Citrus Sinensis ID: 036104

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------76

MFWKLTALSASSPVESVLDKENFTLEELLDEEEIIQECKALNSRLINFLRDREQVEKLLRYIVEEAPADAESKQAFKFPFVACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSALLAGYFSKVVVCLMLRKTVPLMNYVQIHPDVFRRLVDLIGITSIMEVLVRLVGADDHAYPNFMDVMQWLADSNLLEMIVNKLSPLCPPEVHANAAETLCAITRNAPSALATKLASPSFVARIFGHALEDSRSKSSLVHSLSVCISLLDPKRSAIASPLMYSFRSQHMYESPNPVNPETIGAMLPKLCDLLMLLNVSSDEKFLETTYGELRPPLGKHRLKPTLPASGKRAPRAGNLGHITRISNKLVQLGSTNSRIHACLQENTEWSEWQVNVLQERNAVENVYRWACGRPTALQDRTKDSDDDDLHDRDYDVAALANNLSQAFRYKIYGNEDAEEDHGALDRDDEVLILVFTFIAINDKDVYFDDESAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRIGNAPVSTSPSEMMDEVNLNGTANGGNSSSDDEVVVGEDDELTESKDSVNGTSTSDANYLNTLPGSASLNTGDLNSQYLFAGRPLPDWEGWGGSSDMQVSGSSLNPFIDHDISDVNPASHNEAVTSDGSSPSSVESTLPNGSSTSMDSSDGTVSTDGSQRCASVPSLFEEDVEFVGVELEGTERAMEQALKEGIVGEAGPLKRNIITKGPEKENPDESGAAIKEFNDANYWRVDQEVAVLE

ccccccccccccHHHHHHccccccHHHHHccHHHHHHHHHHcHHHHHHHccHHHHHHHHHHHHHcccccHHHHHHcccccccHHcccccHHHHHHHHHcHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHcHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHcccc

cEEEEcccccccHHHHHHccccccHHHHccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHHHccccccccHHHHHHHHcHcHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHcccccccEEEHHHEEEEHHcccccccccccHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHccHHHEEEHcccccccccccccccccHccccccHHHHHHHHHHHHHHHccccccccHHHHcccccccccEEEEEEEEEEccccccEEcccccEEEEEEEEcccccccccccccccEEEccccccccccccccHHHHHHccccccccccccccccccEEcccHHHccccccccccccccccccccccccccccccccccccccccccccHHEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccEEEEEEcccccHHHHHHHHHcccccccccccccccccccccccccccccccEEEccccEEEEccEEEEEc

mfwkltalsasspvesvldkenftleeLLDEEEIIQECKALNSRLINFLRDREQVEKLLRYIVEeapadaeskqafkfpfvaceiFTCEIDVILKTLVEEEELMNLLFSflepnrphsalLAGYFSKVVVCLMLRktvplmnyvqihPDVFRRLVDLIGITSIMEVLVRLVgaddhaypnFMDVMQWLADSNLLEMIVNklsplcppevhANAAETLCAITRNAPSALATKLASPSFVARIFGHaledsrskssLVHSLSVCIslldpkrsaiasplMYSFRSqhmyespnpvnpetigaMLPKLCDLLMLLNVSSDEKFLEttygelrpplgkhrlkptlpasgkrapragnlghITRISNKLVQLGSTNSRIHACLQENTEWSEWQVNVLQERNAVENVYRwacgrptalqdrtkdsddddlhdrdYDVAALANNLSQAFRYkiygnedaeedhgaldrddeVLILVFTFIaindkdvyfddesAEVVISSLrlgddqgsslftnsnwfafqddrignapvstspsemmdevnlngtanggnsssddevvvgeddelteskdsvngtstsdanylntlpgsaslntgdlnsqylfagrplpdwegwggssdmqvsgsslnpfidhdisdvnpashneavtsdgsspssvestlpngsstsmdssdgtvstdgsqrcasvpslfeeDVEFVGVELEGTERAMEQALKEgivgeagplkrniitkgpekenpdesgaaikefndanywrvDQEVAVLE

mfwkltalsasspvesvldkeNFTLEELLDEEEIIQECKALNSRLINFLRDREQVEKLLRYIVEEapadaeskqaFKFPFVACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSALLAGYFSKVVVCLMLRKTVPLMNYVQIHPDVFRRLVDLIGITSIMEVLVRLVGADDHAYPNFMDVMQWLADSNLLEMIVNKLSPLCPPEVHANAAETLCAITRNAPSALATKLASPSFVARIFGHALEDSRSKSSLVHSLSVCISLLDPKRSAIASPLMYSFRSQHMYESPNPVNPETIGAMLPKLCDLLMLLNVSSDEKFLETTygelrpplgkhrlkptlpasgkrapragnlghiTRISNKLVQLGSTNSRIHACLQENTEWSEWQVNVLQERNAVENVYRWAcgrptalqdrtkdsdddDLHDRDYDVAALANNLSQAFRYKIYGNEDAEEDHGALDRDDEVLILVFTFIAindkdvyfdDESAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRIGNAPVSTSPSEMMDEVNLNgtanggnsssdDEVVVGEDDElteskdsvngtstsdanyLNTLPGSASLNTGDLNSQYLFAGRPLPDWEGWGGSSDMQVSGSSLNPFIDHDISDVNPASHNEavtsdgsspssvESTLPNGSSTSMDSSDGTVSTDGSQRCASVPSLFEEDVEFVGVELEGTERAMEQALkegivgeagplkrniitkgpekenpdesgaaikefndanywrVDQEVAVLE

MFWKLTALSASSPVESVLDKENFTleelldeeeIIQECKALNSRLINFLRDREQVEKLLRYIVEEAPADAESKQAFKFPFVACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSALLAGYFSKVVVCLMLRKTVPLMNYVQIHPDVFRRLVDLIGITSIMEVLVRLVGADDHAYPNFMDVMQWLADSNLLEMIVNKLSPLCPPEVHANAAETLCAITRNAPSALATKLASPSFVARIFGHALEDsrsksslvhslsvCISLLDPKRSAIASPLMYSFRSQHMYESPNPVNPETIGAMlpklcdllmllNVSSDEKFLETTYGELRPPLGKHRLKPTLPASGKRAPRAGNLGHITRISNKLVQLGSTNSRIHACLQENTEWSEWQVNVLQERNAVENVYRWACGRPTALQdrtkdsddddlhdrdydVAALANNLSQAFRYKIYGNEDAEEDHGALDRDDEVLILVFTFIAINDKDVYFDDESAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRIGNAPVSTSPSEMMDEVNLNGTANggnsssddevvvgeddeLTESKDSVNGTSTSDANYLNTLPGSASLNTGDLNSQYLFAGRPLPDWEGWGGSSDMQVSGSSLNPFIDHDISDVNPASHNEAVTSDGSSPSSVESTLPNgsstsmdssdgtvstdgsQRCASVPSLFEEDVEFVGVELEGTERAMEQALKEGIVGEAGPLKRNIITKGPEKENPDESGAAIKEFNDANYWRVDQEVAVLE

*******************KENFTLEELLDEEEIIQECKALNSRLINFLRDREQVEKLLRYIVEEAPADAESKQAFKFPFVACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSALLAGYFSKVVVCLMLRKTVPLMNYVQIHPDVFRRLVDLIGITSIMEVLVRLVGADDHAYPNFMDVMQWLADSNLLEMIVNKLSPLCPPEVHANAAETLCAITRNAPSALATKLASPSFVARIFGHALE******SLVHSLSVCISLLDPKRSAIASPLMYSFR*************ETIGAMLPKLCDLLMLLNVSSDEKFLETTYG***************************LGHITRISNKLVQLGSTNSRIHACLQENTEWSEWQVNVLQERNAVENVYRWACGRPT*****************DYDVAALANNLSQAFRYKIYGNEDA**DHGALDRDDEVLILVFTFIAINDKDVYFDDESAEVVISSLRLGDDQGSSLFTNSNWFAFQDD**************************************************************************LNSQYLFAGRPLPDWEGWG**************************************************************************LFEEDVEFVGVEL*********************************************FNDANYWRVD*******

MFWK***LSASSPVESVLDKENFTLEELLDEEEIIQECKALNSRLINFLRDREQVEKLLRYIVEEAPADAESKQAFKFPFVACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSALLAGYFSKVVVCLMLRKTVPLMNYVQIHPDVFRRLVDLIGITSIMEVLVRLVGADDHAYPNFMDVMQWLADSNLLEMIVNKLSPLCPPEVHANAAETLCAITRNAPSALATKLASPSFVARIFGHALEDSRSKSSLVHSLSVCISLLDPKRSAIASPLMYS****************TIGAMLPKLCDLLMLLNVSSDEKFLETTYGELRPPLGKHRLKPTLPASGKRAPRAGNLGHITRISNKLVQLGSTNSRIHACLQENTEWSEWQVNVLQERNAVEN*****************************************************************LILVFTFIAINDKDVYFDDESAE*******************************************************************************************************************************************************************************************************************************************************************WRVDQEVAVL*

MFWKLTALSASSPVESVLDKENFTLEELLDEEEIIQECKALNSRLINFLRDREQVEKLLRYIVEEAPADAESKQAFKFPFVACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSALLAGYFSKVVVCLMLRKTVPLMNYVQIHPDVFRRLVDLIGITSIMEVLVRLVGADDHAYPNFMDVMQWLADSNLLEMIVNKLSPLCPPEVHANAAETLCAITRNAPSALATKLASPSFVARIFGHALE**********SLSVCISLLDPKRSAIASPLMYSFRSQHMYESPNPVNPETIGAMLPKLCDLLMLLNVSSDEKFLETTYGELRPPLGKHRLKPTLPASGKRAPRAGNLGHITRISNKLVQLGSTNSRIHACLQENTEWSEWQVNVLQERNAVENVYRWACGRPTALQ*********DLHDRDYDVAALANNLSQAFRYKIYGNEDAEEDHGALDRDDEVLILVFTFIAINDKDVYFDDESAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRIGNAPVSTSPSEMMDEVNLNGTANGGNSSSDDEVVVGEDDELTESKDSVNGTSTSDANYLNTLPGSASLNTGDLNSQYLFAGRPLPDWEGWGGSSDMQVSGSSLNPFIDHDISDVNPASH*****************************************ASVPSLFEEDVEFVGVELEGTERAMEQALKEGIVGEAGPLKRNIITKGPEKENPDESGAAIKEFNDANYWRVDQEVAVLE

MFWKLTALSASSPVESVLDKENFTLEELLDEEEIIQECKALNSRLINFLRDREQVEKLLRYIVEEAPADAESKQAFKFPFVACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSALLAGYFSKVVVCLMLRKTVPLMNYVQIHPDVFRRLVDLIGITSIMEVLVRLVGADDHAYPNFMDVMQWLADSNLLEMIVNKLSPLCPPEVHANAAETLCAITRNAPSALATKLASPSFVARIFGHALEDSRSKSSLVHSLSVCISLLDPKRSAIASPLMYSFRSQHMYESPNPVNPETIGAMLPKLCDLLMLLNVSSDEKFLETTYGELRPPLGKHRLKPTLPASGKRAPRAGNLGHITRISNKLVQLGSTNSRIHACLQENTEWSEWQVNVLQERNAVENVYRWACGRPTALQDRTKDSDDDDLHDRDYDVAALANNLSQAFRYKIYGNED******ALDRDDEVLILVFTFIAINDKDVYFDDESAEVVISSLRLGDDQGSSLFTNSNWFAFQDD*******************************************************************************LFAGRPLPDWEGWGGSSD*QVSGSSL*************************************************************SLFEEDVEFVGVELEGTERAMEQALKEGIVGEAGPLK*****************AAIKEFNDANYWRVDQEVAVLE

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		758	2.2.26 [Sep-21-2011]
Q5F471		873	Serine/threonine-protein	yes	no	0.439	0.381	0.306	1e-45
Q5H9R7		873	Serine/threonine-protein	yes	no	0.439	0.381	0.303	2e-45
Q922D4		844	Serine/threonine-protein	yes	no	0.439	0.394	0.303	3e-45
O75170		966	Serine/threonine-protein	no	no	0.437	0.343	0.338	8e-45
Q8R3Q2		923	Serine/threonine-protein	no	no	0.437	0.359	0.332	1e-44
Q6NRF1		850	Serine/threonine-protein	N/A	no	0.437	0.390	0.3	2e-42
Q6NRI0		852	Serine/threonine-protein	N/A	no	0.437	0.389	0.3	5e-42
Q9UPN7		881	Serine/threonine-protein	no	no	0.435	0.374	0.308	9e-42
Q7TSI3		856	Serine/threonine-protein	no	no	0.440	0.390	0.306	1e-41
O74511		838	Extragenic suppressor of	yes	no	0.436	0.394	0.265	3e-26

>sp\|Q5F471\|PP6R3_CHICK Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Gallus gallus GN=PPP6R3 PE=2 SV=1	Back alignment and function desciption

 Score =  185 bits (470), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 193/349 (55%), Gaps = 16/349 (4%)

Query: 1   MFWKLTALSASSPVESVLDKENFTLEELLDEEEIIQECKALNSRLINFLRDREQVEKLLR 60
           MFWK   L +SS ++++L++E+ TL+EL+DEE+++QECKA N +LI FL   E +E L+ 
Sbjct: 1   MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKSECLEDLVS 59

Query: 61  YIVEEAPADAESKQAFKFPFVACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSAL 120
           +I+EE P D + K  +K+P ++CE+ T ++  I   L EEE L+  L+SFL    P + L
Sbjct: 60  FIIEEPPQDMDEKIRYKYPNISCELLTSDVSQINDRLGEEESLLMKLYSFLLNESPLNPL 119

Query: 121 LAGYFSKVVVCLMLRKTVPLMNYVQIHPDVFRRLVDLIGITSIMEVLVRLVGADDHAYPN 180
           LA +FSKV+  L+ RK   ++++++   D    ++  IG ++IM++L+RL+   +   P 
Sbjct: 120 LASFFSKVLSILISRKPEQIVDFLKKKHDFVDLVIKHIGTSAIMDLLLRLLTCIEPPQPR 179

Query: 181 FMDVMQWLADSNLLEMIVNKLSPLCPPEVHANAAETLCAITR------------NAPSAL 228
             +V+ WL +  +++ +V  + P    + H+NA+++LC I R            + P  L
Sbjct: 180 -QEVLNWLNEERIIQRLVEIVHPSQDEDRHSNASQSLCEIIRLSRDQMLQVQNSSEPDPL 238

Query: 229 ATKLASPSFVARIFGHALEDSRSKSSLVHSLSVCISLLDPKRSAIASPLMYSFRSQHMYE 288
              L     + ++  +     +++S++V ++ + ++LL+ +R      +        M  
Sbjct: 239 LASLEKREIIEQLLSNIFHKEKNESAIVSAIQILLTLLETRRQTFEGHI--EICPPGMSN 296

Query: 289 SPNPVNPETIGAMLPKLCDLLMLLNVSSDEKFLETTYGELRPPLGKHRL 337
           S   VN   + A+  +L     LL     +  ++TT+G L PP+G  RL
Sbjct: 297 STYSVNKSVLEAIKARLSSFHELLLEPPKKSVMKTTWGVLDPPVGNTRL 345

Regulatory subunit of protein phosphatase 6 (PP6). May function as a scaffolding PP6 subunit.
Gallus gallus (taxid: 9031)

>sp\|Q5H9R7\|PP6R3_HUMAN Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Homo sapiens GN=PPP6R3 PE=1 SV=2	Back alignment and function description

>sp\|Q922D4\|PP6R3_MOUSE Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Mus musculus GN=Ppp6r3 PE=1 SV=1	Back alignment and function description

>sp\|O75170\|PP6R2_HUMAN Serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Homo sapiens GN=PPP6R2 PE=1 SV=2	Back alignment and function description

>sp\|Q8R3Q2\|PP6R2_MOUSE Serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Mus musculus GN=Ppp6r2 PE=1 SV=1	Back alignment and function description

>sp\|Q6NRF1\|P6R3B_XENLA Serine/threonine-protein phosphatase 6 regulatory subunit 3-B OS=Xenopus laevis GN=ppp6r3-b PE=2 SV=1	Back alignment and function description

>sp\|Q6NRI0\|P6R3A_XENLA Serine/threonine-protein phosphatase 6 regulatory subunit 3-A OS=Xenopus laevis GN=ppp6r3-a PE=2 SV=1	Back alignment and function description

>sp\|Q9UPN7\|PP6R1_HUMAN Serine/threonine-protein phosphatase 6 regulatory subunit 1 OS=Homo sapiens GN=PPP6R1 PE=1 SV=5	Back alignment and function description

>sp\|Q7TSI3\|PP6R1_MOUSE Serine/threonine-protein phosphatase 6 regulatory subunit 1 OS=Mus musculus GN=Ppp6r1 PE=1 SV=1	Back alignment and function description

>sp\|O74511\|EKC1_SCHPO Extragenic suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ekc1 PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		758
4432841		826	hypothetical protein [Arabidopsis thalia	0.916	0.841	0.530	0.0
297822437		812	SIT4 phosphatase-associated family prote	0.914	0.853	0.527	0.0
255578147		845	conserved hypothetical protein [Ricinus	0.356	0.319	0.905	1e-173
224106732		830	predicted protein [Populus trichocarpa]	0.329	0.301	0.887	1e-167
225435331		850	PREDICTED: serine/threonine-protein phos	0.695	0.62	0.566	1e-164
297746264		790	unnamed protein product [Vitis vinifera]	0.444	0.426	0.872	1e-164
356543472		853	PREDICTED: serine/threonine-protein phos	0.503	0.447	0.75	1e-161
356550163		851	PREDICTED: serine/threonine-protein phos	0.505	0.450	0.743	1e-160
356550165		862	PREDICTED: serine/threonine-protein phos	0.505	0.444	0.743	1e-160
297843592		805	SIT4 phosphatase-associated family prote	0.369	0.347	0.825	1e-159

>gi\|4432841\|gb\|AAD20690.1\| hypothetical protein [Arabidopsis thaliana]	Back alignment and taxonomy information

 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/812 (53%), Positives = 526/812 (64%), Gaps = 117/812 (14%)

Query: 14  VESVLDKENFTLEELLDEEEIIQECKALNSRLINFLRDREQVEKLLRYIVEEAPADAESK 73
           VES+LDK++FTLEELLDEEEIIQECKALNSRLINFLR++ QVEKLLRY+VEE   DA+SK
Sbjct: 65  VESILDKDSFTLEELLDEEEIIQECKALNSRLINFLREKTQVEKLLRYVVEEPEDDADSK 124

Query: 74  QAFKFPFVACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSALLAGYFSKVVVCLM 133
           +AFKFPF++CEIFTCEIDVILKTLVE+E+LM+LLF FLEPNRPHSALLAGYF KVV+CLM
Sbjct: 125 RAFKFPFISCEIFTCEIDVILKTLVEDEKLMDLLFGFLEPNRPHSALLAGYFGKVVICLM 184

Query: 134 LRKTVPLMNYVQIHPDVFRRLVDLIGITSIMEVLVRLVGADDHAYPNFMDVMQWLADSNL 193
           +RKT  LM+Y++ H +VF +LVDLIGITSIMEVLVRLVGADDH YPNF DVM++LADS+L
Sbjct: 185 IRKTSALMSYIKGHGNVFSQLVDLIGITSIMEVLVRLVGADDHVYPNFPDVMRYLADSDL 244

Query: 194 LEMIVNKLSPLCPPEVHANAAETLCAITRNAPSALATKLASPSFVARIFGHALEDSRSKS 253
           LEMIV+KL+P  PPEV ANAAETLCAITRNAPSALATKL+SP FV+RIFGHA+EDS SKS
Sbjct: 245 LEMIVDKLNPSSPPEVQANAAETLCAITRNAPSALATKLSSPGFVSRIFGHAIEDSHSKS 304

Query: 254 SLVHSLSVCISLLDPKRSAIASPLMYSFRSQHMYESPNPVNPETIGAMLPKLCDLLMLLN 313
            LVHSL+VCISLLDP+RS  +SP   S+R Q+M+ESP PV  ETIGAMLPKL D+L+LL+
Sbjct: 305 GLVHSLTVCISLLDPRRSGASSPFFNSYRGQNMFESPVPVTQETIGAMLPKLGDMLVLLS 364

Query: 314 VSSDEKFLETTYGELRPPLGKHRLK-----PTLPASGKRAPRAGN----LGHITRISNKL 364
           V+SD K L TTYGELRPPLGKHRLK       L  SG  A  AG      G I RI    
Sbjct: 365 VTSDSKVLPTTYGELRPPLGKHRLKIVEFIAVLLKSGNEA--AGTELAISGTIKRILELF 422

Query: 365 VQLGSTNSRIH-------ACLQENTEWSEWQVN-VLQERNAVENVYR------------- 403
            +    N+  H       +CL+     SE  VN +LQ+ N +  +               
Sbjct: 423 FEYPYNNALHHQVESIILSCLENK---SEIMVNHILQDCNLISKILSSDKDSALSGDNLP 479

Query: 404 ------------WACGRPTALQD------------RTKDSDDDDLHDRDYDVAALANNLS 439
                          G  T L +            +T   ++ + ++    V    N + 
Sbjct: 480 TVVATGKKPPRVGYVGHITRLWNKLVQLSDSNALIKTSLQENSEWNEWQSSVLKERNTVE 539

Query: 440 QAFRY---KIYGNEDAEEDHGALDRDDEVLIL------VFTFIAI----NDKDVYFDDES 486
             +R+   +    +D   D    DRD +V  L       F +       N++D YFDDES
Sbjct: 540 NVYRWACGRPTTLQDRTRDSDEEDRDYDVAALANNLNQAFNYRIYGNEDNEEDSYFDDES 599

Query: 487 AEVVISSLRLGDDQGSSLFTNSNWFAFQDDRIGNAPVSTSPSEMMDEVNLNGTANGGNSS 546
           AEVVISSLRLGDDQG SL TNS+WF FQDDR  N P S +   M+++VN+N T N  +SS
Sbjct: 600 AEVVISSLRLGDDQG-SLLTNSDWFTFQDDRFSN-PTSDT---MIEDVNMNETTNANDSS 654

Query: 547 SDDEVVVGEDDELTESKDSVNGTSTSDANYLNTLPGSASLNTGDLNSQYLFAGRPLPDWE 606
           S D+ ++ E++E  +  +     S S+     +   S S+N    N+             
Sbjct: 655 SSDDELLVEEEEDDDLTEKSKNISPSNL----STSDSTSINISSENND------------ 698

Query: 607 GWGGSSDMQVSGSSLNPFIDHDISDVNPASHNEAVTSDGSSPSSVESTLPNGSSTSMDSS 666
                SDMQV+ SSLNPFID  + DV P    E V  + S  SS  S+L + S +S    
Sbjct: 699 ---EPSDMQVTSSSLNPFIDVPMLDVKP----EPVIPNSSPTSSESSSLGHKSPSS---- 747

Query: 667 DGTVSTDGSQRCASVPSLFEEDVEFVGVELEGTERAMEQALKEGIVGEAGPLKRNIITKG 726
                        +V +LFEEDVEFVGVE EGTE+AM+QALKEGIVGEAGPLKRNI+ K 
Sbjct: 748 ------------PAVRALFEEDVEFVGVEPEGTEKAMDQALKEGIVGEAGPLKRNIVQKV 795

Query: 727 PEKENPDESGAAIKEFNDANYWRVDQEVAVLE 758
           PE EN  E+ + + EFNDAN+WRVDQEV VLE
Sbjct: 796 PENENQAEN-SGVTEFNDANFWRVDQEVTVLE 826

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|297822437\|ref\|XP_002879101.1\| SIT4 phosphatase-associated family protein [Arabidopsis lyrata subsp. lyrata] gi\|297324940\|gb\|EFH55360.1\| SIT4 phosphatase-associated family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|255578147\|ref\|XP_002529943.1\| conserved hypothetical protein [Ricinus communis] gi\|223530573\|gb\|EEF32451.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

>gi\|224106732\|ref\|XP_002314265.1\| predicted protein [Populus trichocarpa] gi\|222850673\|gb\|EEE88220.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225435331\|ref\|XP_002285194.1\| PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 3-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297746264\|emb\|CBI16320.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356543472\|ref\|XP_003540184.1\| PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 3-like [Glycine max]	Back alignment and taxonomy information

>gi\|356550163\|ref\|XP_003543458.1\| PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 1-like isoform 1 [Glycine max]	Back alignment and taxonomy information

>gi\|356550165\|ref\|XP_003543459.1\| PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 1-like isoform 2 [Glycine max]	Back alignment and taxonomy information

>gi\|297843592\|ref\|XP_002889677.1\| SIT4 phosphatase-associated family protein [Arabidopsis lyrata subsp. lyrata] gi\|297335519\|gb\|EFH65936.1\| SIT4 phosphatase-associated family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		758
TAIR\|locus:2057507		788	AT2G28360 "AT2G28360" [Arabido	0.525	0.505	0.625	1.1e-217
TAIR\|locus:2205185		802	AT1G07990 "AT1G07990" [Arabido	0.445	0.421	0.736	2.7e-201
TAIR\|locus:2028185		811	AT1G30470 "AT1G30470" [Arabido	0.441	0.413	0.550	1.4e-152
UNIPROTKB\|O75170		966	PPP6R2 "Serine/threonine-prote	0.436	0.342	0.305	1.2e-34
MGI\|MGI:1918724		923	Ppp6r2 "protein phosphatase 6,	0.437	0.359	0.295	4.5e-34
UNIPROTKB\|Q5F471		873	PPP6R3 "Serine/threonine-prote	0.439	0.381	0.277	2.5e-33
UNIPROTKB\|G3X7E2		834	PPP6R2 "Uncharacterized protei	0.436	0.396	0.3	4.8e-33
UNIPROTKB\|F1RXT3		935	PPP6R2 "Uncharacterized protei	0.288	0.234	0.354	5.2e-33
MGI\|MGI:1921807		844	Ppp6r3 "protein phosphatase 6,	0.439	0.394	0.275	8.1e-33
UNIPROTKB\|E2R1Z7		873	PPP6R3 "Uncharacterized protei	0.439	0.381	0.275	9.1e-33

TAIR\|locus:2057507 AT2G28360 "AT2G28360" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1228 (437.3 bits), Expect = 1.1e-217, Sum P(4) = 1.1e-217
 Identities = 260/416 (62%), Positives = 303/416 (72%)

Query:     1 MFWKLTALSASSPVESVLDKENFTXXXXXXXXXIIQECKALNSRLINFLRDREQVEKLLR 60
             MFWKL +LSASSPVES+LDK++FT         IIQECKALNSRLINFLR++ QVEKLLR
Sbjct:     1 MFWKLASLSASSPVESILDKDSFTLEELLDEEEIIQECKALNSRLINFLREKTQVEKLLR 60

Query:    61 YIVEEAPADAESKQAFKFPFVACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSAL 120
             Y+VEE   DA+SK+AFKFPF++CEIFTCEIDVILKTLVE+E+LM+LLF FLEPNRPHSAL
Sbjct:    61 YVVEEPEDDADSKRAFKFPFISCEIFTCEIDVILKTLVEDEKLMDLLFGFLEPNRPHSAL 120

Query:   121 LAGYFSKVVVCLMLRKTVPLMNYVQIHPDVFRRLVDLIGITSIMEVLVRLVGADDHAYPN 180
             LAGYF KVV+CLM+RKT  LM+Y++ H +VF +LVDLIGITSIMEVLVRLVGADDH YPN
Sbjct:   121 LAGYFGKVVICLMIRKTSALMSYIKGHGNVFSQLVDLIGITSIMEVLVRLVGADDHVYPN 180

Query:   181 FMDVMQWLADSNLLEMIVNKLSPLCPPEVHANAAETLCAITRNAPSALATKLASPSFVAR 240
             F DVM++LADS+LLEMIV+KL+P  PPEV ANAAETLCAITRNAPSALATKL+SP FV+R
Sbjct:   181 FPDVMRYLADSDLLEMIVDKLNPSSPPEVQANAAETLCAITRNAPSALATKLSSPGFVSR 240

Query:   241 IFGHALEDXXXXXXXXXXXXXCISLLDPKRSAIASPLMYSFRSQHMYESPNPVNPETIGA 300
             IFGHA+ED             CISLLDP+RS  +SP   S+R Q+M+ESP PV  ETIGA
Sbjct:   241 IFGHAIEDSHSKSGLVHSLTVCISLLDPRRSGASSPFFNSYRGQNMFESPVPVTQETIGA 300

Query:   301 MXXXXXXXXXXXNVSSDEKFLETTYGELRPPLGKHRLK-----PTLPASGKRAP--RAGN 353
             M           +V+SD K L TTYGELRPPLGKHRLK       L  SG  A       
Sbjct:   301 MLPKLGDMLVLLSVTSDSKVLPTTYGELRPPLGKHRLKIVEFIAVLLKSGNEAAGTELAI 360

Query:   354 LGHITRISNKLVQLGSTNSRIH-------ACLQENTEWSEWQVN-VLQERNAVENV 401
              G I RI     +    N+  H       +CL EN   SE  VN +LQ+ N +  +
Sbjct:   361 SGTIKRILELFFEYPYNNALHHQVESIILSCL-ENK--SEIMVNHILQDCNLISKI 413

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR\|locus:2205185 AT1G07990 "AT1G07990" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2028185 AT1G30470 "AT1G30470" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|O75170 PPP6R2 "Serine/threonine-protein phosphatase 6 regulatory subunit 2" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

MGI\|MGI:1918724 Ppp6r2 "protein phosphatase 6, regulatory subunit 2" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5F471 PPP6R3 "Serine/threonine-protein phosphatase 6 regulatory subunit 3" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|G3X7E2 PPP6R2 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|F1RXT3 PPP6R2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

MGI\|MGI:1921807 Ppp6r3 "protein phosphatase 6, regulatory subunit 3" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|E2R1Z7 PPP6R3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		758
pfam04499		380	pfam04499, SAPS, SIT4 phosphatase-associated prote	4e-43
pfam04499		380	pfam04499, SAPS, SIT4 phosphatase-associated prote	3e-04

>gnl\|CDD\|218113 pfam04499, SAPS, SIT4 phosphatase-associated protein	Back alignment and domain information

 Score =  160 bits (406), Expect = 4e-43
 Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 24/225 (10%)

Query: 131 CLMLRKTVPLMNYVQIHPDVFRRLVDLIGITSIMEVLVRLVGADDHAYPNFMDVMQWLAD 190
            L+ RKT  ++ +++   +   + +  I   +IM++L++L+  +         +++WL +
Sbjct: 3   NLLDRKTDEMLEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTEK--PELPTGIIEWLNE 60

Query: 191 SNLLEMIVNKLSPLCPPEVHANAAETLCAI---TRNA---------PSALATKLASPSFV 238
             L+  +++ LSP    +V +NAA+ L AI   + N          P+ L  +L S   V
Sbjct: 61  QKLIPKLIDLLSPEYDSDVQSNAADFLKAIITISANQPLQLQSCIGPNELTRELVSEESV 120

Query: 239 ARIFGHALEDSRSKSSLVHSLSVCISLLDPKRSAIAS-PLMYSFRSQHMYESPNPVNPET 297
            ++  + L++  + S+LV+ + + I L+  +++      ++Y+    H    P+  +P  
Sbjct: 121 EKLLDNMLDEEGNGSALVNGVGILIELI--RKNNSDYDEILYTTIESHP---PSERDPIY 175

Query: 298 IGAML----PKLCDLLMLLNVSSDEKFLETTYGELRPPLGKHRLK 338
           +G++L    P L D   LL     +  L TTYG L  PLG  R K
Sbjct: 176 LGSLLRLFSPHLPDFHQLLLNPPKKPLLTTTYGVLIEPLGFERFK 220

This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes. Length = 380

>gnl\|CDD\|218113 pfam04499, SAPS, SIT4 phosphatase-associated protein	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		758
KOG2073		838	consensus SAP family cell cycle dependent phosphat	100.0
PF04499		475	SAPS: SIT4 phosphatase-associated protein; InterPr	100.0
KOG2073		838	consensus SAP family cell cycle dependent phosphat	96.85
PF04499		475	SAPS: SIT4 phosphatase-associated protein; InterPr	91.42

>KOG2073 consensus SAP family cell cycle dependent phosphatase-associated protein [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

Probab=100.00  E-value=4.5e-112  Score=980.38  Aligned_cols=707  Identities=35%  Similarity=0.526  Sum_probs=605.6

Q ss_pred             CCcCCCCCCCCChhhhhhcCCCCCHHHHhCChhHHHHHHhcchhHHHHhcCHHHHHHHHhhhccCCCCChHHhhhccccc
Q 036104            1 MFWKLTALSASSPVESVLDKENFTLEELLDEEEIIQECKALNSRLINFLRDREQVEKLLRYIVEEAPADAESKQAFKFPF   80 (758)
Q Consensus         1 MFWkf~g~~ssS~IDsLLdked~TLEeLLDEdDLLQE~KaqN~KLIdFL~kpevLekLI~YI~~eppEd~e~k~~~Kyp~   80 (758)
                      |||+|+ ....+.++.+|+++.+||++||||++++||||++|.||++||++|+++.+|+.||++++++++++|++||||+
T Consensus         1 ~f~~~~-~~~~~~~e~~l~~~~~~l~elldeed~~~e~~~~n~~l~~~l~~~e~~~~l~~~I~~e~~~d~D~k~~f~~p~   79 (838)
T KOG2073|consen    1 MFWDFD-LESSAEIELLLEKESDTLDELLDEEDILQECKLQNSKLLNFLKRPEVLEKLVEYIIEEPEEDADKKTRFKYPN   79 (838)
T ss_pred             Cccccc-cchhHHHHHhcccchhHHHHhhhhHHHHHHHHhhHHHHHHHHhhHHHHHHHHhhhhcCCCcccchhhhhcccc
Confidence            999998 7789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceehhcccchHHHHHHhhcCHHHHHHHHhhcCCCCCCChhhhhhHHHHHHHHHhcCchhHHHHHHhCccHHHHHHHhhCC
Q 036104           81 VACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRPHSALLAGYFSKVVVCLMLRKTVPLMNYVQIHPDVFRRLVDLIGI  160 (758)
Q Consensus        81 IAsEILSsdi~~I~d~Lvene~LL~kL~SFLd~~~plNplLAgYFsKIv~~LL~rkt~eml~FIk~~~~iVd~LLkHIdi  160 (758)
                      |+||||||++|.|.++|++|+.+|.+||+||+++.|+|+++++||+||+..|+.||+.+++.||++++++|+.|++||++
T Consensus        80 i~~Eilt~dv~~I~~~l~~de~ll~~l~s~l~~~~pln~~l~s~F~k~~~~Ll~~k~~~~~~f~k~~~~~v~~~l~hi~~  159 (838)
T KOG2073|consen   80 ISCEILTSDVWPISEALVEDESLLSLLYSILEHEPPLNPLLSSFFSKINSRLLDRKTEQILEFIKKKDNFVDLFLKHIDI  159 (838)
T ss_pred             HHHHHHhcCcHHHHHHHhccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHHcCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhccCCCCCCChhhHHHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHhc-----CChHHHHHhcCh
Q 036104          161 TSIMEVLVRLVGADDHAYPNFMDVMQWLADSNLLEMIVNKLSPLCPPEVHANAAETLCAITRN-----APSALATKLASP  235 (758)
Q Consensus       161 saImDLLLrLIs~De~~~p~~~~IieWL~eq~LI~rLI~lL~ps~s~dih~NAae~LkaIsrn-----~Pn~L~r~L~S~  235 (758)
                      ++|||||+|+++||++.+|. ++|++||+++++|+||+++|+|++++++|+||+++||+|+|.     |||+|+++|+||
T Consensus       160 stlMD~Llkli~~de~~~p~-~~Viq~l~d~~li~kll~ll~ps~~~~~qsna~~~L~~iv~~s~~~~gPn~L~~qL~s~  238 (838)
T KOG2073|consen  160 STLMDFLLKLISTDEPESPR-TDVIQWLNDQELIPKLLELLNPSKDPDVQSNAGQTLCAIVRLSRNQPGPNPLTKQLESP  238 (838)
T ss_pred             cHHHHHHHHhccccCCCCch-HHHHHHHhhHHHHHHHHHHhCCccccchhHHHHHHHHHHHhcccccCCCCHHHHhhcCH
Confidence            99999999999999999885 999999999999999999999999999999999999999988     999999999999


Q ss_pred             hHHHHHHHHHhcCCCCcccchhhhhhhhhccCCCccccccchhhhhcccCCCCCCCCCChhHHHHHHHHHHHHHHHhcCC
Q 036104          236 SFVARIFGHALEDSRSKSSLVHSLSVCISLLDPKRSAIASPLMYSFRSQHMYESPNPVNPETIGAMLPKLCDLLMLLNVS  315 (758)
Q Consensus       236 e~I~~Ll~~mL~~~~s~SsLVngIsILIeLLrknnsd~d~~~~~~~~~q~~~~~P~~~dPiyLg~mL~~f~df~~LL~~~  315 (758)
                      ++|+|||++||++++++|++|++|+|||+|+.++|.....+.++.+..|...+.+..+.+..|++|.|||++|++||+++
T Consensus       239 e~ieqLl~~ml~~~~s~s~lVs~i~vlI~ll~~~r~~~~~~~~~~i~~q~~~~~d~~~~~~~l~~~~p~L~dF~~lL~~~  318 (838)
T KOG2073|consen  239 ETIEQLLKIMLEDGTSLSVLVSGIIVLISLLNPRRDTVETNSTTTILSQPPSERDPIVLNELLGAMEPRLGDFVQLLLEP  318 (838)
T ss_pred             HHHHHHHHHHccCCcchhhHHHHHHHHHHhcCcccccccccceeeeecCCccccCccchHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999888766553233444443333333445556899999999999999999


Q ss_pred             CCCccccccccccCCCCcccccc------------------------------------------c-----------c--
Q 036104          316 SDEKFLETTYGELRPPLGKHRLK------------------------------------------P-----------T--  340 (758)
Q Consensus       316 ~~~~~L~TT~G~l~pPLG~~RLK------------------------------------------~-----------~--  340 (758)
                      +..+.|.||||+++||||++|||                                          |           .  
T Consensus       319 ~~~~~l~tt~g~l~pPLG~~Rlki~eliaelL~~~~~~l~~el~~~~~~~r~lD~f~~y~~nN~lh~~~e~~I~~~~~~~  398 (838)
T KOG2073|consen  319 EKLDLLETTYGELEPPLGFERLKIVELIAELLHCSNMTLLNELRAEGIAERLLDLFFEYPWNNFLHAQVESCIVENLSDE  398 (838)
T ss_pred             ccchhhhhhhhccCCCcchHHHHHHHHHHHHhccCcHHHHhHHhhhhhHHHHHHHHHhcchhHHHHHHHHHHHHHhhhcc
Confidence            99999999999999999999999                                          0           0  


Q ss_pred             -------c--------------------------------------cCCCCCCCCcchHhHHHHHH-HHHHHhc---CCc
Q 036104          341 -------L--------------------------------------PASGKRAPRAGNLGHITRIS-NKLVQLG---STN  371 (758)
Q Consensus       341 -------~--------------------------------------~a~~k~~~R~GyMGHLTrIA-N~Ivq~~---~~~  371 (758)
                             .                                      .+.++...|.|||||+||+| |+++|..   ++.
T Consensus       399 ~~~~~~~s~~~~~v~~~l~~c~l~~~~l~~~e~~e~~~~d~~~~~~~a~g~~~~~~g~~~h~~R~~pn~~vq~~~~~~~~  478 (838)
T KOG2073|consen  399 TNNDSNISADNEIVDHLLQDCQLSDNILNQWEDSEEDEGDEDDPSDGAFGGKEYRNGPIGHLTRIAPNVGDQLKIKLEDT  478 (838)
T ss_pred             ccccccCCCchHHHHHHHHHhhhhhhhhhcccccchhccccccchhhhhcCCcccCCccceeeecCcchhhhccccccch
Confidence                   0                                      01222224999999999999 9999984   488


Q ss_pred             HHHHHHHh--hccchhHHHHhhcc------cccccchhccccCC-CCCccCCCCCCCCcccccCCCccHHHHhhhhhhh-
Q 036104          372 SRIHACLQ--ENTEWSEWQVNVLQ------ERNAVENVYRWACG-RPTALQDRTKDSDDDDLHDRDYDVAALANNLSQA-  441 (758)
Q Consensus       372 ~~Iq~~Lq--en~~W~~Fv~~~L~------erN~VEnV~~w~cG-rpt~~~~~~~dsDddd~~d~d~~~~~~~~~l~qa-  441 (758)
                      ..|++.|+  .+..|++|...++.      .||+|+|+|.|.|| +|++.+++.+..|+++++||||++.+.++++.|+ 
T Consensus       479 ~~i~~~L~~f~~~~w~~we~~v~~di~~~~~nn~v~~~y~~~~~~~~~~~id~~~~~~e~~~~d~~~~~~~~~~~i~~~~  558 (838)
T KOG2073|consen  479 NIISTLLEGFPEEPWNNWEHNVLFDIEQQIFNNTVDNSYNDFLGYLTSNFIDLTRFNDEEEKADRDYDVMGHLDNIADHN  558 (838)
T ss_pred             HHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhcCccchhhhhhhhhccHHHHhhhccccchhhccccccchhhhhHhhhhh
Confidence            99999999  46799999999998      79999999999999 6999999999999999999999999999999998 


Q ss_pred             hcceeecCCChhhhccCCCcchhHHHHHHhhhccCCCcccccCcccceeeec---ccccCCcCC-Cccc-CCCccccccc
Q 036104          442 FRYKIYGNEDAEEDHGALDRDDEVLILVFTFIAINDKDVYFDDESAEVVISS---LRLGDDQGS-SLFT-NSNWFAFQDD  516 (758)
Q Consensus       442 f~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~-~~~~~~~~~~  516 (758)
                      |+|.++.+..+.+..+..+|  +              ..|||||+++||+++   +||||+|.+ ++++ |++||+|||+
T Consensus       559 F~~~~de~~~~~e~~~~~~~--~--------------~q~~~dE~~~~~l~~~~~~~lgd~~~~~~~~~~~~~~~~~~d~  622 (838)
T KOG2073|consen  559 FSINIDENSPNAEDLEVEDR--L--------------IQYFDDEKAETVLGAMGQLRLGDEDSEDSLKTWNGEELAGQDD  622 (838)
T ss_pred             ccccccccCchhhhhhhhcc--c--------------cccccccchheeecccccccccchhhhhhhhcccccccccccc
Confidence            99999999999999999988  7              789999999999999   999999988 7998 9999999999


Q ss_pred             ccCCCCCCCCCccccccccccCC-CCCCCCCCCCceEeccccccccccCCCCCCCCCcccccCCCCCCcccCCCCCCccc
Q 036104          517 RIGNAPVSTSPSEMMDEVNLNGT-ANGGNSSSDDEVVVGEDDELTESKDSVNGTSTSDANYLNTLPGSASLNTGDLNSQY  595 (758)
Q Consensus       517 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  595 (758)
                      +..+.++.+.....+.++..+.+ ++.+..++++..++|+-.+...+.++-..-..... -....++...+.    .+  
T Consensus       623 ~~~~~~~~~~~~~~~~D~e~~~t~n~~~~~~d~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~----p~--  695 (838)
T KOG2073|consen  623 KFDINDSEQDSYSGFFDVEEWETYNADEDNDDDTSSVIGEGGESPTGEPSWGEDSDENG-SADSTDGTDEFT----PD--  695 (838)
T ss_pred             ccCCCcccccccccccccccccCCCCccccccchhhhhhhcCCCCCCccccccCCCCCc-ccccCCCccccC----CC--
Confidence            98888876654445566666665 55556666678888885533332222221111110 001111111111    11  


Q ss_pred             ccCCCCCCCccccCCCCCCcCCCCCCCCcccCCCCCCCCCCCCccccCCCCCCCCccccCCCCCCCCcCCCCCCccCCCC
Q 036104          596 LFAGRPLPDWEGWGGSSDMQVSGSSLNPFIDHDISDVNPASHNEAVTSDGSSPSSVESTLPNGSSTSMDSSDGTVSTDGS  675 (758)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  675 (758)
                      ...++.-|.|+.|.+++....++++ .|                   +-++   ++.....|+++++..++.+.   ...
T Consensus       696 ~~~~~~~p~p~~~~~~~~~v~~~~~-~~-------------------~~d~---~s~~~~~n~~~~~~~~s~~~---~~~  749 (838)
T KOG2073|consen  696 HPETENSPSPSKPPGSAEGVSPKAS-EP-------------------NGDV---SSLGEQDNELTDSDEQSEGD---ETI  749 (838)
T ss_pred             CCcccCCCCCCCCccchhccCCccc-cc-------------------cccc---ccccccCCCCCccccccccc---cCC
Confidence            2333456799999888877666554 23                   2222   44555677777777666665   556


Q ss_pred             CCCCCCCccccccceEEeecc--hhhHHHHHHHHHhcccccCCCCccccccCCCCCCCCCCccccccccccCCceeeccc
Q 036104          676 QRCASVPSLFEEDVEFVGVEL--EGTERAMEQALKEGIVGEAGPLKRNIITKGPEKENPDESGAAIKEFNDANYWRVDQE  753 (758)
Q Consensus       676 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  753 (758)
                      |..+++++++++++||+||++  ++++++|.|+.|||+++++++++||.....+.+..++..+.-+..+||++||.+++|
T Consensus       750 p~~~a~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  829 (838)
T KOG2073|consen  750 PKRPAVPDLTGKDTENAVVRSTAPDSELSDDQDPKEGMWAEPSSAPRNSDETAPSSSGPDSPSSDFTSANDTSYWPVPHE  829 (838)
T ss_pred             CCCccccccccccccccccccCCCcccccccCCCcCCcccCccCCCCcccccCccccCCCCCCCccCcccccCCCCCccc
Confidence            666699999999999999999  999999999999999999999999998899999998888888999999999999999


Q ss_pred             ccccC
Q 036104          754 VAVLE  758 (758)
Q Consensus       754 ~~~~~  758 (758)
                      +++.|
T Consensus       830 ~~~~~  834 (838)
T KOG2073|consen  830 ITTEE  834 (838)
T ss_pred             ccccc
Confidence            98864

>PF04499 SAPS: SIT4 phosphatase-associated protein; InterPro: IPR007587 The SAPS family consists of proteins that associate with the SIT4 phosphatase protein []	Back alignment and domain information

>KOG2073 consensus SAP family cell cycle dependent phosphatase-associated protein [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF04499 SAPS: SIT4 phosphatase-associated protein; InterPro: IPR007587 The SAPS family consists of proteins that associate with the SIT4 phosphatase protein []	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		758
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 67.6 bits (164), Expect = 1e-11
 Identities = 66/460 (14%), Positives = 130/460 (28%), Gaps = 139/460 (30%)

Query: 1   MFWKLTALSASSPVESVLDKENFTLEELLDE---------EEIIQECKALNSRLINFLRD 51
           +FW L   + +SP E+VL+     L   +D            I     ++ + L   L+ 
Sbjct: 184 IFW-LNLKNCNSP-ETVLEMLQ-KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240

Query: 52  REQVEKLLRYIVEEAPADAESKQAFKFPFVACEI-----FTCEIDVILKTLVEEEELMNL 106
           +     LL  ++     +A++  AF     +C+I     F    D +         L + 
Sbjct: 241 KPYENCLL--VLLNV-QNAKAWNAFNL---SCKILLTTRFKQVTDFLSAATTTHISLDHH 294

Query: 107 LFSFLEPNRPHSALLAGYFSKVVVC--LMLRKTVPLMNYVQIHPDVFRRLVDLIGITSIM 164
             +           +     K + C    L + V     +  +P                
Sbjct: 295 SMTLTPDE------VKSLLLKYLDCRPQDLPREV-----LTTNP---------------- 327

Query: 165 EVLVRLVGADDHAYPNFMDVMQWL-----ADSNLLEMIVNKLSP-----------LCPPE 208
              + ++           D   W        + ++E  +N L P           + PP 
Sbjct: 328 -RRLSIIAESIRDGLATWD--NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS 384

Query: 209 VHANAAETLC----AITRNAPSALATKLASPSFVARIFGHALEDSRSKSSLVHSLSVCIS 264
            H      L      + ++    +  KL   S V +         +  +  + S+ + + 
Sbjct: 385 AHI-PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEK-------QPKESTISIPSIYLELK 436

Query: 265 LLDPKRSAIASPLMYSFRSQHMYESPNPVNPET-------IG------------AMLPKL 305
           +      A+   ++  +     ++S + + P         IG             +   +
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV 496

Query: 306 CDLLMLLNVSSDEKFLETTYGELRPPLGKHRLKPTLPASGKRAPRAGNLGHITRISNKLV 365
              L       D +FLE             +++    A                I N L 
Sbjct: 497 --FL-------DFRFLEQ------------KIRHDSTAWNASGS----------ILNTLQ 525

Query: 366 QLGSTNSRIHACLQENTEWSEWQVNVLQE--RNAVENVYR 403
           QL      I     +N    E  VN + +      EN+  
Sbjct: 526 QLKFYKPYI----CDNDPKYERLVNAILDFLPKIEENLIC 561

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		758
4hxt_A		252	De novo protein OR329; structural genomics, PSI-bi	88.95
4hxt_A		252	De novo protein OR329; structural genomics, PSI-bi	84.01
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	80.64

>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}	Back alignment and structure

Probab=88.95  E-value=4.5  Score=38.34  Aligned_cols=153  Identities=12%  Similarity=0.112  Sum_probs=91.1

Q ss_pred             HHHHHHHhhcCCCCCCChhhhhhHHHHHHHHHhcCchhHHHHHHhCccHHHHHHHhhCCh--HHHHHHHHHhccCCCCCC
Q 036104          102 ELMNLLFSFLEPNRPHSALLAGYFSKVVVCLMLRKTVPLMNYVQIHPDVFRRLVDLIGIT--SIMEVLVRLVGADDHAYP  179 (758)
Q Consensus       102 ~LL~kL~SFLd~~~plNplLAgYFsKIv~~LL~rkt~eml~FIk~~~~iVd~LLkHIdis--aImDLLLrLIs~De~~~p  179 (758)
                      ..+..|..+|..+   ++.+...-..++.+|....+. ....+.. .+.+..+++.+..+  .+..-.++.+..=-..  
T Consensus        86 ~~i~~l~~ll~~~---~~~v~~~a~~~L~~l~~~~~~-~~~~~~~-~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~--  158 (252)
T 4hxt_A           86 GGVEVLVKLLTST---DSEVQKEAARALANIASGPDE-AIKAIVD-AGGVEVLVKLLTSTDSEVQKEAARALANIASG--  158 (252)
T ss_dssp             THHHHHHHHTTCS---SHHHHHHHHHHHHHHTTSCHH-HHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS--
T ss_pred             CCHHHHHHHHcCC---CHHHHHHHHHHHHHHHcCCHH-HHHHHHH-CCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcC--
Confidence            4677788888754   355556667777777654433 3333333 46777777777543  3333333333311100  


Q ss_pred             ChhhHHHHhhhhhHHHHHHHhhCCCCCHHHHHhHHHHHHHHHhcCChHHHHHhcChhHHHHHHHHHhcCCCCcccchhhh
Q 036104          180 NFMDVMQWLADSNLLEMIVNKLSPLCPPEVHANAAETLCAITRNAPSALATKLASPSFVARIFGHALEDSRSKSSLVHSL  259 (758)
Q Consensus       180 ~~~~IieWL~eq~LI~rLI~lL~ps~s~dih~NAae~LkaIsrn~Pn~L~r~L~S~e~I~~Ll~~mL~~~~s~SsLVngI  259 (758)
                       ..+..+-+.+.+.++.|+.+|. +.++.++..|+..|..|++. .......+.....+..|+..+-.+.  ...-..++
T Consensus       159 -~~~~~~~~~~~~~i~~L~~ll~-~~~~~v~~~a~~~L~~l~~~-~~~~~~~l~~~~~i~~L~~ll~~~~--~~v~~~a~  233 (252)
T 4hxt_A          159 -PDEAIKAIVDAGGVEVLVKLLT-STDSEVQKEAARALANIASG-PTSAIKAIVDAGGVEVLQKLLTSTD--SEVQKEAQ  233 (252)
T ss_dssp             -CHHHHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTS-BHHHHHHHHHTTHHHHHHHGGGCSC--HHHHHHHH
T ss_pred             -CHHHHHHHHHCcCHHHHHHHHC-CCCHHHHHHHHHHHHHHHcC-CHHHHHHHHHCCCHHHHHHHHCCCc--HHHHHHHH
Confidence             1234456677899999999998 45689999999999999863 3344555656666776666543321  23334444


Q ss_pred             hhhhhcc
Q 036104          260 SVCISLL  266 (758)
Q Consensus       260 sILIeLL  266 (758)
                      .+|-.|.
T Consensus       234 ~~L~~l~  240 (252)
T 4hxt_A          234 RALENIK  240 (252)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4444443

PyMOL of 4hxt

>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00