Citrus Sinensis ID: 036352

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490---
MSHPTAKEAQEQAIPKTLEKYEQLCELSRAYPLAKTSASSVSQGCREFLKLANKVVSPEPKFVPAMHHCLVSSMSLARNFSSKSQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSFGGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNRREPPNEGALYRSREEFSS
cccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccccccccccHHHHHHHcccccccccEEEEEcccccEEEEEEEccccEEEcccccccccccccccccEEEEEcccccEEEcccccccccccccccHHHHHHcccccccccccccccccEEEEcccccEEEEEccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHccccccEEEEEccHHHHHHHHHcccccccEEEEEEcccccEEEEEEEEccEEEEEEccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccccccccccEEEEcccccc
cccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccEEEEEEEEccEEEEcccccccccEcccccccccEEEEccccHHHHHHHHHHHHHccccccEEEHHHHHccccccHHHHHccccEEEEccccccEEEEEEEcEcHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEEEHHHHHHHHccccccccEEEEEcccccEEEEEEEEEccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEEHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccHHcccEEEEEccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHccccccccccccEEEEcHHHccc
MSHPTAKEAQEQAIPKTLEKYEQLCELSrayplaktsassVSQGCREFLKLANkvvspepkfvpamhHCLVSSmslarnfssksqgnvlgidlGTTYSRVAVMqgedpvvieeveggrytkksfrsmpsvvffkpngeswvgRQANMmtslypsralfdtkhlvgtvydsskvqtslypkivrgfkgeawvetefgifspAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGdiagldiqgvvEDPVAAALAYGLDKRDGLFAVysfggtfefSILEISNGVIKVKAKRkslshggldfDLLLVRHLWREftrchafdashyPLVLQRFLGAAERAKvrlssepqvEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANitrkdldgILVVGGLGCVPSVREYMELFfgksplksprgvtpdeAVVIGAAIHgekfryvnrreppnegalyrsreefss
mshptakeaqeqaiPKTLEKYEQLCELSRAYPLAKTSASSVSQGCREFLKLANKVVSPEPKFVPAMHHCLVSSMSLARNFSSKSQGNVLGIDLGTTYSRVAVMqgedpvvieeveggrytkksfrsmpsvvfFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVydsskvqtslyPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSFGGTFEFSILEISNGVIKVKAKRkslshggldFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLssepqvevklhnllniqvkkslvqkdlevTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFgksplksprgvTPDEAVVIGAAihgekfryvnrreppnegalyrsreefss
MSHPTAKEAQEQAIPKTLEKYEQLCELSRAYPLAKTSASSVSQGCREFLKLANKVVSPEPKFVPAMHHCLVSSMSLARNFSSKSQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSFGGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKdldgilvvgglgCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNRREPPNEGALYRSREEFSS
********************YEQLCELSRAYPLA********QGCREFLKLANKVVSPEPKFVPAMHHCLVSSMSLARNFS**SQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSFGGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPL****GVTPDEAVVIGAAIHGEKFRYV********************
**********************QLCELSRAYPL******************************************************VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSFGGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNRREPPNEGALYRS******
***********QAIPKTLEKYEQLCELSRAYP***********GCREFLKLANKVVSPEPKFVPAMHHCLVSSMSLARNFSSKSQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSFGGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNRREPPNEGALYRSREEFSS
*********QEQAIPKTLEKYEQLCELSRAYPLAKTSASSVSQGCREFLKLANKVVSPEPKFVPAMHHCLVSSMSLARNFSSKSQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSFGGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNRREPPNEG***R*******
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MSHPTAKEAQEQAIPKTLEKYEQLCELSRAYPLAKTSASSVSQGCREFLKLANKVVSPEPKFVPAMHHCLVSSMSLARNFSSKSQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSFGGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNRREPPNEGALYRSREEFSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query493 2.2.26 [Sep-21-2011]
Q01899 675 Heat shock 70 kDa protein N/A no 0.801 0.585 0.478 7e-94
Q08276 682 Heat shock 70 kDa protein N/A no 0.774 0.560 0.493 1e-92
P37900 675 Heat shock 70 kDa protein N/A no 0.776 0.567 0.480 4e-92
Q9LDZ0 682 Heat shock 70 kDa protein yes no 0.776 0.561 0.472 3e-88
Q8GUM2 682 Heat shock 70 kDa protein no no 0.774 0.560 0.468 2e-87
P38646 679 Stress-70 protein, mitoch yes no 0.762 0.553 0.436 7e-82
P48721 679 Stress-70 protein, mitoch yes no 0.762 0.553 0.439 8e-82
O35501 679 Stress-70 protein, mitoch yes no 0.762 0.553 0.439 9e-82
B8EIP9 634 Chaperone protein DnaK OS yes no 0.740 0.575 0.450 1e-81
Q3ZCH0 679 Stress-70 protein, mitoch yes no 0.762 0.553 0.434 2e-81
>sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial OS=Phaseolus vulgaris PE=2 SV=1 Back     alignment and function desciption
 Score =  344 bits (883), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 201/420 (47%), Positives = 260/420 (61%), Gaps = 25/420 (5%)

Query: 57  SPEPKFVPAMHHCLVSSMSLARNFSSKSQGN-VLGIDLGTTYSRVAVMQGEDPVVIEEVE 115
           S +P +V     CL      AR FSS+  GN V+GIDLGTT S V+VM+G++P VIE  E
Sbjct: 27  STKPAYVAQKWSCL------ARPFSSRPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSE 80

Query: 116 GGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ- 174
           G R T       PSVV F   GE  VG  A       P+  +F TK L+G  +D  + Q 
Sbjct: 81  GARTT-------PSVVAFNQKGELLVGTPAKRQAVTNPTNTVFGTKRLIGRRFDDPQTQK 133

Query: 175 -TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPA 232
              + P KIV+   G+AWVE     +SP++I AF+L KM+   E YL +S +KAVI+VPA
Sbjct: 134 EMKMVPFKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPA 193

Query: 233 CFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSF-GGTFEFSILE 291
            FN+AQR+A K AG IAGLD+Q ++ +P AAAL+YG++ ++GL AV+   GGTF+ SILE
Sbjct: 194 YFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILE 253

Query: 292 ISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAK 351
           ISNGV +VKA       GG DFD  L+  L  EF R  + D S   L LQR   AAE+AK
Sbjct: 254 ISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKRTESIDLSKDRLALQRLREAAEKAK 313

Query: 352 VRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEV 411
           + LSS  Q E+   NL  I    S   K L +T+TRS+FE+LV+ LIE T A C+ CL+ 
Sbjct: 314 IELSSTSQTEI---NLPFITADASGA-KHLNITLTRSKFEALVNHLIERTKAPCKSCLKD 369

Query: 412 ANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFR 471
           AN++ KD+D +L+VGG+  VP V+E +   FGKSP K   GV PDEAV +GAAI G   R
Sbjct: 370 ANVSIKDVDEVLLVGGMTRVPKVQEVVLNIFGKSPSK---GVNPDEAVAMGAAIQGGILR 426

Phaseolus vulgaris (taxid: 3885)
>sp|Q08276|HSP7M_SOLTU Heat shock 70 kDa protein, mitochondrial OS=Solanum tuberosum GN=HSP68 PE=2 SV=1 Back     alignment and function description
>sp|P37900|HSP7M_PEA Heat shock 70 kDa protein, mitochondrial OS=Pisum sativum GN=HSP1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LDZ0|HSP7J_ARATH Heat shock 70 kDa protein 10, mitochondrial OS=Arabidopsis thaliana GN=HSP70-10 PE=1 SV=1 Back     alignment and function description
>sp|Q8GUM2|HSP7I_ARATH Heat shock 70 kDa protein 9, mitochondrial OS=Arabidopsis thaliana GN=HSP70-9 PE=1 SV=1 Back     alignment and function description
>sp|P38646|GRP75_HUMAN Stress-70 protein, mitochondrial OS=Homo sapiens GN=HSPA9 PE=1 SV=2 Back     alignment and function description
>sp|P48721|GRP75_RAT Stress-70 protein, mitochondrial OS=Rattus norvegicus GN=Hspa9 PE=1 SV=3 Back     alignment and function description
>sp|O35501|GRP75_CRIGR Stress-70 protein, mitochondrial OS=Cricetulus griseus GN=HSPA9 PE=2 SV=1 Back     alignment and function description
>sp|B8EIP9|DNAK_METSB Chaperone protein DnaK OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=dnaK PE=3 SV=1 Back     alignment and function description
>sp|Q3ZCH0|GRP75_BOVIN Stress-70 protein, mitochondrial OS=Bos taurus GN=HSPA9 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
255554571 657 heat shock protein, putative [Ricinus co 0.776 0.582 0.5 3e-93
356554826 674 PREDICTED: heat shock 70 kDa protein, mi 0.776 0.568 0.495 9e-93
356521247 677 PREDICTED: heat shock 70 kDa protein, mi 0.776 0.565 0.492 3e-92
399940 675 RecName: Full=Heat shock 70 kDa protein, 0.801 0.585 0.478 5e-92
356549495 674 PREDICTED: heat shock 70 kDa protein, mi 0.776 0.568 0.492 6e-92
224105855 682 predicted protein [Populus trichocarpa] 0.821 0.593 0.466 7e-92
225429228 679 PREDICTED: heat shock 70 kDa protein, mi 0.776 0.564 0.5 8e-92
296088081 613 unnamed protein product [Vitis vinifera] 0.776 0.624 0.5 8e-92
356524786 677 PREDICTED: heat shock 70 kDa protein, mi 0.776 0.565 0.490 1e-91
224060991 683 predicted protein [Populus trichocarpa] 0.774 0.559 0.483 3e-91
>gi|255554571|ref|XP_002518324.1| heat shock protein, putative [Ricinus communis] gi|223542544|gb|EEF44084.1| heat shock protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  348 bits (893), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 201/402 (50%), Positives = 255/402 (63%), Gaps = 19/402 (4%)

Query: 75  SLARNFSSKSQGN-VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFF 133
           SL+R FSSK  GN V+GIDLGTT S VAVM+G++P VIE  EG R T       PSVV F
Sbjct: 45  SLSRAFSSKPAGNDVIGIDLGTTNSCVAVMEGKNPKVIENSEGSRTT-------PSVVAF 97

Query: 134 KPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAW 190
              GE  VG  A       P+  +F TK L+G  +D  + Q    + P KIVR   G+AW
Sbjct: 98  NQKGELLVGTPAKRQAVTNPTNTVFGTKRLIGRKFDDPQTQKEMKMVPYKIVRASNGDAW 157

Query: 191 VETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAG 250
           VE     +SP++I AF+L KM+   E YL ++ TKAVI+VPA FN+AQR+A K AG IAG
Sbjct: 158 VEANGQQYSPSQIGAFVLTKMKETSEAYLGKTVTKAVITVPAYFNDAQRQATKDAGRIAG 217

Query: 251 LDIQGVVEDPVAAALAYGLDKRDGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHG 309
           LD+Q ++ +P AAAL+YG++ ++GL AV+   GGTF+ SILEISNGV +VKA       G
Sbjct: 218 LDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLG 277

Query: 310 GLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLN 369
           G DFD  L+ +L  EF R  A D +   L LQR   AAE+AK+ LSS  Q E+   NL  
Sbjct: 278 GEDFDNALLEYLVSEFKRTEAIDLTKDRLALQRLREAAEKAKIELSSTAQTEI---NLPF 334

Query: 370 IQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLG 429
           I    S   K L +T+TRS+FESLV+ LIE T A C+ CL+ A I+ KD+D +L+VGG+ 
Sbjct: 335 ITADASGA-KHLNITLTRSKFESLVNHLIERTRAPCKNCLKDAGISTKDVDEVLLVGGMT 393

Query: 430 CVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFR 471
            VP V+E +   FGKSP K   GV PDEAV +GAAI G   R
Sbjct: 394 RVPKVQEIVSEIFGKSPSK---GVNPDEAVAMGAAIQGGILR 432

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356554826|ref|XP_003545743.1| PREDICTED: heat shock 70 kDa protein, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|356521247|ref|XP_003529268.1| PREDICTED: heat shock 70 kDa protein, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|399940|sp|Q01899.1|HSP7M_PHAVU RecName: Full=Heat shock 70 kDa protein, mitochondrial; Flags: Precursor gi|22636|emb|CAA47345.1| 70 kDa heat shock protein [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|356549495|ref|XP_003543129.1| PREDICTED: heat shock 70 kDa protein, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|224105855|ref|XP_002313955.1| predicted protein [Populus trichocarpa] gi|222850363|gb|EEE87910.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225429228|ref|XP_002263457.1| PREDICTED: heat shock 70 kDa protein, mitochondrial-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296088081|emb|CBI35440.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356524786|ref|XP_003531009.1| PREDICTED: heat shock 70 kDa protein, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|224060991|ref|XP_002300311.1| predicted protein [Populus trichocarpa] gi|222847569|gb|EEE85116.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
TAIR|locus:2144801 682 MTHSC70-2 "mitochondrial HSO70 0.768 0.555 0.462 1e-75
TAIR|locus:2121022 682 mtHsc70-1 "mitochondrial heat 0.766 0.554 0.458 1.2e-74
RGD|1311806 679 Hspa9 "heat shock protein 9" [ 0.762 0.553 0.431 2.1e-70
UNIPROTKB|P48721 679 Hspa9 "Stress-70 protein, mito 0.762 0.553 0.431 2.1e-70
UNIPROTKB|P38646 679 HSPA9 "Stress-70 protein, mito 0.762 0.553 0.429 4.3e-70
MGI|MGI:96245 679 Hspa9 "heat shock protein 9" [ 0.762 0.553 0.431 4.3e-70
UNIPROTKB|Q3ZCH0 679 HSPA9 "Stress-70 protein, mito 0.762 0.553 0.429 5.5e-70
UNIPROTKB|E2RAU5 679 HSPA9 "Stress-70 protein, mito 0.762 0.553 0.429 5.5e-70
UNIPROTKB|F1RGJ3 679 HSPA9 "Stress-70 protein, mito 0.762 0.553 0.426 1.8e-69
ZFIN|ZDB-GENE-030828-12 682 hspa9 "heat shock protein 9" [ 0.762 0.551 0.426 3e-69
TAIR|locus:2144801 MTHSC70-2 "mitochondrial HSO70 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
 Identities = 184/398 (46%), Positives = 234/398 (58%)

Query:    75 SLARNFSSKSQGN-VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFF 133
             S +R FSSK  GN V+GIDLGTT S VAVM+G++P VIE  EG R T       PSVV F
Sbjct:    45 SFSRAFSSKPAGNDVIGIDLGTTNSCVAVMEGKNPKVIENAEGARTT-------PSVVAF 97

Query:   134 KPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSL--YP-KIVRGFKGEAW 190
                GE  VG  A       P+  +  TK L+G  +D  + Q  +   P KIVR   G+AW
Sbjct:    98 NTKGELLVGTPAKRQAVTNPTNTVSGTKRLIGRKFDDPQTQKEMKMVPYKIVRAPNGDAW 157

Query:   191 VETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAG 250
             VE     +SP++I AFIL KM+   E YL +S TKAV++VPA FN+AQR+A K AG IAG
Sbjct:   158 VEANGQQYSPSQIGAFILTKMKETAEAYLGKSVTKAVVTVPAYFNDAQRQATKDAGRIAG 217

Query:   251 LDIQGVVEDPVAAALAYGLDKRDGLFAVYSFGG-TFEFSILEISNGVIKVKAKRKSLSHG 309
             LD++ ++ +P AAAL+YG+  ++GL AV+  GG TF+ S+LEISNGV +VKA       G
Sbjct:   218 LDVERIINEPTAAALSYGMTNKEGLIAVFDLGGGTFDVSVLEISNGVFEVKATNGDTFLG 277

Query:   310 GLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLN 369
             G DFD  L+  L  EF      D +   L LQR   AAE+AK+ LSS  Q E+   NL  
Sbjct:   278 GEDFDNALLDFLVNEFKTTEGIDLAKDRLALQRLREAAEKAKIELSSTSQTEI---NLPF 334

Query:   370 IQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKXXXXXXXXXXXX 429
             I    S   K   +T+TRS FE+LV+ LIE T   C+ CL+ A I+ K            
Sbjct:   335 ITADASGA-KHFNITLTRSRFETLVNHLIERTRDPCKNCLKDAGISAKEVDEVLLVGGMT 393

Query:   430 CVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHG 467
              VP V+  +   FGKSP K   GV PDEAV +GAA+ G
Sbjct:   394 RVPKVQSIVAEIFGKSPSK---GVNPDEAVAMGAALQG 428
GO:0005524 "ATP binding" evidence=IEA;IDA
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0006457 "protein folding" evidence=IEA;RCA;TAS
GO:0051082 "unfolded protein binding" evidence=IEA
GO:0005759 "mitochondrial matrix" evidence=TAS
GO:0009408 "response to heat" evidence=IEP;RCA
GO:0009507 "chloroplast" evidence=IDA
GO:0009615 "response to virus" evidence=IEP
GO:0005618 "cell wall" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP
GO:0005794 "Golgi apparatus" evidence=RCA
GO:0009644 "response to high light intensity" evidence=RCA
GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
GO:0042542 "response to hydrogen peroxide" evidence=RCA
TAIR|locus:2121022 mtHsc70-1 "mitochondrial heat shock protein 70-1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
RGD|1311806 Hspa9 "heat shock protein 9" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P48721 Hspa9 "Stress-70 protein, mitochondrial" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P38646 HSPA9 "Stress-70 protein, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:96245 Hspa9 "heat shock protein 9" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q3ZCH0 HSPA9 "Stress-70 protein, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RAU5 HSPA9 "Stress-70 protein, mitochondrial" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RGJ3 HSPA9 "Stress-70 protein, mitochondrial" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030828-12 hspa9 "heat shock protein 9" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
cd11733377 cd11733, HSPA9-like_NBD, Nucleotide-binding domain 1e-119
cd10234376 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding d 1e-109
pfam00012 598 pfam00012, HSP70, Hsp70 protein 1e-108
PTZ00400 663 PTZ00400, PTZ00400, DnaK-type molecular chaperone; 1e-107
PRK00290 627 PRK00290, dnaK, molecular chaperone DnaK; Provisio 1e-106
TIGR02350 595 TIGR02350, prok_dnaK, chaperone protein DnaK 1e-104
cd10170369 cd10170, HSP70_NBD, Nucleotide-binding domain of t 1e-102
cd11734373 cd11734, Ssq1_like_NBD, Nucleotide-binding domain 7e-99
PTZ00186 657 PTZ00186, PTZ00186, heat shock 70 kDa precursor pr 3e-93
COG0443 579 COG0443, DnaK, Molecular chaperone [Posttranslatio 2e-86
cd10236355 cd10236, HscA_like_NBD, Nucleotide-binding domain 7e-86
cd10241374 cd10241, HSPA5-like_NBD, Nucleotide-binding domain 2e-85
PRK13411 653 PRK13411, PRK13411, molecular chaperone DnaK; Prov 6e-81
cd10233376 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding 2e-76
CHL00094 621 CHL00094, dnaK, heat shock protein 70 2e-75
TIGR01991 599 TIGR01991, HscA, Fe-S protein assembly chaperone H 4e-73
PRK13410 668 PRK13410, PRK13410, molecular chaperone DnaK; Prov 8e-70
PTZ00009 653 PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro 4e-69
cd10235339 cd10235, HscC_like_NBD, Nucleotide-binding domain 7e-67
PRK05183 616 PRK05183, hscA, chaperone protein HscA; Provisiona 1e-64
PLN03184 673 PLN03184, PLN03184, chloroplast Hsp70; Provisional 2e-62
cd10237417 cd10237, HSPA13-like_NBD, Nucleotide-binding domai 2e-56
cd10230388 cd10230, HYOU1-like_NBD, Nucleotide-binding domain 2e-51
cd10228381 cd10228, HSPA4_like_NDB, Nucleotide-binding domain 4e-48
cd11732377 cd11732, HSP105-110_like_NBD, Nucleotide-binding d 7e-43
PRK01433 595 PRK01433, hscA, chaperone protein HscA; Provisiona 3e-41
cd10238375 cd10238, HSPA14-like_NBD, Nucleotide-binding domai 5e-37
cd10232386 cd10232, ScSsz1p_like_NBD, Nucleotide-binding doma 3e-29
cd11739383 cd11739, HSPH1_NBD, Nucleotide-binding domain of H 4e-29
cd11737383 cd11737, HSPA4_NBD, Nucleotide-binding domain of H 6e-27
cd11738383 cd11738, HSPA4L_NBD, Nucleotide-binding domain of 3e-24
cd10231415 cd10231, YegD_like, Escherichia coli YegD, a putat 1e-23
cd10229404 cd10229, HSPA12_like_NBD, Nucleotide-binding domai 2e-14
pfam06723327 pfam06723, MreB_Mbl, MreB/Mbl protein 3e-06
cd10225320 cd10225, MreB_like, MreB and similar proteins 2e-05
PRK11678450 PRK11678, PRK11678, putative chaperone; Provisiona 5e-04
PRK13928336 PRK13928, PRK13928, rod shape-determining protein 0.002
TIGR00904333 TIGR00904, mreB, cell shape determining protein, M 0.004
>gnl|CDD|212683 cd11733, HSPA9-like_NBD, Nucleotide-binding domain of human HSPA9, Escherichia coli DnaK, and similar proteins Back     alignment and domain information 
 Score =  353 bits (909), Expect = e-119
 Identities = 177/388 (45%), Positives = 238/388 (61%), Gaps = 19/388 (4%)

Query: 85  QGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQ 144
           +G V+GIDLGTT S VAVM+G+ P VIE  EG R T       PSVV F  +GE  VG  
Sbjct: 1   KGAVIGIDLGTTNSCVAVMEGKTPKVIENAEGARTT-------PSVVAFTKDGERLVGMP 53

Query: 145 ANMMTSLYPSRALFDTKHLVGTVYDSSKVQ---TSLYPKIVRGFKGEAWVETEFGIFSPA 201
           A       P   L+ TK L+G  +D  +VQ    ++  KIV+   G+AWVE     +SP+
Sbjct: 54  AKRQAVTNPENTLYATKRLIGRRFDDPEVQKDIKNVPYKIVKASNGDAWVEAHGKKYSPS 113

Query: 202 KIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPV 261
           +I AF+L KM+   E YL +    AVI+VPA FN++QR+A K AG IAGL++  V+ +P 
Sbjct: 114 QIGAFVLMKMKETAEAYLGKPVKNAVITVPAYFNDSQRQATKDAGQIAGLNVLRVINEPT 173

Query: 262 AAALAYGLDKR-DGLFAVYSF-GGTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVR 319
           AAALAYGLDK+ D + AVY   GGTF+ SILEI  GV +VK+       GG DFD  L+R
Sbjct: 174 AAALAYGLDKKDDKVIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDNALLR 233

Query: 320 HLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQK 379
           HL +EF +    D +   + LQR   AAE+AK+ LSS  Q ++   NL  I    S   K
Sbjct: 234 HLVKEFKKEQGIDLTKDNMALQRLREAAEKAKIELSSSLQTDI---NLPYITADASG-PK 289

Query: 380 DLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYME 439
            L + +TR++FESLV +LI+ T   C+K L+ A +++ D+  +++VGG+  +P V+E ++
Sbjct: 290 HLNMKLTRAKFESLVGDLIKRTIEPCKKALKDAGVSKSDIGEVILVGGMTRMPKVQETVK 349

Query: 440 LFFGKSPLKSPRGVTPDEAVVIGAAIHG 467
             FGK P K   GV PDEAV IGAAI G
Sbjct: 350 EIFGKEPSK---GVNPDEAVAIGAAIQG 374

This subgroup includes human mitochondrial HSPA9 (also known as 70-kDa heat shock protein 9, CSA; MOT; MOT2; GRP75; PBP74; GRP-75; HSPA9B; MTHSP75; the gene encoding HSPA9 maps to 5q31.1), Escherichia coli DnaK, and Saccharomyces cerevisiae Stress-Seventy subfamily C/Ssc1p (also called mtHSP70, Endonuclease SceI 75 kDa subunit). It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs); for Escherichia coli DnaK, these are the DnaJ and GrpE, respectively. HSPA9 is involved in multiple processses including mitochondrial import, antigen processing, control of cellular proliferation and differentiation, and regulation of glucose responses. During glucose deprivation-induced cellular stress, HSPA9 plays an important role in the suppression of apoptosis by inhibiting a conformational change in Bax that allow the release of cytochrome c. DnaK modulates the heat shock response in Escherichia coli. It protects E. coli from protein carbonylation, an irreversible oxidative modification that increases during organism aging and bacterial growth arrest. Under severe thermal stress, it functions as part of a bi-chaperone system: the DnaK system and the ring-forming AAA+ chaperone ClpB (Hsp104) system, to promote cell survival. DnaK has also been shown to cooperate with GroEL and the ribosome-associated Escherichia coli Trigger Factor in the proper folding of cytosolic proteins. S. cerevisiae Ssc1p is the major HSP70 chaperone of the mitochondrial matrix, promoting translocation of proteins from the cytosol, across the inner membrane, to the matrix, and their subsequent folding. Ssc1p interacts with Tim44, a peripheral inner membrane protein associated with the TIM23 protein translocase. It is also a subunit of the endoSceI site-specific endoDNase and is required for full endoSceI activity. Ssc1p plays roles in the import of Yfh1p, a nucleus-encoded mitochondrial protein involved in iron homeostasis (and a homolog of human frataxin, implicated in the neurodegenerative disease, Friedreich's ataxia). Ssc1 also participates in translational regulation of cytochrome c oxidase (COX) biogenesis by interacting with Mss51 and Mss51-containing complexes. Length = 377
>gnl|CDD|212676 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding domain of human HSPA9 and similar proteins Back     alignment and domain information
>gnl|CDD|215656 pfam00012, HSP70, Hsp70 protein Back     alignment and domain information
>gnl|CDD|240403 PTZ00400, PTZ00400, DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|233830 TIGR02350, prok_dnaK, chaperone protein DnaK Back     alignment and domain information
>gnl|CDD|212667 cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family Back     alignment and domain information
>gnl|CDD|212684 cd11734, Ssq1_like_NBD, Nucleotide-binding domain of Saccharomyces cerevisiae Ssq1 and similar proteins Back     alignment and domain information
>gnl|CDD|140213 PTZ00186, PTZ00186, heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|212678 cd10236, HscA_like_NBD, Nucleotide-binding domain of HscA and similar proteins Back     alignment and domain information
>gnl|CDD|212681 cd10241, HSPA5-like_NBD, Nucleotide-binding domain of human HSPA5 and similar proteins Back     alignment and domain information
>gnl|CDD|184039 PRK13411, PRK13411, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|212675 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins Back     alignment and domain information
>gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70 Back     alignment and domain information
>gnl|CDD|233673 TIGR01991, HscA, Fe-S protein assembly chaperone HscA Back     alignment and domain information
>gnl|CDD|184038 PRK13410, PRK13410, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional Back     alignment and domain information
>gnl|CDD|212677 cd10235, HscC_like_NBD, Nucleotide-binding domain of Escherichia coli HscC and similar proteins Back     alignment and domain information
>gnl|CDD|235360 PRK05183, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|215618 PLN03184, PLN03184, chloroplast Hsp70; Provisional Back     alignment and domain information
>gnl|CDD|212679 cd10237, HSPA13-like_NBD, Nucleotide-binding domain of human HSPA13 and similar proteins Back     alignment and domain information
>gnl|CDD|212672 cd10230, HYOU1-like_NBD, Nucleotide-binding domain of human HYOU1 and similar proteins Back     alignment and domain information
>gnl|CDD|212670 cd10228, HSPA4_like_NDB, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins Back     alignment and domain information
>gnl|CDD|212682 cd11732, HSP105-110_like_NBD, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4, HYOU1, and similar proteins Back     alignment and domain information
>gnl|CDD|234955 PRK01433, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|212680 cd10238, HSPA14-like_NBD, Nucleotide-binding domain of human HSPA14 and similar proteins Back     alignment and domain information
>gnl|CDD|212674 cd10232, ScSsz1p_like_NBD, Nucleotide-binding domain of Saccharmomyces cerevisiae Ssz1pp and similar proteins Back     alignment and domain information
>gnl|CDD|212689 cd11739, HSPH1_NBD, Nucleotide-binding domain of HSPH1 Back     alignment and domain information
>gnl|CDD|212687 cd11737, HSPA4_NBD, Nucleotide-binding domain of HSPA4 Back     alignment and domain information
>gnl|CDD|212688 cd11738, HSPA4L_NBD, Nucleotide-binding domain of HSPA4L Back     alignment and domain information
>gnl|CDD|212673 cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins Back     alignment and domain information
>gnl|CDD|212671 cd10229, HSPA12_like_NBD, Nucleotide-binding domain of HSPA12A, HSPA12B and similar proteins Back     alignment and domain information
>gnl|CDD|115385 pfam06723, MreB_Mbl, MreB/Mbl protein Back     alignment and domain information
>gnl|CDD|212668 cd10225, MreB_like, MreB and similar proteins Back     alignment and domain information
>gnl|CDD|236954 PRK11678, PRK11678, putative chaperone; Provisional Back     alignment and domain information
>gnl|CDD|237563 PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>gnl|CDD|129982 TIGR00904, mreB, cell shape determining protein, MreB/Mrl family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 493
KOG0100 663 consensus Molecular chaperones GRP78/BiP/KAR2, HSP 100.0
PTZ00186 657 heat shock 70 kDa precursor protein; Provisional 100.0
PTZ00400 663 DnaK-type molecular chaperone; Provisional 100.0
PRK13410 668 molecular chaperone DnaK; Provisional 100.0
PRK13411 653 molecular chaperone DnaK; Provisional 100.0
PRK00290 627 dnaK molecular chaperone DnaK; Provisional 100.0
PLN03184 673 chloroplast Hsp70; Provisional 100.0
PTZ00009 653 heat shock 70 kDa protein; Provisional 100.0
TIGR02350 595 prok_dnaK chaperone protein DnaK. Members of this 100.0
TIGR01991 599 HscA Fe-S protein assembly chaperone HscA. The Hea 100.0
CHL00094 621 dnaK heat shock protein 70 100.0
KOG0102 640 consensus Molecular chaperones mortalin/PBP74/GRP7 100.0
PRK05183 616 hscA chaperone protein HscA; Provisional 100.0
PF00012 602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 100.0
COG0443 579 DnaK Molecular chaperone [Posttranslational modifi 100.0
KOG0101 620 consensus Molecular chaperones HSP70/HSC70, HSP70 100.0
KOG0103 727 consensus Molecular chaperones HSP105/HSP110/SSE1, 100.0
PRK01433 595 hscA chaperone protein HscA; Provisional 100.0
KOG0104 902 consensus Molecular chaperones GRP170/SIL1, HSP70 100.0
PRK11678450 putative chaperone; Provisional 100.0
PRK13928336 rod shape-determining protein Mbl; Provisional 100.0
PRK13929335 rod-share determining protein MreBH; Provisional 100.0
PRK13927334 rod shape-determining protein MreB; Provisional 100.0
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 100.0
PRK13930335 rod shape-determining protein MreB; Provisional 100.0
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 100.0
COG1077342 MreB Actin-like ATPase involved in cell morphogene 100.0
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 99.97
PRK15080267 ethanolamine utilization protein EutJ; Provisional 99.96
TIGR01174371 ftsA cell division protein FtsA. This bacterial ce 99.92
PRK09472420 ftsA cell division protein FtsA; Reviewed 99.92
COG0849418 ftsA Cell division ATPase FtsA [Cell division and 99.89
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 99.8
smart00268373 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki 99.76
PTZ00280414 Actin-related protein 3; Provisional 99.69
PTZ00452375 actin; Provisional 99.67
COG4820277 EutJ Ethanolamine utilization protein, possible ch 99.66
PRK13917344 plasmid segregation protein ParM; Provisional 99.62
PF00022393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 99.62
PTZ00466380 actin-like protein; Provisional 99.62
PTZ00004378 actin-2; Provisional 99.61
PTZ00281376 actin; Provisional 99.6
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 99.53
KOG0679426 consensus Actin-related protein - Arp4p/Act3p [Cyt 99.51
TIGR03739320 PRTRC_D PRTRC system protein D. A novel genetic sy 99.45
PF11104340 PilM_2: Type IV pilus assembly protein PilM;; PDB: 99.44
COG4972354 PilM Tfp pilus assembly protein, ATPase PilM [Cell 99.25
COG5277444 Actin and related proteins [Cytoskeleton] 99.23
PF06406318 StbA: StbA protein; InterPro: IPR009440 This entry 99.2
PRK10719 475 eutA reactivating factor for ethanolamine ammonia 98.95
PF07520 1002 SrfB: Virulence factor SrfB; InterPro: IPR009216 T 98.88
KOG0676372 consensus Actin and related proteins [Cytoskeleton 98.76
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 98.67
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 98.56
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 98.54
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 98.52
PRK13317277 pantothenate kinase; Provisional 98.4
KOG0680400 consensus Actin-related protein - Arp6p [Cytoskele 98.18
KOG0677389 consensus Actin-related protein Arp2/3 complex, su 98.17
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 98.15
PF08841332 DDR: Diol dehydratase reactivase ATPase-like domai 98.0
COG4457 1014 SrfB Uncharacterized protein conserved in bacteria 97.79
KOG0797 618 consensus Actin-related protein [Cytoskeleton] 97.54
PF14574412 DUF4445: Domain of unknown function (DUF4445); PDB 97.52
KOG0681 645 consensus Actin-related protein - Arp5p [Cytoskele 97.48
TIGR00555279 panK_eukar pantothenate kinase, eukaryotic/staphyl 97.41
PF01869271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 97.33
COG1069544 AraB Ribulose kinase [Energy production and conver 97.33
PF06277 473 EutA: Ethanolamine utilisation protein EutA; Inter 97.25
TIGR02259432 benz_CoA_red_A benzoyl-CoA reductase, bcr type, su 97.21
PF02782198 FGGY_C: FGGY family of carbohydrate kinases, C-ter 96.99
TIGR01315541 5C_CHO_kinase FGGY-family pentulose kinase. This m 96.8
PRK15027484 xylulokinase; Provisional 96.69
KOG2517516 consensus Ribulose kinase and related carbohydrate 96.45
PRK00047498 glpK glycerol kinase; Provisional 96.38
PRK13321256 pantothenate kinase; Reviewed 96.36
PRK04123548 ribulokinase; Provisional 96.36
TIGR01312481 XylB D-xylulose kinase. D-xylulose kinase (XylB) g 96.34
PTZ00294504 glycerol kinase-like protein; Provisional 96.33
TIGR01311493 glycerol_kin glycerol kinase. This model describes 96.29
PRK10331470 L-fuculokinase; Provisional 96.2
PLN02669556 xylulokinase 96.19
TIGR02628465 fuculo_kin_coli L-fuculokinase. Members of this fa 96.12
TIGR01234536 L-ribulokinase L-ribulokinase. This enzyme catalyz 96.07
PLN02295512 glycerol kinase 96.06
COG1070502 XylB Sugar (pentulose and hexulose) kinases [Carbo 96.05
PRK10854 513 exopolyphosphatase; Provisional 95.93
TIGR01314505 gntK_FGGY gluconate kinase, FGGY type. Gluconate i 95.9
TIGR02627454 rhamnulo_kin rhamnulokinase. This model describes 95.89
PF14450120 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B 95.73
PRK10640471 rhaB rhamnulokinase; Provisional 95.72
PRK10939520 autoinducer-2 (AI-2) kinase; Provisional 95.7
smart00842187 FtsA Cell division protein FtsA. FtsA is essential 95.6
PRK09585365 anmK anhydro-N-acetylmuramic acid kinase; Reviewed 95.36
KOG0678415 consensus Actin-related protein Arp2/3 complex, su 95.3
KOG2531545 consensus Sugar (pentulose and hexulose) kinases [ 95.1
PRK11031 496 guanosine pentaphosphate phosphohydrolase; Provisi 95.05
PRK13318258 pantothenate kinase; Reviewed 94.95
PRK13320244 pantothenate kinase; Reviewed 94.95
COG4819 473 EutA Ethanolamine utilization protein, possible ch 94.86
TIGR03706300 exo_poly_only exopolyphosphatase. It appears that 94.49
PRK13326262 pantothenate kinase; Reviewed 94.45
TIGR00671243 baf pantothenate kinase, type III. This model desc 94.23
COG3426358 Butyrate kinase [Energy production and conversion] 94.11
COG1521251 Pantothenate kinase type III (Bvg accessory factor 94.08
TIGR03723314 bact_gcp putative glycoprotease GCP. This model re 93.69
TIGR00744318 ROK_glcA_fam ROK family protein (putative glucokin 93.51
COG0554499 GlpK Glycerol kinase [Energy production and conver 93.45
KOG0681645 consensus Actin-related protein - Arp5p [Cytoskele 92.95
PRK13324258 pantothenate kinase; Reviewed 92.82
PF14450120 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B 92.71
PRK13322246 pantothenate kinase; Reviewed 92.6
PF07318343 DUF1464: Protein of unknown function (DUF1464); In 92.56
COG1548330 Predicted transcriptional regulator/sugar kinase [ 91.75
PRK09557301 fructokinase; Reviewed 91.05
PRK14878323 UGMP family protein; Provisional 90.64
PF03702364 UPF0075: Uncharacterised protein family (UPF0075); 89.97
COG2971301 Predicted N-acetylglucosamine kinase [Carbohydrate 89.94
PRK13329249 pantothenate kinase; Reviewed 89.25
PTZ00340345 O-sialoglycoprotein endopeptidase-like protein; Pr 89.17
COG2377371 Predicted molecular chaperone distantly related to 88.92
COG2192 555 Predicted carbamoyl transferase, NodU family [Post 88.84
COG0248 492 GppA Exopolyphosphatase [Nucleotide transport and 88.69
PF08735254 DUF1786: Putative pyruvate format-lyase activating 88.66
PRK09604332 UGMP family protein; Validated 88.26
TIGR03281326 methan_mark_12 putative methanogenesis marker prot 88.11
KOG2708336 consensus Predicted metalloprotease with chaperone 86.33
PLN00130213 succinate dehydrogenase (SDH3); Provisional 86.27
PRK14101 638 bifunctional glucokinase/RpiR family transcription 84.79
PLN02405497 hexokinase 83.77
PRK09698302 D-allose kinase; Provisional 83.73
COG4012342 Uncharacterized protein conserved in archaea [Func 83.52
PLN02596490 hexokinase-like 83.49
PF02543 360 CmcH_NodU: Carbamoyltransferase; InterPro: IPR0036 82.68
TIGR00143711 hypF [NiFe] hydrogenase maturation protein HypF. A 82.4
PTZ00107464 hexokinase; Provisional 82.07
PRK00976326 hypothetical protein; Provisional 81.97
COG1940314 NagC Transcriptional regulator/sugar kinase [Trans 81.66
PF02541285 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I 80.65
PLN02914490 hexokinase 80.6
>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=3.8e-76  Score=558.51  Aligned_cols=374  Identities=38%  Similarity=0.615  Sum_probs=361.0

Q ss_pred             CCCceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccCCcceecHhHhhhhhcCcCchhhcchhh
Q 036352           84 SQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHL  163 (493)
Q Consensus        84 ~~~~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~  163 (493)
                      ..+.+|||||||||+||+++.+|+++++.|.+|+|       .+||.|+|+++ ++++|+.|.++...+|++++++.||+
T Consensus        34 ~~gtvigIdLGTTYsCVgV~kNgrvEIiANdQGNR-------ItPSyVaFt~d-erLiGdAAKNQ~~~NPenTiFD~KRL  105 (663)
T KOG0100|consen   34 KLGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNR-------ITPSYVAFTDD-ERLIGDAAKNQLTSNPENTIFDAKRL  105 (663)
T ss_pred             ccceEEEEecCCceeeEEEEeCCeEEEEecCCCCc-------cccceeeeccc-hhhhhhHhhcccccCcccceechHHH
Confidence            35789999999999999999999999999999999       99999999988 99999999999999999999999999


Q ss_pred             hCCCCCCchhhcc---cCCeEEeCCCCceEEEeC-----CeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Q 036352          164 VGTVYDSSKVQTS---LYPKIVRGFKGEAWVETE-----FGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFN  235 (493)
Q Consensus       164 lg~~~~~~~~~~~---~p~~~~~~~~g~~~~~~~-----~~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~~  235 (493)
                      ||+.++++.+|.+   +||+++. .++++.++++     .+.++|+++.+++|..|++.++.+++.++...|+|||+||+
T Consensus       106 IGr~~~d~~vq~Dik~~Pfkvv~-k~~kp~i~v~v~~g~~K~FtPeEiSaMiL~KMKe~AEayLGkkv~~AVvTvPAYFN  184 (663)
T KOG0100|consen  106 IGRKFNDKSVQKDIKFLPFKVVN-KDGKPYIQVKVGGGETKVFTPEEISAMILTKMKETAEAYLGKKVTHAVVTVPAYFN  184 (663)
T ss_pred             hCcccCChhhhhhhhcCceEEEc-CCCCccEEEEccCCcccccCHHHHHHHHHHHHHHHHHHHhCCcccceEEecchhcc
Confidence            9999999999998   8999886 5777777755     36899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCeeeeccchHHHHHHhcccCC--CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHH
Q 036352          236 EAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR--DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLD  312 (493)
Q Consensus       236 ~~~r~~l~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~  312 (493)
                      +.|||++++|...|||+++++|+||+|||++|+++++  +.++||+|+| ||+|+|++.++++.|+++++.|+.++||++
T Consensus       185 DAQrQATKDAGtIAgLnV~RIiNePTaAAIAYGLDKk~gEknilVfDLGGGTFDVSlLtIdnGVFeVlaTnGDThLGGED  264 (663)
T KOG0100|consen  185 DAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKKDGEKNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGED  264 (663)
T ss_pred             hHHHhhhcccceeccceEEEeecCccHHHHHhcccccCCcceEEEEEcCCceEEEEEEEEcCceEEEEecCCCcccCccc
Confidence            9999999999999999999999999999999999987  8899999999 999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccceEEEEcHHHHHH
Q 036352          313 FDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFES  392 (493)
Q Consensus       313 id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~e~  392 (493)
                      ||+++++|+.+.++++++.++.++.++..+|+++||++|+.||++.+..++|+++++|        .|++-++||..||+
T Consensus       265 FD~rvm~~fiklykkK~gkDv~kdnkA~~KLrRe~EkAKRaLSsqhq~riEIeS~fdG--------~DfSEtLtRAkFEE  336 (663)
T KOG0100|consen  265 FDQRVMEYFIKLYKKKHGKDVRKDNKAVQKLRREVEKAKRALSSQHQVRIEIESLFDG--------VDFSETLTRAKFEE  336 (663)
T ss_pred             hHHHHHHHHHHHHhhhcCCccchhhHHHHHHHHHHHHHHhhhccccceEEeeeecccc--------ccccchhhhhHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999        89999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHh-CCCCCCCCCCCChhHHHHhhHHHHHhhhc
Q 036352          393 LVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFF-GKSPLKSPRGVTPDEAVVIGAAIHGEKFR  471 (493)
Q Consensus       393 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-g~~~~~~~~~~~p~~aVA~GAa~~a~~~~  471 (493)
                      +--+++......++++|+.+++.+.+|+.|+||||++|+|.||++|+.+| |+.+.+   .+||++|||+|||.+|..++
T Consensus       337 lNmDLFr~TlkPv~kvl~Ds~lkKsdideiVLVGGsTrIPKvQqllk~fF~GKepsk---GinPdEAVAYGAAVQaGvls  413 (663)
T KOG0100|consen  337 LNMDLFRKTLKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEPSK---GINPDEAVAYGAAVQAGVLS  413 (663)
T ss_pred             hhhHHHHHhhHHHHHHHhhcCcccccCceEEEecCcccChhHHHHHHHHhCCCCccC---CCChHHHHHhhhhhhhcccc
Confidence            99999999999999999999999999999999999999999999999999 899998   99999999999999999999


Q ss_pred             ccCCCC
Q 036352          472 YVNRRE  477 (493)
Q Consensus       472 ~~~~~~  477 (493)
                      |.....
T Consensus       414 Gee~t~  419 (663)
T KOG0100|consen  414 GEEDTG  419 (663)
T ss_pred             cccCcC
Confidence            987554

>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>PTZ00400 DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>PTZ00009 heat shock 70 kDa protein; Provisional Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>TIGR01991 HscA Fe-S protein assembly chaperone HscA Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK01433 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11678 putative chaperone; Provisional Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>smart00268 ACTIN Actin Back     alignment and domain information
>PTZ00280 Actin-related protein 3; Provisional Back     alignment and domain information
>PTZ00452 actin; Provisional Back     alignment and domain information
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13917 plasmid segregation protein ParM; Provisional Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>PTZ00466 actin-like protein; Provisional Back     alignment and domain information
>PTZ00004 actin-2; Provisional Back     alignment and domain information
>PTZ00281 actin; Provisional Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>KOG0679 consensus Actin-related protein - Arp4p/Act3p [Cytoskeleton] Back     alignment and domain information
>TIGR03739 PRTRC_D PRTRC system protein D Back     alignment and domain information
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A Back     alignment and domain information
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>COG5277 Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA [] Back     alignment and domain information
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional Back     alignment and domain information
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function Back     alignment and domain information
>KOG0676 consensus Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>KOG0680 consensus Actin-related protein - Arp6p [Cytoskeleton] Back     alignment and domain information
>KOG0677 consensus Actin-related protein Arp2/3 complex, subunit Arp2 [Cytoskeleton] Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ] Back     alignment and domain information
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown] Back     alignment and domain information
>KOG0797 consensus Actin-related protein [Cytoskeleton] Back     alignment and domain information
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>COG1069 AraB Ribulose kinase [Energy production and conversion] Back     alignment and domain information
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon Back     alignment and domain information
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A Back     alignment and domain information
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase Back     alignment and domain information
>PRK15027 xylulokinase; Provisional Back     alignment and domain information
>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK00047 glpK glycerol kinase; Provisional Back     alignment and domain information
>PRK13321 pantothenate kinase; Reviewed Back     alignment and domain information
>PRK04123 ribulokinase; Provisional Back     alignment and domain information
>TIGR01312 XylB D-xylulose kinase Back     alignment and domain information
>PTZ00294 glycerol kinase-like protein; Provisional Back     alignment and domain information
>TIGR01311 glycerol_kin glycerol kinase Back     alignment and domain information
>PRK10331 L-fuculokinase; Provisional Back     alignment and domain information
>PLN02669 xylulokinase Back     alignment and domain information
>TIGR02628 fuculo_kin_coli L-fuculokinase Back     alignment and domain information
>TIGR01234 L-ribulokinase L-ribulokinase Back     alignment and domain information
>PLN02295 glycerol kinase Back     alignment and domain information
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10854 exopolyphosphatase; Provisional Back     alignment and domain information
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type Back     alignment and domain information
>TIGR02627 rhamnulo_kin rhamnulokinase Back     alignment and domain information
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T Back     alignment and domain information
>PRK10640 rhaB rhamnulokinase; Provisional Back     alignment and domain information
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional Back     alignment and domain information
>smart00842 FtsA Cell division protein FtsA Back     alignment and domain information
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed Back     alignment and domain information
>KOG0678 consensus Actin-related protein Arp2/3 complex, subunit Arp3 [Cytoskeleton] Back     alignment and domain information
>KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional Back     alignment and domain information
>PRK13318 pantothenate kinase; Reviewed Back     alignment and domain information
>PRK13320 pantothenate kinase; Reviewed Back     alignment and domain information
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03706 exo_poly_only exopolyphosphatase Back     alignment and domain information
>PRK13326 pantothenate kinase; Reviewed Back     alignment and domain information
>TIGR00671 baf pantothenate kinase, type III Back     alignment and domain information
>COG3426 Butyrate kinase [Energy production and conversion] Back     alignment and domain information
>COG1521 Pantothenate kinase type III (Bvg accessory factor family protein) [Transcription] Back     alignment and domain information
>TIGR03723 bact_gcp putative glycoprotease GCP Back     alignment and domain information
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) Back     alignment and domain information
>COG0554 GlpK Glycerol kinase [Energy production and conversion] Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>PRK13324 pantothenate kinase; Reviewed Back     alignment and domain information
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T Back     alignment and domain information
>PRK13322 pantothenate kinase; Reviewed Back     alignment and domain information
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length Back     alignment and domain information
>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09557 fructokinase; Reviewed Back     alignment and domain information
>PRK14878 UGMP family protein; Provisional Back     alignment and domain information
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P Back     alignment and domain information
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13329 pantothenate kinase; Reviewed Back     alignment and domain information
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional Back     alignment and domain information
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2192 Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PF08735 DUF1786: Putative pyruvate format-lyase activating enzyme (DUF1786); InterPro: IPR014846 This family is annotated as pyruvate formate-lyase activating enzyme (1 Back     alignment and domain information
>PRK09604 UGMP family protein; Validated Back     alignment and domain information
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12 Back     alignment and domain information
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN00130 succinate dehydrogenase (SDH3); Provisional Back     alignment and domain information
>PRK14101 bifunctional glucokinase/RpiR family transcriptional regulator; Provisional Back     alignment and domain information
>PLN02405 hexokinase Back     alignment and domain information
>PRK09698 D-allose kinase; Provisional Back     alignment and domain information
>COG4012 Uncharacterized protein conserved in archaea [Function unknown] Back     alignment and domain information
>PLN02596 hexokinase-like Back     alignment and domain information
>PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors [] Back     alignment and domain information
>TIGR00143 hypF [NiFe] hydrogenase maturation protein HypF Back     alignment and domain information
>PTZ00107 hexokinase; Provisional Back     alignment and domain information
>PRK00976 hypothetical protein; Provisional Back     alignment and domain information
>COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 Back     alignment and domain information
>PLN02914 hexokinase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
1dkg_D383 Crystal Structure Of The Nucleotide Exchange Factor 1e-66
2kho_A 605 Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAP 1e-66
4b9q_A 605 Open Conformation Of Atp-Bound Hsp70 Homolog Dnak L 7e-62
3qfp_A390 Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE D 6e-59
2v7y_A 509 Crystal Structure Of The Molecular Chaperone Dnak F 1e-58
3qfu_A394 Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXE 2e-58
3iuc_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-57
3ldl_A384 Crystal Structure Of Human Grp78 (70kda Heat Shock 6e-57
1ba1_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 2e-56
1nge_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 5e-56
3c7n_B 554 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 7e-56
3cqx_A386 Chaperone Complex Length = 386 7e-56
1ngf_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 9e-56
1hx1_A400 Crystal Structure Of A Bag Domain In Complex With T 1e-55
1hpm_A386 How Potassium Affects The Activity Of The Molecular 1e-55
2qw9_B394 Crystal Structure Of Bovine Hsc70 (1-394aa)in The A 1e-55
3fzf_A381 Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP 1e-55
1yuw_A 554 Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214 1e-55
2qwn_A394 Crystal Structure Of Disulfide-Bond-Crosslinked Com 1e-55
1qqm_A378 D199s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-55
1ba0_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 2e-55
1ngd_A386 Structural Basis Of The 70-kilodalton Heat Shock Co 2e-55
1ngb_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 2e-55
1nga_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 2e-55
1ngc_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 3e-55
1qqn_A378 D206s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 3e-55
1bup_A386 T13s Mutant Of Bovine 70 Kilodalton Heat Shock Prot 4e-55
1kaz_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71e 4e-55
1ngh_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 4e-55
1atr_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 5e-55
1kay_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71a 6e-55
1ats_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 6e-55
1kax_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71m 8e-55
2bup_A381 T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 8e-55
1ngg_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-54
2v7z_A 543 Crystal Structure Of The 70-Kda Heat Shock Cognate 2e-54
3jxu_A409 Crystal Structure Of The Human 70kda Heat Shock Pro 4e-54
1qqo_A378 E175s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 4e-54
3gl1_A387 Crystal Structure Of Atpase Domain Of Ssb1 Chaperon 2e-53
3a8y_A392 Crystal Structure Of The Complex Between The Bag5 B 3e-53
2e8a_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 3e-53
2e88_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 3e-53
3d2f_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 3e-53
1hjo_A380 Atpase Domain Of Human Heat Shock 70kda Protein 1 L 3e-53
1s3x_A382 The Crystal Structure Of The Human Hsp70 Atpase Dom 4e-53
3fe1_A403 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-52
3d2e_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70, 9e-52
3i33_A404 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-51
3gdq_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 2e-51
3kvg_A400 Crystal Structure Of The N-Terminal Domain Of Hsp70 1e-50
4fsv_A387 Crystal Structure Of A Heat Shock 70kda Protein 2 ( 7e-50
3d2f_A 675 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 3e-24
3c7n_A 668 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 3e-24
2qxl_A 658 Crystal Structure Analysis Of Sse1, A Yeast Hsp110 3e-24
3d2e_A 675 Crystal Structure Of A Complex Of Sse1p And Hsp70, 3e-23
1xqs_C191 Crystal Structure Of The Hspbp1 Core Domain Complex 2e-18
4gni_A409 Structure Of The Ssz1 Atpase Bound To Atp And Magne 2e-14
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 383 Back     alignment and structure 
Iteration: 1

 Score =  250 bits (639), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 154/392 (39%), Positives = 217/392 (55%), Gaps = 24/392 (6%)
Query: 86  GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQA 145
           G ++GIDLGTT S VA+M G  P V+E  EG R T       PS++ +  +GE+ VG+ A
Sbjct: 2   GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTT-------PSIIAYTQDGETLVGQPA 54
Query: 146 NMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAK 202
                  P   LF  K L+G  +   +VQ   S+ P KI+    G+AWVE +    +P +
Sbjct: 55  KRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQ 114
Query: 203 IQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVA 262
           I A +L KM+   E YL E  T+AVI+VPA FN+AQR+A K AG IAGL+++ ++ +P A
Sbjct: 115 ISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTA 174
Query: 263 AALAYGLDKRDG--LFAVYSF-GGTFEFSILEIS--NG--VIKVKAKRKSLSHGGLDFDL 315
           AALAYGLDK  G    AVY   GGTF+ SI+EI   +G    +V A       GG DFD 
Sbjct: 175 AALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234
Query: 316 LLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKS 375
            L+ +L  EF +    D  + PL +QR   AAE+AK+ LSS  Q +V L  +       +
Sbjct: 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYI----TADA 290
Query: 376 LVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKXXXXXXXXXXXXCVPSVR 435
              K + + +TR++ ESLV +L+  +  + +  L+ A ++               +P V+
Sbjct: 291 TGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQ 350
Query: 436 EYMELFFGKSPLKSPRGVTPDEAVVIGAAIHG 467
           + +  FFGK P K    V PDEAV IGAA+ G
Sbjct: 351 KKVAEFFGKEPRKD---VNPDEAVAIGAAVQG 379
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE (1-605) Complexed With Adp And Substrate Length = 605 Back     alignment and structure
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak Length = 605 Back     alignment and structure
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN Length = 390 Back     alignment and structure
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis State Length = 509 Back     alignment and structure
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP Length = 408 Back     alignment and structure
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5 BIP) Atpase Domain In Complex With Atp Length = 384 Back     alignment and structure
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal Mutant With Cys 17 Replaced By Lys Length = 386 Back     alignment and structure
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 554 Back     alignment and structure
>pdb|3CQX|A Chain A, Chaperone Complex Length = 386 Back     alignment and structure
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The Hsc70 Atpase Domain Length = 400 Back     alignment and structure
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular Chaperone Hsc70. Ii. Potassium Binds Specifically In The Atpase Active Site Length = 386 Back     alignment and structure
>pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo State Length = 394 Back     alignment and structure
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP Length = 381 Back     alignment and structure
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT Length = 554 Back     alignment and structure
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 394 Back     alignment and structure
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge 3 Length = 386 Back     alignment and structure
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 386 Back     alignment and structure
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant Length = 381 Back     alignment and structure
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant Length = 381 Back     alignment and structure
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant Length = 381 Back     alignment and structure
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 Length = 381 Back     alignment and structure
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein From Rattus Norvegicus In Post-Atp Hydrolysis State Length = 543 Back     alignment and structure
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a (Hsp70-1) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 409 Back     alignment and structure
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A Member Of The Hsp70 Family, From Saccharomyces Cerevisiae Length = 387 Back     alignment and structure
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And Hsp70 Nbd Length = 392 Back     alignment and structure
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In Complex With Amp-Pnp Length = 391 Back     alignment and structure
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The Apo Form Length = 391 Back     alignment and structure
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 382 Back     alignment and structure
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1 Length = 380 Back     alignment and structure
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain Length = 382 Back     alignment and structure
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6 (Hsp70b') Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 403 Back     alignment and structure
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 382 Back     alignment and structure
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2 (Hsp70-2) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 404 Back     alignment and structure
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1-Like Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 408 Back     alignment and structure
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 (Cgd2_20) From Cryptosporidium Parvum In Complex With Amppnp Length = 400 Back     alignment and structure
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2) From Homo Sapiens At 1.80 A Resolution Length = 387 Back     alignment and structure
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 675 Back     alignment and structure
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 668 Back     alignment and structure
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110 Length = 658 Back     alignment and structure
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 675 Back     alignment and structure
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With The Fragment Of Hsp70 Atpase Domain Length = 191 Back     alignment and structure
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium Length = 409 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 1e-120
2kho_A 605 Heat shock protein 70; molecular chaperone, HSP70, 1e-116
2v7y_A 509 Chaperone protein DNAK; HSP70, heat shock protein, 1e-105
1yuw_A 554 Heat shock cognate 71 kDa protein; chaperone; 2.60 1e-103
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 1e-103
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 1e-103
3d2f_A 675 Heat shock protein homolog SSE1; nucleotide exchan 1e-101
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 2e-19
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 2e-13
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 4e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Length = 383 Back     alignment and structure
 Score =  355 bits (913), Expect = e-120
 Identities = 163/398 (40%), Positives = 227/398 (57%), Gaps = 36/398 (9%)

Query: 86  GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVG--- 142
           G ++GIDLGTT S VA+M G  P V+E  EG R T       PS++ +  +GE+ VG   
Sbjct: 2   GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTT-------PSIIAYTQDGETLVGQPA 54

Query: 143 -RQA--NMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFG 196
            RQA  N      P   LF  K L+G  +   +VQ   S+ P KI+    G+AWVE +  
Sbjct: 55  KRQAVTN------PQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQ 108

Query: 197 IFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGV 256
             +P +I A +L KM+   E YL E  T+AVI+VPA FN+AQR+A K AG IAGL+++ +
Sbjct: 109 KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRI 168

Query: 257 VEDPVAAALAYGLDKRDG--LFAVYSF-GGTFEFSILEIS----NGVIKVKAKRKSLSHG 309
           + +P AAALAYGLDK  G    AVY   GGTF+ SI+EI         +V A       G
Sbjct: 169 INEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLG 228

Query: 310 GLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLN 369
           G DFD  L+ +L  EF +    D  + PL +QR   AAE+AK+ LSS  Q +V   NL  
Sbjct: 229 GEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDV---NLPY 285

Query: 370 IQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLG 429
           I    +   K + + +TR++ ESLV +L+  +  + +  L+ A ++  D+D +++VGG  
Sbjct: 286 ITADAT-GPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQT 344

Query: 430 CVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHG 467
            +P V++ +  FFGK P K    V PDEAV IGAA+ G
Sbjct: 345 RMPMVQKKVAEFFGKEPRK---DVNPDEAVAIGAAVQG 379
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Length = 605 Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Length = 509 Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Length = 554 Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ... Length = 404 Back     alignment and structure
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Length = 675 Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Length = 272 Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Length = 320 Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Length = 346 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query493
4b9q_A 605 Chaperone protein DNAK; HET: ATP; 2.40A {Escherich 100.0
3d2f_A 675 Heat shock protein homolog SSE1; nucleotide exchan 100.0
2kho_A 605 Heat shock protein 70; molecular chaperone, HSP70, 100.0
1yuw_A 554 Heat shock cognate 71 kDa protein; chaperone; 2.60 100.0
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 100.0
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 100.0
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 100.0
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 100.0
2v7y_A 509 Chaperone protein DNAK; HSP70, heat shock protein, 100.0
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 100.0
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 99.95
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 99.94
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 99.94
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 99.94
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 99.94
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 99.94
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 99.87
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 99.83
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 99.73
3js6_A355 Uncharacterized PARM protein; partition, segregati 99.72
3qb0_A 498 Actin-related protein 4; actin fold, ATP binding, 99.7
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 99.69
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 99.69
4fo0_A 593 Actin-related protein 8; chromatin remodeling, nuc 99.56
2d0o_A610 DIOL dehydratase-reactivating factor large subunit 99.36
1nbw_A607 Glycerol dehydratase reactivase alpha subunit; mol 99.34
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 98.8
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 98.2
4am6_A 655 Actin-like protein ARP8; nuclear protein, chromati 98.09
2ivn_A330 O-sialoglycoprotein endopeptidase; UP1 keops compl 97.0
3eno_A334 Putative O-sialoglycoprotein endopeptidase; hydrol 96.97
3l0q_A554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 96.9
3hz6_A511 Xylulokinase; xylulose, structural genomic, chromo 96.68
3ll3_A504 Gluconate kinase; xylulose kinase, nysgx, ATP, ADP 96.68
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 96.68
2zf5_O497 Glycerol kinase; hyperthermophilic archaeon, ATP-b 96.63
4bc3_A538 Xylulose kinase; transferase, glucuronate xyluloki 96.61
3vgl_A321 Glucokinase; ROK family, transferase; HET: BGC ANP 96.52
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 96.52
3ezw_A526 Glycerol kinase; glycerol metabolism, allosteric r 96.43
3g25_A501 Glycerol kinase; IDP00743, ATP-binding, glycerol m 96.43
3h3n_X506 Glycerol kinase; ATP-binding, glycerol metabolism, 96.29
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 96.27
4e1j_A520 Glycerol kinase; structural genomics, PSI-biology, 96.27
3ifr_A508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 96.26
1t6c_A315 Exopolyphosphatase; alpha/beta protein, actin-like 96.25
2p3r_A510 Glycerol kinase; glycerol metabolism, allosteric r 96.24
3jvp_A572 Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su 96.23
2e2o_A299 Hexokinase; acetate and sugar kinases, HSP70, acti 96.23
3vov_A302 Glucokinase, hexokinase; ROK, sugar kinase, transf 96.2
3r8e_A321 Hypothetical sugar kinase; ribonuclease H-like mot 96.11
2dpn_A495 Glycerol kinase; thermus thermophilus HB8, structu 96.08
3zyy_X631 Iron-sulfur cluster binding protein; iron-sulfur-b 96.0
2d4w_A504 Glycerol kinase; alpha and beta protein, ribonucle 95.97
2qm1_A326 Glucokinase; alpha-beta structure, putative helix- 95.92
2w40_A503 Glycerol kinase, putative; closed conformation, ma 95.88
3bex_A249 Type III pantothenate kinase; actin-like fold, ATP 95.82
3mdq_A315 Exopolyphosphatase; structural genomics, joint cen 95.75
3djc_A266 Type III pantothenate kinase; structural genomics, 95.72
2ch5_A347 NAGK protein; transferase, N-acetylglucosamine, gl 95.46
3en9_A 540 Glycoprotease, O-sialoglycoprotein endopeptidase/p 95.43
4db3_A327 Glcnac kinase, N-acetyl-D-glucosamine kinase; stru 95.26
2uyt_A489 Rhamnulokinase; rhamnose degradation, IN-LINE phos 94.73
3cer_A343 Possible exopolyphosphatase-like protein; NESG, BL 94.49
2ap1_A327 Putative regulator protein; zinc binding protein, 94.06
1z6r_A406 MLC protein; transcriptional repressor, ROK family 93.9
1u6z_A 513 Exopolyphosphatase; alpha/beta protein, askha (ace 93.58
2h3g_X268 Biosynthetic protein; pantothenate kinase, anthrax 92.51
3h6e_A482 Carbohydrate kinase, FGGY; novosphingobium aromati 92.18
3cet_A334 Conserved archaeal protein; Q6M145, MRR63, NESG, X 92.07
4g9i_A772 Hydrogenase maturation protein HYPF; zinc finger, 88.91
3hi0_A 508 Putative exopolyphosphatase; 17739545, structural 88.57
3o8m_A485 Hexokinase; rnaseh-like fold, glycolysis, glucose 88.34
3vth_A761 Hydrogenase maturation factor; carbamoyltransfer, 87.44
3cqy_A370 Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1 86.51
3ttc_A657 HYPF, transcriptional regulatory protein; Zn finge 86.44
1sz2_A332 Glucokinase, glucose kinase; ATP-dependent, glucos 85.5
2yhx_A457 Hexokinase B; transferase(phosphoryl,alcohol accep 84.72
3epq_A302 Putative fructokinase; SCRK, ADP binding, PSI2, MC 82.07
1bdg_A451 Hexokinase; phosphotransferase; HET: GLC; 2.60A {S 81.4
3ven_A 576 O-carbamoyltransferase TOBZ; antibiotic biosynthes 80.62
4htl_A297 Beta-glucoside kinase; structural genomics, sugar 80.41
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D Back     alignment and structure
Probab=100.00  E-value=4.4e-65  Score=545.79  Aligned_cols=375  Identities=41%  Similarity=0.642  Sum_probs=355.8

Q ss_pred             CceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccCCcceecHhHhhhhhcCcCchhhcchhhhC
Q 036352           86 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVG  165 (493)
Q Consensus        86 ~~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg  165 (493)
                      +.+||||||||||+||++.+|.|+++.|..|++       ++||+|+|.++|+++||..|..+...+|.++++++|+++|
T Consensus         2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~-------~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG   74 (605)
T 4b9q_A            2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDR-------TTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIG   74 (605)
T ss_dssp             CCEEEEECCSSEEEEEEEETTEEEECCCTTSCS-------SEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTT
T ss_pred             CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCc-------ccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhC
Confidence            469999999999999999999999999999999       9999999998889999999999999999999999999999


Q ss_pred             CCCCCchhhcc---cCCeEEeCCCCceEEEeCCeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHH
Q 036352          166 TVYDSSKVQTS---LYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAI  242 (493)
Q Consensus       166 ~~~~~~~~~~~---~p~~~~~~~~g~~~~~~~~~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~~~~~r~~l  242 (493)
                      +.++++.++.+   +||++...++|.+.+.++++.++|+++++++|++|++.++.+++.++..+|||||++|++.||+++
T Consensus        75 ~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~  154 (605)
T 4b9q_A           75 RRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQAT  154 (605)
T ss_dssp             CBTTSHHHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred             CCCCCHHHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence            99999988876   899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCeeeeccchHHHHHHhcccCC--CCeEEEEEeC-CeeEEEEEEEeC----CeEEEEEecCCCCCchHHHHH
Q 036352          243 KYAGDIAGLDIQGVVEDPVAAALAYGLDKR--DGLFAVYSFG-GTFEFSILEISN----GVIKVKAKRKSLSHGGLDFDL  315 (493)
Q Consensus       243 ~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~vlVvDiG-gTtdvsv~~~~~----~~~~vl~~~~~~~~GG~~id~  315 (493)
                      ++|++.||++++++++||+|||++|+....  +.+++|||+| ||+|++++++.+    +.++++++.++..+||++||+
T Consensus       155 ~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~  234 (605)
T 4b9q_A          155 KDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS  234 (605)
T ss_dssp             HHHHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHH
T ss_pred             HHHHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHH
Confidence            999999999999999999999999988764  6799999999 999999999988    899999999999999999999


Q ss_pred             HHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccceEEEEcHHHHHHHHH
Q 036352          316 LLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVS  395 (493)
Q Consensus       316 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~  395 (493)
                      .|++|+..+|+++++.++..+++.+.+|+.+||++|+.|+......+.++.+..+.    .++.++.++|+|++|+++++
T Consensus       235 ~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~----~g~~~~~~~itr~~~e~l~~  310 (605)
T 4b9q_A          235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADA----TGPKHMNIKVTRAKLESLVE  310 (605)
T ss_dssp             HHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECS----SSEEEEEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCC----CCCeeEEEEEeHHHHHHHHH
Confidence            99999999999999999989999999999999999999999999999888765431    23467889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhcccC
Q 036352          396 ELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVN  474 (493)
Q Consensus       396 ~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~  474 (493)
                      ++++++...++++|+.+++...+|+.|+||||+|++|+|++.|++.||.++..   +.||+++||.|||++|+.++|..
T Consensus       311 ~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~---~~nPdeaVA~GAai~a~~l~~~~  386 (605)
T 4b9q_A          311 DLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRK---DVNPDEAVAIGAAVQGGVLTGDV  386 (605)
T ss_dssp             HHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCS---SSCTTTHHHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCC---CcChhHHHHHhHHHHHHHhcCCC
Confidence            99999999999999999999899999999999999999999999999999988   99999999999999999999874
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Back     alignment and structure
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} Back     alignment and structure
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A Back     alignment and structure
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* Back     alignment and structure
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* Back     alignment and structure
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Back     alignment and structure
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Back     alignment and structure
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Back     alignment and structure
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} Back     alignment and structure
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* Back     alignment and structure
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Back     alignment and structure
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* Back     alignment and structure
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* Back     alignment and structure
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Back     alignment and structure
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* Back     alignment and structure
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* Back     alignment and structure
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} Back     alignment and structure
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} Back     alignment and structure
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} Back     alignment and structure
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans} Back     alignment and structure
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} Back     alignment and structure
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} Back     alignment and structure
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* Back     alignment and structure
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A Back     alignment and structure
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} Back     alignment and structure
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp} Back     alignment and structure
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Back     alignment and structure
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Back     alignment and structure
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} Back     alignment and structure
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* Back     alignment and structure
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} Back     alignment and structure
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10 Back     alignment and structure
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A Back     alignment and structure
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* Back     alignment and structure
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str} Back     alignment and structure
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A Back     alignment and structure
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis} Back     alignment and structure
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} Back     alignment and structure
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* Back     alignment and structure
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A Back     alignment and structure
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis} Back     alignment and structure
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A Back     alignment and structure
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A* Back     alignment and structure
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A Back     alignment and structure
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3 Back     alignment and structure
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A* Back     alignment and structure
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 493
d1dkgd1183 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPas 3e-50
d1dkgd2198 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATP 2e-46
d1bupa1185 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPas 3e-45
d1bupa2193 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATP 7e-42
d1jcea1137 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB 2e-16
d1jcea2196 c.55.1.1 (A:141-336) Prokaryotic actin homolog Mre 2e-16
d2zgya2163 c.55.1.1 (A:158-320) Plasmid segregation protein P 2e-13
d2fsja1161 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 7e-10
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 183 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

 Score =  167 bits (425), Expect = 3e-50
 Identities = 84/187 (44%), Positives = 115/187 (61%), Gaps = 10/187 (5%)

Query: 88  VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANM 147
           ++GIDLGTT S VA+M G  P V+E  EG R T       PS++ +  +GE+ VG+ A  
Sbjct: 2   IIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTT-------PSIIAYTQDGETLVGQPAKR 54

Query: 148 MTSLYPSRALFDTKHLVGTVYDSSKVQT--SLYP-KIVRGFKGEAWVETEFGIFSPAKIQ 204
                P   LF  K L+G  +   +VQ   S+ P KI+    G+AWVE +    +P +I 
Sbjct: 55  QAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQIS 114

Query: 205 AFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAA 264
           A +L KM+   E YL E  T+AVI+VPA FN+AQR+A K AG IAGL+++ ++ +P AAA
Sbjct: 115 AEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAA 174

Query: 265 LAYGLDK 271
           LAYGLDK
Sbjct: 175 LAYGLDK 181
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 198 Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 185 Back     information, alignment and structure
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 193 Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 137 Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 196 Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Length = 163 Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 161 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query493
d1dkgd2198 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1dkgd1183 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1bupa1185 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1jcea1137 Prokaryotic actin homolog MreB {Thermotoga maritim 99.83
d1jcea2196 Prokaryotic actin homolog MreB {Thermotoga maritim 99.8
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 99.57
d2zgya2163 Plasmid segregation protein ParM {Escherichia coli 99.46
d2fsja1161 Hypothetical protein Ta0583 {Archaeon Thermoplasma 99.26
d1huxa_259 Hydroxyglutaryl-CoA dehydratase component A {Acida 98.73
d2fxua2225 Actin {Cow (Bos taurus) [TaxId: 9913]} 98.33
d1k8ka2258 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 98.26
d1k8kb1190 Actin-related protein 2, Arp2 {Cow (Bos taurus) [T 98.07
d1k8ka1158 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 97.59
d2fxua1140 Actin {Cow (Bos taurus) [TaxId: 9913]} 97.54
d1nbwa3202 ATPase domain of the glycerol dehydratase reactiva 97.42
d2d0oa3203 Diol dehydratase-reactivating factor large subunit 97.39
d1e4ft1193 Cell division protein FtsA {Thermotoga maritima [T 96.74
d2p3ra2247 Glycerol kinase {Escherichia coli [TaxId: 562]} 96.53
d1r59o2235 Glycerol kinase {Enterococcus casseliflavus [TaxId 96.34
d1zc6a1114 Probable N-acetylglucosamine kinase CV2896 {Chromo 96.09
d2fsja2164 Hypothetical protein Ta0583 {Archaeon Thermoplasma 95.89
d2i7na2212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 95.59
d1sz2a1319 Glucokinase Glk {Escherichia coli [TaxId: 562]} 93.86
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 93.22
d2zgya1157 Plasmid segregation protein ParM {Escherichia coli 92.75
d2ch5a2117 N-acetylglucosamine kinase, NAGK {Human (Homo sapi 92.69
d2p3ra1252 Glycerol kinase {Escherichia coli [TaxId: 562]} 85.49
d1woqa1129 Inorganic polyphosphate/ATP-glucomannokinase PPGMK 83.9
d1nu0a_138 Hypothetical protein YqgF (RuvX) {Escherichia coli 83.52
d1iv0a_98 Hypothetical protein, YqgF homologue {Thermus ther 81.02
d1t6ca2180 Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 80.83
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

Probab=100.00  E-value=2.8e-36  Score=275.49  Aligned_cols=191  Identities=38%  Similarity=0.594  Sum_probs=176.7

Q ss_pred             CeEEEEEeC-CeeEEEEEEEe----CCeEEEEEecCCCCCchHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHH
Q 036352          274 GLFAVYSFG-GTFEFSILEIS----NGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAE  348 (493)
Q Consensus       274 ~~vlVvDiG-gTtdvsv~~~~----~~~~~vl~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e  348 (493)
                      .+|||||+| ||+|+|++++.    ++.++++++.++..+||++||+.|++++.++|.++++.++..+++.+.+|+++||
T Consensus         3 ~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~~e   82 (198)
T d1dkgd2           3 RTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAE   82 (198)
T ss_dssp             EEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHH
T ss_pred             eEEEEEEcCCCcEEEEEEEEEccCCCcEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHH
Confidence            479999999 99999999997    4568999999989999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCceEEEEecccchhhhccccccceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCC
Q 036352          349 RAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGL  428 (493)
Q Consensus       349 ~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~  428 (493)
                      ++|+.||.+.+.++.+|.+..+.    .++.++.++|||++|+++++|+++++.++|+++|++++++..+|+.|+|+||+
T Consensus        83 ~~K~~Ls~~~~~~i~~~~~~~~~----~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~a~~~~~~Id~v~lvGG~  158 (198)
T d1dkgd2          83 KAKIELSSAQQTDVNLPYITADA----TGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQ  158 (198)
T ss_dssp             HHHHHTTSSSEEEEEEEEEEEET----TEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGG
T ss_pred             HHHHHhcCCCeEEEEEeeeecCC----CCCceEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHCcEEEEEcCc
Confidence            99999999999999998765542    13357789999999999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhc
Q 036352          429 GCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFR  471 (493)
Q Consensus       429 s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~  471 (493)
                      |++|+|++.|++.||.++..   +.||++|||.|||++|+.++
T Consensus       159 sr~p~l~~~i~~~f~~~~~~---~~~p~~aVa~GAa~~aa~lS  198 (198)
T d1dkgd2         159 TRMPMVQKKVAEFFGKEPRK---DVNPDEAVAIGAAVQGGVLT  198 (198)
T ss_dssp             GGSHHHHHHHHHHHSSCCBC---SSCTTTHHHHHHHHHTTTTC
T ss_pred             cCCHHHHHHHHHHHCCCCCC---CCChHHHHHHHHHHHHHhcC
Confidence            99999999999999988887   89999999999999999875
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]} Back     information, alignment and structure
>d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure
>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Back     information, alignment and structure
>d2fsja2 c.55.1.12 (A:1-164) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2zgya1 c.55.1.1 (A:1-157) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]} Back     information, alignment and structure
>d1nu0a_ c.55.3.8 (A:) Hypothetical protein YqgF (RuvX) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure