Citrus Sinensis ID: 036124

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------43

MLWADSYHPLHLSSPGSLISAKYTHSLLMAIERRIDLLFSFSFFVLLMRPCCSQTDKLLRGQHLKDGDELVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGNTSASLLKTGNLVLYEMNSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSWISDFSPAQGSYTLGIDPNVPNQLIIWWRGDVYWTSEIWPKGWFHSYSLVSDGYNFGYTSSEHEKYFNYSANETITSFPVLRLTANGLSGALYADGIVKSPSCSKDFSYIEYKYGFMNGDGFKFKESDNMTLSDCKVKCFQNCSCVAYASINESNDTGCEIWSSGTKFTVTSITDRRIIFMAREAKGKSASKSKCLTRRKGIAKQKDLQQF

ccccccccccccccccccEEEEccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccEEEccccEEEEEEcccccccccEEEEEccccccccccccccccccccEEEcccccccccccccEEEEcccccEEEEcccccEEEEcccccccccEEEEEccccEEEEEcccccccccEEEEcccccccccccccEEccEEccccEEEEEEEcccccccccEEEEEEEcccccEEEEEEccEEEEEcccccccEEEEcccccccEEEEEEEcccEEEEEEEEccEEEEEEccccccccccccccccccccccccccccccccccccEEccccccccccccccHHHHHHHHHccccccccccccccccccEEEEcccccccEEcccccEEEEEEEcccccccccccccccccccccccccccc

ccccccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccEcccccEEEccccEEEEEEEcccccccEEEEEEEEEcccccEEEEEcccccEEEEEEccccccccccEEEEEEccccEEEEEEccccEEEEcccccccccHHEEcccccEEEEEcccccccccEEEEEcccccccccccccccccccccccHEEEccccccccccccEEEEEccccccEEEEEcccEEEEEccccccEEEccccccccEEEEEEcccEEEEEEEEEcccEEEEccccccccHcHcccccEEcccccccccccccccEEEccEccccccccccccccccHHHHHHHHHccccEEEEccccccccEEEEEcccHHHHHHHHcccccEEEEEEHHHHHHHccEEEEEEccEEEHHHHHcc

mlwadsyhplhlsspgslisakYTHSLLMAIERRIDLLFSFSFFVLlmrpccsqtdkllrgqhlkdgdELVSAFgyfrmgffspdgsenrylgvwyyrptdpsvfdyynsernkpvwvanrnnpildksgsltidstdgnlkilhnggnpiVITSvkadgntsasllKTGNLVLYEMNSDGSERRElwqsfdyptdtllpgmklginlqTGHQWFLQSwisdfspaqgsytlgidpnvpnqliiwwrgdvywtseiwpkgwfhsYSLVsdgynfgytssehekyfnysanetitsfPVLRLTANGlsgalyadgivkspscskdfsyIEYKygfmngdgfkfkesdnmtlsdckvkcfqncscvayasinesndtgceiwssgtkftvtsiTDRRIIFMAREakgksaskskclTRRKGIAKQKDLQQF

mlwadsyhplhlsspgslISAKYTHSLLMAIERRIDLLFSFSFFVLLMRPCCSQTDKLLRGQHLKDGDELVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGNTSASLLKTGNLVLYEMNSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSWISDFSPAQGSYTLGIDPNVPNQLIIWWRGDVYWTSEIWPKGWFHSYSLVSDGYNFGYTSSEHEKYFNYSANETITSFPVLRLTANGLSGALYADGIVKSPSCSKDFSYIEYKYGFMNGDGFKFKESDNMTLSDCKVKCFQNCSCVAYASINesndtgceiwssgtkftvtsitdRRIIFMareakgksaskskcltrrkgiakqkdlqqf

MLWADSYHPLHLSSPGSLISAKYTHSLLMAIERRIDllfsfsffvllMRPCCSQTDKLLRGQHLKDGDELVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGNTSASLLKTGNLVLYEMNSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSWISDFSPAQGSYTLGIDPNVPNQLIIWWRGDVYWTSEIWPKGWFHSYSLVSDGYNFGYTSSEHEKYFNYSANETITSFPVLRLTANGLSGALYADGIVKSPSCSKDFSYIEYKYGFMNGDGFKFKESDNMTLSDCKVKCFQNCSCVAYASINESNDTGCEIWSSGTKFTVTSITDRRIIFMAREAKGKSASKSKCLTRRKGIAKQKDLQQF

***************GSLISAKYTHSLLMAIERRIDLLFSFSFFVLLMRPCCSQTDKLLRGQHLKDGDELVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGNTSASLLKTGNLVLYEMNS****RRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSWISDFSPAQGSYTLGIDPNVPNQLIIWWRGDVYWTSEIWPKGWFHSYSLVSDGYNFGYTSSEHEKYFNYSANETITSFPVLRLTANGLSGALYADGIVKSPSCSKDFSYIEYKYGFMNGDGFKFKESDNMTLSDCKVKCFQNCSCVAYASINESNDTGCEIWSSGTKFTVTSITDRRIIFMA*****************************

*******HPL****PGSLISAKYTHSLLMAIERRIDLLFSFSFFVLLMRPCCSQTDKLLRGQHLKDGDELVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGNTSASLLKTGNLVLYEMNSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSWISDFSPAQGSYTLGIDPNVPNQLIIWWRGDVYWTSEIWPKGWFHSYSLVSDGYNFGYTSSEHEKYFNYSANETITSFPVLRLTANGLSGALYADGIVKSPSCSKDFSYIEYKYGFMNGDGFKFKESDNMTLSDCKVKCFQNCSCVAYASINESNDTGCEIWSSGTKFTVTSITDRRIIFMA**************************QQF

*LWADSYHPLHLSSPGSLISAKYTHSLLMAIERRIDLLFSFSFFVLLMRPCCSQTDKLLRGQHLKDGDELVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGNTSASLLKTGNLVLYEMNSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSWISDFSPAQGSYTLGIDPNVPNQLIIWWRGDVYWTSEIWPKGWFHSYSLVSDGYNFGYTSSEHEKYFNYSANETITSFPVLRLTANGLSGALYADGIVKSPSCSKDFSYIEYKYGFMNGDGFKFKESDNMTLSDCKVKCFQNCSCVAYASINESNDTGCEIWSSGTKFTVTSITDRRIIFMAREAKGKSASKSKCLTRRKGIAKQKDL*QF

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		429	2.2.26 [Sep-21-2011]
Q9LW83		850	G-type lectin S-receptor-	yes	no	0.764	0.385	0.418	2e-77
O64793		818	G-type lectin S-receptor-	no	no	0.741	0.388	0.418	1e-70
O81832		783	G-type lectin S-receptor-	no	no	0.755	0.413	0.300	4e-35
Q9SY89		842	Putative G-type lectin S-	no	no	0.547	0.279	0.352	3e-32
O81906		849	G-type lectin S-receptor-	no	no	0.585	0.295	0.350	4e-31
Q9ZT07		833	G-type lectin S-receptor-	no	no	0.727	0.374	0.297	1e-29
Q9ZR08		852	G-type lectin S-receptor-	no	no	0.461	0.232	0.380	4e-29
O81833		815	G-type lectin S-receptor-	no	no	0.699	0.368	0.312	5e-29
Q9SXB3		820	G-type lectin S-receptor-	no	no	0.468	0.245	0.371	4e-26
O64771		809	G-type lectin S-receptor-	no	no	0.461	0.244	0.359	1e-25

>sp\|Q9LW83\|CE101_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana GN=CES101 PE=2 SV=2	Back alignment and function desciption

 Score =  290 bits (741), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 167/399 (41%), Positives = 225/399 (56%), Gaps = 71/399 (17%)

Query: 41  FSFFVLLMRPCCSQTDKLLRGQHLKDGDELVSAFGYFRMGFFSPDGSENRYLGVWYYRPT 100
           F+F++ L + CC QTD LL+GQ+LKDG ELVSAF  F++ FF+ + S N YLG+WY    
Sbjct: 11  FTFYLFLGQSCC-QTDTLLQGQYLKDGQELVSAFNIFKLKFFNFENSSNWYLGIWYN--- 66

Query: 101 DPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADG 160
                ++Y S     VW+ANRNNP+L +SGSLT+DS  G L+IL    + + ++S +  G
Sbjct: 67  -----NFYLS---GAVWIANRNNPVLGRSGSLTVDSL-GRLRILRGASSLLELSSTETTG 117

Query: 161 NTSASLLKTGNLVLYEMNSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSWI 220
           NT+  LL +GNL L EM+SDGS +R LWQSFDYPTDTLLPGMKLG N++TG +W L SW+
Sbjct: 118 NTTLKLLDSGNLQLQEMDSDGSMKRTLWQSFDYPTDTLLPGMKLGFNVKTGKRWELTSWL 177

Query: 221 SDFSPAQGSYTLGIDPNVPNQLIIWWRGDVYWTSEIWPKGWFHSYSLVSDGYNFGYTSSE 280
            D  PA GS+  G+D N+ N+L I W G+VYW S +W KG F    L ++G+ F + S+E
Sbjct: 178 GDTLPASGSFVFGMDDNITNRLTILWLGNVYWASGLWFKGGFSLEKLNTNGFIFSFVSTE 237

Query: 281 HEKYFNYSANETITS--FPVLRLTANGLSGALYADGIVKSPSCS-----KDFSYIEYKYG 333
            E YF YS +E      FP +R+   G    +  DG+ K   CS     ++  Y  Y+  
Sbjct: 238 SEHYFMYSGDENYGGPLFPRIRIDQQGSLQKINLDGVKKHVHCSPSVFGEELEYGCYQQN 297

Query: 334 FMNGD-----------------------------------GFKFKES------------- 345
           F N                                     G+ F+E+             
Sbjct: 298 FRNCVPARYKEVTGSWDCSPFGFGYTYTRKTYDLSYCSRFGYTFRETVSPSAENGFVFNE 357

Query: 346 --DNMTLSDCKVKCFQNCSCVAYASINESNDTGCEIWSS 382
               ++  DC VKC QNCSCVAYAS N  + TGCEIW++
Sbjct: 358 IGRRLSSYDCYVKCLQNCSCVAYASTN-GDGTGCEIWNT 395

Promotes the expression of genes involved in photosynthesis at least in dedifferentiated calli.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp\|O64793\|Y1675_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 OS=Arabidopsis thaliana GN=At1g67520 PE=2 SV=3	Back alignment and function description

>sp\|O81832\|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4	Back alignment and function description

>sp\|Q9SY89\|Y1661_ARATH Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana GN=At1g61610 PE=2 SV=1	Back alignment and function description

>sp\|O81906\|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1	Back alignment and function description

>sp\|Q9ZT07\|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3	Back alignment and function description

>sp\|Q9ZR08\|Y4230_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana GN=At4g03230 PE=3 SV=3	Back alignment and function description

>sp\|O81833\|SD11_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana GN=SD11 PE=1 SV=1	Back alignment and function description

>sp\|Q9SXB3\|Y1112_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11280 OS=Arabidopsis thaliana GN=At1g11280 PE=2 SV=1	Back alignment and function description

>sp\|O64771\|Y1148_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61480 OS=Arabidopsis thaliana GN=At1g61480 PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		429
255550034		789	receptor protein kinase, putative [Ricin	0.836	0.455	0.487	8e-86
15233263		850	lectin receptor kinase CES101 [Arabidops	0.764	0.385	0.418	1e-75
9294449		805	receptor kinase 1 [Arabidopsis thaliana]	0.764	0.407	0.416	7e-74
255550026		795	Serine/threonine-protein kinase PBS1, pu	0.787	0.425	0.449	5e-73
297830182		767	CES101 [Arabidopsis lyrata subsp. lyrata	0.783	0.438	0.450	1e-72
397134747		852	S domain subfamily receptor-like kinase	0.766	0.386	0.417	3e-69
12324679		833	putative receptor protein kinase [Arabid	0.741	0.381	0.418	7e-69
322510097		818	RecName: Full=G-type lectin S-receptor-l	0.741	0.388	0.418	8e-69
42563025		587	lectin protein kinase-like protein [Arab	0.741	0.541	0.418	1e-68
359482600		789	PREDICTED: G-type lectin S-receptor-like	0.773	0.420	0.430	4e-67

>gi\|255550034\|ref\|XP_002516068.1\| receptor protein kinase, putative [Ricinus communis] gi\|223544973\|gb\|EEF46488.1\| receptor protein kinase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  323 bits (829), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 189/388 (48%), Positives = 241/388 (62%), Gaps = 29/388 (7%)

Query: 29  MAIERRIDLLFSFSFFVLLMRPCCSQTDKLLRGQHLKDGDELVSAFGYFRMGFFSPDGSE 88
           M  E    +L   S F+LL+    S TD LL+GQ LKDGD+LVSA G F + FF  D   
Sbjct: 1   MITEWTKPILVILSCFMLLLGSSWSVTDTLLQGQKLKDGDQLVSASGIFLLRFFRSD--- 57

Query: 89  NRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILH-NG 147
             YLG+WY    +    + +    +K VWVANRNNPI+DKSG LTI   DGNLKI + +G
Sbjct: 58  KHYLGIWYNMTDEQESINEFELS-SKVVWVANRNNPIVDKSGILTI-GRDGNLKISYGSG 115

Query: 148 GNPIVITSVKADGNTS---ASLLKTGNLVLYEMNSDGSERRELWQSFDYPTDTLLPGMKL 204
           G+ I +TSV+  GN +   A+LL +GNLVL E+ ++ S  R LWQSFDYPT  L PGMK+
Sbjct: 116 GDNISLTSVQKSGNNTNITATLLDSGNLVLRELYTNRSASRLLWQSFDYPTHALFPGMKI 175

Query: 205 GINLQTGHQWFLQSWISDFSPAQGSYTLGIDPNVPNQLIIWWRGDVYWTSEIWPKGWFHS 264
           GINLQTGH W L SWI+  SPA GS+T G+D N  NQLIIWW GDVYW S  W  G F  
Sbjct: 176 GINLQTGHSWSLTSWINTQSPAIGSFTFGMDRNGMNQLIIWWAGDVYWISGNWVDGGFKF 235

Query: 265 YSLVS--DGYNFGYTSSEHEKYFNYSANETITSFPVLRLTANGLSGA------------- 309
           + ++S  +GY+F Y S+E+E YF Y+A+E    FP+L +   GLS +             
Sbjct: 236 WHMLSAQEGYHFRYFSNENETYFTYNASENAKYFPMLWINDFGLSSSFARPLISCRSQYD 295

Query: 310 -LYADGIVKS-PSCSKDFSYIEYKYGFMNGDGFKFKESDNMTLSDCKVKCFQNCSCVAYA 367
            +   G V+S P C K  +  EY+   ++GD FKF ESD+++L DC  KC +NCSCVAY+
Sbjct: 296 YMNTIGCVQSRPICPKKATEFEYETAAVSGDSFKFNESDHLSLDDCLEKCLRNCSCVAYS 355

Query: 368 SINESNDTGCEIWSSGTKFTVTSITDRR 395
             NE + TGCEIWS   K T+ S  D R
Sbjct: 356 PTNEIDGTGCEIWS---KVTIESSADGR 380

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|15233263\|ref\|NP_188224.1\| lectin receptor kinase CES101 [Arabidopsis thaliana] gi\|313118276\|sp\|Q9LW83.2\|CE101_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase CES101; AltName: Full=Protein CALLUS EXPRESSION OF RBCS 101; Flags: Precursor gi\|332642243\|gb\|AEE75764.1\| lectin receptor kinase CES101 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|9294449\|dbj\|BAB02668.1\| receptor kinase 1 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|255550026\|ref\|XP_002516064.1\| Serine/threonine-protein kinase PBS1, putative [Ricinus communis] gi\|223544969\|gb\|EEF46484.1\| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|297830182\|ref\|XP_002882973.1\| CES101 [Arabidopsis lyrata subsp. lyrata] gi\|297328813\|gb\|EFH59232.1\| CES101 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|397134747\|gb\|AFO11038.1\| S domain subfamily receptor-like kinase [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|12324679\|gb\|AAG52302.1\|AC011020_9 putative receptor protein kinase [Arabidopsis thaliana] gi\|3176659\|gb\|AAC18783.1\| Strong similarity to receptor kinase gb\|M80238 from A. thaliana [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|322510097\|sp\|O64793.3\|Y1675_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520; Flags: Precursor	Back alignment and taxonomy information

>gi\|42563025\|ref\|NP_176919.2\| lectin protein kinase-like protein [Arabidopsis thaliana] gi\|332196537\|gb\|AEE34658.1\| lectin protein kinase-like protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|359482600\|ref\|XP_003632790.1\| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101-like [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		429
TAIR\|locus:2093397		850	CES101 "CALLUS EXPRESSION OF R	0.629	0.317	0.484	2e-79
TAIR\|locus:2146263		413	AT5G18470 [Arabidopsis thalian	0.533	0.554	0.419	1.3e-53
TAIR\|locus:2131684		783	AT4G27290 [Arabidopsis thalian	0.545	0.298	0.384	4.9e-40
TAIR\|locus:2200908		842	AT1G61610 [Arabidopsis thalian	0.526	0.268	0.361	8.6e-37
TAIR\|locus:2141176		849	B120 [Arabidopsis thaliana (ta	0.519	0.262	0.372	2.1e-36
TAIR\|locus:2131694		815	AT4G27300 [Arabidopsis thalian	0.517	0.272	0.360	5.1e-34
TAIR\|locus:2200151		830	SD1-13 "S-domain-1 13" [Arabid	0.456	0.236	0.367	2.4e-32
TAIR\|locus:2197709		809	AT1G61480 [Arabidopsis thalian	0.461	0.244	0.359	3.2e-29
TAIR\|locus:2197744		807	AT1G61420 [Arabidopsis thalian	0.440	0.234	0.360	5.1e-29
TAIR\|locus:2197664		804	AT1G61490 [Arabidopsis thalian	0.431	0.230	0.378	3e-27

TAIR\|locus:2093397 CES101 "CALLUS EXPRESSION OF RBCS 101" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 682 (245.1 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
 Identities = 138/285 (48%), Positives = 182/285 (63%)

Query:    51 CCSQTDKLLRGQHLKDGDELVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNS 110
             CC QTD LL+GQ+LKDG ELVSAF  F++ FF+ + S N YLG+WY         ++Y S
Sbjct:    21 CC-QTDTLLQGQYLKDGQELVSAFNIFKLKFFNFENSSNWYLGIWYN--------NFYLS 71

Query:   111 ERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGNTSASLLKTG 170
                  VW+ANRNNP+L +SGSLT+DS  G L+IL    + + ++S +  GNT+  LL +G
Sbjct:    72 GA---VWIANRNNPVLGRSGSLTVDSL-GRLRILRGASSLLELSSTETTGNTTLKLLDSG 127

Query:   171 NLVLYEMNSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSWISDFSPAQGSY 230
             NL L EM+SDGS +R LWQSFDYPTDTLLPGMKLG N++TG +W L SW+ D  PA GS+
Sbjct:   128 NLQLQEMDSDGSMKRTLWQSFDYPTDTLLPGMKLGFNVKTGKRWELTSWLGDTLPASGSF 187

Query:   231 TLGIDPNVPNQLIIWWRGDVYWTSEIWPKGWFHSYSLVSDGYNFGYTSSEHEKYFNYSAN 290
               G+D N+ N+L I W G+VYW S +W KG F    L ++G+ F + S+E E YF YS +
Sbjct:   188 VFGMDDNITNRLTILWLGNVYWASGLWFKGGFSLEKLNTNGFIFSFVSTESEHYFMYSGD 247

Query:   291 ETITS--FPVLRLTANGLSGALYADGIVKSPSCSKDFSYIEYKYG 333
             E      FP +R+   G    +  DG+ K   CS      E +YG
Sbjct:   248 ENYGGPLFPRIRIDQQGSLQKINLDGVKKHVHCSPSVFGEELEYG 292

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

TAIR\|locus:2146263 AT5G18470 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2197709 AT1G61480 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2197744 AT1G61420 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2197664 AT1G61490 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		429
pfam01453		109	pfam01453, B_lectin, D-mannose binding lectin	1e-28
cd00028		116	cd00028, B_lectin, Bulb-type mannose-specific lect	3e-25
smart00108		114	smart00108, B_lectin, Bulb-type mannose-specific l	2e-22
pfam08276		66	pfam08276, PAN_2, PAN-like domain	9e-10
cd01098		84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	4e-07
smart00473		78	smart00473, PAN_AP, divergent subfamily of APPLE d	2e-04

>gnl\|CDD\|216511 pfam01453, B_lectin, D-mannose binding lectin	Back alignment and domain information

 Score =  108 bits (271), Expect = 1e-28
 Identities = 50/114 (43%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 115 PVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPI--VITSVKADGNTSASLLKTGNL 172
            VWVANR NP+ D S +L +  +DGNL +    G  +    TS K      A L   GNL
Sbjct: 4   VVWVANRLNPLTDSSYTLIL-QSDGNLVLYDGNGRVVWSSNTSGKG-SGCVAVLQDDGNL 61

Query: 173 VLYEMNSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSWISDFSPA 226
           VLY      +  + LWQSFD+PTDTLLPG K G N+  G    L SW S+  P+
Sbjct: 62  VLY-----DNSGKVLWQSFDHPTDTLLPGQKDG-NVVIGGSRRLTSWKSNTDPS 109

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl\|CDD\|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin	Back alignment and domain information

>gnl\|CDD\|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin	Back alignment and domain information

>gnl\|CDD\|219774 pfam08276, PAN_2, PAN-like domain	Back alignment and domain information

>gnl\|CDD\|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins	Back alignment and domain information

>gnl\|CDD\|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		429
PF01453		114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.94
cd00028		116	B_lectin Bulb-type mannose-specific lectin. The do	99.92
smart00108		114	B_lectin Bulb-type mannose-specific lectin.	99.9
PF08276		66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.62
cd00129		80	PAN_APPLE PAN/APPLE-like domain; present in N-term	99.56
cd01098		84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.41
PF00954		110	S_locus_glycop: S-locus glycoprotein family; Inter	99.34
smart00473		78	PAN_AP divergent subfamily of APPLE domains. Apple	98.67
smart00108		114	B_lectin Bulb-type mannose-specific lectin.	98.47
cd00028		116	B_lectin Bulb-type mannose-specific lectin. The do	98.37
PF01453		114	B_lectin: D-mannose binding lectin; InterPro: IPR0	98.1
cd01100		73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	97.52
PF00024		79	PAN_1: PAN domain This Prosite entry concerns appl	92.24
smart00223		79	APPLE APPLE domain. Four-fold repeat in plasma kal	89.42
smart00605		94	CW CW domain.	87.32
PF08277		71	PAN_3: PAN-like domain; InterPro: IPR006583 PAN do	86.99
PF14295		51	PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A.	82.56

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Back alignment and domain information

Probab=99.94  E-value=1.8e-28  Score=211.88  Aligned_cols=109  Identities=43%  Similarity=0.687  Sum_probs=78.9

Q ss_pred             CCccEEEeCCCCCCCC--CCeEEEEEcCCCcEEEEeCCCCcEEEe-eecCC--CceEEEEeeCCCEEEEeccCCCcccce
Q 036124          112 RNKPVWVANRNNPILD--KSGSLTIDSTDGNLKILHNGGNPIVIT-SVKAD--GNTSASLLKTGNLVLYEMNSDGSERRE  186 (429)
Q Consensus       112 ~~tvVWvANr~~pv~~--~~~~L~l~~d~GnLvl~d~~g~~vWst-~~~~~--~~~~a~LlD~GNLVL~d~~~~~~~~~~  186 (429)
                      ++||||+|||+.|+..  ...+|.|+.| |||||+|..+.+||++ .+...  .+..|+|+|+|||||++.. +    .+
T Consensus         1 ~~tvvW~an~~~p~~~~s~~~~L~l~~d-GnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~-~----~~   74 (114)
T PF01453_consen    1 PRTVVWVANRNSPLTSSSGNYTLILQSD-GNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSS-G----NV   74 (114)
T ss_dssp             ---------TTEEEEECETTEEEEEETT-SEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETT-S----EE
T ss_pred             CcccccccccccccccccccccceECCC-CeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeec-c----eE
Confidence            3689999999999953  2478999999 9999999998899999 43322  4789999999999999963 2    79


Q ss_pred             eeeeccCCccccCCCCeeecccCCCceeEEEEeccCCCCC
Q 036124          187 LWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSWISDFSPA  226 (429)
Q Consensus       187 lWQSFd~PTDTLLPGq~L~~~~~tG~~~~LtSw~S~~dps  226 (429)
                      |||||||||||+||||+|+.+..+|.+..|+||++.+|||
T Consensus        75 lW~Sf~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   75 LWQSFDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             EEESTTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             EEeecCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            9999999999999999999877777666799999999996

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>cd00028 B_lectin Bulb-type mannose-specific lectin	Back alignment and domain information

>smart00108 B_lectin Bulb-type mannose-specific lectin	Back alignment and domain information

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []	Back alignment and domain information

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins	Back alignment and domain information

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins	Back alignment and domain information

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation	Back alignment and domain information

>smart00473 PAN_AP divergent subfamily of APPLE domains	Back alignment and domain information

>smart00108 B_lectin Bulb-type mannose-specific lectin	Back alignment and domain information

>cd00028 B_lectin Bulb-type mannose-specific lectin	Back alignment and domain information

Back alignment and domain information

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins	Back alignment and domain information

>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []	Back alignment and domain information

>smart00223 APPLE APPLE domain	Back alignment and domain information

>smart00605 CW CW domain	Back alignment and domain information

>PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []	Back alignment and domain information

>PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		429
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
1kj1_A		109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	4e-07
1xd5_A		112	Gastrodianin-1, antifungal protein GAFP-1; monocot	1e-06
2dpf_A		115	Curculin; sweet taste, taste modifying, plant prot	2e-05
3m7h_A		276	Putidacin L1; monocot mannose-binding lectin, bact	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 56.0 bits (134), Expect = 2e-08
 Identities = 59/426 (13%), Positives = 125/426 (29%), Gaps = 103/426 (24%)

Query: 14  SPGSLISAKYTHSLLMA--IERRIDLLFSFSFFVLLMRPCCSQTDKLLRGQHLKDGDELV 71
            P S++S +    ++M+         LF    + LL +       K +      +   L+
Sbjct: 41  MPKSILSKEEIDHIIMSKDAVSGTLRLF----WTLLSKQE-EMVQKFVEEVLRINYKFLM 95

Query: 72  SAFGYFRMGFFSPDGSENRYLGVWYYRP---TDPSVFDYYNSERNKPVWVAN------RN 122
           S     +     P      Y+     R     D  VF  YN  R +P           R 
Sbjct: 96  SPI---KTEQRQPSMMTRMYI---EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP 149

Query: 123 NP--ILD------KSGSLTIDSTDGNLKILHNGGNPIVITSVKADGNTSASLLKTGNLVL 174
               ++D      K+  + +D    + K+       I   ++K   N+  ++L+    +L
Sbjct: 150 AKNVLIDGVLGSGKT-WVALDVCL-SYKVQCKMDFKIFWLNLKNC-NSPETVLEMLQKLL 206

Query: 175 YEMNSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSWISDFSPAQGSYTLGI 234
           Y+++ + + R +   +      +                  +Q+ +           L  
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHS------------------IQAELRR---------LLK 239

Query: 235 DPNVPNQLIIWWRGDVYWTSEIWPKGWF----------------------HSYSLVSDGY 272
                N L++    +V   ++ W    F                       +  +  D +
Sbjct: 240 SKPYENCLLVL--LNV-QNAKAWNA--FNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294

Query: 273 NFGYTSSEHEKYFNYSANETITSFPVLRLTANGLSGALYADGIVKSPSCSKDFSYIEYKY 332
           +   T  E +       +      P   LT N    ++ A+ I    +   ++ ++    
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD- 353

Query: 333 GFMNGDGFKFKES-----DNMTLSDCKVKCFQNCSCVAYASINESNDTGCEIWSSGTKFT 387
                   K         + +  ++ + K F   S V   S +        IW    K  
Sbjct: 354 --------KLTTIIESSLNVLEPAEYR-KMFDRLS-VFPPSAHIPTILLSLIWFDVIKSD 403

Query: 388 VTSITD 393
           V  + +
Sbjct: 404 VMVVVN 409

PyMOL of 1vt4

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109	Back alignment and structure

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112	Back alignment and structure

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115	Back alignment and structure

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		429
3m7h_A		276	Putidacin L1; monocot mannose-binding lectin, bact	100.0
1dlp_A		236	Lectin scafet precursor; two-domain lectin, beta p	100.0
4h3o_A		105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.84
1b2p_A		119	Protein (lectin); mannose-binding lectin, monocot,	99.82
3a0c_A		110	Mannose/sialic acid-binding lectin; beta-prism II,	99.82
2dpf_A		115	Curculin; sweet taste, taste modifying, plant prot	99.79
1xd5_A		112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.78
3dzw_A		109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.74
3r0e_B		110	Lectin; carbohydrate binding, carbohydrate, sugar	99.67
3mez_B		113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.66
1xd5_A		112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.65
3a0c_A		110	Mannose/sialic acid-binding lectin; beta-prism II,	99.6
3r0e_A		109	Lectin; carbohydrate binding, carbohydrate, sugar	99.6
1b2p_A		119	Protein (lectin); mannose-binding lectin, monocot,	99.56
2dpf_A		115	Curculin; sweet taste, taste modifying, plant prot	99.54
3mez_A		111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.46
3mez_B		113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.32
3mez_A		111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.27
3m7h_A		276	Putidacin L1; monocot mannose-binding lectin, bact	99.22
3dzw_A		109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.13
3r0e_B		110	Lectin; carbohydrate binding, carbohydrate, sugar	99.1
3r0e_A		109	Lectin; carbohydrate binding, carbohydrate, sugar	99.06
4h3o_A		105	Lectin; cadmium, plant protein; 2.17A {Allium sati	98.87
1dlp_A		236	Lectin scafet precursor; two-domain lectin, beta p	98.44
2ll3_A		82	Micronemal protein 4; cell adhesion; NMR {Toxoplas	88.86

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*	Back alignment and structure

Probab=100.00  E-value=3.9e-42  Score=337.50  Aligned_cols=217  Identities=22%  Similarity=0.253  Sum_probs=169.1

Q ss_pred             ccccccccCCCCcccCCCeEEecCCeEEEeeeCCCCCCceEEEEEEecCCCCCcccccCCCCCccEEEeCCCCCCCCC--
Q 036124           51 CCSQTDKLLRGQHLKDGDELVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDK--  128 (429)
Q Consensus        51 ~~~~~~~l~~g~~L~~~~~L~S~~g~F~lGFf~~~~~~~~ylgIwy~~~~~~~~~~~~~~~~~tvVWvANr~~pv~~~--  128 (429)
                      ++++.|+|.+|++|++|++|+|++|.|+||||.++   ++||   |+  +           .+ |||+|||++|+.+.  
T Consensus        10 ~~~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~--~-----------~~-vvW~Anr~~p~~~~~~   69 (276)
T 3m7h_A           10 NGVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD--N-----------GA-TVWVANEQQPFSSTIP   69 (276)
T ss_dssp             CCTTSSEECTTEEBCTTCEEECTTSSEEEEECTTS---CEEE---EE--T-----------TE-EEEECSTTSTTEEEEE
T ss_pred             ccccCCEecCCCEecCCCEEEcCCCcEEEEEECCC---CeEE---EC--C-----------CC-eEEECCCCCCcCCccc
Confidence            45678999999999999999999999999999533   5776   76  5           77 99999999999864  


Q ss_pred             --CeEEEEEcCCCcEEE--EeCCCCcEEEe-eecC-----CCceEEEEeeCCCEEEEeccCCCcccceeeeeccCCcccc
Q 036124          129 --SGSLTIDSTDGNLKI--LHNGGNPIVIT-SVKA-----DGNTSASLLKTGNLVLYEMNSDGSERRELWQSFDYPTDTL  198 (429)
Q Consensus       129 --~~~L~l~~d~GnLvl--~d~~g~~vWst-~~~~-----~~~~~a~LlD~GNLVL~d~~~~~~~~~~lWQSFd~PTDTL  198 (429)
                        +++|+|+.| |+|||  .|++|.+||++ ++..     ..++.|+|+|+|||||++   +    .+||||  ||||||
T Consensus        70 ~~~~~l~l~~~-G~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~---~----~~lWqS--~ptdtl  139 (276)
T 3m7h_A           70 LRNKKAPLAFY-VQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD---S----LALWNG--TPAIPL  139 (276)
T ss_dssp             CCCTTCCSEEE-ESSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE---E----EEEEES--CTTSCC
T ss_pred             ccceEEEEeCC-CcEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC---C----ceeeCc--cccccc
Confidence              678999999 99999  78888999999 4321     235799999999999998   2    699999  999999


Q ss_pred             CCCCeeecccCCCceeEEEEeccCCCCCceeEEEeeCCCCCceEEEec-CCeeEEEeCCCCCceeeeeeeccCceeeEEE
Q 036124          199 LPGMKLGINLQTGHQWFLQSWISDFSPAQGSYTLGIDPNVPNQLIIWW-RGDVYWTSEIWPKGWFHSYSLVSDGYNFGYT  277 (429)
Q Consensus       199 LPGq~L~~~~~tG~~~~LtSw~S~~dps~G~fsl~l~~~g~~~l~~~~-~~~~Yw~sg~w~g~~fs~~p~~~~~~~~~f~  277 (429)
                      ||||+|+.++++|  +.|   ++..||++|.|+|+|+++|+  +++|+ +..+||++|+|++...... ...++ ++.+.
T Consensus       140 Lpg~~~~~~l~~g--~~L---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~yW~Sgt~~~~~~~l~-l~~dG-nLvl~  210 (276)
T 3m7h_A          140 VPGAIDSLLLAPG--SEL---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAATWNAGTQGKGAVRAV-FQGDG-NLVVY  210 (276)
T ss_dssp             CCSCTTCEEECSS--EEE---CTTCEEEETTEEEEECTTSC--EEEECTTSSEEEECCCTTTTCCEEE-ECTTS-CEEEE
T ss_pred             ccccccccccccC--ccc---ccCCCCCCceEEEeecCCce--EEEEeCCCeEEEECCCCCCccEEEE-EcCCC-eEEEE
Confidence            9999999998888  446   57899999999999999986  45565 4689999999976431111 01122 23333


Q ss_pred             ecCC-eeEEEEEecCCCceeeEEEEcccCcEEE
Q 036124          278 SSEH-EKYFNYSANETITSFPVLRLTANGLSGA  309 (429)
Q Consensus       278 ~~~~-e~~~~~~~~d~s~~~~rl~Ld~dG~lr~  309 (429)
                      ++++ .++.++  .... ..+|++|+.||+|++
T Consensus       211 d~~~~~vWsS~--t~~~-~~~rl~Ld~dGnLvl  240 (276)
T 3m7h_A          211 GAGNAVLWHSH--TGGH-ASAVLRLQANGSIAI  240 (276)
T ss_dssp             CTTSCEEEECS--CTTC-TTCEEEECTTSCEEE
T ss_pred             eCCCcEEEEec--CCCC-CCEEEEEcCCccEEE
Confidence            4333 333333  2222 347999999999997

PyMOL of 3m7h

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1	Back alignment and structure

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*	Back alignment and structure

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1	Back alignment and structure

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*	Back alignment and structure

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*	Back alignment and structure

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A	Back alignment and structure

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*	Back alignment and structure

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}	Back alignment and structure

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0	Back alignment and structure

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A	Back alignment and structure

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*	Back alignment and structure

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}	Back alignment and structure

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1	Back alignment and structure

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*	Back alignment and structure

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0	Back alignment and structure

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0	Back alignment and structure

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0	Back alignment and structure

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*	Back alignment and structure

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*	Back alignment and structure

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}	Back alignment and structure

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}	Back alignment and structure

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*	Back alignment and structure

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1	Back alignment and structure

>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		429
d1kj1a_		109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	2e-12
d1xd5a_		112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	1e-10
d1dlpa2		120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	2e-08
d1dlpa1		115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	1e-07
d1jpca_		108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	3e-06
d1b2pa_		119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	0.001

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109	Back information, alignment and structure


class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 61.1 bits (148), Expect = 2e-12
 Identities = 25/139 (17%), Positives = 44/139 (31%), Gaps = 33/139 (23%)

Query: 56  DKLLRGQHLKDGDELVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKP 115
           + L  G+ L  G  L      +              L ++                 +  
Sbjct: 2   NLLTNGEGLYAGQSLDV--EPYHFIMQED-----CNLVLYD---------------HSTS 39

Query: 116 VWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVIT-SVKADGNTSASLLKTGNLVL 174
           VW +N             + S DGN  +    G  +  + SV+ +GN    L + GN+V+
Sbjct: 40  VWASNTGILGKKGCK-AVLQS-DGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVI 97

Query: 175 YEMNSDGSERRELWQSFDY 193
           Y          ++W +  Y
Sbjct: 98  YG--------SDIWSTGTY 108

PyMOL of d1kj1a_

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112	Back information, alignment and structure

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120	Back information, alignment and structure

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115	Back information, alignment and structure

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108	Back information, alignment and structure

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		429
d1xd5a_		112	Gastrodianin (antifungal protein) {Gastrodia elata	99.84
d1kj1a_		109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.82
d1jpca_		108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.82
d1dlpa2		120	Fetuin-binding protein Scafet precursor {Bluebell	99.66
d1b2pa_		119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.57
d1dlpa1		115	Fetuin-binding protein Scafet precursor {Bluebell	99.54
d1dlpa1		115	Fetuin-binding protein Scafet precursor {Bluebell	99.38
d1dlpa2		120	Fetuin-binding protein Scafet precursor {Bluebell	99.14
d1b2pa_		119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.05
d1jpca_		108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	98.93
d1kj1a_		109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	98.89
d1xd5a_		112	Gastrodianin (antifungal protein) {Gastrodia elata	98.77
d2qj2a1		91	Hepatocyte growth factor {Human (Homo sapiens) [Ta	86.65

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}	Back information, alignment and structure

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.84  E-value=6.6e-21  Score=160.37  Aligned_cols=111  Identities=23%  Similarity=0.419  Sum_probs=91.4

Q ss_pred             ccccCCCCcccCCCeEEecCCeEEEeeeCCCCCCceEEEEEEecCCCCCcccccCCCCCccEEEeCCCCCCCCCCeEEEE
Q 036124           55 TDKLLRGQHLKDGDELVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTI  134 (429)
Q Consensus        55 ~~~l~~g~~L~~~~~L~S~~g~F~lGFf~~~~~~~~ylgIwy~~~~~~~~~~~~~~~~~tvVWvANr~~pv~~~~~~L~l  134 (429)
                      +|+|.+||.|.+|+.|++  |.|+|.|+.+++     |.|++               ..++||.||++.|..  .+.|.|
T Consensus         1 tDtL~~gq~L~~g~~l~~--g~~~l~~q~DGN-----Lvly~---------------~~~~vW~s~~~~~~~--~~~l~l   56 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LVLYD---------------NNRAVWASGTNGKAS--GCVLKM   56 (112)
T ss_dssp             CCEEETTEEECTTCEEEE--TTEEEEECTTSC-----EEEEE---------------TTEEEEECCCTTSCS--SEEEEE
T ss_pred             CCEecCCCEecCCCEEEE--CCEEEEEcCCCC-----EEEEc---------------CCcEEEEccCccCCC--CcEEEE
Confidence            489999999999999985  899999998775     33433               567899999998754  468999


Q ss_pred             EcCCCcEEEEeCCCCcEEEe-eecCCCceEEEEeeCCCEEEEeccCCCcccceeeeeccCCcc
Q 036124          135 DSTDGNLKILHNGGNPIVIT-SVKADGNTSASLLKTGNLVLYEMNSDGSERRELWQSFDYPTD  196 (429)
Q Consensus       135 ~~d~GnLvl~d~~g~~vWst-~~~~~~~~~a~LlD~GNLVL~d~~~~~~~~~~lWQSFd~PTD  196 (429)
                      +.| |+|||+|. +.++|++ +....+...|+|+|+|||||++.++     .++|||+.+|++
T Consensus        57 ~~d-GnLvl~~~-~~~~w~s~t~~~~~~~~l~L~ddGNlvly~~~~-----~~~W~S~t~~~n  112 (112)
T d1xd5a_          57 QND-GNLVIYSG-SRAIWASNTNRQNGNYYLILQRDRNVVIYDNSN-----NAIWATHTNVGN  112 (112)
T ss_dssp             CTT-SCEEEEET-TEEEEECCCCCSCCCCEEEECTTSCEEEECTTS-----CEEEECCCCCCC
T ss_pred             ecc-ccEEEEec-CCeEEEEeeccCCCceEEEEcCCCCEEEECCCC-----cEEecCCCccCC
Confidence            999 99999997 5678887 4444456789999999999998742     689999999975

PyMOL of d1xd5a_

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}	Back information, alignment and structure

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}	Back information, alignment and structure

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}	Back information, alignment and structure

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}	Back information, alignment and structure

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}	Back information, alignment and structure

>d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure