Citrus Sinensis ID: 036335

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120--
Protein Sequence
MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKKH
Secondary Structure (PSIPRED)
cccccccccccccccccccccHHHHHHHHHHcccEEEEEEcEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccEEHHHHcccccccccccHHHHHHHHHHcccEEEEEEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEccc
Coil and Loop (DISEMBL)
mqglieeekldsfnapyygpcpeeLKMEIQKEGSFIIdrldhfeidwdggveeltstmslplargQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKKH
Flexible Loop (DISEMBL)
mqglieeekldsfnapyYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTstmslplargqRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGylsknsanyINLVISIIKKH
Low Complexity Region (SEG)
MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKKH
Disordered region (IsUnstruct)
*************NAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISII***
Disordered Region (DISOPRED)
MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDW***********SLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKK*
Disordered Region (DISEMBL)
MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKKH
Disordered Region (DISPRO)
*QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIK**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKKH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	122	2.2.26 [Sep-21-2011]
Q9SBK6	392	Jasmonate O-methyltransfe	N/A	no	0.975	0.303	0.5	3e-28
Q9AR07	389	Jasmonate O-methyltransfe	yes	no	0.975	0.305	0.52	3e-27
Q9SPV4	359	Salicylate O-methyltransf	N/A	no	0.975	0.331	0.408	7e-20
Q9FYZ9	364	Benzoate carboxyl methylt	N/A	no	0.983	0.329	0.368	4e-18
Q9AVJ9	378	Monomethylxanthine methyl	N/A	no	0.991	0.320	0.382	2e-15
Q9AVK0	372	7-methylxanthosine syntha	N/A	no	0.950	0.311	0.380	3e-15
A4GE69	372	7-methylxanthosine syntha	N/A	no	0.950	0.311	0.380	3e-15
Q9AVK1	385	Probable caffeine synthas	N/A	no	0.991	0.314	0.372	1e-14
Q8H0D2	384	3,7-dimethylxanthine N-me	N/A	no	0.991	0.315	0.348	5e-14
Q8H0G0	384	Theobromine synthase 2 OS	N/A	no	0.991	0.315	0.364	1e-13

>sp|Q9SBK6|JMT_BRARP Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1

 Score =  123 bits (308), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 85/124 (68%), Gaps = 5/124 (4%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGG-----VEELTS 56
           +G+IEEE +D+FNAPYY   PEELKM I+KEGSF IDRL+   +DW+GG       ++  
Sbjct: 267 EGIIEEENIDAFNAPYYAASPEELKMAIEKEGSFSIDRLEISPVDWEGGSISDDSYDIVR 326

Query: 57  TMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVI 116
                LA G+RVAKTIRAVVE M E  FG+ +MD LF RYA++V  Y+  +S  Y  +++
Sbjct: 327 FKPEALASGRRVAKTIRAVVEPMLEPTFGQKVMDELFERYAKLVGEYVYVSSPRYTIVIV 386

Query: 117 SIIK 120
           S+++
Sbjct: 387 SLLR 390

Catalyzes the methylation of jasmonate into methyljasmonate, a plant volatile that acts as an important cellular regulator mediating diverse developmental processes and defense responses.
Brassica rapa subsp. pekinensis (taxid: 51351)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 4EC: 1

>sp|Q9AR07|JMT_ARATH Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=3

 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/125 (52%), Positives = 86/125 (68%), Gaps = 6/125 (4%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGG-VEELTSTM-- 58
           +G+IEEEK+D+FNAPYY    EELKM I+KEGSF IDRL+   IDW+GG + E +  +  
Sbjct: 263 EGIIEEEKIDAFNAPYYAASSEELKMVIEKEGSFSIDRLEISPIDWEGGSISEESYDLVI 322

Query: 59  -SLP--LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLV 115
            S P  LA G+RV+ TIRAVVE M E  FG  +MD LF RYA+IV  Y   +S  Y  ++
Sbjct: 323 RSKPEALASGRRVSNTIRAVVEPMLEPTFGENVMDELFERYAKIVGEYFYVSSPRYAIVI 382

Query: 116 ISIIK 120
           +S+++
Sbjct: 383 LSLVR 387

Catalyzes the methylation of jasmonate into methyljasmonate, a plant volatile that acts as an important cellular regulator mediating diverse developmental processes and defense responses.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 1

>sp|Q9SPV4|SAMT_CLABR Salicylate O-methyltransferase OS=Clarkia breweri GN=SAMT PE=1 SV=1

 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 74/120 (61%), Gaps = 1/120 (0%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
           +GLIEEEK+D FN P Y P P E++ EI KEGSF+ID ++  EI W    ++     S+ 
Sbjct: 239 EGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVE 298

Query: 62  LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKK 121
              G  VA+ +RAV E +   HFG  I++ +F RY  ++   +SK    +IN+++S+I+K
Sbjct: 299 -EEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRK 357

Catalyzes the methylation of the free carboxyl end of the plant hormone salicylic acid (SA). Converts SA to SA methyl ester (MSA). The volatile compound MSA is hypothesized to act as an airborne signal that triggers defense responses in uninfected plants. MSA is an important chemoattractant for moth pollinated flowering plants.

Clarkia breweri (taxid: 36903)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: n

EC: 9

>sp|Q9FYZ9|BAMT_ANTMA Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1

 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 5/125 (4%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
           +GL++ + L SFN P Y PC  E++  I  EGSF +DRL+ F + WD            P
Sbjct: 240 EGLVKMDDLYSFNIPIYSPCTREVEAAILSEGSFTLDRLEVFRVCWDASDYTDDDDQQDP 299

Query: 62  LARGQR-----VAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVI 116
              G++     VA  +RA+ E M   HFG  IMDLLF +YA+ +  +LS  +++Y ++V+
Sbjct: 300 SIFGKQRSGKFVADCVRAITEPMLASHFGSTIMDLLFGKYAKKIVEHLSVENSSYFSIVV 359

Query: 117 SIIKK 121
           S+ ++
Sbjct: 360 SLSRR 364

Converts benzoic acid into the volatile ester methyl benzoates. This scent, mostly produced in a rhythmical, diurnal manner, attracts the pollinators.

Antirrhinum majus (taxid: 4151)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9AVJ9|MXMT1_COFAR Monomethylxanthine methyltransferase 1 OS=Coffea arabica GN=MXMT1 PE=1 SV=1

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 2/123 (1%)

Query: 1   MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGG--VEELTSTM 58
           ++GL+EEEKLDSFN P++ P  EE+K  +++EGS  I  L+ F+  +D    +++     
Sbjct: 250 VEGLLEEEKLDSFNIPFFTPSAEEVKCIVEEEGSCEILYLETFKAHYDAAFSIDDDYPVR 309

Query: 59  SLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISI 118
           S    + + VA  IR+V E +   HFG  IM  LF R A+     L      Y NL+IS+
Sbjct: 310 SHEQIKAEYVASLIRSVYEPILASHFGEAIMPDLFHRLAKHAAKVLHMGKGCYNNLIISL 369

Query: 119 IKK 121
            KK
Sbjct: 370 AKK 372

Involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine and of paraxanthine to caffeine. Has a 5-fold preference for 7mX.

Coffea arabica (taxid: 13443)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 5

EC: 9

>sp|Q9AVK0|XMT1_COFAR 7-methylxanthosine synthase 1 OS=Coffea arabica GN=XMT1 PE=1 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 70/121 (57%), Gaps = 5/121 (4%)

Query: 1   MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSL 60
           ++G +EEEKLDSFN P Y P  EE+K  +++EGSF I  L+ F++ +D G      ++  
Sbjct: 251 VEGHLEEEKLDSFNLPVYIPSAEEVKCIVEEEGSFEILYLETFKVLYDAGF-----SIDD 305

Query: 61  PLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIK 120
              + + VA ++RAV E +   HFG  I+  +F R+A+     L      Y NL+IS+ K
Sbjct: 306 EHIKAEYVASSVRAVYEPILASHFGEAIIPDIFHRFAKHAAKVLPLGKGFYNNLIISLAK 365

Query: 121 K 121
           K
Sbjct: 366 K 366

Involved in the biosynthesis of caffeine. Specific for xanthosine and could not use xanthosine 5'-monophosphate (XMP) as substrate. Catalyzes the 7-N-methylation activity of xanthosine, but does not have 1-N- or 3-N-methylation activity.

Coffea arabica (taxid: 13443)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 5

EC: 8

>sp|A4GE69|XMT1_COFCA 7-methylxanthosine synthase 1 OS=Coffea canephora GN=XMT1 PE=1 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 70/121 (57%), Gaps = 5/121 (4%)

Query: 1   MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSL 60
           ++G +EEEKLDSFN P Y P  EE+K  +++EGSF I  L+ F++ +D G      ++  
Sbjct: 251 VEGHLEEEKLDSFNLPVYIPSAEEVKCIVEEEGSFEILYLETFKVLYDAGF-----SIDD 305

Query: 61  PLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIK 120
              + + VA ++RAV E +   HFG  I+  +F R+A+     L      Y NL+IS+ K
Sbjct: 306 EHIKAEYVASSVRAVYEPILASHFGEAIIPDIFHRFAKHAAKVLPLGKGFYNNLIISLAK 365

Query: 121 K 121
           K
Sbjct: 366 K 366

Involved in the biosynthesis of caffeine. Specific for xanthosine. Cannot use xanthosine 5'-monophosphate (XMP) as substrate. Directly produces 7-methylxanthine, and therefore the methyl transfer and nucleoside cleavage may be coupled. Catalyzes the 7-N-methylation of xanthosine, but does not have 1-N- or 3-N-methylation activity.

Coffea canephora (taxid: 49390)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 5

EC: 8

>sp|Q9AVK1|CS3_COFAR Probable caffeine synthase 3 OS=Coffea arabica GN=CS3 PE=2 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 8/129 (6%)

Query: 1   MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGG--------VE 52
           ++G +EEEKLDSFN P Y    EELK  +++EGSF I  L+ F++ +D G        V 
Sbjct: 251 VEGHLEEEKLDSFNVPIYAASVEELKCIVEEEGSFEILYLETFKLRYDAGFSIDDDCQVR 310

Query: 53  ELTSTMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYI 112
             +   S   AR   VA  +R+V E +   HFG  I+  +F R+A      +      Y 
Sbjct: 311 SHSPEYSDEHARAAHVASLLRSVYEPILANHFGEAIIPDIFHRFATNAAKVIRLGKGFYN 370

Query: 113 NLVISIIKK 121
           NL+IS+ KK
Sbjct: 371 NLIISLAKK 379

May be involved in the biosynthesis of caffeine.

Coffea arabica (taxid: 13443)

>sp|Q8H0D2|DXMT1_COFAR 3,7-dimethylxanthine N-methyltransferase OS=Coffea arabica GN=DXMT1 PE=1 SV=1

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 8/129 (6%)

Query: 1   MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGV---EELTST 57
           ++G +EEEKLDSFN P Y P  EE+K  +++EGSF I  L+ F++ +D G    ++    
Sbjct: 250 IEGHLEEEKLDSFNVPIYAPSTEEVKCIVEEEGSFEILYLETFKVPYDAGFSIDDDYQGR 309

Query: 58  MSLPL-----ARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYI 112
              P+     AR   VA  +R++ E +   HFG  I+  L  R A+     L      Y 
Sbjct: 310 SHSPVSCDEHARAAHVASVVRSIFEPIVASHFGEAILPDLSHRIAKNAAKVLRSGKGFYD 369

Query: 113 NLVISIIKK 121
           +++IS+ KK
Sbjct: 370 SVIISLAKK 378

Involved in the biosynthesis of caffeine. Catalyzes the conversion of paraxanthine to caffeine. Can also convert 7-methylxanthine to theobromine and theobromine to caffeine, but no sequential conversion of 7-methylxanthine to caffeine was detected.

Coffea arabica (taxid: 13443)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 6

EC: 0

>sp|Q8H0G0|CTS2_COFAR Theobromine synthase 2 OS=Coffea arabica GN=CTS2 PE=1 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 1   MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGG--------VE 52
           ++G +EEEKL SFN P++ P  EE+K  +++EGSF I  L+ F+  +D G        V 
Sbjct: 250 VEGHLEEEKLASFNLPFFTPSAEEVKCIVEEEGSFEILYLETFKAHYDAGFSIDDDYPVR 309

Query: 53  ELTSTMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYI 112
                      + + VA  IR+V E +   HFG  IM  LF R A+     L      Y 
Sbjct: 310 SHFQVYGDEHIKAEYVASLIRSVYEPILASHFGEAIMPDLFHRLAKHAAKVLHLGKGCYN 369

Query: 113 NLVISIIKK 121
           NL+IS+ KK
Sbjct: 370 NLIISLAKK 378

Involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine. Does not have 1-N-methylation activity.

Coffea arabica (taxid: 13443)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 5

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	122
255538718	372	Jasmonate O-methyltransferase, putative	0.975	0.319	0.658	5e-40
356552031	381	PREDICTED: jasmonate O-methyltransferase	0.983	0.314	0.619	4e-37
356562365	374	PREDICTED: jasmonate O-methyltransferase	0.983	0.320	0.614	1e-36
358348466	408	Jasmonate O-methyltransferase [Medicago	0.983	0.294	0.590	2e-34
225458205	375	PREDICTED: jasmonate O-methyltransferase	0.983	0.32	0.598	9e-34
224085700	369	predicted protein [Populus trichocarpa]	0.967	0.319	0.638	1e-33
225458203	375	PREDICTED: jasmonate O-methyltransferase	0.983	0.32	0.581	1e-32
147772114	426	hypothetical protein VITISV_040163 [Viti	0.983	0.281	0.587	6e-32
225458207	378	PREDICTED: jasmonate O-methyltransferase	0.983	0.317	0.587	8e-32
449476849	375	PREDICTED: LOW QUALITY PROTEIN: jasmonat	0.975	0.317	0.608	2e-30

>gi|255538718|ref|XP_002510424.1| Jasmonate O-methyltransferase, putative [Ricinus communis] gi|223551125|gb|EEF52611.1| Jasmonate O-methyltransferase, putative [Ricinus communis]

 Score =  168 bits (425), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 79/120 (65%), Positives = 96/120 (80%), Gaps = 1/120 (0%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
           +G I+EEK+DSFNAPYY PC EE+K+E+QKEGSFIIDRL+ FEIDWDGG  +   T +  
Sbjct: 252 EGKIKEEKVDSFNAPYYAPCAEEMKLEVQKEGSFIIDRLEAFEIDWDGGSNDGHVTTA-A 310

Query: 62  LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKK 121
           L RGQRV+KTIRAVVESM E HFG  IMD LF R+ ++VD YLSKN   Y+NLVIS+++K
Sbjct: 311 LTRGQRVSKTIRAVVESMLETHFGSHIMDELFKRFGELVDDYLSKNRTKYVNLVISLLRK 370

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552031|ref|XP_003544375.1| PREDICTED: jasmonate O-methyltransferase-like [Glycine max]

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 75/121 (61%), Positives = 95/121 (78%), Gaps = 1/121 (0%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVE-ELTSTMSL 60
           +GL+EEEK+DSF+APYY PC EE+KMEIQKEGSFI+D  + +EIDWD G++ +  S    
Sbjct: 260 EGLLEEEKVDSFDAPYYAPCLEEMKMEIQKEGSFIVDEHEAYEIDWDAGMKLQSDSPTVT 319

Query: 61  PLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIK 120
           PL  G+RVA+TIRAVVESM E HFG  IMD LF RYA++V+ +LSK    YINLVIS++K
Sbjct: 320 PLTSGERVARTIRAVVESMLEPHFGCHIMDELFRRYAEVVEDHLSKTRTTYINLVISLVK 379

Query: 121 K 121
           +
Sbjct: 380 Q 380

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562365|ref|XP_003549442.1| PREDICTED: jasmonate O-methyltransferase-like [Glycine max]

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 75/122 (61%), Positives = 94/122 (77%), Gaps = 2/122 (1%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVE--ELTSTMS 59
           +GL+EEEK+DSF+APYY PC EE+KMEIQKEGSFI+   + +EIDWD G+E    + T  
Sbjct: 252 EGLLEEEKVDSFDAPYYAPCLEEMKMEIQKEGSFIVTEHEAYEIDWDAGMELQSDSPTTG 311

Query: 60  LPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISII 119
            PL  G+RVA++IRAVVESM E HFG  IMD LF RYAQ+V+ +LSK    YINLVIS++
Sbjct: 312 TPLTSGERVARSIRAVVESMLESHFGCHIMDELFRRYAQMVEDHLSKTRTKYINLVISLV 371

Query: 120 KK 121
           K+
Sbjct: 372 KQ 373

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358348466|ref|XP_003638267.1| Jasmonate O-methyltransferase [Medicago truncatula] gi|355504202|gb|AES85405.1| Jasmonate O-methyltransferase [Medicago truncatula]

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/122 (59%), Positives = 94/122 (77%), Gaps = 2/122 (1%)

Query: 1   MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSL 60
           ++GL+EEEK+DSFNAPYY PC EELKMEI+KEGSF++D  + +EIDWD G+E  +   + 
Sbjct: 289 LEGLVEEEKVDSFNAPYYTPCFEELKMEIEKEGSFMVDSHEAYEIDWDTGIELQSGGDT- 347

Query: 61  PLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIK 120
            ++ G+RVAKT+RAVVESM E HFG  IMD LF RYA+ V+ +LSK     INLVIS++K
Sbjct: 348 -MSSGERVAKTLRAVVESMLEYHFGSHIMDELFQRYAKHVEDHLSKTRTKCINLVISLVK 406

Query: 121 KH 122
           + 
Sbjct: 407 RQ 408

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458205|ref|XP_002281588.1| PREDICTED: jasmonate O-methyltransferase [Vitis vinifera] gi|302142531|emb|CBI19734.3| unnamed protein product [Vitis vinifera]

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 73/122 (59%), Positives = 91/122 (74%), Gaps = 2/122 (1%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEEL--TSTMS 59
           +GLIEE+K+DSF+APYY P PEE+K  I KEGSFI+DRL+ FEIDWDGG  +    +  S
Sbjct: 253 EGLIEEKKVDSFDAPYYAPSPEEVKFGIYKEGSFILDRLEMFEIDWDGGDGDNYDATPTS 312

Query: 60  LPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISII 119
             L+ G RVAKTIRAVVESM   HFG  +MD LF RY ++V  +L+K  A YINLVIS++
Sbjct: 313 STLSNGARVAKTIRAVVESMLASHFGGDVMDGLFQRYGEMVGDHLAKTRAKYINLVISLV 372

Query: 120 KK 121
           +K
Sbjct: 373 RK 374

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085700|ref|XP_002307671.1| predicted protein [Populus trichocarpa] gi|222857120|gb|EEE94667.1| predicted protein [Populus trichocarpa]

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/119 (63%), Positives = 99/119 (83%), Gaps = 1/119 (0%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
           +GL+E+EK+DSFNAPYYGPC EE+++EI+K+GSF ++RL+ FEIDWDGGV+++ +T    
Sbjct: 251 EGLVEKEKVDSFNAPYYGPCVEEMRLEIEKDGSFSVNRLETFEIDWDGGVDDVDTTSGAA 310

Query: 62  LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIK 120
           L RGQRVAKTIRAVVESM E HFG+ IMD LF RY ++V+GYLSK    Y NLVIS+++
Sbjct: 311 L-RGQRVAKTIRAVVESMLESHFGKDIMDELFRRYGEMVEGYLSKTGTKYTNLVISMVR 368

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458203|ref|XP_002281579.1| PREDICTED: jasmonate O-methyltransferase [Vitis vinifera] gi|302142533|emb|CBI19736.3| unnamed protein product [Vitis vinifera]

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 89/122 (72%), Gaps = 2/122 (1%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEEL--TSTMS 59
           +GLIEE+K+DSF+APYY P PEE+K  I KEGSFI+DRL+ FEIDWDGG  +    +  S
Sbjct: 253 EGLIEEKKVDSFDAPYYAPSPEEVKFGIYKEGSFILDRLEMFEIDWDGGDGDNYDATPTS 312

Query: 60  LPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISII 119
             L+ G RVAKTIR VVESM   HFG  +MD LF RY ++V  +L+K    YINLVIS++
Sbjct: 313 STLSNGARVAKTIRVVVESMLASHFGGDVMDGLFQRYGEMVGDHLAKTRTKYINLVISLV 372

Query: 120 KK 121
           +K
Sbjct: 373 RK 374

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147772114|emb|CAN64559.1| hypothetical protein VITISV_040163 [Vitis vinifera]

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 74/126 (58%), Positives = 86/126 (68%), Gaps = 6/126 (4%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGG------VEELT 55
           +GL+EEEK DSFN P+Y P PEE+  EIQKEGSFI+DRL+ FEIDW  G      V E  
Sbjct: 300 EGLVEEEKADSFNLPFYTPSPEEVDFEIQKEGSFILDRLETFEIDWINGNDGNSSVSEGV 359

Query: 56  STMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLV 115
              S  L+RG   +K IRAVVESM E HFG  IMD LF RY  IVD +LSK +  YI LV
Sbjct: 360 YPTSEALSRGHGHSKXIRAVVESMLEFHFGGHIMDDLFKRYGDIVDDHLSKTTPKYIVLV 419

Query: 116 ISIIKK 121
           IS++KK
Sbjct: 420 ISLVKK 425

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458207|ref|XP_002281566.1| PREDICTED: jasmonate O-methyltransferase [Vitis vinifera] gi|302142530|emb|CBI19733.3| unnamed protein product [Vitis vinifera]

 Score =  140 bits (354), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 74/126 (58%), Positives = 86/126 (68%), Gaps = 6/126 (4%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGG------VEELT 55
           +GL+EEEK DSFN P+Y P PEE+  EIQKEGSFI+DRL+ FEIDW  G      V E  
Sbjct: 252 EGLVEEEKADSFNLPFYTPSPEEVDFEIQKEGSFILDRLETFEIDWINGNDGNSSVSEGV 311

Query: 56  STMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLV 115
              S  L+RG   +K IRAVVESM E HFG  IMD LF RY  IVD +LSK +  YI LV
Sbjct: 312 YPTSEALSRGHGHSKIIRAVVESMLEFHFGGHIMDDLFKRYGDIVDDHLSKTTPKYIVLV 371

Query: 116 ISIIKK 121
           IS++KK
Sbjct: 372 ISLVKK 377

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449476849|ref|XP_004154852.1| PREDICTED: LOW QUALITY PROTEIN: jasmonate O-methyltransferase-like [Cucumis sativus]

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/120 (60%), Positives = 88/120 (73%), Gaps = 1/120 (0%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
           QGL+EE K+DSFNAPYY PC EE+K EI+KEGSF+I+R + FE++WDG   E  + + + 
Sbjct: 257 QGLVEENKIDSFNAPYYAPCMEEVKEEIEKEGSFMIERFEAFEVEWDGFASEDENGLKI- 315

Query: 62  LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKK 121
           L RGQRVAKTIRAVVE+M E HFG  IMD LF  Y  IV  YLS N   Y NLV+S +KK
Sbjct: 316 LTRGQRVAKTIRAVVETMLESHFGGHIMDALFQHYGTIVQHYLSNNRTKYTNLVVSFVKK 375

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	122
TAIR|locus:2013149	389	JMT "jasmonic acid carboxyl me	0.975	0.305	0.52	1.2e-26
TAIR|locus:2115400	371	AT4G36470 [Arabidopsis thalian	0.934	0.307	0.425	2.7e-18
TAIR|locus:2154845	354	AT5G66430 [Arabidopsis thalian	0.975	0.336	0.409	1.2e-15
TAIR|locus:2179969	385	AT5G04380 "AT5G04380" [Arabido	0.975	0.309	0.391	1.2e-15
TAIR|locus:2080747	379	BSMT1 [Arabidopsis thaliana (t	0.934	0.300	0.408	2.5e-15
TAIR|locus:2179929	415	NAMT1 [Arabidopsis thaliana (t	0.950	0.279	0.366	4.1e-13
TAIR|locus:2053458	359	AT2G14060 [Arabidopsis thalian	0.959	0.325	0.333	4.6e-12
TAIR|locus:2095572	368	AT3G21950 [Arabidopsis thalian	0.983	0.326	0.310	2.1e-09
TAIR|locus:2144466	368	AT5G38020 [Arabidopsis thalian	0.983	0.326	0.294	4.5e-09
TAIR|locus:2144461	359	AT5G38100 [Arabidopsis thalian	0.696	0.236	0.364	2.5e-08

TAIR|locus:2013149 JMT "jasmonic acid carboxyl methyltransferase" [Arabidopsis thaliana (taxid:3702)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 65/125 (52%), Positives = 86/125 (68%)

Query:     2 QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGG-VEELTSTM-- 58
             +G+IEEEK+D+FNAPYY    EELKM I+KEGSF IDRL+   IDW+GG + E +  +  
Sbjct:   263 EGIIEEEKIDAFNAPYYAASSEELKMVIEKEGSFSIDRLEISPIDWEGGSISEESYDLVI 322

Query:    59 -SLP--LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLV 115
              S P  LA G+RV+ TIRAVVE M E  FG  +MD LF RYA+IV  Y   +S  Y  ++
Sbjct:   323 RSKPEALASGRRVSNTIRAVVEPMLEPTFGENVMDELFERYAKIVGEYFYVSSPRYAIVI 382

Query:   116 ISIIK 120
             +S+++
Sbjct:   383 LSLVR 387

GO:0005634 "nucleus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=NAS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009694 "jasmonic acid metabolic process" evidence=IDA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;IMP

GO:0030795 "jasmonate O-methyltransferase activity" evidence=IMP;IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2115400 AT4G36470 [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 2.7e-18, P = 2.7e-18
 Identities = 51/120 (42%), Positives = 72/120 (60%)

Query:     2 QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
             QG  EEEKLDS++  +Y P  +E++ E+ KEGSF ++RL+  E+  D G  E        
Sbjct:   257 QGETEEEKLDSYDMHFYAPSADEIEGEVDKEGSFELERLEMLEVKKDKGNTEGD------ 310

Query:    62 LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKK 121
             ++ G+ VAKT+RAV ESM   HFG  I+D LF  Y ++VD  L+K     I  V+ + KK
Sbjct:   311 ISYGKAVAKTVRAVQESMLVQHFGEKILDKLFDTYCRMVDDELAKEDIRPITFVVVLRKK 370

GO:0005634 "nucleus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=ISS;IMP

TAIR|locus:2154845 AT5G66430 [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 50/122 (40%), Positives = 69/122 (56%)

Query:     2 QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLD-H-FEIDWDGGVEELTSTMS 59
             +GL+   K+DSFN P+Y P  EE+   I+ EGSF I+ L+ H FE+      E+      
Sbjct:   234 EGLVSASKVDSFNIPFYDPSKEEVMEMIRNEGSFEINDLEIHGFELGLSNHDEDYMLHSQ 293

Query:    60 LPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISII 119
             +  A GQR A  IRAV ESM    FG  IMD LF ++A  V  + S  +   + LV+S+I
Sbjct:   294 ISKA-GQREANCIRAVSESMLVADFGVDIMDTLFKKFAYHVSQHASCTNKTTVTLVVSLI 352

Query:   120 KK 121
             +K
Sbjct:   353 RK 354

GO:0005634 "nucleus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

TAIR|locus:2179969 AT5G04380 "AT5G04380" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 47/120 (39%), Positives = 67/120 (55%)

Query:     2 QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
             +GL+   K+ SF  P+Y P  EE+K  I+ EGSF I+ L+  E D  G  +E  S  S  
Sbjct:   267 EGLLSASKVYSFKMPFYDPNEEEVKEIIRNEGSFQINDLEMHEFDL-GHSKEKCSLQSHK 325

Query:    62 LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKK 121
                GQ+ A  IRAV E+M   HFG  I+D LF +YA  V  + S      + L++S+++K
Sbjct:   326 AKAGQKEASCIRAVTETMLVAHFGDDIIDALFHKYAHHVSQHASCRVKTSVTLIVSLVRK 385

GO:0005575 "cellular_component" evidence=ND

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2080747 BSMT1 [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 2.5e-15, P = 2.5e-15
 Identities = 49/120 (40%), Positives = 66/120 (55%)

Query:     2 QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
             +GL+ E KLD+FN P+Y P  +ELK  IQKEGSF I+ L+    D     EE        
Sbjct:   266 EGLVSESKLDAFNMPFYDPNVQELKEVIQKEGSFEINELESHGFDLGHYYEEDD------ 319

Query:    62 LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKK 121
                G+  A  IRAV E M   HFG  I+D LF +YA  V  + +  +   ++LV+S+ KK
Sbjct:   320 FEAGRNEANGIRAVSEPMLIAHFGEEIIDTLFDKYAYHVTQHANCRNKTTVSLVVSLTKK 379

GO:0005634 "nucleus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0006952 "defense response" evidence=IEP

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0051707 "response to other organism" evidence=IEP

GO:0052624 "2-phytyl-1,4-naphthoquinone methyltransferase activity" evidence=IDA

GO:0080150 "S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity" evidence=IDA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

TAIR|locus:2179929 NAMT1 [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 4.1e-13, P = 4.1e-13
 Identities = 44/120 (36%), Positives = 67/120 (55%)

Query:     2 QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
             +GL+   K+DSF  P+Y P  +E+K  +QKEGSF I  L+    D  G   +  S  S  
Sbjct:   294 EGLVSASKVDSFYLPFYDPNEKEIKEMVQKEGSFEIRDLETHGYDL-GHCNQDESKRS-- 350

Query:    62 LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKK 121
                GQ  A  IRAV E +   HFG  I+++LF ++A  V  ++S  +   +++V+S+ KK
Sbjct:   351 -KSGQNEANYIRAVSEPLLAAHFGDAIINILFNKFACHVSQHVSCRNKTTVSIVVSLTKK 409

GO:0005634 "nucleus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=IDA

TAIR|locus:2053458 AT2G14060 [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 4.6e-12, P = 4.6e-12
 Identities = 40/120 (33%), Positives = 63/120 (52%)

Query:     2 QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFE--IDWDGGVEELTSTMS 59
             +G + +  + SFN P+Y P  EE++  I KEGSF I +++ F+  + +    EE     S
Sbjct:   235 EGFVNDSMVKSFNMPFYNPNEEEVREFILKEGSFEITKIEKFDHVVPYKIDREEEDEEQS 294

Query:    60 LPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLS-KNSANYINLVISI 118
             L L  G + A   R + E +   HFG  I++ +F +YA  +  YLS  N    + LVI +
Sbjct:   295 LQLEAGIKHASWARCITEPLLVAHFGDAIIEPVFNKYAHYMAKYLSVSNHRRNMTLVIVV 354

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=TAS

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=ISS

GO:0016020 "membrane" evidence=IDA

TAIR|locus:2095572 AT3G21950 [Arabidopsis thaliana (taxid:3702)]

 Score = 144 (55.7 bits), Expect = 2.1e-09, P = 2.1e-09
 Identities = 40/129 (31%), Positives = 64/129 (49%)

Query:     2 QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDH-FEI--DWDGGVEELTSTM 58
             +G+++E  L+SFN PYY P   E+K  I+ EGSF I   +  F +   +  G  E+    
Sbjct:   240 EGVVKESDLESFNLPYYSPDESEVKEVIENEGSFEIKNFETIFGLLFSYKTGHSEVKDDD 299

Query:    59 S-LPLARGQRVAKT----IRAVVESMFELHFGRGIMDLLFTRYA-QIVDGYLSKNSANYI 112
               +  +R   V KT     R+++E M   HFG  I+D LF +Y       Y +  +   +
Sbjct:   300 DDVDHSRRFEVVKTRANMTRSIIEPMLVAHFGEAIIDRLFDKYIYHACQRYDTLRNKPTV 359

Query:   113 NLVISIIKK 121
             N  +S+ +K
Sbjct:   360 NFFVSLTRK 368

GO:0005634 "nucleus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2144466 AT5G38020 [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 4.5e-09, P = 4.5e-09
 Identities = 38/129 (29%), Positives = 63/129 (48%)

Query:     2 QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDH-FEI--DWDGGVEELTST- 57
             +G+++E  +DSFN P+Y P   E++  I+ EGSF I   +  F +   +  G  E+    
Sbjct:   240 EGIVKESDVDSFNLPFYNPDESEVREVIESEGSFKISNFETIFGLLFSYKTGRTEVKDDD 299

Query:    58 ----MSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYA-QIVDGYLSKNSANYI 112
                  S      ++ A  IR++ E M   HFG  IMD LF RY   + + Y +  +   +
Sbjct:   300 DNLDQSCRFEVIRKRASIIRSITEPMLGAHFGDAIMDRLFERYTYHLAERYDTLRNKPTV 359

Query:   113 NLVISIIKK 121
                +S+ +K
Sbjct:   360 QFFVSLTRK 368

GO:0005634 "nucleus" evidence=ISM

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=TAS

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2144461 AT5G38100 [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 35/96 (36%), Positives = 52/96 (54%)

Query:     3 GLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPL 62
             G+  EEK+D F+ P Y P   ELK EI+K GSF I+ ++      +G  + LT+      
Sbjct:   250 GITSEEKIDLFSLPVYFPQFSELKGEIEKNGSFTIELMETTSHPLEG--KPLTNDF---- 303

Query:    63 ARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQ 98
                  +  T RA + ++ E HFG G++D LF R A+
Sbjct:   304 -----ITSTFRAFLTTIIEKHFGDGVVDELFYRLAK 334

GO:0008168 "methyltransferase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	122
pfam03492	331	pfam03492, Methyltransf_7, SAM dependent carboxyl	8e-41
PLN02668	386	PLN02668, PLN02668, indole-3-acetate carboxyl meth	3e-10

>gnl|CDD|217591 pfam03492, Methyltransf_7, SAM dependent carboxyl methyltransferase

 Score =  137 bits (347), Expect = 8e-41
 Identities = 60/123 (48%), Positives = 78/123 (63%), Gaps = 4/123 (3%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
           +GLIEEEKLDSFN P Y P PEE+K  I+KEGSF I+RL+  +   +G V    S     
Sbjct: 210 EGLIEEEKLDSFNIPIYAPSPEEVKEIIEKEGSFTIERLEIIKHP-NGEVPWDESDSEDK 268

Query: 62  LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSAN---YINLVISI 118
           +  G+ VA ++RAVVE M   HFG  IMD LF RYA+ +  +LSK   N    IN+V+S+
Sbjct: 269 VEDGRFVASSVRAVVEPMLVAHFGEDIMDKLFDRYAKKLSEHLSKELQNAKKTINVVVSL 328

Query: 119 IKK 121
            +K
Sbjct: 329 SRK 331

This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine. Caffeine is synthesised through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyzes the second step to produce theobromine. Length = 331

>gnl|CDD|178273 PLN02668, PLN02668, indole-3-acetate carboxyl methyltransferase

 Score = 55.6 bits (134), Expect = 3e-10
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 4/94 (4%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
           +GL+  EK DSFN P Y P  ++ K  ++  GSF ID+L+ F+    GG   + +     
Sbjct: 269 EGLVTSEKRDSFNIPVYAPSLQDFKEVVEANGSFAIDKLEVFK----GGSPLVVNEPDDA 324

Query: 62  LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTR 95
              G+ +A + R+V   + + H G  + + LF R
Sbjct: 325 AEVGRAMANSCRSVAGVLVDAHIGEELSNELFLR 358

Length = 386

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	122
PLN02668	386	indole-3-acetate carboxyl methyltransferase	100.0
PF03492	334	Methyltransf_7: SAM dependent carboxyl methyltrans	100.0

>PLN02668 indole-3-acetate carboxyl methyltransferase

Probab=100.00  E-value=1.1e-36  Score=249.16  Aligned_cols=116  Identities=28%  Similarity=0.438  Sum_probs=106.6

Q ss_pred             CCCCcccccCCccccCccCCCHHHHHHHHHhcCceeEeeeeeeeccCCCCcccccccCCcchhhHHHHHHHHHHHHHHHH
Q 036335            1 MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMF   80 (122)
Q Consensus         1 ~eGlI~eeklDsFNiP~Y~ps~eEv~~~Ie~eGsF~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~RAv~Epll   80 (122)
                      +||+|++||+||||+|+|+||++||+++|+++|||+|+++|+++.+|+++++.    ..|....|+++|+++||++||||
T Consensus       268 ~eGlI~eek~dsFniP~Y~ps~eEv~~~Ie~~gsF~I~~le~~~~~~~~~~~~----~~d~~~~g~~~a~~~RA~~E~ll  343 (386)
T PLN02668        268 QEGLVTSEKRDSFNIPVYAPSLQDFKEVVEANGSFAIDKLEVFKGGSPLVVNE----PDDAAEVGRAMANSCRSVAGVLV  343 (386)
T ss_pred             HcCCCCHHHHhcccCcccCCCHHHHHHHHhhcCCEEeeeeEEeeccCcccccC----cccHHHHHHHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999875432    24556789999999999999999


Q ss_pred             HHhhhhhhHHHHHHHHHHHHhhhhhh--cCCCeEEEEEEEee
Q 036335           81 ELHFGRGIMDLLFTRYAQIVDGYLSK--NSANYINLVISIIK  120 (122)
Q Consensus        81 ~~HFG~~i~deLF~r~~~~v~~~~~~--~~~~~~~i~vsL~r  120 (122)
                      ++|||++|||+||+||+++++++++.  ++.+++++++||.-
T Consensus       344 ~~HFG~~i~D~lF~r~~~~v~~~~~~~~~~~~~~~~~~sL~~  385 (386)
T PLN02668        344 DAHIGEELSNELFLRVERRATSHAKELLEKLQFFHIVASLSF  385 (386)
T ss_pred             HHHcCHHHHHHHHHHHHHHHHHHHHhhcccCceEEEEEEEec
Confidence            99999999999999999999999988  88899999999963

>PF03492 Methyltransf_7: SAM dependent carboxyl methyltransferase; InterPro: IPR005299 This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine

Probab=100.00  E-value=1.7e-36  Score=244.08  Aligned_cols=120  Identities=43%  Similarity=0.690  Sum_probs=98.2

Q ss_pred             CCCCcccccCCccccCccCCCHHHHHHHHHhcCceeEeeeeeeeccCCCCcccccccCCcchhhHHHHHHHHHHHHHHHH
Q 036335            1 MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMF   80 (122)
Q Consensus         1 ~eGlI~eeklDsFNiP~Y~ps~eEv~~~Ie~eGsF~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~RAv~Epll   80 (122)
                      +||+|++||+|+||+|+|+||++||+++|+++|||+|++||+++.+|.....+ .....|...+|+.+|+++||++||+|
T Consensus       212 ~eGlI~~ek~dsfniP~Y~ps~eEv~~~I~~~gsF~I~~le~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~iRA~~e~~l  290 (334)
T PF03492_consen  212 AEGLISEEKVDSFNIPIYFPSPEEVRAIIEEEGSFEIEKLELFEQPWWSVPDD-ESWKEDAKEYARNVANYIRAVFEPLL  290 (334)
T ss_dssp             HTTSS-HCCCCTG--SBB---HHHHHHHHHHHTSEEEEEEEEEEEETCCTCTT-T-STTTHHCHHHHHHHHHHHHHHHHH
T ss_pred             HcCCcCHHHhhceeCCccCCCHHHHHHHHhcCCCEEEEEEEEEeecccccchh-hhcccchhhhHHHHHHhHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999664432211 11234567899999999999999999


Q ss_pred             HHhhhhhhHHHHHHHHHHHHhhhhhhcC---CCeEEEEEEEeec
Q 036335           81 ELHFGRGIMDLLFTRYAQIVDGYLSKNS---ANYINLVISIIKK  121 (122)
Q Consensus        81 ~~HFG~~i~deLF~r~~~~v~~~~~~~~---~~~~~i~vsL~rk  121 (122)
                      ++|||++|||+||+||+++++++++..+   .+++++++||+||
T Consensus       291 ~~hfG~ei~D~LF~r~~~~v~~~~~~~~~~~~~~~~i~~~L~Rk  334 (334)
T PF03492_consen  291 KAHFGEEIMDELFERYAKKVAEHLEKEKSRNMKFVNIVVSLTRK  334 (334)
T ss_dssp             HHHH-HHHHHHHHHHHHHHHHHHHHHTHTT-BEEEEEEEEEEE-
T ss_pred             HHHhChHHHHHHHHHHHHHHHHHHHHhhccCCCcEEEEEEEeeC
Confidence            9999999999999999999999997655   8899999999998

Caffeine is synthesized through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyses the second step to produce theobromine [].; GO: 0008168 methyltransferase activity; PDB: 2EFJ_A 1M6E_X 2EG5_C 3B5I_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	122
1m6e_X	359	Crystal Structure Of Salicylic Acid Carboxyl Methyl		5e-21
2eg5_A	372	The Structure Of Xanthosine Methyltransferase Lengt		2e-16
2efj_A	384	The Structure Of 1,7 Dimethylxanthine Methyltransfe		2e-14
3b5i_A	374	Crystal Structure Of Indole-3-Acetic Acid Methyltra		9e-08

>pdb|1M6E|X Chain X, Crystal Structure Of Salicylic Acid Carboxyl Methyltransferase (Samt) Length = 359

Iteration: 1
 Score = 95.9 bits (237), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
           +GLIEEEK+D FN P Y P P E++ EI KEGSF+ID ++  EI W    ++     S+ 
Sbjct: 239 EGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVE 298
Query: 62  LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKK 121
              G  VA+ +RAV E +   HFG  I++ +F RY  ++   +SK    +IN+++S+I+K
Sbjct: 299 -EEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRK 357

>pdb|2EG5|A Chain A, The Structure Of Xanthosine Methyltransferase Length = 372

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Query: 1   MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSL 60
           ++G +EEEKLDSFN P Y P  EE+K  +++EGSF I  L+ F++ +D G      ++  
Sbjct: 251 VEGHLEEEKLDSFNLPVYIPSAEEVKCIVEEEGSFEILYLETFKVLYDAGF-----SIDD 305
Query: 61  PLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIK 120
              + + VA ++RAV E +   HFG  I+  +F R+A+     L      Y NL+IS+ K
Sbjct: 306 EHIKAEYVASSVRAVYEPILASHFGEAIIPDIFHRFAKHAAKVLPLGKGFYNNLIISLAK 365
Query: 121 K 121
           K
Sbjct: 366 K 366

>pdb|2EFJ|A Chain A, The Structure Of 1,7 Dimethylxanthine Methyltransferase Length = 384

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 1   MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGV---EELTST 57
           ++G +EEEKLDSFN P Y P  EE+K  +++EGSF I  L+ F   +D G    ++    
Sbjct: 250 IEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDDYQGR 309
Query: 58  MSLPL-----ARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYI 112
              P+     AR   VA  +R++ E +   HFG  I+  L  R A+     L      Y 
Sbjct: 310 SHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSHRIAKNAAKVLRSGKGFYD 369
Query: 113 NLVISIIKK 121
           +++IS+ KK
Sbjct: 370 SVIISLAKK 378

>pdb|3B5I|A Chain A, Crystal Structure Of Indole-3-Acetic Acid Methyltransferase Length = 374

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
           +GL+  EK D FN P Y P  ++ K  +   GSF ID+L    + + GG   + +     
Sbjct: 257 EGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKL----VVYKGGSPLVVNEPDDA 312
Query: 62  LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTR 95
              G+  A + R+V   + E H G  + + LF+R
Sbjct: 313 SEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSR 346

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	122
1m6e_X	359	S-adenosyl-L-methionnine:salicylic acid carboxyl m	3e-37
2efj_A	384	3,7-dimethylxanthine methyltransferase; SAM-depend	6e-35
3b5i_A	374	S-adenosyl-L-methionine:salicylic acid carboxyl me	4e-33

>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 Length = 359

 Score =  128 bits (322), Expect = 3e-37
 Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 1/121 (0%)

Query: 1   MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSL 60
            +GLIEEEK+D FN P Y P P E++ EI KEGSF+ID ++  EI W    ++     S 
Sbjct: 238 SEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGS- 296

Query: 61  PLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIK 120
               G  VA+ +RAV E +   HFG  I++ +F RY  ++   +SK    +IN+++S+I+
Sbjct: 297 VEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIR 356

Query: 121 K 121
           K
Sbjct: 357 K 357

>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* Length = 384

 Score =  123 bits (308), Expect = 6e-35
 Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 8/129 (6%)

Query: 1   MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSL 60
           ++G +EEEKLDSFN P Y P  EE+K  +++EGSF I  L+ F   +D G          
Sbjct: 250 IEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDDYQGR 309

Query: 61  --------PLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYI 112
                     AR   VA  +R++ E +   HFG  I+  L  R A+     L      Y 
Sbjct: 310 SHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSHRIAKNAAKVLRSGKGFYD 369

Query: 113 NLVISIIKK 121
           +++IS+ KK
Sbjct: 370 SVIISLAKK 378

>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} Length = 374

 Score =  117 bits (295), Expect = 4e-33
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 6/122 (4%)

Query: 1   MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSL 60
            +GL+  EK D FN P Y P  ++ K  +   GSF ID+L  ++      V E       
Sbjct: 256 REGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNE----PDD 311

Query: 61  PLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSAN--YINLVISI 118
               G+  A + R+V   + E H G  + + LF+R       +      N  + ++V S+
Sbjct: 312 ASEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATSHAKDVLVNLQFFHIVASL 371

Query: 119 IK 120
             
Sbjct: 372 SF 373

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	122
1m6e_X	359	S-adenosyl-L-methionnine:salicylic acid carboxyl m	100.0
2efj_A	384	3,7-dimethylxanthine methyltransferase; SAM-depend	99.97
3b5i_A	374	S-adenosyl-L-methionine:salicylic acid carboxyl me	99.96
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	94.05
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	91.47
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	87.96
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	87.9
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	83.98
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	81.85
3f4k_A	257	Putative methyltransferase; structural genomics, P	81.71

>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35

Probab=100.00  E-value=1.4e-32  Score=222.27  Aligned_cols=120  Identities=40%  Similarity=0.705  Sum_probs=109.1

Q ss_pred             CCCcccccCCccccCccCCCHHHHHHHHHhcCceeEeeeeeeeccCCCCcccccccCCcchhhHHHHHHHHHHHHHHHHH
Q 036335            2 QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMFE   81 (122)
Q Consensus         2 eGlI~eeklDsFNiP~Y~ps~eEv~~~Ie~eGsF~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~RAv~Epll~   81 (122)
                      +|+|++||+|+||+|+|.||++|++++|+++|+|+|+++|+++..|++++++ .+...+....|+.+|+++||++||+|.
T Consensus       239 eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~~~~~-~d~~~~~~~~g~~~a~~~Ra~~e~ll~  317 (359)
T 1m6e_X          239 EGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKD-GDGGGSVEEEGYNVARCMRAVAEPLLL  317 (359)
T ss_dssp             TTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSC-TTCCSSTTTTTTHHHHHHHHHHHHHHH
T ss_pred             ccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCcccch-hhhhhhhhHhHhHhhhhhhhhcchhhH
Confidence            7999999999999999999999999999999999999999999999886442 112234457899999999999999999


Q ss_pred             HhhhhhhHHHHHHHHHHHHhhhhhhcCCCeEEEEEEEeecC
Q 036335           82 LHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKKH  122 (122)
Q Consensus        82 ~HFG~~i~deLF~r~~~~v~~~~~~~~~~~~~i~vsL~rk~  122 (122)
                      +|||++|||+||+||+++++++++.++.++++++++|+||.
T Consensus       318 ~hfG~~i~d~lf~ry~~~~~~~~~~~~~~~~~~~~~L~k~~  358 (359)
T 1m6e_X          318 DHFGEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRKS  358 (359)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEBCC
T ss_pred             HhccHHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEeCC
Confidence            99999999999999999999999888899999999999984

>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*

Probab=99.97  E-value=6.5e-32  Score=220.00  Aligned_cols=121  Identities=37%  Similarity=0.561  Sum_probs=107.1

Q ss_pred             CCCcccccCCccccCccCCCHHHHHHHHHhcCceeEeeeeeeeccCCCC---ccccc--ccC-C--cchhhHHHHHHHHH
Q 036335            2 QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGG---VEELT--STM-S--LPLARGQRVAKTIR   73 (122)
Q Consensus         2 eGlI~eeklDsFNiP~Y~ps~eEv~~~Ie~eGsF~I~~le~~~~~~~~~---~~~~~--~~~-~--~~~~~~~~~a~~~R   73 (122)
                      +|+|+++|+|+||+|+|.||++|++++|+++|+|+|+++|+++..|+++   +++.+  .+. .  |....|+.+|+++|
T Consensus       251 eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~a~~iR  330 (384)
T 2efj_A          251 EGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDDYQGRSHSPVSCDEHARAAHVASVVR  330 (384)
T ss_dssp             HTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC---------CCSHHHHHHHHHHHHHHHH
T ss_pred             hCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeecccccccccccccccccccccchHhHhHHHhhhhhH
Confidence            6999999999999999999999999999999999999999999999885   33110  001 0  34578999999999


Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhcCCCeEEEEEEEeecC
Q 036335           74 AVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKKH  122 (122)
Q Consensus        74 Av~Epll~~HFG~~i~deLF~r~~~~v~~~~~~~~~~~~~i~vsL~rk~  122 (122)
                      |++||+|.+|||++|||+||+||+++++++++.++.++++++++|+||.
T Consensus       331 a~~epll~~hfG~~i~d~lF~ry~~~~~~~~~~~~~~~~~~~~~L~k~~  379 (384)
T 2efj_A          331 SIYEPILASHFGEAILPDLSHRIAKNAAKVLRSGKGFYDSVIISLAKKP  379 (384)
T ss_dssp             HHHHHHHHHHHCSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEEECC
T ss_pred             HhhhhhhHHhccHHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEEcc
Confidence            9999999999999999999999999999999988999999999999984

>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}

Probab=99.96  E-value=5.9e-30  Score=207.71  Aligned_cols=115  Identities=27%  Similarity=0.366  Sum_probs=104.6

Q ss_pred             CCCCcccccCCccccCccCCCHHHHHHHHHhcCceeEeeeeeeeccCCCCcccccccCCcchhhHHHHHHHHHHHHHHHH
Q 036335            1 MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMF   80 (122)
Q Consensus         1 ~eGlI~eeklDsFNiP~Y~ps~eEv~~~Ie~eGsF~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~RAv~Epll   80 (122)
                      .+|+|+++++|+||+|+|+||++|++++|+++|+|+|+++|+++.+|+++.++    ..+....|+.+|+++||++||+|
T Consensus       256 ~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~~~~~----~~~~~~~g~~~a~~~Ra~~e~ll  331 (374)
T 3b5i_A          256 REGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNE----PDDASEVGRAFASSCRSVAGVLV  331 (374)
T ss_dssp             SSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCCCCSS----TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCccccc----cchhHHHHHHHHHHHHHhccchh
Confidence            47999999999999999999999999999999999999999999999875432    23446789999999999999999


Q ss_pred             HHhhhhhhHHHHHHHHHHHHhhhhh--hcCCC--eEEEEEEEe
Q 036335           81 ELHFGRGIMDLLFTRYAQIVDGYLS--KNSAN--YINLVISII  119 (122)
Q Consensus        81 ~~HFG~~i~deLF~r~~~~v~~~~~--~~~~~--~~~i~vsL~  119 (122)
                      .+|||++|||+||+||+++++++++  .++.+  ++++++||+
T Consensus       332 ~~hfg~~i~d~lf~ry~~~~~~~~~~~~~~~~~~~~~~~~~l~  374 (374)
T 3b5i_A          332 EAHIGEELSNKLFSRVESRATSHAKDVLVNLQFFHIVASLSFT  374 (374)
T ss_dssp             HTTSCHHHHHHHHHHHHHHHHHTCHHHHTTCCCEEEEEEEEEC
T ss_pred             HhhccHHHHHHHHHHHHHHHHHhHHHhhhccccceEEEEEEeC
Confidence            9999999999999999999999987  66777  899999985

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=94.05  E-value=0.44  Score=35.10  Aligned_cols=80  Identities=16%  Similarity=0.133  Sum_probs=53.3

Q ss_pred             ccccCccCCCHHHHHHHHHhcCceeEeeeeeeeccCCCCcccccccCCcchhhHHHHHHHHHHHHHHHHHHhhhhhhHHH
Q 036335           12 SFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDL   91 (122)
Q Consensus        12 sFNiP~Y~ps~eEv~~~Ie~eGsF~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~RAv~Epll~~HFG~~i~de   91 (122)
                      .+.-|.+.++.+++++++++.| |++.+++.+..++.. ..           +...+..++++...|++. .++.+..++
T Consensus       180 ~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~-~~-----------~~~~~~~~l~~~~~~~~~-~~~~~~~~~  245 (279)
T 3ccf_A          180 QALNPWYFPSIGEYVNILEKQG-FDVTYAALFNRPTTL-AE-----------GEFGMANWIQMFASAFLV-GLTPDQQVQ  245 (279)
T ss_dssp             GGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEEECCEEC-SS-----------GGGHHHHHHHHHCHHHHT-TCCHHHHHH
T ss_pred             cCcCceeCCCHHHHHHHHHHcC-CEEEEEEEecccccc-cC-----------CHHHHHHHHHHhhHHHhc-cCCHHHHHH
Confidence            3455778899999999999999 999888877544322 10           112344455555555553 467777888


Q ss_pred             HHHHHHHHHhhhhh
Q 036335           92 LFTRYAQIVDGYLS  105 (122)
Q Consensus        92 LF~r~~~~v~~~~~  105 (122)
                      +..++.+.+.++..
T Consensus       246 ~~~~~~~~~~~~~~  259 (279)
T 3ccf_A          246 LIRKVEATLQDKLY  259 (279)
T ss_dssp             HHHHHHHHHHHHHE
T ss_pred             HHHHHHHHHHhhcc
Confidence            88888777776543

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=91.47  E-value=2.7  Score=30.40  Aligned_cols=67  Identities=7%  Similarity=0.109  Sum_probs=43.6

Q ss_pred             ccCCCHHHHHHHHHhcCceeEeeeeeeeccCCCCcccccccCCcchhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 036335           17 YYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRY   96 (122)
Q Consensus        17 ~Y~ps~eEv~~~Ie~eGsF~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~RAv~Epll~~HFG~~i~deLF~r~   96 (122)
                      .+.++.+++++++++.| |++.+++.+...+..              .-..+...+++..+. +..++|++..+.+...+
T Consensus       191 ~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  254 (273)
T 3bus_A          191 LSLGGIDEYESDVRQAE-LVVTSTVDISAQARP--------------SLVKTAEAFENARSQ-VEPFMGAEGLDRMIATF  254 (273)
T ss_dssp             CCCCCHHHHHHHHHHTT-CEEEEEEECHHHHTT--------------HHHHHHHHHHHTHHH-HHHHHCHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHcC-CeEEEEEECcHhHHH--------------HHHHHHHHHHHhHHH-HHhhcCHHHHHHHHHHH
Confidence            35689999999999999 888887766433211              112223333443444 45778988888887777


Q ss_pred             HHH
Q 036335           97 AQI   99 (122)
Q Consensus        97 ~~~   99 (122)
                      ...
T Consensus       255 ~~~  257 (273)
T 3bus_A          255 RGL  257 (273)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=87.96  E-value=4.1  Score=30.17  Aligned_cols=81  Identities=10%  Similarity=0.158  Sum_probs=45.4

Q ss_pred             cCCCHHHHHHHHHhcCceeEeeeeeeeccCCCCcccccccCCcchhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Q 036335           18 YGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYA   97 (122)
Q Consensus        18 Y~ps~eEv~~~Ie~eGsF~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~RAv~Epll~~HFG~~i~deLF~r~~   97 (122)
                      +.||++++.+.+++.| |++..++.+...+.              ..-..+...+++-.+- +.+.||++..+ ++..|-
T Consensus       219 ~~~s~~~~~~~l~~aG-f~~~~~~~~~~~y~--------------~tl~~w~~~~~~~~~~-~~~~~~~~~~~-~w~~yl  281 (302)
T 3hem_A          219 RLPRISQVDYYSSNAG-WKVERYHRIGANYV--------------PTLNAWADALQAHKDE-AIALKGQETCD-IYMHYL  281 (302)
T ss_dssp             CCCCHHHHHHHHHHHT-CEEEEEEECGGGHH--------------HHHHHHHHHHHHTHHH-HHHHHCHHHHH-HHHHHH
T ss_pred             CCCCHHHHHHHHHhCC-cEEEEEEeCchhHH--------------HHHHHHHHHHHHhHHH-HHHHhCHHHHH-HHHHHH
Confidence            7899999999999988 88888876533211              1122222233333322 34457766554 455554


Q ss_pred             HHHhhhhhhcCCCeEEEE
Q 036335           98 QIVDGYLSKNSANYINLV  115 (122)
Q Consensus        98 ~~v~~~~~~~~~~~~~i~  115 (122)
                      ...+..+........+++
T Consensus       282 ~~~~~~f~~~~~~~~q~~  299 (302)
T 3hem_A          282 RGCSDLFRDKYTDVCQFT  299 (302)
T ss_dssp             HHHHHHHHTTSSEEEEEE
T ss_pred             HHHHHHHhCCCCeEEEEE
Confidence            444444555554444433

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=87.90  E-value=0.88  Score=32.62  Aligned_cols=90  Identities=7%  Similarity=0.064  Sum_probs=56.1

Q ss_pred             ccCCCHHHHHHHHHhcCceeEeeeeeeeccCCCCcccccccCCcchhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 036335           17 YYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRY   96 (122)
Q Consensus        17 ~Y~ps~eEv~~~Ie~eGsF~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~RAv~Epll~~HFG~~i~deLF~r~   96 (122)
                      .+.++.+++++++++.| |++...+..  .|.. .           .+...+...+++.+.|.+ .+.+++..+++..++
T Consensus       171 ~~~~~~~~~~~~l~~~G-f~~~~~~~~--~~~~-~-----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  234 (263)
T 2yqz_A          171 LHAKRLKEVEEALRRLG-LKPRTREVA--RWRE-E-----------RTPREALEALSERLYSFT-QGLPEPVHARVMERL  234 (263)
T ss_dssp             HHHHHHHHHHHHHHHTT-CCCEEEEEE--EEEE-E-----------ECHHHHHHHHHTTCSGGG-SSSCHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHcC-CCcceEEEe--eeec-C-----------CCHHHHHHHHHHhhcccc-cCCCHHHHHHHHHHH
Confidence            34568899999999999 887766544  3322 0           123444555555444543 467788888888888


Q ss_pred             HHHHhhhhhhcC---CCeEEEEEEEeecC
Q 036335           97 AQIVDGYLSKNS---ANYINLVISIIKKH  122 (122)
Q Consensus        97 ~~~v~~~~~~~~---~~~~~i~vsL~rk~  122 (122)
                      .+.+.+......   .-...+++..-||+
T Consensus       235 ~~~l~~~~~~~~~~~~~~~~~~~~~~rkp  263 (263)
T 2yqz_A          235 WAWAEAELGDLDRPFPVEKRFLLRVSRLG  263 (263)
T ss_dssp             HHHHHHHSSCTTSCEEEEEEEEEEEEECC
T ss_pred             HHHHHHhcCCcCccccccceeEEEeeecC
Confidence            888877654322   22345566666664

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=83.98  E-value=9.3  Score=27.06  Aligned_cols=73  Identities=7%  Similarity=0.097  Sum_probs=47.4

Q ss_pred             CccCCCHHHHHHHHHhcCceeEeeeeeee-ccCCCCcccccccCCcchhhHHHHHHHHHHH-HHHHHHHhhhhhhHHHHH
Q 036335           16 PYYGPCPEELKMEIQKEGSFIIDRLDHFE-IDWDGGVEELTSTMSLPLARGQRVAKTIRAV-VESMFELHFGRGIMDLLF   93 (122)
Q Consensus        16 P~Y~ps~eEv~~~Ie~eGsF~I~~le~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~RAv-~Epll~~HFG~~i~deLF   93 (122)
                      +...++.+++++++++.| |+|+..+... ..+               .+...+..++++. +.+.+ .+++.+-.+++.
T Consensus       164 ~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~~~---------------~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~  226 (259)
T 2p35_A          164 RKPLPPPSDYFNALSPKS-SRVDVWHTVYNHPM---------------KDADSIVEWVKGTGLRPYL-AAAGEENREAFL  226 (259)
T ss_dssp             -CCCCCHHHHHHHHGGGE-EEEEEEEEEEEEEE---------------SCHHHHHHHHTTTTTTHHH-HTTCGGGHHHHH
T ss_pred             ccCCCCHHHHHHHHHhcC-CceEEEEEEeeecc---------------CCchHHhhhhhcCcchHHH-HhCCHHHHHHHH
Confidence            456689999999999998 6776555321 111               1234455566654 33444 467777888888


Q ss_pred             HHHHHHHhhhhh
Q 036335           94 TRYAQIVDGYLS  105 (122)
Q Consensus        94 ~r~~~~v~~~~~  105 (122)
                      .++.+.+.+++.
T Consensus       227 ~~~~~~~~~~~~  238 (259)
T 2p35_A          227 ADYTRRIAAAYP  238 (259)
T ss_dssp             HHHHHHHHHHSC
T ss_pred             HHHHHHHHHhCC
Confidence            888888887654

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=81.85  E-value=8.5  Score=27.99  Aligned_cols=25  Identities=16%  Similarity=0.267  Sum_probs=20.6

Q ss_pred             cCCCHHHHHHHHHhcCceeEeeeeee
Q 036335           18 YGPCPEELKMEIQKEGSFIIDRLDHF   43 (122)
Q Consensus        18 Y~ps~eEv~~~Ie~eGsF~I~~le~~   43 (122)
                      +.||++++++++++.| |++.+++.+
T Consensus       204 ~~~s~~~~~~~l~~aG-f~~~~~~~~  228 (287)
T 1kpg_A          204 RLPSIPMVQECASANG-FTVTRVQSL  228 (287)
T ss_dssp             CCCCHHHHHHHHHTTT-CEEEEEEEC
T ss_pred             CCCCHHHHHHHHHhCC-cEEEEEEeC
Confidence            4579999999999977 888877755

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=81.71  E-value=12  Score=26.55  Aligned_cols=83  Identities=13%  Similarity=0.032  Sum_probs=50.0

Q ss_pred             CCCHHHHHHHHHhcCceeEeeeeeeec-cCCC-CcccccccCCcchhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 036335           19 GPCPEELKMEIQKEGSFIIDRLDHFEI-DWDG-GVEELTSTMSLPLARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRY   96 (122)
Q Consensus        19 ~ps~eEv~~~Ie~eGsF~I~~le~~~~-~~~~-~~~~~~~~~~~~~~~~~~~a~~~RAv~Epll~~HFG~~i~deLF~r~   96 (122)
                      .++.+++.+++++.| |++.....+.. .|.. +..                  ..+...+.+...|-+....+++-++.
T Consensus       173 ~~~~~~~~~~l~~aG-f~~v~~~~~~~~~w~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (257)
T 3f4k_A          173 ISVIPTCIDKMERAG-YTPTAHFILPENCWTEHYFA------------------PQDEVRETFMKEHAGNKTAMDFMKGQ  233 (257)
T ss_dssp             CCBHHHHHHHHHHTT-EEEEEEEECCGGGTCCCCCH------------------HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHCC-CeEEEEEECChhhHHHHHHH------------------HHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence            568999999999988 88777665543 3632 111                  12233444455566666666666666


Q ss_pred             HHHHhhhhhhcCCCeEEEEEEEeec
Q 036335           97 AQIVDGYLSKNSANYINLVISIIKK  121 (122)
Q Consensus        97 ~~~v~~~~~~~~~~~~~i~vsL~rk  121 (122)
                      ..-...+ ......+-..++.++|+
T Consensus       234 ~~~~~~~-~~~~~~~g~~~~v~~k~  257 (257)
T 3f4k_A          234 QYERSLY-SKYKDYYGYVFYIGQKR  257 (257)
T ss_dssp             HHHHHHH-HHHTTTEEEEEEEEEEC
T ss_pred             HHHHHHH-HHhCCccceEEEEEecC
Confidence            6555544 22244556667777764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	122
d1m6ex_	359	c.66.1.35 (X:) Salicylic acid carboxyl methyltrans	4e-39

>d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} Length = 359

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Salicylic acid carboxyl methyltransferase (SAMT)
domain: Salicylic acid carboxyl methyltransferase (SAMT)
species: Clarkia breweri [TaxId: 36903]

 Score =  132 bits (333), Expect = 4e-39
 Identities = 49/120 (40%), Positives = 73/120 (60%), Gaps = 1/120 (0%)

Query: 2   QGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLP 61
           +GLIEEEK+D FN P Y P P E++ EI KEGSF+ID ++  EI W    ++     S  
Sbjct: 239 EGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGS-V 297

Query: 62  LARGQRVAKTIRAVVESMFELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKK 121
              G  VA+ +RAV E +   HFG  I++ +F RY  ++   +SK    +IN+++S+I+K
Sbjct: 298 EEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRK 357

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	122
d1m6ex_	359	Salicylic acid carboxyl methyltransferase (SAMT) {	100.0
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	89.27
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	88.28

>d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Salicylic acid carboxyl methyltransferase (SAMT)
domain: Salicylic acid carboxyl methyltransferase (SAMT)
species: Clarkia breweri [TaxId: 36903]

Probab=100.00  E-value=1.7e-38  Score=255.03  Aligned_cols=121  Identities=40%  Similarity=0.686  Sum_probs=112.4

Q ss_pred             CCCCcccccCCccccCccCCCHHHHHHHHHhcCceeEeeeeeeeccCCCCcccccccCCcchhhHHHHHHHHHHHHHHHH
Q 036335            1 MQGLIEEEKLDSFNAPYYGPCPEELKMEIQKEGSFIIDRLDHFEIDWDGGVEELTSTMSLPLARGQRVAKTIRAVVESMF   80 (122)
Q Consensus         1 ~eGlI~eeklDsFNiP~Y~ps~eEv~~~Ie~eGsF~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~RAv~Epll   80 (122)
                      ++|+|++||+|+||+|+|+||++||+++|+++|||+|+++|+++.+|++++++. +...|...+|+.+|+++||++||+|
T Consensus       238 ~eGlI~eek~dsfn~P~Y~ps~eEv~~~ie~~gsF~i~~~e~~~~~~~~~~~~~-~~~~d~~~~~~~~a~~~RA~~e~~l  316 (359)
T d1m6ex_         238 SEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDG-DGGGSVEEEGYNVARCMRAVAEPLL  316 (359)
T ss_dssp             HTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCT-TCCSSTTTTTTHHHHHHHHHHHHHH
T ss_pred             HcCCCCHHHHHhccCccccCCHHHHHHHhccCCCeeeeeeEeeecccccccccc-cccccHHHHHHHHHHHHHHHHHHHH
Confidence            379999999999999999999999999999999999999999999999975532 2345667889999999999999999


Q ss_pred             HHhhhhhhHHHHHHHHHHHHhhhhhhcCCCeEEEEEEEeecC
Q 036335           81 ELHFGRGIMDLLFTRYAQIVDGYLSKNSANYINLVISIIKKH  122 (122)
Q Consensus        81 ~~HFG~~i~deLF~r~~~~v~~~~~~~~~~~~~i~vsL~rk~  122 (122)
                      ++|||++|||+||+||+++|+++++.++.+++++++||+||.
T Consensus       317 ~~hfg~~i~D~lF~r~~~~v~~~~~~~~~~~~~~~~sL~rK~  358 (359)
T d1m6ex_         317 LDHFGEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRKS  358 (359)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEBCC
T ss_pred             HHHcChHHHHHHHHHHHHHHHhhHhhcCCceEEEEEEEEecC
Confidence            999999999999999999999999999999999999999995

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.27  E-value=2.2  Score=30.70  Aligned_cols=25  Identities=16%  Similarity=0.267  Sum_probs=20.8

Q ss_pred             cCCCHHHHHHHHHhcCceeEeeeeee
Q 036335           18 YGPCPEELKMEIQKEGSFIIDRLDHF   43 (122)
Q Consensus        18 Y~ps~eEv~~~Ie~eGsF~I~~le~~   43 (122)
                      +.||.+++...+++.| |+|...+.+
T Consensus       202 ~lPsl~~~~~~~e~ag-f~v~~~~~~  226 (285)
T d1kpga_         202 RLPSIPMVQECASANG-FTVTRVQSL  226 (285)
T ss_dssp             CCCCHHHHHHHHHTTT-CEEEEEEEC
T ss_pred             CCCChhhHHHHHHHhc-hhhcccccc
Confidence            5799999999998877 888777655

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.28  E-value=1.2  Score=31.88  Aligned_cols=25  Identities=20%  Similarity=0.194  Sum_probs=20.8

Q ss_pred             cCCCHHHHHHHHHhcCceeEeeeeee
Q 036335           18 YGPCPEELKMEIQKEGSFIIDRLDHF   43 (122)
Q Consensus        18 Y~ps~eEv~~~Ie~eGsF~I~~le~~   43 (122)
                      +.||.+|+.+.+++.| |+|...+.+
T Consensus       192 ~lPS~~~l~~~~e~aG-f~v~~~~~~  216 (280)
T d2fk8a1         192 RLPSTEMMVEHGEKAG-FTVPEPLSL  216 (280)
T ss_dssp             CCCCHHHHHHHHHHTT-CBCCCCEEC
T ss_pred             cccchHhhhhhHHhhc-cccceeeec
Confidence            6899999999999876 888776654