+.+++
T Consensus       160 ~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v  238 (285)
T 3d9h_A          160 PIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELA  238 (285)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence            99999999999999999999988 58889999999999999999999999999988332578899999999999987776


Q ss_pred             c
Q 036069          164 Y  164 (174)
Q Consensus       164 ~  164 (174)
                      .
T Consensus       239 ~  239 (285)
T 3d9h_A          239 C  239 (285)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.97  E-value=4.1e-29  Score=179.08  Aligned_cols=152  Identities=13%  Similarity=0.132  Sum_probs=139.5

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      +.+|.+||+.|+..|+.+++++|++.+  .+++...+..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.||
T Consensus         2 ~~~g~~~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~g--~~~~-~~~~~g~t~   75 (285)
T 1wdy_A            2 AVEDNHLLIKAVQNEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQ-MSREDIVELLLRHG--ADPV-LRKKNGATP   75 (285)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTTCCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTCCCH
T ss_pred             CcccchHHHHHHHcCCHHHHHHHHHcC--CCcccccCCCCCcHHHHHHH-cCCHHHHHHHHHcC--CCCc-ccCCCCCCH
Confidence            457999999999999999999999999  78886656677 99999999 99999999999998  7787 889999999


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-Cccc----------CCCCcchHHH
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLD----------GHDWSTLLKD  153 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~----------~~~g~t~l~~  153 (174)
                      ||+|+..|+.+++++|++.|.+ ++.++..|.||||+|+..|+.+++++|++.++ .+..          +..|.|||+.
T Consensus        76 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~  154 (285)
T 1wdy_A           76 FLLAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMD  154 (285)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHcCCC-CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHH
Confidence            9999999999999999999999 59999999999999999999999999999988 5544          7789999999


Q ss_pred             HHHcCcccccc
Q 036069          154 LINCNLFGKYY  164 (174)
Q Consensus       154 a~~~~~~~~~~  164 (174)
                      |+..|+.+++.
T Consensus       155 A~~~~~~~~v~  165 (285)
T 1wdy_A          155 AAEKGHVEVLK  165 (285)
T ss_dssp             HHHHTCHHHHH
T ss_pred             HHHcCCHHHHH
Confidence            99999988764

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.96  E-value=6.3e-30  Score=183.26  Aligned_cols=151  Identities=15%  Similarity=0.071  Sum_probs=119.0

Q ss_pred             cchhhHHHHHHHHhCCHH-HHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            6 DIDSVMQVTRYILKNDWK-DLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~-~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      +..+.+||+.|+..+..+ +++.|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+  +++. ..+..|.|
T Consensus        49 ~~~~~t~L~~a~~~~~~~~~v~~Ll~~G--advn~~-d~~G~TpLh~A~~-~g~~~~v~~Ll~~~--a~~~-~~~~~g~t  121 (269)
T 4b93_B           49 DPEFCHPLCQCPKCAPAQKRLAKVPASG--LGVNVT-SQDGSSPLHVAAL-HGRADLIPLLLKHG--ANAG-ARNADQAV  121 (269)
T ss_dssp             --------------------------CC--CCTTCC-CTTSCCHHHHHHH-TTCTTHHHHHHHTT--CCTT-CCCTTCCC
T ss_pred             CccCCCHHHHHHHhCCHHHHHHHHHHCC--CCCCCc-CCCCCCHHHHHHH-cCcHHHHHHHHhcC--CCcC-ccCCCCCC
Confidence            456889999999988765 788999999  999977 8888 99999999 99999999999999  8888 89999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGK  162 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~  162 (174)
                      |+|+|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+ .+..+..|.||||+|+..|+.++
T Consensus       122 ~l~~a~~~~~~~~~~~Ll~~g~~-~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~  200 (269)
T 4b93_B          122 PLHLACQQGHFQVVKCLLDSNAK-PNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFV  200 (269)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred             ccccccccChHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHH
Confidence            99999999999999999999999 59999999999999999999999999999999 77789999999999999999887


Q ss_pred             cc
Q 036069          163 YY  164 (174)
Q Consensus       163 ~~  164 (174)
                      +-
T Consensus       201 v~  202 (269)
T 4b93_B          201 VE  202 (269)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.96  E-value=1.6e-29  Score=191.97  Aligned_cols=150  Identities=15%  Similarity=0.131  Sum_probs=114.8

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      +.+|.||||.|+..|+.+++++|++.|  ++++.. +..+ ||||+|+. .|+.+++++|++.+  .+++ .+|..|.||
T Consensus        11 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~~-~~~~~t~L~~A~~-~g~~~~v~~Ll~~g--~~~~-~~~~~g~t~   83 (437)
T 1n11_A           11 GESGLTPLHVASFMGHLPIVKNLLQRG--ASPNVS-NVKVETPLHMAAR-AGHTEVAKYLLQNK--AKVN-AKAKDDQTP   83 (437)
T ss_dssp             ----CCHHHHHHHHTCHHHHHHHHHTT--CCSCCS-SSCCCCHHHHHHH-HTCHHHHHHHHHHT--CCSS-CCCTTSCCH
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHcC--CCCCCC-CCCCCCHHHHHHH-cCCHHHHHHHHhCC--CCCC-CCCCCCCCH
Confidence            556888888888888888888888887  777755 6667 88888888 88888888888887  6677 777888888


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|++.++ ....+..|.|||+.|+..|+.+++
T Consensus        84 L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v  162 (437)
T 1n11_A           84 LHCAARIGHTNMVKLLLENNAN-PNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVA  162 (437)
T ss_dssp             HHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             HHHHHHCCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHH
Confidence            8888888888888888888877 47777778888888888888777777777776 445666777777777777766654

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.96  E-value=2.3e-29  Score=191.02  Aligned_cols=150  Identities=17%  Similarity=0.166  Sum_probs=120.0

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      +..|.||||.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.||
T Consensus       242 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~-~~~g~t~L~~A~~-~~~~~~~~~Ll~~g--~~~~-~~~~~g~t~  314 (437)
T 1n11_A          242 SVQGVTPLHLAAQEGHAEMVALLLSKQ--ANGNLG-NKSGLTPLHLVAQ-EGHVPVADVLIKHG--VMVD-ATTRMGYTP  314 (437)
T ss_dssp             CTTCCCHHHHHHHTTCHHHHHHHHTTT--CCTTCC-CTTCCCHHHHHHH-HTCHHHHHHHHHHT--CCTT-CCCSSCCCH
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHhcC--CCCCCC-CCCCCCHHHHHHH-cCCHHHHHHHHhCC--ccCC-CCCCCCCCH
Confidence            456777777777777777777777777  666655 6666 78888887 78888888888777  6677 778888888


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+ .+..+.+|.||+++|...|+.+++
T Consensus       315 L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~  393 (437)
T 1n11_A          315 LHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVT  393 (437)
T ss_dssp             HHHHHHSSCSHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHH
T ss_pred             HHHHHHcCcHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHH
Confidence            8888888888888888888888 48888888888888888888888888888888 667888888888888888876554

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.96  E-value=1.5e-29  Score=182.70  Aligned_cols=148  Identities=16%  Similarity=0.093  Sum_probs=136.3

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCC-chH
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEG-NAC   84 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g-~~~   84 (174)
                      .+|.||||.|+..|+.+++++|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+  ++++ ..|..| .||
T Consensus        60 ~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~-d~~g~t~L~~A~~-~g~~~~v~~Ll~~g--a~~~-~~~~~g~~t~  132 (285)
T 3kea_A           60 LENEFPLHQAATLEDTKIVKILLFSG--LDDSQF-DDKGNTALYYAVD-SGNMQTVKLFVKKN--WRLM-FYGKTGWKTS  132 (285)
T ss_dssp             CTTCCHHHHHTTSSSCHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHHC--GGGG-GCSSSGGGSH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCc-CCCCCcHHHHHHH-cCCHHHHHHHHhcC--CCCC-ccCCCCCCCH
Confidence            36899999999999999999999999  899866 7888 99999999 99999999999999  8888 899998 899


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCC-CCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcch-HHHHHHcCccc
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDK-SKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTL-LKDLINCNLFG  161 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~-l~~a~~~~~~~  161 (174)
                      ||+|+..|+.+++++|++.++..   .+. .|.||||+|+..|+.+++++|+++|+ .+.++..|.|| ||+|+..|+.+
T Consensus       133 L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~  209 (285)
T 3kea_A          133 FYHAVMLNDVSIVSYFLSEIPST---FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIE  209 (285)
T ss_dssp             HHHHHHTTCHHHHHHHHTTSCTT---CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHH
T ss_pred             HHHHHHcCCHHHHHHHHhCCCcc---ccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHH
Confidence            99999999999999999999874   233 79999999999999999999999999 77789999998 99999999988


Q ss_pred             ccc
Q 036069          162 KYY  164 (174)
Q Consensus       162 ~~~  164 (174)
                      ++.
T Consensus       210 ~v~  212 (285)
T 3kea_A          210 MLQ  212 (285)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            774

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.96  E-value=3.5e-29  Score=186.05  Aligned_cols=154  Identities=14%  Similarity=0.123  Sum_probs=121.2

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccc--------------
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVH--------------   69 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~--------------   69 (174)
                      .|.+|.||||.|+..|+.+++++|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+.              
T Consensus        16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~~-d~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A   91 (364)
T 3ljn_A           16 SDDENMEKIHVAARKGQTDEVRRLIETG--VSPTIQ-NRFGCTALHLACK-FGCVDTAKYLASVGEVHSLWHGQKPIHLA   91 (364)
T ss_dssp             CCHHHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCC-CTTCCCHHHHHHH-HCCHHHHHHHHHHCCCCCCBTTBCHHHHH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCcccc-CCCCCcHHHHHHH-cCCHHHHHHHHHCCCCccccCCCCHHHHH
Confidence            3556777788887777777777777777  777755 6666 77777777 777777777777650              


Q ss_pred             -------------------hhhhhhh-----------------cccCCchHHHHHHhcC--CHHHHHHHHHhCCCCCCCC
Q 036069           70 -------------------QNFLQEW-----------------VSNEGNACMVHAATGG--KSKLIEILMRYNPNLPNVR  111 (174)
Q Consensus        70 -------------------~~~~~~~-----------------~d~~g~~~l~~A~~~~--~~~~~~~Ll~~~~~~~~~~  111 (174)
                                         ...++ .                 .|..|.||||+|+..|  +.+++++|++.|++ ++.+
T Consensus        92 ~~~g~~~~v~~Ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~  169 (364)
T 3ljn_A           92 VMANKTDLVVALVEGAKERGQMPE-SLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PTAK  169 (364)
T ss_dssp             HHTTCHHHHHHHHHHHHHHTCCHH-HHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCC
T ss_pred             HHcCCHHHHHHHHHhccccCCCHH-HHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-Cccc
Confidence                               01111 2                 6777899999999999  89999999999988 5888


Q ss_pred             CCCCccHHHHHHhcCChHHHHHHHhcCCC------cccCCCCcchHHHHHHcCcccccc
Q 036069          112 DKSKLLPIHKAAQLGHRDTVRYLLSKTTA------HLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       112 ~~~~~tpl~~a~~~~~~~~~~~ll~~~~~------~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      |..|.||||+|+..|+.+++++|++.++.      +..+..|.||||+|+..|+.+++.
T Consensus       170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~  228 (364)
T 3ljn_A          170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAM  228 (364)
T ss_dssp             CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHH
Confidence            99999999999999999999999988763      237788999999999999888763

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.96  E-value=8.1e-30  Score=187.35  Aligned_cols=147  Identities=12%  Similarity=0.000  Sum_probs=130.0

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCC---HHHHHHHHhccchhhhhhhcccC
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAP---PMFLDKLVSKVHQNFLQEWVSNE   80 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~---~~~v~~Ll~~~~~~~~~~~~d~~   80 (174)
                      .|.+|.||||+|+..|+.+++++|++.|  ++++.. +..| ||||+|+. .|+   .++++.|++.+ .++++ .+|..
T Consensus       127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~G--ad~n~~-d~~g~TpLh~A~~-~g~~~~~~~~~~ll~~~-~~~~~-~~d~~  200 (327)
T 1sw6_A          127 VDEHGNTPLHWLTSIANLELVKHLVKHG--SNRLYG-DNMGESCLVKAVK-SVNNYDSGTFEALLDYL-YPCLI-LEDSM  200 (327)
T ss_dssp             CSTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTBC-CTTCCCHHHHHHH-SSHHHHTTCHHHHHHHH-GGGGG-EECTT
T ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCCCc-CCCCCCHHHHHHH-hcccccHHHHHHHHHhh-hcccc-CCCCC
Confidence            5778999999999999999999999999  999966 8888 99999999 998   67778887765 24567 89999


Q ss_pred             CchHHHHHHh----cCCHHHHHHHHHhCC---------------------------------------------CCCCCC
Q 036069           81 GNACMVHAAT----GGKSKLIEILMRYNP---------------------------------------------NLPNVR  111 (174)
Q Consensus        81 g~~~l~~A~~----~~~~~~~~~Ll~~~~---------------------------------------------~~~~~~  111 (174)
                      |.||||+|+.    .|+.+++++|++.+.                                             . ++.+
T Consensus       201 g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~-~n~~  279 (327)
T 1sw6_A          201 NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANM-LNAQ  279 (327)
T ss_dssp             CCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHT-TTCC
T ss_pred             CCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhC-CCCC
Confidence            9999999998    899999999987632                                             3 4788


Q ss_pred             CCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcC
Q 036069          112 DKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCN  158 (174)
Q Consensus       112 ~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~  158 (174)
                      |..|+||||+|+..|+.+++++|+++|+ .+.++..|.||||+|+..|
T Consensus       280 d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g  327 (327)
T 1sw6_A          280 DSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE  327 (327)
T ss_dssp             CTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence            9999999999999999999999999999 7789999999999998764

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.96  E-value=9.5e-31  Score=183.78  Aligned_cols=157  Identities=15%  Similarity=0.010  Sum_probs=133.8

Q ss_pred             cccccchhhHHHHHHHHhCCHHHHHHHHHcCCC---ccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhc
Q 036069            2 KIITDIDSVMQVTRYILKNDWKDLEEYIMSKTS---NTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWV   77 (174)
Q Consensus         2 ~~~~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~---~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~   77 (174)
                      |...|.+|.||||.|+..|+.++++.|++.+ +   .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+
T Consensus         1 k~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~   74 (236)
T 1ikn_D            1 KQQLTEDGDSFLHLAIIHEEKALTMEVIRQV-KGDLAFLNFQ-NNLQQTPLHLAVI-TNQPEIAEALLGAG--CDPE-LR   74 (236)
T ss_dssp             ------CCCCTTHHHHHTTCSSSSSCCCC------CCCCCCC-CTTCCCHHHHHHH-TTCHHHHHCCCSCC--CCSC-CC
T ss_pred             CCcCCCCCCchhHHHHHcCChhHHHHHHHHh-hccHHHhhcc-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-Cc
Confidence            3456888999999999999999999999887 2   257755 7778 99999999 99999999999998  8888 89


Q ss_pred             ccCCchHHHHHHhcCCHHHHHHHHHhCCCC-----CCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCC-CCcch
Q 036069           78 SNEGNACMVHAATGGKSKLIEILMRYNPNL-----PNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGH-DWSTL  150 (174)
Q Consensus        78 d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~-----~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~-~g~t~  150 (174)
                      |..|.||||+|+..|+.+++++|++.+...     .+..+..|.||||+|+..|+.+++++|+++|+ .+..+. .|.||
T Consensus        75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tp  154 (236)
T 1ikn_D           75 DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTA  154 (236)
T ss_dssp             CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCH
Confidence            999999999999999999999999988641     35678889999999999999999999999998 666766 99999


Q ss_pred             HHHHHHcCcccccc
Q 036069          151 LKDLINCNLFGKYY  164 (174)
Q Consensus       151 l~~a~~~~~~~~~~  164 (174)
                      ||+|+..|+.+++.
T Consensus       155 L~~A~~~~~~~~v~  168 (236)
T 1ikn_D          155 LHLAVDLQNPDLVS  168 (236)
T ss_dssp             HHHHHHTTCHHHHH
T ss_pred             HHHHHHcCCHHHHH
Confidence            99999999988763

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.96  E-value=5.7e-29  Score=176.67  Aligned_cols=147  Identities=16%  Similarity=0.057  Sum_probs=127.7

Q ss_pred             hhhHHHHHHHHhCCHH----HHHHHHHcCCCccccc---cccCCc-cHHHHHHhhC---CCHHHHHHHHhccchhhhhhh
Q 036069            8 DSVMQVTRYILKNDWK----DLEEYIMSKTSNTLTD---KITGGL-SIFDLIVNSD---APPMFLDKLVSKVHQNFLQEW   76 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~----~~~~ll~~~~~~~~~~---~~~~~~-t~L~~A~~~~---g~~~~v~~Ll~~~~~~~~~~~   76 (174)
                      .|.||||.|+..|+.+    ++++|++.+  .+++.   ..+..| ||||+|+. .   |+.+++++|++.+  .+++ .
T Consensus         1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g--~~i~~~~~~~d~~g~t~L~~A~~-~~~~g~~~~v~~Ll~~g--~~~~-~   74 (256)
T 2etb_A            1 FDRDRLFSVVSRGVPEELTGLLEYLRWNS--KYLTDSAYTEGSTGKTCLMKAVL-NLQDGVNACIMPLLQID--KDSG-N   74 (256)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHHHT--CCTTSGGGSBTTTTBCHHHHHHH-TCBTTBCTTHHHHHHHH--HHTT-C
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHcC--CCcccccccCCCCCCCHHHHHHH-ccccchHHHHHHHHhcC--Cccc-c
Confidence            3789999999999997    556677788  88886   237788 99999999 9   9999999999988  5443 2


Q ss_pred             -----------cccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCC-------------CccHHHHHHhcCChHHHH
Q 036069           77 -----------VSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKS-------------KLLPIHKAAQLGHRDTVR  132 (174)
Q Consensus        77 -----------~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-------------~~tpl~~a~~~~~~~~~~  132 (174)
                                 .|..|.||||+|+..|+.+++++|++.|++ ++.++..             |.||||+|+..|+.++++
T Consensus        75 ~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~  153 (256)
T 2etb_A           75 PKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVT  153 (256)
T ss_dssp             SSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHH
T ss_pred             hhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence                       236799999999999999999999999999 5888776             999999999999999999


Q ss_pred             HHHh---cCC-CcccCCCCcchHHHHHH--cCccc
Q 036069          133 YLLS---KTT-AHLDGHDWSTLLKDLIN--CNLFG  161 (174)
Q Consensus       133 ~ll~---~~~-~~~~~~~g~t~l~~a~~--~~~~~  161 (174)
                      +|++   .|+ .+.++..|.||||+|+.  .++.+
T Consensus       154 ~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~  188 (256)
T 2etb_A          154 YLLENPHQPASLEATDSLGNTVLHALVMIADNSPE  188 (256)
T ss_dssp             HHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHH
T ss_pred             HHHhccccCCCcCccCCCCCCHHHHHHHcccCCch
Confidence            9999   787 67789999999999998  56555

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.96  E-value=8.9e-30  Score=179.45  Aligned_cols=149  Identities=13%  Similarity=0.109  Sum_probs=104.5

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      +..|.||||.|+..|+.+.++.|+++|  ++++.  +..+ |+||+|+. .|+.+++++|++.+  .+++ .+|..|.||
T Consensus         2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g--~~~~~--~~~~~t~L~~A~~-~g~~~~v~~Ll~~g--~~~~-~~d~~g~t~   73 (239)
T 1ycs_B            2 EITGQVSLPPGKRTNLRKTGSERIAHG--MRVKF--NPLPLALLLDSSL-EGEFDLVQRIIYEV--DDPS-LPNDEGITA   73 (239)
T ss_dssp             ---------------------------------------CHHHHHHHHH-HTCHHHHHHHTSTT--SSCC-CCCTTSCCH
T ss_pred             CccccccCchhhhhhhHHHHHHHhccC--CCccc--CchhhHHHHHHHH-cCCHHHHHHHHHcC--CCCC-CcCCCCCCH
Confidence            457999999999999999999999999  88873  4667 99999999 99999999999998  7888 899999999


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCc-chHHHH--HHcCcc
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWS-TLLKDL--INCNLF  160 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~-t~l~~a--~~~~~~  160 (174)
                      ||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|+ .+..+..|. |||+.|  +..|+.
T Consensus        74 L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~  152 (239)
T 1ycs_B           74 LHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT  152 (239)
T ss_dssp             HHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCC
T ss_pred             HHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccH
Confidence            9999999999999999999999 59999999999999999999999999999999 666666665 999999  667777


Q ss_pred             ccc
Q 036069          161 GKY  163 (174)
Q Consensus       161 ~~~  163 (174)
                      +++
T Consensus       153 ~~~  155 (239)
T 1ycs_B          153 QCS  155 (239)
T ss_dssp             CHH
T ss_pred             HHH
Confidence            765

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.96  E-value=2.1e-29  Score=166.69  Aligned_cols=140  Identities=16%  Similarity=0.116  Sum_probs=116.6

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+..|.+|||.|+..|+.+++++|++.+  .+++.. +..| ||||+| . .|+.+++++|++.+  .+++ .+|..|.|
T Consensus         8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A-~-~~~~~~v~~Ll~~g--~~~~-~~d~~g~t   79 (156)
T 1bi7_B            8 SMEPSADWLATAAARGRVEEVRALLEAG--ANPNAP-NSYGRRPIQVM-M-MGSARVAELLLLHG--AEPN-CADPATLT   79 (156)
T ss_dssp             --CCSTTHHHHHHHHTCHHHHHHHHTTT--CCTTCC-CSSSCCTTTSS-C-TTCHHHHHHHHTTT--CCCC-CCCTTTCC
T ss_pred             CCccchHHHHHHHHcCCHHHHHHHHHcC--CCCCCC-CCCCCCHHHHH-H-cCCHHHHHHHHHcC--CCCC-CcCCCCCc
Confidence            3557999999999999999999999999  889866 7888 999997 6 89999999999999  8888 99999999


Q ss_pred             -HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHH
Q 036069           84 -CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKD  153 (174)
Q Consensus        84 -~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~  153 (174)
                       |||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+ .+.++..|.|+.+.
T Consensus        80 tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~  150 (156)
T 1bi7_B           80 RPVHDAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEG  150 (156)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred             HHHHHHHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCccccc
Confidence             99999999999999999999999 59999999999999999999999999999999 77788889888763

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.96  E-value=8.5e-29  Score=166.00  Aligned_cols=138  Identities=12%  Similarity=0.041  Sum_probs=122.4

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+..|.||||.|+..|+.+++++|++.+  ++++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.|
T Consensus        32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t  104 (172)
T 3v30_A           32 PDERGFTPLIWASAFGEIETVRFLLEWG--ADPHIL-AKERESALSLAST-GGYTDIVGLLLERD--VDIN-IYDWNGGT  104 (172)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHHT--CCTTCC-CTTCCCHHHHHHH-TTCHHHHHHHHTTT--CCTT-CCCTTSCC
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCchhh-cccCCCHHHHHHH-CCCHHHHHHHHHcC--CCCC-CCCCCCCC
Confidence            3567999999999999999999999999  888866 7788 99999999 99999999999998  8888 89999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcch
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTL  150 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~  150 (174)
                      |||+|+..|+.+++++|++.|++ ++.+|..|.||+++|+..|+.+++++|+++++ ....+..|.||
T Consensus       105 ~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p  171 (172)
T 3v30_A          105 PLLYAVRGNHVKCVEALLARGAD-LTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP  171 (172)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence            99999999999999999999999 59999999999999999999999999999988 44466666665

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.96  E-value=2e-28  Score=158.40  Aligned_cols=125  Identities=14%  Similarity=0.065  Sum_probs=116.0

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      ...+.+|||.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.||
T Consensus        11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~d~~g~t~   83 (136)
T 2jab_A           11 GSDLGKKLLEAARAGQDDEVRILMANG--ADVNAK-DEYGLTPLYLATA-HGHLEIVEVLLKNG--ADVN-AVDAIGFTP   83 (136)
T ss_dssp             -CHHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCTTCCCH
T ss_pred             cccccHHHHHHHHhCCHHHHHHHHHcC--CCCCCc-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-cCCCCCCCH
Confidence            456999999999999999999999999  888866 7888 99999999 99999999999998  8888 899999999


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcC
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKT  138 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~  138 (174)
                      ||+|+..|+.+++++|++.|++ ++.+|..|.||+++|+..|+.+++++|++.|
T Consensus        84 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           84 LHLAAFIGHLEIAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             HHHHHHcCCHHHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            9999999999999999999998 5999999999999999999999999999875

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.96  E-value=2.1e-28  Score=182.77  Aligned_cols=153  Identities=14%  Similarity=0.086  Sum_probs=100.4

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhcc-chhhhhhhcccC--
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKV-HQNFLQEWVSNE--   80 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~-~~~~~~~~~d~~--   80 (174)
                      .|.+|.||||.|+..|+.+++++|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+ ...+++ ..|..  
T Consensus       162 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~g--a~~~~~-~~~g~t~L~~A~~-~g~~~~v~~Ll~~~~~~~~~~-~~d~~g~  236 (373)
T 2fo1_E          162 MDCDENTPLMLAVLARRRRLVAYLMKAG--ADPTIY-NKSERSALHQAAA-NRDFGMMVYMLNSTKLKGDIE-ELDRNGM  236 (373)
T ss_dssp             CCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCSCCC-CTTCCCHHHHHHH-TTCHHHHHHHTTSHHHHHTTS-CCCTTSC
T ss_pred             CCCCCCCHHHHHHHcChHHHHHHHHHCC--CCCccc-CCCCCCHHHHHHH-CCCHHHHHHHHhcCccccChh-hcCCCCC
Confidence            3567999999999999999999999998  888866 7777 99999998 88888888888764 112233 33444  


Q ss_pred             ------------------------------------------CchHHHHHHhcCCHHHHHHHHHhC-CCCCCCCCCCCcc
Q 036069           81 ------------------------------------------GNACMVHAATGGKSKLIEILMRYN-PNLPNVRDKSKLL  117 (174)
Q Consensus        81 ------------------------------------------g~~~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~t  117 (174)
                                                                |.||||+|+..|+.+++++|++.+ .+ ++.+|..|.|
T Consensus       237 t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-~n~~d~~g~T  315 (373)
T 2fo1_E          237 TALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN-KDKQDEDGKT  315 (373)
T ss_dssp             CHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC-TTCCCTTCCC
T ss_pred             CHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC-ccCcCCCCCC
Confidence                                                      455555555555555555555544 33 3555555555


Q ss_pred             HHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069          118 PIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       118 pl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      |||+|+..|+.+++++|+++|+ .+..+..|.|||++|+..|+.+++
T Consensus       316 pL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv  362 (373)
T 2fo1_E          316 PIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIV  362 (373)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHH
Confidence            5555555555555555555555 444555555555555555555554

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.96  E-value=1.3e-28  Score=178.23  Aligned_cols=145  Identities=12%  Similarity=0.160  Sum_probs=129.7

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhh-------
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEW-------   76 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~-------   76 (174)
                      .+.+|.||||.|+..|+.+++++|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .       
T Consensus        69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~-~~~g~tpL~~A~~-~g~~~~v~~Ll~~g--~~~~-~~~~~g~t  141 (299)
T 1s70_B           69 ANVDGLTALHQACIDDNVDMVKFLVENG--ANINQP-DNEGWIPLHAAAS-CGYLDIAEYLISQG--AHVG-AVNSEGDT  141 (299)
T ss_dssp             BCTTCCBHHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCTTSCC
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCC-CCCCCcHHHHHHH-cCCHHHHHHHHhCC--CCCC-CcCCCCCC
Confidence            4567999999999999999999999999  899866 7788 99999999 99999999999987  3222 1       


Q ss_pred             -----------------------------------------------------cccCCchHHHHHHhcCCHHHHHHHHHh
Q 036069           77 -----------------------------------------------------VSNEGNACMVHAATGGKSKLIEILMRY  103 (174)
Q Consensus        77 -----------------------------------------------------~d~~g~~~l~~A~~~~~~~~~~~Ll~~  103 (174)
                                                                           .+..|.||||+|+..|+.+++++|++.
T Consensus       142 ~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~  221 (299)
T 1s70_B          142 PLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQA  221 (299)
T ss_dssp             HHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTT
T ss_pred             HHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHc
Confidence                                                                 224588999999999999999999999


Q ss_pred             CCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHc
Q 036069          104 NPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINC  157 (174)
Q Consensus       104 ~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~  157 (174)
                      |++ ++.+|..|.||||+|+..|+.+++++|+++|+ .+..+..|.|||++|+..
T Consensus       222 g~d-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~  275 (299)
T 1s70_B          222 RYD-VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED  275 (299)
T ss_dssp             TCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG
T ss_pred             CCC-CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH
Confidence            999 59999999999999999999999999999999 777999999999998653

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.96  E-value=9.4e-28  Score=171.97  Aligned_cols=24  Identities=8%  Similarity=0.018  Sum_probs=9.6

Q ss_pred             hhHHHHHHHHhCCHHHHHHHHHcC
Q 036069            9 SVMQVTRYILKNDWKDLEEYIMSK   32 (174)
Q Consensus         9 ~~~~L~~A~~~g~~~~~~~ll~~~   32 (174)
                      |.||||.|+..|+.+++++|++.+
T Consensus        72 g~t~L~~A~~~~~~~~v~~Ll~~g   95 (285)
T 1wdy_A           72 GATPFLLAAIAGSVKLLKLFLSKG   95 (285)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcC
Confidence            334444444444444444444433

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.96  E-value=1.3e-28  Score=176.44  Aligned_cols=150  Identities=14%  Similarity=0.123  Sum_probs=126.2

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCC--Cccccc---cccCCc-cHHHHHHhhC---CCHHHHHHHHhccchhh---
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKT--SNTLTD---KITGGL-SIFDLIVNSD---APPMFLDKLVSKVHQNF---   72 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~--~~~~~~---~~~~~~-t~L~~A~~~~---g~~~~v~~Ll~~~~~~~---   72 (174)
                      .|..|.||||.|+..|+.++++.|++.+.  ...++.   ..+..| ||||+|+. .   |+.+++++|++.+  ++   
T Consensus         9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~-~~~~g~~~~v~~Ll~~g--a~~~~   85 (273)
T 2pnn_A            9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAML-NLHNGQNDTIALLLDVA--RKTDS   85 (273)
T ss_dssp             --CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHH-SCBTTBCHHHHHHHHHH--HHTTC
T ss_pred             CCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHH-HHhcCChHHHHHHHHhh--ccccc
Confidence            46789999999999999999999887430  133331   225677 99999997 7   9999999999987  43   


Q ss_pred             ----hhhh----cccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCC--------------CCccHHHHHHhcCChHH
Q 036069           73 ----LQEW----VSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDK--------------SKLLPIHKAAQLGHRDT  130 (174)
Q Consensus        73 ----~~~~----~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~--------------~~~tpl~~a~~~~~~~~  130 (174)
                          ++ .    .|..|.||||+|+..|+.+++++|++.|++ ++.++.              .|.||||+|+..|+.++
T Consensus        86 ~~~~i~-~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~  163 (273)
T 2pnn_A           86 LKQFVN-ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAI  163 (273)
T ss_dssp             HHHHHT-CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHH
T ss_pred             hhHHhh-cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccccccccccccccccccCCCCHHHHHHHcCCHHH
Confidence                22 2    456899999999999999999999999998 588876              79999999999999999


Q ss_pred             HHHHHh---cCC-CcccCCCCcchHHHHHHcCc
Q 036069          131 VRYLLS---KTT-AHLDGHDWSTLLKDLINCNL  159 (174)
Q Consensus       131 ~~~ll~---~~~-~~~~~~~g~t~l~~a~~~~~  159 (174)
                      +++|++   .|+ .+.++..|.||||+|+..|+
T Consensus       164 v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~  196 (273)
T 2pnn_A          164 VKFLLQNSWQPADISARDSVGNTVLHALVEVAD  196 (273)
T ss_dssp             HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred             HHHHHhcccCCCCceeeCCCCCcHHHHHHHccC
Confidence            999999   777 67789999999999999776

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.96  E-value=6.7e-28  Score=153.35  Aligned_cols=124  Identities=16%  Similarity=0.211  Sum_probs=116.8

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHH
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMV   86 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~   86 (174)
                      +|.||||.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .++.+++++|++.+  .+++ .+|..|.||||
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~~~~-~~~g~t~L~~A~~-~~~~~~~~~Ll~~g--~~~~-~~~~~g~t~l~   73 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAG--ADVNAK-DKNGRTPLHLAAR-NGHLEVVKLLLEAG--ADVN-AKDKNGRTPLH   73 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHT--CCTTCC-CTTSCCHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCTTSCCHHH
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcC--CCCCCc-CCCCCcHHHHHHH-cCcHHHHHHHHHcC--CCCc-ccCCCCCcHHH
Confidence            4889999999999999999999999  888866 7788 99999999 99999999999998  7788 88999999999


Q ss_pred             HHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           87 HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      +|+..++.+++++|++.+.+ ++.+|..|.||+++|+..|+.+++++|+++|+
T Consensus        74 ~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga  125 (126)
T 1n0r_A           74 LAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA  125 (126)
T ss_dssp             HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred             HHHHcChHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence            99999999999999999998 59999999999999999999999999999875

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.96  E-value=2.1e-28  Score=182.76  Aligned_cols=129  Identities=9%  Similarity=0.041  Sum_probs=115.0

Q ss_pred             ccchhhHHHHHHHHhC---CHHHHHHHHHcCCCcccccc-------ccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhh
Q 036069            5 TDIDSVMQVTRYILKN---DWKDLEEYIMSKTSNTLTDK-------ITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFL   73 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g---~~~~~~~ll~~~~~~~~~~~-------~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~   73 (174)
                      .+..|.||||.|+..+   +.++++.|++.+  ++++..       .+..| ||||+|+. .|+.+++++|++.+ +.++
T Consensus       231 ~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g--~~~~~~~~~~~~~~d~~g~t~Lh~A~~-~g~~~~v~~Ll~~~-~~~~  306 (373)
T 2fo1_E          231 LDRNGMTALMIVAHNEGRDQVASAKLLVEKG--AKVDYDGAARKDSEKYKGRTALHYAAQ-VSNMPIVKYLVGEK-GSNK  306 (373)
T ss_dssp             CCTTSCCHHHHHHHSCSTTHHHHHHHHHHHT--CCSSCCSGGGTSSSSCCCCCTHHHHHS-SCCHHHHHHHHHHS-CCCT
T ss_pred             cCCCCCCHHHHHHHhCCcchHHHHHHHHHCC--CCcccccccccCcccccCCCHHHHHHH-hCCHHHHHHHHHhc-CCCc
Confidence            3567999999999988   899999999999  777642       24567 99999999 99999999999864 2667


Q ss_pred             hhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           74 QEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        74 ~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      + .+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||+++|+..|+.+++++|+++++
T Consensus       307 n-~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad-~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a  370 (373)
T 2fo1_E          307 D-KQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFDRCRP  370 (373)
T ss_dssp             T-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred             c-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence            7 8999999999999999999999999999999 59999999999999999999999999999876

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.96  E-value=1.1e-28  Score=159.59  Aligned_cols=126  Identities=16%  Similarity=0.105  Sum_probs=104.1

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccC-Cc
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNE-GN   82 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~-g~   82 (174)
                      .+.+|.||||.|+..|+.+++++|++.+  .+++.. +..| ||||+|+.  |+.+++++|++.+  .+++ .+|.. |.
T Consensus         8 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~--~~~~~v~~Ll~~g--~~~~-~~~~~~g~   79 (136)
T 1d9s_A            8 LGGSSDAGLATAAARGQVETVRQLLEAG--ADPNAL-NRFGRRPIQVMMM--GSAQVAELLLLHG--AEPN-CADPATLT   79 (136)
T ss_dssp             CCCCCSCHHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTCCTTTTTSTT--SCHHHHHHHHHHT--CCSS-CCBTTTTB
T ss_pred             CCCCCccHHHHHHHcCCHHHHHHHHHcC--CCcCCc-CCCCCCHHHHHHc--CCHHHHHHHHHCC--CCCC-CcCCCCCC
Confidence            4567888888888888888888888888  777755 6777 88888887  8888888888887  7777 78887 88


Q ss_pred             hHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           83 ACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        83 ~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      ||||+|+..|+.+++++|++.+++ ++.+|..|.||+++|+..|+.+++++|+++|+
T Consensus        80 t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga  135 (136)
T 1d9s_A           80 RPVHDAAREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAATG  135 (136)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            888888888888888888888887 48888888888888888888888888888764

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.96  E-value=2.9e-29  Score=175.93  Aligned_cols=153  Identities=10%  Similarity=0.011  Sum_probs=136.3

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+.++.+|||.|+..|+.++++.|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.|
T Consensus        17 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~-d~~g~tpLh~A~~-~g~~~~v~~Ll~~g--a~~n-~~d~~g~t   89 (229)
T 2vge_A           17 ARLNPLVLLLDAALTGELEVVQQAVKEM--NDPSQP-NEEGITALHNAIC-GANYSIVDFLITAG--ANVN-SPDSHGWT   89 (229)
T ss_dssp             TTSCHHHHHHHHHHHTCHHHHHHHHHHS--SCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTCCC
T ss_pred             cccchhHHHHHHHHcCCHHHHHHHHhcC--CCCCCC-CCCCCCHHHHHHH-cCCHHHHHHHHHCC--CCCC-CCCCCCCC
Confidence            3567999999999999999999999999  889866 8888 99999999 99999999999999  8888 99999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCC-CCCccHHHHH--HhcCChHHHHHHHhcCC-Cc------------------
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRD-KSKLLPIHKA--AQLGHRDTVRYLLSKTT-AH------------------  141 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~tpl~~a--~~~~~~~~~~~ll~~~~-~~------------------  141 (174)
                      |||+|+..|+.+++++|++.|++ ++.++ ..|.|||++|  +..|+.+++++|++.|+ .+                  
T Consensus        90 pLh~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~  168 (229)
T 2vge_A           90 PLHCAASCNDTVICMALVQHGAA-IFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG  168 (229)
T ss_dssp             HHHHHHHTTCHHHHHHHHTTTCC-TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSST
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccc
Confidence            99999999999999999999999 47775 6999999999  99999999999998654 21                  


Q ss_pred             ------------c--cCCCCcchHHHHHHcCccccccc
Q 036069          142 ------------L--DGHDWSTLLKDLINCNLFGKYYS  165 (174)
Q Consensus       142 ------------~--~~~~g~t~l~~a~~~~~~~~~~~  165 (174)
                                  .  ++..|.|||++|+..|+.+++..
T Consensus       169 ~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~  206 (229)
T 2vge_A          169 DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR  206 (229)
T ss_dssp             TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred             cccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence                        1  45668899999999998888754

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.95  E-value=6.9e-28  Score=168.83  Aligned_cols=151  Identities=15%  Similarity=0.112  Sum_probs=84.2

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHH
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACM   85 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l   85 (174)
                      ..|.||||.|+..|+.+++++|++.+  .+++...+..+ ||||+|+. .|+.+++++|++.+  .+++ ..+..|.|||
T Consensus        40 ~~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t~l  113 (240)
T 3eu9_A           40 KENVTLLHWAAINNRIDLVKYYISKG--AIVDQLGGDLNSTPLHWATR-QGHLSMVVQLMKYG--ADPS-LIDGEGCSCI  113 (240)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCBTTTTBCHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCTTSCCHH
T ss_pred             CCCCCHHHHHHHhCCHHHHHHHHHcC--CcchhhcCCcCCChhHHHHH-cCCHHHHHHHHHcC--CCCc-ccCCCCCCHH
Confidence            34555555555555555555555555  33333323334 55555555 55555555555554  4444 4444555555


Q ss_pred             HHHHhcCCHHHHHHHHHhCCCC---------------------------------CCCCCC-CCccHHHHHHhcCChHHH
Q 036069           86 VHAATGGKSKLIEILMRYNPNL---------------------------------PNVRDK-SKLLPIHKAAQLGHRDTV  131 (174)
Q Consensus        86 ~~A~~~~~~~~~~~Ll~~~~~~---------------------------------~~~~~~-~~~tpl~~a~~~~~~~~~  131 (174)
                      |+|+..|+.+++++|++.+.++                                 ++..+. .|.||||+|+..|+.+++
T Consensus       114 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v  193 (240)
T 3eu9_A          114 HLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVI  193 (240)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHH
T ss_pred             HHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHH
Confidence            5555555555555555544442                                 244443 566677777777777777


Q ss_pred             HHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069          132 RYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       132 ~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ++|+++|+ .+..+..|.|||++|+..|+.+++
T Consensus       194 ~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v  226 (240)
T 3eu9_A          194 SLLLEAGANVDAQNIKGESALDLAKQRKNVWMI  226 (240)
T ss_dssp             HHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred             HHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence            77777766 555666677777777777666655

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.95  E-value=7.2e-28  Score=159.84  Aligned_cols=127  Identities=13%  Similarity=0.062  Sum_probs=118.4

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+..|.||||.|+. |+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.|
T Consensus        34 ~~~~g~t~L~~A~~-~~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t  105 (162)
T 1ihb_A           34 QNGFGRTALQVMKL-GNPEIARRLLLRG--ANPDLK-DRTGFAVIHDAAR-AGFLDTLQTLLEFQ--ADVN-IEDNEGNL  105 (162)
T ss_dssp             CCTTSCCHHHHCCS-SCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCTTSCC
T ss_pred             cCccCccHHHHHHc-CcHHHHHHHHHcC--CCCCCC-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-CcCCCCCC
Confidence            35679999999999 9999999999999  888866 7788 99999999 99999999999998  8888 89999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      |||+|+..|+.+++++|++.+++.++.++..|.||+++|+..|+.+++++|+++|+
T Consensus       106 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA  161 (162)
T 1ihb_A          106 PLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA  161 (162)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred             HHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence            99999999999999999999998558899999999999999999999999999885

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.95  E-value=2.8e-27  Score=158.33  Aligned_cols=126  Identities=13%  Similarity=0.101  Sum_probs=118.0

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+.+|.||||.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.|
T Consensus        43 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~~~~Ll~~g--~~~~-~~~~~g~t  115 (169)
T 2y1l_E           43 EDASGWTPLHLAAFNGHLEIVEVLLKNG--ADVNAV-DHAGMTPLRLAAL-FGHLEIVEVLLKNG--ADVN-ANDMEGHT  115 (169)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTSCC
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCcc-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-CCCCCCCC
Confidence            4567999999999999999999999999  888866 7788 99999999 99999999999999  8888 89999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcC
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKT  138 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~  138 (174)
                      |||+|+..++.+++++|++.|++ ++.+|..|.||+++|+..|+.+++++|++.|
T Consensus       116 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G  169 (169)
T 2y1l_E          116 PLHLAAMFGHLEIVEVLLKNGAD-VNAQDKFGKTAFDISIDNGNEDLAEILQKLN  169 (169)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence            99999999999999999999999 5999999999999999999999999999875

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.95  E-value=7.6e-28  Score=171.13  Aligned_cols=146  Identities=16%  Similarity=0.124  Sum_probs=124.5

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHH----cCCCccccccc---cCCc-cHHHHHH---hhCCCHHHHHHHHhccchhh---
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIM----SKTSNTLTDKI---TGGL-SIFDLIV---NSDAPPMFLDKLVSKVHQNF---   72 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~----~~~~~~~~~~~---~~~~-t~L~~A~---~~~g~~~~v~~Ll~~~~~~~---   72 (174)
                      ..+.++||.|++.|+.+.++.|++    .+  .+++...   +..| ||||+|+   + .|+.+++++|++.+  ++   
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~--~~~~~~~~~~~~~g~t~L~~A~~~~~-~g~~~~v~~Ll~~g--~~~~~   77 (260)
T 3jxi_A            3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHK--KRLTDEEFREPSTGKTCLPKALLNLS-AGRNDTIPILLDIA--EKTGN   77 (260)
T ss_dssp             CCCHHHHHHHHHHTCGGGGTTHHHHHHHHT--CCTTSGGGSCTTTCCCHHHHHHTSCB-TTBCTHHHHHHHHH--HHTTC
T ss_pred             cchHHHHHHHHHhCCHHHHHHHHHHHHhcC--CCcchhhhhccCCCCcHHHHHHHHhh-cCCHHHHHHHHHhc--ccccc
Confidence            458899999999999996555555    77  7777551   1557 9999999   7 79999999999987  33   


Q ss_pred             --------hhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCC--------------CCCccHHHHHHhcCChHH
Q 036069           73 --------LQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRD--------------KSKLLPIHKAAQLGHRDT  130 (174)
Q Consensus        73 --------~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~--------------~~~~tpl~~a~~~~~~~~  130 (174)
                              .. ..|..|.||||+|+..|+.+++++|++.|++ ++.++              ..|.||||+|+..|+.++
T Consensus        78 ~~~~~~~~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~  155 (260)
T 3jxi_A           78 MREFINSPFR-DVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHI  155 (260)
T ss_dssp             HHHHHTCCBC-CSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHH
T ss_pred             hHhhhccccc-ccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCCHHH
Confidence                    22 3445899999999999999999999999999 58887              689999999999999999


Q ss_pred             HHHHHh---cCC-CcccCCCCcchHHHHHHcCc
Q 036069          131 VRYLLS---KTT-AHLDGHDWSTLLKDLINCNL  159 (174)
Q Consensus       131 ~~~ll~---~~~-~~~~~~~g~t~l~~a~~~~~  159 (174)
                      +++|++   .|+ .+.++..|.||||+|+..|+
T Consensus       156 v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~  188 (260)
T 3jxi_A          156 VHYLTENGHKQADLRRQDSRGNTVLHALVAIAD  188 (260)
T ss_dssp             HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred             HHHHHhccccCCCCcccCCCCCcHHHHHHHhcc
Confidence            999999   777 67789999999999998665

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.95  E-value=5.4e-27  Score=164.26  Aligned_cols=147  Identities=17%  Similarity=0.182  Sum_probs=132.1

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      |..+.++|+.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  ..+....+..|.||
T Consensus         6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~~--~~~~~~~~~~~~t~   79 (240)
T 3eu9_A            6 DDYSTWDIVKATQYGIYERCRELVEAG--YDVRQP-DKENVTLLHWAAI-NNRIDLVKYYISKG--AIVDQLGGDLNSTP   79 (240)
T ss_dssp             SCGGGCCHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTTCCBTTTTBCH
T ss_pred             ccccchHHHHHHHcCChHHHHHHHHcC--CCcCCC-CCCCCCHHHHHHH-hCCHHHHHHHHHcC--CcchhhcCCcCCCh
Confidence            567899999999999999999999999  888866 7788 99999999 99999999999998  55541334559999


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCc
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNL  159 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~  159 (174)
                      ||+|+..|+.+++++|++.+++ ++.++..|.||+++|+..|+.+++++|+++++ .+..+..|.|||+.|+..+.
T Consensus        80 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~  154 (240)
T 3eu9_A           80 LHWATRQGHLSMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTH  154 (240)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCC
T ss_pred             hHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Confidence            9999999999999999999998 58899999999999999999999999999988 66788899999999997665

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.95  E-value=8.7e-29  Score=168.30  Aligned_cols=152  Identities=13%  Similarity=0.053  Sum_probs=131.5

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCH----HHHHHHHhccchhhhhhhcccCCc
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPP----MFLDKLVSKVHQNFLQEWVSNEGN   82 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~----~~v~~Ll~~~~~~~~~~~~d~~g~   82 (174)
                      +++++|+.|++.|+.+.++.++..+  .  +...+..| ||||+|+. .|+.    +++++|++.+  ++++ .+|..|.
T Consensus         5 ~~~~~l~~Aa~~g~~~~~~~l~~~~--~--~~~~~~~g~T~Lh~A~~-~~~~~~~~~iv~~Ll~~G--advn-~~d~~g~   76 (186)
T 3t8k_A            5 SEYRTVSAAAMLGTYEDFLELFEKG--Y--EDKESVLKSNILYDVLR-NNNDEARYKISMFLINKG--ADIK-SRTKEGT   76 (186)
T ss_dssp             HHCSSHHHHHHHSCHHHHHHHHHHS--S--SCHHHHHTTTHHHHHTT-CSCHHHHHHHHHHHHHTT--CCSS-CCCTTCC
T ss_pred             ccccHHHHHHHcCCHHHHHHHHhcC--c--ccccccCCCCHHHHHHH-cCCcchHHHHHHHHHHCC--CCCC-CCCCCCC
Confidence            5778999999999999999999887  3  22313567 99999999 9975    5899999999  8898 9999999


Q ss_pred             hHHHHHHhcCC------HHHHHHHHHhCCCCCCCCCCCCc-cHHHHHHhcC-----ChHHHHHHHh-cCC-CcccCCCCc
Q 036069           83 ACMVHAATGGK------SKLIEILMRYNPNLPNVRDKSKL-LPIHKAAQLG-----HRDTVRYLLS-KTT-AHLDGHDWS  148 (174)
Q Consensus        83 ~~l~~A~~~~~------~~~~~~Ll~~~~~~~~~~~~~~~-tpl~~a~~~~-----~~~~~~~ll~-~~~-~~~~~~~g~  148 (174)
                      ||||+|+..++      .+++++|++.|++ ++.+|..|. ||||+|+..+     +.+++++|++ .|+ .+.++..|.
T Consensus        77 TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~  155 (186)
T 3t8k_A           77 TLFFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGL  155 (186)
T ss_dssp             CTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSC
T ss_pred             cHHHHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCC
Confidence            99999998886      5789999999999 599999999 9999999954     3569999999 888 778999999


Q ss_pred             chHHHHHHcCcccccccccc
Q 036069          149 TLLKDLINCNLFGKYYSAEP  168 (174)
Q Consensus       149 t~l~~a~~~~~~~~~~~~~~  168 (174)
                      |||++|+..|+.+++.-+..
T Consensus       156 TpL~~A~~~~~~~~v~~L~~  175 (186)
T 3t8k_A          156 TALEFVKRCQKPIALKMMED  175 (186)
T ss_dssp             CHHHHHHTTTCHHHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHH
Confidence            99999999998877754433

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.95  E-value=8.4e-27  Score=171.58  Aligned_cols=152  Identities=13%  Similarity=0.127  Sum_probs=138.3

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      +.+|.|+|+.|++.|+.++|+.||+.|  ++++.+.+..| ||||+|+. .|+.+++++|++++  ++++ .++..+.++
T Consensus        22 ~~~~~t~L~~Av~~g~~~~V~~LL~~G--advn~~~~~~g~TpLh~A~~-~g~~~iv~~Ll~~g--a~~~-~~~~~~~~~   95 (337)
T 4g8k_A           22 AVEDNHLLIKAVQNEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQ-MSREDIVELLLRHG--ADPV-LRKKNGATP   95 (337)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHT--CCTTCCCTTTCCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTCCCH
T ss_pred             CCCCChHHHHHHHcCCHHHHHHHHHCC--CCCCccCCCCCcCHHHHHHH-cCCHHHHHHHHHcC--Cchh-hhccCCCch
Confidence            346899999999999999999999999  99997744567 99999999 99999999999999  8888 899999999


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-Ccc----------cCCCCcchHHH
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHL----------DGHDWSTLLKD  153 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~----------~~~~g~t~l~~  153 (174)
                      ++.++..+...++..++..+.+ ++..|..|.||+++|+..|+.+++++|+++|+ .+.          .+..|.||||.
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~  174 (337)
T 4g8k_A           96 FILAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMD  174 (337)
T ss_dssp             HHHHHHHTCHHHHHHHHTTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHH
T ss_pred             hHHHHhcccchhhHHhhhccch-hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHH
Confidence            9999999999999999999998 59999999999999999999999999999987 433          34568999999


Q ss_pred             HHHcCcccccc
Q 036069          154 LINCNLFGKYY  164 (174)
Q Consensus       154 a~~~~~~~~~~  164 (174)
                      |+..|+.+++-
T Consensus       175 A~~~g~~~~v~  185 (337)
T 4g8k_A          175 AAEKGHVEVLK  185 (337)
T ss_dssp             HHHHTCHHHHH
T ss_pred             HHHCCCHHHHH
Confidence            99999988763

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.95  E-value=4.6e-27  Score=154.79  Aligned_cols=122  Identities=11%  Similarity=0.094  Sum_probs=115.0

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+..|.||||.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.|
T Consensus        30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t  102 (153)
T 1awc_B           30 TDWLGTSPLHLAAQYGHFSTTEVLLRAG--VSRDAR-TKVDRTPLHMAAS-EGHANIVEVLLKHG--ADVN-AKDMLKMT  102 (153)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHTTT--CCTTCC-CTTCCCHHHHHHH-HTCHHHHHHHHTTT--CCTT-CCCTTSCC
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCC-CCCCCCHHHHHHH-cChHHHHHHHHHcC--CCCC-CCCCCCCC
Confidence            4667999999999999999999999999  888866 7788 99999999 99999999999998  8888 89999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHH
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYL  134 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~l  134 (174)
                      |||+|+..|+.+++++|++.|++ ++.+|..|.||+++|+..|+.+++++|
T Consensus       103 ~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B          103 ALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            99999999999999999999999 599999999999999999999999987

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.95  E-value=2.9e-27  Score=157.53  Aligned_cols=125  Identities=13%  Similarity=0.083  Sum_probs=115.2

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      +..|.||||.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.||
T Consensus        39 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t~  111 (165)
T 3twr_A           39 EGRQSTPLHFAAGYNRVSVVEYLLQHG--ADVHAK-DKGGLVPLHNACS-YGHYEVAELLVKHG--AVVN-VADLWKFTP  111 (165)
T ss_dssp             TTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTCCCH
T ss_pred             ccCCCCHHHHHHHcChHHHHHHHHhcC--CCCCcc-CCCCCCHHHHHHH-cCcHHHHHHHHhCC--CCCC-CcCCCCCCH
Confidence            446789999999999999999999999  888866 7788 99999999 99999999999999  8888 899999999


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      ||+|+..|+.+++++|++.|++ ++.+|..|.||+++|.. |+.+++++|+++|+
T Consensus       112 L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA  164 (165)
T 3twr_A          112 LHEAAAKGKYEICKLLLQHGAD-PTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA  164 (165)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred             HHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence            9999999999999999999999 59999999999999776 99999999998875

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.95  E-value=3.5e-27  Score=173.67  Aligned_cols=148  Identities=14%  Similarity=0.093  Sum_probs=134.9

Q ss_pred             cccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCc
Q 036069            4 ITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGN   82 (174)
Q Consensus         4 ~~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~   82 (174)
                      +.+..+.++|+.|+..|+.+.++.++... +.+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.
T Consensus        19 ~~~~~~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~-d~~g~t~L~~A~~-~g~~~~v~~Ll~~g--~~~~-~~~~~g~   92 (351)
T 3utm_A           19 LTGEYKKDELLEAARSGNEEKLMALLTPL-NVNCHAS-DGRKSTPLHLAAG-YNRVRIVQLLLQHG--ADVH-AKDKGGL   92 (351)
T ss_dssp             HHHHHHHHHHHHHHHHTCHHHHHHHCCTT-TTTCCCS-STTCCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTCC
T ss_pred             eeccccchhHHHHHHcCCHHHHHHHHHhc-CCCcccC-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-ccCCCCC
Confidence            34567999999999999999999999875 5788766 7888 99999999 99999999999999  8888 8999999


Q ss_pred             hHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcC
Q 036069           83 ACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCN  158 (174)
Q Consensus        83 ~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~  158 (174)
                      ||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|+++|+ ....+..|.|+++.++..+
T Consensus        93 t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~  168 (351)
T 3utm_A           93 VPLHNACSYGHYEVTELLLKHGAC-VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPE  168 (351)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHH
T ss_pred             cHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhh
Confidence            999999999999999999999999 59999999999999999999999999999999 7778899999998876443

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.95  E-value=5.5e-27  Score=159.82  Aligned_cols=126  Identities=13%  Similarity=0.122  Sum_probs=118.4

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+..|.||||.|+..|+.+++++|++.+  ++++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.|
T Consensus        64 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t  136 (192)
T 2rfm_A           64 KDIEGSTALIWAVKNNRLGIAEKLLSKG--SNVNTK-DFSGKTPLMWSII-FGYSEMSYFLLEHG--ANVN-DRNLEGET  136 (192)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHHT--CCTTCC-CTTSCCHHHHHHH-HTCHHHHHHHHHTT--CCSS-CCCTTCCC
T ss_pred             ccccCccHHHHHHHcCCHHHHHHHHHCC--CCCCCC-CCCCCcHHHHHHH-cCCHHHHHHHHHCC--CCCC-CCCCCCCC
Confidence            4567999999999999999999999999  888866 7788 99999999 99999999999999  8888 89999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcC
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKT  138 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~  138 (174)
                      |||+|+..|+.+++++|++.|++ ++.+|..|.||+++|+..|+.+++++|++++
T Consensus       137 ~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~  190 (192)
T 2rfm_A          137 PLIVASKYGRSEIVKKLLELGAD-ISARDLTGLTAEASARIFGRQEVIKIFTEVR  190 (192)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence            99999999999999999999999 5999999999999999999999999999864

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.95  E-value=7e-27  Score=155.94  Aligned_cols=127  Identities=15%  Similarity=0.128  Sum_probs=119.4

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+.+|.||||.|+..|+.+++++|++.+  ++++.. +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.|
T Consensus        32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t  104 (167)
T 3v31_A           32 TDEEGFTPLMWAAAHGQIAVVEFLLQNG--ADPQLL-GKGRESALSLACS-KGYTDIVKMLLDCG--VDVN-EYDWNGGT  104 (167)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTCCCHHHHHHH-HTCHHHHHHHHHHT--CCTT-CCCTTSCC
T ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHHcC--CCCCCc-CCCCCcHHHHHHH-cCCHHHHHHHHHCC--CCCC-cCCCCCCC
Confidence            4667999999999999999999999999  888866 7788 99999999 99999999999998  8888 89999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      |||+|+..|+.+++++|++.|++ ++.+|..|.||+++|+..|+.+++++|++++.
T Consensus       105 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~  159 (167)
T 3v31_A          105 PLLYAVHGNHVKCVKMLLESGAD-PTIETDSGYNSMDLAVALGYRSVQQVIESHLL  159 (167)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence            99999999999999999999999 59999999999999999999999999998865

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.94  E-value=7.9e-27  Score=169.63  Aligned_cols=139  Identities=12%  Similarity=0.107  Sum_probs=121.6

Q ss_pred             hhHHHHHHHHhCCHHHHHHHHHcCCCcccccc-----ccCCc-cHHHHHHhhC---CCHHHHHHHHhccchhhhhhhccc
Q 036069            9 SVMQVTRYILKNDWKDLEEYIMSKTSNTLTDK-----ITGGL-SIFDLIVNSD---APPMFLDKLVSKVHQNFLQEWVSN   79 (174)
Q Consensus         9 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~-----~~~~~-t~L~~A~~~~---g~~~~v~~Ll~~~~~~~~~~~~d~   79 (174)
                      ..++|+.|+..|+.+.++.|++.+  .+++..     .+..| ||||+|+. .   |+.+++++|++.+  ++++ .+|.
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll~~g--~d~~~~~~~~~~~~~g~t~Lh~A~~-~~~~~~~~iv~~Ll~~g--advn-~~d~  224 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVK-VANQASLPLVDFIIQNG--GHLD-AKAA  224 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHTT--CCTTSCEECSSSCSCEECHHHHHHH-TCCTTTHHHHHHHHHHS--SCTT-CCCT
T ss_pred             hHHHHhhhhhccCHHHHHHHHhcC--CcccccCCCcccCCCCccHHHHHHH-hcccCcHHHHHHHHhcC--CCCC-CCCC
Confidence            567899999999999999999999  888752     36778 99999999 7   8999999999999  8888 9999


Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCCCcccCCCCcchHHHHHHcCc
Q 036069           80 EGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNL  159 (174)
Q Consensus        80 ~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~g~t~l~~a~~~~~  159 (174)
                      .|.||||+|+..|+.+++++|++.|++ ++.+|..|.|||++|+..|+.+++++|++.++.     .|.||||+|+..|+
T Consensus       225 ~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-----~g~tpLh~A~~~g~  298 (301)
T 2b0o_E          225 DGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG-----TFAFPLHVDYSWVI  298 (301)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-----TTSSCCC-------
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-----CCCChhHHHHhcCC
Confidence            999999999999999999999999999 599999999999999999999999999998764     57999999999886

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.94  E-value=7.7e-27  Score=157.50  Aligned_cols=127  Identities=15%  Similarity=0.063  Sum_probs=120.6

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+..|.||||.|+..|+.+++++|++.+  ++++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.|
T Consensus        35 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~d~~g~t  107 (179)
T 3f6q_A           35 GDDHGFSPLHWACREGRSAVVEMLIMRG--ARINVM-NRGDDTPLHLAAS-HGHRDIVQKLLQYK--ADIN-AVNEHGNV  107 (179)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTCCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTSCC
T ss_pred             cCCCCCCHHHHHHHcCcHHHHHHHHHcC--CCCCCc-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-ccCCCCCC
Confidence            4667999999999999999999999999  899866 7888 99999999 99999999999999  8888 99999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      |||+|+..++.+++++|++.|++ ++.+|..|.||+++|+..++.+++++|++.|+
T Consensus       108 ~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~  162 (179)
T 3f6q_A          108 PLHYACFWGQDQVAEDLVANGAL-VSICNKYGEMPVDKAKAPLRELLRERAEKMGQ  162 (179)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC-SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCC-cchhccCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999999 59999999999999999999999999999998

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.94  E-value=5.7e-27  Score=151.55  Aligned_cols=123  Identities=14%  Similarity=0.038  Sum_probs=114.0

Q ss_pred             ccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCC
Q 036069           35 NTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDK  113 (174)
Q Consensus        35 ~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~  113 (174)
                      .+++.. +..+ ||||+|+. .|+.+++++|++.+  .+++ .+|..|.||||+|+. ++.+++++|++.+++ ++.+|.
T Consensus         3 ~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~   75 (136)
T 1d9s_A            3 PGIHML-GGSSDAGLATAAA-RGQVETVRQLLEAG--ADPN-ALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADP   75 (136)
T ss_dssp             CCCSCC-CCCCSCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBT
T ss_pred             CCccCC-CCCCccHHHHHHH-cCCHHHHHHHHHcC--CCcC-CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCC
Confidence            566755 7778 99999999 99999999999998  8888 899999999999999 999999999999999 599999


Q ss_pred             C-CccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          114 S-KLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       114 ~-~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      . |.||||+|+..|+.+++++|+++|+ .+.++..|.|||++|+..|+.+++.
T Consensus        76 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~  128 (136)
T 1d9s_A           76 ATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIAR  128 (136)
T ss_dssp             TTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHH
Confidence            9 9999999999999999999999998 7778999999999999999988764

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.94  E-value=1.3e-27  Score=154.63  Aligned_cols=126  Identities=12%  Similarity=0.137  Sum_probs=101.1

Q ss_pred             cccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCc
Q 036069            4 ITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGN   82 (174)
Q Consensus         4 ~~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~   82 (174)
                      ..+.+|.||||.|+..|+.+++++|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.
T Consensus         5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~~~~Ll~~g--~~~~-~~~~~g~   77 (137)
T 3c5r_A            5 FTNHRGETLLHIASIKGDIPSVEYLLQNG--SDPNVK-DHAGWTPLHEACN-HGHLKVVELLLQHK--ALVN-TTGYQND   77 (137)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHHTT--CCSCCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCGGGC
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCcC-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--Cccc-CcCCCCC
Confidence            45677888888888888888888888888  777755 6777 88888888 88888888888887  7777 7888888


Q ss_pred             hHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhc
Q 036069           83 ACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK  137 (174)
Q Consensus        83 ~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~  137 (174)
                      ||||+|+..++.+++++|++.|++ ++.+|..|.||+++|+..+..++++++.+.
T Consensus        78 t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~  131 (137)
T 3c5r_A           78 SPLHDAAKNGHVDIVKLLLSYGAS-RNAVNIFGLRPVDYTDDESMKSLLLLPEKN  131 (137)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence            888888888888888888888888 488888888888888887777777666544

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.94  E-value=1.4e-26  Score=152.70  Aligned_cols=123  Identities=15%  Similarity=0.057  Sum_probs=115.1

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+..|.||||. +..|+.+++++|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.|
T Consensus        32 ~~~~g~t~L~~-~~~~~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~~~~g~t  103 (156)
T 1bd8_A           32 LNRFGKTALQV-MMFGSTAIALELLKQG--ASPNVQ-DTSGTSPVHDAAR-TGFLDTLKVLVEHG--ADVN-VPDGTGAL  103 (156)
T ss_dssp             CCTTSCCHHHH-SCTTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCSC-CCCTTSCC
T ss_pred             cCCCCCcHHHH-HHcCCHHHHHHHHHCC--CCCCCc-CCCCCCHHHHHHH-cCcHHHHHHHHHcC--CCCC-CcCCCCCc
Confidence            46679999999 9999999999999999  889866 7888 99999999 99999999999999  8888 89999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK  137 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~  137 (174)
                      |||+|+..|+.+++++|++. ++ ++.+|..|.||+++|+..|+.+++++|+++
T Consensus       104 ~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A          104 PIHLAVQEGHTAVVSFLAAE-SD-LHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHHTCHHHHHHHHTT-SC-TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             HHHHHHHhChHHHHHHHHhc-cC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence            99999999999999999999 77 589999999999999999999999999875

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.94  E-value=2.7e-26  Score=168.91  Aligned_cols=148  Identities=9%  Similarity=-0.001  Sum_probs=128.7

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCC----HHHHHHHHhccchhhhhhhcccC
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAP----PMFLDKLVSKVHQNFLQEWVSNE   80 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~----~~~v~~Ll~~~~~~~~~~~~d~~   80 (174)
                      +..|.||||.|+..|+.++++.|+++. +++++.. +..| ++++.++. .+.    .+++++|++.+  ++++ .+|..
T Consensus       165 ~~~g~T~L~~A~~~g~~~~v~~LL~~~-gad~n~~-d~~g~t~l~~~~~-~~~~~~~~~i~~lLl~~g--ad~n-~~d~~  238 (337)
T 4g8k_A          165 RKGGATALMDAAEKGHVEVLKILLDEM-GADVNAC-DNMGRNALIHALL-SSDDSDVEAITHLLLDHG--ADVN-VRGER  238 (337)
T ss_dssp             TTCSCCHHHHHHHHTCHHHHHHHHHHS-CCCTTCC-CTTSCCHHHHHHH-HSCTTTHHHHHHHHHHTT--CCTT-CCCGG
T ss_pred             cCCCCcHHHHHHHCCCHHHHHHHHhcc-CCCcCcc-CCCCCcHHHHHHH-HcCcccHHHHHHHHHHCC--CCCC-CcCCC
Confidence            456899999999999999999999753 3899866 7888 99988765 433    46889999999  8888 99999


Q ss_pred             CchHHHHHHhcCCHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCCCcccCCCCcchHHHHHHcCc
Q 036069           81 GNACMVHAATGGKSKLIEILMRY-NPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNL  159 (174)
Q Consensus        81 g~~~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~g~t~l~~a~~~~~  159 (174)
                      |.||||+|+..|+.+++++|++. +.+ ++.+|..|+||||+|+..|+.+++++|+++|+.    .+..+||+.|+..|+
T Consensus       239 g~t~L~~a~~~~~~~~v~~Ll~~~~~~-vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd----~n~~~~L~~A~~~~~  313 (337)
T 4g8k_A          239 GKTPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRGAS----TDCGDLVMTARRNYD  313 (337)
T ss_dssp             GCCHHHHHHHTTCHHHHHHHHTSTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS----STTCCHHHHHHHTTC
T ss_pred             CCCHHHHHHHhhhhHHHHHHHHhcCCc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCCCHHHHHHHcCC
Confidence            99999999999999999999986 566 699999999999999999999999999999972    234679999999999


Q ss_pred             ccccc
Q 036069          160 FGKYY  164 (174)
Q Consensus       160 ~~~~~  164 (174)
                      .+++-
T Consensus       314 ~~iv~  318 (337)
T 4g8k_A          314 HSLVK  318 (337)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.94  E-value=4.6e-27  Score=165.56  Aligned_cols=145  Identities=9%  Similarity=-0.011  Sum_probs=128.7

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHH
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACM   85 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l   85 (174)
                      ..|.||||.|+..|+.++++.|++.+  ++++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.|||
T Consensus        35 ~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~-d~~g~t~L~~A~~-~g~~~~v~~Ll~~g--a~~~-~~d~~g~tpL  107 (239)
T 1ycs_B           35 PLPLALLLDSSLEGEFDLVQRIIYEV--DDPSLP-NDEGITALHNAVC-AGHTEIVKFLVQFG--VNVN-AADSDGWTPL  107 (239)
T ss_dssp             --CHHHHHHHHHHTCHHHHHHHTSTT--SSCCCC-CTTSCCHHHHHHH-HTCHHHHHHHHHHT--CCTT-CCCTTCCCHH
T ss_pred             chhhHHHHHHHHcCCHHHHHHHHHcC--CCCCCc-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-ccCCCCCCHH
Confidence            35799999999999999999999999  789866 8888 99999999 99999999999998  8888 9999999999


Q ss_pred             HHHHhcCCHHHHHHHHHhCCCCCCCCCCCCc-cHHHHH--HhcCChHHHHHHHhcCC-Cccc---------CCCCcchHH
Q 036069           86 VHAATGGKSKLIEILMRYNPNLPNVRDKSKL-LPIHKA--AQLGHRDTVRYLLSKTT-AHLD---------GHDWSTLLK  152 (174)
Q Consensus        86 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-tpl~~a--~~~~~~~~~~~ll~~~~-~~~~---------~~~g~t~l~  152 (174)
                      |+|+..|+.+++++|+++|++ ++.++..|. ||+++|  +..|+.+++++|++.++ ....         +..+.++++
T Consensus       108 ~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~e  186 (239)
T 1ycs_B          108 HCAASCNNVQVCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDE  186 (239)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTB
T ss_pred             HHHHHcCCHHHHHHHHHcCCC-cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCc
Confidence            999999999999999999999 488887776 999999  78899999999999887 4432         556788888


Q ss_pred             HHHHcCc
Q 036069          153 DLINCNL  159 (174)
Q Consensus       153 ~a~~~~~  159 (174)
                      +++..|.
T Consensus       187 La~~~G~  193 (239)
T 1ycs_B          187 LPMKEGD  193 (239)
T ss_dssp             CCBCSSC
T ss_pred             ccccCCC
Confidence            7777665

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.94  E-value=6.1e-27  Score=163.06  Aligned_cols=131  Identities=11%  Similarity=0.097  Sum_probs=111.9

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhc-cchhhhhhhcccCCch
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSK-VHQNFLQEWVSNEGNA   83 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~-~~~~~~~~~~d~~g~~   83 (174)
                      +.+|.||||.|+..|+.++++.|++.+  .+++.. +..| ||||+|+. .|+.+++++|++. +  .+++ .+|..|.|
T Consensus        70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~~g--~~~~-~~d~~g~t  142 (222)
T 3ehr_A           70 AESIDNPLHEAAKRGNLSWLRECLDNR--VGVNGL-DKAGSTALYWACH-GGHKDIVEMLFTQPN--IELN-QQNKLGDT  142 (222)
T ss_dssp             EEEESCHHHHHHHHTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHTTSTT--CCCC-CCCTTSCC
T ss_pred             ccccccccccccccCcHHHHHHHHhCC--CCcccc-CCCCCCHHHHHHH-cCCHHHHHHHHcCCC--CCcc-ccCCCCCC
Confidence            456889999999999999999999999  888866 7888 99999999 9999999999998 7  7788 89999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccC
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDG  144 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~  144 (174)
                      |||+|+..|+.+++++|++.|++ ++.+|..|.||+++|+..|+.++++.|+..++ ....+
T Consensus       143 pL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~  203 (222)
T 3ehr_A          143 ALHAAAWKGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSN  203 (222)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence            99999999999999999999999 59999999999999999999999999999988 54433

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.94  E-value=3.9e-26  Score=147.61  Aligned_cols=118  Identities=16%  Similarity=0.110  Sum_probs=109.7

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHH
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIH  120 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~  120 (174)
                      ...+ |+||+|+. .|+.+++++|++.+  .+++ ..|..|.||||+|+..++.+++++|++.+++ ++.+|..|.||||
T Consensus        11 ~~~~~t~l~~A~~-~g~~~~v~~Ll~~g--~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~   85 (136)
T 2jab_A           11 GSDLGKKLLEAAR-AGQDDEVRILMANG--ADVN-AKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLH   85 (136)
T ss_dssp             -CHHHHHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHH
T ss_pred             cccccHHHHHHHH-hCCHHHHHHHHHcC--CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHH
Confidence            4456 99999999 99999999999998  8888 8999999999999999999999999999998 5999999999999


Q ss_pred             HHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          121 KAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       121 ~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      +|+..|+.+++++|+++|+ .+..+..|.|||+.|+..|+.+++.
T Consensus        86 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~  130 (136)
T 2jab_A           86 LAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAE  130 (136)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             HHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHH
Confidence            9999999999999999998 6778999999999999999988764

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.93  E-value=3.9e-26  Score=154.66  Aligned_cols=135  Identities=11%  Similarity=0.003  Sum_probs=118.7

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcc-cCCch
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVS-NEGNA   83 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d-~~g~~   83 (174)
                      +.+|.||||.|+..|+.++++.|++ +  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+| ..|.|
T Consensus        41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~--~~~~~~-d~~g~t~L~~A~~-~~~~~~v~~Ll~~g--a~~~-~~~~~~g~t  112 (183)
T 3deo_A           41 VSEYETPWWTAARKADEQALSQLLE-D--RDVDAV-DENGRTALLFVAG-LGSDKCVRLLAEAG--ADLD-HRDMRGGLT  112 (183)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHTT-T--SCTTCC-CTTSCCHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCSSSSCC
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHh-c--CCCCCc-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-cCCCCCCCC
Confidence            4479999999999999999999999 7  788866 8888 99999999 99999999999999  8887 777 88999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCCCcccCCCCcchHHHHHHcCccccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      |||+|+..|+.+++++|++.|++ ++.+|..|.||+++|+..++.                ..+.++++.|+..|+.+++
T Consensus       113 pL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~----------------~~~~~~l~~a~~~~~~~i~  175 (183)
T 3deo_A          113 ALHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREILKT----------------TPKGNPMQFGRRIGLEKVI  175 (183)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHHHT----------------CCCCSHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCcHHHHHHHHHcCCC-CcCCCCCCCCHHHHHHHhccC----------------cccccHHHHHHHcCHHHHH
Confidence            99999999999999999999999 599999999999999874322                3467899999988887776


Q ss_pred             cc
Q 036069          164 YS  165 (174)
Q Consensus       164 ~~  165 (174)
                      --
T Consensus       176 ~~  177 (183)
T 3deo_A          176 NV  177 (183)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.93  E-value=9.7e-27  Score=167.23  Aligned_cols=149  Identities=12%  Similarity=0.030  Sum_probs=134.1

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCcc--ccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchh-hhhhhcccCCch
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNT--LTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQN-FLQEWVSNEGNA   83 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~--~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~-~~~~~~d~~g~~   83 (174)
                      .+.+++|.|+..|+.+.++.++..+  .+  ++.. +..| ||||+|+. .|+.+++++|++.+  . +++ ..|..|.|
T Consensus        75 ~~~~~l~~a~~~~~~~~~~~l~~~~--~~~~~n~~-d~~g~T~Lh~A~~-~g~~~~v~~Ll~~g--~~~~~-~~~~~g~t  147 (276)
T 4hbd_A           75 ACRSDAHPELVRRHLVTFRAMSARL--LDYVVNIA-DSNGNTALHYSVS-HANFPVVQQLLDSG--VCKVD-KQNRAGYS  147 (276)
T ss_dssp             HHSTTCCHHHHHHHHHHHHHHCHHH--HHHHHTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTS--CCCTT-CCCTTSCC
T ss_pred             HhccCCCHHHHHHHHHHHHHHHHHH--HhhcCcCC-CCCCCCHHHHHHH-CCCHHHHHHHHHCC--CCcCC-CCCCCCCC
Confidence            3567788999999999999998876  44  6655 7888 99999999 99999999999998  6 777 88999999


Q ss_pred             HHHHHH-----hcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHc
Q 036069           84 CMVHAA-----TGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINC  157 (174)
Q Consensus        84 ~l~~A~-----~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~  157 (174)
                      |||+|+     ..++.+++++|++.+.. .+..+..|.||||+|+..|+.+++++|++.|+ .+.++..|.||||+|+..
T Consensus       148 pL~~a~~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~  226 (276)
T 4hbd_A          148 PIMLTALATLKTQDDIETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEH  226 (276)
T ss_dssp             HHHHGGGCCCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHC
Confidence            999999     66889999999999987 48889999999999999999999999999999 777999999999999999


Q ss_pred             Ccccccc
Q 036069          158 NLFGKYY  164 (174)
Q Consensus       158 ~~~~~~~  164 (174)
                      |+.+++.
T Consensus       227 g~~~iv~  233 (276)
T 4hbd_A          227 GHKEIAG  233 (276)
T ss_dssp             TCHHHHH
T ss_pred             CCHHHHH
Confidence            9988763

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.93  E-value=3.6e-26  Score=145.31  Aligned_cols=110  Identities=10%  Similarity=0.122  Sum_probs=75.2

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHH
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACM   85 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l   85 (174)
                      ..|.+|||.|+..|+.++++.|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.|||
T Consensus         5 ~~~~~~l~~A~~~~~~~~v~~ll~~~--~~~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~g--~~~~-~~d~~g~tpL   77 (123)
T 3aaa_C            5 SMCDKEFMWALKNGDLDEVKDYVAKG--EDVNRT-LEGGRKPLHYAAD-CGQLEILEFLLLKG--ADIN-APDKHHITPL   77 (123)
T ss_dssp             --CHHHHHHHHHTTCHHHHHHHHHTT--CCTTSC-CTTSSCHHHHHHH-TTCHHHHHHHHTTT--CCTT-CCCTTSCCHH
T ss_pred             cccchHHHHHHHcCCHHHHHHHHHcC--CCcCcc-CCCCCcHHHHHHH-cCCHHHHHHHHHcC--CCCC-cCCCCCCCHH
Confidence            34667777777777777777777776  666644 5556 77777777 77777777777766  6666 6667777777


Q ss_pred             HHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHh
Q 036069           86 VHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQ  124 (174)
Q Consensus        86 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~  124 (174)
                      |+|+..++.+++++|++.|++ ++.+|..|.||+++|..
T Consensus        78 ~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~  115 (123)
T 3aaa_C           78 LSAVYEGHVSCVKLLLSKGAD-KTVKGPDGLTAFEATDN  115 (123)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCC
T ss_pred             HHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHhCC
Confidence            777777777777777777766 46667777777777643

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.93  E-value=4.8e-26  Score=160.88  Aligned_cols=132  Identities=11%  Similarity=0.013  Sum_probs=116.7

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcc-cCCchH
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVS-NEGNAC   84 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d-~~g~~~   84 (174)
                      .+|.||||.|+..|+.++++.|++ +  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .++ ..|.||
T Consensus        43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~--~~~~~~-d~~g~t~L~~A~~-~g~~~~v~~Ll~~g--a~~~-~~~~~~g~t~  114 (244)
T 3ui2_A           43 SEYETPWWTAARKADEQALSQLLE-D--RDVDAV-DENGRTALLFVAG-LGSDKCVRLLAEAG--ADLD-HRDMRGGLTA  114 (244)
T ss_dssp             HHHHHHHHHHHTTTCHHHHHHTTT-T--CCTTCB-CTTSCBHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCSSSCCCH
T ss_pred             cCCCCHHHHHHHcCCHHHHHHHHc-C--CCCCCc-CCCCCCHHHHHHH-CCCHHHHHHHHHcC--CCCC-cCCCCCCCCH
Confidence            479999999999999999999999 8  888866 8888 99999999 99999999999999  8887 787 779999


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCCCcccCCCCcchHHHHHHcCccccc
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..+                ....+.|||++|+..|+.+++
T Consensus       115 L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~~----------------~~~~~~~~l~~a~~~g~~~iv  176 (244)
T 3ui2_A          115 LHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREIL----------------KTTPKGNPMQFGRRIGLEKVI  176 (244)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHH----------------TTCCCSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHHH----------------hccCCCCHHHHHHHcChHHHH
Confidence            9999999999999999999999 5999999999999998621                124568888888888776655

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.93  E-value=3.2e-26  Score=148.12  Aligned_cols=121  Identities=17%  Similarity=0.101  Sum_probs=111.8

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHH
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIH  120 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~  120 (174)
                      +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.||||+|+..++.+++++|++.+++ ++.+|..|.||||
T Consensus         7 ~~~g~t~L~~A~~-~~~~~~~~~Ll~~g--~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~   81 (137)
T 3c5r_A            7 NHRGETLLHIASI-KGDIPSVEYLLQNG--SDPN-VKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPLH   81 (137)
T ss_dssp             CTTCCCHHHHHHH-HTCHHHHHHHHHTT--CCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHHH
T ss_pred             CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHHH
Confidence            6778 99999999 99999999999998  7788 8999999999999999999999999999998 5999999999999


Q ss_pred             HHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccccccc
Q 036069          121 KAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYYSAE  167 (174)
Q Consensus       121 ~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~~  167 (174)
                      +|+..|+.+++++|+++|+ ...++..|.||+++|+..+..+++..+.
T Consensus        82 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~  129 (137)
T 3c5r_A           82 DAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPE  129 (137)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-
T ss_pred             HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcc
Confidence            9999999999999999998 7779999999999999988877775543

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.93  E-value=1.2e-25  Score=142.85  Aligned_cols=115  Identities=22%  Similarity=0.211  Sum_probs=103.9

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHH
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIH  120 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~  120 (174)
                      +..+ |+||+|+. .|+.+++++|++.+  .+++ ..|..|.||||+|+..++.+++++|++.+++ ++.+|..|+||||
T Consensus         4 ~~~~~~~l~~A~~-~~~~~~v~~ll~~~--~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~   78 (123)
T 3aaa_C            4 GSMCDKEFMWALK-NGDLDEVKDYVAKG--EDVN-RTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLL   78 (123)
T ss_dssp             ---CHHHHHHHHH-TTCHHHHHHHHHTT--CCTT-SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHH
T ss_pred             ccccchHHHHHHH-cCCHHHHHHHHHcC--CCcC-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHH
Confidence            4556 99999999 99999999999998  7788 8999999999999999999999999999999 5999999999999


Q ss_pred             HHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccc
Q 036069          121 KAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFG  161 (174)
Q Consensus       121 ~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~  161 (174)
                      +|+..|+.+++++|+++|+ .+.++..|.|||++|...+..+
T Consensus        79 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~  120 (123)
T 3aaa_C           79 SAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKA  120 (123)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred             HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHH
Confidence            9999999999999999998 7779999999999996555443

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.93  E-value=6.9e-27  Score=174.37  Aligned_cols=144  Identities=13%  Similarity=0.081  Sum_probs=119.0

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccc--cccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhh---hhhhccc
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTL--TDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNF---LQEWVSN   79 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~--~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~---~~~~~d~   79 (174)
                      +.++.||||.|+..|+.+++++|++.+  +..  ....+..+ ||||+|+. .|+.+++++|++++  ++   .+ ..+.
T Consensus        89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~g--a~~~~~~~~~~~~~tpL~~Aa~-~G~~eiv~~Ll~~g--ad~~~~~-i~~~  162 (376)
T 2aja_A           89 GIKSEVICFVAAITGCSSALDTLCLLL--TSDEIVKVIQAENYQAFRLAAE-NGHLHVLNRLCELA--PTEIMAM-IQAE  162 (376)
T ss_dssp             TCCHHHHHHHHHHHCCHHHHHHHTTC----CCSSCC--CHHHHHHHHHHHH-TTCHHHHHHHHHSC--TTTHHHH-HSHH
T ss_pred             CCCcCCHHHHHHHcCCHHHHHHHHHcC--CcHHHHHHhccCCCCHHHHHHH-cCCHHHHHHHHhCC--CCccccc-cCCC
Confidence            346789999999999999999999998  411  11224456 99999999 99999999999998  43   23 3333


Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHhCCCCCCC--CCCCCccHHHHHH-hcCChHHHHHHHhcCCCcccCCCCcchHHHHHH
Q 036069           80 EGNACMVHAATGGKSKLIEILMRYNPNLPNV--RDKSKLLPIHKAA-QLGHRDTVRYLLSKTTAHLDGHDWSTLLKDLIN  156 (174)
Q Consensus        80 ~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~--~~~~~~tpl~~a~-~~~~~~~~~~ll~~~~~~~~~~~g~t~l~~a~~  156 (174)
                      + .||||+|+..|+.+++++|++.|++ ++.  .|..|.||||+|+ ..|+.+++++|++.|+      .|.|||+.|+.
T Consensus       163 ~-~TpLh~Aa~~G~~eiv~~Ll~~ga~-~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga------~~~taL~~Aa~  234 (376)
T 2aja_A          163 N-YHAFRLAAENGHLHVLNRLCELAPT-EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV------MLAYAEIHEFE  234 (376)
T ss_dssp             H-HHHHHHHHHTTCHHHHHHHHHSCGG-GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH------HHHHHHHCTTT
T ss_pred             C-CCHHHHHHHCCCHHHHHHHHHcCCc-cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC------ccchHHHHHHH
Confidence            3 8999999999999999999999988 365  7888999999999 9999999999999663      37899999999


Q ss_pred             cCccccc
Q 036069          157 CNLFGKY  163 (174)
Q Consensus       157 ~~~~~~~  163 (174)
                      .|+.+++
T Consensus       235 ~g~~evv  241 (376)
T 2aja_A          235 YGEKYVN  241 (376)
T ss_dssp             TTTTTHH
T ss_pred             CCCHHHH
Confidence            9998865

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.92  E-value=6.1e-26  Score=154.23  Aligned_cols=126  Identities=8%  Similarity=-0.031  Sum_probs=113.5

Q ss_pred             cchhhHHHHHHHHhCCH----HHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCC------HHHHHHHHhccchhhhh
Q 036069            6 DIDSVMQVTRYILKNDW----KDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAP------PMFLDKLVSKVHQNFLQ   74 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~----~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~------~~~v~~Ll~~~~~~~~~   74 (174)
                      +..|.||||.|+..|+.    +++++|++.|  ++++.+ +..| ||||+|+. .++      .+++++|++.+  ++++
T Consensus        35 ~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G--advn~~-d~~g~TpLh~a~~-~~~~~~~~~~~iv~~Ll~~G--adin  108 (186)
T 3t8k_A           35 SVLKSNILYDVLRNNNDEARYKISMFLINKG--ADIKSR-TKEGTTLFFPLFQ-GGGNDITGTTELCKIFLEKG--ADIT  108 (186)
T ss_dssp             HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTT--CCSSCC-CTTCCCTHHHHHH-HCTTCHHHHHHHHHHHHHTT--CCSS
T ss_pred             ccCCCCHHHHHHHcCCcchHHHHHHHHHHCC--CCCCCC-CCCCCcHHHHHHH-cCCcchhhHHHHHHHHHHCC--CCCC
Confidence            36799999999999985    4899999999  999977 8888 99999999 886      58899999999  9999


Q ss_pred             hhcccCCc-hHHHHHHhcC-----CHHHHHHHHH-hCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           75 EWVSNEGN-ACMVHAATGG-----KSKLIEILMR-YNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        75 ~~~d~~g~-~~l~~A~~~~-----~~~~~~~Ll~-~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                       .+|..|. ||||+|+..+     +.+++++|++ .|++ ++.+|..|.|||++|+..|+.+++++|.++..
T Consensus       109 -~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad-~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~  178 (186)
T 3t8k_A          109 -ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ-LLIKDKWGLTALEFVKRCQKPIALKMMEDYIK  178 (186)
T ss_dssp             -SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC-TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred             -ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence             9999999 9999999854     3568999999 8999 59999999999999999999999999987654

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.92  E-value=7.7e-25  Score=139.11  Aligned_cols=115  Identities=18%  Similarity=0.207  Sum_probs=108.1

Q ss_pred             c-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHH
Q 036069           45 L-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAA  123 (174)
Q Consensus        45 ~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~  123 (174)
                      | ||||+|+. .|+.+++++|++.+  .+++ ..|..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|+
T Consensus         2 g~t~L~~A~~-~~~~~~v~~Ll~~~--~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~   76 (126)
T 1n0r_A            2 GRTPLHLAAR-NGHLEVVKLLLEAG--ADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAA   76 (126)
T ss_dssp             CCCHHHHHHH-HTCHHHHHHHHHHT--CCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHH
T ss_pred             CccHHHHHHH-cCcHHHHHHHHHcC--CCCC-CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHHH
Confidence            5 99999999 99999999999998  7777 8899999999999999999999999999998 5999999999999999


Q ss_pred             hcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          124 QLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       124 ~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      ..|+.+++++|+++|+ .+.++..|.|||+.|+..|+.+++.
T Consensus        77 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~  118 (126)
T 1n0r_A           77 RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVK  118 (126)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             HcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHH
Confidence            9999999999999998 6778899999999999999988764

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.92  E-value=1.1e-24  Score=162.01  Aligned_cols=144  Identities=11%  Similarity=0.055  Sum_probs=117.5

Q ss_pred             cchhhHHHHHHHHh-CCHHHHHHHHHcCCCcccccccc--CCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCC
Q 036069            6 DIDSVMQVTRYILK-NDWKDLEEYIMSKTSNTLTDKIT--GGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEG   81 (174)
Q Consensus         6 ~~~~~~~L~~A~~~-g~~~~~~~ll~~~~~~~~~~~~~--~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g   81 (174)
                      +..+.++||.|+.. |+.++++.|++.|  ++++.. +  ..| ||||+|+. .|+.+++++|++.+  ++++ ..|..|
T Consensus       196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~G--advn~~-~~~~~g~TpLh~Aa~-~g~~~iv~~LL~~G--advn-~~d~~G  268 (368)
T 3jue_A          196 SLHPGALLFRASGHPPSLPTMADALAHG--ADVNWV-NGGQDNATPLIQATA-ANSLLACEFLLQNG--ANVN-QADSAG  268 (368)
T ss_dssp             -CCHHHHHHHHTSSSCCHHHHHHHHHTT--CCTTCC-CTTTTCCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTS
T ss_pred             cCCCCcHHHHHHHccCCHHHHHHHHHcC--CCCCcc-ccccCCCCHHHHHHH-CCCHHHHHHHHHcC--CCCC-CCCCCC
Confidence            44577899999999 9999999999999  899866 5  667 99999999 99999999999999  8888 999999


Q ss_pred             chHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCCCc----ccCCCCcchHHHHHHc
Q 036069           82 NACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAH----LDGHDWSTLLKDLINC  157 (174)
Q Consensus        82 ~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~~~----~~~~~g~t~l~~a~~~  157 (174)
                      .||||+|+..|+.+++++|++.|++ ++.+|..|.|||++|+..|+.+++++|+..+...    ..+..+.|++.++...
T Consensus       269 ~TpLh~A~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~  347 (368)
T 3jue_A          269 RGPLHHATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF  347 (368)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred             CCHHHHHHHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence            9999999999999999999999999 5999999999999999999999999999887621    2556778887766543

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.92  E-value=9.8e-26  Score=165.59  Aligned_cols=146  Identities=15%  Similarity=0.090  Sum_probs=125.0

Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHh
Q 036069           12 QVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAAT   90 (174)
Q Consensus        12 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~   90 (174)
                      .+|.|+..+..++++.|++.+  .+++...+..| ||||+|+. .|+.+++++|++.+  ++++ .+|..|.||||+|+.
T Consensus       100 ~~~~a~~~~~~~~~~~l~~~g--~dvn~~~d~~g~TpLh~Aa~-~g~~~~v~~Ll~~G--ad~n-~~d~~g~TpLh~A~~  173 (327)
T 1sw6_A          100 QQHVSFDSLLQEVNDAFPNTQ--LNLNIPVDEHGNTPLHWLTS-IANLELVKHLVKHG--SNRL-YGDNMGESCLVKAVK  173 (327)
T ss_dssp             ----CHHHHHHHHHHHCTTSC--CCSCSCCSTTCCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-BCCTTCCCHHHHHHH
T ss_pred             hhHHHHHhhHHHHHHHHHhcC--CCcccccCCCCCcHHHHHHH-cCCHHHHHHHHHcC--CCCC-CcCCCCCCHHHHHHH
Confidence            357788888888999999998  99997348888 99999999 99999999999999  8888 999999999999999


Q ss_pred             cCC---HHHHHHHHHhC-CCCCCCCCCCCccHHHHHHh----cCChHHHHHHHhcCC-----------------------
Q 036069           91 GGK---SKLIEILMRYN-PNLPNVRDKSKLLPIHKAAQ----LGHRDTVRYLLSKTT-----------------------  139 (174)
Q Consensus        91 ~~~---~~~~~~Ll~~~-~~~~~~~~~~~~tpl~~a~~----~~~~~~~~~ll~~~~-----------------------  139 (174)
                      .|+   .++++.|++.+ .+ ++.+|..|+||||+|+.    .|+.+++++|++.+.                       
T Consensus       174 ~g~~~~~~~~~~ll~~~~~~-~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~  252 (327)
T 1sw6_A          174 SVNNYDSGTFEALLDYLYPC-LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN  252 (327)
T ss_dssp             SSHHHHTTCHHHHHHHHGGG-GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------
T ss_pred             hcccccHHHHHHHHHhhhcc-ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcc
Confidence            998   67788888876 44 58899999999999999    899999999988742                       


Q ss_pred             -----------------------CcccCCCCcchHHHHHHcCcccccc
Q 036069          140 -----------------------AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       140 -----------------------~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                                             .+.++..|.||||+|+..|+.+++.
T Consensus       253 ~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~  300 (327)
T 1sw6_A          253 DKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVD  300 (327)
T ss_dssp             -------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred             cccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence                                   3347789999999999999988774

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.92  E-value=4.7e-25  Score=154.48  Aligned_cols=133  Identities=13%  Similarity=0.071  Sum_probs=109.8

Q ss_pred             HHHHHHcCCCcccccc--ccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHH
Q 036069           25 LEEYIMSKTSNTLTDK--ITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILM  101 (174)
Q Consensus        25 ~~~ll~~~~~~~~~~~--~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll  101 (174)
                      ++.|++++  .+++..  .+..+ |+||+|+. .|+.+++++|++.+  .+++ ..|..|.||||+|+..|+.+++++|+
T Consensus         1 v~~ll~~~--~~~~~~~~~~~~~~t~L~~A~~-~g~~~~v~~Ll~~g--~~~~-~~d~~g~tpLh~A~~~g~~~~v~~Ll   74 (229)
T 2vge_A            1 MRSVLRKA--GSPRKARRARLNPLVLLLDAAL-TGELEVVQQAVKEM--NDPS-QPNEEGITALHNAICGANYSIVDFLI   74 (229)
T ss_dssp             -----------CCCCCCCTTSCHHHHHHHHHH-HTCHHHHHHHHHHS--SCTT-CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             CeehhccC--CCCccccccccchhHHHHHHHH-cCCHHHHHHHHhcC--CCCC-CCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            35677777  555433  23345 89999999 99999999999998  7888 89999999999999999999999999


Q ss_pred             HhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-Cccc-CCCCcchHHHH--HHcCcccccc
Q 036069          102 RYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLD-GHDWSTLLKDL--INCNLFGKYY  164 (174)
Q Consensus       102 ~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~-~~~g~t~l~~a--~~~~~~~~~~  164 (174)
                      +.|++ ++.+|..|+||||+|+..|+.+++++|++.|+ .+.. +..|.|||++|  +..|+.+++.
T Consensus        75 ~~ga~-~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~  140 (229)
T 2vge_A           75 TAGAN-VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCAT  140 (229)
T ss_dssp             HTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHH
T ss_pred             HCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHH
Confidence            99999 59999999999999999999999999999998 5555 46999999999  8888877653

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.92  E-value=4.2e-25  Score=145.90  Aligned_cols=118  Identities=14%  Similarity=0.045  Sum_probs=108.8

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCcc-HH
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLL-PI  119 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t-pl  119 (174)
                      +..+ ||||+|+. .|+.+++++|++.+  .+++ ..|..|.||||+|+ .|+.+++++|++.|++ ++.+|..|.| ||
T Consensus         9 ~~~~~t~L~~A~~-~g~~~~v~~Ll~~g--~~~~-~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g~ttpL   82 (156)
T 1bi7_B            9 MEPSADWLATAAA-RGRVEEVRALLEAG--ANPN-APNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRPV   82 (156)
T ss_dssp             -CCSTTHHHHHHH-HTCHHHHHHHHTTT--CCTT-CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCHH
T ss_pred             CccchHHHHHHHH-cCCHHHHHHHHHcC--CCCC-CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCCCcHHH
Confidence            5566 99999999 99999999999998  7888 89999999999985 8999999999999998 5999999999 99


Q ss_pred             HHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccccc
Q 036069          120 HKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYYS  165 (174)
Q Consensus       120 ~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~  165 (174)
                      |+|+..|+.+++++|+++|+ .+.++..|.|||++|+..|+.+++..
T Consensus        83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~  129 (156)
T 1bi7_B           83 HDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY  129 (156)
T ss_dssp             HHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred             HHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHH
Confidence            99999999999999999998 77789999999999999999887743

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.92  E-value=4.2e-24  Score=153.67  Aligned_cols=125  Identities=17%  Similarity=0.201  Sum_probs=114.9

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccc-----cCCc-cHHHHHHhhC---CCHHHHHHHHhccchhhhhhhcc
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKI-----TGGL-SIFDLIVNSD---APPMFLDKLVSKVHQNFLQEWVS   78 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~-----~~~~-t~L~~A~~~~---g~~~~v~~Ll~~~~~~~~~~~~d   78 (174)
                      ...++|+.|+..|+.+.++.+++.|  .+++...     +..| ||||+|+. .   |+.+++++|++.+  ++++ .+|
T Consensus       129 ~~l~~l~~a~~~~d~~~~~~ll~~g--~~~~~~~~l~~~~~~g~t~Lh~A~~-~~~~~~~~~v~~Ll~~g--a~in-~~d  202 (278)
T 1dcq_A          129 AKLHSLCEAVKTRDIFGLLQAYADG--VDLTEKIPLANGHEPDETALHLAVR-SVDRTSLHIVDFLVQNS--GNLD-KQT  202 (278)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTT--CCTTSBCCCSSCSSTTCBHHHHHHH-HCCTTTHHHHHHHHHHC--SCTT-CCC
T ss_pred             hhhhhhhhHhhhcccHHHHHHHHhh--cchhhhccccccccCCCCcchHHHH-hcccchHHHHHHHHHCC--CCcc-ccC
Confidence            4578999999999999999999999  6654332     5667 99999999 8   8999999999999  8888 999


Q ss_pred             cCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           79 NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        79 ~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      ..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus       203 ~~g~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga  262 (278)
T 1dcq_A          203 GKGSTALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALS  262 (278)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            9999999999999999999999999999 59999999999999999999999999999987

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*

Probab=99.91  E-value=7.7e-24  Score=163.43  Aligned_cols=124  Identities=13%  Similarity=0.134  Sum_probs=114.7

Q ss_pred             hhHHHHHHHHhCCHHHHHHHHHcCCCcccccc-----ccCCc-cHHHHH---HhhCCCHHHHHHHHhccchhhhhhhccc
Q 036069            9 SVMQVTRYILKNDWKDLEEYIMSKTSNTLTDK-----ITGGL-SIFDLI---VNSDAPPMFLDKLVSKVHQNFLQEWVSN   79 (174)
Q Consensus         9 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~-----~~~~~-t~L~~A---~~~~g~~~~v~~Ll~~~~~~~~~~~~d~   79 (174)
                      ..+.|+.|+..|+.+.++.|++.|  ++++..     .+..| ||||+|   +. .|+.+++++|++.+  ++++ .+|.
T Consensus       132 ~~~~L~~A~~~g~~~~v~~ll~~g--~~~n~~~~~~~~~~~g~t~Lh~A~~~a~-~g~~~~v~~Ll~~g--a~vn-~~d~  205 (497)
T 3lvq_E          132 EPQRLWTAICNRDLLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVAN-QASLPLVDFIIQNG--GHLD-AKAA  205 (497)
T ss_dssp             CHHHHHHHHHHTCHHHHHHHHHTT--CCSSSCBCCSSSCCSCBCHHHHHHHTCC-TTTHHHHHHHHHHS--CCTT-CCCS
T ss_pred             cHHHHHHHHhccCHHHHHHHHhhc--ccccCCCCCcccccccchHHHHHHHhcc-cccHHHHHHHHHcC--CCCC-ccCC
Confidence            347799999999999999999999  887744     25567 999999   56 78999999999999  8899 9999


Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           80 EGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        80 ~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      .|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.|+
T Consensus       206 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga  264 (497)
T 3lvq_E          206 DGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQA  264 (497)
T ss_dssp             SSCCHHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence            999999999999999999999999999 59999999999999999999999999999998

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.91  E-value=2.5e-24  Score=145.74  Aligned_cols=116  Identities=16%  Similarity=0.134  Sum_probs=106.5

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCC-CCCccHH
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRD-KSKLLPI  119 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~tpl  119 (174)
                      +..| ||||+|+. .|+.++++.|++ +  .+++ .+|..|.||||+|+..|+.+++++|++.|++ ++.++ ..|+|||
T Consensus        41 ~~~g~t~L~~A~~-~g~~~~v~~Ll~-~--~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tpL  114 (183)
T 3deo_A           41 VSEYETPWWTAAR-KADEQALSQLLE-D--RDVD-AVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTAL  114 (183)
T ss_dssp             HHHHHHHHHHHHH-TTCHHHHHHHTT-T--SCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCCHH
T ss_pred             CCCCCCHHHHHHH-cCCHHHHHHHHh-c--CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCCHH
Confidence            3467 99999999 999999999999 7  7788 8999999999999999999999999999999 58777 8899999


Q ss_pred             HHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069          120 HKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       120 ~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      |+|+..|+.+++++|+++|+ .+.++..|.|||++|+..++.+.+
T Consensus       115 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~  159 (183)
T 3deo_A          115 HMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPK  159 (183)
T ss_dssp             HHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCC
T ss_pred             HHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCccc
Confidence            99999999999999999998 777999999999999998776554

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.91  E-value=1.4e-24  Score=151.15  Aligned_cols=121  Identities=17%  Similarity=0.195  Sum_probs=110.1

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHh-CCCCCCCCCCCCccHH
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRY-NPNLPNVRDKSKLLPI  119 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~tpl  119 (174)
                      +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.||||+|+..|+.+++++|++. +++ ++.+|..|.|||
T Consensus        70 ~~~g~t~L~~A~~-~g~~~~v~~Ll~~g--~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~tpL  144 (222)
T 3ehr_A           70 AESIDNPLHEAAK-RGNLSWLRECLDNR--VGVN-GLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDTAL  144 (222)
T ss_dssp             EEEESCHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCCHH
T ss_pred             ccccccccccccc-cCcHHHHHHHHhCC--CCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCCHH
Confidence            3456 99999999 99999999999998  8888 8999999999999999999999999998 887 599999999999


Q ss_pred             HHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccccccc
Q 036069          120 HKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYYSAE  167 (174)
Q Consensus       120 ~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~~  167 (174)
                      |+|+..|+.+++++|+++|+ .+.++..|.|||++|+..|+.+++..+.
T Consensus       145 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~  193 (222)
T 3ehr_A          145 HAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQ  193 (222)
T ss_dssp             HHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHh
Confidence            99999999999999999999 7789999999999999999888876543

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.90  E-value=3.9e-23  Score=125.03  Aligned_cols=89  Identities=21%  Similarity=0.316  Sum_probs=64.7

Q ss_pred             cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhc
Q 036069           46 SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQL  125 (174)
Q Consensus        46 t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~  125 (174)
                      ||||+|+. .|+.+++++|++.+  .+++ .+|..|.||||+|+..++.+++++|++.|++ ++.+|..|.||+|+|+..
T Consensus         4 t~L~~A~~-~~~~~~v~~Ll~~g--~~~n-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~   78 (93)
T 1n0q_A            4 TPLHLAAR-NGHLEVVKLLLEAG--ADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARN   78 (93)
T ss_dssp             CHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHT
T ss_pred             cHHHHHHH-cCCHHHHHHHHHcC--CCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHc
Confidence            67777777 77777777777776  6666 6777777777777777777777777777776 477777777777777777


Q ss_pred             CChHHHHHHHhcCC
Q 036069          126 GHRDTVRYLLSKTT  139 (174)
Q Consensus       126 ~~~~~~~~ll~~~~  139 (174)
                      |+.+++++|+++|+
T Consensus        79 ~~~~~~~~Ll~~ga   92 (93)
T 1n0q_A           79 GHLEVVKLLLEAGA   92 (93)
T ss_dssp             TCHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHcCC
Confidence            77777777776654

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.89  E-value=8.7e-23  Score=123.47  Aligned_cols=92  Identities=9%  Similarity=0.079  Sum_probs=85.4

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHH
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMV   86 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~   86 (174)
                      +|.||||.|+..|+.+++++|++.+  ++++.+ +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.||||
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~n~~-d~~g~t~L~~A~~-~~~~~~v~~Ll~~g--a~~~-~~d~~g~t~l~   73 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAG--ADVNAK-DKNGRTPLHLAAR-NGHLEVVKLLLEAG--ADVN-AKDKNGRTPLH   73 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTSCCHHH
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcC--CCCccc-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-ccCCCCCCHHH
Confidence            4889999999999999999999999  899876 8888 99999999 99999999999999  8888 99999999999


Q ss_pred             HHHhcCCHHHHHHHHHhCCC
Q 036069           87 HAATGGKSKLIEILMRYNPN  106 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~~~  106 (174)
                      +|+..|+.+++++|++.|++
T Consensus        74 ~A~~~~~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           74 LAARNGHLEVVKLLLEAGAY   93 (93)
T ss_dssp             HHHHTTCHHHHHHHHHTTCC
T ss_pred             HHHHcCCHHHHHHHHHcCCC
Confidence            99999999999999998863

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.89  E-value=6.6e-23  Score=144.78  Aligned_cols=112  Identities=17%  Similarity=0.156  Sum_probs=103.3

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCC-CCCccHH
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRD-KSKLLPI  119 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~tpl  119 (174)
                      +..| ||||+|+. .|+.++++.|++ +  .+++ .+|..|.||||+|+..|+.+++++|++.|++ ++.++ ..|.|||
T Consensus        42 ~~~g~t~L~~A~~-~g~~~~v~~Ll~-~--~~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t~L  115 (244)
T 3ui2_A           42 VSEYETPWWTAAR-KADEQALSQLLE-D--RDVD-AVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTAL  115 (244)
T ss_dssp             HHHHHHHHHHHHT-TTCHHHHHHTTT-T--CCTT-CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCCHH
T ss_pred             ccCCCCHHHHHHH-cCCHHHHHHHHc-C--CCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCCHH
Confidence            3457 99999999 999999999999 7  7788 8999999999999999999999999999999 58777 7899999


Q ss_pred             HHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCc
Q 036069          120 HKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNL  159 (174)
Q Consensus       120 ~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~  159 (174)
                      |+|+..|+.+++++|+++|+ .+.++..|.||||+|+..+.
T Consensus       116 ~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~  156 (244)
T 3ui2_A          116 HMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK  156 (244)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT
T ss_pred             HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh
Confidence            99999999999999999998 77799999999999997654

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.88  E-value=4.4e-23  Score=129.44  Aligned_cols=104  Identities=22%  Similarity=0.247  Sum_probs=52.6

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHH
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIH  120 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~  120 (174)
                      +..| ||||+|+. .|+.+++++|++.+  .+++ ..|..|.||||+|+..++.+++++|++.+++ ++.+|..|.|||+
T Consensus         6 d~~g~t~L~~A~~-~~~~~~~~~Ll~~g--~~~~-~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tpl~   80 (115)
T 2l6b_A            6 SKDGNTPLHNAAK-NGHAEEVKKLLSKG--ADVN-ARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTPEH   80 (115)
T ss_dssp             SCSSCCHHHHHHH-HTCHHHHHHHTTTT--CCSS-CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCTTH
T ss_pred             CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCHHH
Confidence            3344 55555555 55555555555554  4444 4455555555555555555555555555554 2555555555555


Q ss_pred             HHHhcCChHHHHHHHhcCC-CcccCCCCcch
Q 036069          121 KAAQLGHRDTVRYLLSKTT-AHLDGHDWSTL  150 (174)
Q Consensus       121 ~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~  150 (174)
                      +|+..|+.+++++|+++|+ .+.++..|.+|
T Consensus        81 ~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~  111 (115)
T 2l6b_A           81 LAKKNGHHEIVKLLDAKGADVNARSWGSSHH  111 (115)
T ss_dssp             HHHTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred             HHHHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence            5555555555555555555 33344444443

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.87  E-value=5e-24  Score=158.97  Aligned_cols=140  Identities=11%  Similarity=0.039  Sum_probs=114.9

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccc-cccCC-ccHHHHHHhhCCCHHHHHHHHhccchhhhhhh--cccCC
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTD-KITGG-LSIFDLIVNSDAPPMFLDKLVSKVHQNFLQEW--VSNEG   81 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~-~~~~~-~t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~--~d~~g   81 (174)
                      +..+.+|||.|+..|+.+++++|++.|  +++.. ..+.. .||||+|+. .|+.+++++|++++  +++. .  .|..|
T Consensus       125 ~~~~~tpL~~Aa~~G~~eiv~~Ll~~g--ad~~~~~i~~~~~TpLh~Aa~-~G~~eiv~~Ll~~g--a~~~-~~~~d~~g  198 (376)
T 2aja_A          125 QAENYQAFRLAAENGHLHVLNRLCELA--PTEIMAMIQAENYHAFRLAAE-NGHLHVLNRLCELA--PTEA-TAMIQAEN  198 (376)
T ss_dssp             CHHHHHHHHHHHHTTCHHHHHHHHHSC--TTTHHHHHSHHHHHHHHHHHH-TTCHHHHHHHHHSC--GGGH-HHHHHHHH
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHhCC--CCccccccCCCCCCHHHHHHH-CCCHHHHHHHHHcC--Cccc-hhccCCCC
Confidence            457899999999999999999999999  54211 11222 399999999 99999999999999  7766 6  78889


Q ss_pred             chHHHHHH-hcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCc
Q 036069           82 NACMVHAA-TGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNL  159 (174)
Q Consensus        82 ~~~l~~A~-~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~  159 (174)
                      .||||+|+ ..|+.+++++|++.|+        .|.||+++|+..|+.+++++|++.|+ ....    .++++.|+..|+
T Consensus       199 ~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~----~~~l~~A~~~g~  266 (376)
T 2aja_A          199 YYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEM----HDAFKLSNPDGV  266 (376)
T ss_dssp             HHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHH----HTTTTTTSSSSC
T ss_pred             CCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCcccccc----cHHHHHHHHCCC
Confidence            99999999 9999999999998653        27899999999999999999999887 3322    235666677777


Q ss_pred             cccc
Q 036069          160 FGKY  163 (174)
Q Consensus       160 ~~~~  163 (174)
                      .+++
T Consensus       267 ~~vv  270 (376)
T 2aja_A          267 FDLV  270 (376)
T ss_dssp             CCCS
T ss_pred             hhhh
Confidence            6655

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.87  E-value=1.8e-22  Score=126.57  Aligned_cols=109  Identities=11%  Similarity=0.111  Sum_probs=98.8

Q ss_pred             ccccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCC
Q 036069            3 IITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEG   81 (174)
Q Consensus         3 ~~~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g   81 (174)
                      .+.|.+|.||||.|+..|+.++++.|++.+  .+++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|
T Consensus         3 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~~~~-d~~g~t~L~~A~~-~~~~~~~~~Ll~~g--~~~~-~~d~~g   75 (115)
T 2l6b_A            3 MWGSKDGNTPLHNAAKNGHAEEVKKLLSKG--ADVNAR-SKDGNTPLHLAAK-NGHAEIVKLLLAKG--ADVN-ARSKDG   75 (115)
T ss_dssp             -CCSCSSCCHHHHHHHHTCHHHHHHHTTTT--CCSSCC-CSSSCCTTHHHHT-TTCHHHHHHHTTTT--CCTT-CCCTTC
T ss_pred             cccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCc-CCCCCCHHHHHHH-cCcHHHHHHHHHcC--CCCc-ccCCCC
Confidence            467889999999999999999999999999  888866 7888 99999999 99999999999998  8888 899999


Q ss_pred             chHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHH
Q 036069           82 NACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPI  119 (174)
Q Consensus        82 ~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl  119 (174)
                      .||||+|+..++.+++++|++.|++ ++.++..|.+|-
T Consensus        76 ~tpl~~A~~~~~~~~~~~Ll~~ga~-~n~~~~~~~~~~  112 (115)
T 2l6b_A           76 NTPEHLAKKNGHHEIVKLLDAKGAD-VNARSWGSSHHH  112 (115)
T ss_dssp             CCTTHHHHTTTCHHHHHHHHTTSSS-HHHHSCCCC---
T ss_pred             CCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCccccccc
Confidence            9999999999999999999999999 598898888874

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.87  E-value=8.1e-22  Score=146.62  Aligned_cols=114  Identities=14%  Similarity=0.158  Sum_probs=107.3

Q ss_pred             cHHHHHHhhC-CCHHHHHHHHhccchhhhhhhcc--cCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHH
Q 036069           46 SIFDLIVNSD-APPMFLDKLVSKVHQNFLQEWVS--NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKA  122 (174)
Q Consensus        46 t~L~~A~~~~-g~~~~v~~Ll~~~~~~~~~~~~d--~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a  122 (174)
                      ++||.|+. . |+.++++.|++.+  .+++ ..+  ..|.||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|
T Consensus       201 t~L~~Aa~-~~g~~~~v~~LL~~G--advn-~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpLh~A  275 (368)
T 3jue_A          201 ALLFRASG-HPPSLPTMADALAHG--ADVN-WVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRGPLHHA  275 (368)
T ss_dssp             HHHHHHTS-SSCCHHHHHHHHHTT--CCTT-CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHH
T ss_pred             cHHHHHHH-ccCCHHHHHHHHHcC--CCCC-ccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHH
Confidence            79999999 9 9999999999999  7787 777  7899999999999999999999999999 599999999999999


Q ss_pred             HhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          123 AQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       123 ~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      +..|+.+++++|+++|+ .+..+..|.|||++|+..|+.+++.
T Consensus       276 ~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~  318 (368)
T 3jue_A          276 TILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVT  318 (368)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             HHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHH
Confidence            99999999999999999 7779999999999999999988763

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.86  E-value=2.9e-21  Score=138.88  Aligned_cols=154  Identities=9%  Similarity=-0.064  Sum_probs=124.0

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCc----ccccc------------------c-------cCCc-cHHHHHHhh
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSN----TLTDK------------------I-------TGGL-SIFDLIVNS   54 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~----~~~~~------------------~-------~~~~-t~L~~A~~~   54 (174)
                      .|..+.++++.+...|+....+.+...- +.    .+...                  .       .... ++|+.|+. 
T Consensus        62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l-~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~-  139 (278)
T 1dcq_A           62 LDVLGTSELLLAKNIGNAGFNEIMECCL-PSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVK-  139 (278)
T ss_dssp             TSCCCGGGGHHHHHSCHHHHHHHHTTTC-CSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHH-
T ss_pred             cCCCCHHHHHHHHHcCcHHHHHHHHhhC-ChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhh-
Confidence            4567888999998888876655443221 10    11100                  0       0012 57899999 


Q ss_pred             CCCHHHHHHHHhccchhh------hhhhcccCCchHHHHHHhc---CCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhc
Q 036069           55 DAPPMFLDKLVSKVHQNF------LQEWVSNEGNACMVHAATG---GKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQL  125 (174)
Q Consensus        55 ~g~~~~v~~Ll~~~~~~~------~~~~~d~~g~~~l~~A~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~  125 (174)
                      .|+.+.++.+++.+  .+      ++ ..|..|.||||+|+..   ++.+++++|++.|++ ++.+|..|.||||+|+..
T Consensus       140 ~~d~~~~~~ll~~g--~~~~~~~~l~-~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~TpLh~A~~~  215 (278)
T 1dcq_A          140 TRDIFGLLQAYADG--VDLTEKIPLA-NGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTALHYCCLT  215 (278)
T ss_dssp             TTCHHHHHHHHHTT--CCTTSBCCCS-SCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHHHHHHHT
T ss_pred             hcccHHHHHHHHhh--cchhhhcccc-ccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCHHHHHHHc
Confidence            99999999999988  44      33 4578899999999999   899999999999999 599999999999999999


Q ss_pred             CChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          126 GHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       126 ~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      |+.+++++|+++|+ .+.++..|.||||+|+..|+.+++.
T Consensus       216 g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~  255 (278)
T 1dcq_A          216 DNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEE  255 (278)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             CCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHH
Confidence            99999999999999 7789999999999999999988763

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.86  E-value=2.8e-21  Score=140.40  Aligned_cols=114  Identities=9%  Similarity=-0.018  Sum_probs=105.0

Q ss_pred             cHHHHHHhhCCCHHHHHHHHhccchhhhhhh------cccCCchHHHHHHhc---CCHHHHHHHHHhCCCCCCCCCCCCc
Q 036069           46 SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEW------VSNEGNACMVHAATG---GKSKLIEILMRYNPNLPNVRDKSKL  116 (174)
Q Consensus        46 t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~------~d~~g~~~l~~A~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~  116 (174)
                      ++|+.|+. .|+.+.++.|++.+  .+++ .      .+..|.||||+|+..   ++.+++++|++.|++ ++.+|..|.
T Consensus       153 ~~L~~A~~-~g~~~~v~~ll~~g--~d~~-~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~G~  227 (301)
T 2b0o_E          153 QRLWTAIC-NRDLLSVLEAFANG--QDFG-QPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGN  227 (301)
T ss_dssp             HHHHHHHH-TTCHHHHHHHHHTT--CCTT-SCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTTCC
T ss_pred             HHHhhhhh-ccCHHHHHHHHhcC--Cccc-ccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCCCC
Confidence            56999999 99999999999988  6666 5      588899999999987   899999999999999 599999999


Q ss_pred             cHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          117 LPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       117 tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      ||||+|+..|+.+++++|+++|+ .+.++..|.|||++|+..|+.+++.
T Consensus       228 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~  276 (301)
T 2b0o_E          228 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE  276 (301)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence            99999999999999999999999 7779999999999999999988763

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*

Probab=99.85  E-value=2.9e-21  Score=149.03  Aligned_cols=114  Identities=9%  Similarity=-0.017  Sum_probs=105.4

Q ss_pred             cHHHHHHhhCCCHHHHHHHHhccchhhhhhhc------ccCCchHHHHHHh---cCCHHHHHHHHHhCCCCCCCCCCCCc
Q 036069           46 SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWV------SNEGNACMVHAAT---GGKSKLIEILMRYNPNLPNVRDKSKL  116 (174)
Q Consensus        46 t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~------d~~g~~~l~~A~~---~~~~~~~~~Ll~~~~~~~~~~~~~~~  116 (174)
                      +.||.|+. .|+.+.++.|++.+  .+++ ..      |..|.||||+|+.   .|+.+++++|++.|++ ++.+|..|+
T Consensus       134 ~~L~~A~~-~g~~~~v~~ll~~g--~~~n-~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g~  208 (497)
T 3lvq_E          134 QRLWTAIC-NRDLLSVLEAFANG--QDFG-QPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGN  208 (497)
T ss_dssp             HHHHHHHH-HTCHHHHHHHHHTT--CCSS-SCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSSC
T ss_pred             HHHHHHHh-ccCHHHHHHHHhhc--cccc-CCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCCC
Confidence            67999999 99999999999999  6666 55      7789999999966   8999999999999999 599999999


Q ss_pred             cHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          117 LPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       117 tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      ||||+|+..|+.+++++|+++|+ .+.++..|.||||+|+..|+.+++.
T Consensus       209 TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~  257 (497)
T 3lvq_E          209 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEE  257 (497)
T ss_dssp             CHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence            99999999999999999999999 7789999999999999999988763

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.83  E-value=3.8e-20  Score=115.22  Aligned_cols=88  Identities=14%  Similarity=0.120  Sum_probs=72.3

Q ss_pred             cCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHH
Q 036069           42 TGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIH  120 (174)
Q Consensus        42 ~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~  120 (174)
                      +..+ |+||+|+. .|+.+++++|++.+  .+++ .+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||++
T Consensus        21 ~~~g~t~L~~A~~-~g~~~~v~~Ll~~g--~~i~-~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~   95 (110)
T 2zgd_A           21 GSDLGKKLLEAAR-AGQDDEVRILMANG--ADVA-AKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKTAFD   95 (110)
T ss_dssp             -CCHHHHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred             CCccchHHHHHHH-cCCHHHHHHHHHcC--CCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCcHHH
Confidence            5566 88888888 88888888888887  7777 7888888888888888888888888888887 4888888888888


Q ss_pred             HHHhcCChHHHHHH
Q 036069          121 KAAQLGHRDTVRYL  134 (174)
Q Consensus       121 ~a~~~~~~~~~~~l  134 (174)
                      +|+..|+.+++++|
T Consensus        96 ~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           96 ISIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHHTCHHHHHHH
T ss_pred             HHHHcCCHHHHHHh
Confidence            88888888888776

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.81  E-value=2.1e-19  Score=111.84  Aligned_cols=89  Identities=11%  Similarity=0.060  Sum_probs=82.3

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+.+|.++||.|+..|+.+++++|++.+  ++++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.|
T Consensus        20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~i~~~-d~~g~tpLh~A~~-~~~~~~v~~Ll~~g--a~~~-~~d~~g~t   92 (110)
T 2zgd_A           20 MGSDLGKKLLEAARAGQDDEVRILMANG--ADVAAK-DKNGSTPLHLAAR-NGHLEVVKLLLEAG--ADVX-AQDKFGKT   92 (110)
T ss_dssp             --CCHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCC-CTTCCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTSCC
T ss_pred             cCCccchHHHHHHHcCCHHHHHHHHHcC--CCCCcc-CCCCCCHHHHHHH-cCCHHHHHHHHHcC--CCcc-ccccCCCc
Confidence            3567999999999999999999999999  889866 7888 99999999 99999999999999  8888 89999999


Q ss_pred             HHHHHHhcCCHHHHHHH
Q 036069           84 CMVHAATGGKSKLIEIL  100 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~L  100 (174)
                      |||+|+..|+.+++++|
T Consensus        93 pl~~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           93 AFDISIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHHHHHTCHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHh
Confidence            99999999999999886

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	174
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	5e-06
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-04
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	0.003
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-04
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-05
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-04
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-05
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-04
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	4e-05
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-04
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	0.001
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	0.001
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	0.003

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 43.2 bits (100), Expect = 5e-06
 Identities = 9/67 (13%), Positives = 24/67 (35%), Gaps = 1/67 (1%)

Query: 69  HQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHR 128
            +   ++    +G   ++ AA  G+ +++  L++   +     D +       A    H 
Sbjct: 209 EKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHH 267

Query: 129 DTVRYLL 135
           + V    
Sbjct: 268 NIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 38.9 bits (89), Expect = 1e-04
 Identities = 9/69 (13%), Positives = 19/69 (27%), Gaps = 2/69 (2%)

Query: 85  MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTTAHLDG 144
            +H    G   + E + R + N+  +  +     +H  A     +    L+         
Sbjct: 5   KLHTEAAGSYAITEPITRESVNI--IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIA 62

Query: 145 HDWSTLLKD 153
                   D
Sbjct: 63  AGADVNAMD 71

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 34.7 bits (78), Expect = 0.003
 Identities = 14/69 (20%), Positives = 30/69 (43%)

Query: 69  HQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHR 128
                ++    +G   + +AA      +++ L+    +  + +D+    PI  AAQ G  
Sbjct: 175 DGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRI 234

Query: 129 DTVRYLLSK 137
           + V YL+ +
Sbjct: 235 EVVMYLIQQ 243

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 5e-06
 Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 69  HQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHR 128
                    +  G + +  AA  G + ++ +L++   + PN        P+  A +LG+ 
Sbjct: 318 QHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS-PNEVSSDGTTPLAIAKRLGYI 376

Query: 129 DTVRYL 134
                L
Sbjct: 377 SVTDVL 382

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 4e-05
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 87  HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
            A+  G   +++ L++   + PNV +     P+H AA+ GH +  +YLL  
Sbjct: 6   VASFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYLLQN 55

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 5e-05
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 69  HQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHR 128
            +   Q  ++ +G   +  AA  GK ++ E+L+  + + PN   K+ L P+H A    + 
Sbjct: 120 EKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-PNAAGKNGLTPLHVAVHHNNL 178

Query: 129 DTVRYLLSK 137
           D V+ LL +
Sbjct: 179 DIVKLLLPR 187

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 2e-04
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 77  VSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS 136
            + +    +  AA  G +++ + L++      N + K    P+H AA++GH + V+ LL 
Sbjct: 29  SNVKVETPLHMAARAGHTEVAKYLLQNKAK-VNAKAKDDQTPLHCAARIGHTNMVKLLLE 87

Query: 137 K 137
            
Sbjct: 88  N 88

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 1e-05
 Identities = 9/59 (15%), Positives = 18/59 (30%)

Query: 79  NEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
             G   ++ A       L++ L+       N  D      +  A +L  +     L  +
Sbjct: 217 ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 275

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 5e-04
 Identities = 14/70 (20%), Positives = 26/70 (37%)

Query: 78  SNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK 137
           + E N  ++ A       L++ L+    N+    ++    P+H A Q+   D V  LL  
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 138 TTAHLDGHDW 147
               +     
Sbjct: 62  GADPVLRKKN 71

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.6 bits (96), Expect = 1e-05
 Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 1/69 (1%)

Query: 69  HQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHR 128
               L +     G   +  A     + ++E+L++   + P  R      P+  A    + 
Sbjct: 180 AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-PTARMYGGRTPLGSALLRPNP 238

Query: 129 DTVRYLLSK 137
              R L + 
Sbjct: 239 ILARLLRAH 247

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.9 bits (89), Expect = 1e-04
 Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 2/85 (2%)

Query: 76  WVSNEGNACMVHAATGGKSKLIEILMRY--NPNLPNVRDKSKLLPIHKAAQLGHRDTVRY 133
           +V+ +G+  +  A        ++ L+ +       ++++      +H AA LG   TV  
Sbjct: 4   YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK 63

Query: 134 LLSKTTAHLDGHDWSTLLKDLINCN 158
           L +     L           L    
Sbjct: 64  LYAAGAGVLVAERGGHTALHLACRV 88

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (92), Expect = 4e-05
 Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 69  HQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHR 128
                       G++ +  A+  G   L+  L+R   +  ++++     P+  A      
Sbjct: 165 QHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD-SSLKNCHNDTPLMVARSRRVI 223

Query: 129 DTVR 132
           D +R
Sbjct: 224 DILR 227

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.1 bits (87), Expect = 2e-04
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 69  HQNFLQEWVSNEGNACMVHAATGGKSKLIEILM--RYNPNLPNVRDKSKLLPIHKAAQLG 126
            QN   +  +NE  +         K  ++E L       N+ N +D +    ++ AA+LG
Sbjct: 211 KQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLG 270

Query: 127 HRDTVRYLLSK 137
           +   V  LL  
Sbjct: 271 NISIVDALLDY 281

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 35.9 bits (81), Expect = 0.001
 Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 69  HQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHR 128
             +  ++   ++    +  AA  G  +  + L+    N   + D    LP   A++  H 
Sbjct: 144 MHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFAN-REITDHMDRLPRDVASERLHH 202

Query: 129 DTVRYL 134
           D VR L
Sbjct: 203 DIVRLL 208

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (79), Expect = 0.001
 Identities = 7/71 (9%), Positives = 20/71 (28%), Gaps = 2/71 (2%)

Query: 69  HQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRY--NPNLPNVRDKSKLLPIHKAAQLG 126
                     ++G   +  AA+    ++ + L+            D        +  + G
Sbjct: 55  QFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEG 114

Query: 127 HRDTVRYLLSK 137
           +    ++L   
Sbjct: 115 YTQCSQFLYGV 125

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (76), Expect = 0.003
 Identities = 13/69 (18%), Positives = 25/69 (36%)

Query: 69  HQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHR 128
                     NEGN  +  AA  G  +++E L+++  +    R+         A   G  
Sbjct: 87  EFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRN 146

Query: 129 DTVRYLLSK 137
           + V  + + 
Sbjct: 147 EVVSLMQAN 155

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	174
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.97
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.96
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.96
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.96
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.96
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.96
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.96
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.95
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.95
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.95
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.95
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.95
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.94
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.94
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.93
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.93
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.93
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.93
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.93
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.92
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.92
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.92
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.92
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.91
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.9
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.89
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.89
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.88
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.88
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.87
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.85
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.84
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.81
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.77

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=4.8e-31  Score=185.34  Aligned_cols=152  Identities=11%  Similarity=-0.008  Sum_probs=109.2

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccc--h-------------
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVH--Q-------------   70 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~--~-------------   70 (174)
                      ..|.||||.|+..|+.++++.|++.|  ++++.. +..| ||||+|+. .++.+++++|++...  .             
T Consensus        43 ~~g~TpL~~A~~~g~~~iv~~Ll~~g--a~i~~~-d~~g~tpL~~A~~-~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~  118 (255)
T d1oy3d_          43 DLGQTALHLAAILGEASTVEKLYAAG--AGVLVA-ERGGHTALHLACR-VRAHTCACVLLQPRPSHPRDASDTYLTQSQD  118 (255)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHHTT--CCSSCC-CTTSCCHHHHHTT-TTCHHHHHHHSSSCCSSCCCC----------
T ss_pred             CCCCCccchHHhhccccccccccccc--cccccc-ccccchhhhhhhc-cCchHHHHHHHhhccchhcccchhhhhHHhh
Confidence            34555566665555555555555555  555544 5555 55665555 555555555544220  0             


Q ss_pred             ------------------------------hhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHH
Q 036069           71 ------------------------------NFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIH  120 (174)
Q Consensus        71 ------------------------------~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~  120 (174)
                                                    ..++ .+|..|.||||+|+..++.+++++|++.+.......+..|.||||
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in-~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~  197 (255)
T d1oy3d_         119 CTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE-AENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLH  197 (255)
T ss_dssp             -------------------------CCCGGGGTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred             hcccchHHHHHHHhhcchhHHHHHHhhhcCcccc-cccccCcccccccccccccccccchhccccccccccccccccccc
Confidence                                          0000 356778999999999999999999999988854456778999999


Q ss_pred             HHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069          121 KAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       121 ~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      +|+..|+.+++++|+++|+ .+.++..|.||||+|+..|+.+++
T Consensus       198 ~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~~i~  241 (255)
T d1oy3d_         198 LAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILA  241 (255)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHH
T ss_pred             ccccccHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence            9999999999999999988 677888999999999999988876

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=2.1e-28  Score=159.58  Aligned_cols=146  Identities=14%  Similarity=0.077  Sum_probs=132.5

Q ss_pred             hhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHH
Q 036069            9 SVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVH   87 (174)
Q Consensus         9 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~   87 (174)
                      ..|||+.|++.|+.++++.||+.|  ++++ . +..| ||||+|+. .++.++++.++...  .... ..+..+.++++.
T Consensus         2 ~~t~L~~Aa~~g~~~~v~~LL~~g--a~~~-~-~~~g~t~L~~a~~-~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~   73 (153)
T d1awcb_           2 LGKKLLEAARAGQDDEVRILMANG--APFT-T-DWLGTSPLHLAAQ-YGHFSTTEVLLRAG--VSRD-ARTKVDRTPLHM   73 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHT--CCCC-C-CTTCCCHHHHHHH-HTCHHHHHHHHTTT--CCTT-CCCTTCCCHHHH
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHcC--CCcc-c-ccCCCcccccccc-cccccccccccccc--cccc-cccccccccccc
Confidence            459999999999999999999999  7665 4 7778 99999999 99999999998876  4444 566778899999


Q ss_pred             HHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           88 AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        88 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ++...+.++++++...+.+ .+.++..|.||||+|+..|+.+++++|++.|+ .+.++..|.|||++|+.+|+.|++
T Consensus        74 ~~~~~~~~~~~~l~~~~~~-~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv  149 (153)
T d1awcb_          74 AASEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLA  149 (153)
T ss_dssp             HHHHTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             ccccccceeeecccccCCc-cccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHH
Confidence            9999999999999999998 58899999999999999999999999999999 777899999999999999999876

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-28  Score=161.24  Aligned_cols=145  Identities=17%  Similarity=0.214  Sum_probs=134.2

Q ss_pred             hhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHH
Q 036069            9 SVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVH   87 (174)
Q Consensus         9 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~   87 (174)
                      | ++||.|+..|+.++++.|+++|  ++++.. +..| ||||+| . .|+.+++++|++.+  ++++ ..+..+.++++.
T Consensus         2 ~-~~Lh~Aa~~g~~~~v~~Ll~~g--~d~n~~-d~~g~TpL~~A-~-~~~~ei~~~Ll~~~--a~~~-~~~~~~~~~l~~   72 (156)
T d1ihba_           2 G-NELASAAARGDLEQLTSLLQNN--VNVNAQ-NGFGRTALQVM-K-LGNPEIARRLLLRG--ANPD-LKDRTGFAVIHD   72 (156)
T ss_dssp             H-HHHHHHHHHTCHHHHHHHTTSC--CCTTCC-CTTSCCHHHHC-C-SSCHHHHHHHHHTT--CCTT-CCCTTSCCHHHH
T ss_pred             h-HHHHHHHHcCCHHHHHHHHHCC--CCcCcc-CCccccccccc-c-cccccccccccccc--cccc-cccccCcccccc
Confidence            5 8999999999999999999999  999976 8888 999977 5 68999999999998  7788 899999999999


Q ss_pred             HHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC--CcccCCCCcchHHHHHHcCccccc
Q 036069           88 AATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT--AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        88 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~--~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ++..+..++++.|++.+.. ++..+..|.+|+++|+..++.+++++|+++++  ...++..|.||||+|++.|+.+++
T Consensus        73 ~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv  149 (156)
T d1ihba_          73 AARAGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVV  149 (156)
T ss_dssp             HHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             ccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHH
Confidence            9999999999999999988 58899999999999999999999999999988  344889999999999999998876

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.5e-28  Score=169.90  Aligned_cols=152  Identities=16%  Similarity=0.113  Sum_probs=100.5

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCC-------------------------------ccccccccCCc-cHHHHHH
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTS-------------------------------NTLTDKITGGL-SIFDLIV   52 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~-------------------------------~~~~~~~~~~~-t~L~~A~   52 (174)
                      .|.+|+||||.|+..|+.+++++++..+..                               .+++.. +..| ||||+|+
T Consensus        33 ~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~d~~~~-d~~g~tpL~~A~  111 (223)
T d1uoha_          33 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAV-NQNGCTPLHYAA  111 (223)
T ss_dssp             CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHH
T ss_pred             cCCCCCCHHHHHHHhhhhcccccccccccccccccccccccccccccccccchhHHHhccCceeEee-CCCCCchhhHHH
Confidence            466789999999988888777766655400                               333333 4455 6666666


Q ss_pred             hhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHH
Q 036069           53 NSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVR  132 (174)
Q Consensus        53 ~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~  132 (174)
                      . .|+.+++++|++.+  .+++ ..|..|.||||+|+..++.+++++|...+.+ ++.+|..|+||||+|+..|+.++++
T Consensus       112 ~-~~~~e~~~~Ll~~g--~d~~-~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~-i~~~d~~g~TpL~~Aa~~g~~~~v~  186 (223)
T d1uoha_         112 S-KNRHEIAVMLLEGG--ANPD-AKDHYEATAMHRAAAKGNLKMIHILLYYKAS-TNIQDTEGNTPLHLACDEERVEEAK  186 (223)
T ss_dssp             H-HTCHHHHHHHHHTT--CCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred             H-cCCHHHHHHHHHCC--CCCC-CcCCCCCccchhhhhcCCcchhhhhccccce-eeeccCCCCceeccccccCcHHHHH
Confidence            6 66666666666665  5555 5666666666666666666666666666666 4667777777777777777777777


Q ss_pred             HHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069          133 YLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       133 ~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      +|++.|+ .+.+|.+|.||||+| ..|+.+++
T Consensus       187 ~LL~~Gad~~~~d~~g~tpl~~A-~~~~~~i~  217 (223)
T d1uoha_         187 LLVSQGASIYIENKEEKTPLQVA-KGGLGLIL  217 (223)
T ss_dssp             HHHHTTCCSCCCCTTSCCHHHHC-CTTHHHHH
T ss_pred             HHHHCCCCCCCCCCCCCCHHHHH-HCCCHHHH
Confidence            7777776 556777777777766 34555544

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.2e-28  Score=160.20  Aligned_cols=145  Identities=16%  Similarity=0.125  Sum_probs=131.0

Q ss_pred             hHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHH
Q 036069           10 VMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHA   88 (174)
Q Consensus        10 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A   88 (174)
                      -..|+.|+..|+.++++.|++.+ +.+++.. +..| ||||+|+  .|+.+++++|++.+  .+++ ..+..|.+|++.+
T Consensus         3 g~~L~~Aa~~g~~~~vk~lL~~~-~~~~n~~-d~~g~t~L~~A~--~~~~~~v~~Ll~~~--~~~~-~~~~~~~~~l~~~   75 (156)
T d1bd8a_           3 GDRLSGAAARGDVQEVRRLLHRE-LVHPDAL-NRFGKTALQVMM--FGSTAIALELLKQG--ASPN-VQDTSGTSPVHDA   75 (156)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHTT-CCCTTCC-CTTSCCHHHHSC--TTCHHHHHHHHHTT--CCTT-CCCTTSCCHHHHH
T ss_pred             cHHHHHHHHcCCHHHHHHHHHhC-CCCCCcc-CCCCCccccccc--cccccccccccccc--cccc-ccccccccccccc
Confidence            34599999999999999999986 6889866 8888 9999875  47889999999998  7777 8888999999999


Q ss_pred             HhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069           89 ATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus        89 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      +..++.++++++++.+++ ++.+|..|.||||+|+..|+.+++++|+ .++ .+.++.+|.|||++|++.|+.+++
T Consensus        76 ~~~~~~~~~~~~l~~~~~-~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv  149 (156)
T d1bd8a_          76 ARTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLV  149 (156)
T ss_dssp             HHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHH
T ss_pred             cccccccccccccccccc-cccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHH
Confidence            999999999999999998 5999999999999999999999999887 455 667899999999999999998876

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=4.2e-29  Score=172.76  Aligned_cols=142  Identities=21%  Similarity=0.187  Sum_probs=94.0

Q ss_pred             hHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhh-------------
Q 036069           10 VMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQE-------------   75 (174)
Q Consensus        10 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~-------------   75 (174)
                      ++|||.||..|+.++++.|++.. +..++.+ +..| ||||+|+. .|+.+++++|++.+  ++++.             
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~-~~~~~~~-d~~G~TpL~~A~~-~g~~~iv~~Ll~~g--a~~~~~~~~~~~~~~~~~   75 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSK-PSLLLQK-DQDGRIPLHWSVS-FQAHEITSFLLSKM--ENVNLDDYPDDSGWTPFH   75 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHC-GGGTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHTTC--TTCCGGGCCCTTSCCHHH
T ss_pred             CHhHHHHHHcCCHHHHHHHHHcC-CCccccc-CCCCCCHHHHHHH-cCCccccchhhhhh--cccccccccccccccccc
Confidence            36888888888888888888876 5667655 7777 88888888 88888888888876  22110             


Q ss_pred             ---------------------------------------------------------hcccCCchHHHHHHhcCCHHHHH
Q 036069           76 ---------------------------------------------------------WVSNEGNACMVHAATGGKSKLIE   98 (174)
Q Consensus        76 ---------------------------------------------------------~~d~~g~~~l~~A~~~~~~~~~~   98 (174)
                                                                               .+|..|.||||+|+..|+.++++
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~  155 (229)
T d1ixva_          76 IACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIE  155 (229)
T ss_dssp             HHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccccccc
Confidence                                                                     23445566666666666666666


Q ss_pred             HHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhc-CC-CcccCCCCcchHHHHHH
Q 036069           99 ILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK-TT-AHLDGHDWSTLLKDLIN  156 (174)
Q Consensus        99 ~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~-~~-~~~~~~~g~t~l~~a~~  156 (174)
                      +|++.+...++.+|..|+||||+|+..|+.+++++|+++ |+ .+.++.+|.|||++|+.
T Consensus       156 ~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~  215 (229)
T d1ixva_         156 LLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN  215 (229)
T ss_dssp             HHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC
T ss_pred             cccccccccccccccccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhh
Confidence            666655433455666666666666666666666666643 44 44456666666666553

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.7e-29  Score=169.27  Aligned_cols=150  Identities=15%  Similarity=0.124  Sum_probs=131.8

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHH----cCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhh-------
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIM----SKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQE-------   75 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~----~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~-------   75 (174)
                      +|.||||.||..|+.++++.|++    .|  ++++.. +..| ||||+|+. .|+.+++++|++.+  +..+.       
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g--~~in~~-d~~g~TpL~~A~~-~~~~~iv~~Ll~~g--a~~~~~~~~~~~   75 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGG--RELDIY-NNLRQTPLHLAVI-TTLPSVVRLLVTAG--ASPMALDRHGQT   75 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTT--CCSCCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCTTCCCTTSCC
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHCC--CCCCcc-CCCCCccceehhc-cccccccccccccc--cccccccccccc
Confidence            69999999999999999998875    56  788866 8888 99999999 99999999999876  11110       


Q ss_pred             ---------------------------------------------------------------hcccCCchHHHHHHhcC
Q 036069           76 ---------------------------------------------------------------WVSNEGNACMVHAATGG   92 (174)
Q Consensus        76 ---------------------------------------------------------------~~d~~g~~~l~~A~~~~   92 (174)
                                                                                     ..+..+.++++.|+..+
T Consensus        76 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~  155 (228)
T d1k1aa_          76 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN  155 (228)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred             ccccccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhh
Confidence                                                                           12345789999999999


Q ss_pred             CHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069           93 KSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus        93 ~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      ...+++++++.+.. .+.+|..|.|||++|+..|+.+++++|+++|+ .+.++.+|.||||+|++.|+.|++.
T Consensus       156 ~~~~~~~~~~~~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         156 SLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             CHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred             hhhhhhhhhhhccc-cccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCccccC
Confidence            99999999999988 48899999999999999999999999999998 7778999999999999999988763

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.95  E-value=5.7e-29  Score=176.29  Aligned_cols=87  Identities=18%  Similarity=0.124  Sum_probs=73.8

Q ss_pred             ccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHH
Q 036069           78 SNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLIN  156 (174)
Q Consensus        78 d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~  156 (174)
                      +..|.||||+++..++.+++++++.......+.+|..|+||||+|+..|+.+++++|+++|+ .+.+|.+|.||||+|++
T Consensus       184 ~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~  263 (277)
T d2fo1e1         184 KYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQA  263 (277)
T ss_dssp             SCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHH
T ss_pred             ccCCCCccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHH
Confidence            34577888888888888888776654433357889999999999999999999999999998 77789999999999999


Q ss_pred             cCcccccc
Q 036069          157 CNLFGKYY  164 (174)
Q Consensus       157 ~~~~~~~~  164 (174)
                      .|+.+++-
T Consensus       264 ~~~~~iv~  271 (277)
T d2fo1e1         264 NNHHNIVD  271 (277)
T ss_dssp             TTCHHHHH
T ss_pred             cCCHHHHH
Confidence            99988873

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.7e-28  Score=166.90  Aligned_cols=123  Identities=11%  Similarity=0.055  Sum_probs=114.2

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .|.+|.||||.|+..|+.++++.|++.|  .+++.. +..+ ||||+|+. .++.+++++|++.+  .+++ .+|..|.|
T Consensus        99 ~d~~g~tpL~~A~~~~~~e~~~~Ll~~g--~d~~~~-~~~~~t~L~~a~~-~~~~~~~~~L~~~~--~~i~-~~d~~g~T  171 (223)
T d1uoha_          99 VNQNGCTPLHYAASKNRHEIAVMLLEGG--ANPDAK-DHYEATAMHRAAA-KGNLKMIHILLYYK--ASTN-IQDTEGNT  171 (223)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCSC-CCCTTCCC
T ss_pred             eCCCCCchhhHHHHcCCHHHHHHHHHCC--CCCCCc-CCCCCccchhhhh-cCCcchhhhhcccc--ceee-eccCCCCc
Confidence            4667999999999999999999999999  888866 7888 99999999 99999999999998  7788 99999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHh
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS  136 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~  136 (174)
                      |||+|+..|+.+++++|++.|++ ++.+|..|+||||+| ..|+.+++++|++
T Consensus       172 pL~~Aa~~g~~~~v~~LL~~Gad-~~~~d~~g~tpl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         172 PLHLACDEERVEEAKLLVSQGAS-IYIENKEEKTPLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred             eeccccccCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHH-HCCCHHHHhcccC
Confidence            99999999999999999999999 599999999999998 5689999999875

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.1e-28  Score=166.82  Aligned_cols=155  Identities=12%  Similarity=0.030  Sum_probs=134.5

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhcc----chhhhhhhccc
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKV----HQNFLQEWVSN   79 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~----~~~~~~~~~d~   79 (174)
                      .|.+|.||||.|+..|+.+++++|++.|  ++++.. +..| +||++++. .++.++++.|+..+    ...... ....
T Consensus        35 ~d~~g~TpLh~A~~~~~~~iv~~L~~~g--~d~~~~-d~~g~t~l~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~-~~~~  109 (221)
T d1iknd_          35 QNNLQQTPLHLAVITNQPEIAEALLGAG--CDPELR-DFRGNTPLHLACE-QGCLASVGVLTQSCTTPHLHSILK-ATNY  109 (221)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHCCCSCC--CCSCCC-CTTCCCHHHHHHH-HTCHHHHHHHHHSTTTTSSSCGGG-CCCT
T ss_pred             CCCCCCcccccccccccccccccccccc--cccccc-ccccccccccccc-cccccccchhhhhccccccccccc-cccc
Confidence            3668999999999999999999999999  888866 8888 99999999 99999999999876    112222 3455


Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcC
Q 036069           80 EGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCN  158 (174)
Q Consensus        80 ~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~  158 (174)
                      .|.||+|.|+..++.+++++|+..+..+....+..|.||||+|+..|+.+++++|+++|+ .+.++.+|.|||++|+..+
T Consensus       110 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~  189 (221)
T d1iknd_         110 NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRP  189 (221)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSS
T ss_pred             ccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCCcccccCCCCCCHHHHHHHCC
Confidence            689999999999999999999999988533445679999999999999999999999999 7779999999999999999


Q ss_pred             cccccc
Q 036069          159 LFGKYY  164 (174)
Q Consensus       159 ~~~~~~  164 (174)
                      +.+++.
T Consensus       190 ~~~~~~  195 (221)
T d1iknd_         190 STRIQQ  195 (221)
T ss_dssp             CHHHHH
T ss_pred             CHHHHH
Confidence            877763

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.95  E-value=7.8e-27  Score=159.12  Aligned_cols=152  Identities=12%  Similarity=0.048  Sum_probs=130.1

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHh-----------------
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVS-----------------   66 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~-----------------   66 (174)
                      .|.+|.||||+||..|+.+++++|++.+  +.++.+ +..+ ++++.++. .++.........                 
T Consensus        19 ~d~~G~t~L~~A~~~g~~e~v~~Ll~~g--~~~n~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (209)
T d1ot8a_          19 MDKTGETSLHLAARFARADAAKRLLDAG--ADANSQ-DNTGRTPLHAAVA-ADAMGVFQILLRNRATNLNARMHDGTTPL   94 (209)
T ss_dssp             HHHHCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHTCTTCCTTCCCTTCCCHH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHhhc--cccccc-ccccccccccccc-ccccccccccccccccccccccccccccc
Confidence            3678999999999999999999999999  888866 6666 88888887 666554333332                 


Q ss_pred             -----------------ccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChH
Q 036069           67 -----------------KVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRD  129 (174)
Q Consensus        67 -----------------~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~  129 (174)
                                       .+  .+++ ..+..|.||+++++..+...+++.++..+.. ++.+|..|.||||+|+..|+.+
T Consensus        95 ~~~~~~~~~~~~~~L~~~~--~~~~-~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~-~~~~d~~g~TpL~~A~~~g~~~  170 (209)
T d1ot8a_          95 ILAARLAIEGMVEDLITAD--ADIN-AADNSGKTALHWAAAVNNTEAVNILLMHHAN-RDAQDDKDETPLFLAAREGSYE  170 (209)
T ss_dssp             HHHHHTTCTTHHHHHHHTT--CCTT-CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHH
T ss_pred             cccccccchhhhhhhhhhc--cccc-ccCCCCCCcchhhcccCcceeeeeecccccc-ccccccccccccchhccccHHH
Confidence                             22  3334 5678899999999999999999999999988 5999999999999999999999


Q ss_pred             HHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          130 TVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       130 ~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      ++++|+++|+ ...++..|.|||++|++.|+.++|.
T Consensus       171 ~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~  206 (209)
T d1ot8a_         171 ASKALLDNFANREITDHMDRLPRDVASERLHHDIVR  206 (209)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHh
Confidence            9999999999 6778999999999999999999873

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-27  Score=151.47  Aligned_cols=119  Identities=18%  Similarity=0.152  Sum_probs=108.0

Q ss_pred             hhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCc-hHHH
Q 036069            9 SVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGN-ACMV   86 (174)
Q Consensus         9 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~-~~l~   86 (174)
                      +.++||.|+..|+.+++++|++.|  ++++.. +..| |++|+| . .|+.+++++|++.+  .+++ .++..+. +|||
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~g--ad~n~~-~~~g~t~l~~a-~-~g~~~~v~~Ll~~g--a~~~-~~~~~~~~~~L~   74 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAG--ANPNAP-NSYGRRPIQVM-M-MGSARVAELLLLHG--AEPN-CADPATLTRPVH   74 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTT--CCTTCC-CSSSCCTTTSS-C-TTCHHHHHHHHTTT--CCCC-CCCTTTCCCHHH
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcC--Cccccc-ccccccccccc-c-cccccccccccccc--cccc-cccccccccccc
Confidence            567899999999999999999999  999966 8888 999865 6 68999999999998  7777 8887765 6999


Q ss_pred             HHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHh
Q 036069           87 HAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS  136 (174)
Q Consensus        87 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~  136 (174)
                      +|+..|+.+++++|++.|++ ++.+|..|+||+|+|+..|+.+++++|++
T Consensus        75 ~A~~~g~~~~v~~Ll~~ga~-~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          75 DAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             cccccccccccccccccccc-cccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            99999999999999999998 59999999999999999999999999975

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.94  E-value=2.5e-26  Score=163.93  Aligned_cols=144  Identities=14%  Similarity=0.145  Sum_probs=120.9

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhh---------
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQE---------   75 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~---------   75 (174)
                      ++++.|+|+.||..|+.++|+.||++|  ++++.. +..| ||||+|+. .|+.+++++|++++  .+...         
T Consensus        37 ~~~~~t~l~~A~~~G~~~~v~~Ll~~G--advn~~-d~~G~T~L~~A~~-~g~~eiv~~Ll~~~--~~~~~~~~~~~~~L  110 (291)
T d1s70b_          37 KFDDGAVFLAACSSGDTEEVLRLLERG--ADINYA-NVDGLTALHQACI-DDNVDMVKFLVENG--ANINQPDNEGWIPL  110 (291)
T ss_dssp             EECHHHHHHHHHHHTCHHHHHHHHHHC--CCTTCB-CTTCCBHHHHHHH-TTCHHHHHHHHHTT--CCTTCCCTTSCCHH
T ss_pred             CCCCchHHHHHHHcCCHHHHHHHHHCC--CCCCcc-CCCCCcHHHHHHh-cCCceeeeeecccc--cccccccccccccc
Confidence            456889999999999999999999999  999966 8888 99999999 99999999999876  11110         


Q ss_pred             --------------------------------------------------------------------------------
Q 036069           76 --------------------------------------------------------------------------------   75 (174)
Q Consensus        76 --------------------------------------------------------------------------------   75 (174)
                                                                                                      
T Consensus       111 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (291)
T d1s70b_         111 HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI  190 (291)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             cccccccccchhhcccccCcccccccccCccccccccccccchhccccccccccccccccccccccccccchhhhccccc
Confidence                                                                                            


Q ss_pred             ---hcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchH
Q 036069           76 ---WVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLL  151 (174)
Q Consensus        76 ---~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l  151 (174)
                         ..+..|.||||.|+..|+.+++++|++.|++ ++.++..|+||||+|+..|+.+++++|+++|+ .+.+|..|.|||
T Consensus       191 ~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~d-in~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL  269 (291)
T d1s70b_         191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAF  269 (291)
T ss_dssp             CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTT
T ss_pred             ccccccCCCCChhhHHHHcCChhhhcccccceec-ccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence               1345577888888888888888888888888 58888888899999999999999999888888 666888888998


Q ss_pred             HHHHH
Q 036069          152 KDLIN  156 (174)
Q Consensus       152 ~~a~~  156 (174)
                      ++|++
T Consensus       270 ~~A~e  274 (291)
T d1s70b_         270 DVADE  274 (291)
T ss_dssp             TSCCS
T ss_pred             HHHHH
Confidence            88864

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-25  Score=159.73  Aligned_cols=153  Identities=15%  Similarity=0.131  Sum_probs=127.1

Q ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhh----------
Q 036069            7 IDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQE----------   75 (174)
Q Consensus         7 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~----------   75 (174)
                      .++.++|+.|++.|+.++++.|++.|  ++++.+.+..| ||||+|+. .|+.+++++|++.+  .....          
T Consensus         3 ~~~~~~L~~Ai~~~~~e~vk~Ll~~G--~din~~~~~~g~tpL~~A~~-~~~~eiv~~L~~~~--~~~~~~~~~~~~~~~   77 (285)
T d1wdya_           3 VEDNHLLIKAVQNEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQ-MSREDIVELLLRHG--ADPVLRKKNGATPFL   77 (285)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTTCCCHHHHHHH-TTCHHHHHHHHHTT--CCTTCCCTTCCCHHH
T ss_pred             CCCcHHHHHHHHcCCHHHHHHHHHCC--CCcCccCCCCCCCHHHHHHH-cCCHHHhhhhcccc--ccccccccccchhhH
Confidence            46889999999999999999999999  99987756678 99999999 99999999998865  10000          


Q ss_pred             -----------------------------------------------------------------hcccCCchHHHHHHh
Q 036069           76 -----------------------------------------------------------------WVSNEGNACMVHAAT   90 (174)
Q Consensus        76 -----------------------------------------------------------------~~d~~g~~~l~~A~~   90 (174)
                                                                                       ..+..|.||||+|+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~  157 (285)
T d1wdya_          78 LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE  157 (285)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred             HHhhcCCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHH
Confidence                                                                             223458899999999


Q ss_pred             cCCHHHHHHHHHh-CCCC------------------------------------CCCCCCCCccHHHHHHhcCChHHHHH
Q 036069           91 GGKSKLIEILMRY-NPNL------------------------------------PNVRDKSKLLPIHKAAQLGHRDTVRY  133 (174)
Q Consensus        91 ~~~~~~~~~Ll~~-~~~~------------------------------------~~~~~~~~~tpl~~a~~~~~~~~~~~  133 (174)
                      .|+.+++++|++. ++++                                    ++.++..|.||||.|+..|+.+++++
T Consensus       158 ~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~  237 (285)
T d1wdya_         158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR  237 (285)
T ss_dssp             HTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             cCCHHHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchhhhcCcHHHHHH
Confidence            9998888888764 3222                                    35678889999999999999999999


Q ss_pred             HHhc-CC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          134 LLSK-TT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       134 ll~~-~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      |++. |. .+.++.+|.||||+|++.|+.+++-
T Consensus       238 lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~  270 (285)
T d1wdya_         238 LLEQEHIEINDTDSDGKTALLLAVELKLKKIAE  270 (285)
T ss_dssp             HHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             HHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHH
Confidence            9986 44 5558899999999999999998873

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.1e-26  Score=169.35  Aligned_cols=151  Identities=17%  Similarity=0.165  Sum_probs=139.9

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+..+.+||+.|+..++.++++.++..+  ...+.. +..| +|++.|+. .++.+++++|++.+  .+++ ..+..+.|
T Consensus       227 ~~~~~~t~l~~a~~~~~~~~~~~~~~~~--~~~~~~-~~~g~~~l~~a~~-~~~~~i~~~Ll~~g--~~~~-~~~~~~~t  299 (408)
T d1n11a_         227 ESVQGVTPLHLAAQEGHAEMVALLLSKQ--ANGNLG-NKSGLTPLHLVAQ-EGHVPVADVLIKHG--VMVD-ATTRMGYT  299 (408)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHTTT--CCTTCC-CTTCCCHHHHHHH-HTCHHHHHHHHHHT--CCTT-CCCSSCCC
T ss_pred             cCCCCCCHHHHHHHhCcHhHhhhhhccc--cccccc-cCCCCChhhhhhh-cCcHHHHHHHHHCC--Cccc-cccccccc
Confidence            4567889999999999999999999988  777755 7778 99999999 99999999999998  7777 88889999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccc
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGK  162 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~  162 (174)
                      |||.++..++.++++++++.|++ ++.+|..|.||||+|++.|+.+++++|+++|+ .+.++.+|.|||++|++.|+.++
T Consensus       300 ~L~~~~~~~~~~~~~~ll~~g~~-in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~i  378 (408)
T d1n11a_         300 PLHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISV  378 (408)
T ss_dssp             HHHHHHHSSCSHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHH
T ss_pred             cchhhcccCcceeeeeecccccc-ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence            99999999999999999999999 59999999999999999999999999999999 77899999999999999999887


Q ss_pred             c
Q 036069          163 Y  163 (174)
Q Consensus       163 ~  163 (174)
                      |
T Consensus       379 v  379 (408)
T d1n11a_         379 T  379 (408)
T ss_dssp             H
T ss_pred             H
Confidence            6

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.1e-25  Score=166.95  Aligned_cols=147  Identities=13%  Similarity=0.146  Sum_probs=129.0

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHH
Q 036069           11 MQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAA   89 (174)
Q Consensus        11 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~   89 (174)
                      ||||.||..|+.++|++|++.|  ++++.. +..| ||||+|++ .|+.+++++|++++  ++++ .++..|.||||+|+
T Consensus         2 TpL~~Aa~~g~~~~v~~Ll~~g--~~in~~-d~~g~TpL~~A~~-~g~~~iv~~Ll~~g--adi~-~~~~~g~t~L~~A~   74 (408)
T d1n11a_           2 TPLHVASFMGHLPIVKNLLQRG--ASPNVS-NVKVETPLHMAAR-AGHTEVAKYLLQNK--AKVN-AKAKDDQTPLHCAA   74 (408)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTT--CCSCCS-SSCCCCHHHHHHH-HTCHHHHHHHHHHT--CCSS-CCCTTSCCHHHHHH
T ss_pred             ChHHHHHHCcCHHHHHHHHHCC--CCCCCC-CCCCCCHHHHHHH-cCCHHHHHHHHHCc--CCCC-CCCCCCCCHHHHHH
Confidence            8999999999999999999999  899966 8888 99999999 99999999999999  8888 89999999999999


Q ss_pred             hcCCHHHHHHHHHhCCCC--------------------------------CCCCCCCCccHHHHHHhcCChHHHHHHHhc
Q 036069           90 TGGKSKLIEILMRYNPNL--------------------------------PNVRDKSKLLPIHKAAQLGHRDTVRYLLSK  137 (174)
Q Consensus        90 ~~~~~~~~~~Ll~~~~~~--------------------------------~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~  137 (174)
                      ..|+.+++++|+......                                ....+..+.++++.|+..++.+++++|+++
T Consensus        75 ~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~  154 (408)
T d1n11a_          75 RIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER  154 (408)
T ss_dssp             HHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             HcCCHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHc
Confidence            999999999998765432                                334566788889999999999999999988


Q ss_pred             CC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          138 TT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       138 ~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      +. .+..+.+|.+||+.|+..|+.+++.
T Consensus       155 ~~~~~~~~~~~~~~L~~A~~~~~~~~~~  182 (408)
T d1n11a_         155 DAHPNAAGKNGLTPLHVAVHHNNLDIVK  182 (408)
T ss_dssp             TCCTTCCCSSCCCHHHHHHHTTCHHHHH
T ss_pred             CCCCCcCCCcCchHHHHHHHcCCHHHHH
Confidence            88 6677888899999999988877663

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=3.9e-27  Score=147.40  Aligned_cols=104  Identities=11%  Similarity=0.157  Sum_probs=65.4

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHH
Q 036069           11 MQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAA   89 (174)
Q Consensus        11 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~   89 (174)
                      |||++|++.|+.++++.|++.|  ++++.. +..| ||||+|+. .|+.+++++|++.+  .+++ .+|..|.||||+|+
T Consensus         4 tpL~~A~~~g~~~~v~~Ll~~g--~d~n~~-~~~g~t~lh~A~~-~~~~~~~~~ll~~g--~din-~~d~~g~tpLh~A~   76 (118)
T d1myoa_           4 KEFMWALKNGDLDEVKDYVAKG--EDVNRT-LEGGRKPLHYAAD-CGQLEILEFLLLKG--ADIN-APDKHHITPLLSAV   76 (118)
T ss_dssp             HHHHHHHHTTCHHHHHHHHTTT--CCCCCC-SSSSCCTTHHHHH-HSTTTHHHHHHHSS--CTTT-CCSSSCSCHHHHHH
T ss_pred             hHHHHHHHCCCHHHHHHHHHhh--hccccc-ccccccccccccc-cccccccccccccc--ceee-ecccccccchhhhh
Confidence            5666666666666666666666  566544 5555 66666666 66666666666666  5555 66666666666666


Q ss_pred             hcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHH
Q 036069           90 TGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKA  122 (174)
Q Consensus        90 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a  122 (174)
                      ..|+.+++++|++.|++ ++.+|..|.||+++|
T Consensus        77 ~~~~~~~v~~Ll~~Gad-~~~~d~~G~t~l~~a  108 (118)
T d1myoa_          77 YEGHVSCVKLLLSKGAD-KTVKGPDGLTALEAT  108 (118)
T ss_dssp             TTTCCHHHHHHHTTCCC-SSSSSSSTCCCCCTC
T ss_pred             hcCchhhhhhhhccccc-ceeeCCCCCCHHHHH
Confidence            66666666666666666 366666666666655

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.93  E-value=1.4e-25  Score=159.95  Aligned_cols=83  Identities=17%  Similarity=0.123  Sum_probs=71.2

Q ss_pred             cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhc
Q 036069           46 SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQL  125 (174)
Q Consensus        46 t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~  125 (174)
                      ||||+|+. .|+.++++.|++.+  .+++ .++..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+. 
T Consensus       201 t~L~~a~~-~~~~~~~~~Ll~~g--~din-~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gad-v~~~d~~G~TaL~~A~e-  274 (291)
T d1s70b_         201 TALHVAAA-KGYTEVLKLLIQAR--YDVN-IKDYDGWTPLHAAAHWGKEEACRILVENLCD-MEAVNKVGQTAFDVADE-  274 (291)
T ss_dssp             CHHHHHHH-HTCHHHHHHHHTTT--CCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCTTTSCCS-
T ss_pred             ChhhHHHH-cCChhhhcccccce--eccc-ccccCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHH-
Confidence            66777777 77888888888877  7777 8899999999999999999999999999999 59999999999999975 


Q ss_pred             CChHHHHHHHhc
Q 036069          126 GHRDTVRYLLSK  137 (174)
Q Consensus       126 ~~~~~~~~ll~~  137 (174)
                         +++++|.+.
T Consensus       275 ---~~~~~L~~~  283 (291)
T d1s70b_         275 ---DILGYLEEL  283 (291)
T ss_dssp             ---GGGHHHHHH
T ss_pred             ---HHHHHHHHH
Confidence               566666543

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=1.1e-26  Score=145.39  Aligned_cols=105  Identities=24%  Similarity=0.251  Sum_probs=99.9

Q ss_pred             cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhc
Q 036069           46 SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQL  125 (174)
Q Consensus        46 t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~  125 (174)
                      |||++|++ .|+.+++++|++.+  .+++ .+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..
T Consensus         4 tpL~~A~~-~g~~~~v~~Ll~~g--~d~n-~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~d-in~~d~~g~tpLh~A~~~   78 (118)
T d1myoa_           4 KEFMWALK-NGDLDEVKDYVAKG--EDVN-RTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAVYE   78 (118)
T ss_dssp             HHHHHHHH-TTCHHHHHHHHTTT--CCCC-CCSSSSCCTTHHHHHHSTTTHHHHHHHSSCT-TTCCSSSCSCHHHHHHTT
T ss_pred             hHHHHHHH-CCCHHHHHHHHHhh--hccc-cccccccccccccccccccccccccccccce-eeecccccccchhhhhhc
Confidence            79999999 99999999999999  8888 8999999999999999999999999999999 599999999999999999


Q ss_pred             CChHHHHHHHhcCC-CcccCCCCcchHHHHH
Q 036069          126 GHRDTVRYLLSKTT-AHLDGHDWSTLLKDLI  155 (174)
Q Consensus       126 ~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~  155 (174)
                      |+.+++++|+++|+ .+.++.+|.|||++|.
T Consensus        79 ~~~~~v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          79 GHVSCVKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             TCCHHHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             CchhhhhhhhcccccceeeCCCCCCHHHHHh
Confidence            99999999999998 7779999999999873

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.1e-25  Score=143.07  Aligned_cols=120  Identities=10%  Similarity=0.049  Sum_probs=106.5

Q ss_pred             hHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHH
Q 036069           10 VMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHA   88 (174)
Q Consensus        10 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A   88 (174)
                      .+.|+.|+..|+.++++.|+++|  ++++.+ +..| ||||+|+. .|+.+++++|++.+  .+++ .+|.+|+||||+|
T Consensus         2 l~lL~~A~~~G~~~~v~~Ll~~g--~d~n~~-d~~g~t~Lh~A~~-~~~~~~~~~ll~~g--~~~~-~~d~~g~tpLh~A   74 (130)
T d1ycsb1           2 LALLLDSSLEGEFDLVQRIIYEV--DDPSLP-NDEGITALHNAVC-AGHTEIVKFLVQFG--VNVN-AADSDGWTPLHCA   74 (130)
T ss_dssp             HHHHHHHHHHTCHHHHHHHTSTT--SSCCCC-CTTSCCHHHHHHH-HTCHHHHHHHHHHT--CCTT-CCCTTCCCHHHHH
T ss_pred             hHHHHHHHHcCCHHHHHHHHHcC--CCcccc-ccccccccccccc-cccccccccccccc--cccc-cccccCccccccc
Confidence            46899999999999999999999  899977 8888 99999999 99999999999998  7888 8999999999999


Q ss_pred             HhcCCHHHHHHHHHhCCCCCCCCC-CCCccHHHHH--HhcCChHHHHHHHhc
Q 036069           89 ATGGKSKLIEILMRYNPNLPNVRD-KSKLLPIHKA--AQLGHRDTVRYLLSK  137 (174)
Q Consensus        89 ~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~tpl~~a--~~~~~~~~~~~ll~~  137 (174)
                      +.+|+.+++++|+++|++ ++..+ ..+.||+.++  +..|+.+++++|++.
T Consensus        75 ~~~g~~~~v~~Ll~~ga~-v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          75 ASCNNVQVCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             HHTTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             chhhHHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence            999999999999999998 47655 4578887665  567899999999875

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.5e-25  Score=161.16  Aligned_cols=140  Identities=13%  Similarity=0.026  Sum_probs=112.3

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCH-------HHHHHHHhccchhhhhhhc
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPP-------MFLDKLVSKVHQNFLQEWV   77 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~-------~~v~~Ll~~~~~~~~~~~~   77 (174)
                      |.+|+||||+|+..|+.++++.|++.|  ++++.+ +..| ||||.|+. .++.       ++++++.     ..+. ..
T Consensus       104 D~~G~T~LH~Aa~~g~~~~v~~Ll~~g--ad~~~~-d~~G~TpL~~A~~-~~~~~~~~~~~~ll~~l~-----~~~~-~~  173 (301)
T d1sw6a_         104 DEHGNTPLHWLTSIANLELVKHLVKHG--SNRLYG-DNMGESCLVKAVK-SVNNYDSGTFEALLDYLY-----PCLI-LE  173 (301)
T ss_dssp             STTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTBC-CTTCCCHHHHHHH-SSHHHHTTCHHHHHHHHG-----GGGG-EE
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCcC-CcccccHHHHhhh-cccchhhhhHHHHHHHHh-----hhhh-hc
Confidence            678999999999999999999999999  999976 8888 99999998 7752       3344432     3344 77


Q ss_pred             ccCCchHHHHHHhcCC----HHH--------HHHHHHhCCCC------------------------------------CC
Q 036069           78 SNEGNACMVHAATGGK----SKL--------IEILMRYNPNL------------------------------------PN  109 (174)
Q Consensus        78 d~~g~~~l~~A~~~~~----~~~--------~~~Ll~~~~~~------------------------------------~~  109 (174)
                      |..|+||||+++..+.    ..+        +.++...+...                                    ++
T Consensus       174 d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in  253 (301)
T d1sw6a_         174 DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN  253 (301)
T ss_dssp             CTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTT
T ss_pred             ccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcCcc
Confidence            8889999998875432    222        33444433221                                    47


Q ss_pred             CCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHH
Q 036069          110 VRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLI  155 (174)
Q Consensus       110 ~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~  155 (174)
                      .+|..|+||||+|++.|+.+++++|++.|+ .+.+|..|.|||++|+
T Consensus       254 ~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         254 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             CCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence            789999999999999999999999999999 8889999999999875

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=5.6e-25  Score=154.07  Aligned_cols=131  Identities=11%  Similarity=0.036  Sum_probs=111.1

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCC---------------------------------------------ccccc
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTS---------------------------------------------NTLTD   39 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~---------------------------------------------~~~~~   39 (174)
                      .|.+|.+|||.|+..++.++++.|++....                                             ..++.
T Consensus        74 ~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~  153 (255)
T d1oy3d_          74 AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA  153 (255)
T ss_dssp             CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTC
T ss_pred             cccccchhhhhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCccccc
Confidence            467899999999999999999998764410                                             00111


Q ss_pred             cccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccH
Q 036069           40 KITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLP  118 (174)
Q Consensus        40 ~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tp  118 (174)
                      + +..| ||||+|+. .++.+++++|++.+  .......+..|.||||+|+..++.+++++|+++|++ ++.+|..|.||
T Consensus       154 ~-d~~g~TpLh~A~~-~~~~~~v~~Ll~~~--~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gad-in~~d~~g~t~  228 (255)
T d1oy3d_         154 E-NYDGHTPLHVAVI-HKDAEMVRLLRDAG--ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-PTARMYGGRTP  228 (255)
T ss_dssp             C-CTTSCCHHHHHHH-TTCHHHHHHHHHHT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred             c-cccCccccccccc-ccccccccchhccc--ccccccccccccccccccccccHHHHHHHHHHCCCC-CCCCCCCCCCH
Confidence            1 4457 99999999 99999999999987  544413467799999999999999999999999999 59999999999


Q ss_pred             HHHHHhcCChHHHHHHHhcCCC
Q 036069          119 IHKAAQLGHRDTVRYLLSKTTA  140 (174)
Q Consensus       119 l~~a~~~~~~~~~~~ll~~~~~  140 (174)
                      ||+|+..|+.+++++|+++|++
T Consensus       229 L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         229 LGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             HHHHHTSSCHHHHHHHHHTTCC
T ss_pred             HHHHHHCCCHHHHHHHHHcCCC
Confidence            9999999999999999999995

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=8.2e-25  Score=142.60  Aligned_cols=126  Identities=17%  Similarity=0.181  Sum_probs=110.5

Q ss_pred             hhhHHHHHHHHhCCHHHHHHHHHcCCCcccccc-----ccCCc-cHHHHHHhh--CCCHHHHHHHHhccchhhhhhhccc
Q 036069            8 DSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDK-----ITGGL-SIFDLIVNS--DAPPMFLDKLVSKVHQNFLQEWVSN   79 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~-----~~~~~-t~L~~A~~~--~g~~~~v~~Ll~~~~~~~~~~~~d~   79 (174)
                      .....|..|++.+++..+..++..|  .+++..     .+..| ||||+|++.  .++.+++++|++.+  ++++ .+|.
T Consensus         5 ~~l~~L~~Av~~~dl~~l~~~~~~g--~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g--adin-~~d~   79 (154)
T d1dcqa1           5 AKLHSLCEAVKTRDIFGLLQAYADG--VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS--GNLD-KQTG   79 (154)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTT--CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC--SCTT-CCCT
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHcC--CCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcC--CChh-hhhh
Confidence            3455678999999999999999988  665533     24557 999999961  36789999999999  8888 9999


Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           80 EGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        80 ~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      .|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.+.
T Consensus        80 ~g~TpLh~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~  138 (154)
T d1dcqa1          80 KGSTALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALS  138 (154)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             hhccccccccccccccccccccccCcc-ccccCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence            999999999999999999999999999 59999999999999999999999999998766

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=7.1e-26  Score=143.01  Aligned_cols=113  Identities=15%  Similarity=0.065  Sum_probs=104.2

Q ss_pred             cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCc-cHHHHHHh
Q 036069           46 SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKL-LPIHKAAQ  124 (174)
Q Consensus        46 t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-tpl~~a~~  124 (174)
                      ++||+|++ .|+.+++++|++.+  .+++ .+|..|.||+|+|+ .|+.+++++|++.|++ ++.++..+. ||||+|+.
T Consensus         5 ~~L~~Aa~-~G~~~~v~~Ll~~g--ad~n-~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~L~~A~~   78 (125)
T d1bi7b_           5 DWLATAAA-RGRVEEVRALLEAG--ANPN-APNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRPVHDAAR   78 (125)
T ss_dssp             THHHHHHH-HTCHHHHHHHHTTT--CCTT-CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCHHHHHHH
T ss_pred             hHHHHHHH-CCCHHHHHHHHHcC--Cccc-cccccccccccccc-cccccccccccccccc-cccccccccccccccccc
Confidence            79999999 99999999999999  7888 99999999999765 7999999999999999 588888775 69999999


Q ss_pred             cCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          125 LGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       125 ~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      .|+.+++++|+++|+ .+.++..|.|||++|++.|+.+++.
T Consensus        79 ~g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~  119 (125)
T d1bi7b_          79 EGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVAR  119 (125)
T ss_dssp             HTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred             cccccccccccccccccccccCCCCCHHHHHHHcCCHHHHH
Confidence            999999999999998 7789999999999999999998873

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.4e-26  Score=156.54  Aligned_cols=150  Identities=13%  Similarity=0.016  Sum_probs=125.5

Q ss_pred             hhhHHHHHHHHhCCHH----HHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCc
Q 036069            8 DSVMQVTRYILKNDWK----DLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGN   82 (174)
Q Consensus         8 ~~~~~L~~A~~~g~~~----~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~   82 (174)
                      +|.||||+|+..|+.+    +++.+...+  .+++.+ +..| ||||+|+. .|+.+++++|++.+  +++. .+|..|.
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~--~~in~~-d~~g~TpLh~A~~-~~~~~iv~~L~~~g--~d~~-~~d~~g~   73 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDL--AFLNFQ-NNLQQTPLHLAVI-TNQPEIAEALLGAG--CDPE-LRDFRGN   73 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----C--CCCCCC-CTTCCCHHHHHHH-TTCHHHHHCCCSCC--CCSC-CCCTTCC
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCC--CCcccC-CCCCCcccccccc-cccccccccccccc--cccc-ccccccc
Confidence            5899999999999965    445556677  788876 7888 99999999 99999999999999  7788 8999999


Q ss_pred             hHHHHHHhcCCHHHHHHHHHhCCCC-----CCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-Ccc-cCCCCcchHHHHH
Q 036069           83 ACMVHAATGGKSKLIEILMRYNPNL-----PNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHL-DGHDWSTLLKDLI  155 (174)
Q Consensus        83 ~~l~~A~~~~~~~~~~~Ll~~~~~~-----~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~-~~~~g~t~l~~a~  155 (174)
                      +|++.++..++.++++.|++.+...     .......|.||++.|+..++.+++++++..+. ... .+.+|.||||.|+
T Consensus        74 t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~  153 (221)
T d1iknd_          74 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAV  153 (221)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHH
T ss_pred             cccccccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCcccccc
Confidence            9999999999999999999876442     12335568899999999999999999999988 443 5678999999999


Q ss_pred             HcCcccccc
Q 036069          156 NCNLFGKYY  164 (174)
Q Consensus       156 ~~~~~~~~~  164 (174)
                      ..|+.+++-
T Consensus       154 ~~g~~~~v~  162 (221)
T d1iknd_         154 DLQNPDLVS  162 (221)
T ss_dssp             HTTCHHHHH
T ss_pred             ccccHHHHH
Confidence            999988763

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.1e-24  Score=142.31  Aligned_cols=124  Identities=15%  Similarity=0.052  Sum_probs=112.3

Q ss_pred             cccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCc
Q 036069            4 ITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGN   82 (174)
Q Consensus         4 ~~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~   82 (174)
                      ..|..|+||||.|+ .|+.+++++|++.+  .+++.. +..+ +|++.++. .++.++++++++.+  .+++ .+|..|.
T Consensus        31 ~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~--~~~~~~-~~~~~~~l~~~~~-~~~~~~~~~~l~~~--~~~n-~~~~~~~  102 (156)
T d1bd8a_          31 ALNRFGKTALQVMM-FGSTAIALELLKQG--ASPNVQ-DTSGTSPVHDAAR-TGFLDTLKVLVEHG--ADVN-VPDGTGA  102 (156)
T ss_dssp             CCCTTSCCHHHHSC-TTCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-TTCHHHHHHHHHTT--CCSC-CCCTTSC
T ss_pred             ccCCCCCccccccc-cccccccccccccc--cccccc-ccccccccccccc-cccccccccccccc--cccc-cccCCCC
Confidence            34678999999986 58899999999999  888866 6677 99999999 99999999999998  7788 8999999


Q ss_pred             hHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhc
Q 036069           83 ACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSK  137 (174)
Q Consensus        83 ~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~  137 (174)
                      ||||+|+..|+.+++++|+ .+++ ++.+|..|+||||+|+..|+.+++++|+++
T Consensus       103 t~L~~A~~~~~~~i~~~L~-~~~~-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_         103 LPIHLAVQEGHTAVVSFLA-AESD-LHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             CHHHHHHHHTCHHHHHHHH-TTSC-TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             eeecccccccccccccccc-cccc-ccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            9999999999999999888 5677 589999999999999999999999999875

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.91  E-value=2.5e-25  Score=162.83  Aligned_cols=154  Identities=15%  Similarity=0.081  Sum_probs=96.3

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccc-cCCc-cHHHHHHhhCCCHHHHHHHHhcc-chhhhhhhcccCCc
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKI-TGGL-SIFDLIVNSDAPPMFLDKLVSKV-HQNFLQEWVSNEGN   82 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~-~~~~-t~L~~A~~~~g~~~~v~~Ll~~~-~~~~~~~~~d~~g~   82 (174)
                      +.+|.||||+|++.|+.+++++|++.|  ++++... +..| ||||+|+. .|+.+++++|++.+ .+...+ ..+.++.
T Consensus       123 ~~~g~taL~~Aa~~G~~~~v~~Ll~~g--~~~~~~~~~~~g~t~L~~Aa~-~g~~~iv~~Ll~~~~~~~~~~-~~~~~~~  198 (346)
T d2ajaa1         123 QAENYQAFRLAAENGHLHVLNRLCELA--PTEIMAMIQAENYHAFRLAAE-NGHLHVLNRLCELAPTEATAM-IQAENYY  198 (346)
T ss_dssp             CHHHHHHHHHHHHTTCHHHHHHHHHSC--TTTHHHHHSHHHHHHHHHHHH-TTCHHHHHHHHHSCGGGHHHH-HHHHHHH
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHcC--CCccccccccCCCChhHHHHH-HhhHHHHHHHHHcCCcccccc-cccCCCc
Confidence            456777777777777777777777777  5555431 1235 77777777 77777777777765 222233 3444556


Q ss_pred             hHHHHHHhcCCHHHHHHHHHhCCCC--------------------------------CCCCCCC----------------
Q 036069           83 ACMVHAATGGKSKLIEILMRYNPNL--------------------------------PNVRDKS----------------  114 (174)
Q Consensus        83 ~~l~~A~~~~~~~~~~~Ll~~~~~~--------------------------------~~~~~~~----------------  114 (174)
                      +|++.|+..|+.+++++|++.|++.                                .......                
T Consensus       199 t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~  278 (346)
T d2ajaa1         199 AFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFY  278 (346)
T ss_dssp             HHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHH
T ss_pred             chhhHHhhcCHHHHHHHHHhCCCCcchHHHHHHHcCcHhhhHHHHHhhccchHHHHHHHHhcccccHhHHhcccccccch
Confidence            6666677777777777776544211                                0000000                


Q ss_pred             CccHHHHHHhcCChHHHHHHHhcCC-Ccc-----cCCCCcchHHHHHHcCccccc
Q 036069          115 KLLPIHKAAQLGHRDTVRYLLSKTT-AHL-----DGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       115 ~~tpl~~a~~~~~~~~~~~ll~~~~-~~~-----~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      +.++++.++..|+.+++++|++.+. ...     .+.+|.||||+|++.|+.+++
T Consensus       279 ~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v  333 (346)
T d2ajaa1         279 MLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGAC  333 (346)
T ss_dssp             HHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHH
T ss_pred             hhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHH
Confidence            1245556666667777777777665 222     334689999999999999887

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-24  Score=138.34  Aligned_cols=113  Identities=14%  Similarity=0.213  Sum_probs=101.2

Q ss_pred             cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhc
Q 036069           46 SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQL  125 (174)
Q Consensus        46 t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~  125 (174)
                      ++|+.|+. .|+.+++++|++++  .+++ .+|..|+||||+|+..++.+++++|++.+++ ++.+|..|+||||+|+.+
T Consensus         3 ~lL~~A~~-~G~~~~v~~Ll~~g--~d~n-~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~-~~~~d~~g~tpLh~A~~~   77 (130)
T d1ycsb1           3 ALLLDSSL-EGEFDLVQRIIYEV--DDPS-LPNDEGITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASC   77 (130)
T ss_dssp             HHHHHHHH-HTCHHHHHHHTSTT--SSCC-CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHT
T ss_pred             HHHHHHHH-cCCHHHHHHHHHcC--CCcc-ccccccccccccccccccccccccccccccc-cccccccCcccccccchh
Confidence            57899999 99999999999999  8888 9999999999999999999999999999998 599999999999999999


Q ss_pred             CChHHHHHHHhcCC-Ccc-cCCCCcchHHHH--HHcCccccc
Q 036069          126 GHRDTVRYLLSKTT-AHL-DGHDWSTLLKDL--INCNLFGKY  163 (174)
Q Consensus       126 ~~~~~~~~ll~~~~-~~~-~~~~g~t~l~~a--~~~~~~~~~  163 (174)
                      |+.+++++|+++|+ .+. ...++.|++..+  ...|+.+++
T Consensus        78 g~~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv  119 (130)
T d1ycsb1          78 NNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCS  119 (130)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHH
T ss_pred             hHHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHH
Confidence            99999999999998 554 445688887765  456777765

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1e-23  Score=137.43  Aligned_cols=126  Identities=13%  Similarity=0.045  Sum_probs=115.5

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .|.+|.||||.|+ .|+.+++++|++.+  ++++.. +..+ ++++.++. .+..+.++.|++.+  ..++ ..|..|.+
T Consensus        30 ~d~~g~TpL~~A~-~~~~ei~~~Ll~~~--a~~~~~-~~~~~~~l~~~~~-~~~~~~~~~l~~~~--~~~~-~~~~~~~~  101 (156)
T d1ihba_          30 QNGFGRTALQVMK-LGNPEIARRLLLRG--ANPDLK-DRTGFAVIHDAAR-AGFLDTLQTLLEFQ--ADVN-IEDNEGNL  101 (156)
T ss_dssp             CCTTSCCHHHHCC-SSCHHHHHHHHHTT--CCTTCC-CTTSCCHHHHHHH-HTCHHHHHHHHHTT--CCTT-CCCTTSCC
T ss_pred             cCCcccccccccc-cccccccccccccc--cccccc-cccCccccccccc-cccccccccccccc--cccc-cccccccc
Confidence            4678999999885 79999999999999  888866 7777 99999999 99999999999988  6677 88899999


Q ss_pred             HHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcC
Q 036069           84 CMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKT  138 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~  138 (174)
                      |+|+|+..++.+++++|+++++...+.+|..|.||||+|+..|+.+++++|+++|
T Consensus       102 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_         102 PLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             ccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            9999999999999999999988546889999999999999999999999999876

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.2e-22  Score=131.90  Aligned_cols=123  Identities=11%  Similarity=0.091  Sum_probs=110.8

Q ss_pred             cccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCc
Q 036069            4 ITDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGN   82 (174)
Q Consensus         4 ~~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~   82 (174)
                      ..+..|.||||.|+..++.++++.++...  ...... ...+ ++++.++. ..+.+++++++..+  .+.. .+|..|.
T Consensus        29 ~~~~~g~t~L~~a~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~l~~~~--~~~~-~~~~~g~  101 (153)
T d1awcb_          29 TTDWLGTSPLHLAAQYGHFSTTEVLLRAG--VSRDAR-TKVDRTPLHMAAS-EGHANIVEVLLKHG--ADVN-AKDMLKM  101 (153)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHTTT--CCTTCC-CTTCCCHHHHHHH-HTCHHHHHHHHTTT--CCTT-CCCTTSC
T ss_pred             ccccCCCcccccccccccccccccccccc--cccccc-ccccccccccccc-cccceeeecccccC--Cccc-cccccCc
Confidence            35778999999999999999999999887  444434 4555 89999999 99999999999998  7777 8999999


Q ss_pred             hHHHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHH
Q 036069           83 ACMVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYL  134 (174)
Q Consensus        83 ~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~l  134 (174)
                      ||||+|+..|+.+++++|++.|++ ++.+|..|.|||++|+..|+.+++++|
T Consensus       102 T~L~~A~~~g~~~iv~~ll~~gad-~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_         102 TALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             hHHHhhhhcchhheeeeccccccC-CcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            999999999999999999999999 599999999999999999999999976

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.89  E-value=9.8e-25  Score=159.69  Aligned_cols=128  Identities=15%  Similarity=0.142  Sum_probs=105.8

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHH---HHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcc--
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEE---YIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVS--   78 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~---ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d--   78 (174)
                      .+..|.|||++|+++|+.++++.   |++.+  ++++.. +..| ||||+|++ .|+.++|++|++.+  ++++ ..+  
T Consensus        86 ~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~--~~in~~-~~~g~taL~~Aa~-~G~~~~v~~Ll~~g--~~~~-~~~~~  158 (346)
T d2ajaa1          86 KGIKSEVICFVAAITGCSSALDTLCLLLTSD--EIVKVI-QAENYQAFRLAAE-NGHLHVLNRLCELA--PTEI-MAMIQ  158 (346)
T ss_dssp             HTCCHHHHHHHHHHHCCHHHHHHHTTC--CC--SSCC---CHHHHHHHHHHHH-TTCHHHHHHHHHSC--TTTH-HHHHS
T ss_pred             ccCCCCcHHHHHHHhCCHHHHHHHHHHHhCC--Cccccc-CCCCCCHHHHHHH-CCCHHHHHHHHHcC--CCcc-ccccc
Confidence            35679999999999999887765   67887  889866 7788 99999999 99999999999998  6666 555  


Q ss_pred             cCCchHHHHHHhcCCHHHHHHHHHhCCCC--CCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           79 NEGNACMVHAATGGKSKLIEILMRYNPNL--PNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        79 ~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~--~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      ..|.||||+|+..|+.+++++|++.++..  .+..+..+.||++.|+..|+.+++++|++.|+
T Consensus       159 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga  221 (346)
T d2ajaa1         159 AENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV  221 (346)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred             cCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCC
Confidence            46999999999999999999999988752  12334556788888999999999999999876

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.2e-22  Score=140.62  Aligned_cols=133  Identities=9%  Similarity=0.008  Sum_probs=112.7

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHh---hCCCHHHHHHHHhccchhhhhhhcccCC
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVN---SDAPPMFLDKLVSKVHQNFLQEWVSNEG   81 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~---~~g~~~~v~~Ll~~~~~~~~~~~~d~~g   81 (174)
                      +..|.||||.|++.|+.+++++|++.. .++++.. +..+ ++++.+..   ..+..+++++|++.+  ++++ .+|..|
T Consensus       145 ~~~g~t~L~~A~~~~~~~~~~~Ll~~~-~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~g--a~~n-~~~~~g  219 (285)
T d1wdya_         145 RKGGATALMDAAEKGHVEVLKILLDEM-GADVNAC-DNMGRNALIHALLSSDDSDVEAITHLLLDHG--ADVN-VRGERG  219 (285)
T ss_dssp             TCCCCCHHHHHHHHTCHHHHHHHHHTS-CCCTTCC-CTTSCCHHHHHHHCSCTTTHHHHHHHHHHTT--CCSS-CCCTTS
T ss_pred             cccCchHHHHHHHcCCHHHHHHHHhcc-CCCcccc-cCCCCcccccccccccchHHHHHHHHHHHCC--CCCC-ccCCCC
Confidence            345899999999999999999999875 5788866 6666 66655433   033457999999998  7788 899999


Q ss_pred             chHHHHHHhcCCHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC-CcccC
Q 036069           82 NACMVHAATGGKSKLIEILMRY-NPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT-AHLDG  144 (174)
Q Consensus        82 ~~~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~-~~~~~  144 (174)
                      .||||+|+..|+.+++++|++. +.+ ++.+|..|.||||+|+..|+.+++++|+++|+ .+.+|
T Consensus       220 ~t~L~~a~~~~~~~~v~~lL~~~g~d-in~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d  283 (285)
T d1wdya_         220 KTPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHSSSCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             CCccchhhhcCcHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccc
Confidence            9999999999999999999985 666 69999999999999999999999999999999 65543

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.88  E-value=4.9e-22  Score=140.21  Aligned_cols=127  Identities=12%  Similarity=0.092  Sum_probs=109.6

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhcc-chhhhhh-------
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKV-HQNFLQE-------   75 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~-~~~~~~~-------   75 (174)
                      .|.+|.||||+|+..|+.+++++|+++|  ++++.. +..| |+|++|+. .++.++++.+.... ....++.       
T Consensus        70 ~d~~G~TpLh~A~~~g~~~iv~~Ll~~G--ad~n~~-~~~g~t~l~~a~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  145 (277)
T d2fo1e1          70 MDCDENTPLMLAVLARRRRLVAYLMKAG--ADPTIY-NKSERSALHQAAA-NRDFGMMVYMLNSTKLKGDIEELDRNGMT  145 (277)
T ss_dssp             CCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCSCCC-CTTCCCHHHHHHH-TTCHHHHHHHTTSHHHHHTTSCCCTTSCC
T ss_pred             cCCCCCeeeccccccccccccccccccc--cccccc-cccccccccchhh-hcchhhhhhhhhcccccccccccccccch
Confidence            5678999999999999999999999999  999876 7788 99999999 99988877775543 0000000       


Q ss_pred             ----------------------------------------------------------------------hcccCCchHH
Q 036069           76 ----------------------------------------------------------------------WVSNEGNACM   85 (174)
Q Consensus        76 ----------------------------------------------------------------------~~d~~g~~~l   85 (174)
                                                                                            .+|..|.|||
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL  225 (277)
T d2fo1e1         146 ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI  225 (277)
T ss_dssp             HHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHH
T ss_pred             hHHHHHhcccccccccccccccccccccccccccccccccCCCCccccccccccccccccccccccccccccCCCCCCHH
Confidence                                                                                  3577899999


Q ss_pred             HHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHh
Q 036069           86 VHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLS  136 (174)
Q Consensus        86 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~  136 (174)
                      |+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|.+
T Consensus       226 ~~A~~~g~~~iv~~Ll~~gad-in~~d~~G~T~L~~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         226 MLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFDR  275 (277)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             HHHHHcCCHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            999999999999999999999 59999999999999999999999999875

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=1.2e-21  Score=127.52  Aligned_cols=114  Identities=11%  Similarity=-0.006  Sum_probs=97.9

Q ss_pred             HHHHHHhhCCCHHHHHHHHhccchhhhhh-----hcccCCchHHHHHHhc---CCHHHHHHHHHhCCCCCCCCCCCCccH
Q 036069           47 IFDLIVNSDAPPMFLDKLVSKVHQNFLQE-----WVSNEGNACMVHAATG---GKSKLIEILMRYNPNLPNVRDKSKLLP  118 (174)
Q Consensus        47 ~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~-----~~d~~g~~~l~~A~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~tp  118 (174)
                      .|..|++ .++...+..++..+  .++..     ..+..|.||||+|+..   ++.+++++|+++|++ ++.+|..|+||
T Consensus         9 ~L~~Av~-~~dl~~l~~~~~~g--~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-in~~d~~g~Tp   84 (154)
T d1dcqa1           9 SLCEAVK-TRDIFGLLQAYADG--VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTA   84 (154)
T ss_dssp             HHHHHHH-TTCHHHHHHHHHTT--CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCH
T ss_pred             HHHHHHH-hCCHHHHHHHHHcC--CCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCC-hhhhhhhhccc
Confidence            4567889 99998888888776  33320     2356799999999964   678999999999999 59999999999


Q ss_pred             HHHHHhcCChHHHHHHHhcCC-CcccCCCCcchHHHHHHcCcccccc
Q 036069          119 IHKAAQLGHRDTVRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       119 l~~a~~~~~~~~~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                      ||+|+..|+.+++++|+++|+ .+.++.+|.|||++|++.|+.+++-
T Consensus        85 Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~  131 (154)
T d1dcqa1          85 LHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEE  131 (154)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             cccccccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            999999999999999999999 7779999999999999999988763

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=3.8e-21  Score=132.29  Aligned_cols=125  Identities=12%  Similarity=0.121  Sum_probs=111.2

Q ss_pred             ccchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCch
Q 036069            5 TDIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNA   83 (174)
Q Consensus         5 ~~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~   83 (174)
                      .+..+.++++.++..++.++++.|++.+  ...+.. +..| ||||+|+. .|+.+++++|++.+ +.+++ .+|..|.|
T Consensus       101 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~--~~~~~~-~~~g~t~l~~a~~-~~~~~~~~~Ll~~~-~~~in-~~d~~g~T  174 (229)
T d1ixva_         101 ITNQGVTCLHLAVGKKWFEVSQFLIENG--ASVRIK-DKFNQIPLHRAAS-VGSLKLIELLCGLG-KSAVN-WQDKQGWT  174 (229)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCSCCC-CTTSCCHHHHHHH-HTCHHHHHHHHTTT-CCCSC-CCCTTSCC
T ss_pred             cccccccccccccccchhhhhhhhhhhc--cccccc-CCCCCCccchhhh-cccccccccccccc-ccccc-ccccccCC
Confidence            3456889999999999999999999998  677655 7788 99999999 99999999999986 35567 88999999


Q ss_pred             HHHHHHhcCCHHHHHHHHH-hCCCCCCCCCCCCccHHHHHHhcCChHHHHHHHhcCC
Q 036069           84 CMVHAATGGKSKLIEILMR-YNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYLLSKTT  139 (174)
Q Consensus        84 ~l~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~ll~~~~  139 (174)
                      |||+|+..|+.+++++|++ .|++ ++.+|..|+|||++|+.   .+++++|+++|+
T Consensus       175 pLh~A~~~~~~~~v~~Ll~~~gad-~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~  227 (229)
T d1ixva_         175 PLFHALAEGHGDAAVLLVEKYGAE-YDLVDNKGAKAEDVALN---EQVKKFFLNNVV  227 (229)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHCCC-SCCCCTTSCCTGGGCSC---HHHHHHHHHHCC
T ss_pred             chhhhcccccHHHHHHHHHhcCCC-CCCcCCCCCCHHHHHhh---HHHHHHHHHcCC
Confidence            9999999999999999997 5888 59999999999999985   589999999886

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.84  E-value=1.4e-20  Score=127.71  Aligned_cols=121  Identities=15%  Similarity=0.083  Sum_probs=109.9

Q ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchH
Q 036069            6 DIDSVMQVTRYILKNDWKDLEEYIMSKTSNTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNAC   84 (174)
Q Consensus         6 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~   84 (174)
                      ...+.++.+.+.........+.|...+  .+++.. +..| |+|++++. .+..++++.+++.+  .+++ ..|..|.||
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~L~~~~--~~~~~~-~~~~~t~l~~~~~-~~~~~~~~~l~~~~--~~~~-~~d~~g~Tp  159 (209)
T d1ot8a_          87 MHDGTTPLILAARLAIEGMVEDLITAD--ADINAA-DNSGKTALHWAAA-VNNTEAVNILLMHH--ANRD-AQDDKDETP  159 (209)
T ss_dssp             CTTCCCHHHHHHHTTCTTHHHHHHHTT--CCTTCB-CTTSCBHHHHHHH-TTCHHHHHHHHHTT--CCTT-CCCTTCCCH
T ss_pred             cccccccccccccccchhhhhhhhhhc--cccccc-CCCCCCcchhhcc-cCcceeeeeecccc--cccc-ccccccccc
Confidence            345777888888888888888888888  888766 7778 99999999 99999999999998  7788 899999999


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhcCChHHHHHH
Q 036069           85 MVHAATGGKSKLIEILMRYNPNLPNVRDKSKLLPIHKAAQLGHRDTVRYL  134 (174)
Q Consensus        85 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~tpl~~a~~~~~~~~~~~l  134 (174)
                      ||+|+..|+.+++++|++.|++ ++.+|..|.||||+|++.|+.++|++|
T Consensus       160 L~~A~~~g~~~~v~~Ll~~gad-~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         160 LFLAAREGSYEASKALLDNFAN-REITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             cchhccccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            9999999999999999999999 599999999999999999999999986

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.1e-19  Score=122.02  Aligned_cols=118  Identities=15%  Similarity=0.068  Sum_probs=101.9

Q ss_pred             Cc-cHHHHHHhhCCCHHHHHHHHhcc--chhhhhhhcccCCchHHHHHHhcCCHHHHHHHHHhCCCC-------------
Q 036069           44 GL-SIFDLIVNSDAPPMFLDKLVSKV--HQNFLQEWVSNEGNACMVHAATGGKSKLIEILMRYNPNL-------------  107 (174)
Q Consensus        44 ~~-t~L~~A~~~~g~~~~v~~Ll~~~--~~~~~~~~~d~~g~~~l~~A~~~~~~~~~~~Ll~~~~~~-------------  107 (174)
                      .| ||||+|+. .|+.++++.|++..  ...+++ .+|..|.||||+|+..|+.+++++|++.++..             
T Consensus         2 dG~TpLh~A~~-~g~~~~v~~Ll~~~~~~g~~in-~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~   79 (228)
T d1k1aa_           2 DGDTPLHIAVV-QGNLPAVHRLVNLFQQGGRELD-IYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHL   79 (228)
T ss_dssp             TTCCHHHHHHH-TTCHHHHHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             CCccHHHHHHH-cCCHHHHHHHHHHHHHCCCCCC-ccCCCCCccceehhccccccccccccccccccccccccccccccc
Confidence            47 99999999 99999999998632  126677 88999999999999999999999999988665             


Q ss_pred             ---------------------------------------------------------CCCCCCCCccHHHHHHhcCChHH
Q 036069          108 ---------------------------------------------------------PNVRDKSKLLPIHKAAQLGHRDT  130 (174)
Q Consensus       108 ---------------------------------------------------------~~~~~~~~~tpl~~a~~~~~~~~  130 (174)
                                                                               ....+..+.+|++.|+..+..++
T Consensus        80 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~  159 (228)
T d1k1aa_          80 ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSM  159 (228)
T ss_dssp             HHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred             ccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhh
Confidence                                                                     22345578899999999999999


Q ss_pred             HHHHHhcCC-CcccCCCCcchHHHHHHcCccccc
Q 036069          131 VRYLLSKTT-AHLDGHDWSTLLKDLINCNLFGKY  163 (174)
Q Consensus       131 ~~~ll~~~~-~~~~~~~g~t~l~~a~~~~~~~~~  163 (174)
                      ++++++.+. ...++..|.|||++|+..|+.+++
T Consensus       160 ~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v  193 (228)
T d1k1aa_         160 VQLLLQHGANVNAQMYSGSSALHSASGRGLLPLV  193 (228)
T ss_dssp             HHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHH
T ss_pred             hhhhhhhccccccccccCcchHHHHHHcCCHHHH
Confidence            999999988 666889999999999999998876

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=9.7e-20  Score=130.49  Aligned_cols=122  Identities=13%  Similarity=0.103  Sum_probs=92.3

Q ss_pred             ccccccccCCc-cHHHHHHhhCCCHHHHHHHHhccchhhhhhhcccCCchHHHHHHhcCCH-------HHHHHHHHhCCC
Q 036069           35 NTLTDKITGGL-SIFDLIVNSDAPPMFLDKLVSKVHQNFLQEWVSNEGNACMVHAATGGKS-------KLIEILMRYNPN  106 (174)
Q Consensus        35 ~~~~~~~~~~~-t~L~~A~~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~~~l~~A~~~~~~-------~~~~~Ll~~~~~  106 (174)
                      .+++...|..| ||||+|+. .|+.++|++|++.+  ++++ .+|..|+||||.|+..++.       ++++++..   .
T Consensus        97 ~dvn~~~D~~G~T~LH~Aa~-~g~~~~v~~Ll~~g--ad~~-~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~---~  169 (301)
T d1sw6a_          97 LNLNIPVDEHGNTPLHWLTS-IANLELVKHLVKHG--SNRL-YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP---C  169 (301)
T ss_dssp             CCSCSCCSTTCCCHHHHHHH-TTCHHHHHHHHHTT--CCTT-BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---G
T ss_pred             CCcCcCcCCCCCCHHHHHHH-cCCHHHHHHHHHCC--CCCC-cCCcccccHHHHhhhcccchhhhhHHHHHHHHhh---h
Confidence            56676667888 99999999 99999999999999  8888 9999999999999987752       33444432   2


Q ss_pred             CCCCCCCCCccHHHHHHhcCC----hHHH--------HHHHhcCC-----------------------------------
Q 036069          107 LPNVRDKSKLLPIHKAAQLGH----RDTV--------RYLLSKTT-----------------------------------  139 (174)
Q Consensus       107 ~~~~~~~~~~tpl~~a~~~~~----~~~~--------~~ll~~~~-----------------------------------  139 (174)
                       ...+|..|+||+|+++..+.    ...+        .++...+.                                   
T Consensus       170 -~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (301)
T d1sw6a_         170 -LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWII  248 (301)
T ss_dssp             -GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHH
T ss_pred             -hhhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHH
Confidence             36678899999998886543    2222        23333222                                   


Q ss_pred             ---CcccCCCCcchHHHHHHcCcccccc
Q 036069          140 ---AHLDGHDWSTLLKDLINCNLFGKYY  164 (174)
Q Consensus       140 ---~~~~~~~g~t~l~~a~~~~~~~~~~  164 (174)
                         .+.+|.+|.||||+|++.|+.+++.
T Consensus       249 ~~~in~~D~~G~TpLh~A~~~g~~~iv~  276 (301)
T d1sw6a_         249 ANMLNAQDSNGDTCLNIAARLGNISIVD  276 (301)
T ss_dssp             HHTTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred             hcCccCCCCCCCCHHHHHHHcCCHHHHH
Confidence               1235788999999999999988774