Citrus Sinensis ID: 036289

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
Protein Sequence
MGVAGTLEYLSDLMGSSGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKVEGTATNASVTTLEDPYISMFSDDNPNA
Secondary Structure (PSIPRED)
ccccHHHHHHHHccccccccccccccccEEEEEEEEEEHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEEccHHHHHHHHHHHcccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHccccccccccccEEEEEEEEEEEcccHHHHHHHHHHHHccccEEEEEcccccEEEEEEEccHHHHHHHHHHccccEEEccccccccccccccccccccccccccEEccccccccccccccccHHHcccccccccc
Coil and Loop (DISEMBL)
MGVAGTLEYLSdlmgssghkhkkkkkqLQTVDLKVrmdcdgcelKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKstgkraeiwpyvpynlvaqpyiagaydkrappgyvrkvegtatnasvttledpyismfsddnpna
Flexible Loop (DISEMBL)
MGVAGTLEYLSDlmgssghkhkkkkkqlqtvdLKVRMDCDGCELKVKNavsslsgvksveinrkqqkvsvtgyveankvlkkakstgkraeiwpyvpYNLVAQPYIAGAYDKRAPPGYVRKvegtatnasvttledpyismfsddnpna
Low Complexity Region (SEG)
MGVAGTLEYLSDLMgssghkhkkkkkQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKVEGTATNASVTTLEDPYISMFSDDNPNA
Disordered region (IsUnstruct)
********************************LKVRMDCDGCELKVKNAVSSLSGVKSVEINR*QQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKVEGTATNASVTT****************
Disordered Region (DISOPRED)
***AGTLEYL********************VDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYV*********************YVRKVEG*****SVTTLEDPYISMFSDDNPN*
Disordered Region (DISEMBL)
MGVAGTLEYLSDLMG**************TVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKVEGTATNASVTTLEDPYISMFSDDNPNA
Disordered Region (DISPRO)
*GVAGTLEYLSDLMGSSGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKVEGTA*************S*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGVAGTLEYLSDLMGSSGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKVEGTATNASVTTLEDPYISMFSDDNPNA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	149	2.2.26 [Sep-21-2011]
Q9SZN7	153	Heavy metal-associated is	no	no	0.966	0.941	0.510	3e-37

>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1

 Score =  153 bits (387), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 76/149 (51%), Positives = 107/149 (71%), Gaps = 5/149 (3%)

Query: 5   GTLEYLSDLMGSSGHKHK-KKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINR 63
           G L+++S++   S H HK KK+KQLQTV++KV+MDC+GCE KV+ +V  + GV SV +  
Sbjct: 2   GVLDHVSEMFDCS-HGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEP 60

Query: 64  KQQKVSVTGYVEANKVLKK-AKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKV 122
           K  KV+V GYV+ NKV+ + +  TGK+ E+WPYVPY++VA PY AG YDK+AP GYVR+V
Sbjct: 61  KAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRRV 120

Query: 123 E--GTATNASVTTLEDPYISMFSDDNPNA 149
           +  G +  A  ++ E  Y + FSD+NP A
Sbjct: 121 DDPGVSQLARASSTEVRYTTAFSDENPAA 149

Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	149
255576174	153	metal ion binding protein, putative [Ric	1.0	0.973	0.859	2e-66
449451469	151	PREDICTED: heavy metal-associated isopre	0.986	0.973	0.832	2e-63
225438631	151	PREDICTED: uncharacterized protein LOC10	0.986	0.973	0.791	1e-61
356525507	153	PREDICTED: uncharacterized protein LOC10	1.0	0.973	0.818	2e-61
351726052	152	uncharacterized protein LOC100500473 [Gl	0.993	0.973	0.812	6e-61
388504118	155	unknown [Lotus japonicus]	1.0	0.961	0.794	3e-59
224083753	153	predicted protein [Populus trichocarpa]	0.993	0.967	0.78	2e-58
357519565	153	hypothetical protein MTR_8g091420 [Medic	1.0	0.973	0.758	6e-56
388511387	153	unknown [Medicago truncatula]	1.0	0.973	0.751	1e-55
217075424	153	unknown [Medicago truncatula]	1.0	0.973	0.751	4e-55

>gi|255576174|ref|XP_002528981.1| metal ion binding protein, putative [Ricinus communis] gi|223531571|gb|EEF33400.1| metal ion binding protein, putative [Ricinus communis]

 Score =  256 bits (654), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 128/149 (85%), Positives = 139/149 (93%)

Query: 1   MGVAGTLEYLSDLMGSSGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVE 60
           MGV GTLEYLSDLMGSSGHK+KKKKKQLQTV+LK+RMDCDGCELKVKNA+SS+SGVK VE
Sbjct: 1   MGVGGTLEYLSDLMGSSGHKYKKKKKQLQTVELKIRMDCDGCELKVKNALSSMSGVKKVE 60

Query: 61  INRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVR 120
           INRKQQKV+VTGYV+ NKVLKKAKSTGK+AEIWPYVPYNLVAQPYIA AYDK+APPGYVR
Sbjct: 61  INRKQQKVTVTGYVDPNKVLKKAKSTGKKAEIWPYVPYNLVAQPYIAQAYDKKAPPGYVR 120

Query: 121 KVEGTATNASVTTLEDPYISMFSDDNPNA 149
            VE TAT+ +VT  EDPY SMFSDDNPNA
Sbjct: 121 NVENTATSGTVTRYEDPYSSMFSDDNPNA 149

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451469|ref|XP_004143484.1| PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cucumis sativus] gi|449504848|ref|XP_004162311.1| PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cucumis sativus]

 Score =  246 bits (628), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 124/149 (83%), Positives = 137/149 (91%), Gaps = 2/149 (1%)

Query: 1   MGVAGTLEYLSDLMGSSGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVE 60
           MGV GTLEYLSDL+G++     KKKKQLQTV+LKVRMDCDGCELKVKNA+SSLSGVKSVE
Sbjct: 1   MGVGGTLEYLSDLVGNT--HKHKKKKQLQTVELKVRMDCDGCELKVKNALSSLSGVKSVE 58

Query: 61  INRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVR 120
           INRKQQKV+VTGYVEA+K+LKKAKSTGK+AEIWPYVPY+LV+QPYIA AYDK+APPGYVR
Sbjct: 59  INRKQQKVTVTGYVEASKILKKAKSTGKKAEIWPYVPYSLVSQPYIAQAYDKKAPPGYVR 118

Query: 121 KVEGTATNASVTTLEDPYISMFSDDNPNA 149
            VE TAT ASVT  EDPYI+MFSDDNPNA
Sbjct: 119 NVEQTATTASVTKYEDPYINMFSDDNPNA 147

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438631|ref|XP_002281217.1| PREDICTED: uncharacterized protein LOC100245736 isoform 1 [Vitis vinifera]

 Score =  240 bits (613), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 118/149 (79%), Positives = 132/149 (88%), Gaps = 2/149 (1%)

Query: 1   MGVAGTLEYLSDLMGSSGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVE 60
           MGV GTLEYLSDLM SSGHKHKK+K Q QTV+LKVRMDC+GCELKVK  +SSLSGVKSV+
Sbjct: 1   MGVGGTLEYLSDLM-SSGHKHKKRK-QSQTVELKVRMDCEGCELKVKKTLSSLSGVKSVD 58

Query: 61  INRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVR 120
           INRKQQKV+VTGYV+ANKVLKKAKSTGK+AE+WPYVPYNLVAQPY   AYDK+APPGYVR
Sbjct: 59  INRKQQKVTVTGYVDANKVLKKAKSTGKKAELWPYVPYNLVAQPYAVHAYDKKAPPGYVR 118

Query: 121 KVEGTATNASVTTLEDPYISMFSDDNPNA 149
            VE    + +VT  EDPYI+MFSD+NPNA
Sbjct: 119 NVEQPPISGTVTRYEDPYITMFSDENPNA 147

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525507|ref|XP_003531366.1| PREDICTED: uncharacterized protein LOC100776974 isoform 1 [Glycine max] gi|356525509|ref|XP_003531367.1| PREDICTED: uncharacterized protein LOC100776974 isoform 2 [Glycine max]

 Score =  239 bits (611), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 122/149 (81%), Positives = 131/149 (87%)

Query: 1   MGVAGTLEYLSDLMGSSGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVE 60
           MGV GTLEYLSDLMGS  H HKKKKKQ QTV+LKVRMDCDGCELKVKNA+SSLSGVKSVE
Sbjct: 1   MGVGGTLEYLSDLMGSGHHHHKKKKKQFQTVELKVRMDCDGCELKVKNALSSLSGVKSVE 60

Query: 61  INRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVR 120
           INRKQQKV+VTGYVE NKVLKKAKSTGK+AEIWPYVPYNLVA PY   +YDK+APPGYVR
Sbjct: 61  INRKQQKVTVTGYVEPNKVLKKAKSTGKKAEIWPYVPYNLVAHPYAVPSYDKKAPPGYVR 120

Query: 121 KVEGTATNASVTTLEDPYISMFSDDNPNA 149
           +VE  A    +T  EDPYI+MFSDDNPNA
Sbjct: 121 RVEAPAHTGIITRYEDPYITMFSDDNPNA 149

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726052|ref|NP_001238649.1| uncharacterized protein LOC100500473 [Glycine max] gi|255630409|gb|ACU15561.1| unknown [Glycine max]

 Score =  238 bits (607), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 121/149 (81%), Positives = 131/149 (87%), Gaps = 1/149 (0%)

Query: 1   MGVAGTLEYLSDLMGSSGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVE 60
           MGV GTLEYLSDLMGS GH H KKKKQ QTV+LKVRMDCDGCELKVKNA+SSLSGVKSVE
Sbjct: 1   MGVGGTLEYLSDLMGS-GHHHHKKKKQFQTVELKVRMDCDGCELKVKNALSSLSGVKSVE 59

Query: 61  INRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVR 120
           INRKQQKV+VTGYVE NKVLKKAKSTGK+AEIWPYVPYNLV  PY   +YDK+APPGYVR
Sbjct: 60  INRKQQKVTVTGYVEPNKVLKKAKSTGKKAEIWPYVPYNLVVHPYAVPSYDKKAPPGYVR 119

Query: 121 KVEGTATNASVTTLEDPYISMFSDDNPNA 149
           +VE  A   ++T  EDPYI+MFSDDNPNA
Sbjct: 120 RVEAPAHTGTITRYEDPYITMFSDDNPNA 148

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504118|gb|AFK40125.1| unknown [Lotus japonicus]

 Score =  233 bits (593), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 120/151 (79%), Positives = 130/151 (86%), Gaps = 2/151 (1%)

Query: 1   MGVAGTLEYLSDLMGS--SGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKS 58
           MG++GTLEYLSDLMGS    H   KKKKQLQTV+LKVRMDCDGCELKVK  +SSLSGVKS
Sbjct: 1   MGISGTLEYLSDLMGSGYHHHHKMKKKKQLQTVELKVRMDCDGCELKVKKTLSSLSGVKS 60

Query: 59  VEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGY 118
           VEINRKQQKV+VTGYVE NKVLKKAKSTGKRAEIWPYVPYNLVA PY A AYDK+AP GY
Sbjct: 61  VEINRKQQKVTVTGYVEPNKVLKKAKSTGKRAEIWPYVPYNLVAHPYAAPAYDKKAPAGY 120

Query: 119 VRKVEGTATNASVTTLEDPYISMFSDDNPNA 149
           VR+VE TA   +VT  EDPY +MFSD+NPNA
Sbjct: 121 VRRVETTAATGTVTRYEDPYSNMFSDENPNA 151

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083753|ref|XP_002307111.1| predicted protein [Populus trichocarpa] gi|222856560|gb|EEE94107.1| predicted protein [Populus trichocarpa]

 Score =  229 bits (585), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 117/150 (78%), Positives = 130/150 (86%), Gaps = 2/150 (1%)

Query: 1   MGVAGTLEYLSDLMGSSGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVE 60
           MGV+GTLEYLSDL+GS      KKKKQLQTV+LKVRMDCDGCELKVK A+SSLSGVK VE
Sbjct: 1   MGVSGTLEYLSDLVGSG-GHKHKKKKQLQTVELKVRMDCDGCELKVKKAISSLSGVKKVE 59

Query: 61  INRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVR 120
           INRKQQ+V+VTGYV+++KVLKKAKSTGK+AEIWPYVPYNLVAQPY   AYDK+APPGYVR
Sbjct: 60  INRKQQRVTVTGYVDSSKVLKKAKSTGKKAEIWPYVPYNLVAQPYAVQAYDKKAPPGYVR 119

Query: 121 KVEGTATNASVTTL-EDPYISMFSDDNPNA 149
            VE T T  +VT   +DPY SMFSDDNPNA
Sbjct: 120 NVENTVTTGTVTRYDQDPYTSMFSDDNPNA 149

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357519565|ref|XP_003630071.1| hypothetical protein MTR_8g091420 [Medicago truncatula] gi|355524093|gb|AET04547.1| hypothetical protein MTR_8g091420 [Medicago truncatula]

 Score =  221 bits (564), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 113/149 (75%), Positives = 130/149 (87%)

Query: 1   MGVAGTLEYLSDLMGSSGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVE 60
           MGV GTLEYLSDL+ S  H  KKKKKQLQTV+LKVRMDCDGCELKVK  +SSLSGV+SV+
Sbjct: 1   MGVGGTLEYLSDLVSSGHHHLKKKKKQLQTVELKVRMDCDGCELKVKKTLSSLSGVQSVD 60

Query: 61  INRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVR 120
           INRKQQKV+VTG+V+ NKVLKKAKSTGK+AEIWPYVPYNLVAQPY   +YDK+APPGYVR
Sbjct: 61  INRKQQKVTVTGFVDPNKVLKKAKSTGKKAEIWPYVPYNLVAQPYAVSSYDKKAPPGYVR 120

Query: 121 KVEGTATNASVTTLEDPYISMFSDDNPNA 149
           +VE   T  ++T  EDPY++MFSD+NPNA
Sbjct: 121 RVENAPTTGTMTKYEDPYVNMFSDENPNA 149

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511387|gb|AFK43755.1| unknown [Medicago truncatula]

 Score =  221 bits (562), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 112/149 (75%), Positives = 130/149 (87%)

Query: 1   MGVAGTLEYLSDLMGSSGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVE 60
           MGV GTLEYLSDL+ S  H  KKKKKQLQTV+LKVRMDCDGCEL+VK  +SSLSGV+SV+
Sbjct: 1   MGVGGTLEYLSDLVSSGHHHLKKKKKQLQTVELKVRMDCDGCELRVKKTLSSLSGVQSVD 60

Query: 61  INRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVR 120
           INRKQQKV+VTG+V+ NKVLKKAKSTGK+AEIWPYVPYNLVAQPY   +YDK+APPGYVR
Sbjct: 61  INRKQQKVTVTGFVDPNKVLKKAKSTGKKAEIWPYVPYNLVAQPYAVSSYDKKAPPGYVR 120

Query: 121 KVEGTATNASVTTLEDPYISMFSDDNPNA 149
           +VE   T  ++T  EDPY++MFSD+NPNA
Sbjct: 121 RVENAPTTGTMTKYEDPYVNMFSDENPNA 149

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217075424|gb|ACJ86072.1| unknown [Medicago truncatula]

 Score =  219 bits (557), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 112/149 (75%), Positives = 129/149 (86%)

Query: 1   MGVAGTLEYLSDLMGSSGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVE 60
           MGV  TLEYLSDL+ S  H  KKKKKQLQTV+LKVRMDCDGCELKVK  +SSLSGV+SV+
Sbjct: 1   MGVGDTLEYLSDLVSSGHHHLKKKKKQLQTVELKVRMDCDGCELKVKKTLSSLSGVQSVD 60

Query: 61  INRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVR 120
           INRKQQKV+VTG+V+ NKVLKKAKSTGK+AEIWPYVPYNLVAQPY   +YDK+APPGYVR
Sbjct: 61  INRKQQKVTVTGFVDPNKVLKKAKSTGKKAEIWPYVPYNLVAQPYAVSSYDKKAPPGYVR 120

Query: 121 KVEGTATNASVTTLEDPYISMFSDDNPNA 149
           +VE   T  ++T  EDPY++MFSD+NPNA
Sbjct: 121 RVENAPTTGTMTKYEDPYVNMFSDENPNA 149

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	149
TAIR|locus:2135277	158	AT4G39700 [Arabidopsis thalian	1.0	0.943	0.655	1.2e-49
TAIR|locus:2026336	152	HIPP20 "heavy metal associated	0.986	0.967	0.573	1.2e-40
TAIR|locus:2133544	150	AT4G08570 "AT4G08570" [Arabido	0.973	0.966	0.546	1.8e-39
TAIR|locus:2017759	152	HIPP22 "heavy metal associated	0.959	0.940	0.550	4.8e-39
TAIR|locus:2157457	149	HIPP21 "heavy metal associated	0.959	0.959	0.482	9.2e-36
TAIR|locus:2121199	153	FP6 "farnesylated protein 6" [	0.973	0.947	0.466	2.5e-33
TAIR|locus:2156927	147	HIPP27 "heavy metal associated	0.825	0.836	0.496	2.3e-30
TAIR|locus:2131561	153	HIPP25 "heavy metal associated	0.966	0.941	0.429	8.2e-28
TAIR|locus:2202265	159	AT1G06330 "AT1G06330" [Arabido	0.483	0.452	0.575	2.3e-22
TAIR|locus:4515103273	166	AT3G56891 [Arabidopsis thalian	0.476	0.427	0.569	2.4e-19

TAIR|locus:2135277 AT4G39700 [Arabidopsis thaliana (taxid:3702)]

 Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
 Identities = 101/154 (65%), Positives = 122/154 (79%)

Query:     1 MGVAGTLEYLSDLMXXXXXXXXXXXX---QLQTVDLKVRMDCDGCELKVKNAVSSLSGVK 57
             MGV GTLEY+S+L+               Q QTV+LKVRMDCDGC LK+KN++SSL GVK
Sbjct:     1 MGVGGTLEYISELIGNGGSHSYGKRKKKKQFQTVELKVRMDCDGCVLKIKNSLSSLKGVK 60

Query:    58 SVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPG 117
             +VEIN+KQQKV+V+GY +A+KVLKKAK+TGK+AEIWPYVPYNLVAQPYIA AYDK+APPG
Sbjct:    61 TVEINKKQQKVTVSGYADASKVLKKAKATGKKAEIWPYVPYNLVAQPYIAQAYDKKAPPG 120

Query:   118 YVRKVEGTATNASVTTL-EDP-YISMFSDDNPNA 149
             YVRKV+   T  ++    +DP Y S+FSDDNPNA
Sbjct:   121 YVRKVDPNVTTGTMAVYYDDPSYTSLFSDDNPNA 154

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2026336 HIPP20 "heavy metal associated isoprenylated plant protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 86/150 (57%), Positives = 106/150 (70%)

Query:     1 MGVAGTL-EYLSDLMXXXXXXXXXXXXQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSV 59
             MG   +L EY+SD               +QTV++KV+MDCDGCE +VKNAVSS+ GVKSV
Sbjct:     1 MGALDSLSEYISDYFRVTRKRRKRKV--MQTVNIKVKMDCDGCERRVKNAVSSMKGVKSV 58

Query:    60 EINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYV 119
             E+NRK  KV+V+GYVE  KVLK+ + TGK+AEIWPYVPYN+VA PY  G YDK+AP GYV
Sbjct:    59 EVNRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWPYVPYNMVAYPYAVGTYDKKAPAGYV 118

Query:   120 RKVEGTATNASVTTLEDPYISMFSDDNPNA 149
             RK E +         E+ YIS+FSD+NPNA
Sbjct:   119 RKSEQSQLQLLPGAPENHYISLFSDENPNA 148

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2133544 AT4G08570 "AT4G08570" [Arabidopsis thaliana (taxid:3702)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 82/150 (54%), Positives = 111/150 (74%)

Query:     1 MGVAGTLEYLSDLMXXXXXXXXXXXXQLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSV 59
             MGV GT+EY+SDL+            Q+QTV L+V R+DC+GCE K+K+ +S + GVKSV
Sbjct:     1 MGVEGTMEYISDLLKKRKRKKKK---QMQTVALRVARIDCEGCERKIKHVLSGVKGVKSV 57

Query:    60 EINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYV 119
             +++ K QKV+VTGY++  KVL+ AKST K+ E+WPYVPY +VA PYI+ AYDK+APP  V
Sbjct:    58 DVDVKLQKVTVTGYIDPKKVLEAAKSTKKKVELWPYVPYTMVANPYISQAYDKKAPPNMV 117

Query:   120 RKVEGTATNASVTTLEDPYISMFSDDNPNA 149
             RKV  TA+  + TT++D Y  MFSD+NPN+
Sbjct:   118 RKVPDTAS-VNETTVDDSYTIMFSDENPNS 146

GO:0005575 "cellular_component" evidence=ND

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2017759 HIPP22 "heavy metal associated isoprenylated plant protein 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 82/149 (55%), Positives = 104/149 (69%)

Query:     5 GTLEYLSDLMXXXXXXXXXXXXQ---LQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEI 61
             G L YLS+              +   +QTV++KV++DCDGCE K+KNAVSS+ G KSVE+
Sbjct:     2 GALNYLSEYFSNHFYVSIRKRKKRKVMQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVEV 61

Query:    62 NRKQQKVSVTGYVEANKVLKKAKSTGKR-AEIWPYVPYNLVAQPYIAGAYDKRAPPGYVR 120
             NRK  KV+V+GYV+  KVLK  +STGK+ AE+WPYVPY +VA PY AGAYDKRAPPG+VR
Sbjct:    62 NRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKRAPPGFVR 121

Query:   121 KVEGTATNASVTTLEDPYISMFSDDNPNA 149
             K E        T  +D  +S+FSD+NPNA
Sbjct:   122 KSEQAQAQPGST--DDKLMSLFSDENPNA 148

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2157457 HIPP21 "heavy metal associated isoprenylated plant protein 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 70/145 (48%), Positives = 97/145 (66%)

Query:     5 GTLEYLSDLMXXXXXXXXXXXXQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRK 64
             G  +Y+S                LQTVD+KV+MDCDGCE +V+N V  + GVKSVE+NRK
Sbjct:     2 GAFDYISSFCSYTYANAKTKRKPLQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNRK 61

Query:    65 QQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKVEG 124
             Q +++V G+V+ NKVLK+ KSTGK+AE WPY+P ++V  P+  G YDKRAP G++R    
Sbjct:    62 QSRITVNGHVDPNKVLKRVKSTGKKAEFWPYIPQHMVYYPFAPGMYDKRAPAGHIRNPTQ 121

Query:   125 TATNASVTTLEDPYISMFSDDNPNA 149
             +   A+    E+ Y+S+FSDDN +A
Sbjct:   122 SFPTANAP--EENYVSLFSDDNVHA 144

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;IGI

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2121199 FP6 "farnesylated protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 69/148 (46%), Positives = 99/148 (66%)

Query:     5 GTLEYLSDLMXXXXXXXXXXXXQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRK 64
             G L+++S++             QLQTV++KV+MDC+GCE KV+ +V  + GV SV +  K
Sbjct:     2 GVLDHVSEMFDCSHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPK 61

Query:    65 QQKVSVTGYVEANKVLKK-AKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKVE 123
               KV+V GYV+ NKV+ + +  TGK+ E+WPYVPY++VA PY AG YDK+AP GYVR+V+
Sbjct:    62 AHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRRVD 121

Query:   124 --GTATNASVTTLEDPYISMFSDDNPNA 149
               G +  A  ++ E  Y + FSD+NP A
Sbjct:   122 DPGVSQLARASSTEVRYTTAFSDENPAA 149

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0010286 "heat acclimation" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2156927 HIPP27 "heavy metal associated isoprenylated plant protein 27" [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 63/127 (49%), Positives = 86/127 (67%)

Query:    27 QLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKS- 85
             Q Q V++KV+MDC+GCE +V+ +V  + GV  V ++ KQ K++V G+V+ +KV+ +    
Sbjct:    17 QFQKVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHRVMHR 76

Query:    86 TGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKVEG---TATNASVTTLEDPYISMF 142
             TGK+AE+WPYVPY +V  PY  GAYDK+APPGYVR        A  A  ++ E  Y S F
Sbjct:    77 TGKKAELWPYVPYEVVPHPYAPGAYDKKAPPGYVRNALADPLVAPLARASSFEVKYTSAF 136

Query:   143 SDDNPNA 149
             SDDNPNA
Sbjct:   137 SDDNPNA 143

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2131561 HIPP25 "heavy metal associated isoprenylated plant protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 64/149 (42%), Positives = 92/149 (61%)

Query:     5 GTLEYLSDLMXXXXXXXXXXXXQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRK 64
             G L+++S+               LQTVD++V +DC+GCE KV+ A+  + G++ V I   
Sbjct:     2 GVLDHVSEYFDCSHGSSKRHKS-LQTVDVRVLIDCEGCERKVRRALEGMRGIRDVTIEPN 60

Query:    65 QQKVSVTGYVEANKVLKKA-KSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKVE 123
              QKV+V GYVE NKV+ +    TGKRAE++P+VPY++VA PY +G YD RAP GYVR  E
Sbjct:    61 AQKVTVVGYVEPNKVVARIIHRTGKRAELYPFVPYDVVAHPYASGVYDNRAPTGYVRNTE 120

Query:   124 ---GTATNASVTTLEDPYISMFSDDNPNA 149
                  +  A  ++ E  Y + FSD+N +A
Sbjct:   121 YDPHVSRLARASSTEVRYTTAFSDENASA 149

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2202265 AT1G06330 "AT1G06330" [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
 Identities = 42/73 (57%), Positives = 57/73 (78%)

Query:    27 QLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKST 86
             QLQT++++V MDC GCE +VKNA+  + GV +VEI+  QQKV+VTGY +  KVLKK + T
Sbjct:     9 QLQTIEMRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRKT 68

Query:    87 GKRAEIWPYVPYN 99
             G+RAE+W  +PYN
Sbjct:    69 GRRAELWQ-LPYN 80

GO:0005507 "copper ion binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:4515103273 AT3G56891 [Arabidopsis thaliana (taxid:3702)]

 Score = 208 (78.3 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
 Identities = 41/72 (56%), Positives = 52/72 (72%)

Query:    28 LQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTG 87
             L  V+L V MDC GCE KV+ A+S L GV +VEI+  +QKV+VTGYV+  +VLK  K TG
Sbjct:    15 LSIVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTG 74

Query:    88 KRAEIWPYVPYN 99
             + AE WP+ PYN
Sbjct:    75 RTAEYWPF-PYN 85

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019438001 SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (151 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	149
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	2e-12
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	5e-10
PLN02957	238	PLN02957, PLN02957, copper, zinc superoxide dismut	6e-07
COG2608	71	COG2608, CopZ, Copper chaperone [Inorganic ion tra	2e-05
PRK10671	834	PRK10671, copA, copper exporting ATPase; Provision	6e-04
PRK11033	741	PRK11033, zntA, zinc/cadmium/mercury/lead-transpor	0.004

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 58.0 bits (141), Expect = 2e-12
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 37 MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEAN--KVLKKAKSTGKRAE 91
          M C GC  K++ A+  L GV+SVE++ +  K +V    E +  ++L+  +  G +A 
Sbjct: 7  MTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIEDAGYKAR 63

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 51.8 bits (125), Expect = 5e-10
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 34 KVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVE---ANKVLKKAKSTGKR 89
             M C GC  KV+ A+S L GV SV ++ +  KV+VTG  +     K+ K  +  G  
Sbjct: 4  VPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKAGYE 62

Length = 62

>gnl|CDD|215516 PLN02957, PLN02957, copper, zinc superoxide dismutase

 Score = 46.7 bits (111), Expect = 6e-07
 Identities = 21/56 (37%), Positives = 31/56 (55%)

Query: 35 VRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRA 90
          V M C+GC   VKN + +L GVK+VE++   Q V V G      +    + TG++A
Sbjct: 12 VDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKA 67

Length = 238

>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]

 Score = 39.7 bits (93), Expect = 2e-05
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 28 LQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEIN--RKQQKVSVTGYVEANKVLKKAK 84
          +    LKV  M C  C   V+ A+  + GV SV+++  +    V+        + + +A 
Sbjct: 1  MMKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAI 60

Length = 71

>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional

 Score = 38.6 bits (90), Expect = 6e-04
 Identities = 15/56 (26%), Positives = 26/56 (46%)

Query: 37  MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEI 92
           M C  C  +V+NA+ S+ GV    +N  ++   V G      +++  +  G  AE 
Sbjct: 108 MSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEA 163

Length = 834

>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 13/25 (52%), Positives = 17/25 (68%)

Query: 37 MDCDGCELKVKNAVSSLSGVKSVEI 61
          MDC  C  KV+NAV  L+GV  V++
Sbjct: 62 MDCPSCARKVENAVRQLAGVNQVQV 86

Length = 741

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	149
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.48
KOG4656	247	consensus Copper chaperone for superoxide dismutas	99.45
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.37
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	99.3
PLN02957	238	copper, zinc superoxide dismutase	98.67
PRK10671	834	copA copper exporting ATPase; Provisional	98.4
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.22
TIGR00003	68	copper ion binding protein. This model describes a	97.97
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.8
PRK10671	834	copA copper exporting ATPase; Provisional	97.4
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.32
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.11
TIGR02052	92	MerP mercuric transport protein periplasmic compon	94.72
PRK13748	561	putative mercuric reductase; Provisional	90.85
COG1888	97	Uncharacterized protein conserved in archaea [Func	90.67
PF02680	95	DUF211: Uncharacterized ArCR, COG1888; InterPro: I	89.54
cd00371	63	HMA Heavy-metal-associated domain (HMA) is a conse	88.3
PF01206	70	TusA: Sulfurtransferase TusA; InterPro: IPR001455	87.58
PRK11018	78	hypothetical protein; Provisional	80.14

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.48  E-value=2.8e-13  Score=84.97  Aligned_cols=58  Identities=36%  Similarity=0.619  Sum_probs=53.9

Q ss_pred             EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCc
Q 036289           32 DLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKR   89 (149)
Q Consensus        32 ~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~   89 (149)
                      +|+| +|+|++|+.+|+++|.+++||.++.+|+.+++++|.++   +++++|.++|+++||+
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCcC
Confidence            4789 99999999999999999999999999999999999965   4569999999999985

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=99.45  E-value=1.7e-13  Score=104.53  Aligned_cols=95  Identities=28%  Similarity=0.382  Sum_probs=81.9

Q ss_pred             ceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEccCCCCCcccCCCcc
Q 036289           28 LQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYNLVAQPYIA  107 (149)
Q Consensus        28 ~~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~~~~~~~~~~~~~~  107 (149)
                      .-+.+|.|.|+|++|+..|++.|..++||.+|++|++++.|.|.+...+++|..+|+.+|.+|.+.+....++++....-
T Consensus         6 ~~~~efaV~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~s~i~~~le~tGr~Avl~G~G~psaval~at~   85 (247)
T KOG4656|consen    6 TYEAEFAVQMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPPSEIQNTLENTGRDAVLRGAGKPSAVALLATV   85 (247)
T ss_pred             ceeEEEEEechhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCChHHHHHHHHhhChheEEecCCchhHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999999999999999988766665544333


Q ss_pred             cccC-CCCCCceeecC
Q 036289          108 GAYD-KRAPPGYVRKV  122 (149)
Q Consensus       108 ~~~~-~~~~~g~~~~~  122 (149)
                      +.|. ..+++|++||.
T Consensus        86 a~~~~~~~v~GvvRf~  101 (247)
T KOG4656|consen   86 AKYTGPQAVQGVVRFV  101 (247)
T ss_pred             HHhcCCccceeEEEEE
Confidence            4443 34789999984

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.37  E-value=4.7e-12  Score=82.13  Aligned_cols=65  Identities=26%  Similarity=0.473  Sum_probs=58.3

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE--e-cCCHHHHHHHHHhcCCceEEc
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT--G-YVEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~--g-~~~~~~I~~~I~~~G~~a~~~   93 (149)
                      .+..|.| +|+|.+|+..|+++|.+++||.++++++..+.+.|.  + .++.++|.++|+.+||++..+
T Consensus         2 ~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~~~   70 (71)
T COG2608           2 MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVEEI   70 (71)
T ss_pred             ceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCeeec
Confidence            4678999 999999999999999999999999999999777665  4 479999999999999988754

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.30  E-value=2.5e-11  Score=79.02  Aligned_cols=67  Identities=55%  Similarity=0.885  Sum_probs=62.0

Q ss_pred             ceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcC-CceEEcc
Q 036289           28 LQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTG-KRAEIWP   94 (149)
Q Consensus        28 ~~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G-~~a~~~~   94 (149)
                      +.+.++.+.|+|.+|..+|++.|..++||.++.+|...++++|.|.+++..|++.|++.| .++.+|.
T Consensus         4 ~~~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p~~vl~~l~k~~~k~~~~~~   71 (73)
T KOG1603|consen    4 IKTVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDPVKLLKKLKKTGGKRAELWK   71 (73)
T ss_pred             ccEEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEecCHHHHHHHHHhcCCCceEEec
Confidence            456778889999999999999999999999999999999999999999999999999988 7777775

>PLN02957 copper, zinc superoxide dismutase

Probab=98.67  E-value=3.2e-07  Score=72.25  Aligned_cols=72  Identities=29%  Similarity=0.444  Sum_probs=63.5

Q ss_pred             ceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEccCCCCC
Q 036289           28 LQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPYN   99 (149)
Q Consensus        28 ~~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~~~~~~   99 (149)
                      .+++++.++|.|..|+.+|++.|.+++||..+.+++..++++|.......++.+.|++.||.+++++..+.+
T Consensus         5 ~~~~~~~VgMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~~   76 (238)
T PLN02957          5 ELLTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKARLIGQGDPE   76 (238)
T ss_pred             cEEEEEEECccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCCHHHHHHHHHHcCCcEEEecCCCcc
Confidence            345667889999999999999999999999999999999999987778899999999999999988764443

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.40  E-value=1e-06  Score=80.26  Aligned_cols=63  Identities=25%  Similarity=0.480  Sum_probs=56.5

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEc
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~   93 (149)
                      +++++.| ||+|.+|+.+|+++|.+++||.++++++.  +.++.+..+.+.+.+.+++.||+++..
T Consensus         3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~~~~~i~~~i~~~Gy~~~~~   66 (834)
T PRK10671          3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTASAEALIETIKQAGYDASVS   66 (834)
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecCCHHHHHHHHHhcCCccccc
Confidence            5688999 99999999999999999999999999994  556666678999999999999999875

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.22  E-value=4.5e-06  Score=74.87  Aligned_cols=63  Identities=22%  Similarity=0.487  Sum_probs=56.4

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CC-HHHHHHHHHhcCCceEE
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VE-ANKVLKKAKSTGKRAEI   92 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~-~~~I~~~I~~~G~~a~~   92 (149)
                      .+..+.| ||+|..|+.+|| +|.+++||..+.+|+.++++.|..+   .+ .+++...++..||.+..
T Consensus         2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy~~~~   69 (713)
T COG2217           2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGYSARL   69 (713)
T ss_pred             ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcCccccc
Confidence            3567999 999999999999 9999999999999999999998843   44 78999999999998765

>TIGR00003 copper ion binding protein

Probab=97.97  E-value=0.00013  Score=42.69  Aligned_cols=60  Identities=22%  Similarity=0.343  Sum_probs=50.1

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCc
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKR   89 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~   89 (149)
                      +..+.+ ++.|..|...+++.+...+++....+++...++.+..   ..+...+...+...|+.
T Consensus         3 ~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   66 (68)
T TIGR00003         3 KFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILDAGYE   66 (68)
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence            456889 9999999999999999999999999999999988763   24667777777777764

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.80  E-value=6.7e-05  Score=68.17  Aligned_cols=68  Identities=28%  Similarity=0.460  Sum_probs=62.2

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEccCC
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIWPYV   96 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~~~~   96 (149)
                      .++.|.| ||.|.+|+.+|++.|.+++||.++++++.++++.|..   .+.+.++++.|+.+|+.+.+.++.
T Consensus       146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~~~~~~~~~~  217 (951)
T KOG0207|consen  146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETGFEASVRPYG  217 (951)
T ss_pred             CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHHhhcccceeeecc
Confidence            6889999 9999999999999999999999999999999999873   378999999999999998877643

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.40  E-value=0.00067  Score=62.05  Aligned_cols=65  Identities=25%  Similarity=0.445  Sum_probs=57.2

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEcc
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      ++.+.+ ||+|..|...+++.+..++||.++.+++..+++.+.+..+.+++.+.+++.||.+.++.
T Consensus       100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~~~Gy~a~~~~  165 (834)
T PRK10671        100 SQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAIE  165 (834)
T ss_pred             eEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHHhcCCCccccc
Confidence            567889 99999999999999999999999999999999888765678888888999999876543

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.32  E-value=0.00069  Score=61.80  Aligned_cols=69  Identities=19%  Similarity=0.298  Sum_probs=61.3

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEccC
Q 036289           27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIWPY   95 (149)
Q Consensus        27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~~~   95 (149)
                      ...+..+.+ ||+|..|+..+++.|++++||.++.+.+...+..+..+   +.++.+.+.+++.|+.+++...
T Consensus        67 ~~~~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~~~~~e~ie~~gf~a~~i~~  139 (951)
T KOG0207|consen   67 TASKCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSPDSIAESIEDLGFSAELIES  139 (951)
T ss_pred             ccceeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCchhHHHHHHhcCccceehhc
Confidence            344678999 99999999999999999999999999999999998733   7889999999999999987653

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.11  E-value=0.002  Score=58.39  Aligned_cols=66  Identities=29%  Similarity=0.319  Sum_probs=54.3

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec-CCHHHHHHHHHhcCCceEEc
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY-VEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~-~~~~~I~~~I~~~G~~a~~~   93 (149)
                      ..+..+.+ +|+|.+|..++++.+.+++||..+.+++..+++.+..+ ...+++.+.++..||.+..+
T Consensus        52 ~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~~~I~~aI~~~Gy~a~~~  119 (741)
T PRK11033         52 GTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAGFSLRDE  119 (741)
T ss_pred             CceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccchHHHHHHHHhcccccccc
Confidence            44667889 99999999999999999999999999999999877632 12267777888899987644

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=94.72  E-value=0.61  Score=29.38  Aligned_cols=63  Identities=25%  Similarity=0.422  Sum_probs=47.0

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEE
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEI   92 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~   92 (149)
                      +..+.+ ++.|..|...++..+...+++....++.......+..   ......+...+...|+.+++
T Consensus        24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   90 (92)
T TIGR02052        24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDAGYPSSL   90 (92)
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            456778 9999999999999999999988888888777755541   23555555566677776544

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>PRK13748 putative mercuric reductase; Provisional

Probab=90.85  E-value=2.1  Score=37.29  Aligned_cols=64  Identities=23%  Similarity=0.408  Sum_probs=50.3

Q ss_pred             EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEEccC
Q 036289           32 DLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG--YVEANKVLKKAKSTGKRAEIWPY   95 (149)
Q Consensus        32 ~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g--~~~~~~I~~~I~~~G~~a~~~~~   95 (149)
                      .+.+ ++.|..|..+++..+...+++....+++......+..  ......+...++..|+..+....
T Consensus         3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~~~~~~i~~~i~~~g~~~~~~~~   69 (561)
T PRK13748          3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGTSPDALTAAVAGLGYRATLADA   69 (561)
T ss_pred             EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCeeeccCc
Confidence            3567 9999999999999999999999888998888866652  24556666667788887766654

>COG1888 Uncharacterized protein conserved in archaea [Function unknown]

Probab=90.67  E-value=2.6  Score=28.58  Aligned_cols=68  Identities=16%  Similarity=0.260  Sum_probs=44.9

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEec-----C--CCEEEEEec-CCHHHHHHHHHhcCCceEEcc
Q 036289           27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINR-----K--QQKVSVTGY-VEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl-----~--~~~v~V~g~-~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      ..+++.+.+ .-+-.--.--+-+.|.+++||..|++.+     +  +-+++|.|. ++.++|.+.|++.|....-..
T Consensus         4 ~iRRlVLDvlKP~~~p~ive~A~~lskl~gVegVNItv~eiD~et~~~~itIeG~~ldydei~~~iE~~Gg~IHSiD   80 (97)
T COG1888           4 GIRRLVLDVLKPHRGPTIVELALELSKLEGVEGVNITVTEIDVETENLKITIEGTNLDYDEIEEVIEELGGAIHSID   80 (97)
T ss_pred             cceeeeeeecCCcCCCcHHHHHHHHhhcCCcceEEEEEEEeeehhcceEEEEEcCCCCHHHHHHHHHHcCCeeeehh
Confidence            345566666 4443333345566788888888777532     3  334556664 899999999999998765543

>PF02680 DUF211: Uncharacterized ArCR, COG1888; InterPro: IPR003831 This entry describes proteins of unknown function

Probab=89.54  E-value=3  Score=28.41  Aligned_cols=65  Identities=17%  Similarity=0.320  Sum_probs=43.5

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEe-----cCCCEE--EEEec-CCHHHHHHHHHhcCCceEEc
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEIN-----RKQQKV--SVTGY-VEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vd-----l~~~~v--~V~g~-~~~~~I~~~I~~~G~~a~~~   93 (149)
                      .+++.|.| ..+-+.- -.+-+.|.+++||..|++.     .....+  +|+|. ++.++|.++|++.|-.+.-.
T Consensus         4 irRlVLDVlKP~~p~i-~e~A~~l~~~~gV~gVnitv~EvD~ete~lkitiEG~~id~d~i~~~Ie~~Gg~IHSI   77 (95)
T PF02680_consen    4 IRRLVLDVLKPHEPSI-VELAKALSELEGVDGVNITVVEVDVETENLKITIEGDDIDFDEIKEAIEELGGVIHSI   77 (95)
T ss_dssp             EEEEEEEEEEESSS-H-HHHHHHHHTSTTEEEEEEEEEEE-SSEEEEEEEEEESSE-HHHHHHHHHHTT-EEEEE
T ss_pred             eeEEEEEeecCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEeCCCCHHHHHHHHHHcCCeEEee
Confidence            45677777 4444443 4566779999999988754     333433  45565 89999999999999766543

; PDB: 3BPD_I 2RAQ_F 2X3D_E.

>cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

Probab=88.30  E-value=2.3  Score=21.83  Aligned_cols=38  Identities=39%  Similarity=0.712  Sum_probs=30.0

Q ss_pred             EE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE
Q 036289           34 KV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT   71 (149)
Q Consensus        34 ~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~   71 (149)
                      .+ ++.|..|...++..+....++.....++......+.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   41 (63)
T cd00371           3 SVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVE   41 (63)
T ss_pred             eECCeEcHHHHHHHHHHHhcCCCEeEEEEEccCCEEEEE
Confidence            35 788999999999988888898777777766665554

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.

>PF01206 TusA: Sulfurtransferase TusA; InterPro: IPR001455 SirA functions as a response regulator as part of a two-component system, where BarA is the sensor kinase

Probab=87.58  E-value=2.3  Score=26.53  Aligned_cols=54  Identities=17%  Similarity=0.166  Sum_probs=39.2

Q ss_pred             EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEEcc
Q 036289           32 DLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG--YVEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        32 ~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g--~~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      ++.+ |+.|+...-+++++|.+++.         .+.+.|..  ......|...++..|+...-+.
T Consensus         2 ~lD~rg~~CP~Pll~~~~~l~~l~~---------G~~l~v~~d~~~~~~di~~~~~~~g~~~~~~~   58 (70)
T PF01206_consen    2 TLDLRGLSCPMPLLKAKKALKELPP---------GEVLEVLVDDPAAVEDIPRWCEENGYEVVEVE   58 (70)
T ss_dssp             EEECSS-STTHHHHHHHHHHHTSGT---------T-EEEEEESSTTHHHHHHHHHHHHTEEEEEEE
T ss_pred             EEeCCCCCCCHHHHHHHHHHHhcCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence            5778 99999999999999998743         23444442  3456889999999999865543

This system increases the expression of virulence genes and decreases the expression of motility genes []. BarA phosphorylates SirA, thereby activating the protein. Phosphorylated SirA directly activates virulence expression by interacting with hilA and hilC promoters, while repressing the flagellar regulon indirectly by binding to the csrB promoter, which in turn affects flagellar gene expression. Orthologues of SirA from Salmonella spp. can be found throughout proteobacteria, such as GacA in Psuedomonas spp., VarA in Vibrio cholerae, ExpA in Erwinia carotovora, LetA in Legionella pneumophila, and UvrY in Escherichia coli []. A sensor kinase for SirA is present in each of these organisms as well; the sensor kinase is known as BarA in E. coli and Salmonella spp., but has different names in other genera. In different species, SirA/BarA orthologues are required for virulence gene expression, exoenzyme and antibiotic production, motility, and biofilm formation. The structure of SirA consists of an alpha/beta sandwich with a beta-alpha-beta-alpha-beta(2) fold, comprising a mixed four-stranded beta-sheet stacked against two alpha-helices, both of which are nearly parallel to the strands of the beta-sheet []. Several uncharacterised bacterial proteins (73 to 81 amino-acid residues in length) that contain a well-conserved region in their N-terminal region show structural similarity to the SirA protein, including the E. coli protein YedF (P0AA31 from SWISSPROT), and other members of the UPF0033 family.; GO: 0016783 sulfurtransferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 3LVJ_D 3LVK_B 1DCJ_A 3HZ7_A 1JDQ_A 1JE3_A 1PAV_A.

>PRK11018 hypothetical protein; Provisional

Probab=80.14  E-value=11  Score=24.28  Aligned_cols=55  Identities=15%  Similarity=0.079  Sum_probs=41.0

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceEEc
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT--GYVEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~--g~~~~~~I~~~I~~~G~~a~~~   93 (149)
                      ..++.+ |..|+.-.-+.+++|.+++.-         +.+.|.  .......|...+++.|+++...
T Consensus         8 ~~~lD~rG~~CP~Pvl~~kk~l~~l~~G---------~~L~V~~d~~~a~~di~~~~~~~G~~v~~~   65 (78)
T PRK11018          8 DYRLDMVGEPCPYPAVATLEALPQLKKG---------EILEVVSDCPQSINNIPLDARNHGYTVLDI   65 (78)
T ss_pred             CeeEECCCCcCCHHHHHHHHHHHhCCCC---------CEEEEEeCCccHHHHHHHHHHHcCCEEEEE
Confidence            356888 999999999999999988532         233333  3356678888999999987643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	149
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	1e-22
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	4e-21
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	3e-18
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	5e-18
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	8e-17
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	2e-08
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	2e-07
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	3e-07
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	7e-06
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	2e-05
2kkh_A	95	Putative heavy metal transporter; zinc transport,	3e-05
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	4e-05
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	4e-05
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	7e-05
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	7e-05
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	9e-05
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	9e-05
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	1e-04
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	2e-04
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	2e-04
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	2e-04
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	2e-04
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	5e-04
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	9e-04

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 84.9 bits (210), Expect = 1e-22
 Identities = 19/78 (24%), Positives = 39/78 (50%)

Query: 16 SSGHKHKKKKKQLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVE 75
          S        +  L T++  V+M C  C   V+ ++  ++GV+ VE++ + Q V V   + 
Sbjct: 6  SGMASDSGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLP 65

Query: 76 ANKVLKKAKSTGKRAEIW 93
          + +V    + TG++A + 
Sbjct: 66 SQEVQALLEGTGRQAVLK 83

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 84.3 bits (208), Expect = 4e-21
 Identities = 20/96 (20%), Positives = 37/96 (38%)

Query: 31  VDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRA 90
               + M C+ C   +K  + ++ G+ S+  + +QQ +SV   V  + ++   ++ GK A
Sbjct: 8   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 67

Query: 91  EIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKVEGTA 126
            I      N  A   +               V G A
Sbjct: 68  IIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLA 103

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 72.8 bits (179), Expect = 3e-18
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 28 LQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTG 87
          +   +  V M C GC   V   ++ L GVK  +I+   +KV +      + +L   K TG
Sbjct: 1  MPKHEFSVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTG 59

Query: 88 KRAEIW 93
          K     
Sbjct: 60 KTVSYL 65

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 76.7 bits (188), Expect = 5e-18
 Identities = 19/95 (20%), Positives = 36/95 (37%)

Query: 31  VDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRA 90
               + M C+ C   +K  + ++ G+ S+  + +QQ +SV   V  + ++   ++ GK A
Sbjct: 9   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 68

Query: 91  EIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKVEGT 125
            I      N  A   +               V G 
Sbjct: 69  IIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGL 103

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 69.4 bits (170), Expect = 8e-17
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 27 QLQTVDLKVRMDCDGCELKVKNAVSSL-SGVKSVEINRKQQKVSVTGYVEANKVLKKAKS 85
          +++     V M C GC   V   ++ L   V  ++I+ ++Q V V   +  + +L+K K 
Sbjct: 3  EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKK 62

Query: 86 TGKRA 90
          TGK  
Sbjct: 63 TGKEV 67

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 47.9 bits (114), Expect = 2e-08
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 7/85 (8%)

Query: 14 MGSSGHKHKK------KKKQLQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQ 66
          MGSS H H           Q   +   V  M C  C   +K A+       +V  +   +
Sbjct: 1  MGSSHHHHHHSSGRENLYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASR 60

Query: 67 KVSVTGYVEANKVLKKAKSTGKRAE 91
           V V G  +A  + +   + G   E
Sbjct: 61 TVVVGGVSDAAHIAEIITAAGYTPE 85

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 44.6 bits (106), Expect = 2e-07
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 30 TVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGK 88
          T+ L V  + C+ C   V  AV +     +V+++   +KV++T  +   ++     S G 
Sbjct: 2  TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGY 61

Query: 89 RAE 91
            E
Sbjct: 62 EVE 64

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 44.2 bits (105), Expect = 3e-07
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 31 VDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKR 89
          + LKV  M C+ C + V  A+  + GV+ VE++ ++ +  V G  +   +++  +  G +
Sbjct: 2  LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYK 61

Query: 90 AEI 92
          AE+
Sbjct: 62 AEV 64

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 40.7 bits (96), Expect = 7e-06
 Identities = 12/56 (21%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 30 TVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEAN-KVLKKA 83
              +V  + C+ C  K++  V  + GV  ++++ +++ V V     A   ++K+A
Sbjct: 2  KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEA 57

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71

 Score = 39.7 bits (93), Expect = 2e-05
 Identities = 12/55 (21%), Positives = 21/55 (38%)

Query: 37 MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAE 91
          + C  C  K +  V  + GV    +N    K++VTG     +V +       +  
Sbjct: 12 LSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASIQQVEQAGAFEHLKII 66

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95

 Score = 39.8 bits (93), Expect = 3e-05
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 17 SGHKHKKKKKQLQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---G 72
          +  + KKK K+LQ     V  + C      ++N + SL GVK   +    + V V     
Sbjct: 4  NKEEEKKKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSL 63

Query: 73 YVEANKVLKKAKSTGKRAEI 92
           +   ++ K        A +
Sbjct: 64 LISPFQIAKALNEARLEANV 83

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69

 Score = 38.8 bits (91), Expect = 4e-05
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 28 LQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT 71
          ++   L+V  M C  C   V+ +V  L GV +V +N +  KV V+
Sbjct: 1  MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVS 45

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72

 Score = 38.4 bits (90), Expect = 4e-05
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 29 QTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT 71
          QTV L V  M C  C + VK A+S + GV  V++  + ++  VT
Sbjct: 3  QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVT 46

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75

 Score = 38.1 bits (89), Expect = 7e-05
 Identities = 7/45 (15%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 28 LQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT 71
          + +V + V  M C+ C   ++  +  ++GV  ++++ +++  ++ 
Sbjct: 1  VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATII 45

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 40.0 bits (93), Expect = 7e-05
 Identities = 16/108 (14%), Positives = 38/108 (35%), Gaps = 7/108 (6%)

Query: 27  QLQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSV------TGYVEANKV 79
            + T+ L++  M C  C L ++  +  L GV+S++++ + +   V      T  V   + 
Sbjct: 18  HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRA 77

Query: 80  LKKAKSTGKRAEIWPYVPYNLVAQPYIAGAYDKRAPPGYVRKVEGTAT 127
           ++       +  +      +       +       P   V+    T  
Sbjct: 78  IEALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGSPPRNQVQGTCSTTL 125

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79

 Score = 38.1 bits (89), Expect = 9e-05
 Identities = 7/46 (15%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 27 QLQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT 71
           + +V + V  M C+ C   ++  +  ++GV  ++++ +++  ++ 
Sbjct: 6  GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATII 51

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71

 Score = 37.6 bits (88), Expect = 9e-05
 Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 27 QLQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT 71
           ++ + L+V  M C  C   ++++V  L+GV+ V++   +  V VT
Sbjct: 3  AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVT 48

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 38.6 bits (90), Expect = 1e-04
 Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 27 QLQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEANKVLKK 82
          + + + ++V  M C  C  +++  +  + GV    +N   + V+V           + +K
Sbjct: 4  EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEK 63

Query: 83 AKSTGKRAEIW 93
           +  G      
Sbjct: 64 IEKLGYHVVTE 74

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 9/70 (12%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 27  QLQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEANKVLKK 82
             +  +  +  M C  C  +++  ++ + GV +  +N   + V+V         + + + 
Sbjct: 72  VTEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEA 131

Query: 83  AKSTGKRAEI 92
               G + ++
Sbjct: 132 VDKLGYKLKL 141

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74

 Score = 36.9 bits (86), Expect = 2e-04
 Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 28 LQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT 71
          ++ + + V  M C  C   V+ A+ +++GV    +   Q +  V 
Sbjct: 1  MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVV 45

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71

 Score = 36.6 bits (85), Expect = 2e-04
 Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 29 QTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT--GYVEANKVLKKAKS 85
          QT++L++  M C  C   ++ A++ + GV+S ++N   ++  V+  G      +    + 
Sbjct: 3  QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVER 62

Query: 86 TGKRAEI 92
           G  A +
Sbjct: 63 AGYHARV 69

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73

 Score = 36.6 bits (85), Expect = 2e-04
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 29 QTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKA 83
               KV  MDC  C  KV+NAV  L+GV  V++    +K+ V    +    ++ A
Sbjct: 3  TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESA 58

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 37.3 bits (87), Expect = 5e-04
 Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 29 QTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEANKVLKKAK 84
          Q   L+++ M C  C   ++  +   +GV SV +     K  +      ++  ++ +  +
Sbjct: 4  QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ 63

Query: 85 STGKRAEI 92
            G  A +
Sbjct: 64 DLGFEAAV 71

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 36.6 bits (85), Expect = 9e-04
 Identities = 10/75 (13%), Positives = 27/75 (36%), Gaps = 4/75 (5%)

Query: 22  KKKKKQLQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEAN 77
           +        ++L +  M C  C   +++ ++  +G+    +     K  V      +   
Sbjct: 73  EDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPR 132

Query: 78  KVLKKAKSTGKRAEI 92
            ++K  +  G  A +
Sbjct: 133 DIIKIIEEIGFHASL 147

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	149
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.59
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.51
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.5
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.47
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.47
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.37
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.33
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.33
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.33
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.32
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.31
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.3
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.29
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.28
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.27
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.27
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.27
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.27
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.27
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	99.24
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.23
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	99.23
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.23
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.21
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	99.21
2kkh_A	95	Putative heavy metal transporter; zinc transport,	99.21
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	99.21
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	99.19
2kyz_A	67	Heavy metal binding protein; structural genomics,	99.18
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	99.16
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	99.15
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	99.14
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.13
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	99.1
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	99.04
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	99.02
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.98
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.95
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.69
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.64
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.6
3bpd_A	100	Uncharacterized protein; heptamer, Mg+2 ION, PSI-2	89.98
2raq_A	97	Conserved protein MTH889; alpha-beta protein, stru	88.36
2x3d_A	96	SSO6206; unknown function; 2.70A {Sulfolobus solfa	87.7
3lvj_C	82	Sulfurtransferase TUSA; protein-protein complex, s	83.34
1jdq_A	98	TM006 protein, hypothetical protein TM0983; struct	81.17
3cq1_A	103	Putative uncharacterized protein TTHB138; DTDP-4-k	81.17

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.59  E-value=6e-15  Score=92.76  Aligned_cols=67  Identities=25%  Similarity=0.459  Sum_probs=62.1

Q ss_pred             ceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEccC
Q 036289           28 LQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPY   95 (149)
Q Consensus        28 ~~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~~   95 (149)
                      |.+.+|.|||+|.+|+.+|+++|.+++|| ++++|+..++++|.+.+++++|.++|+++||++.+|+.
T Consensus         1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~   67 (68)
T 3iwl_A            1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL   67 (68)
T ss_dssp             -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred             CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence            34677888999999999999999999999 99999999999999989999999999999999998874

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.51  E-value=1.8e-13  Score=85.37  Aligned_cols=64  Identities=25%  Similarity=0.527  Sum_probs=59.8

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceEE
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT--GYVEANKVLKKAKSTGKRAEI   92 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~--g~~~~~~I~~~I~~~G~~a~~   92 (149)
                      +++.|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|.  +.+++++|.++|+++||++++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~   68 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV   68 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEe
Confidence            4678999 999999999999999999999999999999999998  558899999999999999876

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.50  E-value=1.3e-13  Score=87.20  Aligned_cols=67  Identities=22%  Similarity=0.394  Sum_probs=61.8

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEcc
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      |++++|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|..+   ++.++|.++|+++||+++++.
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA   71 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence            56788999 99999999999999999999999999999999999742   689999999999999998875

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.47  E-value=5.4e-13  Score=84.37  Aligned_cols=67  Identities=27%  Similarity=0.435  Sum_probs=62.2

Q ss_pred             ceEEEEEEcCcChhHHHHHHHHHhCCC-CeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEcc
Q 036289           28 LQTVDLKVRMDCDGCELKVKNAVSSLS-GVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        28 ~~~v~l~Vgm~C~~C~~kV~k~L~~~~-GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      +.++.|.|.|+|.+|+.+|+++|.+++ ||.++++|+..++++|.+..+.++|.+.|+++||++.+|.
T Consensus         4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   71 (73)
T 1cc8_A            4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK   71 (73)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence            456778889999999999999999999 9999999999999999988899999999999999998775

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.47  E-value=2.4e-13  Score=86.30  Aligned_cols=66  Identities=20%  Similarity=0.429  Sum_probs=62.2

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEcc
Q 036289           27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      .|.+++|.| ||+|.+|+.+|+++|.+ +||..+.+|+..++++|..+ ++++|.++|+++||.+.+.+
T Consensus         3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~   69 (73)
T 3fry_A            3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRS   69 (73)
T ss_dssp             CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECC
T ss_pred             ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecC
Confidence            367789999 99999999999999999 99999999999999999987 99999999999999998876

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.37  E-value=5.2e-12  Score=85.16  Aligned_cols=71  Identities=25%  Similarity=0.419  Sum_probs=64.9

Q ss_pred             cceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEccCCC
Q 036289           27 QLQTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVP   97 (149)
Q Consensus        27 ~~~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~~~~   97 (149)
                      .+.+++|.|.|+|.+|+.+|+++|.+++||..+++|+..++++|...++.++|.+.|+++||.+.++...+
T Consensus        17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~   87 (98)
T 2crl_A           17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGS   87 (98)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCC
T ss_pred             cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCC
Confidence            45677888899999999999999999999999999999999999988899999999999999999887543

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.33  E-value=1.3e-11  Score=76.30  Aligned_cols=64  Identities=23%  Similarity=0.435  Sum_probs=58.0

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCce
Q 036289           27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRA   90 (149)
Q Consensus        27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a   90 (149)
                      .+.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..   .++.++|.+.|+++||.+
T Consensus         3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   70 (71)
T 2l3m_A            3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV   70 (71)
T ss_dssp             SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence            466788999 9999999999999999999999999999999999873   367899999999999975

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.33  E-value=3.5e-12  Score=78.50  Aligned_cols=62  Identities=27%  Similarity=0.559  Sum_probs=57.0

Q ss_pred             EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEc
Q 036289           32 DLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        32 ~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~   93 (149)
                      .|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.+..+.++|.+.|+++||.+...
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~   65 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL   65 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence            5889 9999999999999999999999999999999999976678999999999999987653

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.33  E-value=3.4e-12  Score=77.21  Aligned_cols=60  Identities=22%  Similarity=0.427  Sum_probs=56.3

Q ss_pred             EEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCce
Q 036289           31 VDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRA   90 (149)
Q Consensus        31 v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a   90 (149)
                      ..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.+..+.++|.+.|+++||.+
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~   63 (64)
T 2xmm_A            3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV   63 (64)
T ss_dssp             EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred             EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            46899 9999999999999999999999999999999999997788999999999999975

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.32  E-value=1.8e-11  Score=75.74  Aligned_cols=66  Identities=30%  Similarity=0.474  Sum_probs=58.7

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEc
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~   93 (149)
                      +.++.|.| ||+|.+|+.+|++.|.+++||.++.+|+..++++|..   ..+.++|.+.|+++||.+.+.
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1osd_A            2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence            35678999 9999999999999999999999999999999999874   257889999999999987653

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.31  E-value=2.4e-11  Score=74.79  Aligned_cols=64  Identities=22%  Similarity=0.447  Sum_probs=57.0

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEE
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY--VEANKVLKKAKSTGKRAEI   92 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~--~~~~~I~~~I~~~G~~a~~   92 (149)
                      .++.|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|..+  ++.++|.+.|+++||.+.+
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~   69 (71)
T 2xmw_A            3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV   69 (71)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred             cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence            4567999 99999999999999999999999999999999998743  6788899999999998764

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.30  E-value=4.4e-12  Score=83.32  Aligned_cols=66  Identities=20%  Similarity=0.266  Sum_probs=58.8

Q ss_pred             cCcceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCce
Q 036289           25 KKQLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRA   90 (149)
Q Consensus        25 ~~~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a   90 (149)
                      ...+.++.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|...++.++|.+.|+++||.+
T Consensus        18 ~~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~   84 (85)
T 2k2p_A           18 YFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP   84 (85)
T ss_dssp             ----CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred             cccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            34567788999 9999999999999999999999999999999999998788999999999999975

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.29  E-value=3.6e-11  Score=75.17  Aligned_cols=66  Identities=29%  Similarity=0.325  Sum_probs=58.3

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecC-CHHHHHHHHHhcCCceEEc
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYV-EANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~-~~~~I~~~I~~~G~~a~~~   93 (149)
                      |.++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+. ..++|.+.|+.+||.+...
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~   69 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE   69 (73)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred             CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence            56778999 999999999999999999999999999999999998542 3678899999999987653

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.28  E-value=1.9e-11  Score=78.97  Aligned_cols=70  Identities=17%  Similarity=0.346  Sum_probs=62.2

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEccCCC
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIWPYVP   97 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~~~~~   97 (149)
                      ..++.|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+   ++.++|.+.|+.+||.+.+.....
T Consensus         8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~   81 (84)
T 1q8l_A            8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQPK   81 (84)
T ss_dssp             CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCTT
T ss_pred             ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCCcc
Confidence            45678999 99999999999999999999999999999999999743   578899999999999988877543

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.27  E-value=3.2e-11  Score=74.54  Aligned_cols=64  Identities=17%  Similarity=0.309  Sum_probs=57.7

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEc
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~   93 (149)
                      +..|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+   ++.++|.+.|+++||.+.+.
T Consensus         4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1aw0_A            4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence            567999 99999999999999999999999999999999999743   57889999999999987653

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.27  E-value=5.1e-11  Score=74.59  Aligned_cols=65  Identities=15%  Similarity=0.379  Sum_probs=58.6

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEcc
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      ++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+   ++.++|.+.|+++||.+.+..
T Consensus         3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (75)
T 3cjk_B            3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   71 (75)
T ss_dssp             EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence            467999 99999999999999999999999999999999999743   578899999999999887654

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.27  E-value=3.8e-11  Score=74.71  Aligned_cols=67  Identities=18%  Similarity=0.378  Sum_probs=59.8

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEc
Q 036289           27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~   93 (149)
                      ++.+..|.| ||+|.+|+.+|++.|.+++||..+.+|+..+++.|..   ..+.++|.+.|+.+||.+..+
T Consensus         4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   74 (76)
T 1opz_A            4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE   74 (76)
T ss_dssp             CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred             cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence            356778999 9999999999999999999999999999999999873   357889999999999987655

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.27  E-value=2.8e-11  Score=79.76  Aligned_cols=68  Identities=21%  Similarity=0.285  Sum_probs=60.3

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhc---CCceEEccCC
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKST---GKRAEIWPYV   96 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~---G~~a~~~~~~   96 (149)
                      .++.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..   .++.++|.++|+++   ||++.++.+.
T Consensus         3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~   77 (90)
T 2g9o_A            3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEV   77 (90)
T ss_dssp             EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC
T ss_pred             cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCC
Confidence            3567999 9999999999999999999999999999999999974   35788999999999   5999887754

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.27  E-value=5e-11  Score=72.24  Aligned_cols=62  Identities=27%  Similarity=0.442  Sum_probs=55.9

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCce
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRA   90 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a   90 (149)
                      .+..|.| ||+|.+|+.+|++.|..++||..+.+++..++++|..   ..+.+.|.+.|+.+||.+
T Consensus         2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   67 (69)
T 2qif_A            2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            4567999 9999999999999999999999999999999999873   367889999999999975

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=99.24  E-value=2e-11  Score=77.06  Aligned_cols=67  Identities=15%  Similarity=0.243  Sum_probs=60.3

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEcc
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      |.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|...   ++.++|.+.|+.+||.+.++.
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   72 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE   72 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence            56778999 99999999999999999999999999999999999743   578899999999999987754

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.23  E-value=5.5e-11  Score=73.48  Aligned_cols=65  Identities=26%  Similarity=0.386  Sum_probs=58.8

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEEcc
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG--YVEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g--~~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      ++.|.| ||+|.+|+.+|++.|.+++||..+.+++..++++|..  .++.++|.+.|++.||.+.++.
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~   70 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence            457899 9999999999999999999999999999999999874  3578899999999999988765

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=99.23  E-value=4.1e-11  Score=75.85  Aligned_cols=67  Identities=15%  Similarity=0.380  Sum_probs=60.0

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEcc
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      ..++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+   ++.++|.+.|+++||.+.+..
T Consensus         7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   77 (79)
T 1kvi_A            7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   77 (79)
T ss_dssp             CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence            55678999 99999999999999999999999999999999999743   578899999999999887654

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.23  E-value=5.8e-11  Score=72.45  Aligned_cols=61  Identities=31%  Similarity=0.554  Sum_probs=55.7

Q ss_pred             EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEE
Q 036289           32 DLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEI   92 (149)
Q Consensus        32 ~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~   92 (149)
                      .|.| ||+|.+|+.+|++.|.+++||..+.+|+..++++|..+   .+.++|.+.|++.||.+++
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   67 (68)
T 1cpz_A            3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV   67 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred             EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence            5889 99999999999999999999999999999999999743   5788999999999998765

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.21  E-value=7.2e-11  Score=72.60  Aligned_cols=62  Identities=23%  Similarity=0.407  Sum_probs=55.9

Q ss_pred             EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEEc
Q 036289           32 DLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY--VEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        32 ~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~--~~~~~I~~~I~~~G~~a~~~   93 (149)
                      .|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+  ...++|.+.|+++||.+.+.
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   67 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA   67 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence            4789 99999999999999999999999999999999998733  57889999999999987653

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=99.21  E-value=8e-11  Score=74.31  Aligned_cols=68  Identities=13%  Similarity=0.317  Sum_probs=60.5

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEccC
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIWPY   95 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~~~   95 (149)
                      |.+..|.| ||+|.+|+.+|++.|.+++||..+.+|+..+++.|..   ..+.++|.+.|+.+||.+.++..
T Consensus         2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~   73 (80)
T 1jww_A            2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE   73 (80)
T ss_dssp             CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCS
T ss_pred             ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCc
Confidence            45678999 9999999999999999999999999999999999873   35788999999999999887663

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=99.21  E-value=1.5e-10  Score=76.56  Aligned_cols=71  Identities=21%  Similarity=0.225  Sum_probs=63.1

Q ss_pred             cCcceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEccC
Q 036289           25 KKQLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIWPY   95 (149)
Q Consensus        25 ~~~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~~~   95 (149)
                      ...+.++.|.| ||+|.+|+.+|+++|..++||..+.+++..+++.|...   ++.+.|.+.|+.+||.+.+...
T Consensus        12 ~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   86 (95)
T 2kkh_A           12 VKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVN   86 (95)
T ss_dssp             SSCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCC
T ss_pred             ccceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecC
Confidence            34577889999 99999999999999999999999999999999999743   5788999999999999887664

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=99.21  E-value=7.6e-11  Score=71.51  Aligned_cols=61  Identities=16%  Similarity=0.359  Sum_probs=54.8

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCce
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY--VEANKVLKKAKSTGKRA   90 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~--~~~~~I~~~I~~~G~~a   90 (149)
                      +..|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+  .+.++|.+.|+++||.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~   65 (66)
T 1yg0_A            2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV   65 (66)
T ss_dssp             EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred             eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence            356889 99999999999999999999999999999999999743  47888999999999864

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=99.19  E-value=6.3e-11  Score=72.47  Aligned_cols=64  Identities=22%  Similarity=0.401  Sum_probs=56.9

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceE
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAE   91 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~   91 (149)
                      +.+..|.| ||+|.+|+.+|++.|.+++||..+.+++..++++|..   ..+.++|.+.++.+||.+.
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   69 (71)
T 2ldi_A            2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA   69 (71)
T ss_dssp             CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence            45667999 9999999999999999999999999999999999873   3567889999999999764

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=99.18  E-value=5e-11  Score=73.51  Aligned_cols=60  Identities=30%  Similarity=0.473  Sum_probs=54.2

Q ss_pred             EEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEE
Q 036289           31 VDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEI   92 (149)
Q Consensus        31 v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~   92 (149)
                      ..|.| ||+|.+|+.+|+++|.++ ||..+.+|+..++++|..+.+ ++|.+.|+++||.+..
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~   63 (67)
T 2kyz_A            3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVES   63 (67)
T ss_dssp             EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCB
T ss_pred             EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceee
Confidence            56899 999999999999999999 999999999999999986544 8899999999997654

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=99.16  E-value=1.4e-10  Score=72.17  Aligned_cols=64  Identities=16%  Similarity=0.343  Sum_probs=56.8

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEc
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~   93 (149)
                      ++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+   ++.++|.+.|+.+||.+.+.
T Consensus         5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   72 (75)
T 1yjr_A            5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV   72 (75)
T ss_dssp             CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence            457899 99999999999999999999999999999999999743   45688999999999987654

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=99.14  E-value=2.1e-10  Score=81.14  Aligned_cols=68  Identities=13%  Similarity=0.317  Sum_probs=61.5

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEccC
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIWPY   95 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~~~   95 (149)
                      ..++.|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|..   .+++++|.+.|+++||.+.++..
T Consensus        73 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~  144 (151)
T 1p6t_A           73 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE  144 (151)
T ss_dssp             CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred             ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCc
Confidence            35678999 9999999999999999999999999999999999983   36889999999999999887664

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.13  E-value=2.1e-10  Score=80.80  Aligned_cols=65  Identities=15%  Similarity=0.334  Sum_probs=59.0

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEc
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~G~~a~~~   93 (149)
                      .++.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+   ++.++|.+.|+++||++.++
T Consensus        80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  148 (149)
T 2ew9_A           80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA  148 (149)
T ss_dssp             SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred             ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence            4678999 99999999999999999999999999999999999843   57899999999999987654

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=99.10  E-value=6e-10  Score=85.77  Aligned_cols=70  Identities=21%  Similarity=0.375  Sum_probs=63.6

Q ss_pred             eEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEccCCCC
Q 036289           29 QTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPY   98 (149)
Q Consensus        29 ~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~~~~~   98 (149)
                      .+++|.|.|+|.+|+.+|+++|.+++||.++++|+..++++|.+..++++|.++|+++||++.++...+.
T Consensus         6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~   75 (222)
T 1qup_A            6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP   75 (222)
T ss_dssp             EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred             eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCc
Confidence            3456778899999999999999999999999999999999999888999999999999999998876544

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=99.04  E-value=4.2e-10  Score=69.92  Aligned_cols=59  Identities=22%  Similarity=0.460  Sum_probs=50.9

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEE
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEI   92 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~   92 (149)
                      +..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|.....    .+.|+++||.+.+
T Consensus         4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~   63 (71)
T 2aj0_A            4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHL   63 (71)
T ss_dssp             EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTC
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCccc
Confidence            567999 9999999999999999999999999999999999986654    4467788886543

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=99.02  E-value=1.5e-09  Score=81.16  Aligned_cols=67  Identities=16%  Similarity=0.328  Sum_probs=59.9

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEccC
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIWPY   95 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~~~   95 (149)
                      .++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..   .++.++|.+.|+++||.+.++..
T Consensus       122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~  192 (202)
T 2rop_A          122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSE  192 (202)
T ss_dssp             EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC--
T ss_pred             eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCC
Confidence            5678999 9999999999999999999999999999999999974   36789999999999999888764

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.98  E-value=2.2e-09  Score=83.92  Aligned_cols=70  Identities=21%  Similarity=0.375  Sum_probs=63.1

Q ss_pred             eEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEccCCCC
Q 036289           29 QTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWPYVPY   98 (149)
Q Consensus        29 ~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~~~~~   98 (149)
                      .+++|.|.|+|.+|+.+|+++|.+++||.++++|+..++++|.+..++++|.++|+++||++.++...+.
T Consensus         7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~   76 (249)
T 1jk9_B            7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP   76 (249)
T ss_dssp             EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESST
T ss_pred             eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCcc
Confidence            3456777899999999999999999999999999999999999888999999999999999988765543

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.95  E-value=3.1e-09  Score=74.70  Aligned_cols=67  Identities=18%  Similarity=0.269  Sum_probs=59.9

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEcc
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      |+++.|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|..   ..+.++|.+.|+..||.+.+..
T Consensus         3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~   73 (149)
T 2ew9_A            3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME   73 (149)
T ss_dssp             CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred             cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence            66788999 9999999999999999999999999999999999874   3577899999999999887643

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.69  E-value=9e-08  Score=67.40  Aligned_cols=63  Identities=17%  Similarity=0.405  Sum_probs=55.4

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCce
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRA   90 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a   90 (149)
                      +.+..|.| ||+|.+|+.+|++.|.+++||..+.+++..+++.|..   ..+...+.+.++..||.+
T Consensus         5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   71 (151)
T 1p6t_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (151)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence            34567999 9999999999999999999999999999999998863   357888999999999865

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.64  E-value=7e-08  Score=71.90  Aligned_cols=65  Identities=17%  Similarity=0.406  Sum_probs=55.7

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhc---CCceE
Q 036289           27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAKST---GKRAE   91 (149)
Q Consensus        27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~---~~~~~I~~~I~~~---G~~a~   91 (149)
                      .+.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|...   ++.++|.+.|+.+   ||.+.
T Consensus        18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~   89 (202)
T 2rop_A           18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVS   89 (202)
T ss_dssp             --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEE
T ss_pred             ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEE
Confidence            356778999 99999999999999999999999999999999999743   6788899999988   36553

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.60  E-value=1.1e-07  Score=83.85  Aligned_cols=64  Identities=20%  Similarity=0.293  Sum_probs=58.0

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEc
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~   93 (149)
                      +++|.| ||+|.+|+.+|+++|.+++||.++++|+.+++++|..   ..+.++|.++|++.||++...
T Consensus         3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~   70 (723)
T 3j09_A            3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDE   70 (723)
T ss_dssp             CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSC
T ss_pred             eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccccc
Confidence            357999 9999999999999999999999999999999999973   368999999999999987543

>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1

Probab=89.98  E-value=1.4  Score=29.30  Aligned_cols=67  Identities=15%  Similarity=0.215  Sum_probs=47.1

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEe-----cCCCEE--EEEec-CCHHHHHHHHHhcCCceEEcc
Q 036289           27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEIN-----RKQQKV--SVTGY-VEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vd-----l~~~~v--~V~g~-~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      ..+++.|.| ..+-+.- -.+-+.|.+++||..|++.     ..+..+  +|+|. ++.++|.++|++.|-.+.-..
T Consensus         5 ~iRRlVLDVlKPh~P~i-vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHSID   80 (100)
T 3bpd_A            5 GLRRLVLDVLKPHEPKT-IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSVD   80 (100)
T ss_dssp             SEEEEEEEEEEESCSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEEE
T ss_pred             cceEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence            356777777 5444443 4566779999999988754     334433  44565 999999999999997665443

>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1

Probab=88.36  E-value=2.6  Score=27.84  Aligned_cols=66  Identities=17%  Similarity=0.278  Sum_probs=46.6

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEe-----cCCCEE--EEEec-CCHHHHHHHHHhcCCceEEc
Q 036289           27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEIN-----RKQQKV--SVTGY-VEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vd-----l~~~~v--~V~g~-~~~~~I~~~I~~~G~~a~~~   93 (149)
                      ..+++.|.| ..+-+.- -.+-+.|.+++||..|++.     ..+..+  +|+|. ++.++|.++|++.|-.+.-.
T Consensus         5 ~irRlVLDVlKPh~p~i-~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSI   79 (97)
T 2raq_A            5 GLIRIVLDILKPHEPII-PEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSV   79 (97)
T ss_dssp             SEEEEEEEEECCSCSCH-HHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEE
T ss_pred             CceEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence            366777888 5554444 4566678889998887753     444544  44565 99999999999999766543

>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}

Probab=87.70  E-value=3  Score=27.47  Aligned_cols=65  Identities=17%  Similarity=0.279  Sum_probs=45.1

Q ss_pred             ceEEEEEE--cCcChhHHHHHHHHHhCCCCeeEEEEe-----cCCCEE--EEEec-CCHHHHHHHHHhcCCceEEc
Q 036289           28 LQTVDLKV--RMDCDGCELKVKNAVSSLSGVKSVEIN-----RKQQKV--SVTGY-VEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        28 ~~~v~l~V--gm~C~~C~~kV~k~L~~~~GV~~v~vd-----l~~~~v--~V~g~-~~~~~I~~~I~~~G~~a~~~   93 (149)
                      .+++.|.|  .++-+.- -.+-+.|.+++||..|++.     ..+..+  +|+|. ++.++|.++|++.|-.+.-.
T Consensus         4 irRlVLDVlKP~h~P~i-vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSI   78 (96)
T 2x3d_A            4 IRRLVLDVLKPIRGTSI-VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSI   78 (96)
T ss_dssp             EEEEEEEEEEESSSSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEE
T ss_pred             eEEEEEEcccCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence            45666766  3355544 3566778999999988754     333433  45565 99999999999999766543

>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A

Probab=83.34  E-value=5.3  Score=25.00  Aligned_cols=55  Identities=7%  Similarity=0.068  Sum_probs=40.8

Q ss_pred             EEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceEEcc
Q 036289           31 VDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT--GYVEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        31 v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~--g~~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      .++.+ |+.|+.-.-+++++|.+++.         .+.+.|.  .......|.+.+++.|+.+....
T Consensus        11 ~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~~   68 (82)
T 3lvj_C           11 HTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAKE   68 (82)
T ss_dssp             EEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred             EEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence            56888 99999999999999998732         1233333  23456788889999999876653

>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3

Probab=81.17  E-value=6  Score=25.84  Aligned_cols=55  Identities=15%  Similarity=0.138  Sum_probs=41.4

Q ss_pred             EEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEEcc
Q 036289           31 VDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG--YVEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        31 v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g--~~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      .++.+ |+.|+.-.-+++++|.+++.         .+.+.|..  ......|.+.++..|+.+....
T Consensus        27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~e   84 (98)
T 1jdq_A           27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVLEIE   84 (98)
T ss_dssp             EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEEEEE
T ss_pred             EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence            56888 99999999999999998732         22344432  2446888999999999886554

>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*

Probab=81.17  E-value=2.5  Score=27.68  Aligned_cols=37  Identities=27%  Similarity=0.503  Sum_probs=27.6

Q ss_pred             EEEEEEcCcChhH------HHHHHHHHhCCCCeeEEEEecCCC
Q 036289           30 TVDLKVRMDCDGC------ELKVKNAVSSLSGVKSVEINRKQQ   66 (149)
Q Consensus        30 ~v~l~Vgm~C~~C------~~kV~k~L~~~~GV~~v~vdl~~~   66 (149)
                      ++.+.+.+.+++|      ...|+.+|..++||.++++++...
T Consensus        42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~~~   84 (103)
T 3cq1_A           42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTFE   84 (103)
T ss_dssp             EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECCS
T ss_pred             EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEecC
Confidence            4556666677777      567899999999999988875443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	149
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	1e-13
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	3e-13
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	1e-11
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	7e-11
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	1e-10
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	3e-09
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	7e-09
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	1e-08
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	1e-08
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	6e-08
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	9e-08
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	9e-08
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	5e-07
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	3e-06

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.2 bits (146), Expect = 1e-13
 Identities = 15/61 (24%), Positives = 31/61 (50%)

Query: 33 LKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEI 92
            + M C+ C   +K  + ++ G+ S+  + +QQ +SV   V  + ++   ++ GK A I
Sbjct: 10 YAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAII 69

Query: 93 W 93
           
Sbjct: 70 R 70

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.6 bits (142), Expect = 3e-13
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 27 QLQTVDLKVRMDCDGCELKVKNAVSSL-SGVKSVEINRKQQKVSVTGYVEANKVLKKAKS 85
          +++     V M C GC   V   ++ L   V  ++I+ ++Q V V   +  + +L+K K 
Sbjct: 2  EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKK 61

Query: 86 TGKRA 90
          TGK  
Sbjct: 62 TGKEV 66

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 54.8 bits (132), Expect = 1e-11
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 33 LKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEI 92
            V M C GC   V   ++ L G    +I+   +KV +      + +L   K TGK    
Sbjct: 5  FSVDMTCGGCAEAVSRVLNKLGG-VKYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSY 63

Query: 93 W 93
           
Sbjct: 64 L 64

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 52.8 bits (127), Expect = 7e-11
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 29 QTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEANKVLKKAK 84
          QTV L V  M C  C + VK A+S + GV  V++  + ++  VT         K+ K   
Sbjct: 3  QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA 62

Query: 85 STGKRAEI 92
            G  + +
Sbjct: 63 DAGYPSSV 70

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 51.9 bits (124), Expect = 1e-10
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 30 TVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGK 88
          T+ L V  + C+ C   V  AV +     +V+++   +KV++T  +   ++     S G 
Sbjct: 2  TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGH 61

Query: 89 RAE 91
            E
Sbjct: 62 EVE 64

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.6 bits (116), Expect = 3e-09
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 29 QTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT--GYVEANKVLKKAKS 85
          + V L V  M C  C   +   + +L GV   +I+    +  VT    V A+ + +  + 
Sbjct: 2  REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIED 61

Query: 86 TGKRAEIW 93
           G   EI 
Sbjct: 62 CGFDCEIL 69

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (113), Expect = 7e-09
 Identities = 10/69 (14%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 28 LQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEANKVLKKA 83
          + +V + V  M C+ C   ++  +  ++GV  ++++ +++  ++           + +  
Sbjct: 7  VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAI 66

Query: 84 KSTGKRAEI 92
             G  A I
Sbjct: 67 DDMGFDAVI 75

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 47.1 bits (112), Expect = 1e-08
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 4/65 (6%)

Query: 32 DLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEANKVLKKAKSTG 87
          +  V+ M C+ C  +++ AV  +SGVK V++  K++K  V      V+A ++ +     G
Sbjct: 3  EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELG 62

Query: 88 KRAEI 92
           +AE+
Sbjct: 63 YQAEV 67

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 46.8 bits (111), Expect = 1e-08
 Identities = 9/68 (13%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 29 QTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEANKVLKKAK 84
          +  +  +  M C  C  +++  ++ + GV +  +N   + V+V         + + +   
Sbjct: 2  EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 61

Query: 85 STGKRAEI 92
            G + ++
Sbjct: 62 KLGYKLKL 69

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 45.2 bits (107), Expect = 6e-08
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 29 QTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKA-KST 86
               KV  MDC  C  KV+NAV  L+GV  V++    +K+ V    +    ++ A +  
Sbjct: 3  TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKA 62

Query: 87 GKRAE 91
          G    
Sbjct: 63 GYSLR 67

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (105), Expect = 9e-08
 Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 4/68 (5%)

Query: 29 QTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEANKVLKKAK 84
          Q   + +  M C+ C   ++  +S   GVKS+ ++      +V           +    +
Sbjct: 3  QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62

Query: 85 STGKRAEI 92
            G  A +
Sbjct: 63 DMGFDATL 70

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 44.4 bits (105), Expect = 9e-08
 Identities = 11/65 (16%), Positives = 27/65 (41%), Gaps = 4/65 (6%)

Query: 27 QLQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEANKVLKK 82
          + + + ++V  M C  C  +++  +  + GV    +N   + V+V           + +K
Sbjct: 4  EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEK 63

Query: 83 AKSTG 87
           +  G
Sbjct: 64 IEKLG 68

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 42.5 bits (100), Expect = 5e-07
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 4/64 (6%)

Query: 28 LQTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEANKVLKKA 83
          ++   L+V  M C  C   V+ +V  L GV +V +N +  KV V+     V    +    
Sbjct: 1  MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAI 60

Query: 84 KSTG 87
          +  G
Sbjct: 61 EDQG 64

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (95), Expect = 3e-06
 Identities = 12/68 (17%), Positives = 32/68 (47%), Gaps = 4/68 (5%)

Query: 29 QTVDLKVR-MDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY---VEANKVLKKAK 84
            + +KV  M C  C   ++  +  L GV+ ++++   Q+ ++      +   ++ K+ +
Sbjct: 9  VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE 68

Query: 85 STGKRAEI 92
          + G  A +
Sbjct: 69 AMGFPAFV 76

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	149
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.7
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.69
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.68
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.61
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.61
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.6
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.59
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.59
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.58
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.57
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.54
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.54
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.53
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.51
d3bpda1	91	Uncharacterized protein AF1549 {Archaeoglobus fulg	89.47
d2raqa1	93	Uncharacterized protein MTH889 {Methanobacterium t	89.15
d1jdqa_	98	Hypothetical protein TM0983 {Thermotoga maritima [	82.54
d1dcja_	81	SirA {Escherichia coli [TaxId: 562]}	81.72

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.70  E-value=4.1e-17  Score=102.13  Aligned_cols=64  Identities=27%  Similarity=0.467  Sum_probs=61.1

Q ss_pred             EEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEcc
Q 036289           30 TVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        30 ~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      +++|+|+|+|.+|+.+|+++|++++|+ ++++|+.+++++|.+++++++|+++|+++||++++++
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a~lig   65 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG   65 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeEEEee
Confidence            568999999999999999999999998 6999999999999999999999999999999999875

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=7.5e-17  Score=102.50  Aligned_cols=66  Identities=23%  Similarity=0.444  Sum_probs=62.9

Q ss_pred             eEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEcc
Q 036289           29 QTVDLKVRMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        29 ~~v~l~Vgm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      .+++|.|+|+|++|+++|+++|.+++||.++.+|+.+++++|++.+++++|+++|+++||+|.+++
T Consensus         6 ~~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~A~l~g   71 (72)
T d1qupa2           6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRG   71 (72)
T ss_dssp             EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEEC
T ss_pred             EEEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCCEEEec
Confidence            356799999999999999999999999999999999999999999999999999999999999876

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.68  E-value=2.3e-16  Score=100.25  Aligned_cols=65  Identities=28%  Similarity=0.491  Sum_probs=62.0

Q ss_pred             cceEEEEEEcCcChhHHHHHHHHHhCC-CCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceE
Q 036289           27 QLQTVDLKVRMDCDGCELKVKNAVSSL-SGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAE   91 (149)
Q Consensus        27 ~~~~v~l~Vgm~C~~C~~kV~k~L~~~-~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~   91 (149)
                      ++++++|+|+|+|.+|+.+|+++|.++ +||.++++|+.+++++|.+.+++++|+++|+++||++.
T Consensus         2 ~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~   67 (72)
T d1cc8a_           2 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVR   67 (72)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEE
T ss_pred             CcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCCccC
Confidence            478899999999999999999999999 59999999999999999999999999999999999986

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.61  E-value=9.6e-16  Score=97.15  Aligned_cols=66  Identities=26%  Similarity=0.410  Sum_probs=61.5

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceEEcc
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT--GYVEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~--g~~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      +++.|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.  ..+++++|.++|+++||+++++.
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~~   70 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCeEEcc
Confidence            4688999 999999999999999999999999999999999998  45889999999999999998865

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.61  E-value=2.6e-15  Score=95.13  Aligned_cols=66  Identities=30%  Similarity=0.502  Sum_probs=61.3

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE---ecCCHHHHHHHHHhcCCceEEc
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~---g~~~~~~I~~~I~~~G~~a~~~   93 (149)
                      -+++.|.| ||+|.+|+.+|+++|.+++||.++++|+..+++.|+   +.+++++|.+.|+.+||+++++
T Consensus         2 tqt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v~   71 (72)
T d1osda_           2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEeC
Confidence            36789999 999999999999999999999999999999999998   3478999999999999999875

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.60  E-value=3.9e-16  Score=96.90  Aligned_cols=62  Identities=24%  Similarity=0.461  Sum_probs=59.2

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceE
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGYVEANKVLKKAKSTGKRAE   91 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~~~~~~I~~~I~~~G~~a~   91 (149)
                      +++|.| ||+|.+|+.+|+++|.+++||.++++|+.+++++|++.+++++|.++|+++||+++
T Consensus         2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~ve   64 (64)
T d1sb6a_           2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEVE   64 (64)
T ss_dssp             EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHHHCCCCC
T ss_pred             eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHHcCCCCC
Confidence            468999 99999999999999999999999999999999999999999999999999999874

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.59  E-value=4.3e-15  Score=93.29  Aligned_cols=63  Identities=27%  Similarity=0.450  Sum_probs=59.0

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCce
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRA   90 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a   90 (149)
                      |++.+|.| ||+|.+|+.+|+++|++++||.++++|+..++++|..   .++.++|.+.|+++||++
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~   67 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            56788999 9999999999999999999999999999999999983   378999999999999986

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.59  E-value=3.1e-15  Score=93.73  Aligned_cols=62  Identities=31%  Similarity=0.543  Sum_probs=57.8

Q ss_pred             EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEc
Q 036289           32 DLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        32 ~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~   93 (149)
                      +|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|+.   .+++++|.++|+++||++++.
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEEC
Confidence            5899 9999999999999999999999999999999999983   378999999999999999863

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=8e-15  Score=94.37  Aligned_cols=70  Identities=14%  Similarity=0.351  Sum_probs=64.5

Q ss_pred             CcceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEccC
Q 036289           26 KQLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIWPY   95 (149)
Q Consensus        26 ~~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~~~   95 (149)
                      ..+.++.|.| ||+|.+|+.+|+++|++++||.++++|+.+++++|..   .+++++|.++|+++||++.+..+
T Consensus         5 ~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~~~   78 (79)
T d1kvja_           5 MGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP   78 (79)
T ss_dssp             TTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSC
T ss_pred             CCceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeCCC
Confidence            4578899999 9999999999999999999999999999999999983   37999999999999999988653

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=5.8e-15  Score=93.37  Aligned_cols=65  Identities=18%  Similarity=0.333  Sum_probs=59.9

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEc
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~   93 (149)
                      ++..|+| ||+|.+|+.+|+++|.+++||.++++|+..++++|..   .+++++|.++|+++||++.+.
T Consensus         3 ~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l~   71 (72)
T d2aw0a_           3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred             EEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEeC
Confidence            4678999 9999999999999999999999999999999999983   378999999999999998764

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.3e-14  Score=94.43  Aligned_cols=70  Identities=17%  Similarity=0.371  Sum_probs=63.9

Q ss_pred             CcceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE---ecCCHHHHHHHHHhcCCceEEccC
Q 036289           26 KQLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEANKVLKKAKSTGKRAEIWPY   95 (149)
Q Consensus        26 ~~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~---g~~~~~~I~~~I~~~G~~a~~~~~   95 (149)
                      ....++.|+| ||+|.+|+.+|+++|.+++||.++++|+.+++++|.   ..++.++|.++|+++||++.+...
T Consensus         6 ~~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~~   79 (84)
T d1q8la_           6 AGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ   79 (84)
T ss_dssp             SSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred             CCCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEcCC
Confidence            4566789999 999999999999999999999999999999999998   347899999999999999988764

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.54  E-value=1.6e-14  Score=91.27  Aligned_cols=63  Identities=17%  Similarity=0.429  Sum_probs=58.6

Q ss_pred             ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE---ecCCHHHHHHHHHhcCCce
Q 036289           28 LQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT---GYVEANKVLKKAKSTGKRA   90 (149)
Q Consensus        28 ~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~---g~~~~~~I~~~I~~~G~~a   90 (149)
                      ..+++|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|.   +.++.++|.++|+++||++
T Consensus         5 ~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (72)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             ceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            45789999 999999999999999999999999999999999997   4478999999999999976

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.53  E-value=1.9e-14  Score=92.59  Aligned_cols=67  Identities=13%  Similarity=0.328  Sum_probs=62.0

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEccC
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTG---YVEANKVLKKAKSTGKRAEIWPY   95 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g---~~~~~~I~~~I~~~G~~a~~~~~   95 (149)
                      .+++|.| ||+|.+|+.+|+++|..++||.++++|+..++++|+.   .++.++|.++|+++||++.+.+.
T Consensus         2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   72 (79)
T d1p6ta2           2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE   72 (79)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEECCc
Confidence            4678999 9999999999999999999999999999999999983   37899999999999999998764

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.51  E-value=3.2e-14  Score=90.16  Aligned_cols=65  Identities=29%  Similarity=0.349  Sum_probs=58.7

Q ss_pred             eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec-CCHHHHHHHHHhcCCceEEc
Q 036289           29 QTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVTGY-VEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        29 ~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~g~-~~~~~I~~~I~~~G~~a~~~   93 (149)
                      ++++|.| ||+|++|+.+|+++|.+++||.++++|+.+++++|..+ ...++|.+.|+++||.+...
T Consensus         3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~GY~v~~~   69 (73)
T d1mwza_           3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE   69 (73)
T ss_dssp             CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCCCCBC
T ss_pred             CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHcCCcccCC
Confidence            4578999 99999999999999999999999999999999999854 45789999999999987654

>d3bpda1 d.58.61.1 (A:1-91) Uncharacterized protein AF1549 {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein AF1549
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.47  E-value=1.2  Score=27.51  Aligned_cols=66  Identities=15%  Similarity=0.212  Sum_probs=47.0

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEe-----cCCCEE--EEEec-CCHHHHHHHHHhcCCceEEc
Q 036289           27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEIN-----RKQQKV--SVTGY-VEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vd-----l~~~~v--~V~g~-~~~~~I~~~I~~~G~~a~~~   93 (149)
                      ..+++.|.| .-+-+.-.. +-+.|.+++||..+++.     ..+..+  +|+|. ++.++|.+.|++.|-...-.
T Consensus         3 ~irRlVLDVlKPh~p~~~~-~A~~l~~~~gV~~VnitV~EiD~~t~~i~ItiEG~~idyd~i~~~IE~~Gg~IHSI   77 (91)
T d3bpda1           3 GLRRLVLDVLKPHEPKTIV-FALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSV   77 (91)
T ss_dssp             SEEEEEEEEEEESCSCHHH-HHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEE
T ss_pred             ceeEEEEEeecCCCCCHHH-HHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCCeEEEE
Confidence            356777888 545555444 77789999999988754     333433  44565 99999999999999766543

>d2raqa1 d.58.61.1 (A:3-95) Uncharacterized protein MTH889 {Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein MTH889
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.15  E-value=1.5  Score=27.13  Aligned_cols=66  Identities=17%  Similarity=0.295  Sum_probs=47.6

Q ss_pred             cceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEE-----ecCCCEE--EEEec-CCHHHHHHHHHhcCCceEEc
Q 036289           27 QLQTVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEI-----NRKQQKV--SVTGY-VEANKVLKKAKSTGKRAEIW   93 (149)
Q Consensus        27 ~~~~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~v-----dl~~~~v--~V~g~-~~~~~I~~~I~~~G~~a~~~   93 (149)
                      ..+++.|.| .-+-+ -.-.+-+.|.+++||..+++     |.....+  +|+|. ++.++|.+.|++.|-.+.-.
T Consensus         3 ~iRRlVLDVlKPh~P-~i~e~A~~l~~~~gV~~VnitV~EiD~et~~i~itiEG~~idyd~i~~~IE~~Gg~IHSI   77 (93)
T d2raqa1           3 GLIRIVLDILKPHEP-IIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSV   77 (93)
T ss_dssp             SEEEEEEEEECCSCS-CHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEE
T ss_pred             ceEEEEEEeecCCCC-CHHHHHHHHhccCCcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCCeEEEE
Confidence            356778888 55555 45567778999999988775     3444444  44565 99999999999999876544

>d1jdqa_ d.68.3.3 (A:) Hypothetical protein TM0983 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: SirA-like
family: SirA-like
domain: Hypothetical protein TM0983
species: Thermotoga maritima [TaxId: 2336]

Probab=82.54  E-value=2  Score=26.55  Aligned_cols=53  Identities=17%  Similarity=0.194  Sum_probs=40.4

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceE
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT--GYVEANKVLKKAKSTGKRAE   91 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~--g~~~~~~I~~~I~~~G~~a~   91 (149)
                      +.++.+ |..|+....+++++|.+++.         .+.+.|.  .....+.|...+++.|+.+.
T Consensus        26 ~~~LD~rG~~CP~Pll~~kkal~~l~~---------Ge~L~V~~dd~~a~~dI~~~~~~~g~~i~   81 (98)
T d1jdqa_          26 TKTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVL   81 (98)
T ss_dssp             CEEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEE
T ss_pred             CeeEECCCCcCCHHHHHHHHHHHcCCC---------CCEEEEEeCCcchHHHHHHHHHHcCCEEE
Confidence            346888 99999999999999998743         2234443  22456789999999999874

>d1dcja_ d.68.3.3 (A:) SirA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: SirA-like
family: SirA-like
domain: SirA
species: Escherichia coli [TaxId: 562]

Probab=81.72  E-value=1.4  Score=26.16  Aligned_cols=56  Identities=7%  Similarity=0.067  Sum_probs=42.0

Q ss_pred             EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceEEcc
Q 036289           30 TVDLKV-RMDCDGCELKVKNAVSSLSGVKSVEINRKQQKVSVT--GYVEANKVLKKAKSTGKRAEIWP   94 (149)
Q Consensus        30 ~v~l~V-gm~C~~C~~kV~k~L~~~~GV~~v~vdl~~~~v~V~--g~~~~~~I~~~I~~~G~~a~~~~   94 (149)
                      ..++.+ |+.|+....+++++|.+++.         .+.+.|.  .......|...++..|+++..+.
T Consensus         9 ~~~lD~~G~~CP~P~l~~k~al~~~~~---------G~~l~v~~dd~~a~~di~~~~~~~g~~~~~~~   67 (81)
T d1dcja_           9 DHTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAKE   67 (81)
T ss_dssp             SEEECCTTCCTTHHHHHHHHHHHHCCT---------TCCEEEEECSTTHHHHHHHHHHHTTCEEEEEE
T ss_pred             CeEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEeCCCcHHHHHHHHHHHcCCEEEEEE
Confidence            456888 99999999999999998743         2234443  33567788889999999886554