Citrus Sinensis ID: 036296
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 433 | ||||||
| 356549665 | 435 | PREDICTED: epidermis-specific secreted g | 0.956 | 0.951 | 0.644 | 1e-160 | |
| 383932356 | 440 | epidermis-specific secreted glycoprotein | 0.923 | 0.909 | 0.641 | 1e-158 | |
| 359493788 | 429 | PREDICTED: epidermis-specific secreted g | 0.951 | 0.960 | 0.629 | 1e-154 | |
| 147834750 | 444 | hypothetical protein VITISV_035367 [Viti | 0.949 | 0.925 | 0.623 | 1e-154 | |
| 359493598 | 444 | PREDICTED: epidermis-specific secreted g | 0.949 | 0.925 | 0.623 | 1e-154 | |
| 388514905 | 436 | unknown [Medicago truncatula] | 0.951 | 0.944 | 0.616 | 1e-153 | |
| 449483158 | 440 | PREDICTED: epidermis-specific secreted g | 0.923 | 0.909 | 0.638 | 1e-153 | |
| 449438929 | 440 | PREDICTED: epidermis-specific secreted g | 0.923 | 0.909 | 0.636 | 1e-152 | |
| 224114792 | 428 | predicted protein [Populus trichocarpa] | 0.944 | 0.955 | 0.634 | 1e-151 | |
| 224114796 | 428 | predicted protein [Populus trichocarpa] | 0.944 | 0.955 | 0.634 | 1e-151 |
| >gi|356549665|ref|XP_003543212.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 276/428 (64%), Positives = 330/428 (77%), Gaps = 14/428 (3%)
Query: 6 AIITLFALLPLVFSIANAQVPPSETFQFVNEGDFGDFIVEYGGDYRMLGIFNAPFQLGFY 65
+++TLF IA+A VP +ETF+F N G+ G +IVEYG DYRM+ IFN+PFQ+GFY
Sbjct: 10 SLLTLFFFSSFTI-IAHAIVPQNETFKFENSGELGPYIVEYGADYRMISIFNSPFQVGFY 68
Query: 66 NTTPNAYTLALRWGLTRQEPFFRWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQ 125
NTTPNA+TLALR GL R E FRWVWEANR PV ENATFSLGTDGNLVLA+ADG + WQ
Sbjct: 69 NTTPNAFTLALRVGLQRSEQLFRWVWEANRANPVGENATFSLGTDGNLVLADADGRIAWQ 128
Query: 126 TNTANKGVVGFKLLSNGNMVLHDSKGNFIWQSFDYPTDTLLVGQSLRAGGVAKLVSRASE 185
TNTANKGVV F+LLSNGNMVL D++G F+WQSFD+PTDTLLVGQ LRA G +KLVSR SE
Sbjct: 129 TNTANKGVVAFRLLSNGNMVLLDAQGGFVWQSFDHPTDTLLVGQYLRAKGPSKLVSRLSE 188
Query: 186 KENIDGPYSFLMEPKRLAMYYKSSNSPRPVLYFTSSEWFTVREGSLENITFTSEPET-EE 244
KEN+DGPYS ++EPK LA+YYKS NSP+P+LY+ SS+WFT++ GSLEN+TFTS+PET E
Sbjct: 189 KENVDGPYSLVLEPKGLALYYKSKNSPKPILYWFSSDWFTIQRGSLENVTFTSDPETFEL 248
Query: 245 AFAYHLSLDSSVAGVRLARPRYNSTISLLRLEMDGNLRIYTYDERVDWGPTEKTFTLFDR 304
F YH++ SS L RP NSTI+ LRL +DGN+R YTY V G + T+TLFDR
Sbjct: 249 GFDYHVANSSSGGNRILGRPVNNSTITYLRLGIDGNIRFYTYFLDVRDGVWQVTYTLFDR 308
Query: 305 DSDWEISECQLPERCGKFGLCDDNQCVACPMGKGLLGWTKECEARKL----------LLV 354
DSD SECQLPERCGKFGLC+DNQCVACP+ GLLGW+ C A+ + +
Sbjct: 309 DSD--ESECQLPERCGKFGLCEDNQCVACPLENGLLGWSNNCTAKAVTSCKASDFHYYKI 366
Query: 355 EGVNHFMSKYTRGATTKVEDCGKKCTSDCKCLGYFYHQETSKCWIAYDLKTLTKFPNSTH 414
EGV H+MSKYT G CG KCT DCKC+GYFYH+E S+CW+AYDL+TLT+ NS+H
Sbjct: 367 EGVEHYMSKYTTGDRVSESTCGNKCTKDCKCVGYFYHKENSRCWVAYDLQTLTRGANSSH 426
Query: 415 VGFIKVPN 422
VG+IKVPN
Sbjct: 427 VGYIKVPN 434
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|383932356|gb|AFH57275.1| epidermis-specific secreted glycoprotein EP1-like protein [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
| >gi|359493788|ref|XP_002285446.2| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147834750|emb|CAN75015.1| hypothetical protein VITISV_035367 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359493598|ref|XP_002283208.2| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|388514905|gb|AFK45514.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449483158|ref|XP_004156509.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449438929|ref|XP_004137240.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224114792|ref|XP_002316858.1| predicted protein [Populus trichocarpa] gi|222859923|gb|EEE97470.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224114796|ref|XP_002316859.1| predicted protein [Populus trichocarpa] gi|222859924|gb|EEE97471.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 433 | ||||||
| TAIR|locus:2037568 | 443 | AT1G78860 [Arabidopsis thalian | 0.960 | 0.939 | 0.491 | 1.5e-108 | |
| TAIR|locus:2037508 | 441 | AT1G78850 [Arabidopsis thalian | 0.951 | 0.934 | 0.489 | 9.2e-107 | |
| TAIR|locus:4010713447 | 423 | AT1G16905 [Arabidopsis thalian | 0.928 | 0.950 | 0.450 | 2.3e-94 | |
| UNIPROTKB|Q39688 | 389 | EP1 "Epidermis-specific secret | 0.681 | 0.758 | 0.580 | 4.6e-89 | |
| TAIR|locus:2037548 | 455 | AT1G78830 [Arabidopsis thalian | 0.794 | 0.756 | 0.448 | 1.7e-73 | |
| TAIR|locus:2037563 | 455 | AT1G78820 [Arabidopsis thalian | 0.780 | 0.742 | 0.423 | 9.2e-68 | |
| TAIR|locus:2088619 | 439 | AT3G12000 [Arabidopsis thalian | 0.709 | 0.699 | 0.288 | 1.1e-20 | |
| TAIR|locus:2059103 | 828 | AT2G19130 [Arabidopsis thalian | 0.817 | 0.427 | 0.246 | 4.2e-18 | |
| TAIR|locus:2141181 | 850 | RK3 "receptor kinase 3" [Arabi | 0.695 | 0.354 | 0.283 | 7.7e-17 | |
| TAIR|locus:2116525 | 821 | SD2-5 "S-domain-2 5" [Arabidop | 0.385 | 0.203 | 0.318 | 9.3e-17 |
| TAIR|locus:2037568 AT1G78860 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 213/433 (49%), Positives = 284/433 (65%)
Query: 5 SAIITLFALLPLVFSIANAQVPPSETFQFVNEGDFGDFI-VEYGGDYRMLGIFNAPFQLG 63
S + LF L + A A+VP + F+ VNEG + D+ +EY D R F+ F+L
Sbjct: 4 STTLALFFTLSIFLVGAQAKVPVDDQFRVVNEGGYTDYSPIEYNPDVRGFVPFSDNFRLC 63
Query: 64 FYNTTPNAYTLALRWGLTRQEPFFRWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVV 123
FYNTT NAYTLALR G QE RWVWEANRG PV+ENAT + G DGNLVLAEADG VV
Sbjct: 64 FYNTTQNAYTLALRIGNRAQESTLRWVWEANRGSPVKENATLTFGEDGNLVLAEADGRVV 123
Query: 124 WQTNTANKGVVGFKLLSNGNMVLHDSKGNFIWQSFDYPTDTLLVGQSLRAGGVAKLVSRA 183
WQTNTANKGVVG K+L NGNMV++DS G F+WQSFD PTDTLLVGQSL+ G KLVSR
Sbjct: 124 WQTNTANKGVVGIKILENGNMVIYDSNGKFVWQSFDSPTDTLLVGQSLKLNGQNKLVSRL 183
Query: 184 SEKENIDGPYSFLMEPKRLAMYYKSSNSPRPVLYFTSSEWFTVREGSLENITFTSEPETE 243
S N +GPYS +ME K+L +YY ++ +P+P+ Y+ E+FT + L+++TF + + +
Sbjct: 184 SPSVNANGPYSLVMEAKKLVLYYTTNKTPKPIGYY-EYEFFT-KIAQLQSMTFQAVEDAD 241
Query: 244 EAFAYHLS-LDS-SVAGVR--LARPRYNSTISLLRLEMDGNLRIYTYDERVDWGPTEKTF 299
+ H+ +DS S V L+RP++N+T+S LRLE DGN+R+++Y + T+
Sbjct: 242 TTWGLHMEGVDSGSQFNVSTFLSRPKHNATLSFLRLESDGNIRVWSYSTLATSTAWDVTY 301
Query: 300 TLFDRDSDWEISECQLPERCGKFGLCDDNQCVACPMGKGLLGWTKECEARKL-------- 351
T F D+ EC++PE C FGLC QC ACP GLLGW + C+ L
Sbjct: 302 TAFTNDNTDGNDECRIPEHCLGFGLCKKGQCNACPSDIGLLGWDETCKIPSLASCDPKTF 361
Query: 352 --LLVEGVNHFMSKYTRGATTKVEDCGKKCTSDCKCLGYFYHQETSKCWIAYDLKTLTKF 409
+EG + FM+KY G+TT CG KCT DCKCLG+FY++++S+CW+ Y+LKTLTK
Sbjct: 362 HYFKIEGADSFMTKYNGGSTTTESACGDKCTRDCKCLGFFYNRKSSRCWLGYELKTLTKT 421
Query: 410 PNSTHVGFIKVPN 422
+++ V ++K PN
Sbjct: 422 GDTSLVAYVKAPN 434
|
|
| TAIR|locus:2037508 AT1G78850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:4010713447 AT1G16905 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q39688 EP1 "Epidermis-specific secreted glycoprotein EP1" [Daucus carota (taxid:4039)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037548 AT1G78830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037563 AT1G78820 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2088619 AT3G12000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh4_pg.C_LG_XI000889 | hypothetical protein (428 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 433 | |||
| smart00108 | 114 | smart00108, B_lectin, Bulb-type mannose-specific l | 1e-32 | |
| cd00028 | 116 | cd00028, B_lectin, Bulb-type mannose-specific lect | 2e-32 | |
| pfam01453 | 109 | pfam01453, B_lectin, D-mannose binding lectin | 2e-31 | |
| cd01098 | 84 | cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain | 8e-10 |
| >gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 1e-32
Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 45 EYGGDYRMLGIFNAPFQLGFYNTTPNAYTLALRWGLTRQEPFFRWVWEANRGKPVRENAT 104
+ L N+ F+LGF+ + + VW ANR PV ++ T
Sbjct: 2 NTLSSGQTLVSGNSLFELGFFTLIMQNDYN----LILYKSSSRTVVWVANRDNPVSDSCT 57
Query: 105 FSLGTDGNLVLAEADGTVVWQTNTA-NKGVVGFKLLSNGNMVLHDSKGNFIWQSFDY 160
+L +DGNLVL + DG VVW +NT G LL +GN+V++DS GNF+WQSFDY
Sbjct: 58 LTLQSDGNLVLYDGDGRVVWSSNTTGANGNYVLVLLDDGNLVIYDSDGNFLWQSFDY 114
|
Length = 114 |
| >gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
| >gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin | Back alignment and domain information |
|---|
| >gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 433 | |||
| PF01453 | 114 | B_lectin: D-mannose binding lectin; InterPro: IPR0 | 99.96 | |
| cd00028 | 116 | B_lectin Bulb-type mannose-specific lectin. The do | 99.93 | |
| smart00108 | 114 | B_lectin Bulb-type mannose-specific lectin. | 99.92 | |
| PF00954 | 110 | S_locus_glycop: S-locus glycoprotein family; Inter | 99.85 | |
| cd01098 | 84 | PAN_AP_plant Plant PAN/APPLE-like domain; present | 99.38 | |
| PF08276 | 66 | PAN_2: PAN-like domain; InterPro: IPR013227 PAN do | 99.32 | |
| cd00129 | 80 | PAN_APPLE PAN/APPLE-like domain; present in N-term | 99.2 | |
| smart00108 | 114 | B_lectin Bulb-type mannose-specific lectin. | 98.65 | |
| cd00028 | 116 | B_lectin Bulb-type mannose-specific lectin. The do | 98.61 | |
| smart00473 | 78 | PAN_AP divergent subfamily of APPLE domains. Apple | 98.36 | |
| PF01453 | 114 | B_lectin: D-mannose binding lectin; InterPro: IPR0 | 98.26 | |
| cd01100 | 73 | APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d | 97.77 | |
| smart00223 | 79 | APPLE APPLE domain. Four-fold repeat in plasma kal | 95.03 | |
| PF14295 | 51 | PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A. | 93.88 | |
| PF00024 | 79 | PAN_1: PAN domain This Prosite entry concerns appl | 92.62 | |
| smart00605 | 94 | CW CW domain. | 89.45 | |
| PF08277 | 71 | PAN_3: PAN-like domain; InterPro: IPR006583 PAN do | 86.35 | |
| cd01099 | 80 | PAN_AP_HGF Subfamily of PAN/APPLE-like domains; pr | 83.59 |
| >PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-30 Score=219.01 Aligned_cols=103 Identities=48% Similarity=0.777 Sum_probs=76.1
Q ss_pred ceEEEEeCCCCCCCC---CcEEEEecCCcEEEEccCCeEEEec-cCCCCc--eeEEEEeeCCCeeeecCCCeeEEeeccC
Q 036296 87 FRWVWEANRGKPVRE---NATFSLGTDGNLVLAEADGTVVWQT-NTANKG--VVGFKLLSNGNMVLHDSKGNFIWQSFDY 160 (433)
Q Consensus 87 ~t~vW~ANr~~pv~~---~~~l~l~~~G~Lvl~~~~~~~vWst-~~~~~~--~~~~~Lld~GNlvl~~~~~~~lWqSFD~ 160 (433)
+||||+|||++|+.. ..+|.|+.||+|+|+|..++++|++ ++.+.+ ...|+|+|+|||||+|..+.+|||||||
T Consensus 2 ~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~~ 81 (114)
T PF01453_consen 2 RTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFDY 81 (114)
T ss_dssp --------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTTS
T ss_pred cccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecCC
Confidence 589999999999943 4899999999999999999999999 666554 6789999999999999999999999999
Q ss_pred CCcccccccceeec----ceeeEEeeCCCCCCC
Q 036296 161 PTDTLLVGQSLRAG----GVAKLVSRASEKENI 189 (433)
Q Consensus 161 PTDTLLPgq~L~~~----g~~~L~S~~S~~dps 189 (433)
||||+||+|+|+.+ ....|+||++.+|||
T Consensus 82 ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps 114 (114)
T PF01453_consen 82 PTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS 114 (114)
T ss_dssp SS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred CccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence 99999999999753 113599999999996
|
Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B .... |
| >cd00028 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
| >smart00108 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
| >PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation | Back alignment and domain information |
|---|
| >cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins | Back alignment and domain information |
|---|
| >PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] | Back alignment and domain information |
|---|
| >cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins | Back alignment and domain information |
|---|
| >smart00108 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
| >cd00028 B_lectin Bulb-type mannose-specific lectin | Back alignment and domain information |
|---|
| >smart00473 PAN_AP divergent subfamily of APPLE domains | Back alignment and domain information |
|---|
| >PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity | Back alignment and domain information |
|---|
| >cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins | Back alignment and domain information |
|---|
| >smart00223 APPLE APPLE domain | Back alignment and domain information |
|---|
| >PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A | Back alignment and domain information |
|---|
| >PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] | Back alignment and domain information |
|---|
| >smart00605 CW CW domain | Back alignment and domain information |
|---|
| >PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] | Back alignment and domain information |
|---|
| >cd01099 PAN_AP_HGF Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 433 | |||
| 1kj1_A | 109 | Lectin I, lecgna 1; BULB lectin, mannose, plant pr | 4e-13 | |
| 1kj1_A | 109 | Lectin I, lecgna 1; BULB lectin, mannose, plant pr | 1e-10 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 1e-11 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 7e-10 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 2e-11 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 5e-09 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 2e-10 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 4e-07 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 2e-10 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 4e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-10 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 3e-09 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 4e-07 | |
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 4e-09 | |
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 2e-07 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 1e-08 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 2e-08 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 1e-08 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 3e-07 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 2e-08 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 9e-07 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 4e-08 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 7e-06 | |
| 3mez_A | 111 | Mannose-specific lectin 3 chain 1; heterotetramer, | 3e-07 |
| >1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 4e-13
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 88 RWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANK-GVVGFKLLSNGNMVL 146
VW +N G ++ L +DGN V+ +A+G +W +++ G L +GN+V+
Sbjct: 38 TSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVI 97
Query: 147 HDSKGNFIWQSFDY 160
+ S IW + Y
Sbjct: 98 YGSD---IWSTGTY 108
|
| >1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 | Back alignment and structure |
|---|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 | Back alignment and structure |
|---|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 | Back alignment and structure |
|---|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 | Back alignment and structure |
|---|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 | Back alignment and structure |
|---|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 | Back alignment and structure |
|---|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 | Back alignment and structure |
|---|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 | Back alignment and structure |
|---|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 | Back alignment and structure |
|---|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 | Back alignment and structure |
|---|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 | Back alignment and structure |
|---|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 | Back alignment and structure |
|---|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 | Back alignment and structure |
|---|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 | Back alignment and structure |
|---|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 | Back alignment and structure |
|---|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 | Back alignment and structure |
|---|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 | Back alignment and structure |
|---|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 | Back alignment and structure |
|---|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 | Back alignment and structure |
|---|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 | Back alignment and structure |
|---|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 433 | |||
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 100.0 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 99.97 | |
| 4h3o_A | 105 | Lectin; cadmium, plant protein; 2.17A {Allium sati | 99.75 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 99.7 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 99.68 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 99.67 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 99.67 | |
| 3a0c_A | 110 | Mannose/sialic acid-binding lectin; beta-prism II, | 99.64 | |
| 1xd5_A | 112 | Gastrodianin-1, antifungal protein GAFP-1; monocot | 99.63 | |
| 1b2p_A | 119 | Protein (lectin); mannose-binding lectin, monocot, | 99.62 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 99.59 | |
| 2dpf_A | 115 | Curculin; sweet taste, taste modifying, plant prot | 99.57 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 99.42 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.4 | |
| 3mez_B | 113 | Mannose-specific lectin 3 chain 2; heterotetramer, | 99.36 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.32 | |
| 3mez_A | 111 | Mannose-specific lectin 3 chain 1; heterotetramer, | 99.28 | |
| 3mez_A | 111 | Mannose-specific lectin 3 chain 1; heterotetramer, | 99.19 | |
| 3dzw_A | 109 | Agglutinin; lectin, mannobiose, mannose-alpha1, 3- | 99.18 | |
| 3r0e_B | 110 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.17 | |
| 3r0e_A | 109 | Lectin; carbohydrate binding, carbohydrate, sugar | 99.1 | |
| 3m7h_A | 276 | Putidacin L1; monocot mannose-binding lectin, bact | 99.1 | |
| 4h3o_A | 105 | Lectin; cadmium, plant protein; 2.17A {Allium sati | 99.05 | |
| 1dlp_A | 236 | Lectin scafet precursor; two-domain lectin, beta p | 98.8 | |
| 2ll3_A | 82 | Micronemal protein 4; cell adhesion; NMR {Toxoplas | 94.41 | |
| 4a5v_A | 161 | MIC4, micronemal protein 4; adhesion; NMR {Toxopla | 85.41 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 83.57 | |
| 3hms_A | 101 | Hepatocyte growth factor; HGF/SF, hormone/growth f | 81.86 |
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=307.10 Aligned_cols=199 Identities=19% Similarity=0.221 Sum_probs=147.3
Q ss_pred eeEEeecCCeEEEEEEeCCCCCeEEEEEEeecCCCCCceEEEEeCCCCCCCC-----CcEEEEecCCcEEE--EccCCeE
Q 036296 50 YRMLGIFNAPFQLGFYNTTPNAYTLALRWGLTRQEPFFRWVWEANRGKPVRE-----NATFSLGTDGNLVL--AEADGTV 122 (433)
Q Consensus 50 ~~~l~s~~g~F~lGF~~~~~~~~~l~Iw~~~~~~~~~~t~vW~ANr~~pv~~-----~~~l~l~~~G~Lvl--~~~~~~~ 122 (433)
+++|+|++|.|+||||. .. +.|| |+ + .+ +||+|||++||.+ .++|+|+.||+||| .|++|.+
T Consensus 26 ~~~l~S~~g~F~lgf~~-~~-~~~l---y~--~---~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G~Lvl~~~~~~~~~ 94 (276)
T 3m7h_A 26 GQYLLSPNQRFKLLLQG-DG-NLVI---QD--N---GA-TVWVANEQQPFSSTIPLRNKKAPLAFYVQYGAFLDDYSRRR 94 (276)
T ss_dssp TCEEECTTSSEEEEECT-TS-CEEE---EE--T---TE-EEEECSTTSTTEEEEECCCTTCCSEEEESSSEEEEEGGGTE
T ss_pred CCEEEcCCCcEEEEEEC-CC-CeEE---EC--C---CC-eEEECCCCCCcCCcccccceEEEEeCCCcEEEEEeCCCCCE
Confidence 57899999999999994 33 4455 54 2 25 9999999999987 67899999999999 7888899
Q ss_pred EEeccCCC------CceeEEEEeeCCCeeeecCCCeeEEeeccCCCcccccccc----eeecceeeEEeeCCCCCCCCcc
Q 036296 123 VWQTNTAN------KGVVGFKLLSNGNMVLHDSKGNFIWQSFDYPTDTLLVGQS----LRAGGVAKLVSRASEKENIDGP 192 (433)
Q Consensus 123 vWst~~~~------~~~~~~~Lld~GNlvl~~~~~~~lWqSFD~PTDTLLPgq~----L~~~g~~~L~S~~S~~dps~G~ 192 (433)
||++++.. ..++.|+|+|+|||||+| +.+|||| ||||||||||+ |..| ++| ++.+||++|.
T Consensus 95 vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~--~~~lWqS--~ptdtlLpg~~~~~~l~~g--~~L---~S~~dps~G~ 165 (276)
T 3m7h_A 95 VWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD--SLALWNG--TPAIPLVPGAIDSLLLAPG--SEL---VQGVVYGAGA 165 (276)
T ss_dssp EEEECCCCCCCTTHHHHEEEEECTTSCEEEEE--EEEEEES--CTTSCCCCSCTTCEEECSS--EEE---CTTCEEEETT
T ss_pred EEEeCCCcccccccCCceEEEEeCCCCEEecC--CceeeCc--ccccccccccccccccccC--ccc---ccCCCCCCce
Confidence 99999865 235679999999999998 7899999 99999999999 5554 457 6688999999
Q ss_pred eEEEecCCc-cceeeccCCCCCCeeEEecCCccccccCCeeeEEEecCCCcccceeeEEEEeecccce-EEEeecCCCeE
Q 036296 193 YSFLMEPKR-LAMYYKSSNSPRPVLYFTSSEWFTVREGSLENITFTSEPETEEAFAYHLSLDSSVAGV-RLARPRYNSTI 270 (433)
Q Consensus 193 ysl~l~~~g-~~~~~~~~~~~~~~~Yw~sg~w~~~~~~~~~~~~f~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 270 (433)
|+|+|+++| +.++ .. . ..+||++++|... . ..+.+.... .|.+. +..+. +.+........
T Consensus 166 fsl~l~~dGnlvLy-~~--~--~~~yW~Sgt~~~~---~-~~l~l~~dG--------nLvl~-d~~~~~vWsS~t~~~~~ 227 (276)
T 3m7h_A 166 SKLVFQGDGNLVAY-GP--N--GAATWNAGTQGKG---A-VRAVFQGDG--------NLVVY-GAGNAVLWHSHTGGHAS 227 (276)
T ss_dssp EEEEECTTSCEEEE-CT--T--SSEEEECCCTTTT---C-CEEEECTTS--------CEEEE-CTTSCEEEECSCTTCTT
T ss_pred EEEeecCCceEEEE-eC--C--CeEEEECCCCCCc---c-EEEEEcCCC--------eEEEE-eCCCcEEEEecCCCCCC
Confidence 999999988 3332 21 1 2689999987532 1 234443221 12232 12222 22221111224
Q ss_pred EEEEEccCCeEEEEEe
Q 036296 271 SLLRLEMDGNLRIYTY 286 (433)
Q Consensus 271 ~rl~Ld~dG~lr~y~w 286 (433)
+|++|+.||+||+|.|
T Consensus 228 ~rl~Ld~dGnLvly~~ 243 (276)
T 3m7h_A 228 AVLRLQANGSIAILDE 243 (276)
T ss_dssp CEEEECTTSCEEEEEE
T ss_pred EEEEEcCCccEEEEcC
Confidence 6999999999999997
|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 | Back alignment and structure |
|---|
| >4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* | Back alignment and structure |
|---|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* | Back alignment and structure |
|---|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 | Back alignment and structure |
|---|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* | Back alignment and structure |
|---|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A | Back alignment and structure |
|---|
| >3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* | Back alignment and structure |
|---|
| >1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A | Back alignment and structure |
|---|
| >1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 | Back alignment and structure |
|---|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* | Back alignment and structure |
|---|
| >2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* | Back alignment and structure |
|---|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
| >3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
| >3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 | Back alignment and structure |
|---|
| >3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* | Back alignment and structure |
|---|
| >3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
| >3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} | Back alignment and structure |
|---|
| >3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* | Back alignment and structure |
|---|
| >4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* | Back alignment and structure |
|---|
| >1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 | Back alignment and structure |
|---|
| >2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M* | Back alignment and structure |
|---|
| >4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii} | Back alignment and structure |
|---|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
| >3hms_A Hepatocyte growth factor; HGF/SF, hormone/growth factor, disulfide bond, glycoprotein, kringle, pyrrolidone carboxylic acid, serine protea homolog; 1.70A {Homo sapiens} SCOP: g.10.1.1 PDB: 3hmt_A 2hgf_A 3hmr_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 433 | ||||
| d1kj1a_ | 109 | b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium | 4e-15 | |
| d1dlpa2 | 120 | b.78.1.1 (A:116-235) Fetuin-binding protein Scafet | 9e-15 | |
| d1dlpa1 | 115 | b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p | 1e-11 | |
| d1dlpa1 | 115 | b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p | 2e-04 | |
| d1xd5a_ | 112 | b.78.1.1 (A:) Gastrodianin (antifungal protein) {G | 2e-11 | |
| d1b2pa_ | 119 | b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill | 4e-09 | |
| d1b2pa_ | 119 | b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill | 6e-07 | |
| d1jpca_ | 108 | b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan | 1e-06 | |
| d1jpca_ | 108 | b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan | 3e-05 |
| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Lectin (agglutinin) species: Garlic (Allium sativum) [TaxId: 4682]
Score = 68.8 bits (168), Expect = 4e-15
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 15/105 (14%)
Query: 57 NAPFQLGFYNTTPNAYTLALRWGLTRQEPFFRWVWEANRGKPVRENATFSLGTDGNLVLA 116
P+ L L T VW +N G ++ L +DGN V+
Sbjct: 18 VEPYHFIM----QEDCNLVLYDHST-------SVWASNTGILGKKGCKAVLQSDGNFVVY 66
Query: 117 EADGTVVWQTNT-ANKGVVGFKLLSNGNMVLHDSKGNFIWQSFDY 160
+A+G +W +++ G L +GN+V++ S IW + Y
Sbjct: 67 DAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD---IWSTGTY 108
|
| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 | Back information, alignment and structure |
|---|
| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 | Back information, alignment and structure |
|---|
| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 | Back information, alignment and structure |
|---|
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 | Back information, alignment and structure |
|---|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 | Back information, alignment and structure |
|---|
| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 | Back information, alignment and structure |
|---|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 | Back information, alignment and structure |
|---|
| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 433 | |||
| d1xd5a_ | 112 | Gastrodianin (antifungal protein) {Gastrodia elata | 99.72 | |
| d1kj1a_ | 109 | Lectin (agglutinin) {Garlic (Allium sativum) [TaxI | 99.7 | |
| d1jpca_ | 108 | Lectin (agglutinin) {Snowdrop (Galanthus nivalis) | 99.67 | |
| d1dlpa2 | 120 | Fetuin-binding protein Scafet precursor {Bluebell | 99.64 | |
| d1dlpa1 | 115 | Fetuin-binding protein Scafet precursor {Bluebell | 99.61 | |
| d1b2pa_ | 119 | Lectin (agglutinin) {Bluebell (Scilla campanulata) | 99.45 | |
| d1b2pa_ | 119 | Lectin (agglutinin) {Bluebell (Scilla campanulata) | 99.11 | |
| d1dlpa1 | 115 | Fetuin-binding protein Scafet precursor {Bluebell | 99.1 | |
| d1jpca_ | 108 | Lectin (agglutinin) {Snowdrop (Galanthus nivalis) | 99.06 | |
| d1kj1a_ | 109 | Lectin (agglutinin) {Garlic (Allium sativum) [TaxI | 99.04 | |
| d1dlpa2 | 120 | Fetuin-binding protein Scafet precursor {Bluebell | 98.91 | |
| d1xd5a_ | 112 | Gastrodianin (antifungal protein) {Gastrodia elata | 98.83 | |
| d2qj2a1 | 91 | Hepatocyte growth factor {Human (Homo sapiens) [Ta | 82.46 |
| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Prism II superfamily: alpha-D-mannose-specific plant lectins family: alpha-D-mannose-specific plant lectins domain: Gastrodianin (antifungal protein) species: Gastrodia elata [TaxId: 91201]
Probab=99.72 E-value=2e-17 Score=137.53 Aligned_cols=94 Identities=23% Similarity=0.396 Sum_probs=75.1
Q ss_pred CCeEEEEEEeCCCCCeEEEEEEeecCCCCCceEEEEeCCCCCCCCCcEEEEecCCcEEEEccCCeEEEeccCCCC-ceeE
Q 036296 57 NAPFQLGFYNTTPNAYTLALRWGLTRQEPFFRWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANK-GVVG 135 (433)
Q Consensus 57 ~g~F~lGF~~~~~~~~~l~Iw~~~~~~~~~~t~vW~ANr~~pv~~~~~l~l~~~G~Lvl~~~~~~~vWst~~~~~-~~~~ 135 (433)
+|.|+|.|+. +++ |.++.. .++||.||++.|. ..+.|.|+.||+|+|+|+ +.++|++++... +..+
T Consensus 18 ~g~~~l~~q~--DGN--Lvly~~-------~~~vW~s~~~~~~-~~~~l~l~~dGnLvl~~~-~~~~w~s~t~~~~~~~~ 84 (112)
T d1xd5a_ 18 EGGYLFIIQN--DCN--LVLYDN-------NRAVWASGTNGKA-SGCVLKMQNDGNLVIYSG-SRAIWASNTNRQNGNYY 84 (112)
T ss_dssp ETTEEEEECT--TSC--EEEEET-------TEEEEECCCTTSC-SSEEEEECTTSCEEEEET-TEEEEECCCCCSCCCCE
T ss_pred ECCEEEEEcC--CCC--EEEEcC-------CcEEEEccCccCC-CCcEEEEeccccEEEEec-CCeEEEEeeccCCCceE
Confidence 3889999985 344 344432 3689999998773 347899999999999996 567888776543 4567
Q ss_pred EEEeeCCCeeeecCCCeeEEeeccCCCc
Q 036296 136 FKLLSNGNMVLHDSKGNFIWQSFDYPTD 163 (433)
Q Consensus 136 ~~Lld~GNlvl~~~~~~~lWqSFD~PTD 163 (433)
|+|+|+|||||++.+++++|||+.||+|
T Consensus 85 l~L~ddGNlvly~~~~~~~W~S~t~~~n 112 (112)
T d1xd5a_ 85 LILQRDRNVVIYDNSNNAIWATHTNVGN 112 (112)
T ss_dssp EEECTTSCEEEECTTSCEEEECCCCCCC
T ss_pred EEEcCCCCEEEECCCCcEEecCCCccCC
Confidence 9999999999999999999999999985
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| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} | Back information, alignment and structure |
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| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} | Back information, alignment and structure |
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| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
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| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
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| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
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| >d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
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| >d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
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| >d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} | Back information, alignment and structure |
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| >d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} | Back information, alignment and structure |
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| >d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} | Back information, alignment and structure |
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| >d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} | Back information, alignment and structure |
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| >d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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