Citrus Sinensis ID: 036076
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 294 | ||||||
| 224060435 | 460 | predicted protein [Populus trichocarpa] | 0.989 | 0.632 | 0.435 | 6e-67 | |
| 225466441 | 436 | PREDICTED: vinorine synthase-like [Vitis | 0.976 | 0.658 | 0.401 | 7e-49 | |
| 224132744 | 438 | predicted protein [Populus trichocarpa] | 0.986 | 0.662 | 0.344 | 4e-48 | |
| 224134450 | 431 | predicted protein [Populus trichocarpa] | 0.976 | 0.665 | 0.382 | 6e-48 | |
| 224089953 | 439 | predicted protein [Populus trichocarpa] | 0.979 | 0.656 | 0.360 | 2e-46 | |
| 224136714 | 434 | predicted protein [Populus trichocarpa] | 0.986 | 0.668 | 0.355 | 2e-46 | |
| 224089949 | 439 | predicted protein [Populus trichocarpa] | 0.979 | 0.656 | 0.357 | 8e-46 | |
| 297744686 | 1550 | unnamed protein product [Vitis vinifera] | 0.972 | 0.184 | 0.383 | 9e-45 | |
| 147781881 | 429 | hypothetical protein VITISV_038783 [Viti | 0.965 | 0.662 | 0.381 | 1e-44 | |
| 224126711 | 440 | predicted protein [Populus trichocarpa] | 0.959 | 0.640 | 0.348 | 2e-44 |
| >gi|224060435|ref|XP_002300198.1| predicted protein [Populus trichocarpa] gi|222847456|gb|EEE85003.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 143/328 (43%), Positives = 191/328 (58%), Gaps = 37/328 (11%)
Query: 1 NERLELMENSLSETLITFYPLAGRFIEDRTFVDCNDQGAEYLIAQLEAEL---------- 50
+ R +E SLSETL +YPLAGR+IEDR VDCND GA +L A++ L
Sbjct: 57 DNRFNRLEKSLSETLACYYPLAGRYIEDRNMVDCNDDGALFLEAKVSGHLAQLDLQGAVD 116
Query: 51 ---WNRFILFAKEVVAFSPTVLAVQLNMFDCGGLAIGVPLSHKVADGFVIFTFFQAWAAA 107
NRF+ F E+ AFSP VLAVQ+N FDCGGL IGV +SH+VADG + F +AWA A
Sbjct: 117 VKSLNRFVPFGDEM-AFSPIVLAVQINKFDCGGLVIGVCISHRVADGHTMGAFLKAWATA 175
Query: 108 CRFGNTTEVVTCPSFEMGSLLLARDTDKLKIPVPEEYGVTMVTKRFVFDELAISTLKAKA 167
CR G E++ PSF+ G+L A D + PVP ++G +VTKRFVFD IS+LKAK
Sbjct: 176 CRAG-MHEMIR-PSFDAGALFPATDVLRFGTPVPRDHGSQIVTKRFVFDGEKISSLKAKV 233
Query: 168 KAIGE-------VSRVVVMTAVLWKARILVVQAKHGLLWPSLLNISYNLQRKTGVI---- 216
+ SRV V+TA+LWKA I V QAKHG L PSLL + NL+ K ++
Sbjct: 234 MSYARDSDVKRPPSRVEVVTALLWKALIGVAQAKHGKLRPSLLTLPLNLRGKVDLLITEN 293
Query: 217 ----------ARFKTSECKLDFNDSAALLGNSIRETAADCLKTEDADDLFTLMISSMTEI 266
RF E + + +LL +++ + DC + ++DD+ ++ +SM EI
Sbjct: 294 SFGNLYRMVGVRFNPKESSSEMHHLVSLLNDAVNKANKDCEQVVNSDDVIAMVSNSMEEI 353
Query: 267 HEILEKNETDICVFTSVCGFPYYEVDFG 294
H + DICV S C FP+Y++DFG
Sbjct: 354 HNGARNGDLDICVVPSWCKFPFYQIDFG 381
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225466441|ref|XP_002266054.1| PREDICTED: vinorine synthase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224132744|ref|XP_002327870.1| predicted protein [Populus trichocarpa] gi|222837279|gb|EEE75658.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224134450|ref|XP_002321827.1| predicted protein [Populus trichocarpa] gi|222868823|gb|EEF05954.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224089953|ref|XP_002308879.1| predicted protein [Populus trichocarpa] gi|222854855|gb|EEE92402.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224136714|ref|XP_002322397.1| predicted protein [Populus trichocarpa] gi|222869393|gb|EEF06524.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224089949|ref|XP_002308878.1| predicted protein [Populus trichocarpa] gi|222854854|gb|EEE92401.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|297744686|emb|CBI37948.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147781881|emb|CAN69939.1| hypothetical protein VITISV_038783 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224126711|ref|XP_002329454.1| predicted protein [Populus trichocarpa] gi|222870134|gb|EEF07265.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 294 | ||||||
| TAIR|locus:2102936 | 443 | AT3G30280 [Arabidopsis thalian | 0.598 | 0.397 | 0.36 | 6.2e-26 | |
| TAIR|locus:2130065 | 446 | AT4G15390 [Arabidopsis thalian | 0.598 | 0.394 | 0.351 | 1.3e-24 | |
| TAIR|locus:2092090 | 442 | AT3G26040 [Arabidopsis thalian | 0.710 | 0.472 | 0.317 | 1.3e-24 | |
| TAIR|locus:2024061 | 436 | AT1G24420 [Arabidopsis thalian | 0.928 | 0.626 | 0.32 | 5.9e-24 | |
| TAIR|locus:2024036 | 435 | AT1G24430 [Arabidopsis thalian | 0.955 | 0.645 | 0.290 | 4.8e-23 | |
| TAIR|locus:2152783 | 426 | AT5G47950 [Arabidopsis thalian | 0.938 | 0.647 | 0.314 | 3.8e-18 | |
| TAIR|locus:2152763 | 443 | AT5G47980 [Arabidopsis thalian | 0.598 | 0.397 | 0.290 | 3.4e-14 | |
| TAIR|locus:2130075 | 435 | BIA1 "BRASSINOSTEROID INACTIVA | 0.945 | 0.639 | 0.271 | 7.2e-14 | |
| TAIR|locus:2178667 | 428 | AT5G23970 [Arabidopsis thalian | 0.972 | 0.668 | 0.244 | 1.2e-13 | |
| TAIR|locus:2207410 | 455 | AT1G78990 [Arabidopsis thalian | 0.853 | 0.551 | 0.252 | 2e-09 |
| TAIR|locus:2102936 AT3G30280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 262 (97.3 bits), Expect = 6.2e-26, Sum P(2) = 6.2e-26
Identities = 72/200 (36%), Positives = 109/200 (54%)
Query: 7 MENSLSETLITFYPLAGRFIEDRTFVDCNDQGAEYLIAQLEAELWNRFI----------L 56
++ SL+ETL FYPLAGR I+ T +DCND+GA ++ A++ + F+ L
Sbjct: 62 LKTSLAETLTKFYPLAGR-IKGVT-IDCNDEGAVFVDARVNNYPLSDFLRSPDFKTLQQL 119
Query: 57 FAKEVV------AFSPTVLAVQLNMFDCGGLAIGVPLSHKVADGFVIFTFFQAWAAACRF 110
+V+ A + +L V+ F CGG+AIG+ ++HK+AD I TF Q+WAA R
Sbjct: 120 LPLDVIDDPYEAATTWPLLLVKATYFPCGGMAIGLCITHKIADATSISTFIQSWAAMAR- 178
Query: 111 GNTTEVVTCPSFEMGSLLLARDTDKLKIPVPEEYG-VTMVTKRFVFDELAISTLKAKAKA 169
G ++V P F + + + K PV E ++ +TKRFVF + L+ KA +
Sbjct: 179 GEAGDIVADPVFAAANFYPPAN-ELFKFPVDENANKISQITKRFVFSASKLEELRTKAAS 237
Query: 170 ---IGEVSRVVVMTAVLWKA 186
+G RV +TA+LWKA
Sbjct: 238 EDFVGRPKRVESVTALLWKA 257
|
|
| TAIR|locus:2130065 AT4G15390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2092090 AT3G26040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2024061 AT1G24420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2024036 AT1G24430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2152783 AT5G47950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2152763 AT5G47980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130075 BIA1 "BRASSINOSTEROID INACTIVATOR1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178667 AT5G23970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2207410 AT1G78990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 294 | |||
| pfam02458 | 432 | pfam02458, Transferase, Transferase family | 3e-42 | |
| PLN00140 | 444 | PLN00140, PLN00140, alcohol acetyltransferase fami | 2e-41 | |
| PLN02663 | 431 | PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate | 7e-17 | |
| PLN02481 | 436 | PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul | 3e-16 | |
| PLN03157 | 447 | PLN03157, PLN03157, spermidine hydroxycinnamoyl tr | 2e-14 |
| >gnl|CDD|217048 pfam02458, Transferase, Transferase family | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 3e-42
Identities = 93/337 (27%), Positives = 147/337 (43%), Gaps = 56/337 (16%)
Query: 4 LELMENSLSETLITFYPLAGRFIE--DRTFVDCNDQGAEYLIAQLEAELWNRFILFAKEV 61
E ++ SLSETL+++YPLAGR R +DCND+GA+++ A+ + EL + F+
Sbjct: 55 SEKLKTSLSETLVSYYPLAGRLRSPGGRLEIDCNDEGADFVEARADVEL-SDFLDGEDPD 113
Query: 62 VAF--------------SPTVLAVQLNMFDCGGLAIGVPLSHKVADGFVIFTFFQAWAAA 107
+ + +LAVQ+ F CGG AIG ++H +ADG+ + TF +WA
Sbjct: 114 DSLELLLPDLAVSSEGENWPLLAVQVTKFKCGGFAIGCSVNHAIADGYSLSTFMNSWAEL 173
Query: 108 CRFGNTTEVVTCPSFEMGSLLLARDTDKLKIPVPEEYGVT---------MVTKRFVFDEL 158
R G VT P F LLL R+ ++K E +V+K FVF++L
Sbjct: 174 AR-GGKKPSVT-PVFR-RELLLPRNPPQVKFDHHEFDIFPPEPITTLDEVVSKSFVFEKL 230
Query: 159 AISTL-KAKAKAIGE-----VSRVVVMTAVLWKARILVVQAKHGLLWPSLLNISYNLQRK 212
+IS L K K KA +R V+TA+LW+ K ++L + N++ +
Sbjct: 231 SISALEKLKTKANSSSNGKPRTRFEVVTALLWRCA--TKARKLDPEEETVLGQAVNIRSR 288
Query: 213 T-----------GVIARFKTSECK----LDFNDSAALLGNSIRETAADCLKTEDADDLFT 257
+ S A L+ + ++ D D +
Sbjct: 289 LNPPLPPGYFGNAYFSVVAKSTAAELESNPLGWIAELVKEAKKKVIDDEYLESVID--WV 346
Query: 258 LMISSMTEIHEILEKNETDICVFTSVCGFPYYEVDFG 294
+ +E + + +S C FP+YEVDFG
Sbjct: 347 ENSLPLKGFYEG--TKDDPAFLVSSWCRFPFYEVDFG 381
|
This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis. Deacetylvindoline 4-O-acetyltransferase EC:2.3.1.107 catalyzes the last step in vindoline biosynthesis is also a member of this family. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase. Length = 432 |
| >gnl|CDD|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 294 | |||
| PLN00140 | 444 | alcohol acetyltransferase family protein; Provisio | 100.0 | |
| PLN03157 | 447 | spermidine hydroxycinnamoyl transferase; Provision | 100.0 | |
| PLN02481 | 436 | Omega-hydroxypalmitate O-feruloyl transferase | 100.0 | |
| PLN02663 | 431 | hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn | 100.0 | |
| PF02458 | 432 | Transferase: Transferase family; InterPro: IPR0034 | 100.0 | |
| PRK09294 | 416 | acyltransferase PapA5; Provisional | 98.96 | |
| COG4908 | 439 | Uncharacterized protein containing a NRPS condensa | 98.11 | |
| PF00668 | 301 | Condensation: Condensation domain; InterPro: IPR00 | 98.03 | |
| PF07247 | 480 | AATase: Alcohol acetyltransferase; InterPro: IPR01 | 97.62 | |
| TIGR02946 | 446 | acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b | 97.49 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 97.12 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 97.11 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 96.91 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 96.84 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 96.71 | |
| PRK05691 | 4334 | peptide synthase; Validated | 96.36 | |
| PRK05691 | 4334 | peptide synthase; Validated | 96.25 | |
| PF03007 | 263 | WES_acyltransf: Wax ester synthase-like Acyl-CoA a | 95.37 | |
| PRK13757 | 219 | chloramphenicol acetyltransferase; Provisional | 80.05 |
| >PLN00140 alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-59 Score=442.81 Aligned_cols=289 Identities=29% Similarity=0.462 Sum_probs=225.4
Q ss_pred hhHHHHHHHHHHhchhccCCCCccccCceEEEecCCCceEEEEEecH-----------hhhhccccCccc---cccCCCc
Q 036076 2 ERLELMENSLSETLITFYPLAGRFIEDRTFVDCNDQGAEYLIAQLEA-----------ELWNRFILFAKE---VVAFSPT 67 (294)
Q Consensus 2 ~~~~~Lk~sLs~~L~~~~~laGr~~~~~~~i~~~~~gv~f~~a~~d~-----------~~l~~l~P~~~~---~~~~~~P 67 (294)
+++++||+|||++|++||||||| ++.+++|+|||+||.|+||+++. ..+++|+|..+. ....+.|
T Consensus 56 ~~~~~Lk~sLs~~L~~fyplAGR-l~~~~~i~cn~~Gv~fveA~~~~~l~d~l~~~~~~~~~~l~p~~~~~~~~~~~~~P 134 (444)
T PLN00140 56 QISIQLKRSLSETLSTFYPFSGR-VKDNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLPCQPFSYESDPEAIP 134 (444)
T ss_pred hHHHHHHHHHHHHHhhhhccCcc-ccCCceeEccCCCceEEEEEecCcHHHhcCCCCHHHHHhhCCCCcccccCCccCCc
Confidence 46799999999999999999999 77789999999999999999841 234556765421 1224579
Q ss_pred eEEEEEEEeecCeEEEecccccccchhhHHHHHHHHHHHHHhcCCCCCCccCCCCCCC-CcccCCCCCCCCC----CCCC
Q 036076 68 VLAVQLNMFDCGGLAIGVPLSHKVADGFVIFTFFQAWAAACRFGNTTEVVTCPSFEMG-SLLLARDTDKLKI----PVPE 142 (294)
Q Consensus 68 ll~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r~g~~~~~~~~P~~dr~-~l~~~~~~p~~~~----~~~~ 142 (294)
+++||||+|+|||++||+++||+++||.|+++|+++||++|| |.. .+...|.+||. .++|++..+.... +..+
T Consensus 135 ll~vQvT~F~cGG~~lG~~~~H~v~Dg~s~~~Fl~~WA~~~r-g~~-~~~~~P~~dr~~~~~p~~~~~~~~~~~~~~~~~ 212 (444)
T PLN00140 135 QVAIQVNTFDCGGIALGLCFSHKIIDAATASAFLDSWAANTR-GHY-SEVINPDLFEASSFFPPLNSFPVQFLLLMEENW 212 (444)
T ss_pred eEEEEEEEeccCcEEEEeeeceEcccHHHHHHHHHHHHHHhc-CCC-CCCCCcccccccccCCCCCcccccccccccccc
Confidence 999999999999999999999999999999999999999999 875 34567999986 3455543222111 1112
Q ss_pred CCCcceEEEEEEEcHHHHHHHHHHHc-c-CCCCCeehhHHHHHHHHHHHHhccccCCCCceEEEEEeeCccccc------
Q 036076 143 EYGVTMVTKRFVFDELAISTLKAKAK-A-IGEVSRVVVMTAVLWKARILVVQAKHGLLWPSLLNISYNLQRKTG------ 214 (294)
Q Consensus 143 ~~~~~~~~~~f~f~~~~i~~Lk~~~~-~-~~~~S~~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~------ 214 (294)
....+++.++|+|++++|++||+++. . ..++|++|+|+||+|+|++||+....+.++.+.+.++||+|+|++
T Consensus 213 ~~~~~~v~~~f~fs~~~I~~LK~~~~~~~~~~~S~~e~vsA~iWr~~~rA~~~~~~~~~~~~~~~~vn~R~Rl~PpLP~~ 292 (444)
T PLN00140 213 FFKENYITKRFVFDAKAIATLRAKAKSKRVPNPSRIETLSCFIWKCCTAASRSISAAPRPSISVHAVNIRQRTKPPMSRY 292 (444)
T ss_pred cccCceEEEEEEECHHHHHHHHHhcccccCCCCchhHHHHHHHHHHHHHHhhhccCCCCceEEEEEEeccccCCCCCCcc
Confidence 23457899999999999999999987 3 357999999999999999999754322246789999999999997
Q ss_pred cceeec--------cccccCcHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHHHHHHHhhhcccCCCCeEEEcccCCC
Q 036076 215 VIARFK--------TSECKLDFNDSAALLGNSIRETAADCLKTEDADDLFTLMISSMTEIHEILEKNETDICVFTSVCGF 286 (294)
Q Consensus 215 ~~~~~~--------~~~~~~~l~~~A~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~ 286 (294)
|+||+. .++...+|.++|..||++++++|++|+++.++...+. .+.+|++..+.......+.+.+|||+||
T Consensus 293 y~GN~i~~~~~~~~~~~~~~~l~~~a~~Ir~~i~~~~~e~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vssw~r~ 371 (444)
T PLN00140 293 SIGNLFWWALAAADPADTKIELNELVSLTRESIANYNSDYLKSLQGENGLE-GMSEYLNQLVGIFSEEPEIFLFSSWLNF 371 (444)
T ss_pred cccchhhhheecccccccccchHHHHHHHHHHHHHHHHHHHHHhccchhHH-HHHHHHHHHhhcccCCCceEEecccccC
Confidence 999964 2234688999999999999999999999988743211 1122443332221123455689999999
Q ss_pred CCCcCCCC
Q 036076 287 PYYEVDFG 294 (294)
Q Consensus 287 ~~y~~DFG 294 (294)
++||+|||
T Consensus 372 ~~ye~DFG 379 (444)
T PLN00140 372 GLNDVDFG 379 (444)
T ss_pred CccccccC
Confidence 99999999
|
|
| >PLN03157 spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
| >PLN02481 Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
| >PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes | Back alignment and domain information |
|---|
| >PRK09294 acyltransferase PapA5; Provisional | Back alignment and domain information |
|---|
| >COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics | Back alignment and domain information |
|---|
| >PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 | Back alignment and domain information |
|---|
| >TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT | Back alignment and domain information |
|---|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
| >PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins | Back alignment and domain information |
|---|
| >PRK13757 chloramphenicol acetyltransferase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 294 | ||||
| 2bgh_A | 421 | Crystal Structure Of Vinorine Synthase Length = 421 | 9e-30 | ||
| 4g0b_A | 436 | Structure Of Native Hct From Coffea Canephora Lengt | 7e-13 | ||
| 4g2m_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 2e-12 | ||
| 4g22_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 2e-11 |
| >pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase Length = 421 | Back alignment and structure |
|
| >pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436 | Back alignment and structure |
| >pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439 | Back alignment and structure |
| >pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 294 | |||
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 3e-48 | |
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 9e-46 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 6e-37 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 3e-36 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 1e-29 |
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 | Back alignment and structure |
|---|
Score = 165 bits (420), Expect = 3e-48
Identities = 62/337 (18%), Positives = 114/337 (33%), Gaps = 52/337 (15%)
Query: 4 LELMENSLSETLITFYPLAGRFIED---RTFVDCNDQGAEYLIAQLEAEL---------- 50
++++++LS L+ FYP+AGR D R ++CN +G ++ A+ + +
Sbjct: 58 AKVLKDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTL 117
Query: 51 -WNRFILFAKEVVAFSPT-VLAVQLNMFDCGGLAIGVPLSHKVADGFVIFTFFQAWAAAC 108
R I S +L +Q+ F CGG+++GV + H ADGF F +W+
Sbjct: 118 ELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMA 177
Query: 109 RFGNTTEVVTC-------------PSFEMGSLLLARDTDKLKIPVPEEYGVTMVTKRFVF 155
R G + P F+ + F
Sbjct: 178 R-GLDVTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKL 236
Query: 156 DELAISTLKAKAKAIGE---VSRVVVMTAVLWKARILVVQAKHGLLWPSLLNISYNLQRK 212
IS LKAK+K G S ++ +W+ + + L I+ + + +
Sbjct: 237 TREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQ--GTKLYIATDGRAR 294
Query: 213 --------------TGVIARFKTSE-CKLDFNDSAALLGNSIRETAADCLKTEDADDLFT 257
+ +A+ + +++ D L+ A D
Sbjct: 295 LRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLR--SALDYLE 352
Query: 258 LMISSMTEIHEILEKNETDICVFTSVCGFPYYEVDFG 294
L + + + TS P ++ DFG
Sbjct: 353 LQ-PDLKALVRGAHTFKCPNLGITSWVRLPIHDADFG 388
|
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 | Back alignment and structure |
|---|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 294 | |||
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 100.0 | |
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 100.0 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 100.0 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 100.0 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 100.0 | |
| 1q9j_A | 422 | PAPA5, polyketide synthase associated protein 5; c | 98.66 | |
| 2jgp_A | 520 | Tyrocidine synthetase 3; multifunctional enzyme, a | 98.39 | |
| 1l5a_A | 436 | Amide synthase, VIBH; nonribosomal peptide synthet | 98.2 | |
| 4hvm_A | 493 | Tlmii; PSI-biology, midwest center for structural | 98.17 | |
| 2xhg_A | 466 | Tyrocidine synthetase A; isomerase, nonribosomal p | 98.09 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 97.74 | |
| 3fot_A | 519 | 15-O-acetyltransferase; fusarium head blight, tric | 96.23 | |
| 3cla_A | 213 | Type III chloramphenicol acetyltransferase; transf | 80.65 |
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-59 Score=436.71 Aligned_cols=277 Identities=23% Similarity=0.352 Sum_probs=218.6
Q ss_pred hhHHHHHHHHHHhchhccCCCCcccc---CceEEEecCCCceEEEEEec--Hh---------hhhccccCcc-ccccCCC
Q 036076 2 ERLELMENSLSETLITFYPLAGRFIE---DRTFVDCNDQGAEYLIAQLE--AE---------LWNRFILFAK-EVVAFSP 66 (294)
Q Consensus 2 ~~~~~Lk~sLs~~L~~~~~laGr~~~---~~~~i~~~~~gv~f~~a~~d--~~---------~l~~l~P~~~-~~~~~~~ 66 (294)
+.+++||+||+++|++|||||||+.. |+++|+||++||.|+||++| ++ .+++|+|..+ ..+..+.
T Consensus 56 ~~~~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~~~~~~~ 135 (439)
T 4g22_A 56 FDAKVLKDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYSQGISSY 135 (439)
T ss_dssp TCHHHHHHHHHHHTTTTGGGGCEEEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTTSCTTSS
T ss_pred cHHHHHHHHHHHHHhhccccceeeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcccccccC
Confidence 35789999999999999999999443 58999999999999999984 22 2345555432 1223567
Q ss_pred ceEEEEEEEeecCeEEEecccccccchhhHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCcccCCCCCCCC--C----CC
Q 036076 67 TVLAVQLNMFDCGGLAIGVPLSHKVADGFVIFTFFQAWAAACRFGNTTEVVTCPSFEMGSLLLARDTDKLK--I----PV 140 (294)
Q Consensus 67 Pll~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r~g~~~~~~~~P~~dr~~l~~~~~~p~~~--~----~~ 140 (294)
|++.||||+|+|||++||+++||.++||.|+++|+++||++|| |.. ...+|++||+.+. ++++|... + +.
T Consensus 136 pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r-g~~--~~~~P~~dr~~l~-~~~pp~~~~~~~~~~~~ 211 (439)
T 4g22_A 136 ALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMAR-GLD--VTLPPFIDRTLLR-ARDPPQPQFQHIEYQPP 211 (439)
T ss_dssp CSEEEEEEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHHHHT-TCC--CSSCCBCCGGGGC-CCSSCCCSSCCGGGSCC
T ss_pred ceeEEEEEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHHHhC-CCC--CCCCCcccccccc-CCCCCCCCcCcccccCC
Confidence 9999999999999999999999999999999999999999999 974 3567999998553 23333211 1 11
Q ss_pred C-----C----CCC-cceEEEEEEEcHHHHHHHHHHHc-c--CCCCCeehhHHHHHHHHHHHHhccccCCCCceEEEEEe
Q 036076 141 P-----E----EYG-VTMVTKRFVFDELAISTLKAKAK-A--IGEVSRVVVMTAVLWKARILVVQAKHGLLWPSLLNISY 207 (294)
Q Consensus 141 ~-----~----~~~-~~~~~~~f~f~~~~i~~Lk~~~~-~--~~~~S~~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~v 207 (294)
+ . ..+ .++++++|+|++++|++||+++. + ..++|+||+|+||+|+|++|||...+ ++.+.+.++|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~--~~~~~l~~~v 289 (439)
T 4g22_A 212 PALAVSPQTAASDSVPETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIAT 289 (439)
T ss_dssp C---------------CEEEEEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCT--TCEEEEEEEE
T ss_pred CCCcccccccccCCcccceEEEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCC--CCcEEEEEEE
Confidence 0 0 111 56899999999999999999997 3 46799999999999999999997654 4789999999
Q ss_pred eCccccc------cceeecc--------cc-ccCcHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHHHHHHHhh---h
Q 036076 208 NLQRKTG------VIARFKT--------SE-CKLDFNDSAALLGNSIRETAADCLKTEDADDLFTLMISSMTEIHE---I 269 (294)
Q Consensus 208 d~R~rl~------~~~~~~~--------~~-~~~~l~~~A~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 269 (294)
|+|+|++ |+||+.. +| .+.+|+++|.+||++|.+++++|+++.++ |++... .
T Consensus 290 d~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~----------~~~~~~~~~~ 359 (439)
T 4g22_A 290 DGRARLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALD----------YLELQPDLKA 359 (439)
T ss_dssp ECTTTSSSCCCTTBCSCCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHH----------HHHTCSCSTT
T ss_pred cccCCCCCCCCCCcccceeehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHH----------HHHhCccchh
Confidence 9999997 9999742 33 56899999999999999999999998654 444321 1
Q ss_pred c----ccCCCCeEEEcccCCCCCCcCCCC
Q 036076 270 L----EKNETDICVFTSVCGFPYYEVDFG 294 (294)
Q Consensus 270 ~----~~~~~~~~~~ssw~~~~~y~~DFG 294 (294)
+ .......+.+|||+||++|++|||
T Consensus 360 ~~~~~~~~~~~~~~vssw~r~~~y~~DFG 388 (439)
T 4g22_A 360 LVRGAHTFKCPNLGITSWVRLPIHDADFG 388 (439)
T ss_dssp CCCCHHHHCTTCEEEEECTTSCTTCCCCS
T ss_pred hcccCCcCcCCcEEEeecCcCCccccccC
Confidence 1 001123599999999999999998
|
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} | Back alignment and structure |
|---|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* | Back alignment and structure |
|---|
| >1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
| >2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} | Back alignment and structure |
|---|
| >1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
| >4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} | Back alignment and structure |
|---|
| >2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} | Back alignment and structure |
|---|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A* | Back alignment and structure |
|---|
| >3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 294 | |||
| d1q9ja1 | 175 | Polyketide synthase associated protein 5, PapA5 {M | 97.4 | |
| d1l5aa1 | 174 | VibH {Vibrio cholerae [TaxId: 666]} | 97.4 | |
| d1q9ja2 | 238 | Polyketide synthase associated protein 5, PapA5 {M | 91.91 | |
| d1q23a_ | 214 | Chloramphenicol acetyltransferase, CAT {Escherichi | 83.6 | |
| d3claa_ | 213 | Chloramphenicol acetyltransferase, CAT {Escherichi | 83.05 |
| >d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: NRPS condensation domain (amide synthase) domain: Polyketide synthase associated protein 5, PapA5 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.40 E-value=0.00019 Score=55.70 Aligned_cols=102 Identities=17% Similarity=0.133 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhchhccCCCCcccc--CceEEEecCCC----ceEEEEEecHhhh-hccccCccccccCCCceEEEEEEEe
Q 036076 4 LELMENSLSETLITFYPLAGRFIE--DRTFVDCNDQG----AEYLIAQLEAELW-NRFILFAKEVVAFSPTVLAVQLNMF 76 (294)
Q Consensus 4 ~~~Lk~sLs~~L~~~~~laGr~~~--~~~~i~~~~~g----v~f~~a~~d~~~l-~~l~P~~~~~~~~~~Pll~vQvt~f 76 (294)
++.|++++..++..++.|-.++.. |.......++. +.......+.... ....+.. ...+.|+..+.+..-
T Consensus 36 ~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~---l~~~~~l~~~~i~~~ 112 (175)
T d1q9ja1 36 VDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVIDGTAATNGSPSGNAELR---LDQSVSLLHLQLILR 112 (175)
T ss_dssp HHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCCEEEC------------CCCC---CCTTTCSEEEEEECC
T ss_pred HHHHHHHHHHHHHhchhheEEEEEeCCeeEEEEECCCCCccEEEEEcccchhHHHHhhcccC---ccCCCCeEEEEEEec
Confidence 578999999999999999988543 22222221111 1111111111100 1111111 123456666655544
Q ss_pred ecCeEEEecccccccchhhHHHHHHHHHHHHHh
Q 036076 77 DCGGLAIGVPLSHKVADGFVIFTFFQAWAAACR 109 (294)
Q Consensus 77 ~cGG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r 109 (294)
. ++..+.+.+||.++||.|+..|++.+.+...
T Consensus 113 ~-~~~~l~l~~HH~i~Dg~S~~~ll~el~~~Y~ 144 (175)
T d1q9ja1 113 E-GGAELTLYLHHCMADGHHGAVLVDELFSRYT 144 (175)
T ss_dssp S-SSCEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred C-CeEEEEEEccccccCHhHHHHHHHHHHHHHH
Confidence 4 7888899999999999999999998876554
|
| >d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1q23a_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3claa_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|